Query 006442
Match_columns 645
No_of_seqs 479 out of 4729
Neff 7.6
Searched_HMMs 46136
Date Thu Mar 28 23:19:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006442.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006442hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0488 Uup ATPase components 100.0 7.4E-98 2E-102 823.2 58.7 522 96-632 2-527 (530)
2 PRK10636 putative ABC transpor 100.0 4E-90 8.6E-95 790.7 63.7 516 97-630 1-517 (638)
3 PRK11147 ABC transporter ATPas 100.0 3.9E-89 8.5E-94 784.0 65.2 521 97-630 3-528 (635)
4 PRK11819 putative ABC transpor 100.0 5.7E-87 1.2E-91 756.0 66.3 526 96-633 5-536 (556)
5 PRK15064 ABC transporter ATP-b 100.0 1.8E-86 3.9E-91 749.0 64.5 524 97-631 1-526 (530)
6 KOG0927 Predicted transporter 100.0 5.2E-88 1.1E-92 713.2 45.5 526 91-633 69-599 (614)
7 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 7.6E-86 1.6E-90 746.6 65.7 526 96-633 3-534 (552)
8 PLN03073 ABC transporter F fam 100.0 1.9E-83 4.2E-88 738.1 63.6 520 94-631 174-715 (718)
9 COG1123 ATPase components of v 100.0 2E-81 4.4E-86 679.6 46.3 454 96-631 4-520 (539)
10 PRK10261 glutathione transport 100.0 4.6E-81 9.9E-86 715.3 51.0 471 95-629 10-552 (623)
11 PRK13549 xylose transporter AT 100.0 1.5E-81 3.2E-86 705.2 44.2 442 96-628 4-492 (506)
12 PRK09700 D-allose transporter 100.0 9E-81 2E-85 699.8 46.8 442 96-621 4-490 (510)
13 TIGR03269 met_CoM_red_A2 methy 100.0 5.8E-80 1.3E-84 694.8 51.0 431 98-629 1-516 (520)
14 PRK15439 autoinducer 2 ABC tra 100.0 3.7E-80 7.9E-85 693.9 49.0 441 95-628 9-490 (510)
15 PRK15134 microcin C ABC transp 100.0 4.8E-80 1E-84 696.6 48.7 445 96-630 4-515 (529)
16 PRK10762 D-ribose transporter 100.0 2.6E-80 5.6E-85 694.3 44.8 432 96-620 3-475 (501)
17 TIGR02633 xylG D-xylose ABC tr 100.0 3.8E-80 8.3E-85 693.3 46.1 436 98-621 2-484 (500)
18 PRK11288 araG L-arabinose tran 100.0 5E-80 1.1E-84 692.0 44.8 441 96-629 3-484 (501)
19 PRK10982 galactose/methyl gala 100.0 5.8E-79 1.3E-83 682.0 44.5 430 100-621 1-472 (491)
20 PRK10938 putative molybdenum t 100.0 8.2E-79 1.8E-83 680.9 44.0 435 97-622 3-485 (490)
21 KOG0062 ATPase component of AB 100.0 2.4E-77 5.3E-82 629.0 36.8 496 95-639 78-578 (582)
22 KOG0055 Multidrug/pheromone ex 100.0 4.5E-76 9.7E-81 678.3 48.8 539 50-630 305-1213(1228)
23 KOG0054 Multidrug resistance-a 100.0 6.3E-75 1.4E-79 683.6 44.8 547 24-629 453-1361(1381)
24 COG4172 ABC-type uncharacteriz 100.0 1.7E-73 3.6E-78 583.6 41.8 448 95-632 4-518 (534)
25 PRK13409 putative ATPase RIL; 100.0 4.2E-73 9E-78 641.8 42.2 420 102-620 78-533 (590)
26 KOG0066 eIF2-interacting prote 100.0 4.8E-73 1E-77 582.0 36.6 517 95-633 262-794 (807)
27 PLN03130 ABC transporter C fam 100.0 7.1E-72 1.5E-76 690.0 52.9 485 97-631 614-1462(1622)
28 PLN03232 ABC transporter C fam 100.0 2.6E-71 5.6E-76 684.7 49.5 205 419-630 1229-1458(1495)
29 TIGR00957 MRP_assoc_pro multi 100.0 2E-70 4.4E-75 677.7 54.5 208 418-631 1278-1509(1522)
30 COG1129 MglA ABC-type sugar tr 100.0 6.2E-71 1.3E-75 594.4 39.2 433 95-620 6-481 (500)
31 PTZ00265 multidrug resistance 100.0 1.6E-66 3.5E-71 637.0 54.8 204 423-630 1164-1452(1466)
32 PTZ00243 ABC transporter; Prov 100.0 2.6E-66 5.7E-71 639.8 55.0 203 422-630 1306-1533(1560)
33 TIGR01271 CFTR_protein cystic 100.0 3E-66 6.4E-71 638.8 55.4 206 418-630 1211-1440(1490)
34 COG3845 ABC-type uncharacteriz 100.0 4E-67 8.6E-72 553.2 39.3 437 96-620 3-483 (501)
35 TIGR01257 rim_protein retinal- 100.0 2E-62 4.3E-67 600.4 58.3 207 423-633 1936-2162(2272)
36 TIGR00956 3a01205 Pleiotropic 100.0 2.6E-59 5.6E-64 573.0 47.9 198 423-624 758-987 (1394)
37 PLN03140 ABC transporter G fam 100.0 1.6E-56 3.5E-61 546.5 45.4 198 424-625 867-1105(1470)
38 COG1126 GlnQ ABC-type polar am 100.0 9.2E-52 2E-56 395.2 22.0 210 97-346 2-225 (240)
39 COG1245 Predicted ATPase, RNas 100.0 3.8E-50 8.3E-55 417.1 33.5 434 102-615 79-531 (591)
40 COG1126 GlnQ ABC-type polar am 100.0 4.5E-50 9.7E-55 383.6 22.4 205 423-631 1-226 (240)
41 COG1116 TauB ABC-type nitrate/ 100.0 9.1E-49 2E-53 385.6 21.2 196 97-332 3-207 (248)
42 COG1125 OpuBA ABC-type proline 100.0 9.8E-49 2.1E-53 381.3 19.2 210 97-346 1-225 (309)
43 COG1135 AbcC ABC-type metal io 100.0 1.3E-47 2.9E-52 384.2 21.4 207 97-344 1-229 (339)
44 COG1127 Ttg2A ABC-type transpo 100.0 3.4E-47 7.4E-52 369.2 22.4 218 95-351 6-240 (263)
45 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.1E-46 2.5E-51 375.7 22.4 212 96-345 3-226 (254)
46 COG1125 OpuBA ABC-type proline 100.0 1.6E-46 3.4E-51 365.9 20.6 203 424-629 1-224 (309)
47 COG1120 FepC ABC-type cobalami 100.0 2.6E-46 5.7E-51 375.1 20.5 210 97-343 2-225 (258)
48 COG3842 PotA ABC-type spermidi 100.0 3E-46 6.4E-51 390.4 20.8 214 96-349 4-229 (352)
49 COG1136 SalX ABC-type antimicr 100.0 1.3E-45 2.9E-50 363.1 23.4 197 98-334 2-220 (226)
50 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.2E-45 2.5E-50 368.5 22.5 205 423-630 3-227 (254)
51 COG1120 FepC ABC-type cobalami 100.0 7.6E-46 1.6E-50 371.8 21.1 202 424-629 2-227 (258)
52 COG3839 MalK ABC-type sugar tr 100.0 8.4E-46 1.8E-50 385.0 21.9 210 97-347 3-224 (338)
53 COG1116 TauB ABC-type nitrate/ 100.0 8.1E-46 1.7E-50 364.8 20.4 191 423-616 2-207 (248)
54 COG1118 CysA ABC-type sulfate/ 100.0 4.6E-46 9.9E-51 372.2 18.3 211 97-346 2-227 (345)
55 COG1124 DppF ABC-type dipeptid 100.0 2.1E-45 4.5E-50 358.5 21.0 200 96-336 2-222 (252)
56 COG1135 AbcC ABC-type metal io 100.0 1.8E-45 4E-50 368.8 20.0 202 424-629 1-230 (339)
57 COG1127 Ttg2A ABC-type transpo 100.0 5.4E-45 1.2E-49 353.9 21.2 206 422-630 6-235 (263)
58 COG1124 DppF ABC-type dipeptid 100.0 7.4E-45 1.6E-49 354.6 20.6 206 423-629 2-230 (252)
59 COG3638 ABC-type phosphate/pho 100.0 1.8E-44 3.9E-49 349.3 21.3 215 96-343 2-234 (258)
60 COG2884 FtsE Predicted ATPase 100.0 1.1E-44 2.5E-49 338.9 18.6 201 97-337 1-218 (223)
61 PRK13537 nodulation ABC transp 100.0 9E-44 1.9E-48 373.7 26.3 207 96-343 6-224 (306)
62 COG1122 CbiO ABC-type cobalt t 100.0 5.8E-44 1.3E-48 357.8 22.7 208 96-344 2-226 (235)
63 PRK00349 uvrA excinuclease ABC 100.0 6E-43 1.3E-47 408.4 34.9 338 234-630 465-927 (943)
64 TIGR02314 ABC_MetN D-methionin 100.0 9.3E-44 2E-48 377.2 25.4 207 97-344 1-228 (343)
65 TIGR00960 3a0501s02 Type II (G 100.0 8.6E-44 1.9E-48 356.1 22.9 197 97-333 1-215 (216)
66 COG3842 PotA ABC-type spermidi 100.0 3.5E-44 7.6E-49 374.8 20.0 203 422-628 3-224 (352)
67 PRK11650 ugpC glycerol-3-phosp 100.0 1.7E-43 3.8E-48 377.9 25.9 208 97-345 3-223 (356)
68 cd03261 ABC_Org_Solvent_Resist 100.0 1.7E-43 3.7E-48 358.5 24.6 206 98-343 1-223 (235)
69 PRK11432 fbpC ferric transport 100.0 2.3E-43 5E-48 376.0 26.2 209 96-345 5-225 (351)
70 COG3638 ABC-type phosphate/pho 100.0 7.8E-44 1.7E-48 344.9 20.1 205 423-631 2-238 (258)
71 cd03259 ABC_Carb_Solutes_like 100.0 1.7E-43 3.8E-48 353.1 23.0 198 98-335 1-210 (213)
72 TIGR03265 PhnT2 putative 2-ami 100.0 3.9E-43 8.4E-48 374.8 26.1 208 97-345 4-223 (353)
73 PRK13536 nodulation factor exp 100.0 6.8E-43 1.5E-47 371.1 27.4 209 94-343 38-258 (340)
74 COG3839 MalK ABC-type sugar tr 100.0 2.1E-43 4.6E-48 367.1 22.4 202 424-628 3-222 (338)
75 COG4555 NatA ABC-type Na+ tran 100.0 7.5E-44 1.6E-48 336.1 17.2 208 97-345 1-221 (245)
76 COG1136 SalX ABC-type antimicr 100.0 4E-43 8.6E-48 345.6 22.8 193 424-619 1-221 (226)
77 COG1131 CcmA ABC-type multidru 100.0 5.4E-43 1.2E-47 364.8 25.2 206 97-343 4-223 (293)
78 COG1122 CbiO ABC-type cobalt t 100.0 2.2E-43 4.9E-48 353.6 21.5 206 423-631 2-229 (235)
79 cd03265 ABC_DrrA DrrA is the A 100.0 6.4E-43 1.4E-47 350.8 24.6 198 98-335 1-211 (220)
80 TIGR00630 uvra excinuclease AB 100.0 3.4E-42 7.3E-47 401.4 34.3 328 242-627 470-922 (924)
81 PRK09452 potA putrescine/sperm 100.0 7.3E-43 1.6E-47 374.7 26.6 212 94-346 11-234 (375)
82 PRK11607 potG putrescine trans 100.0 1.4E-42 3E-47 373.1 27.4 211 95-346 17-239 (377)
83 COG1118 CysA ABC-type sulfate/ 100.0 1.6E-43 3.4E-48 354.0 18.6 203 424-630 2-227 (345)
84 TIGR01288 nodI ATP-binding ABC 100.0 8.9E-43 1.9E-47 366.3 25.4 206 97-343 4-221 (303)
85 PRK00635 excinuclease ABC subu 100.0 5.9E-42 1.3E-46 414.5 35.1 328 243-630 460-906 (1809)
86 TIGR03258 PhnT 2-aminoethylpho 100.0 1E-42 2.2E-47 372.2 25.2 209 97-346 5-228 (362)
87 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 6.4E-43 1.4E-47 350.2 22.2 195 98-333 1-217 (218)
88 cd03301 ABC_MalK_N The N-termi 100.0 9.3E-43 2E-47 347.8 23.2 198 98-335 1-210 (213)
89 PRK11000 maltose/maltodextrin 100.0 1.2E-42 2.7E-47 373.6 25.8 207 97-344 3-221 (369)
90 TIGR02673 FtsE cell division A 100.0 8.9E-43 1.9E-47 348.2 22.9 197 97-333 1-214 (214)
91 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.5E-42 3.2E-47 348.2 23.9 197 98-334 1-212 (220)
92 PRK10851 sulfate/thiosulfate t 100.0 2E-42 4.3E-47 369.3 26.3 212 97-345 2-225 (353)
93 cd03296 ABC_CysA_sulfate_impor 100.0 1.7E-42 3.7E-47 352.2 24.5 210 97-343 2-223 (239)
94 cd03269 ABC_putative_ATPase Th 100.0 2.5E-42 5.3E-47 344.1 24.3 198 98-335 1-207 (210)
95 PRK11831 putative ABC transpor 100.0 2.5E-42 5.3E-47 357.0 25.1 210 95-344 5-231 (269)
96 cd03266 ABC_NatA_sodium_export 100.0 1.9E-42 4E-47 346.9 22.8 199 97-335 1-215 (218)
97 PRK11153 metN DL-methionine tr 100.0 3E-42 6.6E-47 367.5 25.6 206 97-343 1-227 (343)
98 TIGR03522 GldA_ABC_ATP gliding 100.0 4.1E-42 8.8E-47 360.8 26.1 205 98-343 3-218 (301)
99 cd03219 ABC_Mj1267_LivG_branch 100.0 2.7E-42 6E-47 349.9 23.9 214 98-342 1-228 (236)
100 PRK10908 cell division protein 100.0 3.5E-42 7.6E-47 346.0 24.2 200 97-336 1-217 (222)
101 COG1137 YhbG ABC-type (unclass 100.0 1.2E-43 2.6E-48 334.3 12.6 209 97-346 4-228 (243)
102 cd03226 ABC_cobalt_CbiO_domain 100.0 1.7E-42 3.6E-47 344.0 20.7 192 99-334 1-204 (205)
103 cd03264 ABC_drug_resistance_li 100.0 3.8E-42 8.2E-47 343.0 23.3 197 98-335 1-208 (211)
104 PRK10619 histidine/lysine/argi 100.0 8.7E-42 1.9E-46 350.7 26.5 210 96-344 4-239 (257)
105 cd03218 ABC_YhbG The ABC trans 100.0 4.9E-42 1.1E-46 347.2 24.2 205 98-343 1-219 (232)
106 cd03292 ABC_FtsE_transporter F 100.0 3.8E-42 8.2E-47 343.6 23.1 196 98-333 1-213 (214)
107 PRK11248 tauB taurine transpor 100.0 4.9E-42 1.1E-46 351.9 24.3 199 97-335 1-210 (255)
108 cd03263 ABC_subfamily_A The AB 100.0 4.9E-42 1.1E-46 344.3 23.7 202 98-340 1-215 (220)
109 PRK11247 ssuB aliphatic sulfon 100.0 3.6E-42 7.9E-47 352.7 23.1 194 96-335 11-213 (257)
110 PRK11264 putative amino-acid A 100.0 8.2E-42 1.8E-46 349.4 25.7 208 97-344 3-231 (250)
111 COG2884 FtsE Predicted ATPase 100.0 1.5E-42 3.2E-47 324.7 18.3 196 424-622 1-219 (223)
112 PRK09493 glnQ glutamine ABC tr 100.0 8E-42 1.7E-46 347.4 25.3 208 97-344 1-223 (240)
113 PRK13634 cbiO cobalt transport 100.0 5.2E-42 1.1E-46 358.2 24.4 207 98-344 3-233 (290)
114 cd03261 ABC_Org_Solvent_Resist 100.0 6.6E-42 1.4E-46 346.9 24.4 201 425-629 1-225 (235)
115 PRK13651 cobalt transporter AT 100.0 7.3E-42 1.6E-46 358.7 25.4 208 97-344 2-252 (305)
116 cd03268 ABC_BcrA_bacitracin_re 100.0 5E-42 1.1E-46 341.3 23.0 194 98-335 1-205 (208)
117 cd03262 ABC_HisP_GlnQ_permease 100.0 4.9E-42 1.1E-46 342.5 22.9 197 98-333 1-212 (213)
118 TIGR00960 3a0501s02 Type II (G 100.0 3.9E-42 8.5E-47 344.1 22.2 192 424-618 1-216 (216)
119 cd03258 ABC_MetN_methionine_tr 100.0 5.4E-42 1.2E-46 347.1 23.5 205 97-342 1-226 (233)
120 cd03225 ABC_cobalt_CbiO_domain 100.0 3.7E-42 8.1E-47 343.0 21.7 195 99-333 1-211 (211)
121 COG1117 PstB ABC-type phosphat 100.0 9.1E-43 2E-47 331.8 16.4 205 422-630 5-237 (253)
122 PRK13643 cbiO cobalt transport 100.0 9.3E-42 2E-46 355.9 25.6 209 97-345 1-232 (288)
123 PRK13637 cbiO cobalt transport 100.0 1.2E-41 2.5E-46 355.0 25.8 208 97-344 2-232 (287)
124 TIGR02314 ABC_MetN D-methionin 100.0 7.3E-42 1.6E-46 362.7 24.6 202 424-629 1-229 (343)
125 cd03259 ABC_Carb_Solutes_like 100.0 6.2E-42 1.3E-46 342.0 22.7 193 425-620 1-211 (213)
126 cd03295 ABC_OpuCA_Osmoprotecti 100.0 9.3E-42 2E-46 347.4 24.1 205 98-342 1-221 (242)
127 TIGR02211 LolD_lipo_ex lipopro 100.0 1E-41 2.3E-46 342.2 24.1 196 98-334 2-219 (221)
128 PRK09536 btuD corrinoid ABC tr 100.0 9.8E-42 2.1E-46 368.0 25.4 211 97-344 3-226 (402)
129 COG1117 PstB ABC-type phosphat 100.0 2.4E-42 5.3E-47 328.9 18.2 204 95-338 5-230 (253)
130 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.4E-41 3E-46 344.8 25.0 205 97-343 1-218 (236)
131 PRK13537 nodulation ABC transp 100.0 1.5E-41 3.2E-46 356.9 25.9 206 422-631 5-228 (306)
132 cd03256 ABC_PhnC_transporter A 100.0 9.6E-42 2.1E-46 346.9 23.7 213 98-343 1-231 (241)
133 TIGR02315 ABC_phnC phosphonate 100.0 8.6E-42 1.9E-46 347.8 23.2 214 97-343 1-232 (243)
134 PRK11124 artP arginine transpo 100.0 1.6E-41 3.5E-46 345.6 25.2 207 97-343 2-227 (242)
135 PRK13641 cbiO cobalt transport 100.0 1.6E-41 3.4E-46 354.1 25.4 208 97-344 2-232 (287)
136 PRK11629 lolD lipoprotein tran 100.0 1.5E-41 3.2E-46 343.9 24.5 199 96-335 4-224 (233)
137 TIGR01188 drrA daunorubicin re 100.0 9.4E-42 2E-46 358.3 23.6 198 105-343 1-210 (302)
138 PRK13647 cbiO cobalt transport 100.0 1.4E-41 2.9E-46 352.3 24.4 205 97-342 4-223 (274)
139 PRK10584 putative ABC transpor 100.0 1.8E-41 3.8E-46 342.2 24.6 199 96-335 5-225 (228)
140 cd03235 ABC_Metallic_Cations A 100.0 5.9E-42 1.3E-46 342.1 20.3 200 99-334 1-210 (213)
141 PRK11650 ugpC glycerol-3-phosp 100.0 1.7E-41 3.7E-46 362.6 25.2 202 424-629 3-223 (356)
142 PRK15079 oligopeptide ABC tran 100.0 2.5E-41 5.5E-46 358.1 26.3 212 95-344 6-249 (331)
143 PRK10895 lipopolysaccharide AB 100.0 1.5E-41 3.3E-46 345.6 23.6 208 97-344 3-224 (241)
144 PRK10070 glycine betaine trans 100.0 2.1E-41 4.5E-46 365.3 26.0 193 111-344 42-252 (400)
145 cd03226 ABC_cobalt_CbiO_domain 100.0 7.9E-42 1.7E-46 339.2 20.9 192 426-619 1-205 (205)
146 PRK13631 cbiO cobalt transport 100.0 2.8E-41 6.1E-46 356.4 26.2 210 95-344 19-263 (320)
147 TIGR01186 proV glycine betaine 100.0 1.3E-41 2.8E-46 362.9 23.6 200 105-345 1-218 (363)
148 PRK11432 fbpC ferric transport 100.0 2.1E-41 4.5E-46 360.9 25.2 204 422-629 4-225 (351)
149 PRK13646 cbiO cobalt transport 100.0 2.1E-41 4.6E-46 353.0 24.6 207 98-344 3-233 (286)
150 cd03257 ABC_NikE_OppD_transpor 100.0 1.2E-41 2.7E-46 343.2 22.1 202 97-335 1-225 (228)
151 PRK11247 ssuB aliphatic sulfon 100.0 2.3E-41 4.9E-46 346.9 24.4 197 421-620 9-214 (257)
152 TIGR03265 PhnT2 putative 2-ami 100.0 2.5E-41 5.5E-46 360.9 25.4 204 423-630 3-224 (353)
153 cd03224 ABC_TM1139_LivF_branch 100.0 1.9E-41 4.2E-46 340.4 23.1 201 98-341 1-216 (222)
154 TIGR00972 3a0107s01c2 phosphat 100.0 3.4E-41 7.3E-46 344.3 25.2 208 97-344 1-230 (247)
155 COG3840 ThiQ ABC-type thiamine 100.0 3.8E-42 8.2E-47 319.4 16.3 207 98-347 2-220 (231)
156 COG0411 LivG ABC-type branched 100.0 5.3E-42 1.2E-46 334.9 18.2 221 96-345 3-238 (250)
157 cd03265 ABC_DrrA DrrA is the A 100.0 3E-41 6.6E-46 338.7 24.2 198 425-626 1-217 (220)
158 cd03260 ABC_PstB_phosphate_tra 100.0 2.1E-41 4.6E-46 341.4 23.1 198 98-335 1-219 (227)
159 PRK14250 phosphate ABC transpo 100.0 3.2E-41 6.8E-46 343.3 24.3 202 97-343 3-218 (241)
160 TIGR03411 urea_trans_UrtD urea 100.0 4.3E-41 9.3E-46 342.5 25.3 215 97-344 2-229 (242)
161 PRK13548 hmuV hemin importer A 100.0 4.1E-41 8.9E-46 345.8 24.8 206 97-343 2-227 (258)
162 TIGR01288 nodI ATP-binding ABC 100.0 5E-41 1.1E-45 353.0 25.7 205 422-630 2-224 (303)
163 TIGR03005 ectoine_ehuA ectoine 100.0 4.3E-41 9.3E-46 344.6 24.3 207 98-344 1-234 (252)
164 PRK13536 nodulation factor exp 100.0 4.9E-41 1.1E-45 356.9 25.6 207 421-631 38-262 (340)
165 TIGR01978 sufC FeS assembly AT 100.0 4.8E-41 1E-45 342.2 24.5 212 98-342 1-230 (243)
166 COG1131 CcmA ABC-type multidru 100.0 3.8E-41 8.2E-46 350.9 24.2 204 424-631 4-227 (293)
167 TIGR02769 nickel_nikE nickel i 100.0 4.8E-41 1E-45 346.7 24.6 208 97-343 2-237 (265)
168 cd03296 ABC_CysA_sulfate_impor 100.0 5.9E-41 1.3E-45 340.9 24.9 202 424-629 2-225 (239)
169 COG4555 NatA ABC-type Na+ tran 100.0 1E-41 2.2E-46 321.6 17.6 206 424-631 1-223 (245)
170 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.6E-41 1E-45 337.4 23.5 193 425-620 1-214 (220)
171 PRK13638 cbiO cobalt transport 100.0 4.3E-41 9.4E-46 348.2 23.9 207 97-344 1-223 (271)
172 PRK11831 putative ABC transpor 100.0 7.1E-41 1.5E-45 346.1 25.4 205 422-630 5-233 (269)
173 PRK13636 cbiO cobalt transport 100.0 6.3E-41 1.4E-45 348.9 24.9 209 96-345 4-230 (283)
174 COG0411 LivG ABC-type branched 100.0 7.8E-42 1.7E-46 333.8 16.9 209 422-632 2-241 (250)
175 PRK14247 phosphate ABC transpo 100.0 7.5E-41 1.6E-45 342.4 25.1 210 97-344 3-232 (250)
176 PRK09452 potA putrescine/sperm 100.0 7.2E-41 1.6E-45 359.3 26.0 205 421-629 11-233 (375)
177 PRK15112 antimicrobial peptide 100.0 5.7E-41 1.2E-45 346.4 24.3 210 96-344 3-237 (267)
178 cd03268 ABC_BcrA_bacitracin_re 100.0 4.9E-41 1.1E-45 334.2 22.8 193 425-620 1-206 (208)
179 PRK11701 phnK phosphonate C-P 100.0 1.1E-40 2.4E-45 342.7 26.1 209 96-343 5-238 (258)
180 cd03256 ABC_PhnC_transporter A 100.0 6.6E-41 1.4E-45 340.8 24.2 201 425-629 1-233 (241)
181 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.7E-41 5.8E-46 349.2 21.5 205 99-344 26-248 (269)
182 cd03266 ABC_NatA_sodium_export 100.0 5.6E-41 1.2E-45 336.2 23.2 194 424-620 1-216 (218)
183 cd03301 ABC_MalK_N The N-termi 100.0 6E-41 1.3E-45 334.8 23.2 194 425-621 1-212 (213)
184 PRK14242 phosphate transporter 100.0 1.1E-40 2.3E-45 341.9 25.6 209 95-343 4-234 (253)
185 PRK13650 cbiO cobalt transport 100.0 7.6E-41 1.7E-45 347.5 24.8 206 97-344 4-227 (279)
186 PRK11308 dppF dipeptide transp 100.0 1E-40 2.2E-45 353.1 26.2 209 96-343 4-241 (327)
187 TIGR02315 ABC_phnC phosphonate 100.0 5.1E-41 1.1E-45 342.1 22.9 201 424-628 1-233 (243)
188 cd03219 ABC_Mj1267_LivG_branch 100.0 5.8E-41 1.2E-45 340.2 23.2 201 425-629 1-231 (236)
189 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.8E-41 8.3E-46 335.7 21.5 196 98-335 1-208 (211)
190 PRK13649 cbiO cobalt transport 100.0 7.5E-41 1.6E-45 348.1 24.5 207 97-343 2-231 (280)
191 PRK14268 phosphate ABC transpo 100.0 1.2E-40 2.5E-45 342.5 25.5 207 96-343 11-239 (258)
192 PRK11300 livG leucine/isoleuci 100.0 7.7E-41 1.7E-45 343.3 24.1 221 97-343 5-240 (255)
193 PRK11231 fecE iron-dicitrate t 100.0 9E-41 1.9E-45 342.8 24.4 210 97-343 2-224 (255)
194 PRK14267 phosphate ABC transpo 100.0 1.2E-40 2.7E-45 341.4 25.3 210 96-343 3-234 (253)
195 PRK09536 btuD corrinoid ABC tr 100.0 7.5E-41 1.6E-45 361.2 24.9 203 423-629 2-227 (402)
196 PRK09493 glnQ glutamine ABC tr 100.0 9.9E-41 2.2E-45 339.4 24.4 203 424-630 1-225 (240)
197 PRK10851 sulfate/thiosulfate t 100.0 9.1E-41 2E-45 356.6 25.2 202 424-629 2-225 (353)
198 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 5E-41 1.1E-45 336.6 21.5 190 425-618 1-218 (218)
199 PRK11000 maltose/maltodextrin 100.0 1E-40 2.2E-45 358.8 25.3 202 424-629 3-222 (369)
200 PRK13643 cbiO cobalt transport 100.0 9.6E-41 2.1E-45 348.3 24.2 205 424-630 1-233 (288)
201 PRK11248 tauB taurine transpor 100.0 1.1E-40 2.4E-45 341.8 24.3 195 424-621 1-212 (255)
202 PRK11614 livF leucine/isoleuci 100.0 9.7E-41 2.1E-45 338.8 23.6 205 96-343 4-223 (237)
203 cd03235 ABC_Metallic_Cations A 100.0 3.6E-41 7.8E-46 336.4 20.1 192 426-618 1-210 (213)
204 TIGR03873 F420-0_ABC_ATP propo 100.0 1.1E-40 2.3E-45 342.5 24.0 209 98-343 2-223 (256)
205 PRK10575 iron-hydroxamate tran 100.0 7.5E-41 1.6E-45 345.3 23.0 210 96-342 10-233 (265)
206 COG0488 Uup ATPase components 100.0 3.6E-41 7.8E-46 372.7 22.0 206 423-633 2-243 (530)
207 TIGR03258 PhnT 2-aminoethylpho 100.0 1.2E-40 2.6E-45 356.2 25.3 203 424-630 5-228 (362)
208 cd03269 ABC_putative_ATPase Th 100.0 1E-40 2.2E-45 332.4 23.1 193 425-620 1-208 (210)
209 PRK13634 cbiO cobalt transport 100.0 1.2E-40 2.7E-45 347.8 24.7 203 425-629 3-234 (290)
210 PRK13645 cbiO cobalt transport 100.0 1.1E-40 2.4E-45 348.3 24.3 207 97-343 6-237 (289)
211 TIGR03410 urea_trans_UrtE urea 100.0 7.6E-41 1.7E-45 338.0 22.4 202 98-342 1-217 (230)
212 PRK13652 cbiO cobalt transport 100.0 1.4E-40 3E-45 345.3 24.9 208 97-345 3-226 (277)
213 PRK11153 metN DL-methionine tr 100.0 1.3E-40 2.8E-45 355.0 25.3 202 424-629 1-229 (343)
214 PRK13637 cbiO cobalt transport 100.0 1.6E-40 3.5E-45 346.4 25.4 205 424-630 2-234 (287)
215 TIGR02673 FtsE cell division A 100.0 6.8E-41 1.5E-45 334.6 21.7 191 424-617 1-214 (214)
216 PRK15079 oligopeptide ABC tran 100.0 2E-40 4.4E-45 351.2 26.2 208 421-629 5-250 (331)
217 PRK14273 phosphate ABC transpo 100.0 1.8E-40 3.9E-45 340.4 25.0 208 96-343 6-235 (254)
218 PRK13644 cbiO cobalt transport 100.0 1.5E-40 3.2E-45 344.5 24.6 206 97-344 1-222 (274)
219 PRK09984 phosphonate/organopho 100.0 1.1E-40 2.5E-45 343.4 23.7 216 96-344 3-240 (262)
220 PRK00635 excinuclease ABC subu 100.0 3.7E-39 8E-44 390.3 40.4 315 97-470 600-981 (1809)
221 cd03257 ABC_NikE_OppD_transpor 100.0 1.3E-40 2.9E-45 335.6 23.5 197 424-620 1-226 (228)
222 TIGR03522 GldA_ABC_ATP gliding 100.0 2.1E-40 4.6E-45 347.8 25.9 204 424-631 2-222 (301)
223 PRK10253 iron-enterobactin tra 100.0 1.4E-40 3E-45 343.3 24.1 211 96-343 6-230 (265)
224 PRK13631 cbiO cobalt transport 100.0 2.1E-40 4.7E-45 349.6 25.9 208 420-629 17-264 (320)
225 PRK10619 histidine/lysine/argi 100.0 2E-40 4.3E-45 340.6 25.0 206 422-630 3-241 (257)
226 cd03258 ABC_MetN_methionine_tr 100.0 1.5E-40 3.2E-45 336.6 23.6 201 424-628 1-228 (233)
227 PRK14235 phosphate transporter 100.0 3.1E-40 6.7E-45 341.0 26.3 211 94-343 16-248 (267)
228 TIGR02323 CP_lyasePhnK phospho 100.0 2.8E-40 6.1E-45 338.7 25.7 209 97-344 3-236 (253)
229 PRK11147 ABC transporter ATPas 100.0 1.4E-40 3E-45 382.4 26.1 211 94-346 316-528 (635)
230 PRK14241 phosphate transporter 100.0 3E-40 6.5E-45 339.5 25.9 209 97-344 4-240 (258)
231 PRK10744 pstB phosphate transp 100.0 2.5E-40 5.3E-45 340.5 25.2 209 96-344 12-242 (260)
232 PRK13651 cobalt transporter AT 100.0 1.9E-40 4.1E-45 348.0 24.6 204 424-629 2-253 (305)
233 PRK13635 cbiO cobalt transport 100.0 2.2E-40 4.7E-45 344.0 24.9 207 96-344 4-227 (279)
234 PRK14256 phosphate ABC transpo 100.0 2.9E-40 6.4E-45 338.4 25.5 208 97-343 4-233 (252)
235 PRK11022 dppD dipeptide transp 100.0 2.8E-40 6.1E-45 349.8 25.9 208 97-343 3-240 (326)
236 PRK13639 cbiO cobalt transport 100.0 2.9E-40 6.4E-45 342.5 25.5 207 97-344 1-224 (275)
237 TIGR03411 urea_trans_UrtD urea 100.0 2.5E-40 5.4E-45 336.9 24.5 202 424-629 2-230 (242)
238 PRK11308 dppF dipeptide transp 100.0 3.5E-40 7.7E-45 349.0 26.5 207 422-629 3-243 (327)
239 PRK13641 cbiO cobalt transport 100.0 2.6E-40 5.6E-45 345.0 25.1 204 424-629 2-233 (287)
240 COG4152 ABC-type uncharacteriz 100.0 4.3E-41 9.4E-46 325.8 17.8 205 97-342 2-215 (300)
241 PRK11607 potG putrescine trans 100.0 2.9E-40 6.3E-45 355.1 26.1 205 421-629 16-238 (377)
242 PRK10908 cell division protein 100.0 2E-40 4.4E-45 333.2 23.3 195 424-621 1-218 (222)
243 PRK10771 thiQ thiamine transpo 100.0 1.9E-40 4.2E-45 335.6 23.2 206 97-345 1-218 (232)
244 cd03218 ABC_YhbG The ABC trans 100.0 2.1E-40 4.5E-45 335.2 23.5 201 425-629 1-221 (232)
245 COG3840 ThiQ ABC-type thiamine 100.0 8.3E-41 1.8E-45 310.5 18.6 201 424-630 1-219 (231)
246 PRK13646 cbiO cobalt transport 100.0 2.3E-40 4.9E-45 345.2 24.2 205 424-630 2-235 (286)
247 PRK10575 iron-hydroxamate tran 100.0 2.8E-40 6.2E-45 340.9 24.6 205 421-629 8-236 (265)
248 cd03263 ABC_subfamily_A The AB 100.0 2.1E-40 4.5E-45 332.5 22.9 198 425-626 1-217 (220)
249 PRK10247 putative ABC transpor 100.0 1.5E-40 3.3E-45 334.8 21.9 192 96-330 6-211 (225)
250 PRK11300 livG leucine/isoleuci 100.0 3.5E-40 7.6E-45 338.4 24.9 204 422-629 3-242 (255)
251 KOG0058 Peptide exporter, ABC 100.0 5.8E-41 1.3E-45 369.0 20.4 210 421-632 462-693 (716)
252 cd03300 ABC_PotA_N PotA is an 100.0 3.5E-40 7.5E-45 333.7 24.5 205 98-343 1-217 (232)
253 PRK11701 phnK phosphonate C-P 100.0 3.4E-40 7.4E-45 339.1 24.8 206 423-629 5-240 (258)
254 TIGR03740 galliderm_ABC gallid 100.0 3.3E-40 7.2E-45 331.8 24.2 198 98-340 1-207 (223)
255 PRK14248 phosphate ABC transpo 100.0 4.1E-40 8.9E-45 340.4 25.5 209 95-343 19-249 (268)
256 PRK13647 cbiO cobalt transport 100.0 3.9E-40 8.6E-45 341.3 25.4 202 424-628 4-225 (274)
257 PRK13543 cytochrome c biogenes 100.0 1.8E-40 4E-45 331.6 22.1 193 96-331 10-212 (214)
258 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4.2E-40 9.1E-45 334.0 24.9 203 424-631 1-222 (236)
259 PRK14245 phosphate ABC transpo 100.0 5E-40 1.1E-44 336.3 25.6 209 96-344 2-232 (250)
260 TIGR03608 L_ocin_972_ABC putat 100.0 1.5E-40 3.4E-45 330.0 21.0 189 100-329 1-206 (206)
261 KOG0058 Peptide exporter, ABC 100.0 1.3E-40 2.8E-45 366.3 22.4 248 57-346 429-691 (716)
262 PRK09473 oppD oligopeptide tra 100.0 5.3E-40 1.2E-44 348.1 26.4 211 95-344 10-249 (330)
263 PRK15112 antimicrobial peptide 100.0 3.6E-40 7.7E-45 340.5 24.4 208 422-630 2-239 (267)
264 PRK11264 putative amino-acid A 100.0 3.3E-40 7.1E-45 337.6 23.7 202 424-629 3-232 (250)
265 cd03224 ABC_TM1139_LivF_branch 100.0 3E-40 6.4E-45 331.8 22.7 200 425-628 1-219 (222)
266 cd03225 ABC_cobalt_CbiO_domain 100.0 2.6E-40 5.6E-45 329.7 22.1 190 426-617 1-211 (211)
267 cd03262 ABC_HisP_GlnQ_permease 100.0 2.4E-40 5.2E-45 330.4 21.8 191 425-618 1-213 (213)
268 cd03260 ABC_PstB_phosphate_tra 100.0 3.6E-40 7.8E-45 332.4 23.0 193 425-621 1-221 (227)
269 TIGR02769 nickel_nikE nickel i 100.0 4.5E-40 9.7E-45 339.5 24.1 205 424-629 2-239 (265)
270 PRK11144 modC molybdate transp 100.0 4.8E-40 1.1E-44 351.8 25.2 198 97-344 1-216 (352)
271 PRK14251 phosphate ABC transpo 100.0 5.7E-40 1.2E-44 336.1 24.7 207 97-343 4-232 (251)
272 cd03264 ABC_drug_resistance_li 100.0 3.6E-40 7.9E-45 328.7 22.5 192 425-620 1-209 (211)
273 cd03292 ABC_FtsE_transporter F 100.0 3.3E-40 7.1E-45 329.6 22.2 191 425-618 1-214 (214)
274 PRK15093 antimicrobial peptide 100.0 6.8E-40 1.5E-44 347.9 25.9 214 97-344 3-246 (330)
275 PRK14239 phosphate transporter 100.0 7.6E-40 1.7E-44 335.3 25.4 208 97-344 5-234 (252)
276 PRK14274 phosphate ABC transpo 100.0 7.3E-40 1.6E-44 336.8 25.2 210 95-344 10-241 (259)
277 PRK09984 phosphonate/organopho 100.0 7.8E-40 1.7E-44 337.2 25.4 202 423-628 3-240 (262)
278 PRK11124 artP arginine transpo 100.0 6E-40 1.3E-44 334.1 24.3 202 424-629 2-229 (242)
279 PRK14269 phosphate ABC transpo 100.0 7.7E-40 1.7E-44 334.1 25.1 208 97-343 2-227 (246)
280 TIGR01277 thiQ thiamine ABC tr 100.0 3.9E-40 8.5E-45 329.0 22.5 196 98-335 1-208 (213)
281 cd03299 ABC_ModC_like Archeal 100.0 5.5E-40 1.2E-44 332.9 23.7 205 98-344 1-217 (235)
282 PRK10584 putative ABC transpor 100.0 6.9E-40 1.5E-44 330.6 24.3 194 423-620 5-226 (228)
283 PRK14240 phosphate transporter 100.0 8.2E-40 1.8E-44 334.7 25.1 207 97-343 3-231 (250)
284 cd03297 ABC_ModC_molybdenum_tr 100.0 4.1E-40 8.8E-45 329.1 22.3 192 98-335 2-211 (214)
285 PRK13638 cbiO cobalt transport 100.0 4.6E-40 1E-44 340.5 23.4 203 424-629 1-224 (271)
286 PRK14271 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 338.2 26.3 210 95-344 19-249 (276)
287 TIGR02324 CP_lyasePhnL phospho 100.0 5.7E-40 1.2E-44 330.3 23.5 195 97-330 1-223 (224)
288 PRK13632 cbiO cobalt transport 100.0 4.5E-40 9.8E-45 340.5 23.3 206 96-343 6-228 (271)
289 PRK14250 phosphate ABC transpo 100.0 6.6E-40 1.4E-44 333.6 24.1 201 424-628 3-219 (241)
290 PRK13636 cbiO cobalt transport 100.0 7.6E-40 1.6E-44 340.8 25.1 205 423-630 4-231 (283)
291 PRK13548 hmuV hemin importer A 100.0 7.2E-40 1.6E-44 336.6 24.5 203 424-630 2-230 (258)
292 PRK14237 phosphate transporter 100.0 1.1E-39 2.4E-44 336.9 25.9 210 95-344 18-249 (267)
293 PRK14270 phosphate ABC transpo 100.0 1.1E-39 2.3E-44 334.0 25.6 209 95-343 2-232 (251)
294 cd03295 ABC_OpuCA_Osmoprotecti 100.0 7.7E-40 1.7E-44 333.3 24.3 202 425-629 1-224 (242)
295 PRK15093 antimicrobial peptide 100.0 8.5E-40 1.8E-44 347.1 25.6 205 424-629 3-247 (330)
296 PRK14272 phosphate ABC transpo 100.0 1E-39 2.2E-44 334.4 25.2 209 97-344 4-234 (252)
297 TIGR01188 drrA daunorubicin re 100.0 5.4E-40 1.2E-44 345.0 23.7 195 432-630 1-213 (302)
298 TIGR00972 3a0107s01c2 phosphat 100.0 1E-39 2.2E-44 333.4 25.0 203 424-630 1-232 (247)
299 PRK10636 putative ABC transpor 100.0 6.1E-40 1.3E-44 376.4 26.0 206 94-345 309-516 (638)
300 COG2274 SunT ABC-type bacterio 100.0 1.2E-39 2.7E-44 371.5 28.3 207 420-631 467-697 (709)
301 TIGR02323 CP_lyasePhnK phospho 100.0 8.5E-40 1.8E-44 335.2 24.3 206 423-629 2-237 (253)
302 PRK11231 fecE iron-dicitrate t 100.0 8.4E-40 1.8E-44 335.6 24.2 202 424-629 2-226 (255)
303 PRK14254 phosphate ABC transpo 100.0 1.8E-39 3.9E-44 338.0 27.0 208 94-343 36-266 (285)
304 PRK11629 lolD lipoprotein tran 100.0 9.9E-40 2.2E-44 330.6 24.4 194 423-620 4-225 (233)
305 PRK13633 cobalt transporter AT 100.0 6.8E-40 1.5E-44 340.7 23.7 207 96-344 3-231 (280)
306 PRK13538 cytochrome c biogenes 100.0 5E-40 1.1E-44 326.1 21.7 190 97-329 1-202 (204)
307 PRK09544 znuC high-affinity zi 100.0 7.4E-40 1.6E-44 334.8 23.6 198 96-343 3-206 (251)
308 TIGR00968 3a0106s01 sulfate AB 100.0 9.3E-40 2E-44 331.7 24.1 205 98-343 1-217 (237)
309 TIGR02211 LolD_lipo_ex lipopro 100.0 5.9E-40 1.3E-44 329.5 22.4 192 424-619 1-220 (221)
310 TIGR03415 ABC_choXWV_ATP choli 100.0 4.2E-40 9.1E-45 352.7 22.5 203 101-344 28-252 (382)
311 PRK14249 phosphate ABC transpo 100.0 1.4E-39 3E-44 333.2 25.3 207 96-342 3-231 (251)
312 PRK11819 putative ABC transpor 100.0 1.2E-39 2.7E-44 369.5 27.4 212 95-348 322-535 (556)
313 PRK10895 lipopolysaccharide AB 100.0 1E-39 2.2E-44 332.2 24.0 203 424-630 3-226 (241)
314 PRK10253 iron-enterobactin tra 100.0 1.2E-39 2.5E-44 336.4 24.7 205 421-629 4-232 (265)
315 cd03298 ABC_ThiQ_thiamine_tran 100.0 8.3E-40 1.8E-44 326.1 22.9 191 425-620 1-209 (211)
316 PRK13648 cbiO cobalt transport 100.0 9.1E-40 2E-44 337.9 23.9 207 96-344 6-229 (269)
317 PRK13640 cbiO cobalt transport 100.0 7.8E-40 1.7E-44 340.5 23.5 207 96-344 4-230 (282)
318 PRK10419 nikE nickel transport 100.0 1.2E-39 2.7E-44 336.6 24.8 205 97-340 3-235 (268)
319 PRK14262 phosphate ABC transpo 100.0 1.5E-39 3.2E-44 332.9 25.1 207 97-343 3-231 (250)
320 TIGR03005 ectoine_ehuA ectoine 100.0 1E-39 2.2E-44 334.5 23.8 201 425-629 1-235 (252)
321 PRK14253 phosphate ABC transpo 100.0 1.4E-39 3E-44 332.8 24.6 207 97-343 3-230 (249)
322 PRK11022 dppD dipeptide transp 100.0 1.3E-39 2.8E-44 344.8 25.2 205 424-629 3-242 (326)
323 TIGR02142 modC_ABC molybdenum 100.0 1.3E-39 2.8E-44 349.0 25.4 196 102-342 4-217 (354)
324 COG4525 TauB ABC-type taurine 100.0 2.3E-40 5E-45 310.6 17.0 207 96-342 2-222 (259)
325 TIGR03740 galliderm_ABC gallid 100.0 1.4E-39 3E-44 327.3 23.9 198 425-626 1-209 (223)
326 PRK13649 cbiO cobalt transport 100.0 1.3E-39 2.9E-44 338.7 24.5 203 425-629 3-233 (280)
327 PRK14259 phosphate ABC transpo 100.0 1.6E-39 3.6E-44 335.9 24.9 195 96-331 12-228 (269)
328 PRK09473 oppD oligopeptide tra 100.0 2.4E-39 5.1E-44 343.1 26.7 209 420-629 8-250 (330)
329 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.6E-39 3.5E-44 368.4 26.9 211 95-347 320-532 (552)
330 COG0410 LivF ABC-type branched 100.0 1.2E-39 2.5E-44 316.2 21.9 207 96-343 2-223 (237)
331 TIGR02982 heterocyst_DevA ABC 100.0 1.3E-39 2.8E-44 326.9 23.1 197 98-334 2-219 (220)
332 TIGR01978 sufC FeS assembly AT 100.0 1.5E-39 3.2E-44 331.3 23.8 202 425-629 1-233 (243)
333 PRK14238 phosphate transporter 100.0 1.6E-39 3.4E-44 336.4 24.3 210 95-344 22-253 (271)
334 PRK13650 cbiO cobalt transport 100.0 1.6E-39 3.6E-44 337.6 24.6 203 424-630 4-229 (279)
335 cd03231 ABC_CcmA_heme_exporter 100.0 6.6E-40 1.4E-44 324.5 20.5 186 98-329 1-198 (201)
336 PRK13642 cbiO cobalt transport 100.0 1.5E-39 3.3E-44 337.5 24.1 207 97-345 4-228 (277)
337 PRK14242 phosphate transporter 100.0 2.3E-39 5E-44 332.0 25.0 204 422-629 4-236 (253)
338 PRK13652 cbiO cobalt transport 100.0 2.3E-39 5.1E-44 336.1 25.3 204 424-630 3-227 (277)
339 cd03267 ABC_NatA_like Similar 100.0 8.9E-40 1.9E-44 331.5 21.7 191 105-335 29-233 (236)
340 TIGR03410 urea_trans_UrtE urea 100.0 1.3E-39 2.7E-44 329.1 22.6 201 425-628 1-219 (230)
341 PRK10070 glycine betaine trans 100.0 1.6E-39 3.5E-44 350.6 24.7 201 425-629 29-253 (400)
342 PRK13645 cbiO cobalt transport 100.0 1.9E-39 4.1E-44 338.9 24.5 205 423-629 5-239 (289)
343 PRK13547 hmuV hemin importer A 100.0 1.2E-39 2.5E-44 336.9 22.6 208 97-341 1-239 (272)
344 PRK14275 phosphate ABC transpo 100.0 2.7E-39 5.7E-44 337.1 25.3 210 94-343 36-267 (286)
345 KOG0057 Mitochondrial Fe/S clu 100.0 8.1E-40 1.8E-44 348.6 21.6 201 423-630 350-574 (591)
346 PRK09580 sufC cysteine desulfu 100.0 2.2E-39 4.8E-44 331.0 24.0 213 97-342 1-231 (248)
347 TIGR03873 F420-0_ABC_ATP propo 100.0 2.1E-39 4.5E-44 332.9 23.8 201 425-629 2-225 (256)
348 PRK14255 phosphate ABC transpo 100.0 3.4E-39 7.4E-44 330.5 25.2 203 96-337 4-228 (252)
349 PRK13639 cbiO cobalt transport 100.0 2.3E-39 4.9E-44 335.9 24.1 203 424-629 1-225 (275)
350 PRK14273 phosphate ABC transpo 100.0 3.9E-39 8.4E-44 330.5 25.6 204 422-629 5-237 (254)
351 PRK10418 nikD nickel transport 100.0 3.4E-39 7.5E-44 330.9 25.2 205 97-344 4-228 (254)
352 PRK14268 phosphate ABC transpo 100.0 3.7E-39 8.1E-44 331.4 25.4 205 421-629 9-241 (258)
353 PRK14246 phosphate ABC transpo 100.0 2.3E-39 5.1E-44 332.4 23.8 211 95-344 8-239 (257)
354 TIGR01186 proV glycine betaine 100.0 1.7E-39 3.8E-44 346.5 23.7 194 432-629 1-218 (363)
355 PRK14260 phosphate ABC transpo 100.0 4E-39 8.6E-44 331.3 25.2 208 97-344 7-241 (259)
356 PRK11614 livF leucine/isoleuci 100.0 2.2E-39 4.8E-44 328.9 23.0 203 423-629 4-225 (237)
357 PRK14247 phosphate ABC transpo 100.0 3.9E-39 8.5E-44 329.7 24.9 204 424-630 3-234 (250)
358 PRK14267 phosphate ABC transpo 100.0 3.8E-39 8.2E-44 330.4 24.8 204 423-629 3-236 (253)
359 PRK14236 phosphate transporter 100.0 4.6E-39 1E-43 333.1 25.7 210 95-344 23-254 (272)
360 COG4181 Predicted ABC-type tra 100.0 9.1E-40 2E-44 300.6 17.9 197 97-334 6-224 (228)
361 PRK10771 thiQ thiamine transpo 100.0 3.4E-39 7.3E-44 326.5 24.0 201 424-630 1-219 (232)
362 COG4175 ProV ABC-type proline/ 100.0 6.4E-40 1.4E-44 328.2 18.3 210 97-347 4-255 (386)
363 PRK14248 phosphate ABC transpo 100.0 4.6E-39 1E-43 332.5 25.4 207 420-630 17-252 (268)
364 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.5E-39 3.3E-44 336.1 21.8 201 426-630 26-250 (269)
365 COG1123 ATPase components of v 100.0 2E-39 4.4E-44 352.3 23.6 208 94-340 277-513 (539)
366 PRK11144 modC molybdate transp 100.0 3.3E-39 7.2E-44 345.4 24.9 200 424-630 1-218 (352)
367 PRK13543 cytochrome c biogenes 100.0 3.2E-39 7E-44 322.6 23.1 193 420-615 7-212 (214)
368 PRK14244 phosphate ABC transpo 100.0 5.2E-39 1.1E-43 329.0 24.9 207 98-343 6-234 (251)
369 cd03245 ABCC_bacteriocin_expor 100.0 1.8E-39 3.8E-44 325.8 21.0 201 98-335 3-217 (220)
370 PRK10744 pstB phosphate transp 100.0 6.6E-39 1.4E-43 329.9 25.7 205 421-629 10-243 (260)
371 PRK15064 ABC transporter ATP-b 100.0 3.4E-39 7.4E-44 364.4 25.9 207 95-346 317-525 (530)
372 CHL00131 ycf16 sulfate ABC tra 100.0 3.6E-39 7.9E-44 330.3 23.7 213 96-341 6-236 (252)
373 PRK13644 cbiO cobalt transport 100.0 4E-39 8.8E-44 333.8 24.1 202 424-629 1-223 (274)
374 COG4598 HisP ABC-type histidin 100.0 3.1E-40 6.7E-45 305.7 13.9 209 96-344 5-239 (256)
375 PRK10261 glutathione transport 100.0 4.1E-39 9E-44 369.2 26.1 211 95-344 311-551 (623)
376 PRK14243 phosphate transporter 100.0 6.4E-39 1.4E-43 330.6 24.6 208 95-344 8-246 (264)
377 PRK14261 phosphate ABC transpo 100.0 7.4E-39 1.6E-43 328.2 24.9 208 96-343 5-234 (253)
378 COG0444 DppD ABC-type dipeptid 100.0 6.6E-39 1.4E-43 326.2 24.1 207 98-343 2-240 (316)
379 PRK14258 phosphate ABC transpo 100.0 9.2E-39 2E-43 329.0 25.6 208 97-344 7-243 (261)
380 PRK10419 nikE nickel transport 100.0 5.7E-39 1.2E-43 331.7 24.0 203 424-627 3-238 (268)
381 PRK13635 cbiO cobalt transport 100.0 7.1E-39 1.5E-43 332.7 24.8 203 423-629 4-228 (279)
382 PRK14235 phosphate transporter 100.0 9.5E-39 2.1E-43 329.9 25.6 205 421-629 16-250 (267)
383 cd03300 ABC_PotA_N PotA is an 100.0 7.5E-39 1.6E-43 324.0 24.1 201 425-629 1-219 (232)
384 PRK14241 phosphate transporter 100.0 1E-38 2.3E-43 328.1 25.5 204 424-630 4-242 (258)
385 PRK15056 manganese/iron transp 100.0 4.5E-39 9.7E-44 333.2 22.8 209 97-343 6-227 (272)
386 cd03230 ABC_DR_subfamily_A Thi 100.0 4.3E-39 9.3E-44 311.1 21.2 160 98-333 1-172 (173)
387 PRK09544 znuC high-affinity zi 100.0 6.5E-39 1.4E-43 327.8 23.5 200 423-629 3-208 (251)
388 PRK14254 phosphate ABC transpo 100.0 1.5E-38 3.2E-43 331.2 26.6 206 420-629 35-268 (285)
389 cd03252 ABCC_Hemolysin The ABC 100.0 2.6E-39 5.6E-44 328.4 20.3 207 98-344 1-223 (237)
390 cd03251 ABCC_MsbA MsbA is an e 100.0 4.3E-39 9.3E-44 326.1 21.7 206 98-343 1-222 (234)
391 COG2274 SunT ABC-type bacterio 100.0 3.4E-39 7.4E-44 367.8 23.3 214 95-346 469-696 (709)
392 PRK14274 phosphate ABC transpo 100.0 1.3E-38 2.9E-43 327.4 25.5 206 421-630 9-243 (259)
393 PRK14269 phosphate ABC transpo 100.0 1E-38 2.2E-43 325.9 24.3 202 424-629 2-229 (246)
394 TIGR01277 thiQ thiamine ABC tr 100.0 9.4E-39 2E-43 319.1 23.5 192 425-621 1-210 (213)
395 PRK14265 phosphate ABC transpo 100.0 1.6E-38 3.5E-43 329.3 26.1 208 95-344 18-256 (274)
396 cd03297 ABC_ModC_molybdenum_tr 100.0 6.8E-39 1.5E-43 320.3 22.4 189 425-620 2-212 (214)
397 PRK14259 phosphate ABC transpo 100.0 1.3E-38 2.9E-43 329.1 25.4 206 421-630 10-253 (269)
398 PRK13633 cobalt transporter AT 100.0 7.3E-39 1.6E-43 333.0 23.5 204 423-630 3-233 (280)
399 PRK14256 phosphate ABC transpo 100.0 1.6E-38 3.6E-43 325.5 25.7 204 423-629 3-235 (252)
400 PRK10418 nikD nickel transport 100.0 1.1E-38 2.4E-43 327.1 24.3 204 424-629 4-229 (254)
401 PRK14239 phosphate transporter 100.0 1.5E-38 3.2E-43 325.8 25.2 203 423-629 4-235 (252)
402 PRK10247 putative ABC transpor 100.0 5.9E-39 1.3E-43 323.2 21.9 194 422-619 5-218 (225)
403 PRK14257 phosphate ABC transpo 100.0 1.2E-38 2.7E-43 337.3 25.3 210 95-344 78-311 (329)
404 PRK14245 phosphate ABC transpo 100.0 1.4E-38 3E-43 325.7 24.8 203 423-629 2-233 (250)
405 cd03254 ABCC_Glucan_exporter_l 100.0 7.1E-39 1.5E-43 323.4 22.2 207 98-344 3-224 (229)
406 PRK13547 hmuV hemin importer A 100.0 1.1E-38 2.3E-43 329.8 23.9 202 424-629 1-243 (272)
407 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 5.2E-39 1.1E-43 323.3 21.0 191 425-620 23-222 (224)
408 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 4.9E-39 1.1E-43 323.5 20.8 196 98-335 23-221 (224)
409 PRK13538 cytochrome c biogenes 100.0 6.9E-39 1.5E-43 317.9 21.5 187 424-613 1-202 (204)
410 cd03229 ABC_Class3 This class 100.0 5.8E-39 1.2E-43 311.6 20.4 162 98-333 1-178 (178)
411 cd03223 ABCD_peroxisomal_ALDP 100.0 8.1E-39 1.8E-43 307.0 21.2 162 98-332 1-163 (166)
412 PRK14252 phosphate ABC transpo 100.0 2.4E-38 5.2E-43 326.6 26.2 209 95-343 14-246 (265)
413 cd03248 ABCC_TAP TAP, the Tran 100.0 2.5E-39 5.5E-44 326.1 18.4 200 95-333 9-225 (226)
414 cd03245 ABCC_bacteriocin_expor 100.0 9.6E-39 2.1E-43 320.5 22.4 191 425-620 3-218 (220)
415 PRK14266 phosphate ABC transpo 100.0 1.8E-38 3.9E-43 324.8 24.9 208 97-344 3-232 (250)
416 PRK15439 autoinducer 2 ABC tra 100.0 1.1E-38 2.3E-43 358.4 25.4 204 422-629 9-228 (510)
417 PRK14251 phosphate ABC transpo 100.0 1.8E-38 3.9E-43 325.0 24.7 203 423-629 3-234 (251)
418 PRK14257 phosphate ABC transpo 100.0 1.9E-38 4.1E-43 335.9 25.5 209 418-630 74-313 (329)
419 TIGR01184 ntrCD nitrate transp 100.0 4.6E-39 9.9E-44 325.1 19.9 185 113-335 1-194 (230)
420 PRK13632 cbiO cobalt transport 100.0 1.5E-38 3.2E-43 329.1 23.9 204 422-629 5-230 (271)
421 PRK14270 phosphate ABC transpo 100.0 2.6E-38 5.7E-43 323.8 25.4 204 422-629 2-234 (251)
422 COG0410 LivF ABC-type branched 100.0 1.9E-38 4E-43 307.8 22.8 205 423-630 2-226 (237)
423 TIGR03269 met_CoM_red_A2 methy 100.0 1.4E-38 3.1E-43 358.7 25.7 207 95-342 277-513 (520)
424 PRK14240 phosphate transporter 100.0 2.7E-38 5.9E-43 323.5 25.4 202 424-629 3-233 (250)
425 PRK15056 manganese/iron transp 100.0 1.3E-38 2.9E-43 329.7 23.2 202 424-628 6-228 (272)
426 cd03234 ABCG_White The White s 100.0 1.1E-38 2.4E-43 321.5 21.9 202 97-335 3-223 (226)
427 PRK14275 phosphate ABC transpo 100.0 3.2E-38 7E-43 328.9 26.1 206 420-629 35-269 (286)
428 PRK13640 cbiO cobalt transport 100.0 2.7E-38 5.8E-43 329.0 25.0 205 422-630 3-232 (282)
429 cd03299 ABC_ModC_like Archeal 100.0 3.1E-38 6.7E-43 320.1 24.7 201 425-630 1-219 (235)
430 PRK14237 phosphate transporter 100.0 3.6E-38 7.7E-43 325.6 25.6 206 421-630 17-251 (267)
431 PRK14272 phosphate ABC transpo 100.0 3.4E-38 7.4E-43 323.1 25.3 203 424-629 4-235 (252)
432 PRK13539 cytochrome c biogenes 100.0 1.2E-38 2.7E-43 316.8 21.3 189 97-331 2-200 (207)
433 PRK13540 cytochrome c biogenes 100.0 1E-38 2.2E-43 315.7 20.6 185 97-327 1-197 (200)
434 TIGR00968 3a0106s01 sulfate AB 100.0 2.8E-38 6E-43 320.8 24.3 202 425-630 1-220 (237)
435 TIGR01189 ccmA heme ABC export 100.0 1E-38 2.2E-43 315.2 20.3 185 98-328 1-197 (198)
436 cd03250 ABCC_MRP_domain1 Domai 100.0 1.4E-38 3.1E-43 315.6 21.4 195 98-333 1-204 (204)
437 COG4987 CydC ABC-type transpor 100.0 5.1E-39 1.1E-43 342.3 19.1 201 424-630 336-561 (573)
438 TIGR02142 modC_ABC molybdenum 100.0 2.4E-38 5.2E-43 339.2 24.5 196 429-630 4-221 (354)
439 PRK14238 phosphate transporter 100.0 3.6E-38 7.7E-43 326.3 24.9 206 420-629 20-254 (271)
440 cd03231 ABC_CcmA_heme_exporter 100.0 1.5E-38 3.3E-43 314.7 21.2 186 425-613 1-198 (201)
441 PRK13642 cbiO cobalt transport 100.0 4.3E-38 9.4E-43 326.6 25.1 203 424-630 4-229 (277)
442 PRK14255 phosphate ABC transpo 100.0 4.8E-38 1E-42 322.0 25.1 200 422-624 3-231 (252)
443 PRK14264 phosphate ABC transpo 100.0 5.5E-38 1.2E-42 330.0 25.9 222 94-344 42-287 (305)
444 PRK09700 D-allose transporter 100.0 1.4E-38 3.1E-43 357.8 23.0 202 423-628 4-232 (510)
445 cd03214 ABC_Iron-Siderophores_ 100.0 2.1E-38 4.4E-43 308.3 20.9 174 426-620 1-178 (180)
446 PRK13648 cbiO cobalt transport 100.0 3.5E-38 7.6E-43 326.1 23.8 204 422-629 5-230 (269)
447 KOG0055 Multidrug/pheromone ex 100.0 7.2E-39 1.6E-43 370.6 20.6 206 421-631 347-577 (1228)
448 PRK14249 phosphate ABC transpo 100.0 5.8E-38 1.3E-42 321.2 24.9 203 423-629 3-234 (251)
449 COG0444 DppD ABC-type dipeptid 100.0 2.3E-38 5E-43 322.3 21.6 206 424-630 1-243 (316)
450 PRK14265 phosphate ABC transpo 100.0 7.1E-38 1.5E-42 324.5 25.7 206 420-629 16-257 (274)
451 PRK14271 phosphate ABC transpo 100.0 6.9E-38 1.5E-42 324.8 25.6 205 422-630 19-251 (276)
452 PRK14262 phosphate ABC transpo 100.0 6E-38 1.3E-42 320.9 24.8 202 424-629 3-233 (250)
453 cd03254 ABCC_Glucan_exporter_l 100.0 3.3E-38 7.2E-43 318.5 22.6 201 425-630 3-226 (229)
454 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.2E-38 2.7E-43 323.6 19.5 206 98-343 1-223 (238)
455 PRK11174 cysteine/glutathione 100.0 3.4E-38 7.3E-43 361.0 25.4 211 97-346 349-572 (588)
456 TIGR02982 heterocyst_DevA ABC 100.0 4.9E-38 1.1E-42 315.5 23.3 190 425-618 2-219 (220)
457 PRK10762 D-ribose transporter 100.0 2.2E-38 4.8E-43 355.4 23.1 196 423-621 3-222 (501)
458 cd03267 ABC_NatA_like Similar 100.0 3.3E-38 7.2E-43 320.1 22.2 187 432-620 29-234 (236)
459 CHL00131 ycf16 sulfate ABC tra 100.0 6.2E-38 1.3E-42 321.2 24.4 202 422-626 5-237 (252)
460 PRK14236 phosphate transporter 100.0 1.1E-37 2.3E-42 322.9 26.3 205 421-629 22-255 (272)
461 COG4175 ProV ABC-type proline/ 100.0 2.2E-38 4.7E-43 317.3 20.2 201 424-628 4-252 (386)
462 cd03252 ABCC_Hemolysin The ABC 100.0 4.6E-38 1E-42 319.2 23.0 200 425-630 1-225 (237)
463 PRK15134 microcin C ABC transp 100.0 2.7E-38 5.8E-43 357.0 23.5 210 95-343 273-512 (529)
464 COG1137 YhbG ABC-type (unclass 100.0 3E-39 6.6E-44 304.6 13.1 204 423-630 3-228 (243)
465 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.3E-38 7.1E-43 366.9 24.8 202 423-630 450-673 (686)
466 cd03247 ABCC_cytochrome_bd The 100.0 2.7E-38 5.9E-43 306.9 20.0 162 98-335 1-175 (178)
467 PRK14244 phosphate ABC transpo 100.0 6.1E-38 1.3E-42 321.1 23.7 202 425-630 6-237 (251)
468 COG4598 HisP ABC-type histidin 100.0 9E-39 1.9E-43 295.9 15.7 205 423-631 5-242 (256)
469 PRK13545 tagH teichoic acids e 100.0 1.2E-37 2.5E-42 339.9 27.2 207 96-346 20-232 (549)
470 PRK14243 phosphate transporter 100.0 7.3E-38 1.6E-42 322.8 24.4 204 423-630 9-248 (264)
471 PRK14263 phosphate ABC transpo 100.0 1.4E-37 3.1E-42 320.0 26.3 207 96-344 7-243 (261)
472 PRK14253 phosphate ABC transpo 100.0 9.7E-38 2.1E-42 319.2 24.9 202 424-629 3-232 (249)
473 cd03244 ABCC_MRP_domain2 Domai 100.0 3E-38 6.4E-43 317.2 20.7 200 98-335 3-216 (221)
474 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.6E-38 7.9E-43 325.6 21.8 209 98-346 3-225 (275)
475 PRK14258 phosphate ABC transpo 100.0 9.1E-38 2E-42 321.6 24.7 203 424-630 7-245 (261)
476 COG4988 CydD ABC-type transpor 100.0 3.1E-38 6.8E-43 341.6 22.2 201 423-629 319-542 (559)
477 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.1E-38 6.7E-43 368.6 23.8 212 96-345 476-699 (710)
478 cd03253 ABCC_ATM1_transporter 100.0 4.2E-38 9.1E-43 319.2 21.7 206 98-343 1-221 (236)
479 cd03246 ABCC_Protease_Secretio 100.0 3.4E-38 7.4E-43 304.8 20.0 157 98-333 1-172 (173)
480 cd03251 ABCC_MsbA MsbA is an e 100.0 6.5E-38 1.4E-42 317.4 23.0 200 425-630 1-225 (234)
481 cd03215 ABC_Carb_Monos_II This 100.0 3.2E-38 7E-43 307.5 19.9 161 97-333 4-181 (182)
482 COG4152 ABC-type uncharacteriz 100.0 1.5E-38 3.2E-43 308.3 17.2 205 424-632 2-221 (300)
483 PRK13546 teichoic acids export 100.0 2.8E-37 6.1E-42 317.7 27.8 204 98-345 5-231 (264)
484 cd03213 ABCG_EPDR ABCG transpo 100.0 6.1E-38 1.3E-42 308.6 21.9 170 97-335 3-191 (194)
485 PRK14264 phosphate ABC transpo 100.0 1.4E-37 3E-42 327.0 25.9 213 414-630 35-289 (305)
486 TIGR03608 L_ocin_972_ABC putat 100.0 3.7E-38 8E-43 312.9 20.4 183 427-613 1-206 (206)
487 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.9E-38 8.5E-43 366.3 23.8 210 97-345 451-672 (686)
488 TIGR03415 ABC_choXWV_ATP choli 100.0 4E-38 8.7E-43 337.5 21.8 197 429-629 29-253 (382)
489 cd03232 ABC_PDR_domain2 The pl 100.0 8E-38 1.7E-42 307.3 22.2 170 97-335 3-189 (192)
490 PRK14260 phosphate ABC transpo 100.0 1.4E-37 3E-42 319.9 24.9 202 424-629 7-242 (259)
491 cd03369 ABCC_NFT1 Domain 2 of 100.0 7.3E-38 1.6E-42 311.2 22.2 183 97-335 6-202 (207)
492 COG4988 CydD ABC-type transpor 100.0 6.8E-38 1.5E-42 339.0 23.6 209 98-346 321-543 (559)
493 COG4559 ABC-type hemin transpo 100.0 3.3E-38 7.2E-43 300.1 18.4 201 424-628 1-228 (259)
494 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.5E-38 9.7E-43 367.3 23.7 204 422-630 475-700 (710)
495 TIGR02770 nickel_nikD nickel i 100.0 6.9E-38 1.5E-42 316.5 21.8 193 112-344 1-213 (230)
496 cd03215 ABC_Carb_Monos_II This 100.0 5.2E-38 1.1E-42 306.0 20.2 166 422-618 2-182 (182)
497 PRK14261 phosphate ABC transpo 100.0 1.5E-37 3.3E-42 318.5 24.7 204 422-629 4-236 (253)
498 PRK13549 xylose transporter AT 100.0 7.4E-38 1.6E-42 351.6 24.2 201 423-627 4-229 (506)
499 PRK11174 cysteine/glutathione 100.0 5.5E-38 1.2E-42 359.3 23.5 202 424-631 349-573 (588)
500 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.1E-37 2.4E-42 322.0 23.4 198 425-630 3-225 (275)
No 1
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=7.4e-98 Score=823.24 Aligned_cols=522 Identities=42% Similarity=0.696 Sum_probs=455.1
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCccCCC
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMS 175 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~ 175 (645)
.+|+++|++++|+++++|+++||+|.+|+++||||+||||||||||+|+|.+.|++|+|... ...+|+|++|++.....
T Consensus 2 ~~i~~~~ls~~~g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~-~~~~v~~l~Q~~~~~~~ 80 (530)
T COG0488 2 SMITLENLSLAYGDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRP-KGLRVGYLSQEPPLDPE 80 (530)
T ss_pred ceEEEeeeEEeeCCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeec-CCceEEEeCCCCCcCCC
Confidence 36999999999999999999999999999999999999999999999999999999999987 35689999999998888
Q ss_pred CCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcccccc
Q 006442 176 RTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDR 255 (645)
Q Consensus 176 ~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~ 255 (645)
.||.+.+..++.+.......++.+...+... ....+..+......++.|.++.++..+|..+|++.. ++
T Consensus 81 ~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~--~~ 149 (530)
T COG0488 81 KTVLDYVIEGFGELRELLAELEEAYALLADP---------DDELLAELEALLEELDGWTLEARAEEALLGLGFPDE--DR 149 (530)
T ss_pred ccHHHHHHhhhHHHHHHHHHHHHHHHhcccc---------hhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc--cC
Confidence 8999999877766544444444333322111 112233344455566779999999999999999754 89
Q ss_pred cCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCceeE
Q 006442 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSR 335 (645)
Q Consensus 256 ~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~ 335 (645)
++.+||||||.||+||+||+.+||+|||||||||||.+++.||.++|+++..|||+||||++|++.+|++|+.++.|++.
T Consensus 150 ~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t~I~~ld~g~l~ 229 (530)
T COG0488 150 PVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVATHILELDRGKLT 229 (530)
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhhheEEecCCcee
Confidence 99999999999999999999999999999999999999999999999877669999999999999999999999999999
Q ss_pred EeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCch-hhHHHHHHHHHHHHHhhhhccccc-ccceEEe
Q 006442 336 TYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANS-GRASSAEKKLERLQEEEQIEKPFQ-RKQMKIR 413 (645)
Q Consensus 336 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~l~rl~~~~~~~~~~~-~~~~~~~ 413 (645)
.|.|||+.|+.++........+++.++++++++...++++....+++ .++.++.+.++++++.....++.. .+...+.
T Consensus 230 ~y~Gny~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~k~a~sr~k~l~k~~~~~~~~~~~~~~~~~~~~ 309 (530)
T COG0488 230 PYKGNYSSYLEQKAERLRQEAAAYEKQQKELAKEQEWIRRGKAAASKAKKAKSRIKRLEKLEARLAEERPVEEGKPLAFR 309 (530)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHhhhhhcccccccccceee
Confidence 99999999999999988888899999999999999999987664433 467778888888875422333332 3334456
Q ss_pred ccCCC-CCCCcEEEEEeeeeeeCC-eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecccc
Q 006442 414 FPERG-RSGRSVVTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPN 491 (645)
Q Consensus 414 ~p~~~-~~~~~~i~~~~v~~~y~~-~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~ 491 (645)
|++.. ..++.+++++|+++.|++ +.+++++||.|.+|++|||+||||+|||||||+|+|...|.+|+|.+. ..+..+
T Consensus 310 f~~~~~~~g~~vl~~~~~~~~y~~~~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g-~~v~ig 388 (530)
T COG0488 310 FPPPGKRLGKLVLEFENVSKGYDGGRLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVG-ETVKIG 388 (530)
T ss_pred ccCCcccCCCeeEEEeccccccCCCceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeC-CceEEE
Confidence 66655 478999999999999965 689999999999999999999999999999999999999999999986 447889
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCC
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt 571 (645)
||.|+..... .+.|+.+++...........++..|++|+|..+...+++..||||||.||+||+.++.+|++|||||||
T Consensus 389 yf~Q~~~~l~-~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~~~~~v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPT 467 (530)
T COG0488 389 YFDQHRDELD-PDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGEDQEKPVGVLSGGEKARLLLAKLLLQPPNLLLLDEPT 467 (530)
T ss_pred EEEehhhhcC-ccCcHHHHHHhhCccccHHHHHHHHHHcCCChHHHhCchhhcCHhHHHHHHHHHHhccCCCEEEEcCCC
Confidence 9999875433 778999999887755557789999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHHH
Q 006442 572 NHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSLW 632 (645)
Q Consensus 572 ~~LD~~s~~~l~~~l~~~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~~ 632 (645)
||||.++.+.|.++|.+|.+|||+||||.+|+.++|+++|.+++ ++..+.|+|++|.+..
T Consensus 468 NhLDi~s~~aLe~aL~~f~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~~ 527 (530)
T COG0488 468 NHLDIESLEALEEALLDFEGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQK 527 (530)
T ss_pred ccCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHhh
Confidence 99999999999999999999999999999999999999999999 8888999999998754
No 2
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-90 Score=790.71 Aligned_cols=516 Identities=31% Similarity=0.536 Sum_probs=415.7
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCccCCCC
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSR 176 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~~ 176 (645)
+|+++|++++|+++++|+||||+|++|+++||+||||||||||||+|+|+++|++|+|.+++ ...++|++|++.. ...
T Consensus 1 ~i~i~nls~~~g~~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~-~~~i~~~~q~~~~-~~~ 78 (638)
T PRK10636 1 MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPG-NWQLAWVNQETPA-LPQ 78 (638)
T ss_pred CEEEEEEEEEeCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-CCEEEEEecCCCC-CCC
Confidence 48999999999999999999999999999999999999999999999999999999999975 3579999997533 245
Q ss_pred CHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCccccccc
Q 006442 177 TVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (645)
Q Consensus 177 Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (645)
|+.+++...+.........+. ..... ... ..+..+.......+.+..+.++.+++..+|+..+..+++
T Consensus 79 ~~~~~v~~~~~~~~~l~~~~~----~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~ 146 (638)
T PRK10636 79 PALEYVIDGDREYRQLEAQLH----DANER-NDG-------HAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERP 146 (638)
T ss_pred CHHHHHHHhhHHHHHHHHHHH----HHhcc-CCH-------HHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCc
Confidence 777776532211100000000 00000 000 001111111122345566788999999999975577899
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCceeEE
Q 006442 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRT 336 (645)
Q Consensus 257 ~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~ 336 (645)
+.+|||||||||+|||||+.+|+||||||||||||+.++.||.++|++.+.|||+||||++++..+||+|+++++|++..
T Consensus 147 ~~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~~~tviivsHd~~~l~~~~d~i~~L~~G~i~~ 226 (638)
T PRK10636 147 VSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSLFE 226 (638)
T ss_pred hhhcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHhcCEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999988
Q ss_pred eccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-chhhHHHHHHHHHHHHHhhhhcccccccceEEecc
Q 006442 337 YEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGA-NSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFP 415 (645)
Q Consensus 337 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~p 415 (645)
|.|+|+.|...+......+...|.++++++++..+++.+....+ .+.++.++.+.++++... .++...+...+.+|
T Consensus 227 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~a~~~~~a~~r~~~l~~~~~~---~~~~~~~~~~~~~~ 303 (638)
T PRK10636 227 YTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELI---APAHVDNPFHFSFR 303 (638)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhcc---cccccCCceeEecC
Confidence 99999999988776677777888889998888888887643321 122334455555554421 11111234455666
Q ss_pred CCCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecccchhcc
Q 006442 416 ERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ 495 (645)
Q Consensus 416 ~~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~q 495 (645)
++...++.+|+++|+++.|+++.+|+++||+|.+|+++||+||||||||||+++|+|+++|++|+|.+++ .+..+|++|
T Consensus 304 ~~~~~~~~~l~~~~l~~~y~~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~-~~~igy~~Q 382 (638)
T PRK10636 304 APESLPNPLLKMEKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAK-GIKLGYFAQ 382 (638)
T ss_pred CCccCCCceEEEEeeEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECC-CEEEEEecC
Confidence 6555678899999999999988999999999999999999999999999999999999999999999964 245678888
Q ss_pred chhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCC
Q 006442 496 NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 575 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD 575 (645)
++...+....++.+++...........+..+|+.+++..+..++++..|||||||||+|||+|+.+|+||||||||||||
T Consensus 383 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~~p~lLlLDEPt~~LD 462 (638)
T PRK10636 383 HQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLD 462 (638)
T ss_pred cchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 64334556678888765322222345688999999996556789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 576 IPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 576 ~~s~~~l~~~l~~~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
+.++..|.++|.++++|||+||||++++..+||++++|++|++..+.|+|++|.+
T Consensus 463 ~~~~~~l~~~L~~~~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 463 LDMRQALTEALIDFEGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 9999999999999988999999999999999999999999999888999999954
No 3
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=3.9e-89 Score=783.96 Aligned_cols=521 Identities=33% Similarity=0.578 Sum_probs=412.9
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCccCCCC
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSR 176 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~~ 176 (645)
+|+++|++++|+++++|+|+||+|++|+++||+|||||||||||++|+|+++|++|+|.+++ ...++|++|.+......
T Consensus 3 ~l~i~~ls~~~~~~~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~-~~~~~~l~q~~~~~~~~ 81 (635)
T PRK11147 3 LISIHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQ-DLIVARLQQDPPRNVEG 81 (635)
T ss_pred EEEEeeEEEEeCCceeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCC-CCEEEEeccCCCCCCCC
Confidence 59999999999988899999999999999999999999999999999999999999999985 45689999976543456
Q ss_pred CHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCccccccc
Q 006442 177 TVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (645)
Q Consensus 177 Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (645)
++.+++..++............+...+.. ....+ .+..+..+.......+.+..+.++.+++..+|+. .+++
T Consensus 82 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~---~~~~ 153 (635)
T PRK11147 82 TVYDFVAEGIEEQAEYLKRYHDISHLVET-DPSEK----NLNELAKLQEQLDHHNLWQLENRINEVLAQLGLD---PDAA 153 (635)
T ss_pred CHHHHHHHhhHHHHHHHHHHHHHHHHhcc-CchHH----HHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCCC---CCCc
Confidence 88888653322111111111111111100 00000 1111111111112233455677899999999995 3788
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCceeEE
Q 006442 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRT 336 (645)
Q Consensus 257 ~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~ 336 (645)
+.+|||||||||+|||||+.+|+||||||||||||+.+++||.++|++.+.|||+||||++++..+||+|+++++|++..
T Consensus 154 ~~~LSgGekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~~L~~~~~tvlivsHd~~~l~~~~d~i~~L~~G~i~~ 233 (635)
T PRK11147 154 LSSLSGGWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEGFLKTFQGSIIFISHDRSFIRNMATRIVDLDRGKLVS 233 (635)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhcCeEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999998877899999999999999999999999999988
Q ss_pred eccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHhhhhcccccccceEEeccC
Q 006442 337 YEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFPE 416 (645)
Q Consensus 337 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~p~ 416 (645)
|.|+|+.|..++......+...+..+++++++...++++ ...+...+..+..+.+++++... ..++.......+.+|.
T Consensus 234 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 311 (635)
T PRK11147 234 YPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQ-GIKARRTRNEGRVRALKALRRER-SERREVMGTAKMQVEE 311 (635)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhhhHHHHHHHHHHhhhhh-ccccccCCceeEEeCC
Confidence 999999999888776666667777777777777666665 22111111133344444443211 1111112234555665
Q ss_pred CCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecccchhccc
Q 006442 417 RGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQN 496 (645)
Q Consensus 417 ~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~q~ 496 (645)
....++.+|+++|+++.|+++.+|+++||+|.+|+++||+|||||||||||++|+|+++|++|+|.+ |.++..+|+.|+
T Consensus 312 ~~~~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~~i~y~~q~ 390 (635)
T PRK11147 312 ASRSGKIVFEMENVNYQIDGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKLEVAYFDQH 390 (635)
T ss_pred CCCCCCceEEEeeeEEEECCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCcEEEEEeCc
Confidence 5556788999999999999888999999999999999999999999999999999999999999999 555667888876
Q ss_pred hhhcCCCCCCHHHHHHhhhccc----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCC
Q 006442 497 QAEALDLDKTVLETVAEAAEDW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTN 572 (645)
Q Consensus 497 ~~~~l~~~~tv~e~v~~~~~~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~ 572 (645)
. ..+.++.|+.+++....... ....+..+|+.+++..+..++++.+|||||||||+|||||+.+|++||||||||
T Consensus 391 ~-~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~~~p~lLlLDEPt~ 469 (635)
T PRK11147 391 R-AELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLFLKPSNLLILDEPTN 469 (635)
T ss_pred c-cccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 4 35677889999997643211 134578899999996566799999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhCCEEEEEe-CCeEEeeCCChhHHHH
Q 006442 573 HLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVK-GSNLQDYAGDYNQVQS 630 (645)
Q Consensus 573 ~LD~~s~~~l~~~l~~~~~tvi~vsHd~~~i~~~~d~v~~l~-~g~i~~~~~~~~~~~~ 630 (645)
|||+.++..|.++|+++++|||+||||++++..+||++++|+ +|++..|.|+|++|.+
T Consensus 470 ~LD~~~~~~l~~~l~~~~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 470 DLDVETLELLEELLDSYQGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred CCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 999999999999999998899999999999999999999998 8999999999999965
No 4
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.7e-87 Score=756.01 Aligned_cols=526 Identities=32% Similarity=0.518 Sum_probs=405.5
Q ss_pred ccEEEEeEEEEeC-CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCccCC
Q 006442 96 SGVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSM 174 (645)
Q Consensus 96 ~~i~i~nls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~ 174 (645)
++|+++|++++|+ ++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+++ ...||||+|++.+++
T Consensus 5 ~~l~i~~l~~~y~~~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~-~~~i~~v~Q~~~~~~ 83 (556)
T PRK11819 5 YIYTMNRVSKVVPPKKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAP-GIKVGYLPQEPQLDP 83 (556)
T ss_pred EEEEEeeEEEEeCCCCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-CCEEEEEecCCCCCC
Confidence 4799999999998 78899999999999999999999999999999999999999999999874 457999999998878
Q ss_pred CCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCccccc
Q 006442 175 SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGD 254 (645)
Q Consensus 175 ~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~ 254 (645)
..||.||+...+.................. ...+.+..+++....+.......+.++.+.++.+++..+|+. ..+
T Consensus 84 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~ 158 (556)
T PRK11819 84 EKTVRENVEEGVAEVKAALDRFNEIYAAYA---EPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCP--PWD 158 (556)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhc---cCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCC--ccc
Confidence 889999986432110000000000000000 000011112222333333344455667778899999999995 368
Q ss_pred ccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCcee
Q 006442 255 RLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVS 334 (645)
Q Consensus 255 ~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~i~~l~~G~~ 334 (645)
+++.+|||||||||+|||||+.+|++|||||||||||+.++.++.++|++.+.|||+||||++++..+||+|+++++|++
T Consensus 159 ~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~~tviiisHd~~~~~~~~d~i~~l~~g~i 238 (556)
T PRK11819 159 AKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYPGTVVAVTHDRYFLDNVAGWILELDRGRG 238 (556)
T ss_pred CchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEeCCEE
Confidence 89999999999999999999999999999999999999999999999988778999999999999999999999999998
Q ss_pred EEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHhhhhcccccccceEEec
Q 006442 335 RTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRF 414 (645)
Q Consensus 335 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~ 414 (645)
..|.|+|+.|...+........+.++++++.+.+....+++... ..........+.+++.... ..+..++...+.+
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 314 (556)
T PRK11819 239 IPWEGNYSSWLEQKAKRLAQEEKQEAARQKALKRELEWVRQSPK-ARQAKSKARLARYEELLSE---EYQKRNETNEIFI 314 (556)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHhhcc---cccccCCCceeec
Confidence 77999999998776554444445566665555544444432110 0000111111222222111 1111111122333
Q ss_pred cCCCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecccchhc
Q 006442 415 PERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFE 494 (645)
Q Consensus 415 p~~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~ 494 (645)
|......+++|+++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.+++ ++..+|++
T Consensus 315 ~~~~~~~~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~~~i~~v~ 393 (556)
T PRK11819 315 PPGPRLGDKVIEAENLSKSFGDRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-TVKLAYVD 393 (556)
T ss_pred CCCCCCCCeEEEEEeEEEEECCeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-ceEEEEEe
Confidence 33333356789999999999988899999999999999999999999999999999999999999999954 44567888
Q ss_pred cchhhcCCCCCCHHHHHHhhhcc----ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCC
Q 006442 495 QNQAEALDLDKTVLETVAEAAED----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (645)
Q Consensus 495 q~~~~~l~~~~tv~e~v~~~~~~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 570 (645)
|+. ..+.+..|+.+++...... .....++.+|+.+++.....++++.+|||||||||+|||||+.+|++||||||
T Consensus 394 q~~-~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEP 472 (556)
T PRK11819 394 QSR-DALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGGDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEP 472 (556)
T ss_pred Cch-hhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 764 2456778999999764321 12334567899999954457899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhCCEEEEEeC-CeEEeeCCChhHHHHHHh
Q 006442 571 TNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKG-SNLQDYAGDYNQVQSLWF 633 (645)
Q Consensus 571 t~~LD~~s~~~l~~~l~~~~~tvi~vsHd~~~i~~~~d~v~~l~~-g~i~~~~~~~~~~~~~~~ 633 (645)
|+|||+.++..+.+.|.++.+|||+||||++++..+||++++|++ |++..+.|+|++|++...
T Consensus 473 t~~LD~~~~~~l~~~l~~~~~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~~~ 536 (556)
T PRK11819 473 TNDLDVETLRALEEALLEFPGCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEEDKK 536 (556)
T ss_pred CCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHHHH
Confidence 999999999999999999988999999999999999999999985 888888999999976544
No 5
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-86 Score=748.98 Aligned_cols=524 Identities=33% Similarity=0.571 Sum_probs=398.0
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCccCCCC
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSR 176 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~~ 176 (645)
+|+++|++|+|+++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+++. ..|+|++|++.++...
T Consensus 1 ml~i~~ls~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-~~i~~~~q~~~~~~~~ 79 (530)
T PRK15064 1 MLSTANITMQFGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-ERLGKLRQDQFAFEEF 79 (530)
T ss_pred CEEEEEEEEEeCCcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-CEEEEEeccCCcCCCC
Confidence 389999999999888999999999999999999999999999999999999999999999753 5799999998887888
Q ss_pred CHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCccccccc
Q 006442 177 TVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (645)
Q Consensus 177 Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (645)
||.||+................+.............+ ............+..+.++.++++.+|+.....+++
T Consensus 80 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~ 152 (530)
T PRK15064 80 TVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKV-------ADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGL 152 (530)
T ss_pred cHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHH-------HHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCc
Confidence 9999986432110000000000000000000000000 111111112333445667889999999964344678
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCceeEE
Q 006442 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRT 336 (645)
Q Consensus 257 ~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~ 336 (645)
+.+|||||||||+|||||+.+|+||||||||+|||+.++.+|.++|++.+.|||+||||++++.++||+|+++++|++..
T Consensus 153 ~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tiiivsHd~~~~~~~~d~i~~l~~g~i~~ 232 (530)
T PRK15064 153 MSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADLDYGELRV 232 (530)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEeCCEEEE
Confidence 89999999999999999999999999999999999999999999998889999999999999999999999999999867
Q ss_pred eccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-hhhHHHHHHHHHHHHHhhhhcccccccceEEecc
Q 006442 337 YEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGAN-SGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFP 415 (645)
Q Consensus 337 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~p 415 (645)
+.|++++|..+.........+++..+++++++....+.+...... ...+....+.++++.... . .+.........++
T Consensus 233 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~ 310 (530)
T PRK15064 233 YPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKAKQATSRAKQIDKIKLEE-V-KPSSRQNPFIRFE 310 (530)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhhccccc-c-CCccccCceeeCC
Confidence 899999987665544444455555666666555544443211110 011111122222211000 0 0100001111223
Q ss_pred CCCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecccchhcc
Q 006442 416 ERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQ 495 (645)
Q Consensus 416 ~~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~q 495 (645)
.....++.+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.+++.. ..+|++|
T Consensus 311 ~~~~~~~~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~-~i~~~~q 389 (530)
T PRK15064 311 QDKKLHRNALEVENLTKGFDNGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSENA-NIGYYAQ 389 (530)
T ss_pred CCCCCCCceEEEEeeEEeeCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCce-EEEEEcc
Confidence 222334678999999999988889999999999999999999999999999999999999999999998743 4578877
Q ss_pred chhhcCCCCCCHHHHHHhhh-ccccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCC
Q 006442 496 NQAEALDLDKTVLETVAEAA-EDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHL 574 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~-~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~L 574 (645)
+....+....|+.+++.... .......+..+|+.+++..+..++++.+|||||||||+|||||+.+|++|||||||++|
T Consensus 390 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~L 469 (530)
T PRK15064 390 DHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDIKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHM 469 (530)
T ss_pred cccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHhcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 64333555689999986432 12234567889999999545679999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 575 DIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 575 D~~s~~~l~~~l~~~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
|+.+++.+.+.|+++++|||+||||++++..+|||+++|++|+++.+.|+++++.+.
T Consensus 470 D~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 470 DMESIESLNMALEKYEGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 999999999999999889999999999999999999999999998778998887654
No 6
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=5.2e-88 Score=713.18 Aligned_cols=526 Identities=40% Similarity=0.645 Sum_probs=464.6
Q ss_pred CCCCCccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccC
Q 006442 91 ASSISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEF 170 (645)
Q Consensus 91 ~~~~~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~ 170 (645)
+......+.++|++++|.+..+++|+.|++++|+.|||+|+|||||||+|++|.|-..|..- +..+..+.++.
T Consensus 69 s~~~s~dvk~~sls~s~~g~~l~kd~~~El~~g~rygLiG~nG~Gkst~L~~i~~~e~P~p~-------~~d~y~ls~e~ 141 (614)
T KOG0927|consen 69 SHPISRDVKIESLSLSFHGVELIKDVTLELNRGRRYGLIGPNGSGKSTFLRAIAGREVPIPE-------HIDFYLLSREI 141 (614)
T ss_pred cCcccccceeeeeeeccCCceeeeeeeEEecCCceEEEEcCCCCcHhHHHHHHhcCCCCCCc-------ccchhhhcccC
Confidence 33556679999999999999999999999999999999999999999999999998888432 33456667765
Q ss_pred ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCc
Q 006442 171 EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTA 250 (645)
Q Consensus 171 ~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~ 250 (645)
......+|..-++....+........+++...++. ...++++.++.+....+....+.++.++|..+|+..
T Consensus 142 ~ps~~~av~~v~~~~~~e~~rle~~~E~l~~~~d~---------~~~~~l~~~~~r~~~~d~~~~~~k~~~il~glgf~~ 212 (614)
T KOG0927|consen 142 EPSEKQAVQAVVMETDHERKRLEYLAEDLAQACDD---------KEKDELDELYERLDEMDNDTFEAKAAKILHGLGFLS 212 (614)
T ss_pred CCchHHHHHHHhhhhHHHHHHHHHHHHHHHhhccc---------hhhhHHHHHHHHHHhhCchhHHHHHHHHHHhcCCCH
Confidence 44333344444445554444444444444443322 123445556677788899999999999999999999
Q ss_pred ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCC-eEEEEecCHHHHHhhcCeEEEE
Q 006442 251 DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDV-PMVIISHDRAFLDQLCTKIVET 329 (645)
Q Consensus 251 ~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~-tvIivsHd~~~l~~~~d~i~~l 329 (645)
+..++.+.+||||||+|++|||+|+.+|++|||||||||||++++.||.++|.++.. ++|+++|+.+|++.+|++|+.+
T Consensus 213 ~m~~k~~~~~SgGwrmR~aLAr~Lf~kP~LLLLDEPtnhLDleA~~wLee~L~k~d~~~lVi~sh~QDfln~vCT~Ii~l 292 (614)
T KOG0927|consen 213 EMQDKKVKDLSGGWRMRAALARALFQKPDLLLLDEPTNHLDLEAIVWLEEYLAKYDRIILVIVSHSQDFLNGVCTNIIHL 292 (614)
T ss_pred hHHHHHhhccCchHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHhccCceEEEEecchhhhhhHhhhhhee
Confidence 999999999999999999999999999999999999999999999999999998877 8999999999999999999999
Q ss_pred cCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CchhhHHHHHHHHHHHHHhhhhcccccc
Q 006442 330 EMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAG--ANSGRASSAEKKLERLQEEEQIEKPFQR 407 (645)
Q Consensus 330 ~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~l~rl~~~~~~~~~~~~ 407 (645)
++++...|.|||++|...+.++...+..+|+|++++++....++.+...+ ...+++.+.++.+.++++....+++..+
T Consensus 293 ~~kkl~~y~Gnydqy~~tr~E~~~~q~K~~~kqqk~i~~~K~~ia~~g~g~a~~~rka~s~~K~~~km~~~gL~ek~~~~ 372 (614)
T KOG0927|consen 293 DNKKLIYYEGNYDQYVKTRSELEENQMKAYEKQQKQIAHMKDLIARFGHGSAKLGRKAQSKEKTLDKMEADGLTEKVVGE 372 (614)
T ss_pred cccceeeecCCHHHHhhHHHHHhHHHHHHHHHHHhHHHHhhHHHHhhcccchhhhHHHhhhhhhHHHHhhccccccccCC
Confidence 99999999999999999999999999999999999999999999998765 3446788889999999888888888888
Q ss_pred cceEEeccCCCCCCCcEEEEEeeeeeeCCe-eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECce
Q 006442 408 KQMKIRFPERGRSGRSVVTIKNLEFGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH 486 (645)
Q Consensus 408 ~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~-~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~ 486 (645)
+...+.||..+..+.++|.++|++|+|.++ .++++++|-|..++++++|||||||||||||+++|.+.|..|.|....+
T Consensus 373 k~l~~~f~~vg~~p~pvi~~~nv~F~y~~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H 452 (614)
T KOG0927|consen 373 KVLSFRFPEVGKIPPPVIMVQNVSFGYSDNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH 452 (614)
T ss_pred ceEEEEcccccCCCCCeEEEeccccCCCCcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc
Confidence 889999999888889999999999999876 5899999999999999999999999999999999999999999987655
Q ss_pred ecccchhccchhhcCCCCCCHHHHHHhhhcc-ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeE
Q 006442 487 NVLPNYFEQNQAEALDLDKTVLETVAEAAED-WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (645)
Q Consensus 487 ~~~~~~~~q~~~~~l~~~~tv~e~v~~~~~~-~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 565 (645)
... .+|.|+..+.++.+.++.+++...... +..++++.+|++||+..+..+.++++||+|||.||++|++++++|.||
T Consensus 453 ~~~-~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~p~~~LS~Gqr~rVlFa~l~~kqP~lL 531 (614)
T KOG0927|consen 453 NKL-PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVVPMSQLSDGQRRRVLFARLAVKQPHLL 531 (614)
T ss_pred ccc-hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccccchhhcccccchhHHHHHHHhcCCcEE
Confidence 543 488999888999999999999988774 778899999999999888899999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHHHh
Q 006442 566 VLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSLWF 633 (645)
Q Consensus 566 lLDEPt~~LD~~s~~~l~~~l~~~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~~~ 633 (645)
||||||||||.++...+.++|++|.++||+||||..+|.++++++|+.++|.+..+.|+|.+|.+...
T Consensus 532 lLDEPtnhLDi~tid~laeaiNe~~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~~yk~~l~ 599 (614)
T KOG0927|consen 532 LLDEPTNHLDIETIDALAEAINEFPGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIEIYKEHLK 599 (614)
T ss_pred EecCCCcCCCchhHHHHHHHHhccCCceeeeechhhHHHHHHHHhHhhccCceeecCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999975443
No 7
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=7.6e-86 Score=746.64 Aligned_cols=526 Identities=32% Similarity=0.522 Sum_probs=400.6
Q ss_pred ccEEEEeEEEEeC-CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCccCC
Q 006442 96 SGVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSM 174 (645)
Q Consensus 96 ~~i~i~nls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~ 174 (645)
.+|+++|++++|+ ++++|+|+||+|++|++++|+|+|||||||||++|+|+++|++|+|.+++ ...|||++|++.+++
T Consensus 3 ~~i~~~nls~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~~~i~~v~Q~~~~~~ 81 (552)
T TIGR03719 3 YIYTMNRVSKVVPPKKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-GIKVGYLPQEPQLDP 81 (552)
T ss_pred EEEEEeeEEEecCCCCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-CCEEEEEeccCCCCC
Confidence 3699999999998 67899999999999999999999999999999999999999999999874 457999999998888
Q ss_pred CCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCccccc
Q 006442 175 SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGD 254 (645)
Q Consensus 175 ~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~ 254 (645)
+.||.||+...+................+... . +.....+.....+....+.++.+.++.++.+++..+|+. ..+
T Consensus 82 ~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~ 156 (552)
T TIGR03719 82 TKTVRENVEEGVAEIKDALDRFNEISAKFAEP--D-ADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCP--PWD 156 (552)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhccC--c-hhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCC--ccc
Confidence 89999998643221000000000000000000 0 000001111222223334455566677888999999994 358
Q ss_pred ccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCcee
Q 006442 255 RLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVS 334 (645)
Q Consensus 255 ~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~i~~l~~G~~ 334 (645)
+++.+|||||||||+|||||+.+|++|||||||++||+.++++|.++|++.+.|||+||||++++..+||+|+++++|++
T Consensus 157 ~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~~~tvIiisHd~~~~~~~~d~v~~l~~g~i 236 (552)
T TIGR03719 157 ADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEYPGTVVAVTHDRYFLDNVAGWILELDRGRG 236 (552)
T ss_pred CchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEECCEE
Confidence 88999999999999999999999999999999999999999999999988778999999999999999999999999998
Q ss_pred EEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHhhhhcccccccceEEec
Q 006442 335 RTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRF 414 (645)
Q Consensus 335 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~ 414 (645)
..+.|+|+.|..........+...+.+.++++.+....+.+.... .........+.++++.+. ..+...+..++.+
T Consensus 237 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 312 (552)
T TIGR03719 237 IPWEGNYSSWLEQKEKRLEQEEKEESARQKALKRELEWVRSSPKA-RQAKSKARLARYEELLSQ---EFQKRNETAEIYI 312 (552)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHhhhhh---cccccCCCceeec
Confidence 778999999887665444444455555555554443333221000 000111111222222211 1111111122233
Q ss_pred cCCCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecccchhc
Q 006442 415 PERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFE 494 (645)
Q Consensus 415 p~~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~ 494 (645)
+.....++++|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ ++..+|++
T Consensus 313 ~~~~~~~~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~~~i~~v~ 391 (552)
T TIGR03719 313 PPGPRLGDKVIEAENLSKGFGDKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-TVKLAYVD 391 (552)
T ss_pred CCCCCCCCeEEEEeeEEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-ceEEEEEe
Confidence 33323356789999999999888899999999999999999999999999999999999999999999954 44567888
Q ss_pred cchhhcCCCCCCHHHHHHhhhcc----ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCC
Q 006442 495 QNQAEALDLDKTVLETVAEAAED----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (645)
Q Consensus 495 q~~~~~l~~~~tv~e~v~~~~~~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 570 (645)
|+. ..+.+..|+.+++...... .....+..+++.+++.....++++.+|||||||||+|||||+.+|++||||||
T Consensus 392 q~~-~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEP 470 (552)
T TIGR03719 392 QSR-DALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGSDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEP 470 (552)
T ss_pred CCc-cccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCC
Confidence 763 2356778999999865321 11234567899999954457899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhCCEEEEEeC-CeEEeeCCChhHHHHHHh
Q 006442 571 TNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKG-SNLQDYAGDYNQVQSLWF 633 (645)
Q Consensus 571 t~~LD~~s~~~l~~~l~~~~~tvi~vsHd~~~i~~~~d~v~~l~~-g~i~~~~~~~~~~~~~~~ 633 (645)
|+|||+.+++.+.+.|.++.+|||+||||++++.++||++++|++ |++..+.|++++|.+...
T Consensus 471 t~~LD~~~~~~l~~~l~~~~~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~~~~ 534 (552)
T TIGR03719 471 TNDLDVETLRALEEALLEFAGCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEEDKK 534 (552)
T ss_pred CCCCCHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHHHHH
Confidence 999999999999999999988999999999999999999999986 688888899998876544
No 8
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.9e-83 Score=738.06 Aligned_cols=520 Identities=29% Similarity=0.488 Sum_probs=399.7
Q ss_pred CCccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCccC
Q 006442 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVS 173 (645)
Q Consensus 94 ~~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~ 173 (645)
...+|+++|++|+|+++++|+|+||+|++|+++||||+|||||||||++|+|... .| + ....+|+|++|++. .
T Consensus 174 ~~~~I~i~nls~~y~~~~ll~~isl~i~~Ge~~gLvG~NGsGKSTLLr~l~g~~~--~g---~-p~~g~I~~~~Q~~~-g 246 (718)
T PLN03073 174 AIKDIHMENFSISVGGRDLIVDASVTLAFGRHYGLVGRNGTGKTTFLRYMAMHAI--DG---I-PKNCQILHVEQEVV-G 246 (718)
T ss_pred CceeEEEceEEEEeCCCEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CC---C-CCCCEEEEEeccCC-C
Confidence 4557999999999998889999999999999999999999999999999999741 13 1 13456889999854 3
Q ss_pred CCCCHHHHHHHhhHHHHHHHHH-HHHHHHH--H--h----------hccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 174 MSRTVREEFMSAFKEEMEIAGK-LERVQKA--L--E----------SAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 174 ~~~Tv~eni~~~~~~~~~~~~~-~~~~~~~--~--~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
...|+.+.+............. ...+.+. + . ...... ..+.++...+.......+.|.++.+
T Consensus 247 ~~~t~~~~v~~~~~~~~~~~~~~~~~~~q~~~l~~~~~~~~~~~~~~~~~~~---~~~~~r~~~~~~~~~~~~~~~~~~r 323 (718)
T PLN03073 247 DDTTALQCVLNTDIERTQLLEEEAQLVAQQRELEFETETGKGKGANKDGVDK---DAVSQRLEEIYKRLELIDAYTAEAR 323 (718)
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccch---HHHHHHHHHHHHHHHhcCcchHHHH
Confidence 4567877654322111111000 0000000 0 0 000000 1122333444455566778899999
Q ss_pred HHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHH
Q 006442 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAF 318 (645)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~ 318 (645)
+.++|..+||.....++++.+|||||||||+|||||+.+|++|||||||+|||+.++.||.++|++.+.|||+||||+++
T Consensus 324 ~~~~L~~lgl~~~~~~~~~~~LSgG~k~rv~LA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~tviivsHd~~~ 403 (718)
T PLN03073 324 AASILAGLSFTPEMQVKATKTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLETYLLKWPKTFIVVSHAREF 403 (718)
T ss_pred HHHHHHHCCCChHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence 99999999997667889999999999999999999999999999999999999999999999999889999999999999
Q ss_pred HHhhcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-hhhHHHHHHHHHHHHH
Q 006442 319 LDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGAN-SGRASSAEKKLERLQE 397 (645)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~rl~~ 397 (645)
+..+||+|+++++|++..|.|+|+.|..........+.+.|+.++++.++++..+++.+..+. +..+.+..+.++++..
T Consensus 404 l~~~~d~i~~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~e~~~k~~~~l~~~i~~~~~~a~~~~~~~s~~k~l~~~~~ 483 (718)
T PLN03073 404 LNTVVTDILHLHGQKLVTYKGDYDTFERTREEQLKNQQKAFESNERSRSHMQAFIDKFRYNAKRASLVQSRIKALDRLGH 483 (718)
T ss_pred HHHhCCEEEEEECCEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHhhcchHHHHHhh
Confidence 999999999999999988999999998877777777778888888888777777766443211 1122222333444322
Q ss_pred hhhhcccccccceEEeccCC-CCCCCcEEEEEeeeeeeCC-eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC
Q 006442 398 EEQIEKPFQRKQMKIRFPER-GRSGRSVVTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK 475 (645)
Q Consensus 398 ~~~~~~~~~~~~~~~~~p~~-~~~~~~~i~~~~v~~~y~~-~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~ 475 (645)
.. .+.......+.+|.. ..+++++|+++|+++.|++ +.+|+++||+|++|++++|+|||||||||||++|+|+++
T Consensus 484 ~~---~~~~~~~~~~~~~~~~~~~~~~~L~~~~ls~~y~~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~ 560 (718)
T PLN03073 484 VD---AVVNDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ 560 (718)
T ss_pred hh---ccccCCCceeecCCCccCCCCceEEEEeeEEEeCCCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC
Confidence 11 111111222334432 2345678999999999964 569999999999999999999999999999999999999
Q ss_pred CCeeEEEECceecccchhccchhhcCCCCCCHHHHHHh----hhccccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHH
Q 006442 476 PRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAE----AAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKAR 551 (645)
Q Consensus 476 p~~G~i~~~g~~~~~~~~~q~~~~~l~~~~tv~e~v~~----~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqr 551 (645)
|++|+|.+++. ...+|++|+.... .++.++... ........++..+|+.+++..+..++++.+||||||||
T Consensus 561 p~~G~I~~~~~-~~igyv~Q~~~~~----l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~~~~~~~LSgGqkqR 635 (718)
T PLN03073 561 PSSGTVFRSAK-VRMAVFSQHHVDG----LDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSR 635 (718)
T ss_pred CCCceEEECCc-eeEEEEecccccc----CCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHhcCCccccCHHHHHH
Confidence 99999998763 3567888764222 233333221 11123356788999999996556789999999999999
Q ss_pred HHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 552 LAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 552 v~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
|+|||||+.+|++|||||||+|||+.+++.+.+.|.++++|||+||||++++..+||++++|++|+++.+.|++++|.+.
T Consensus 636 vaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~~~ 715 (718)
T PLN03073 636 VAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLFQGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYKKT 715 (718)
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHHHH
Confidence 99999999999999999999999999999999999988789999999999999999999999999998788999988653
No 9
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2e-81 Score=679.59 Aligned_cols=454 Identities=23% Similarity=0.371 Sum_probs=362.5
Q ss_pred ccEEEEeEEEEeCCe----eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCC----ccEEEEcCCC-------
Q 006442 96 SGVKLENISKSYKGV----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD----SGNVIKAKSN------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~----~G~I~~~~~~------- 160 (645)
+.|+++|+++.|... .+++||||+|.+||++||||.+||||||+.++|.|++++. +|+|.++|.+
T Consensus 4 ~lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~ 83 (539)
T COG1123 4 PLLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSER 83 (539)
T ss_pred ceEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHH
Confidence 369999999999542 5999999999999999999999999999999999999987 8999998752
Q ss_pred -------ceEEEEeccCcc--CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCC
Q 006442 161 -------MKIAFLSQEFEV--SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN 231 (645)
Q Consensus 161 -------~~i~~v~Q~~~~--~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (645)
..|+|+||+|.- .+..||.+-|...+.- .....
T Consensus 84 ~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~--------------------------------------h~~~~ 125 (539)
T COG1123 84 EMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRL--------------------------------------HGKGS 125 (539)
T ss_pred HHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHH--------------------------------------hcccc
Confidence 369999999843 3445776665422110 00111
Q ss_pred hhcHHHHHHhhchhcCCCcccc-cccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCC
Q 006442 232 LDTLDAKVSKLMPELGFTADDG-DRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQD 306 (645)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~~~~-~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g 306 (645)
..+.++++.++|+.+|+++... ++++++|||||||||.||+||+++|++||+||||.+||+.+..++.++|+ +.|
T Consensus 126 ~~ea~~~a~elL~~Vgl~~~~~~~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g 205 (539)
T COG1123 126 RAEARKRAVELLEQVGLPDPERRDRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELG 205 (539)
T ss_pred HHHHHHHHHHHHHHcCCCChhhhccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcC
Confidence 3355678889999999986655 47999999999999999999999999999999999999999999988874 479
Q ss_pred CeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHH
Q 006442 307 VPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRAS 386 (645)
Q Consensus 307 ~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 386 (645)
.++|+||||++.+.++||||++|.+|++. -.|..++.+.+... .| +..++...
T Consensus 206 ~a~l~ITHDl~Vva~~aDrv~Vm~~G~iV-E~G~~~~i~~~p~h-------pY---------T~~Ll~a~---------- 258 (539)
T COG1123 206 MAVLFITHDLGVVAELADRVVVMYKGEIV-ETGPTEEILSNPQH-------PY---------TRGLLAAV---------- 258 (539)
T ss_pred cEEEEEcCCHHHHHHhcCeEEEEECCEEE-EecCHHHHHhccCC-------cc---------cHHHHhhC----------
Confidence 99999999999999999999999999984 44554433221110 00 00011000
Q ss_pred HHHHHHHHHHHhhhhcccccccceEEeccCCCCCCCcEEEEEeeeeeeCC-----------eeceeeeeEEEecCcEEEE
Q 006442 387 SAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED-----------RLLFNRANLTIERGEKTAI 455 (645)
Q Consensus 387 ~~~~~l~rl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~-----------~~~l~~vsl~i~~Ge~v~i 455 (645)
+.....+..... +.......++++++|+++.|.. ..+++||||+|.+||++||
T Consensus 259 ---------------p~~~~~~~~~~~-~~~~~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lgl 322 (539)
T COG1123 259 ---------------PRLGDEKIIRLP-RRGPLRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGL 322 (539)
T ss_pred ---------------CCcccccccccc-cccccccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEE
Confidence 000000000000 0011126788999999999973 2579999999999999999
Q ss_pred EcCCCCcHHHHHHHHHcCCCCCeeEEEECceec------------ccchhccchhhcCCCCCCHHHHHHhhhcc------
Q 006442 456 IGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV------------LPNYFEQNQAEALDLDKTVLETVAEAAED------ 517 (645)
Q Consensus 456 ~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~------------~~~~~~q~~~~~l~~~~tv~e~v~~~~~~------ 517 (645)
||+||||||||.|+|+|+++|++|+|.++|.++ ...+++|++...+++..||.+++......
T Consensus 323 VGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~ 402 (539)
T COG1123 323 VGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSG 402 (539)
T ss_pred ECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccch
Confidence 999999999999999999999999999998762 12356788888899999999999875421
Q ss_pred -ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHh----cCce
Q 006442 518 -WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISE----YKGT 592 (645)
Q Consensus 518 -~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~----~~~t 592 (645)
...+.+.++|++.++..+..+++|++||||||||+||||||+.+|++||+|||||.||+..+..+.++|.+ ++.|
T Consensus 403 ~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t 482 (539)
T COG1123 403 AERRARVAELLELVGLPPEFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLT 482 (539)
T ss_pred HHHHHHHHHHHHHcCCCHHHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCE
Confidence 12235788899999988889999999999999999999999999999999999999999999999988864 4679
Q ss_pred EEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 593 VITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 593 vi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
.|+||||+.++..+||||++|++|+|++. |+.+..++.
T Consensus 483 ~lfISHDl~vV~~i~drv~vm~~G~iVE~-G~~~~v~~~ 520 (539)
T COG1123 483 YLFISHDLAVVRYIADRVAVMYDGRIVEE-GPTEKVFEN 520 (539)
T ss_pred EEEEeCCHHHHHhhCceEEEEECCeEEEe-CCHHHHhcC
Confidence 99999999999999999999999999974 566665543
No 10
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-81 Score=715.27 Aligned_cols=471 Identities=18% Similarity=0.316 Sum_probs=357.6
Q ss_pred CccEEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCC-----------
Q 006442 95 SSGVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKS----------- 159 (645)
Q Consensus 95 ~~~i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~----------- 159 (645)
.++|+++|++++|++ .++|+||||+|++|+++||+|+||||||||+++|+|+++|++|+|.+++.
T Consensus 10 ~~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~ 89 (623)
T PRK10261 10 RDVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIE 89 (623)
T ss_pred CceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccc
Confidence 457999999999963 46999999999999999999999999999999999999999999987652
Q ss_pred -------------CceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHH
Q 006442 160 -------------NMKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQ 224 (645)
Q Consensus 160 -------------~~~i~~v~Q~~--~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (645)
...|||++|+| .+++..||.||+...... .
T Consensus 90 ~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~---------------~-------------------- 134 (623)
T PRK10261 90 LSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRL---------------H-------------------- 134 (623)
T ss_pred cccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHH---------------h--------------------
Confidence 12599999998 466778999998632110 0
Q ss_pred HHHHhCChhcHHHHHHhhchhcCCCc--ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH
Q 006442 225 RKAQAVNLDTLDAKVSKLMPELGFTA--DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL 302 (645)
Q Consensus 225 ~~~~~~~~~~~~~~i~~ll~~lgl~~--~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L 302 (645)
..++.....+++.++++.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.++|
T Consensus 135 ---~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll 211 (623)
T PRK10261 135 ---QGASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLI 211 (623)
T ss_pred ---cCCCHHHHHHHHHHHHHHCCCCChhhHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHH
Confidence 00112233456778899999963 3578899999999999999999999999999999999999999999888876
Q ss_pred c----cCCCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 006442 303 G----KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGA 378 (645)
Q Consensus 303 ~----~~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 378 (645)
+ +.|+|||+||||++++.++||+|++|++|++. ..|++.++..... ..|. ..++.....
T Consensus 212 ~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~i~-~~g~~~~~~~~~~-------~~~~---------~~l~~~~~~ 274 (623)
T PRK10261 212 KVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAV-ETGSVEQIFHAPQ-------HPYT---------RALLAAVPQ 274 (623)
T ss_pred HHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCeec-ccCCHHHhhcCCC-------Chhh---------hhhhhccCc
Confidence 4 24899999999999999999999999999984 4677655432110 0000 000000000
Q ss_pred -CCchhhHHHHHHHHHHHHHhhhhcccccccceEEeccCCCCCCCcEEEEEeeeeeeCC-----------eeceeeeeEE
Q 006442 379 -GANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED-----------RLLFNRANLT 446 (645)
Q Consensus 379 -~~~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~-----------~~~l~~vsl~ 446 (645)
....++.. ....+... ...+..... ..++.....++++|+++|+++.|+. +.+|+++||+
T Consensus 275 ~~~~~~~~~--~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~ 346 (623)
T PRK10261 275 LGAMKGLDY--PRRFPLIS----LEHPAKQEP--PIEQDTVVDGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFD 346 (623)
T ss_pred ccccccccC--Cccccccc----cccccccCc--ccccccccCCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeE
Confidence 00000000 00000000 000000000 0001111124578999999999961 4689999999
Q ss_pred EecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-------------cchhccchhhcCCCCCCHHHHHHh
Q 006442 447 IERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------PNYFEQNQAEALDLDKTVLETVAE 513 (645)
Q Consensus 447 i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------~~~~~q~~~~~l~~~~tv~e~v~~ 513 (645)
|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|+....+++..|+.+++..
T Consensus 347 i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~ 426 (623)
T PRK10261 347 LWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIME 426 (623)
T ss_pred EcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999997652 245666543356778899999876
Q ss_pred hhc--c-c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHH
Q 006442 514 AAE--D-W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAI 586 (645)
Q Consensus 514 ~~~--~-~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l 586 (645)
... . . ...++.++|+.+|+..+..++++++|||||||||+|||||+.+|+||||||||++||+.++..+.++|
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll 506 (623)
T PRK10261 427 PLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLL 506 (623)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 421 1 1 12457789999999645679999999999999999999999999999999999999999999999999
Q ss_pred Hh----cCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 587 SE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 587 ~~----~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
++ ++.|||+||||++++.++||||++|++|++++ .|..++++
T Consensus 507 ~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~-~g~~~~i~ 552 (623)
T PRK10261 507 LDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVE-IGPRRAVF 552 (623)
T ss_pred HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHHh
Confidence 64 35699999999999999999999999999985 46555543
No 11
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-81 Score=705.20 Aligned_cols=442 Identities=22% Similarity=0.317 Sum_probs=351.1
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC--CccEEEEcCCC-----------ce
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP--DSGNVIKAKSN-----------MK 162 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p--~~G~I~~~~~~-----------~~ 162 (645)
++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+|+|+|+++| ++|+|.++|.. ..
T Consensus 4 ~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 83 (506)
T PRK13549 4 YLLEMKNITKTFGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAG 83 (506)
T ss_pred ceEEEeeeEEEeCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCC
Confidence 369999999999988899999999999999999999999999999999999996 89999997642 34
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
++|++|++.+++..||+||+....... .. ...+.....+++.++
T Consensus 84 i~~v~q~~~~~~~~tv~e~l~~~~~~~---------------~~---------------------~~~~~~~~~~~~~~~ 127 (506)
T PRK13549 84 IAIIHQELALVKELSVLENIFLGNEIT---------------PG---------------------GIMDYDAMYLRAQKL 127 (506)
T ss_pred eEEEEeccccCCCCcHHHHhhhccccc---------------cc---------------------CCcCHHHHHHHHHHH
Confidence 999999998878899999985321000 00 000111223456778
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFL 319 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l 319 (645)
++.+|+. +..++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|+ +.|+|||+||||++++
T Consensus 128 l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~ 206 (506)
T PRK13549 128 LAQLKLD-INPATPVGNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEV 206 (506)
T ss_pred HHHcCCC-CCcccchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHH
Confidence 8899995 57789999999999999999999999999999999999999999999988774 3588999999999999
Q ss_pred HhhcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHhh
Q 006442 320 DQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEE 399 (645)
Q Consensus 320 ~~~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~ 399 (645)
..+||+|+++++|++. +.|+..++... ..+..+... .
T Consensus 207 ~~~~d~v~~l~~G~i~-~~~~~~~~~~~-----------------------~~~~~~~~~-~------------------ 243 (506)
T PRK13549 207 KAISDTICVIRDGRHI-GTRPAAGMTED-----------------------DIITMMVGR-E------------------ 243 (506)
T ss_pred HHhcCEEEEEECCEEe-eecccccCCHH-----------------------HHHHHhhCc-C------------------
Confidence 9999999999999874 44443322100 000000000 0
Q ss_pred hhcccccccceEEeccC-CCCCCCcEEEEEeeeeeeC---CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC
Q 006442 400 QIEKPFQRKQMKIRFPE-RGRSGRSVVTIKNLEFGYE---DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK 475 (645)
Q Consensus 400 ~~~~~~~~~~~~~~~p~-~~~~~~~~i~~~~v~~~y~---~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~ 475 (645)
.... +|. ....++++|+++|+++.|+ ++.+|+++||+|++||+++|+|+||||||||+++|+|+++
T Consensus 244 -~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~ 313 (506)
T PRK13549 244 -LTAL---------YPREPHTIGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYP 313 (506)
T ss_pred -cccc---------ccccccCCCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCC
Confidence 0000 000 0112456899999999994 4579999999999999999999999999999999999998
Q ss_pred -CCeeEEEECceecc-----------cchhccchh-hcCCCCCCHHHHHHhhhc---------cc--cHHHHHHHHhhcC
Q 006442 476 -PRGGEVLLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAAE---------DW--RIDDIKGLLGRCN 531 (645)
Q Consensus 476 -p~~G~i~~~g~~~~-----------~~~~~q~~~-~~l~~~~tv~e~v~~~~~---------~~--~~~~~~~~L~~~~ 531 (645)
|++|+|.++|.++. .+|++|+.. ..+.+..|+.+|+..... .. ..+.+.++++.++
T Consensus 314 ~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 393 (506)
T PRK13549 314 GRWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLK 393 (506)
T ss_pred CCCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcC
Confidence 59999999987652 245555532 235567899999975320 00 1235778999999
Q ss_pred CChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCC
Q 006442 532 FKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVN 608 (645)
Q Consensus 532 l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d 608 (645)
+..+..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|.++ +.|||+||||++++.++||
T Consensus 394 l~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d 473 (506)
T PRK13549 394 VKTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSD 473 (506)
T ss_pred ccCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCC
Confidence 9534678999999999999999999999999999999999999999999999988754 5699999999999999999
Q ss_pred EEEEEeCCeEEeeCCChhHH
Q 006442 609 RVVEVKGSNLQDYAGDYNQV 628 (645)
Q Consensus 609 ~v~~l~~g~i~~~~~~~~~~ 628 (645)
|+++|++|++.. .++.+++
T Consensus 474 ~v~~l~~G~i~~-~~~~~~~ 492 (506)
T PRK13549 474 RVLVMHEGKLKG-DLINHNL 492 (506)
T ss_pred EEEEEECCEEEE-EeccccC
Confidence 999999999974 4555554
No 12
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-81 Score=699.75 Aligned_cols=442 Identities=20% Similarity=0.340 Sum_probs=350.9
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEE
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~ 164 (645)
++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..|+
T Consensus 4 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~ 83 (510)
T PRK09700 4 PYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGIG 83 (510)
T ss_pred ceEEEeeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCeE
Confidence 46999999999998889999999999999999999999999999999999999999999987632 2599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
|++|++.+++..||+||+......... .... ...+......++.++++
T Consensus 84 ~v~q~~~~~~~~tv~e~l~~~~~~~~~-----------~~~~---------------------~~~~~~~~~~~~~~~l~ 131 (510)
T PRK09700 84 IIYQELSVIDELTVLENLYIGRHLTKK-----------VCGV---------------------NIIDWREMRVRAAMMLL 131 (510)
T ss_pred EEeecccccCCCcHHHHhhhccccccc-----------cccc---------------------cccCHHHHHHHHHHHHH
Confidence 999999887888999998532100000 0000 00011123345678889
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHh
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~ 321 (645)
.+|+. +..++++.+|||||||||+|||||+.+|+||||||||+|||+.++.++.++|+ +.|+|||+||||++++..
T Consensus 132 ~~gl~-~~~~~~~~~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~ 210 (510)
T PRK09700 132 RVGLK-VDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRR 210 (510)
T ss_pred HcCCC-CCcccchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence 99996 56789999999999999999999999999999999999999999999988774 358999999999999999
Q ss_pred hcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHhhhh
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQI 401 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~~ 401 (645)
+||+++++++|++ .+.|+++++.... .+..+... .. . ...
T Consensus 211 ~~d~v~~l~~G~i-~~~g~~~~~~~~~-----------------------~~~~~~~~-~~----------~-----~~~ 250 (510)
T PRK09700 211 ICDRYTVMKDGSS-VCSGMVSDVSNDD-----------------------IVRLMVGR-EL----------Q-----NRF 250 (510)
T ss_pred hCCEEEEEECCEE-eeecchhhCCHHH-----------------------HHHHhcCC-Cc----------c-----ccc
Confidence 9999999999998 4667655432110 00011000 00 0 000
Q ss_pred cccccccceEEeccC-CCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeE
Q 006442 402 EKPFQRKQMKIRFPE-RGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGE 480 (645)
Q Consensus 402 ~~~~~~~~~~~~~p~-~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~ 480 (645)
... .+. ....++++|+++|+++.|+ .+|+++||+|++||+++|+||||||||||+++|+|+++|++|+
T Consensus 251 ~~~---------~~~~~~~~~~~~l~~~~l~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~ 319 (510)
T PRK09700 251 NAM---------KENVSNLAHETVFEVRNVTSRDR--KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGE 319 (510)
T ss_pred ccc---------ccccccCCCCcEEEEeCccccCC--CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCe
Confidence 000 000 1112456899999999874 4899999999999999999999999999999999999999999
Q ss_pred EEECceecc-----------cchhccchh-hcCCCCCCHHHHHHhhhcc---------------ccHHHHHHHHhhcCCC
Q 006442 481 VLLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAAED---------------WRIDDIKGLLGRCNFK 533 (645)
Q Consensus 481 i~~~g~~~~-----------~~~~~q~~~-~~l~~~~tv~e~v~~~~~~---------------~~~~~~~~~L~~~~l~ 533 (645)
|.++|.++. .+|++|... ..+.+..|+.+|+...... .....+.++|+.+++.
T Consensus 320 I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 399 (510)
T PRK09700 320 IRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALK 399 (510)
T ss_pred EEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCC
Confidence 999997652 245565421 3466778999998753210 0113467889999995
Q ss_pred hhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEE
Q 006442 534 ADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRV 610 (645)
Q Consensus 534 ~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v 610 (645)
.+..++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++..+|||+
T Consensus 400 ~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i 479 (510)
T PRK09700 400 CHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRI 479 (510)
T ss_pred CCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEE
Confidence 35679999999999999999999999999999999999999999999999999764 569999999999999999999
Q ss_pred EEEeCCeEEee
Q 006442 611 VEVKGSNLQDY 621 (645)
Q Consensus 611 ~~l~~g~i~~~ 621 (645)
++|++|++...
T Consensus 480 ~~l~~G~i~~~ 490 (510)
T PRK09700 480 AVFCEGRLTQI 490 (510)
T ss_pred EEEECCEEEEE
Confidence 99999999754
No 13
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=5.8e-80 Score=694.77 Aligned_cols=431 Identities=27% Similarity=0.424 Sum_probs=346.6
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCC--CCCccEEEEcC-----------------
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EPDSGNVIKAK----------------- 158 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~--~p~~G~I~~~~----------------- 158 (645)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|++ +|++|+|.+++
T Consensus 1 l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g~ 80 (520)
T TIGR03269 1 IEVKNLTKKFDGKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVGE 80 (520)
T ss_pred CEEEEEEEEECCeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccccc
Confidence 57899999998888999999999999999999999999999999999997 79999998851
Q ss_pred ------C--------------------CceEEEEecc-CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhH
Q 006442 159 ------S--------------------NMKIAFLSQE-FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMD 211 (645)
Q Consensus 159 ------~--------------------~~~i~~v~Q~-~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (645)
. ...++|++|+ +.+++..|+++|+...+..
T Consensus 81 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~----------------------- 137 (520)
T TIGR03269 81 PCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEE----------------------- 137 (520)
T ss_pred ccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHH-----------------------
Confidence 0 1248999997 5666778999998532110
Q ss_pred HHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCC
Q 006442 212 LMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLD 291 (645)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD 291 (645)
...+..+..+++.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||
T Consensus 138 ----------------~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD 200 (520)
T TIGR03269 138 ----------------IGYEGKEAVGRAVDLIEMVQLS-HRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLD 200 (520)
T ss_pred ----------------cCCCHHHHHHHHHHHHHHcCCh-hhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCC
Confidence 0011122345677889999996 56788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006442 292 LDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIE 367 (645)
Q Consensus 292 ~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (645)
+.+++++.++|+ +.|+|||+||||++++.++||+|++|++|++. +.|++.++.....
T Consensus 201 ~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~~~~------------------ 261 (520)
T TIGR03269 201 PQTAKLVHNALEEAVKASGISMVLTSHWPEVIEDLSDKAIWLENGEIK-EEGTPDEVVAVFM------------------ 261 (520)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEeCCEEe-eecCHHHHHHHHH------------------
Confidence 999999977663 35899999999999999999999999999874 4677655422100
Q ss_pred HHHHHHHHhccCCchhhHHHHHHHHHHHHHhhhhcccccccceEEeccCCCCCCCcEEEEEeeeeeeC-----Ceeceee
Q 006442 368 QTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYE-----DRLLFNR 442 (645)
Q Consensus 368 ~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~-----~~~~l~~ 442 (645)
..+ ... .++ .....++++|+++|++++|+ .+.+|++
T Consensus 262 ------~~~----------------~~~------~~~-----------~~~~~~~~~l~~~~l~~~~~~~~~~~~~il~~ 302 (520)
T TIGR03269 262 ------EGV----------------SEV------EKE-----------CEVEVGEPIIKVRNVSKRYISVDRGVVKAVDN 302 (520)
T ss_pred ------hhc----------------hhh------ccc-----------cccCCCCceEEEeccEEEeccCCCCCceEEee
Confidence 000 000 000 00012356899999999995 2579999
Q ss_pred eeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEEC-cee---c-------------ccchhccchhhcCCCCC
Q 006442 443 ANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG-EHN---V-------------LPNYFEQNQAEALDLDK 505 (645)
Q Consensus 443 vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~-g~~---~-------------~~~~~~q~~~~~l~~~~ 505 (645)
+||+|++||+++|+||||||||||+++|+|+++|++|+|.++ |.+ + ..+|++|+ ..+.+..
T Consensus 303 is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~--~~l~~~~ 380 (520)
T TIGR03269 303 VSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQE--YDLYPHR 380 (520)
T ss_pred EEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccC--cccCCCC
Confidence 999999999999999999999999999999999999999995 421 1 12455554 3456778
Q ss_pred CHHHHHHhhhc--c-c--cHHHHHHHHhhcCCCh----hhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCH
Q 006442 506 TVLETVAEAAE--D-W--RIDDIKGLLGRCNFKA----DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 576 (645)
Q Consensus 506 tv~e~v~~~~~--~-~--~~~~~~~~L~~~~l~~----~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~ 576 (645)
|+.+|+..... . . ...++.++|+.+++.. +..++++.+|||||||||+|||||+.+|++|||||||++||+
T Consensus 381 tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~ 460 (520)
T TIGR03269 381 TVLDNLTEAIGLELPDELARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDP 460 (520)
T ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 99999975321 0 1 1235678899999953 256899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh----cCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 577 PSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 577 ~s~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
.+++.+.+.|++ ++.|||+||||++++.++|||+++|++|+++. .|..+++.
T Consensus 461 ~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 516 (520)
T TIGR03269 461 ITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVK-IGDPEEIV 516 (520)
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHHH
Confidence 999999999964 35699999999999999999999999999975 46666544
No 14
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.7e-80 Score=693.93 Aligned_cols=441 Identities=25% Similarity=0.358 Sum_probs=350.2
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceE
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKI 163 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i 163 (645)
.++|+++|++|+|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..+
T Consensus 9 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 9 PPLLCARSISKQYSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred CceEEEEeEEEEeCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 447999999999998889999999999999999999999999999999999999999999998632 259
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhc
Q 006442 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (645)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (645)
+|++|++.+++..||.||+...... ....++++.+++
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~-------------------------------------------~~~~~~~~~~~l 125 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPK-------------------------------------------RQASMQKMKQLL 125 (510)
T ss_pred EEEeccCccCCCCcHHHHhhccccc-------------------------------------------chHHHHHHHHHH
Confidence 9999999888889999998532100 001234456778
Q ss_pred hhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHH
Q 006442 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLD 320 (645)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~ 320 (645)
+.+|+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|+ +.|+|||++|||++++.
T Consensus 126 ~~~~l~-~~~~~~~~~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~ 204 (510)
T PRK15439 126 AALGCQ-LDLDSSAGSLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIR 204 (510)
T ss_pred HHcCCC-ccccCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 888986 56789999999999999999999999999999999999999999999998874 35899999999999999
Q ss_pred hhcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHhhh
Q 006442 321 QLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQ 400 (645)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~ 400 (645)
.+||+|+++++|++. +.|+++++..... ++.+....... .+...
T Consensus 205 ~~~d~i~~l~~G~i~-~~g~~~~~~~~~~-----------------------~~~~~~~~~~~-------~~~~~----- 248 (510)
T PRK15439 205 QLADRISVMRDGTIA-LSGKTADLSTDDI-----------------------IQAITPAAREK-------SLSAS----- 248 (510)
T ss_pred HhCCEEEEEECCEEE-EecChHHcCHHHH-----------------------HHHHhCccccc-------ccccc-----
Confidence 999999999999984 5677665432110 00000000000 00000
Q ss_pred hcccccccceEEeccC---CCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC
Q 006442 401 IEKPFQRKQMKIRFPE---RGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR 477 (645)
Q Consensus 401 ~~~~~~~~~~~~~~p~---~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~ 477 (645)
... ...+|. ....++++|+++|++. .+|+++||+|++|+++||+||||||||||+++|+|+++|+
T Consensus 249 -~~~------~~~~~~~~~~~~~~~~~l~~~~l~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~ 316 (510)
T PRK15439 249 -QKL------WLELPGNRRQQAAGAPVLTVEDLTG-----EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPAR 316 (510)
T ss_pred -ccc------cccccccccccCCCCceEEEeCCCC-----CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC
Confidence 000 000111 1113456899999994 2699999999999999999999999999999999999999
Q ss_pred eeEEEECceecc-----------cchhccchh-hcCCCCCCHHHHHHhh----hcc---c--cHHHHHHHHhhcCCChhh
Q 006442 478 GGEVLLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEA----AED---W--RIDDIKGLLGRCNFKADM 536 (645)
Q Consensus 478 ~G~i~~~g~~~~-----------~~~~~q~~~-~~l~~~~tv~e~v~~~----~~~---~--~~~~~~~~L~~~~l~~~~ 536 (645)
+|+|.++|.++. .+|++|... ..+++..|+.+|+... ... . ..+.+.++|+.+++....
T Consensus 317 ~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 396 (510)
T PRK15439 317 GGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNH 396 (510)
T ss_pred CcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCC
Confidence 999999997652 245665431 3466678999998532 000 1 123467889999995356
Q ss_pred hccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEE
Q 006442 537 LDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEV 613 (645)
Q Consensus 537 ~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l 613 (645)
.++++.+|||||||||+|||||+.+|+||||||||+|||+.+++.+.+.|+++ +.|||+||||++++.++|||+++|
T Consensus 397 ~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l 476 (510)
T PRK15439 397 AEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVM 476 (510)
T ss_pred ccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEE
Confidence 79999999999999999999999999999999999999999999999998864 569999999999999999999999
Q ss_pred eCCeEEeeCCChhHH
Q 006442 614 KGSNLQDYAGDYNQV 628 (645)
Q Consensus 614 ~~g~i~~~~~~~~~~ 628 (645)
++|+++. .+..+++
T Consensus 477 ~~G~i~~-~~~~~~~ 490 (510)
T PRK15439 477 HQGEISG-ALTGAAI 490 (510)
T ss_pred ECCEEEE-EEccccC
Confidence 9999985 3444443
No 15
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4.8e-80 Score=696.58 Aligned_cols=445 Identities=20% Similarity=0.359 Sum_probs=349.7
Q ss_pred ccEEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC------
Q 006442 96 SGVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN------ 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~------ 160 (645)
++|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~ 83 (529)
T PRK15134 4 PLLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASE 83 (529)
T ss_pred ceEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCH
Confidence 36999999999963 5799999999999999999999999999999999999986 79999987632
Q ss_pred --------ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhC
Q 006442 161 --------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAV 230 (645)
Q Consensus 161 --------~~i~~v~Q~~~--~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (645)
.+|||++|++. +.+..|+.+|+...... . ..+
T Consensus 84 ~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~---------------~-----------------------~~~ 125 (529)
T PRK15134 84 QTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSL---------------H-----------------------RGM 125 (529)
T ss_pred HHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHH---------------h-----------------------cCC
Confidence 25999999975 44556888886421100 0 001
Q ss_pred ChhcHHHHHHhhchhcCCCc--ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----
Q 006442 231 NLDTLDAKVSKLMPELGFTA--DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---- 304 (645)
Q Consensus 231 ~~~~~~~~i~~ll~~lgl~~--~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---- 304 (645)
......+++.++++.+|+.. ...++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|++
T Consensus 126 ~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~ 205 (529)
T PRK15134 126 RREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQE 205 (529)
T ss_pred CHHHHHHHHHHHHHHCCCCChHHHHhhCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHh
Confidence 11233456778889999963 146889999999999999999999999999999999999999999999988754
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhh
Q 006442 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGR 384 (645)
Q Consensus 305 ~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 384 (645)
.|+|||+||||++++..+||+|++|++|++. +.|...++..... ..+ ......
T Consensus 206 ~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~~~~-------~~~---------~~~~~~---------- 258 (529)
T PRK15134 206 LNMGLLFITHNLSIVRKLADRVAVMQNGRCV-EQNRAATLFSAPT-------HPY---------TQKLLN---------- 258 (529)
T ss_pred cCCeEEEEcCcHHHHHHhcCEEEEEECCEEE-EeCCHHHHhhCCC-------CHH---------HHHHHH----------
Confidence 4899999999999999999999999999974 4454433221000 000 000000
Q ss_pred HHHHHHHHHHHHHhhhhcccccccceEEeccCCCCCCCcEEEEEeeeeeeC-----------CeeceeeeeEEEecCcEE
Q 006442 385 ASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYE-----------DRLLFNRANLTIERGEKT 453 (645)
Q Consensus 385 ~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~-----------~~~~l~~vsl~i~~Ge~v 453 (645)
. .+...+ . +. ...+.++|+++|+++.|+ ++.+|+++||+|++||++
T Consensus 259 -------------~----~~~~~~---~--~~-~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~ 315 (529)
T PRK15134 259 -------------S----EPSGDP---V--PL-PEPASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETL 315 (529)
T ss_pred -------------h----Cccccc---c--cc-CCCCCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEE
Confidence 0 000000 0 00 112456899999999995 357999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-------------cchhccchhhcCCCCCCHHHHHHhhhcc---
Q 006442 454 AIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------PNYFEQNQAEALDLDKTVLETVAEAAED--- 517 (645)
Q Consensus 454 ~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------~~~~~q~~~~~l~~~~tv~e~v~~~~~~--- 517 (645)
+|+||||||||||+++|+|+++ ++|+|+++|.++. .+|++|+....+.+..|+.+|+......
T Consensus 316 ~i~G~nGsGKSTLlk~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~ 394 (529)
T PRK15134 316 GLVGESGSGKSTTGLALLRLIN-SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQP 394 (529)
T ss_pred EEECCCCCCHHHHHHHHhCcCC-CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccc
Confidence 9999999999999999999985 8999999997642 2455665422466678999999764210
Q ss_pred -c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---
Q 006442 518 -W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--- 589 (645)
Q Consensus 518 -~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--- 589 (645)
. ....+.++|+.+++..+..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|+++
T Consensus 395 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~ 474 (529)
T PRK15134 395 TLSAAQREQQVIAVMEEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQK 474 (529)
T ss_pred cCChHHHHHHHHHHHHHcCCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHh
Confidence 1 12457789999999645678999999999999999999999999999999999999999999999999753
Q ss_pred -CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 590 -KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 590 -~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
+.|||+||||++++..+|||+++|++|+++. .|+.+++++
T Consensus 475 ~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~ 515 (529)
T PRK15134 475 HQLAYLFISHDLHVVRALCHQVIVLRQGEVVE-QGDCERVFA 515 (529)
T ss_pred hCCEEEEEeCCHHHHHHhcCeEEEEECCEEEE-EcCHHHHhc
Confidence 5699999999999999999999999999975 466666543
No 16
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.6e-80 Score=694.31 Aligned_cols=432 Identities=24% Similarity=0.379 Sum_probs=344.1
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEE
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~ 164 (645)
++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++
T Consensus 3 ~~i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 82 (501)
T PRK10762 3 ALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGIG 82 (501)
T ss_pred ceEEEeeeEEEeCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCEE
Confidence 36999999999998889999999999999999999999999999999999999999999998632 2599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
|++|++.+++..||+||+....... ... ...+....++++.++++
T Consensus 83 ~v~q~~~~~~~~tv~e~l~~~~~~~-----------~~~------------------------~~~~~~~~~~~~~~~l~ 127 (501)
T PRK10762 83 IIHQELNLIPQLTIAENIFLGREFV-----------NRF------------------------GRIDWKKMYAEADKLLA 127 (501)
T ss_pred EEEcchhccCCCcHHHHhhhccccc-----------ccc------------------------CccCHHHHHHHHHHHHH
Confidence 9999998888899999985321000 000 00011122345677888
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHh
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~ 321 (645)
.+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|+ +.|.|||+||||++++..
T Consensus 128 ~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~ 206 (501)
T PRK10762 128 RLNLR-FSSDKLVGELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFE 206 (501)
T ss_pred HcCCC-CCccCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 99996 56788999999999999999999999999999999999999999999987764 358899999999999999
Q ss_pred hcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHhhhh
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQI 401 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~~ 401 (645)
+||+|+++++|++. ..|...+.... ......... + .
T Consensus 207 ~~d~i~~l~~G~i~-~~~~~~~~~~~-----------------------~~~~~~~~~--------------~------~ 242 (501)
T PRK10762 207 ICDDVTVFRDGQFI-AEREVADLTED-----------------------SLIEMMVGR--------------K------L 242 (501)
T ss_pred hCCEEEEEeCCEEE-EecCcCcCCHH-----------------------HHHHHhcCC--------------C------c
Confidence 99999999999874 33432221100 000000000 0 0
Q ss_pred cccccccceEEeccCCCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEE
Q 006442 402 EKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV 481 (645)
Q Consensus 402 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i 481 (645)
..+. + ..+ ..+++++|+++|+++ .+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|
T Consensus 243 ~~~~--~----~~~--~~~~~~~l~~~~l~~-----~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I 309 (501)
T PRK10762 243 EDQY--P----RLD--KAPGEVRLKVDNLSG-----PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYV 309 (501)
T ss_pred cccc--c----ccc--cCCCCcEEEEeCccc-----CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEE
Confidence 0000 0 000 112346899999985 36999999999999999999999999999999999999999999
Q ss_pred EECceecc-----------cchhccchh-hcCCCCCCHHHHHHhhhc----c--------ccHHHHHHHHhhcCCChhhh
Q 006442 482 LLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAAE----D--------WRIDDIKGLLGRCNFKADML 537 (645)
Q Consensus 482 ~~~g~~~~-----------~~~~~q~~~-~~l~~~~tv~e~v~~~~~----~--------~~~~~~~~~L~~~~l~~~~~ 537 (645)
.++|.++. .+|++|+.. ..+.+..|+.+|+..... . ...+.+.++|+.+++..+..
T Consensus 310 ~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 389 (501)
T PRK10762 310 TLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSM 389 (501)
T ss_pred EECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCc
Confidence 99997652 345666532 245677899999875311 0 11235778999999953457
Q ss_pred ccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEe
Q 006442 538 DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVK 614 (645)
Q Consensus 538 ~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~ 614 (645)
++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++.++||++++|+
T Consensus 390 ~~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~ 469 (501)
T PRK10762 390 EQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMH 469 (501)
T ss_pred cCchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEE
Confidence 8999999999999999999999999999999999999999999999999875 4599999999999999999999999
Q ss_pred CCeEEe
Q 006442 615 GSNLQD 620 (645)
Q Consensus 615 ~g~i~~ 620 (645)
+|++..
T Consensus 470 ~G~i~~ 475 (501)
T PRK10762 470 EGRISG 475 (501)
T ss_pred CCEEEE
Confidence 999974
No 17
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.8e-80 Score=693.25 Aligned_cols=436 Identities=24% Similarity=0.340 Sum_probs=344.2
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC--CccEEEEcCCC-----------ceEE
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP--DSGNVIKAKSN-----------MKIA 164 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p--~~G~I~~~~~~-----------~~i~ 164 (645)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.. ..|+
T Consensus 2 l~i~~l~~~~~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 81 (500)
T TIGR02633 2 LEMKGIVKTFGGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIV 81 (500)
T ss_pred EEEEeEEEEeCCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEE
Confidence 7899999999988899999999999999999999999999999999999987 79999997632 3599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
|++|++.+++..||.||+....... ... ..........++.++++
T Consensus 82 ~v~q~~~~~~~~tv~~~l~~~~~~~-------------~~~----------------------~~~~~~~~~~~~~~~l~ 126 (500)
T TIGR02633 82 IIHQELTLVPELSVAENIFLGNEIT-------------LPG----------------------GRMAYNAMYLRAKNLLR 126 (500)
T ss_pred EEeeccccCCCCcHHHHHHhhcccc-------------ccc----------------------cccCHHHHHHHHHHHHH
Confidence 9999998878899999985321000 000 00001122345677888
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHh
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~ 321 (645)
.+|+.....++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|+ +.|+|||+||||++++..
T Consensus 127 ~~~l~~~~~~~~~~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~ 206 (500)
T TIGR02633 127 ELQLDADNVTRPVGDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKA 206 (500)
T ss_pred HcCCCCCcccCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHH
Confidence 89986433467799999999999999999999999999999999999999999988864 468999999999999999
Q ss_pred hcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHhhhh
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQI 401 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~~ 401 (645)
+||+|+++++|++. +.+...++... ..+..+... . .
T Consensus 207 ~~d~i~~l~~G~i~-~~~~~~~~~~~-----------------------~~~~~~~~~-------------------~-~ 242 (500)
T TIGR02633 207 VCDTICVIRDGQHV-ATKDMSTMSED-----------------------DIITMMVGR-------------------E-I 242 (500)
T ss_pred hCCEEEEEeCCeEe-eecCcccCCHH-----------------------HHHHHHhCc-------------------c-c
Confidence 99999999999874 33332211000 000000000 0 0
Q ss_pred cccccccceEEeccC-CCCCCCcEEEEEeeeeee---CCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-
Q 006442 402 EKPFQRKQMKIRFPE-RGRSGRSVVTIKNLEFGY---EDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP- 476 (645)
Q Consensus 402 ~~~~~~~~~~~~~p~-~~~~~~~~i~~~~v~~~y---~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p- 476 (645)
... .|. ....++.+|+++|+++.| +++.+|+++||+|++||+++|+||||||||||+++|+|+++|
T Consensus 243 ~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~ 313 (500)
T TIGR02633 243 TSL---------YPHEPHEIGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGK 313 (500)
T ss_pred ccc---------ccccccCCCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCC
Confidence 000 000 011235689999999999 345799999999999999999999999999999999999985
Q ss_pred CeeEEEECceecc-----------cchhccchh-hcCCCCCCHHHHHHhhhc----c---c----cHHHHHHHHhhcCCC
Q 006442 477 RGGEVLLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAAE----D---W----RIDDIKGLLGRCNFK 533 (645)
Q Consensus 477 ~~G~i~~~g~~~~-----------~~~~~q~~~-~~l~~~~tv~e~v~~~~~----~---~----~~~~~~~~L~~~~l~ 533 (645)
++|+|.++|.++. .+|++|... ..+.+..|+.+|+..... . . ...++.++|+++++.
T Consensus 314 ~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 393 (500)
T TIGR02633 314 FEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVK 393 (500)
T ss_pred CCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCcc
Confidence 8999999997652 245555532 246677899999875310 0 0 123577899999995
Q ss_pred hhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEE
Q 006442 534 ADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRV 610 (645)
Q Consensus 534 ~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v 610 (645)
....++++..|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|.++ +.|||+||||++++.++|||+
T Consensus 394 ~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v 473 (500)
T TIGR02633 394 TASPFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRV 473 (500)
T ss_pred CCCccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEE
Confidence 34578999999999999999999999999999999999999999999999888754 569999999999999999999
Q ss_pred EEEeCCeEEee
Q 006442 611 VEVKGSNLQDY 621 (645)
Q Consensus 611 ~~l~~g~i~~~ 621 (645)
++|++|++...
T Consensus 474 ~~l~~G~i~~~ 484 (500)
T TIGR02633 474 LVIGEGKLKGD 484 (500)
T ss_pred EEEECCEEEEE
Confidence 99999998753
No 18
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-80 Score=692.03 Aligned_cols=441 Identities=22% Similarity=0.338 Sum_probs=347.4
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEE
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~ 164 (645)
++|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+
T Consensus 3 ~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i~ 82 (501)
T PRK11288 3 PYLSFDGIGKTFPGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGVA 82 (501)
T ss_pred ceEEEeeeEEEECCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCEE
Confidence 36999999999998889999999999999999999999999999999999999999999987632 2599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
|++|++.+++..||.+|+........ . ...+.+...+++.++++
T Consensus 83 ~v~q~~~~~~~~tv~~~l~~~~~~~~------------~------------------------~~~~~~~~~~~~~~~l~ 126 (501)
T PRK11288 83 IIYQELHLVPEMTVAENLYLGQLPHK------------G------------------------GIVNRRLLNYEAREQLE 126 (501)
T ss_pred EEEechhccCCCCHHHHHHhcccccc------------c------------------------CCCCHHHHHHHHHHHHH
Confidence 99999988888999999863210000 0 00011223445677888
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHh
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~ 321 (645)
.+|+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|+ +.|+|||+||||++++..
T Consensus 127 ~~~l~-~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~ 205 (501)
T PRK11288 127 HLGVD-IDPDTPLKYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFA 205 (501)
T ss_pred HcCCC-CCcCCchhhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence 99996 56788899999999999999999999999999999999999999999998875 358999999999999999
Q ss_pred hcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHhhhh
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQI 401 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~~ 401 (645)
+||+|+++++|++.. .+ +.+..... . .....+.... .
T Consensus 206 ~~d~i~~l~~G~i~~-~~--~~~~~~~~--------------~------~~~~~~~~~~--------------------~ 242 (501)
T PRK11288 206 LCDAITVFKDGRYVA-TF--DDMAQVDR--------------D------QLVQAMVGRE--------------------I 242 (501)
T ss_pred hCCEEEEEECCEEEe-ec--CccccCCH--------------H------HHHHHhcCCC--------------------c
Confidence 999999999998742 22 11100000 0 0000000000 0
Q ss_pred cccccccceEEeccCCCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEE
Q 006442 402 EKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV 481 (645)
Q Consensus 402 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i 481 (645)
... ...+ +...++..++++|+++. .+++++||+|++||+++|+||||||||||+++|+|+++|++|+|
T Consensus 243 ~~~-------~~~~-~~~~~~~~l~~~~~~~~----~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i 310 (501)
T PRK11288 243 GDI-------YGYR-PRPLGEVRLRLDGLKGP----GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQV 310 (501)
T ss_pred ccc-------cccc-ccCCCCcEEEEeccccC----CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceE
Confidence 000 0000 01123457999999843 58999999999999999999999999999999999999999999
Q ss_pred EECceecc-----------cchhccchh-hcCCCCCCHHHHHHhhhcc------------ccHHHHHHHHhhcCCChhhh
Q 006442 482 LLGEHNVL-----------PNYFEQNQA-EALDLDKTVLETVAEAAED------------WRIDDIKGLLGRCNFKADML 537 (645)
Q Consensus 482 ~~~g~~~~-----------~~~~~q~~~-~~l~~~~tv~e~v~~~~~~------------~~~~~~~~~L~~~~l~~~~~ 537 (645)
.++|.++. .+|++|+.. ..+.+..|+.+|+...... ...+.+.++|+.+++..+..
T Consensus 311 ~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 390 (501)
T PRK11288 311 YLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSR 390 (501)
T ss_pred EECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCc
Confidence 99987653 235555432 2356778999998653210 11235778999999954567
Q ss_pred ccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEe
Q 006442 538 DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVK 614 (645)
Q Consensus 538 ~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~ 614 (645)
++++.+|||||||||+|||||+.+|+||||||||+|||+.+++.+.++|.++ +.|||+||||++++.++||++++|+
T Consensus 391 ~~~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~ 470 (501)
T PRK11288 391 EQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMR 470 (501)
T ss_pred cCccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999998654 6799999999999999999999999
Q ss_pred CCeEEeeCCChhHHH
Q 006442 615 GSNLQDYAGDYNQVQ 629 (645)
Q Consensus 615 ~g~i~~~~~~~~~~~ 629 (645)
+|+++. .+..+++.
T Consensus 471 ~g~i~~-~~~~~~~~ 484 (501)
T PRK11288 471 EGRIAG-ELAREQAT 484 (501)
T ss_pred CCEEEE-EEccccCC
Confidence 999875 45555544
No 19
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-79 Score=682.01 Aligned_cols=430 Identities=20% Similarity=0.325 Sum_probs=337.8
Q ss_pred EEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEEEEec
Q 006442 100 LENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFLSQ 168 (645)
Q Consensus 100 i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~~v~Q 168 (645)
++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 1 ~~nl~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q 80 (491)
T PRK10982 1 MSNISKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMVHQ 80 (491)
T ss_pred CCceEEEeCCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEEec
Confidence 3689999998889999999999999999999999999999999999999999999998742 25999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++..||.||+....... ... ..+.....+++.++++.+|+
T Consensus 81 ~~~~~~~~tv~~~l~~~~~~~--------------~~~----------------------~~~~~~~~~~~~~~l~~~~l 124 (491)
T PRK10982 81 ELNLVLQRSVMDNMWLGRYPT--------------KGM----------------------FVDQDKMYRDTKAIFDELDI 124 (491)
T ss_pred ccccccCCCHHHHhhcccccc--------------ccc----------------------ccCHHHHHHHHHHHHHHcCC
Confidence 998878899999985321000 000 00011123456677888898
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCe
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTK 325 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ 325 (645)
. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|+ +.|.|||++|||++++..+||+
T Consensus 125 ~-~~~~~~~~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~ 203 (491)
T PRK10982 125 D-IDPRAKVATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDE 203 (491)
T ss_pred C-CCccCchhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCE
Confidence 6 56788899999999999999999999999999999999999999999988774 3589999999999999999999
Q ss_pred EEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHhhhhcccc
Q 006442 326 IVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPF 405 (645)
Q Consensus 326 i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~~~~~~ 405 (645)
|+++++|++. ..|+..+.... .....+... . ....
T Consensus 204 i~~l~~G~i~-~~~~~~~~~~~-----------------------~~~~~~~~~-------------------~-~~~~- 238 (491)
T PRK10982 204 ITILRDGQWI-ATQPLAGLTMD-----------------------KIIAMMVGR-------------------S-LTQR- 238 (491)
T ss_pred EEEEECCEEE-eecChhhCCHH-----------------------HHHHHHhCC-------------------C-cccc-
Confidence 9999999874 33432221000 000000000 0 0000
Q ss_pred cccceEEeccC-CCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEEC
Q 006442 406 QRKQMKIRFPE-RGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLG 484 (645)
Q Consensus 406 ~~~~~~~~~p~-~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~ 484 (645)
+|. ...+++++|+++|+++.| +.+|+++||+|++||++||+|+||||||||+++|+|+.+|++|+|.++
T Consensus 239 --------~~~~~~~~~~~~i~~~~l~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~ 308 (491)
T PRK10982 239 --------FPDKENKPGEVILEVRNLTSLR--QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLH 308 (491)
T ss_pred --------cccccCCCCCcEEEEeCccccc--CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEEC
Confidence 000 011245689999999985 469999999999999999999999999999999999999999999999
Q ss_pred ceecc-----------cchhccchh-hcCCCCCCHHHH-----HHhhhcc---c----cHHHHHHHHhhcCCChhhhccC
Q 006442 485 EHNVL-----------PNYFEQNQA-EALDLDKTVLET-----VAEAAED---W----RIDDIKGLLGRCNFKADMLDRK 540 (645)
Q Consensus 485 g~~~~-----------~~~~~q~~~-~~l~~~~tv~e~-----v~~~~~~---~----~~~~~~~~L~~~~l~~~~~~~~ 540 (645)
|.++. .+|++|... ..++.+.++.+| +...... . ....+..+++.+++..+..+++
T Consensus 309 g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 388 (491)
T PRK10982 309 GKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ 388 (491)
T ss_pred CEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccc
Confidence 97653 234555432 234456666655 3221110 1 1234678899999853457999
Q ss_pred cCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHh---cCceEEEEecCHHHHHhhCCEEEEEeCCe
Q 006442 541 VSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISE---YKGTVITVSHDRYFVKQIVNRVVEVKGSN 617 (645)
Q Consensus 541 ~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~---~~~tvi~vsHd~~~i~~~~d~v~~l~~g~ 617 (645)
+.+|||||||||+||||++.+|+||||||||+|||+.+++.+.+.|.+ .+.|||+||||++++..+|||+++|++|+
T Consensus 389 ~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~ 468 (491)
T PRK10982 389 IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGL 468 (491)
T ss_pred cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998854 46799999999999999999999999999
Q ss_pred EEee
Q 006442 618 LQDY 621 (645)
Q Consensus 618 i~~~ 621 (645)
++..
T Consensus 469 i~~~ 472 (491)
T PRK10982 469 VAGI 472 (491)
T ss_pred EEEE
Confidence 9853
No 20
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=8.2e-79 Score=680.86 Aligned_cols=435 Identities=22% Similarity=0.269 Sum_probs=333.9
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~v 166 (645)
+|+++|++|+|++.++|+|+||+|++|++++|+||||||||||+|+|+|+++|++|+|.+++.. ..++|+
T Consensus 3 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~~ 82 (490)
T PRK10938 3 SLQISQGTFRLSDTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSDE 82 (490)
T ss_pred eEEEEeEEEEcCCeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhcee
Confidence 5999999999988889999999999999999999999999999999999999999999986532 138999
Q ss_pred eccCccCC--------CCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 167 SQEFEVSM--------SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 167 ~Q~~~~~~--------~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
+|++.... ..|+.+++... ...+++
T Consensus 83 ~q~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~ 115 (490)
T PRK10938 83 WQRNNTDMLSPGEDDTGRTTAEIIQDE-----------------------------------------------VKDPAR 115 (490)
T ss_pred ccCcchhhcccchhhccccHHHhcccc-----------------------------------------------hhHHHH
Confidence 99864311 23444443200 011344
Q ss_pred HHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecC
Q 006442 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHD 315 (645)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd 315 (645)
+.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .|+|||+||||
T Consensus 116 ~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~ 194 (490)
T PRK10938 116 CEQLAQQFGIT-ALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNR 194 (490)
T ss_pred HHHHHHHcCCH-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 56778888986 567899999999999999999999999999999999999999999999988743 48899999999
Q ss_pred HHHHHhhcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHH
Q 006442 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERL 395 (645)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl 395 (645)
++++.++||+++++++|++. +.|+.+++.... .+.++... +++
T Consensus 195 ~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~~~~-----------------------~~~~~~~~-------------~~~ 237 (490)
T PRK10938 195 FDEIPDFVQFAGVLADCTLA-ETGEREEILQQA-----------------------LVAQLAHS-------------EQL 237 (490)
T ss_pred HHHHHhhCCEEEEEECCEEE-EeCCHHHHhcch-----------------------hhhhhhhh-------------hcc
Confidence 99999999999999999984 446544332110 00000000 000
Q ss_pred HHhhhhcccccccceEEeccCCCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC
Q 006442 396 QEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK 475 (645)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~ 475 (645)
.. ...+..... ..+.......++|+++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+.+
T Consensus 238 ~~---~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~ 311 (490)
T PRK10938 238 EG---VQLPEPDEP---SARHALPANEPRIVLNNGVVSYNDRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHP 311 (490)
T ss_pred Cc---cccCccccc---ccccccCCCCceEEEeceEEEECCeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC
Confidence 00 000000000 000001124568999999999988889999999999999999999999999999999999887
Q ss_pred C-CeeEEEECceecc-----------cchhccchhhcCCCCCCHHHHHHhhhc-------cc---cHHHHHHHHhhcCCC
Q 006442 476 P-RGGEVLLGEHNVL-----------PNYFEQNQAEALDLDKTVLETVAEAAE-------DW---RIDDIKGLLGRCNFK 533 (645)
Q Consensus 476 p-~~G~i~~~g~~~~-----------~~~~~q~~~~~l~~~~tv~e~v~~~~~-------~~---~~~~~~~~L~~~~l~ 533 (645)
| ++|+|+++|.++. .+|+.|+.........++.+++..... .. ....+.++++.+++.
T Consensus 312 ~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 391 (490)
T PRK10938 312 QGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGID 391 (490)
T ss_pred cccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCc
Confidence 6 6999999986431 234454422111123456665543210 01 123577899999996
Q ss_pred hhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---Cc-eEEEEecCHHHHHh-hCC
Q 006442 534 ADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KG-TVITVSHDRYFVKQ-IVN 608 (645)
Q Consensus 534 ~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~-tvi~vsHd~~~i~~-~~d 608 (645)
.+..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.+.|.++ ++ |||+||||++++.+ +||
T Consensus 392 ~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d 471 (490)
T PRK10938 392 KRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITH 471 (490)
T ss_pred hhhccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhhe
Confidence 33678999999999999999999999999999999999999999999999999865 33 69999999999987 599
Q ss_pred EEEEEeCCeEEeeC
Q 006442 609 RVVEVKGSNLQDYA 622 (645)
Q Consensus 609 ~v~~l~~g~i~~~~ 622 (645)
++++|++|+++.+.
T Consensus 472 ~v~~l~~G~i~~~~ 485 (490)
T PRK10938 472 RLEFVPDGDIYRYV 485 (490)
T ss_pred eEEEecCCceEEee
Confidence 99999999987654
No 21
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.4e-77 Score=629.00 Aligned_cols=496 Identities=30% Similarity=0.485 Sum_probs=402.8
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCccCC
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSM 174 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~ 174 (645)
...|.+.+++..||++.+|.+-++++..|.+|||||+||+|||||||+|+. |.|... -++|+..-..
T Consensus 78 ~~Di~~~~fdLa~G~k~LL~~a~L~L~~GrRYGLvGrNG~GKsTLLRaia~------~~v~~f-------~veqE~~g~~ 144 (582)
T KOG0062|consen 78 SKDIHIDNFDLAYGGKILLNKANLTLSRGRRYGLVGRNGIGKSTLLRAIAN------GQVSGF-------HVEQEVRGDD 144 (582)
T ss_pred ccceeeeeeeeeecchhhhcCCceeeecccccceeCCCCCcHHHHHHHHHh------cCcCcc-------Cchhheeccc
Confidence 446999999999999999999999999999999999999999999999997 444322 1223321000
Q ss_pred CCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChh-cHHHHHHhhchhcCCCcccc
Q 006442 175 SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLD-TLDAKVSKLMPELGFTADDG 253 (645)
Q Consensus 175 ~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ll~~lgl~~~~~ 253 (645)
..-..+.+. ..... .++ +.+- ..+... ..++...++|..+||+++..
T Consensus 145 t~~~~~~l~----~D~~~-----------------~df----l~~e-------~~l~~~~~l~ei~~~~L~glGFt~emq 192 (582)
T KOG0062|consen 145 TEALQSVLE----SDTER-----------------LDF----LAEE-------KELLAGLTLEEIYDKILAGLGFTPEMQ 192 (582)
T ss_pred hHHHhhhhh----ccHHH-----------------HHH----HHhh-------hhhhccchHHHHHHHHHHhCCCCHHHH
Confidence 000000000 00000 000 0000 001111 23333445899999999999
Q ss_pred cccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCce
Q 006442 254 DRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGV 333 (645)
Q Consensus 254 ~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~i~~l~~G~ 333 (645)
.+++.+||||||+|++|||||..+|||||||||||+||..++.||.++|+.++.|+|+||||..|++.+|+.|+..++-+
T Consensus 193 ~~pt~slSGGWrMrlaLARAlf~~pDlLLLDEPTNhLDv~av~WLe~yL~t~~~T~liVSHDr~FLn~V~tdIIH~~~~k 272 (582)
T KOG0062|consen 193 LQPTKSLSGGWRMRLALARALFAKPDLLLLDEPTNHLDVVAVAWLENYLQTWKITSLIVSHDRNFLNTVCTDIIHLENLK 272 (582)
T ss_pred hccccccCcchhhHHHHHHHHhcCCCEEeecCCcccchhHHHHHHHHHHhhCCceEEEEeccHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-chhhHHHHHHHHHHHHHhhhhcccccccceEE
Q 006442 334 SRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGA-NSGRASSAEKKLERLQEEEQIEKPFQRKQMKI 412 (645)
Q Consensus 334 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~ 412 (645)
+..|.|||++|+..+.+....+.+.|+.+.+..+..+..+++++..+ .+..++++.+.++++ ....++.......+
T Consensus 273 L~~YkGN~~~Fvk~k~E~~~n~qrefe~q~~~R~h~q~fid~FrYna~ra~svqSRIk~L~kl---~~lk~~~~~~~~~~ 349 (582)
T KOG0062|consen 273 LDYYKGNYSQFVKTKPEAKKNQQREFEVQMKYRAHLQVFIDKFRYNAARASSVQSRIKMLGKL---PALKSTLIEVLIGF 349 (582)
T ss_pred hhhhcCcHHHHHHhhHHhhhhhhhhcchHHHHHHHHHHHHHHhccCcccchhHHHHHHHhccC---CCCCccceecccce
Confidence 99999999999999999999999999988888888888888887532 223444444444433 22233333444566
Q ss_pred eccCC-CCCCCcEEEEEeeeeeeCCe--eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc
Q 006442 413 RFPER-GRSGRSVVTIKNLEFGYEDR--LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL 489 (645)
Q Consensus 413 ~~p~~-~~~~~~~i~~~~v~~~y~~~--~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~ 489 (645)
.||++ ...+.+.+++.+|+|.|... .++.++++.++.-++++++|+||+||||+++++.+.+.|..|.+.+.+ .++
T Consensus 350 ~fP~~~e~~~~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-r~r 428 (582)
T KOG0062|consen 350 LFPTEGEVLSPPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-RLR 428 (582)
T ss_pred ecCCCCCcCCCCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-cce
Confidence 77874 34578899999999999754 489999999999999999999999999999999999999999998875 357
Q ss_pred cchhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeC
Q 006442 490 PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (645)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 569 (645)
.+||.|+.-..+....+..+.++...+-...++++..|+.||+..++..+++..||||||-||++|.+.+.+|++|||||
T Consensus 429 i~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~si~~LSGGQKsrvafA~~~~~~PhlLVLDE 508 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQSIASLSGGQKSRVAFAACTWNNPHLLVLDE 508 (582)
T ss_pred ecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhccccccCCcchhHHHHHHHhcCCCcEEEecC
Confidence 78999987666655666677766655555778999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHHHhhhhhhh
Q 006442 570 PTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSLWFLTIEVS 639 (645)
Q Consensus 570 Pt~~LD~~s~~~l~~~l~~~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~~~~~~~~~ 639 (645)
|||+||.++...|.++|+.|.+.||+||||.+|+..+|+.+|++++|++..+.|..++|.+.-...+..+
T Consensus 509 PTNhLD~dsl~AL~~Al~~F~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ieg~~~~yKkl~~~e~~~~ 578 (582)
T KOG0062|consen 509 PTNHLDRDSLGALAKALKNFNGGVVLVSHDEEFISSLCKELWVVEDGKVTPIEGGIDKYKKLLGAELRAK 578 (582)
T ss_pred CCccccHHHHHHHHHHHHhcCCcEEEEECcHHHHhhcCceeEEEcCCcEEeeeccHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999887766555443
No 22
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.5e-76 Score=678.29 Aligned_cols=539 Identities=25% Similarity=0.403 Sum_probs=368.7
Q ss_pred cchhhhhHHHHhhhhhhHhhhccCchhhhcccccccCCCCCCCCCCccEEEEeEEEEeCCee---eeeeeeEEEECCcEE
Q 006442 50 SAATVEKKSIAKAQSDVESLFSSSADEFENKKYSNKQSNTGASSISSGVKLENISKSYKGVT---VLKDVTWEVKKGEKV 126 (645)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~nls~~y~~~~---vL~~vsl~i~~Ge~~ 126 (645)
....+...++..++.++..+++..++.+..+.....+. ........|+++||+|+|+.++ +|+++||.|++|+.+
T Consensus 305 gqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~--~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~v 382 (1228)
T KOG0055|consen 305 GQASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGR--VLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTV 382 (1228)
T ss_pred hccccchHHHhccccchHHHHHHhcCCCCCCcccccCC--cccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEE
Confidence 34455567788888888888877665544444331111 2223455799999999998764 999999999999999
Q ss_pred EEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCc----------eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHH
Q 006442 127 GLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKL 196 (645)
Q Consensus 127 ~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~----------~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~ 196 (645)
+|||||||||||++++|.++++|++|+|.++|.+. +||.|+|+|.+ ++.||+|||..+-.+. . .
T Consensus 383 alVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvl-F~~tI~eNI~~G~~da-t----~ 456 (1228)
T KOG0055|consen 383 ALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVL-FATTIRENIRYGKPDA-T----R 456 (1228)
T ss_pred EEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhh-hcccHHHHHhcCCCcc-c----H
Confidence 99999999999999999999999999999998754 59999999954 8999999997543210 0 0
Q ss_pred HHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHcc
Q 006442 197 ERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQ 276 (645)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~ 276 (645)
+++.++.+.. ...+++..+.+ |+.+..+++ ..+|||||||||||||||+.
T Consensus 457 ~~i~~a~k~a-na~~fi~~lp~----------------------------g~~T~vge~-g~qLSGGQKQRIAIARalv~ 506 (1228)
T KOG0055|consen 457 EEIEEAAKAA-NAHDFILKLPD----------------------------GYDTLVGER-GVQLSGGQKQRIAIARALVR 506 (1228)
T ss_pred HHHHHHHHHc-cHHHHHHhhHH----------------------------hhcccccCC-CCCCChHHHHHHHHHHHHHh
Confidence 1111111111 11222222221 222223333 45699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcCeEEEEcCceeEEe---------ccChHHHH
Q 006442 277 DPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTY---------EGNYSQYV 345 (645)
Q Consensus 277 ~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~---------~g~~~~~~ 345 (645)
+|+|||||||||+||+++.+.+.+.|.+ .|+|.|+|+|++..+.. +|+|+++++|++... .|-|.+.+
T Consensus 507 ~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrn-aD~I~v~~~G~IvE~G~h~ELi~~~G~Y~~lv 585 (1228)
T KOG0055|consen 507 NPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRN-ADKIAVMEEGKIVEQGTHDELIALGGIYSSLV 585 (1228)
T ss_pred CCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhc-cCEEEEEECCEEEEecCHHHHHhccchHHHHH
Confidence 9999999999999999999999999854 68999999999999998 999999999986321 13332211
Q ss_pred HHHHH-H-----------H-----H-------------------------------H---------H-------------
Q 006442 346 LEKAA-W-----------I-----E-------------------------------S---------Q------------- 355 (645)
Q Consensus 346 ~~~~~-~-----------~-----~-------------------------------~---------~------------- 355 (645)
..... . . . . .
T Consensus 586 ~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~s~~~i~k~~~pe~~~ 665 (1228)
T KOG0055|consen 586 RLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLSVKPEGEDPEEPVSEEDEKVSFWRIFKLNKPEWPY 665 (1228)
T ss_pred HHHhhhhhhhccccccchhhhhhhccccccccccccCCccccccccccccccccccccccccccccHHHHHHhccchhHH
Confidence 10000 0 0 0 0 0
Q ss_pred -------------------------HHHHH-----HHHHH---H--------------------------HHHHH-----
Q 006442 356 -------------------------YAAWE-----KQQRE---I--------------------------EQTKD----- 371 (645)
Q Consensus 356 -------------------------~~~~~-----~~~~~---~--------------------------~~~~~----- 371 (645)
+..|. ...+. + +++..
T Consensus 666 l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~ 745 (1228)
T KOG0055|consen 666 LLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSM 745 (1228)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 00000 0 00000
Q ss_pred ---------------------HHHHhccCCchhh----------------------------------------------
Q 006442 372 ---------------------LINRLGAGANSGR---------------------------------------------- 384 (645)
Q Consensus 372 ---------------------~~~~l~~~~~~~~---------------------------------------------- 384 (645)
+..|+..+++.-+
T Consensus 746 ~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~ 825 (1228)
T KOG0055|consen 746 MFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSG 825 (1228)
T ss_pred HHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000
Q ss_pred -------------HHH--------------HHHHH------HHHH-Hh--------------------------------
Q 006442 385 -------------ASS--------------AEKKL------ERLQ-EE-------------------------------- 398 (645)
Q Consensus 385 -------------~~~--------------~~~~l------~rl~-~~-------------------------------- 398 (645)
... ..+++ ++.. .+
T Consensus 826 ~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~ 905 (1228)
T KOG0055|consen 826 YLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFV 905 (1228)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00000 0000 00
Q ss_pred -----------------------------------------------------hhhcccccccceEEeccC-CC---CCC
Q 006442 399 -----------------------------------------------------EQIEKPFQRKQMKIRFPE-RG---RSG 421 (645)
Q Consensus 399 -----------------------------------------------------~~~~~~~~~~~~~~~~p~-~~---~~~ 421 (645)
..+-...++++ +++.+. .+ ..-
T Consensus 906 ~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~-~i~~~~~~~~~~~~~ 984 (1228)
T KOG0055|consen 906 YALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKP-TIDPDSTSGGKLPNV 984 (1228)
T ss_pred HHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCC-CCCCCCCCCCccccc
Confidence 00000000000 111010 11 112
Q ss_pred CcEEEEEeeeeeeCCe---eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceeccc---chhcc
Q 006442 422 RSVVTIKNLEFGYEDR---LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP---NYFEQ 495 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~---~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~---~~~~q 495 (645)
++-|+++||+|.||.+ ++|+|+||+|++|+.+|||||+||||||.+.+|.+++.|++|.|.+||.+++. .++++
T Consensus 985 ~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~ 1064 (1228)
T KOG0055|consen 985 KGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRK 1064 (1228)
T ss_pred eeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHH
Confidence 3459999999999865 58999999999999999999999999999999999999999999999998742 22222
Q ss_pred c----hhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCC------hhhhcc----CcCcCCHhHHHHHHHHHHHccC
Q 006442 496 N----QAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFK------ADMLDR----KVSLLSGGEKARLAFCKFMVKP 561 (645)
Q Consensus 496 ~----~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~------~~~~~~----~~~~LSgGqkqrv~lAral~~~ 561 (645)
+ .+++..++.|++||+.++......+++.++++..+.. ++-.|+ +..+||||||||+|||||++++
T Consensus 1065 ~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRn 1144 (1228)
T KOG0055|consen 1065 QIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRN 1144 (1228)
T ss_pred hcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcC
Confidence 2 1223447899999999994445667777776665442 111233 3459999999999999999999
Q ss_pred CCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 562 STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 562 p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|+||||||+||+||.++.+.++++|.+. +.|+|+|+|++.++.+ ||.|+|+++|++++ .|+.+++++
T Consensus 1145 PkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqn-aD~I~Vi~~G~VvE-~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1145 PKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQN-ADVIAVLKNGKVVE-QGTHDELLA 1213 (1228)
T ss_pred CCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhc-CCEEEEEECCEEEe-cccHHHHHh
Confidence 9999999999999999999999999976 5699999999999987 99999999999996 688888876
No 23
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.3e-75 Score=683.59 Aligned_cols=547 Identities=24% Similarity=0.394 Sum_probs=402.3
Q ss_pred cccccccccccccccccCCC--cccccccchhhhhHHHHhhhhhhHhhhccCchhhhcccccccCCCCCCCCCCccEEEE
Q 006442 24 PFASAKSFTNSLNFTKKQRP--RITCQVSAATVEKKSIAKAQSDVESLFSSSADEFENKKYSNKQSNTGASSISSGVKLE 101 (645)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 101 (645)
.+++...|.....|+.+++| .+|..++..++..+|+.+ +.+++..++........ .........++++
T Consensus 453 ~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~R----i~~fl~~~e~~~~~~~~------~~~~~~~~~i~i~ 522 (1381)
T KOG0054|consen 453 LLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKR----LKEFLLSEELDPDSVER------SPDEAGENAIEIK 522 (1381)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhcCcccCcccccc------CCCCCCCceEEEe
Confidence 45566788888888888888 688899999999999999 77777665432211110 1112234569999
Q ss_pred eEEEEeCC---eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCccCCCCCH
Q 006442 102 NISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTV 178 (645)
Q Consensus 102 nls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~~Tv 178 (645)
|.+|+|+. .+.|+||||+|++|+.+||||+.|||||+||.+|+|+++..+|+|.++| .++||||.||+ ++.||
T Consensus 523 ~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~g---siaYv~Q~pWI-~ngTv 598 (1381)
T KOG0054|consen 523 NGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNG---SVAYVPQQPWI-QNGTV 598 (1381)
T ss_pred eeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcC---eEEEeccccHh-hCCcH
Confidence 99999965 3499999999999999999999999999999999999999999999875 59999999998 78999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcccccccCC
Q 006442 179 REEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVA 258 (645)
Q Consensus 179 ~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~ 258 (645)
+|||.. +..++. + +|..++.+|.++++++-+ . .|..++.++| ..
T Consensus 599 reNILF--G~~~d~----~---------------------------rY~~Vi~aC~L~~Dle~L-p-~GD~TeIGEr-Gi 642 (1381)
T KOG0054|consen 599 RENILF--GSPYDE----E---------------------------RYDKVIKACALKKDLEIL-P-FGDLTEIGER-GI 642 (1381)
T ss_pred HHhhhc--CccccH----H---------------------------HHHHHHHHccCHhHHhhc-C-CCCcceecCC-cc
Confidence 999974 332221 2 334445555555555433 2 2444566666 79
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHH-Hcc--CCCeEEEEecCHHHHHhhcCeEEEEcCceeE
Q 006442 259 SFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGY-LGK--QDVPMVIISHDRAFLDQLCTKIVETEMGVSR 335 (645)
Q Consensus 259 ~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~-L~~--~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~ 335 (645)
+|||||||||+||||+|+++||+|||+|+|++|+++.+++.+. ++. .++|+|+|||.++++.+ ||.|++|++|++
T Consensus 643 nLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~-ad~Iivl~~G~I- 720 (1381)
T KOG0054|consen 643 NLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPH-ADQIIVLKDGKI- 720 (1381)
T ss_pred CCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhh-CCEEEEecCCeE-
Confidence 9999999999999999999999999999999999999888764 322 37999999999999986 899999999997
Q ss_pred EeccChHHHHHHHHH-----------------------------------------------------HH-HH-------
Q 006442 336 TYEGNYSQYVLEKAA-----------------------------------------------------WI-ES------- 354 (645)
Q Consensus 336 ~~~g~~~~~~~~~~~-----------------------------------------------------~~-~~------- 354 (645)
...|+|++....... .. ..
T Consensus 721 ~~~Gty~el~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~ 800 (1381)
T KOG0054|consen 721 VESGTYEELLKSGGDFAELAHEEESEQEEEASEKDLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGK 800 (1381)
T ss_pred ecccCHHHHHhcchhHHHHhhccchhhccccccccccccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCE
Confidence 455666543310000 00 00
Q ss_pred ----HH--------------------------------------------------------------------------
Q 006442 355 ----QY-------------------------------------------------------------------------- 356 (645)
Q Consensus 355 ----~~-------------------------------------------------------------------------- 356 (645)
.|
T Consensus 801 v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~ 880 (1381)
T KOG0054|consen 801 VSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSF 880 (1381)
T ss_pred eeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 00
Q ss_pred --------------------------------------------------------------------------------
Q 006442 357 -------------------------------------------------------------------------------- 356 (645)
Q Consensus 357 -------------------------------------------------------------------------------- 356 (645)
T Consensus 881 ~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~f 960 (1381)
T KOG0054|consen 881 LFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWF 960 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHH
Confidence
Q ss_pred --------------------------------------------------HHHHHHHHHHHHHHHHHHH-----------
Q 006442 357 --------------------------------------------------AAWEKQQREIEQTKDLINR----------- 375 (645)
Q Consensus 357 --------------------------------------------------~~~~~~~~~~~~~~~~~~~----------- 375 (645)
|+|+++..-++++..+++.
T Consensus 961 li~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a 1040 (1381)
T KOG0054|consen 961 LIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISA 1040 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 0011111000000000000
Q ss_pred ----------h---------------ccC-CchhhHHH------------------------HHHHHHHHHHhhhhcccc
Q 006442 376 ----------L---------------GAG-ANSGRASS------------------------AEKKLERLQEEEQIEKPF 405 (645)
Q Consensus 376 ----------l---------------~~~-~~~~~~~~------------------------~~~~l~rl~~~~~~~~~~ 405 (645)
+ ... .++|.++- ....+||+.++...+.+
T Consensus 1041 ~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E- 1119 (1381)
T KOG0054|consen 1041 NRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSE- 1119 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCC-
Confidence 0 000 11111110 00112556555543222
Q ss_pred cccceEEeccCCCCCCCcEEEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEE
Q 006442 406 QRKQMKIRFPERGRSGRSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLL 483 (645)
Q Consensus 406 ~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~ 483 (645)
.+....-..|++.||.++.|+++|++.+|.+ .++|+|+||+|++||+|||||++|||||||+.+|+++.+|.+|+|.|
T Consensus 1120 ~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~I 1199 (1381)
T KOG0054|consen 1120 APLEIEESRPPPSWPSKGEIEFEDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILI 1199 (1381)
T ss_pred CCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEE
Confidence 1111111117788999999999999999965 47999999999999999999999999999999999999999999999
Q ss_pred Cceeccc----------chhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhh------hcc----CcCc
Q 006442 484 GEHNVLP----------NYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADM------LDR----KVSL 543 (645)
Q Consensus 484 ~g~~~~~----------~~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~------~~~----~~~~ 543 (645)
||.|+.. ..++|. ...++-|++.|+-- ...+++++++++|+++++.... +|. ...+
T Consensus 1200 DgvdI~~igL~dLRsrlsIIPQd---PvLFsGTvR~NLDP-f~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N 1275 (1381)
T KOG0054|consen 1200 DGVDISKIGLHDLRSRLSIIPQD---PVLFSGTVRFNLDP-FDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGEN 1275 (1381)
T ss_pred cCeecccccHHHHHhcCeeeCCC---CceecCccccccCc-ccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCcc
Confidence 9998732 233443 34467888888743 3457788899999999885322 122 2358
Q ss_pred CCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHh-cC-ceEEEEecCHHHHHhhCCEEEEEeCCeEEee
Q 006442 544 LSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISE-YK-GTVITVSHDRYFVKQIVNRVVEVKGSNLQDY 621 (645)
Q Consensus 544 LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~-~~-~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~ 621 (645)
+|-||||.|||||||+++++||+|||+|+++|+++...+++.|++ |+ .|||.|+|++++|.+ ||||+||++|+++++
T Consensus 1276 ~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd-~DrVlVld~G~v~Ef 1354 (1381)
T KOG0054|consen 1276 FSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMD-SDRVLVLDAGRVVEF 1354 (1381)
T ss_pred CChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhh-cCeEEEeeCCeEeec
Confidence 999999999999999999999999999999999999999999995 54 599999999999999 999999999999987
Q ss_pred CCChhHHH
Q 006442 622 AGDYNQVQ 629 (645)
Q Consensus 622 ~~~~~~~~ 629 (645)
+. +..++
T Consensus 1355 ds-P~~Ll 1361 (1381)
T KOG0054|consen 1355 DS-PAELL 1361 (1381)
T ss_pred CC-hHHHH
Confidence 54 44454
No 24
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.7e-73 Score=583.62 Aligned_cols=448 Identities=21% Similarity=0.336 Sum_probs=360.3
Q ss_pred CccEEEEeEEEEeC----CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC-----
Q 006442 95 SSGVKLENISKSYK----GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~----~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~----- 160 (645)
.+.++++|++..|. ...++++|||+|++||.+||||.+|||||-..+.|+|+++. -+|+|.++|.+
T Consensus 4 ~~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~s 83 (534)
T COG4172 4 MPLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAAS 83 (534)
T ss_pred CcceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCC
Confidence 45799999999995 45699999999999999999999999999999999999875 37899998753
Q ss_pred ---------ceEEEEeccCcc--CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHh
Q 006442 161 ---------MKIAFLSQEFEV--SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQA 229 (645)
Q Consensus 161 ---------~~i~~v~Q~~~~--~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (645)
.+|+++||+|-. .+-.||...+...+ +....
T Consensus 84 e~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l--------------------------------------~~Hrg 125 (534)
T COG4172 84 ERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVL--------------------------------------RLHRG 125 (534)
T ss_pred HHHHhhhcccceEEEecccccccCcHhHHHHHHHHHH--------------------------------------HHHhc
Confidence 279999999943 23335544332111 12223
Q ss_pred CChhcHHHHHHhhchhcCCCcc--cccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----
Q 006442 230 VNLDTLDAKVSKLMPELGFTAD--DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---- 303 (645)
Q Consensus 230 ~~~~~~~~~i~~ll~~lgl~~~--~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---- 303 (645)
+...+.++++.++|+.+|++.+ ..+.++++|||||||||.||.||+.+|++||.||||.+||.....++.++|+
T Consensus 126 ~~~~~Ar~r~lelL~~VgI~~p~~rl~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~ 205 (534)
T COG4172 126 LSRAAARARALELLELVGIPEPEKRLDAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQA 205 (534)
T ss_pred ccHHHHHHHHHHHHHHcCCCchhhhhhhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHH
Confidence 4555677889999999999643 5778899999999999999999999999999999999999999999988875
Q ss_pred cCCCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh
Q 006442 304 KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSG 383 (645)
Q Consensus 304 ~~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 383 (645)
+.|.++++||||+..+.+++|||++|..|.+. -.|...+.+... ...| ++.+++.
T Consensus 206 ~~gMa~lfITHDL~iVr~~ADrV~VM~~G~iv-E~~~t~~lF~~P-------qHpY---------Tr~Ll~a-------- 260 (534)
T COG4172 206 ELGMAILFITHDLGIVRKFADRVYVMQHGEIV-ETGTTETLFAAP-------QHPY---------TRKLLAA-------- 260 (534)
T ss_pred HhCcEEEEEeccHHHHHHhhhhEEEEeccEEe-ecCcHHHHhhCC-------CChH---------HHHHHhc--------
Confidence 47999999999999999999999999999974 233322211110 0011 1111110
Q ss_pred hHHHHHHHHHHHHHhhhhcccccccceEEeccCCCCCCCcEEEEEeeeeeeCC-----------eeceeeeeEEEecCcE
Q 006442 384 RASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED-----------RLLFNRANLTIERGEK 452 (645)
Q Consensus 384 ~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~-----------~~~l~~vsl~i~~Ge~ 452 (645)
.|...+ ++......++++.+++.+.|+- ..+++++||++++||.
T Consensus 261 -------------------eP~g~~------~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqT 315 (534)
T COG4172 261 -------------------EPSGDP------PPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQT 315 (534)
T ss_pred -------------------CCCCCC------CCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCe
Confidence 111110 2223346778999999999852 2478999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceeccc-------------chhccchhhcCCCCCCHHHHHHhhhc---
Q 006442 453 TAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP-------------NYFEQNQAEALDLDKTVLETVAEAAE--- 516 (645)
Q Consensus 453 v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~-------------~~~~q~~~~~l~~~~tv~e~v~~~~~--- 516 (645)
+||||++|||||||-.+|.+++++. |+|.++|.++.. ..++|++...+.+.+||.+.|.++..
T Consensus 316 lGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~ 394 (534)
T COG4172 316 LGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHE 394 (534)
T ss_pred EEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcC
Confidence 9999999999999999999999887 999999987631 23456666678899999999987642
Q ss_pred -----cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--
Q 006442 517 -----DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY-- 589 (645)
Q Consensus 517 -----~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~-- 589 (645)
....+++.++|..+|+.....+++|+++|||||||++|||||+.+|++++||||||+||..-+..+.++|+..
T Consensus 395 ~~ls~~eR~~rv~~aL~EVGLDp~~r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~ 474 (534)
T COG4172 395 PKLSAAERDQRVIEALEEVGLDPATRNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQ 474 (534)
T ss_pred CCCCHHHHHHHHHHHHHHcCCChhHhhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHH
Confidence 1234568899999999988999999999999999999999999999999999999999999999999988754
Q ss_pred --CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHHH
Q 006442 590 --KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSLW 632 (645)
Q Consensus 590 --~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~~ 632 (645)
+-+-++||||+..+..+||+|+||.+|+|++ .|+.++.++..
T Consensus 475 k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE-~G~~~~if~~P 518 (534)
T COG4172 475 KHGLSYLFISHDLAVVRALCHRVIVMRDGKIVE-QGPTEAVFANP 518 (534)
T ss_pred HhCCeEEEEeccHHHHHHhhceEEEEeCCEEee-eCCHHHHhcCC
Confidence 4599999999999999999999999999997 57766665443
No 25
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=4.2e-73 Score=641.78 Aligned_cols=420 Identities=26% Similarity=0.379 Sum_probs=321.1
Q ss_pred eEEEEeCCe-eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEE-----------EcCCC---------
Q 006442 102 NISKSYKGV-TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVI-----------KAKSN--------- 160 (645)
Q Consensus 102 nls~~y~~~-~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~-----------~~~~~--------- 160 (645)
+++++|+.+ .+|++++ .+++|+++||+||||||||||+++|+|+++|++|+|. +.|..
T Consensus 78 ~~~~~yg~~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~~~ 156 (590)
T PRK13409 78 EPVHRYGVNGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKKLY 156 (590)
T ss_pred CceEEecCCceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHHHh
Confidence 489999875 5999999 9999999999999999999999999999999999997 54421
Q ss_pred ---ceEEEEeccCccCC---CCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhc
Q 006442 161 ---MKIAFLSQEFEVSM---SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDT 234 (645)
Q Consensus 161 ---~~i~~v~Q~~~~~~---~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (645)
.++++.+|.....+ ..||.|++... .
T Consensus 157 ~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~------------------------------------------------~ 188 (590)
T PRK13409 157 NGEIKVVHKPQYVDLIPKVFKGKVRELLKKV------------------------------------------------D 188 (590)
T ss_pred ccCcceeecccchhhhhhhhcchHHHHHHhh------------------------------------------------h
Confidence 23555555433222 23666654210 0
Q ss_pred HHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccC--CCeEEEE
Q 006442 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQ--DVPMVII 312 (645)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~--g~tvIiv 312 (645)
...++.++++.+|+. ...++++.+|||||||||+||+||+.+|++|||||||++||+.++.++.++|++. |+|||+|
T Consensus 189 ~~~~~~~~l~~l~l~-~~~~~~~~~LSgGe~qrv~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIiv 267 (590)
T PRK13409 189 ERGKLDEVVERLGLE-NILDRDISELSGGELQRVAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVV 267 (590)
T ss_pred HHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEE
Confidence 123456677888885 5679999999999999999999999999999999999999999999999887543 8999999
Q ss_pred ecCHHHHHhhcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHH
Q 006442 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKL 392 (645)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 392 (645)
|||++++..+||+|+++.++. |.|..+....... ..++ ..+..+.. .
T Consensus 268 sHd~~~l~~~~D~v~vl~~~~-----g~~g~~~~~~~~~------------~~i~---~~~~~~~~---------~---- 314 (590)
T PRK13409 268 EHDLAVLDYLADNVHIAYGEP-----GAYGVVSKPKGVR------------VGIN---EYLKGYLP---------E---- 314 (590)
T ss_pred eCCHHHHHHhCCEEEEEeCCc-----cccceecchhHHH------------HhHH---HHHHhcch---------h----
Confidence 999999999999999997642 1111111000000 0000 00000000 0
Q ss_pred HHHHHhhhhcccccccceEEeccCC--CCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHH
Q 006442 393 ERLQEEEQIEKPFQRKQMKIRFPER--GRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLI 470 (645)
Q Consensus 393 ~rl~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l 470 (645)
++.+ .. + ....+.++++ ...+.++++++|+++.|++. .|+++||+|++||+++|+||||||||||+++|
T Consensus 315 e~~~----~~-~---~~~~~~~~~~~~~~~~~~~l~~~~ls~~~~~~-~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L 385 (590)
T PRK13409 315 ENMR----IR-P---EPIEFEERPPRDESERETLVEYPDLTKKLGDF-SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLL 385 (590)
T ss_pred hhhh----cc-c---cCcceecCCCccccCCceEEEEcceEEEECCE-EEEecceEECCCCEEEEECCCCCCHHHHHHHH
Confidence 0000 00 0 0001111111 11356789999999999865 49999999999999999999999999999999
Q ss_pred HcCCCCCeeEEEECceecccchhccchhhcCCCCCCHHHHHHhhhccc-cHHHHHHHHhhcCCChhhhccCcCcCCHhHH
Q 006442 471 MGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDW-RIDDIKGLLGRCNFKADMLDRKVSLLSGGEK 549 (645)
Q Consensus 471 ~g~~~p~~G~i~~~g~~~~~~~~~q~~~~~l~~~~tv~e~v~~~~~~~-~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqk 549 (645)
+|+++|++|+|.++ +..+|++|+. .+.+..||.+++....... ....+.++|+.+++. +..++++.+||||||
T Consensus 386 ~Gl~~p~~G~I~~~---~~i~y~~Q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~-~~~~~~~~~LSGGe~ 459 (590)
T PRK13409 386 AGVLKPDEGEVDPE---LKISYKPQYI--KPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLE-RLLDKNVKDLSGGEL 459 (590)
T ss_pred hCCCCCCceEEEEe---eeEEEecccc--cCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCH-HHHhCCcccCCHHHH
Confidence 99999999999986 3567777764 3457889999997643222 223467899999995 678999999999999
Q ss_pred HHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 550 ARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 550 qrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
|||+|||||+++|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|||+++|++ ++..
T Consensus 460 QRvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~ 533 (590)
T PRK13409 460 QRVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGK 533 (590)
T ss_pred HHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-ccee
Confidence 9999999999999999999999999999999999999875 56999999999999999999999975 5543
No 26
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.8e-73 Score=582.02 Aligned_cols=517 Identities=31% Similarity=0.540 Sum_probs=413.6
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCccCC
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSM 174 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~ 174 (645)
...|.|+|.+.+-.++.++.+.||.|-.|.++|||||||-||||||+.|+.--- .+. +++.+-||.|+... .
T Consensus 262 a~DIKiEnF~ISA~Gk~LFvnA~L~Iv~GRRYGLVGPNG~GKTTLLkHIa~Ral------aIP-pnIDvLlCEQEvva-d 333 (807)
T KOG0066|consen 262 AMDIKIENFDISAQGKLLFVNASLTIVYGRRYGLVGPNGMGKTTLLKHIAARAL------AIP-PNIDVLLCEQEVVA-D 333 (807)
T ss_pred cccceeeeeeeecccceeeeccceEEEecceecccCCCCCchHHHHHHHHhhhc------cCC-CCCceEeeeeeeee-c
Confidence 345999999999999999999999999999999999999999999999986311 111 35678899998643 3
Q ss_pred CCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCccccc
Q 006442 175 SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGD 254 (645)
Q Consensus 175 ~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~ 254 (645)
..|..+.+..+-...........++...++.-. .... +++.........+.+...+.+.+.+|..|||+.+..+
T Consensus 334 ~t~Ai~tvl~aD~kRl~lLeee~~L~~q~e~Gd--~taa----Erl~~v~~ELraiGA~sAEarARRILAGLGFskEMQ~ 407 (807)
T KOG0066|consen 334 STSAIDTVLKADKKRLALLEEEAKLMSQIEEGD--TTAA----ERLKEVADELRAIGADSAEARARRILAGLGFSKEMQE 407 (807)
T ss_pred CcHHHHHHHHhhHHHHHHHHHHHHHHHHHHcCc--hHHH----HHHHHHHHHHHHhccccchhHHHHHHhhcCCChhHhc
Confidence 445555554333333333333334444443211 1111 1222222333457788889999999999999999999
Q ss_pred ccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCcee
Q 006442 255 RLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMGVS 334 (645)
Q Consensus 255 ~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~i~~l~~G~~ 334 (645)
+|...+|||||+||+|||||+..|.+|.|||||||||..+..||.++|+.+.+|.+|||||-.|++.+|+.|+.+++.++
T Consensus 408 rPt~kFSGGWRMRvSLARALflEPTLLMLDEPTNHLDLNAVIWLdNYLQgWkKTLLIVSHDQgFLD~VCtdIIHLD~qkL 487 (807)
T KOG0066|consen 408 RPTTKFSGGWRMRVSLARALFLEPTLLMLDEPTNHLDLNAVIWLDNYLQGWKKTLLIVSHDQGFLDSVCTDIIHLDNQKL 487 (807)
T ss_pred CCccccCCceeeehhHHHHHhcCceeeeecCCccccccceeeehhhHHhhhhheeEEEecccchHHHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHH-HHHHHHHHhhh---------hccc
Q 006442 335 RTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAE-KKLERLQEEEQ---------IEKP 404 (645)
Q Consensus 335 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~rl~~~~~---------~~~~ 404 (645)
.+|.|||.-|-.............|+++++.+..+.. .+.++..+.... ..+.|-+.-.. ...|
T Consensus 488 hyYrGNY~~FKKmY~Qk~~e~~K~yekQeK~LkelKa------~GkS~KqAEkq~Ke~ltrKq~K~~~Knq~dded~gap 561 (807)
T KOG0066|consen 488 HYYRGNYTLFKKMYAQKMQEHEKNYEKQEKQLKELKA------EGKSAKQAEKQVKEQLTRKQKKGGKKNQNDDEDAGAP 561 (807)
T ss_pred hhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCcchHHHHHHHHHHHHHHHHhccccccCccccccCH
Confidence 9999999988666666555566677777666543321 111122221111 11222211000 0001
Q ss_pred c-----cccceEEeccCCCCCCCcEEEEEeeeeeeC-CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCe
Q 006442 405 F-----QRKQMKIRFPERGRSGRSVVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRG 478 (645)
Q Consensus 405 ~-----~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~-~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~ 478 (645)
+ ..-..+|.||.+.....+++-+.+|+|.|+ .+++|++++|-|..-.+||||||||.||||||++|.|.+.|..
T Consensus 562 ELL~RpKEY~VkF~FPep~~L~PPvLGlH~VtFgy~gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~ 641 (807)
T KOG0066|consen 562 ELLQRPKEYSVKFQFPEPTKLNPPVLGLHDVTFGYPGQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPND 641 (807)
T ss_pred HHHhCchheEEEEecCCCCCCCCCeeecccccccCCCCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCc
Confidence 1 112457888988888899999999999995 5789999999999999999999999999999999999999999
Q ss_pred eEEEECceecccchhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHH
Q 006442 479 GEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (645)
Q Consensus 479 G~i~~~g~~~~~~~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral 558 (645)
|+..-+ +.+.+++|.|+..+.+..+.|..+++...+. ...++++..|+.||+..+...-.+..||||||.||+||-.-
T Consensus 642 GE~RKn-hrL~iG~FdQh~~E~L~~Eetp~EyLqr~FN-lpyq~ARK~LG~fGL~sHAHTikikdLSGGQKaRValaeLa 719 (807)
T KOG0066|consen 642 GELRKN-HRLRIGWFDQHANEALNGEETPVEYLQRKFN-LPYQEARKQLGTFGLASHAHTIKIKDLSGGQKARVALAELA 719 (807)
T ss_pred chhhcc-ceeeeechhhhhHHhhccccCHHHHHHHhcC-CChHHHHHHhhhhhhhhccceEeeeecCCcchHHHHHHHHh
Confidence 998765 5678899999988889999999999987653 45678999999999987777788899999999999999999
Q ss_pred ccCCCeEEeeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHHHh
Q 006442 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSLWF 633 (645)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~~~ 633 (645)
+..|+|||||||||+||+++...|.++|++|.+.|||||||..+|.+.....||+++..|-+..|+|++|.+-..
T Consensus 720 l~~PDvlILDEPTNNLDIESIDALaEAIney~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eIdGdFeDYkkEVL 794 (807)
T KOG0066|consen 720 LGGPDVLILDEPTNNLDIESIDALAEAINEYNGGVIMVSHDERLIVETDCNLWVVENQGIDEIDGDFEDYKKEVL 794 (807)
T ss_pred cCCCCEEEecCCCCCcchhhHHHHHHHHHhccCcEEEEecccceeeecCceEEEEccCChhhccccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998889999999999888999999976444
No 27
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.1e-72 Score=690.04 Aligned_cols=485 Identities=20% Similarity=0.344 Sum_probs=341.5
Q ss_pred cEEEEeEEEEeCC---eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCc-cEEEEcCCCceEEEEeccCcc
Q 006442 97 GVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDS-GNVIKAKSNMKIAFLSQEFEV 172 (645)
Q Consensus 97 ~i~i~nls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~-G~I~~~~~~~~i~~v~Q~~~~ 172 (645)
.|+++|++|+|++ .++|+|+||+|++|++++|+||+|||||||+++|+|+++|++ |+|.+. .+|+||+|+||+
T Consensus 614 ~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~---~~Iayv~Q~p~L 690 (1622)
T PLN03130 614 AISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIR---GTVAYVPQVSWI 690 (1622)
T ss_pred ceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEc---CeEEEEcCcccc
Confidence 5999999999964 569999999999999999999999999999999999999999 999874 479999999998
Q ss_pred CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCccc
Q 006442 173 SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADD 252 (645)
Q Consensus 173 ~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~ 252 (645)
++.||+|||..+-. .+ .+++.+.++ .+.+.++++.+ . -|+.+..
T Consensus 691 -fngTIreNI~fg~~--~d----~e~y~~vl~---------------------------a~~L~~di~~L-P-~Gd~T~I 734 (1622)
T PLN03130 691 -FNATVRDNILFGSP--FD----PERYERAID---------------------------VTALQHDLDLL-P-GGDLTEI 734 (1622)
T ss_pred -CCCCHHHHHhCCCc--cc----HHHHHHHHH---------------------------HhCcHHHHHhC-C-Ccccccc
Confidence 67899999974321 11 122333333 23333343332 1 2444444
Q ss_pred ccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHH-HHHcc--CCCeEEEEecCHHHHHhhcCeEEEE
Q 006442 253 GDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLE-GYLGK--QDVPMVIISHDRAFLDQLCTKIVET 329 (645)
Q Consensus 253 ~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~-~~L~~--~g~tvIivsHd~~~l~~~~d~i~~l 329 (645)
+++ ..+|||||||||+|||||+++|+|||||||||+||+++.+.+. +.++. .++|+|+|||+++.+.. ||+|++|
T Consensus 735 Ge~-G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~-aD~Ii~L 812 (1622)
T PLN03130 735 GER-GVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQ-VDRIILV 812 (1622)
T ss_pred cCC-CCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHh-CCEEEEE
Confidence 444 6789999999999999999999999999999999999887765 34442 48999999999998865 9999999
Q ss_pred cCceeEEeccChHHHHHHH------------------------------------------------------------H
Q 006442 330 EMGVSRTYEGNYSQYVLEK------------------------------------------------------------A 349 (645)
Q Consensus 330 ~~G~~~~~~g~~~~~~~~~------------------------------------------------------------~ 349 (645)
++|++. ..|++++..... .
T Consensus 813 ~~G~i~-e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (1622)
T PLN03130 813 HEGMIK-EEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEEEDDQTSSKPVANGNANNLKKDSSSKKKSKEGKSVLIKQ 891 (1622)
T ss_pred eCCEEE-EeCCHHHHHhcchhHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccchhhhhH
Confidence 999863 233332211000 0
Q ss_pred HHHH------HHHHHHH--------------------------------HHH----------------------------
Q 006442 350 AWIE------SQYAAWE--------------------------------KQQ---------------------------- 363 (645)
Q Consensus 350 ~~~~------~~~~~~~--------------------------------~~~---------------------------- 363 (645)
+... ..|..|. |..
T Consensus 892 e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~ 971 (1622)
T PLN03130 892 EERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTHGPLFYNLIYALLSFGQVLVTL 971 (1622)
T ss_pred HHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 0000 0000000 000
Q ss_pred --------------------------------------------------------------------------------
Q 006442 364 -------------------------------------------------------------------------------- 363 (645)
Q Consensus 364 -------------------------------------------------------------------------------- 363 (645)
T Consensus 972 ~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~ 1051 (1622)
T PLN03130 972 LNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIV 1051 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence
Q ss_pred --------------------------HHHHH-----------------------------------HHHHHH--------
Q 006442 364 --------------------------REIEQ-----------------------------------TKDLIN-------- 374 (645)
Q Consensus 364 --------------------------~~~~~-----------------------------------~~~~~~-------- 374 (645)
++.++ ..+.++
T Consensus 1052 ~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~ 1131 (1622)
T PLN03130 1052 STISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLV 1131 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 000000
Q ss_pred -----Hh----------------------ccCC--c----hhhHH------------------------HHHHHHHHHHH
Q 006442 375 -----RL----------------------GAGA--N----SGRAS------------------------SAEKKLERLQE 397 (645)
Q Consensus 375 -----~l----------------------~~~~--~----~~~~~------------------------~~~~~l~rl~~ 397 (645)
++ .... . ++..+ .....++|+.+
T Consensus 1132 ~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e 1211 (1622)
T PLN03130 1132 NMSSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGT 1211 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000 0 00000 00000011111
Q ss_pred hhhhcccccccceEEeccCCCCCCCcEEEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC
Q 006442 398 EEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK 475 (645)
Q Consensus 398 ~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~ 475 (645)
.... +++........-|+..|+.++.|+++||+++|++ +++|+|+||+|++||++||||+||||||||+++|+|+++
T Consensus 1212 ~~~~-~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~ 1290 (1622)
T PLN03130 1212 YIDL-PSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE 1290 (1622)
T ss_pred HhCC-CCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC
Confidence 1100 0000000000012233555667999999999964 379999999999999999999999999999999999999
Q ss_pred CCeeEEEECceecc----------cchhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhh--------
Q 006442 476 PRGGEVLLGEHNVL----------PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML-------- 537 (645)
Q Consensus 476 p~~G~i~~~g~~~~----------~~~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~-------- 537 (645)
|++|+|.+||.++. .++++|+ + ..++.|+++|+.... ...++++.+++++.++. +..
T Consensus 1291 p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQd--p-~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~-~~I~~lp~GLd 1365 (1622)
T PLN03130 1291 LERGRILIDGCDISKFGLMDLRKVLGIIPQA--P-VLFSGTVRFNLDPFN-EHNDADLWESLERAHLK-DVIRRNSLGLD 1365 (1622)
T ss_pred CCCceEEECCEecccCCHHHHHhccEEECCC--C-ccccccHHHHhCcCC-CCCHHHHHHHHHHcCcH-HHHHhCccccC
Confidence 99999999999873 2345554 3 346789999997654 45677888888888773 222
Q ss_pred ---ccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEE
Q 006442 538 ---DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVE 612 (645)
Q Consensus 538 ---~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~ 612 (645)
.....+||||||||+||||||+++|+|||||||||+||.++.+.+++.|++. +.|||+|+|+++++.+ ||||++
T Consensus 1366 t~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~-~DrIlV 1444 (1622)
T PLN03130 1366 AEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILV 1444 (1622)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHh-CCEEEE
Confidence 2233589999999999999999999999999999999999999999999864 3699999999999987 999999
Q ss_pred EeCCeEEeeCCChhHHHHH
Q 006442 613 VKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 613 l~~g~i~~~~~~~~~~~~~ 631 (645)
|++|+++++ |+++++++.
T Consensus 1445 Ld~G~IvE~-Gt~~eLl~~ 1462 (1622)
T PLN03130 1445 LDAGRVVEF-DTPENLLSN 1462 (1622)
T ss_pred EECCEEEEe-CCHHHHHhC
Confidence 999999974 777777643
No 28
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.6e-71 Score=684.73 Aligned_cols=205 Identities=19% Similarity=0.377 Sum_probs=175.0
Q ss_pred CCCCcEEEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-------
Q 006442 419 RSGRSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------- 489 (645)
Q Consensus 419 ~~~~~~i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------- 489 (645)
|+..+.|+++||+++|++ +++|+|+||+|++||++|||||||||||||+++|+|+++|++|+|.+||.++.
T Consensus 1229 ~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~l 1308 (1495)
T PLN03232 1229 WPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDL 1308 (1495)
T ss_pred CCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHH
Confidence 455567999999999953 47999999999999999999999999999999999999999999999999873
Q ss_pred ---cchhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhh-----------ccCcCcCCHhHHHHHHHH
Q 006442 490 ---PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML-----------DRKVSLLSGGEKARLAFC 555 (645)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~-----------~~~~~~LSgGqkqrv~lA 555 (645)
.++++|+ +.+ ++.|+++|+.... ...++++.++++..++. +.. .....+||||||||+|||
T Consensus 1309 R~~i~iVpQd--p~L-F~gTIr~NL~~~~-~~sdeei~~al~~a~l~-~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLA 1383 (1495)
T PLN03232 1309 RRVLSIIPQS--PVL-FSGTVRFNIDPFS-EHNDADLWEALERAHIK-DVIDRNPFGLDAEVSEGGENFSVGQRQLLSLA 1383 (1495)
T ss_pred HhhcEEECCC--Cee-eCccHHHHcCCCC-CCCHHHHHHHHHHcCCH-HHHHhCcCCCCceecCCCCCCCHHHHHHHHHH
Confidence 2345554 334 5789999997653 45677888888888774 222 233458999999999999
Q ss_pred HHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|||+++|+|||||||||+||.++.+.+++.|++. +.|||+|+|+++++.+ ||||++|++|+++++ |+++++++
T Consensus 1384 RALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~-Gt~~eLl~ 1458 (1495)
T PLN03232 1384 RALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIID-CDKILVLSSGQVLEY-DSPQELLS 1458 (1495)
T ss_pred HHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHh-CCEEEEEECCEEEEE-CCHHHHHh
Confidence 9999999999999999999999999999999865 4699999999999988 999999999999974 77777764
No 29
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2e-70 Score=677.68 Aligned_cols=208 Identities=22% Similarity=0.379 Sum_probs=176.1
Q ss_pred CCCCCcEEEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc------
Q 006442 418 GRSGRSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------ 489 (645)
Q Consensus 418 ~~~~~~~i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------ 489 (645)
.|+.++.|+++||+++|++ .++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||.++.
T Consensus 1278 ~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~ 1357 (1522)
T TIGR00957 1278 GWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHD 1357 (1522)
T ss_pred CCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHH
Confidence 4566677999999999974 46999999999999999999999999999999999999999999999999873
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChh------hhcc----CcCcCCHhHHHHHHHH
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKAD------MLDR----KVSLLSGGEKARLAFC 555 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~------~~~~----~~~~LSgGqkqrv~lA 555 (645)
.++++|+ + ..++.|+++|+... ....++++.++|+.+++... -.+. ...+||||||||+|||
T Consensus 1358 LR~~i~iVpQd--p-~LF~gTIr~NLdp~-~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LA 1433 (1522)
T TIGR00957 1358 LRFKITIIPQD--P-VLFSGSLRMNLDPF-SQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLA 1433 (1522)
T ss_pred HHhcCeEECCC--C-cccCccHHHHcCcc-cCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHH
Confidence 2345554 2 34678999999632 24667788888888877421 1232 3357999999999999
Q ss_pred HHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
|||+++|+||||||||++||.++...|++.|++. +.|||+|+|+++.+.+ ||||++|++|+++++ |+++++++.
T Consensus 1434 RALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~-~DrIlVld~G~IvE~-G~~~eLl~~ 1509 (1522)
T TIGR00957 1434 RALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMD-YTRVIVLDKGEVAEF-GAPSNLLQQ 1509 (1522)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHh-CCEEEEEECCEEEEE-CCHHHHHhC
Confidence 9999999999999999999999999999999864 3599999999999987 899999999999975 788887653
No 30
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.2e-71 Score=594.38 Aligned_cols=433 Identities=25% Similarity=0.402 Sum_probs=354.6
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceE
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKI 163 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i 163 (645)
.+.++++|++|+|++.++|++|||+|.+||+++|+|.||||||||+|+|+|.++|++|+|.++|.. ..|
T Consensus 6 ~~ll~~~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~GI 85 (500)
T COG1129 6 PPLLELRGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAGI 85 (500)
T ss_pred cceeeeecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCCc
Confidence 346999999999999999999999999999999999999999999999999999999999999753 259
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhc
Q 006442 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (645)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (645)
+.++|+..+.+++||.|||+.+-... .....++...+.++.+++|
T Consensus 86 ~~V~QEl~L~p~LsVaeNifLgre~~-----------------------------------~~~g~id~~~m~~~A~~~l 130 (500)
T COG1129 86 ATVHQELSLVPNLSVAENIFLGREPT-----------------------------------RRFGLIDRKAMRRRARELL 130 (500)
T ss_pred EEEeechhccCCccHHHHhhcccccc-----------------------------------cCCCccCHHHHHHHHHHHH
Confidence 99999999999999999996321100 0012245556778888999
Q ss_pred hhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHHH
Q 006442 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFLD 320 (645)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L---~~~g~tvIivsHd~~~l~ 320 (645)
..+|+.. ..+.++.+||+||||.|+|||||..+++||||||||++|+....+.|++++ +++|.+||+|||+++++.
T Consensus 131 ~~lg~~~-~~~~~v~~LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~ 209 (500)
T COG1129 131 ARLGLDI-DPDTLVGDLSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVF 209 (500)
T ss_pred HHcCCCC-ChhhhhhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHH
Confidence 9999863 388899999999999999999999999999999999999999999998875 568999999999999999
Q ss_pred hhcCeEEEEcCceeEEeccC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHhh
Q 006442 321 QLCTKIVETEMGVSRTYEGN-YSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEE 399 (645)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~ 399 (645)
++||||.+|+||+... ... ..++-. .+++..+- |+ .
T Consensus 210 ~i~DritVlRDG~~v~-~~~~~~~~~~-----------------------~~lv~~Mv-----Gr------~-------- 246 (500)
T COG1129 210 EIADRITVLRDGRVVG-TRPTAAETSE-----------------------DELVRLMV-----GR------E-------- 246 (500)
T ss_pred HhcCEEEEEeCCEEee-ecccccCCCH-----------------------HHHHHHhh-----Cc------c--------
Confidence 9999999999998531 111 000000 00111110 00 0
Q ss_pred hhcccccccceEEecc--CCCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC
Q 006442 400 QIEKPFQRKQMKIRFP--ERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR 477 (645)
Q Consensus 400 ~~~~~~~~~~~~~~~p--~~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~ 477 (645)
... .|| .....++++++++|++..- .++++||++++||++||.|--|||+|-|+++|+|..++.
T Consensus 247 -~~~---------~~~~~~~~~~~~~~l~v~~l~~~~----~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~ 312 (500)
T COG1129 247 -LED---------LFPEPPEEGIGEPVLEVRNLSGGG----KVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPAS 312 (500)
T ss_pred -hhh---------hcccccccCCCCcEEEEecCCCCC----ceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCC
Confidence 000 011 1113467789999998542 589999999999999999999999999999999999999
Q ss_pred eeEEEECceeccc-----------chhcc-chhhcCCCCCCHHHHHHhhhc-c----------ccHHHHHHHHhhcCCCh
Q 006442 478 GGEVLLGEHNVLP-----------NYFEQ-NQAEALDLDKTVLETVAEAAE-D----------WRIDDIKGLLGRCNFKA 534 (645)
Q Consensus 478 ~G~i~~~g~~~~~-----------~~~~q-~~~~~l~~~~tv~e~v~~~~~-~----------~~~~~~~~~L~~~~l~~ 534 (645)
+|+|.++|.++.. +|++. ...+.+...+++.+|+..... . ...+.+..+...+++..
T Consensus 313 ~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~ 392 (500)
T COG1129 313 SGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKT 392 (500)
T ss_pred CceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCccc
Confidence 9999999987632 24432 244678889999999865411 0 11234677888999988
Q ss_pred hhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEE
Q 006442 535 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVV 611 (645)
Q Consensus 535 ~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~ 611 (645)
...+.++.+||||.||||+|||+|..+|++|||||||.|+|..++..+.++|+++ +.+||+||-++.++..+||||+
T Consensus 393 ~s~~~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIl 472 (500)
T COG1129 393 PSPEQPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRIL 472 (500)
T ss_pred CCccchhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEE
Confidence 7788999999999999999999999999999999999999999999999999876 5699999999999999999999
Q ss_pred EEeCCeEEe
Q 006442 612 EVKGSNLQD 620 (645)
Q Consensus 612 ~l~~g~i~~ 620 (645)
+|.+|+++.
T Consensus 473 Vm~~Gri~~ 481 (500)
T COG1129 473 VMREGRIVG 481 (500)
T ss_pred EEECCEEEE
Confidence 999999975
No 31
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.6e-66 Score=637.00 Aligned_cols=204 Identities=24% Similarity=0.414 Sum_probs=174.8
Q ss_pred cEEEEEeeeeeeCC---eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----------------------
Q 006442 423 SVVTIKNLEFGYED---RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP----------------------- 476 (645)
Q Consensus 423 ~~i~~~~v~~~y~~---~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p----------------------- 476 (645)
+-|+++||+|+|++ +++|+|+||+|++|+++||+||||||||||+++|+|+++|
T Consensus 1164 g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~ 1243 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQ 1243 (1466)
T ss_pred ceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccccc
Confidence 45999999999963 4799999999999999999999999999999999999998
Q ss_pred -------------------------------CeeEEEECceecc----------cchhccchhhcCCCCCCHHHHHHhhh
Q 006442 477 -------------------------------RGGEVLLGEHNVL----------PNYFEQNQAEALDLDKTVLETVAEAA 515 (645)
Q Consensus 477 -------------------------------~~G~i~~~g~~~~----------~~~~~q~~~~~l~~~~tv~e~v~~~~ 515 (645)
++|+|.+||.++. .+|++|+ + ..++.|++|||..+.
T Consensus 1244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qe--p-~LF~gTIreNI~~g~ 1320 (1466)
T PTZ00265 1244 GDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQE--P-MLFNMSIYENIKFGK 1320 (1466)
T ss_pred cccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCC--C-ccccccHHHHHhcCC
Confidence 6999999999873 2455554 2 346899999999986
Q ss_pred ccccHHHHHHHHhhcCCCh------hhhc----cCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHH
Q 006442 516 EDWRIDDIKGLLGRCNFKA------DMLD----RKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEA 585 (645)
Q Consensus 516 ~~~~~~~~~~~L~~~~l~~------~~~~----~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~ 585 (645)
+....+++..+++..++.. +-.+ .....||||||||+||||||+++|+|||||||||+||.++.+.+++.
T Consensus 1321 ~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~ 1400 (1466)
T PTZ00265 1321 EDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKT 1400 (1466)
T ss_pred CCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH
Confidence 6667778888888777631 1112 33457999999999999999999999999999999999999999999
Q ss_pred HHhc----CceEEEEecCHHHHHhhCCEEEEEeC----CeEEeeCCChhHHHH
Q 006442 586 ISEY----KGTVITVSHDRYFVKQIVNRVVEVKG----SNLQDYAGDYNQVQS 630 (645)
Q Consensus 586 l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~----g~i~~~~~~~~~~~~ 630 (645)
|.+. +.|+|+|||++..+.. ||+|++|++ |+++...|.++++++
T Consensus 1401 L~~~~~~~~~TvIiIaHRlsti~~-aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1401 IVDIKDKADKTIITIAHRIASIKR-SDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred HHHHhccCCCEEEEEechHHHHHh-CCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 9875 4699999999999976 999999998 897655799999875
No 32
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.6e-66 Score=639.75 Aligned_cols=203 Identities=21% Similarity=0.329 Sum_probs=173.2
Q ss_pred CcEEEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------
Q 006442 422 RSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (645)
.+.|+++||+++|++ .++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||.++.
T Consensus 1306 ~G~I~f~nVsf~Y~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~ 1385 (1560)
T PTZ00243 1306 AGSLVFEGVQMRYREGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQ 1385 (1560)
T ss_pred CCeEEEEEEEEEeCCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhc
Confidence 456999999999964 35999999999999999999999999999999999999999999999999873
Q ss_pred cchhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhh------hc----cCcCcCCHhHHHHHHHHHHHc
Q 006442 490 PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADM------LD----RKVSLLSGGEKARLAFCKFMV 559 (645)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~------~~----~~~~~LSgGqkqrv~lAral~ 559 (645)
.++++|+ + ..++.|+++|+... ....++++..+++.+++.... .+ ....+||||||||+||||||+
T Consensus 1386 I~iVpQd--p-~LF~gTIreNIdp~-~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL 1461 (1560)
T PTZ00243 1386 FSMIPQD--P-VLFDGTVRQNVDPF-LEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALL 1461 (1560)
T ss_pred ceEECCC--C-ccccccHHHHhCcc-cCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHh
Confidence 2345554 2 34678999999653 345678899999998884211 12 233579999999999999999
Q ss_pred cC-CCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 560 KP-STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 560 ~~-p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
++ |+|||||||||+||.++.+.+++.|++. +.|||+|+|+++.+.. ||+|++|++|++++ .|.++++++
T Consensus 1462 ~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~VvE-~Gt~~eLl~ 1533 (1560)
T PTZ00243 1462 KKGSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQ-YDKIIVMDHGAVAE-MGSPRELVM 1533 (1560)
T ss_pred cCCCCEEEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHh-CCEEEEEECCEEEE-ECCHHHHHh
Confidence 95 8999999999999999999999999864 3599999999999987 99999999999997 488888764
No 33
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3e-66 Score=638.84 Aligned_cols=206 Identities=21% Similarity=0.376 Sum_probs=173.9
Q ss_pred CCCCCcEEEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc------
Q 006442 418 GRSGRSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------ 489 (645)
Q Consensus 418 ~~~~~~~i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------ 489 (645)
.|+..+.|+++||+++|++ +++|+|+||+|++||++||||+||||||||+++|+|+++ .+|+|.+||.++.
T Consensus 1211 ~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~ 1289 (1490)
T TIGR01271 1211 CWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQT 1289 (1490)
T ss_pred CCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHH
Confidence 4666678999999999964 679999999999999999999999999999999999997 7999999999873
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhh------hccC----cCcCCHhHHHHHHHH
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADM------LDRK----VSLLSGGEKARLAFC 555 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~------~~~~----~~~LSgGqkqrv~lA 555 (645)
.++++|+ + ..++.|+++|+... ....++++.++|+++++.... .+.. ..+||||||||+|||
T Consensus 1290 lR~~is~IpQd--p-~LF~GTIR~NLdp~-~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LA 1365 (1490)
T TIGR01271 1290 WRKAFGVIPQK--V-FIFSGTFRKNLDPY-EQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLA 1365 (1490)
T ss_pred HHhceEEEeCC--C-ccCccCHHHHhCcc-cCCCHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHH
Confidence 2345554 3 34678999999543 345678899999998884211 1222 237999999999999
Q ss_pred HHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|||+++|+||||||||++||.++...|++.|++. +.|||+|||+++.+.. ||+|++|++|+++++ |.+.++.+
T Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-~DrIlvL~~G~ivE~-g~p~~Ll~ 1440 (1490)
T TIGR01271 1366 RSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLE-CQQFLVIEGSSVKQY-DSIQKLLN 1440 (1490)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHh-CCEEEEEECCEEEEe-CCHHHHHc
Confidence 9999999999999999999999999999999865 3599999999999987 999999999999975 66676653
No 34
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=4e-67 Score=553.22 Aligned_cols=437 Identities=25% Similarity=0.392 Sum_probs=358.2
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEE
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~ 164 (645)
..+++++++|.|++..++++|||+|++||++||+|.||||||||+++|.|+++|++|+|.++|+. ..||
T Consensus 3 ~~l~~~~itK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~GIG 82 (501)
T COG3845 3 PALEMRGITKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLGIG 82 (501)
T ss_pred ceEEEeccEEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcCCc
Confidence 46999999999999999999999999999999999999999999999999999999999999863 2599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
+|+|++.+.+++||.|||..+.... ....++....++++.++.+
T Consensus 83 MVhQHF~Lv~~lTV~ENiiLg~e~~------------------------------------~~~~~~~~~~~~~i~~l~~ 126 (501)
T COG3845 83 MVHQHFMLVPTLTVAENIILGLEPS------------------------------------KGGLIDRRQARARIKELSE 126 (501)
T ss_pred EEeeccccccccchhhhhhhcCccc------------------------------------cccccCHHHHHHHHHHHHH
Confidence 9999999999999999997443210 0001334456788889999
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHHHh
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L---~~~g~tvIivsHd~~~l~~ 321 (645)
.+|++ -..+..+.+||-||||||.|-+||+.+|++|||||||+-|-|...+.|+..| ++.|+|||+|||.++++.+
T Consensus 127 ~yGl~-vdp~~~V~dLsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~ 205 (501)
T COG3845 127 RYGLP-VDPDAKVADLSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMA 205 (501)
T ss_pred HhCCC-CCccceeecCCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHH
Confidence 99997 5678899999999999999999999999999999999999999999998876 4689999999999999999
Q ss_pred hcCeEEEEcCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHhhhh
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQI 401 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~~ 401 (645)
+|||+.+++.|+.. |.++.. .. ...+++ .++.--..+
T Consensus 206 iaDrvTVLR~Gkvv---gt~~~~-~~-------------~t~~el--------------------------a~lMvG~~v 242 (501)
T COG3845 206 IADRVTVLRRGKVV---GTVDPV-AE-------------TTEEEL--------------------------AELMVGREV 242 (501)
T ss_pred hhCeeEEEeCCeEE---eeecCC-CC-------------CCHHHH--------------------------HHHhcCCcc
Confidence 99999999999863 222100 00 000011 111000001
Q ss_pred cccccccceEEeccCCCCCCCcEEEEEeeeeeeCC-eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeE
Q 006442 402 EKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGE 480 (645)
Q Consensus 402 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~-~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~ 480 (645)
..+.. ..+..++++++++++++..-.. ...++++||+|++||++||.|-.|.|.+.|+.+|+|+.+|.+|+
T Consensus 243 ~~~~~--------~~~~~pg~~vL~V~~L~v~~~~~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~ 314 (501)
T COG3845 243 VLRVV--------KPPSTPGEVVLEVEDLSVKDRRGVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGR 314 (501)
T ss_pred ccccc--------cCCCCCCCeEEEEeeeEeecCCCCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCce
Confidence 11100 0223467899999999987643 46799999999999999999999999999999999999999999
Q ss_pred EEECceec----cc--------chhccc-hhhcCCCCCCHHHHHHhhhcc-----------c--cHHHHHHHHhhcCCCh
Q 006442 481 VLLGEHNV----LP--------NYFEQN-QAEALDLDKTVLETVAEAAED-----------W--RIDDIKGLLGRCNFKA 534 (645)
Q Consensus 481 i~~~g~~~----~~--------~~~~q~-~~~~l~~~~tv~e~v~~~~~~-----------~--~~~~~~~~L~~~~l~~ 534 (645)
|.++|.++ .+ +|++.+ +...+.+++|+.+|+...... + -.....+++++|++..
T Consensus 315 I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~ 394 (501)
T COG3845 315 ILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRA 394 (501)
T ss_pred EEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccC
Confidence 99999986 11 244433 355678899999998765321 1 1234678899999976
Q ss_pred hhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEE
Q 006442 535 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVV 611 (645)
Q Consensus 535 ~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~ 611 (645)
.....++.+||||++||+-+||-|.++|++||..+||.|||..+.+.+.+.|.+. +.+||+||-|++++..+||||.
T Consensus 395 ~~~~~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIa 474 (501)
T COG3845 395 PSPDAPARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIA 474 (501)
T ss_pred CCCCcchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheee
Confidence 6667889999999999999999999999999999999999999999999988754 5699999999999999999999
Q ss_pred EEeCCeEEe
Q 006442 612 EVKGSNLQD 620 (645)
Q Consensus 612 ~l~~g~i~~ 620 (645)
+|.+|+++.
T Consensus 475 Vi~~Gri~~ 483 (501)
T COG3845 475 VIYEGRIVG 483 (501)
T ss_pred eeeCCceec
Confidence 999999974
No 35
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2e-62 Score=600.40 Aligned_cols=207 Identities=22% Similarity=0.269 Sum_probs=178.7
Q ss_pred cEEEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------cc
Q 006442 423 SVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PN 491 (645)
Q Consensus 423 ~~i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~ 491 (645)
.+|+++|+++.|++ +.+++++||+|++||++||+|+||||||||+|+|+|+++|++|+|.++|.++. .+
T Consensus 1936 ~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~~~~~~r~~IG 2015 (2272)
T TIGR01257 1936 DILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISDVHQNMG 2015 (2272)
T ss_pred ceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcchHHHHhhhEE
Confidence 36999999999985 57999999999999999999999999999999999999999999999998763 34
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeE
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 565 (645)
|.+|. ..+...+|++|++...... . ..+.+.++|+.+++ .+..++++.+|||||||||+||+||+.+|+||
T Consensus 2016 y~pQ~--~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL-~~~~dk~~~~LSGGqKqRLslA~ALi~~P~VL 2092 (2272)
T TIGR01257 2016 YCPQF--DAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGL-SLYADRLAGTYSGGNKRKLSTAIALIGCPPLV 2092 (2272)
T ss_pred EEecc--ccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-HHHhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 55554 3566789999999764221 1 12345678999999 46789999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHHHh
Q 006442 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSLWF 633 (645)
Q Consensus 566 lLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~~~ 633 (645)
||||||+|||+.+++.+.+.|.+. +.|||++||++++++.+|||+++|++|++.. .|+..++.+.+.
T Consensus 2093 LLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~-~Gs~q~Lk~~~g 2162 (2272)
T TIGR01257 2093 LLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQC-LGTIQHLKSKFG 2162 (2272)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHHHHHhC
Confidence 999999999999999999999864 4599999999999999999999999999985 577777655443
No 36
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.6e-59 Score=572.99 Aligned_cols=198 Identities=21% Similarity=0.308 Sum_probs=167.3
Q ss_pred cEEEEEeeeeeeC----CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC---CCeeEEEECceecc------
Q 006442 423 SVVTIKNLEFGYE----DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK---PRGGEVLLGEHNVL------ 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~----~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~---p~~G~i~~~g~~~~------ 489 (645)
.+++++||++.|+ .+.+|+|+|++|++||++||+|||||||||||++|+|+.+ |++|+|.++|.++.
T Consensus 758 ~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~~~~~~ 837 (1394)
T TIGR00956 758 DIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDSSFQRS 837 (1394)
T ss_pred ceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECChhhhcc
Confidence 3589999999995 3579999999999999999999999999999999999997 78899999998763
Q ss_pred cchhccchhhcCCCCCCHHHHHHhhhcc-----cc----HHHHHHHHhhcCCChhhhccCcC----cCCHhHHHHHHHHH
Q 006442 490 PNYFEQNQAEALDLDKTVLETVAEAAED-----WR----IDDIKGLLGRCNFKADMLDRKVS----LLSGGEKARLAFCK 556 (645)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~v~~~~~~-----~~----~~~~~~~L~~~~l~~~~~~~~~~----~LSgGqkqrv~lAr 556 (645)
.+|+.|+ +.+.+..||+|++...... .. .+.+.++++.+++. +..++.++ .|||||||||+||+
T Consensus 838 i~yv~Q~--~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~d~~v~~~~~~LSgGqrqRl~Ia~ 914 (1394)
T TIGR00956 838 IGYVQQQ--DLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEME-SYADAVVGVPGEGLNVEQRKRLTIGV 914 (1394)
T ss_pred eeeeccc--ccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCh-hhCCCeeCCCCCCCCHHHhhHHHHHH
Confidence 2456654 3456789999999865321 11 23467899999994 66787776 79999999999999
Q ss_pred HHccCCC-eEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHH-HHhhCCEEEEEeCC-eEEeeCCC
Q 006442 557 FMVKPST-LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYF-VKQIVNRVVEVKGS-NLQDYAGD 624 (645)
Q Consensus 557 al~~~p~-lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~-i~~~~d~v~~l~~g-~i~~~~~~ 624 (645)
+|+.+|+ ||+|||||+|||..++..+.+.|++. +.|||+++|+++. +.+.||++++|++| +++.. |+
T Consensus 915 aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~-G~ 987 (1394)
T TIGR00956 915 ELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYF-GD 987 (1394)
T ss_pred HHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEE-CC
Confidence 9999997 99999999999999999999999865 4699999999987 45679999999987 88754 44
No 37
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.6e-56 Score=546.49 Aligned_cols=198 Identities=19% Similarity=0.300 Sum_probs=164.4
Q ss_pred EEEEEeeeeeeC-------------CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC--CeeEEEECceec
Q 006442 424 VVTIKNLEFGYE-------------DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP--RGGEVLLGEHNV 488 (645)
Q Consensus 424 ~i~~~~v~~~y~-------------~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p--~~G~i~~~g~~~ 488 (645)
.+.++||++..+ .+.+|+|+|++|++|++++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 488999998763 23699999999999999999999999999999999999763 689999999764
Q ss_pred c-------cchhccchhhcCCCCCCHHHHHHhhhc-----ccc----HHHHHHHHhhcCCChhhhccCc-----CcCCHh
Q 006442 489 L-------PNYFEQNQAEALDLDKTVLETVAEAAE-----DWR----IDDIKGLLGRCNFKADMLDRKV-----SLLSGG 547 (645)
Q Consensus 489 ~-------~~~~~q~~~~~l~~~~tv~e~v~~~~~-----~~~----~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 547 (645)
. .+|+.|+ +.+.+..||+|++.+... ... .+.+.++++.+++. +..++.+ ..||||
T Consensus 947 ~~~~~~~~igyv~Q~--d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~-~~~~~~vg~~~~~~LSgG 1023 (1470)
T PLN03140 947 KQETFARISGYCEQN--DIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELD-NLKDAIVGLPGVTGLSTE 1023 (1470)
T ss_pred ChHHhhhheEEEccc--cccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCCh-hHhCCccCCCCCCCcCHH
Confidence 2 2456654 346678999999987531 111 23467899999994 5667765 589999
Q ss_pred HHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHH-HHHhhCCEEEEEeC-CeEEeeC
Q 006442 548 EKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRY-FVKQIVNRVVEVKG-SNLQDYA 622 (645)
Q Consensus 548 qkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~-~i~~~~d~v~~l~~-g~i~~~~ 622 (645)
|||||+||++|+.+|+||+|||||+|||..++..+.+.|++. +.|||+++|+++ .+.+.||++++|++ |+++. .
T Consensus 1024 erkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~-~ 1102 (1470)
T PLN03140 1024 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY-S 1102 (1470)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEE-E
Confidence 999999999999999999999999999999999999999865 569999999998 47788999999986 88874 4
Q ss_pred CCh
Q 006442 623 GDY 625 (645)
Q Consensus 623 ~~~ 625 (645)
|+.
T Consensus 1103 G~~ 1105 (1470)
T PLN03140 1103 GPL 1105 (1470)
T ss_pred CCc
Confidence 553
No 38
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.2e-52 Score=395.16 Aligned_cols=210 Identities=29% Similarity=0.480 Sum_probs=185.7
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~~ 165 (645)
+|+++|++|+|++..+|++||++|++||+++|+||+|||||||||||.|+.+|++|+|.++|.. .++|+
T Consensus 2 mi~i~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vGm 81 (240)
T COG1126 2 MIEIKNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVGM 81 (240)
T ss_pred eEEEEeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcCe
Confidence 5899999999999999999999999999999999999999999999999999999999999842 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
|+|++++|+.+||.||++.+.-. ....+..+.+++..++|++
T Consensus 82 VFQ~fnLFPHlTvleNv~lap~~--------------------------------------v~~~~k~eA~~~A~~lL~~ 123 (240)
T COG1126 82 VFQQFNLFPHLTVLENVTLAPVK--------------------------------------VKKLSKAEAREKALELLEK 123 (240)
T ss_pred ecccccccccchHHHHHHhhhHH--------------------------------------HcCCCHHHHHHHHHHHHHH
Confidence 99999999999999999743211 1123445667788899999
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHHHhh
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFLDQL 322 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L---~~~g~tvIivsHd~~~l~~~ 322 (645)
+|+. +..+.+|.+|||||||||||||||+.+|+++|+|||||+|||+....+.+.+ .+.|.|+|+|||++.|+.++
T Consensus 124 VGL~-~ka~~yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~V 202 (240)
T COG1126 124 VGLA-DKADAYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREV 202 (240)
T ss_pred cCch-hhhhhCccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHh
Confidence 9997 6789999999999999999999999999999999999999999999888765 56799999999999999999
Q ss_pred cCeEEEEcCceeEEeccChHHHHH
Q 006442 323 CTKIVETEMGVSRTYEGNYSQYVL 346 (645)
Q Consensus 323 ~d~i~~l~~G~~~~~~g~~~~~~~ 346 (645)
+|||++|++|++. -.|+.++++.
T Consensus 203 adrviFmd~G~ii-e~g~p~~~f~ 225 (240)
T COG1126 203 ADRVIFMDQGKII-EEGPPEEFFD 225 (240)
T ss_pred hheEEEeeCCEEE-EecCHHHHhc
Confidence 9999999999874 3456555544
No 39
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=3.8e-50 Score=417.10 Aligned_cols=434 Identities=26% Similarity=0.397 Sum_probs=285.3
Q ss_pred eEEEEeCCe-eeeeeeeE-EEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCccCCCCCHH
Q 006442 102 NISKSYKGV-TVLKDVTW-EVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVR 179 (645)
Q Consensus 102 nls~~y~~~-~vL~~vsl-~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~~Tv~ 179 (645)
++.-+|+.. ..|- .| ...+|+++||+|+||-||||-+++|+|++.|.=|+.- .| +-|
T Consensus 79 e~vHRYg~NgFkL~--~LP~pr~G~V~GilG~NGiGKsTalkILaGel~PNLG~~~-------------~p------p~w 137 (591)
T COG1245 79 EVVHRYGVNGFKLY--RLPTPRPGKVVGILGPNGIGKSTALKILAGELKPNLGRYE-------------DP------PSW 137 (591)
T ss_pred cceeeccCCceEEe--cCCCCCCCcEEEEEcCCCccHHHHHHHHhCccccCCCCCC-------------CC------CCH
Confidence 456777543 1222 22 4568999999999999999999999999999766421 11 113
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhc----cchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcccccc
Q 006442 180 EEFMSAFKEEMEIAGKLERVQKALESA----VDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDR 255 (645)
Q Consensus 180 eni~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~ 255 (645)
|++...|... .++.+.+.+..- ......++.+...+.- ...+.+....-.-..+++.+.+++. ...+|
T Consensus 138 deVi~~FrGt-----ELq~YF~~l~~g~~r~v~K~QYVd~iPk~~KG--~v~elLk~~de~g~~devve~l~L~-nvl~r 209 (591)
T COG1245 138 DEVIKRFRGT-----ELQNYFKKLYEGELRAVHKPQYVDLIPKVVKG--KVGELLKKVDERGKFDEVVERLGLE-NVLDR 209 (591)
T ss_pred HHHHHHhhhh-----HHHHHHHHHHcCCcceecchHHHHHHHHHhcc--hHHHHHHhhhhcCcHHHHHHHhcch-hhhhh
Confidence 3433222210 011111111000 0000111111000000 0000000001112456778888986 68899
Q ss_pred cCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEEc--
Q 006442 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVETE-- 330 (645)
Q Consensus 256 ~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~i~~l~-- 330 (645)
.+.+|||||.||+|||.++++++|++++|||+|.||...+-...+.++ +.+++||+|.||+..++.++|.|.++-
T Consensus 210 ~v~~LSGGELQr~aIaa~l~rdADvY~FDEpsSyLDi~qRl~~ar~Irel~~~~k~ViVVEHDLavLD~lsD~vhI~YG~ 289 (591)
T COG1245 210 DVSELSGGELQRVAIAAALLRDADVYFFDEPSSYLDIRQRLNAARVIRELAEDGKYVIVVEHDLAVLDYLSDFVHILYGE 289 (591)
T ss_pred hhhhcCchHHHHHHHHHHHhccCCEEEEcCCcccccHHHHHHHHHHHHHHhccCCeEEEEechHHHHHHhhheeEEEecC
Confidence 999999999999999999999999999999999999988766555443 348999999999999999999887763
Q ss_pred CceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHhhhhcccccccce
Q 006442 331 MGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQM 410 (645)
Q Consensus 331 ~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~ 410 (645)
.|.-......++. + ..+..+ |.+. +.+++ ....+...
T Consensus 290 pg~YGvvs~p~sv----r-~gIN~y--------------------L~Gy---------------l~~EN---~R~R~~~I 326 (591)
T COG1245 290 PGVYGVVSKPKSV----R-VGINEY--------------------LKGY---------------LPEEN---VRFRPEEI 326 (591)
T ss_pred CccceEeccchHH----H-HHHHHH--------------------Hhcc---------------Cchhc---ccccccce
Confidence 2221111122110 0 000000 0000 00000 00011122
Q ss_pred EEec-cCCCCCC-CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceec
Q 006442 411 KIRF-PERGRSG-RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV 488 (645)
Q Consensus 411 ~~~~-p~~~~~~-~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~ 488 (645)
.|.. ++..... +.+++..++.+.|++.. |.--.=+|..||+++++||||.||||+.++|+|.++|++|. ..++
T Consensus 327 ~F~~~~~~~~~~~~~lv~y~~~~k~~g~F~-L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~~ 401 (591)
T COG1245 327 EFEEKPPRDDKARDTLVEYPDLKKTYGDFK-LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EEDL 401 (591)
T ss_pred eeeccCcccccccceeeecchheeecCceE-EEecCCeeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Cccc
Confidence 2221 1122222 56677788888887432 33333456778999999999999999999999999999998 3345
Q ss_pred ccchhccchhhcCCCCCCHHHHHHhhhcc-cc-HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEE
Q 006442 489 LPNYFEQNQAEALDLDKTVLETVAEAAED-WR-IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (645)
Q Consensus 489 ~~~~~~q~~~~~l~~~~tv~e~v~~~~~~-~~-~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 566 (645)
+..|-+|...+ .++.||.+.+...... +. .....++++.+++ .+..++++..|||||.|||+||.+|.++++|.|
T Consensus 402 ~vSyKPQyI~~--~~~gtV~~~l~~~~~~~~~~s~~~~ei~~pl~l-~~i~e~~v~~LSGGELQRvaIaa~L~reADlYl 478 (591)
T COG1245 402 KVSYKPQYISP--DYDGTVEDLLRSAIRSAFGSSYFKTEIVKPLNL-EDLLERPVDELSGGELQRVAIAAALSREADLYL 478 (591)
T ss_pred eEeecceeecC--CCCCcHHHHHHHhhhhhcccchhHHhhcCccch-HHHHhcccccCCchhHHHHHHHHHhccccCEEE
Confidence 55666665433 3578999888765432 22 1224467778888 578899999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeC
Q 006442 567 LDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKG 615 (645)
Q Consensus 567 LDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~ 615 (645)
||||+++||.+.+-.+.++|+.+ ++|.++|-||+.++.-++||++++++
T Consensus 479 lDEPSA~LDvEqR~~vakvIRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~G 531 (591)
T COG1245 479 LDEPSAYLDVEQRIIVAKVIRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEG 531 (591)
T ss_pred ecCchhhccHHHHHHHHHHHHHHHhhcCceEEEEecceehhhhhhceEEEEec
Confidence 99999999999999888888865 46999999999999999999999973
No 40
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-50 Score=383.57 Aligned_cols=205 Identities=29% Similarity=0.424 Sum_probs=182.5
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------cc
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~ 491 (645)
++|+++|++++||+..+|+|||++|.+||+++|+||||||||||||||.++.+|++|+|.++|.++. .+
T Consensus 1 ~mi~i~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vG 80 (240)
T COG1126 1 MMIEIKNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVG 80 (240)
T ss_pred CeEEEEeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcC
Confidence 3699999999999999999999999999999999999999999999999999999999999997542 23
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhc-------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCe
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAE-------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~-------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 564 (645)
+++|+ .++++.+||.+|+..+.. ....+.+.++|+++|+ .+..+.+|.+|||||||||||||||+.+|++
T Consensus 81 mVFQ~--fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL-~~ka~~yP~qLSGGQqQRVAIARALaM~P~v 157 (240)
T COG1126 81 MVFQQ--FNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGL-ADKADAYPAQLSGGQQQRVAIARALAMDPKV 157 (240)
T ss_pred eeccc--ccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCc-hhhhhhCccccCcHHHHHHHHHHHHcCCCCE
Confidence 45554 679999999999987642 1223457889999999 5788999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 565 LlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
+|+|||||+|||+....+.+.+++. +-|.|+|||++.|+.+++|||++|++|++++. |+.++++..
T Consensus 158 mLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~-g~p~~~f~~ 226 (240)
T COG1126 158 MLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEE-GPPEEFFDN 226 (240)
T ss_pred EeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEe-cCHHHHhcC
Confidence 9999999999999999999988865 45999999999999999999999999999864 577777643
No 41
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.1e-49 Score=385.60 Aligned_cols=196 Identities=30% Similarity=0.427 Sum_probs=174.7
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----ceEEEEeccCc
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQEFE 171 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----~~i~~v~Q~~~ 171 (645)
.+.++++++.|++..+|+|+||+|.+||+++||||||||||||||+|+|+.+|++|+|.++|.. ..++||+|++.
T Consensus 3 ~l~i~~v~~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ~~~ 82 (248)
T COG1116 3 LLEIEGVSKSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQEDA 82 (248)
T ss_pred eEEEEeeEEEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEeccCc
Confidence 5899999999999999999999999999999999999999999999999999999999998753 47999999999
Q ss_pred cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcc
Q 006442 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (645)
Q Consensus 172 ~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (645)
+++..||+||+..+.... .....+.++++.++|+.+|+. .
T Consensus 83 LlPW~Tv~~NV~l~l~~~---------------------------------------~~~~~e~~~~a~~~L~~VgL~-~ 122 (248)
T COG1116 83 LLPWLTVLDNVALGLELR---------------------------------------GKSKAEARERAKELLELVGLA-G 122 (248)
T ss_pred ccchhhHHhhheehhhcc---------------------------------------ccchHhHHHHHHHHHHHcCCc-c
Confidence 999999999996443210 012223445778899999997 6
Q ss_pred cccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhhcCeEE
Q 006442 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQLCTKIV 327 (645)
Q Consensus 252 ~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~~~d~i~ 327 (645)
..++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.+.| ++.++|||+||||++++-.++|||+
T Consensus 123 ~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRiv 202 (248)
T COG1116 123 FEDKYPHQLSGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVV 202 (248)
T ss_pred hhhcCccccChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEE
Confidence 889999999999999999999999999999999999999999998887654 5678999999999999999999999
Q ss_pred EEcCc
Q 006442 328 ETEMG 332 (645)
Q Consensus 328 ~l~~G 332 (645)
+|.++
T Consensus 203 vl~~~ 207 (248)
T COG1116 203 VLSNR 207 (248)
T ss_pred EecCC
Confidence 99985
No 42
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=9.8e-49 Score=381.32 Aligned_cols=210 Identities=27% Similarity=0.417 Sum_probs=186.2
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCc----------eEEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAFL 166 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~----------~i~~v 166 (645)
+|+++|++|.|+++++++|+||+|++||+++++||+||||||+||+|.++++|++|+|.++|.+. +||||
T Consensus 1 MI~~~nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYv 80 (309)
T COG1125 1 MIEFENVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYV 80 (309)
T ss_pred CceeeeeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhh
Confidence 48999999999999999999999999999999999999999999999999999999999998643 69999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
-|...+++++||.|||...-. ....+...+++++.++|..+
T Consensus 81 iQqigLFPh~Tv~eNIa~VP~---------------------------------------L~~w~k~~i~~r~~ELl~lv 121 (309)
T COG1125 81 IQQIGLFPHLTVAENIATVPK---------------------------------------LLGWDKERIKKRADELLDLV 121 (309)
T ss_pred hhhcccCCCccHHHHHHhhhh---------------------------------------hcCCCHHHHHHHHHHHHHHh
Confidence 999999999999999963210 01123446678899999999
Q ss_pred CCCc-ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHh
Q 006442 247 GFTA-DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 247 gl~~-~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~ 321 (645)
|+++ ++.+|++++|||||+|||.+||||+.+|+||||||||++|||.++..|.+.+ ++.++|||+||||++++..
T Consensus 122 gL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~k 201 (309)
T COG1125 122 GLDPSEYADRYPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALK 201 (309)
T ss_pred CCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHh
Confidence 9976 5999999999999999999999999999999999999999999999998765 3579999999999999999
Q ss_pred hcCeEEEEcCceeEEeccChHHHHH
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQYVL 346 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~~~~ 346 (645)
++|||++|++|++..| ++....+.
T Consensus 202 Ladri~vm~~G~i~Q~-~~P~~il~ 225 (309)
T COG1125 202 LADRIAVMDAGEIVQY-DTPDEILA 225 (309)
T ss_pred hhceEEEecCCeEEEe-CCHHHHHh
Confidence 9999999999998655 44444443
No 43
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-47 Score=384.22 Aligned_cols=207 Identities=33% Similarity=0.537 Sum_probs=183.9
Q ss_pred cEEEEeEEEEeCC-----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------- 160 (645)
+|++++++|.|.. ..+|+||||+|++||++||||.+|||||||+|+|.++..|++|+|.++|.+
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 4899999999975 359999999999999999999999999999999999999999999999843
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
.+|||+||++.+....||++|+...+. ....+..+++++
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLe---------------------------------------iag~~k~ei~~R 121 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLE---------------------------------------LAGVPKAEIKQR 121 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHh---------------------------------------hcCCCHHHHHHH
Confidence 369999999999889999999963321 012345577889
Q ss_pred HHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEec
Q 006442 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISH 314 (645)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsH 314 (645)
+.++|+.+|++ +..++++.+|||||||||+|||||+.+|+|||.|||||+|||++.+.+.++|+ +.|.||++|||
T Consensus 122 V~elLelVgL~-dk~~~yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITH 200 (339)
T COG1135 122 VAELLELVGLS-DKADRYPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITH 200 (339)
T ss_pred HHHHHHHcCCh-hhhccCchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 99999999998 78999999999999999999999999999999999999999999999988874 47999999999
Q ss_pred CHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
.++.+.++|||+++|++|++. -.|...+.
T Consensus 201 Em~Vvk~ic~rVavm~~G~lv-E~G~v~~v 229 (339)
T COG1135 201 EMEVVKRICDRVAVLDQGRLV-EEGTVSEV 229 (339)
T ss_pred hHHHHHHHhhhheEeeCCEEE-EeccHHHh
Confidence 999999999999999999984 44554443
No 44
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.4e-47 Score=369.18 Aligned_cols=218 Identities=23% Similarity=0.406 Sum_probs=188.6
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCc-------------
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM------------- 161 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~------------- 161 (645)
.+.|++++++++|+++.+++||||+|++||+++|+||+|||||||||+|.|+++|++|+|.+.|.+.
T Consensus 6 ~~~I~vr~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 6 EPLIEVRGVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRK 85 (263)
T ss_pred cceEEEeeeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHh
Confidence 4579999999999999999999999999999999999999999999999999999999999988643
Q ss_pred eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHh
Q 006442 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (645)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (645)
++|+++|.-.+|.++||+||+...+.+. ..++...+++.+..
T Consensus 86 r~GvlFQ~gALFssltV~eNVafplre~--------------------------------------~~lp~~~i~~lv~~ 127 (263)
T COG1127 86 RMGVLFQQGALFSSLTVFENVAFPLREH--------------------------------------TKLPESLIRELVLM 127 (263)
T ss_pred heeEEeeccccccccchhHhhheehHhh--------------------------------------ccCCHHHHHHHHHH
Confidence 5999999999999999999996433221 12333345555666
Q ss_pred hchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHH
Q 006442 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRA 317 (645)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~ 317 (645)
-|+.+|+.....++.+.+|||||++|++||||++.+|++|++||||+||||.+...+.++++ +.|.|+|+||||++
T Consensus 128 KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~ 207 (263)
T COG1127 128 KLELVGLRGAAADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD 207 (263)
T ss_pred HHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH
Confidence 68889998777999999999999999999999999999999999999999999887776653 46999999999999
Q ss_pred HHHhhcCeEEEEcCceeEEeccChHHHHHHHHHH
Q 006442 318 FLDQLCTKIVETEMGVSRTYEGNYSQYVLEKAAW 351 (645)
Q Consensus 318 ~l~~~~d~i~~l~~G~~~~~~g~~~~~~~~~~~~ 351 (645)
.+..+||+|+++.+|++ .+.|+.++.......|
T Consensus 208 s~~~i~Drv~~L~~gkv-~~~Gt~~el~~sd~P~ 240 (263)
T COG1127 208 SLLTIADRVAVLADGKV-IAEGTPEELLASDDPW 240 (263)
T ss_pred HHHhhhceEEEEeCCEE-EEeCCHHHHHhCCCHH
Confidence 99999999999999998 6789887765544333
No 45
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-46 Score=375.72 Aligned_cols=212 Identities=27% Similarity=0.417 Sum_probs=176.9
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------ceEEEEec
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------MKIAFLSQ 168 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-------~~i~~v~Q 168 (645)
+.|+++|++++|++.++|+||||+|++|++++|+||||||||||+|+|+|+++|++|+|.+.+.+ .+||||||
T Consensus 3 ~~i~v~nl~v~y~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYVPQ 82 (254)
T COG1121 3 PMIEVENLTVSYGNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYVPQ 82 (254)
T ss_pred cEEEEeeeEEEECCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEcCc
Confidence 46999999999997689999999999999999999999999999999999999999999987653 47999999
Q ss_pred cCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 169 EFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 169 ~~~--~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
... ..+..||+|-+..+......... .... .-.+.+.++|+.+
T Consensus 83 ~~~~d~~fP~tV~d~V~~g~~~~~g~~~----------------------------------~~~~-~d~~~v~~aL~~V 127 (254)
T COG1121 83 KSSVDRSFPITVKDVVLLGRYGKKGWFR----------------------------------RLNK-KDKEKVDEALERV 127 (254)
T ss_pred ccccCCCCCcCHHHHHHccCcccccccc----------------------------------cccH-HHHHHHHHHHHHc
Confidence 653 33567999988643211100000 0111 1146788899999
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhc
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~ 323 (645)
|+. ++.++++.+|||||+|||.|||||+++|++|||||||+|+|+.++..+.++|+ +.|+||++||||+..+.++|
T Consensus 128 gm~-~~~~r~i~~LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~ 206 (254)
T COG1121 128 GME-DLRDRQIGELSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYF 206 (254)
T ss_pred Cch-hhhCCcccccCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhC
Confidence 997 79999999999999999999999999999999999999999999999988874 45999999999999999999
Q ss_pred CeEEEEcCceeEEeccChHHHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~~~ 345 (645)
|+|+.++... .+.|+..+..
T Consensus 207 D~vi~Ln~~~--~~~G~~~~~~ 226 (254)
T COG1121 207 DRVICLNRHL--IASGPPEEVL 226 (254)
T ss_pred CEEEEEcCee--EeccChhhcc
Confidence 9999997654 3567655543
No 46
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-46 Score=365.89 Aligned_cols=203 Identities=28% Similarity=0.473 Sum_probs=181.7
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cchh
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (645)
||+++||++.|+++.+++++||+|+.||+++++|||||||||+||+|.++++|++|+|.++|.++. .+|+
T Consensus 1 MI~~~nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYv 80 (309)
T COG1125 1 MIEFENVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYV 80 (309)
T ss_pred CceeeeeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhh
Confidence 589999999999999999999999999999999999999999999999999999999999998863 4677
Q ss_pred ccchhhcCCCCCCHHHHHHhhhc--cccH----HHHHHHHhhcCCCh-hhhccCcCcCCHhHHHHHHHHHHHccCCCeEE
Q 006442 494 EQNQAEALDLDKTVLETVAEAAE--DWRI----DDIKGLLGRCNFKA-DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~--~~~~----~~~~~~L~~~~l~~-~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 566 (645)
-|. ..++|.+||.+|+..... .|.. +++.++|+.+|+.+ ++.+++|++|||||||||.+||||+.+|+|||
T Consensus 81 iQq--igLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~ilL 158 (309)
T COG1125 81 IQQ--IGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADPPILL 158 (309)
T ss_pred hhh--cccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCeEe
Confidence 654 478999999999987543 3443 45788999999975 58899999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 567 LDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 567 LDEPt~~LD~~s~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||+++|||-++..+++.+.+ +++|||+||||++++..++|||.+|++|+++.+ +.+++++
T Consensus 159 MDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~-~~P~~il 224 (309)
T COG1125 159 MDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQY-DTPDEIL 224 (309)
T ss_pred ecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEe-CCHHHHH
Confidence 9999999999999999988764 578999999999999999999999999999976 4444443
No 47
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.6e-46 Score=375.08 Aligned_cols=210 Identities=27% Similarity=0.416 Sum_probs=178.0
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCc----------eEEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAFL 166 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~----------~i~~v 166 (645)
.++++|++++|+++++++|+||+|++|++++|+||||||||||||+|+|+++|.+|+|.++|.+. .+|||
T Consensus 2 ~L~~~~ls~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~v 81 (258)
T COG1120 2 MLEVENLSFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAYV 81 (258)
T ss_pred eeEEEEEEEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEEe
Confidence 48999999999999999999999999999999999999999999999999999999999998643 69999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
||.+...+..||+|-+..+-..... |. .....+-++.+.+.|+.+
T Consensus 82 pQ~~~~~~~~tV~d~V~~GR~p~~~---------------------------------~~--~~~~~~D~~~v~~aL~~~ 126 (258)
T COG1120 82 PQSPSAPFGLTVYELVLLGRYPHLG---------------------------------LF--GRPSKEDEEIVEEALELL 126 (258)
T ss_pred ccCCCCCCCcEEeehHhhcCCcccc---------------------------------cc--cCCCHhHHHHHHHHHHHh
Confidence 9999887889999988532110000 00 000111123567788899
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhh
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQL 322 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~ 322 (645)
|+. ++.+|++.+|||||||||.|||||+++|+||||||||++||......+.++++ +.|.|||+|.||++++.++
T Consensus 127 ~~~-~la~r~~~~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ry 205 (258)
T COG1120 127 GLE-HLADRPVDELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARY 205 (258)
T ss_pred CcH-HHhcCcccccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHh
Confidence 996 78999999999999999999999999999999999999999999988888764 4689999999999999999
Q ss_pred cCeEEEEcCceeEEeccChHH
Q 006442 323 CTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 323 ~d~i~~l~~G~~~~~~g~~~~ 343 (645)
||+++.|++|++. ..|...+
T Consensus 206 ad~~i~lk~G~i~-a~G~p~e 225 (258)
T COG1120 206 ADHLILLKDGKIV-AQGTPEE 225 (258)
T ss_pred CCEEEEEECCeEE-eecCcch
Confidence 9999999999984 5565443
No 48
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-46 Score=390.38 Aligned_cols=214 Identities=29% Similarity=0.440 Sum_probs=187.7
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEe
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLS 167 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~ 167 (645)
+.|+++|++++|++..+++|+||+|++||+++|+||||||||||||+|+|+..|++|+|.++|.+ ..||+|+
T Consensus 4 ~~l~i~~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~VF 83 (352)
T COG3842 4 PALEIRNVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMVF 83 (352)
T ss_pred ceEEEEeeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccceee
Confidence 46999999999999999999999999999999999999999999999999999999999998753 3699999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcC
Q 006442 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (645)
Q Consensus 168 Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (645)
|+..+|+.+||+|||..++... ......++.+++.++|+.++
T Consensus 84 Q~YALFPHltV~~NVafGLk~~--------------------------------------~~~~~~~i~~rv~e~L~lV~ 125 (352)
T COG3842 84 QSYALFPHMTVEENVAFGLKVR--------------------------------------KKLKKAEIKARVEEALELVG 125 (352)
T ss_pred cCcccCCCCcHHHHhhhhhhhc--------------------------------------CCCCHHHHHHHHHHHHHHcC
Confidence 9999999999999997543210 01122345678889999999
Q ss_pred CCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhhc
Q 006442 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~~~ 323 (645)
+. +..+|++.+|||||||||||||||+.+|++||||||+|+||..-+..+...| ++.|.|.|+||||.+++..++
T Consensus 126 L~-~~~~R~p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~ms 204 (352)
T COG3842 126 LE-GFADRKPHQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMS 204 (352)
T ss_pred ch-hhhhhChhhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhc
Confidence 97 6899999999999999999999999999999999999999999888776544 567999999999999999999
Q ss_pred CeEEEEcCceeEEeccChHHHHHHHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQYVLEKA 349 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~~~~~~~ 349 (645)
|||++|++|++ ...|+..+.|....
T Consensus 205 DrI~Vm~~G~I-~Q~gtP~eiY~~P~ 229 (352)
T COG3842 205 DRIAVMNDGRI-EQVGTPEEIYERPA 229 (352)
T ss_pred cceEEccCCce-eecCCHHHHhhCcc
Confidence 99999999998 45677777666543
No 49
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.3e-45 Score=363.13 Aligned_cols=197 Identities=28% Similarity=0.463 Sum_probs=169.6
Q ss_pred EEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------------
Q 006442 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------- 160 (645)
Q Consensus 98 i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------- 160 (645)
++++|+++.|+. ..+|+++||+|++||+++|+||+||||||||++|.|+.+|++|.|.++|.+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 679999999954 369999999999999999999999999999999999999999999998742
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..|||++|++.+.+.+||.||+.....- .........+++
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~---------------------------------------~~~~~~~~~~~~ 122 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLI---------------------------------------AGKSAGRRKRAA 122 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHH---------------------------------------cCCChhHHHHHH
Confidence 2599999999999999999999632110 001111234567
Q ss_pred HhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecC
Q 006442 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHD 315 (645)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd 315 (645)
.++++.+|+.....++++.+|||||||||||||||+.+|++||.||||.+||.++.+.+.++|+ +.|+|||+||||
T Consensus 123 ~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd 202 (226)
T COG1136 123 EELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHD 202 (226)
T ss_pred HHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 7888899997555558899999999999999999999999999999999999999999988874 458999999999
Q ss_pred HHHHHhhcCeEEEEcCcee
Q 006442 316 RAFLDQLCTKIVETEMGVS 334 (645)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~ 334 (645)
.+.+. .|||++.+.+|++
T Consensus 203 ~~lA~-~~dr~i~l~dG~~ 220 (226)
T COG1136 203 PELAK-YADRVIELKDGKI 220 (226)
T ss_pred HHHHH-hCCEEEEEeCCee
Confidence 99887 7999999999984
No 50
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-45 Score=368.48 Aligned_cols=205 Identities=31% Similarity=0.504 Sum_probs=180.5
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceec-------ccchhcc
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV-------LPNYFEQ 495 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~-------~~~~~~q 495 (645)
++|+++|+++.|+++++|+|+||+|++|++++|+||||||||||+|+|+|+++|.+|+|.+.|.++ ..+|++|
T Consensus 3 ~~i~v~nl~v~y~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYVPQ 82 (254)
T COG1121 3 PMIEVENLTVSYGNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYVPQ 82 (254)
T ss_pred cEEEEeeeEEEECCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEcCc
Confidence 469999999999866899999999999999999999999999999999999999999999988643 4689999
Q ss_pred chhhcCCCCCCHHHHHHhhhcc----------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeE
Q 006442 496 NQAEALDLDKTVLETVAEAAED----------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~~~----------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 565 (645)
.......+..||+|.+..+... ...+.+.++|+++|+. +..++++++|||||+|||.|||||+++|++|
T Consensus 83 ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-~~~~r~i~~LSGGQ~QRV~lARAL~~~p~ll 161 (254)
T COG1121 83 KSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-DLRDRQIGELSGGQKQRVLLARALAQNPDLL 161 (254)
T ss_pred ccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-hhhCCcccccCcHHHHHHHHHHHhccCCCEE
Confidence 7655667889999999986321 1236789999999994 8999999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 566 lLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
||||||+|+|+.++..+.++|.+. +.|||+||||+..+..+||+|+.|++.-+. .|+.++.++
T Consensus 162 lLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~~~~~--~G~~~~~~~ 227 (254)
T COG1121 162 LLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNRHLIA--SGPPEEVLT 227 (254)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcCeeEe--ccChhhccC
Confidence 999999999999999999999765 569999999999999999999999755443 466665543
No 51
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7.6e-46 Score=371.77 Aligned_cols=202 Identities=32% Similarity=0.518 Sum_probs=179.4
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cchh
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (645)
+++++|++++|+++++++|+||+|++||+++|+||||||||||||+|+|+++|.+|+|.++|.++. .+|+
T Consensus 2 ~L~~~~ls~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~v 81 (258)
T COG1120 2 MLEVENLSFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAYV 81 (258)
T ss_pred eeEEEEEEEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEEe
Confidence 589999999999999999999999999999999999999999999999999999999999998763 3577
Q ss_pred ccchhhcCCCCCCHHHHHHhhhc-------cccH---HHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCC
Q 006442 494 EQNQAEALDLDKTVLETVAEAAE-------DWRI---DDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~-------~~~~---~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 563 (645)
+|.. ...+..||+|.|..+.. .++. +.+..+|+.+|+ .++.++.+.+|||||||||.|||||+++|+
T Consensus 82 pQ~~--~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~-~~la~r~~~~LSGGerQrv~iArALaQ~~~ 158 (258)
T COG1120 82 PQSP--SAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGL-EHLADRPVDELSGGERQRVLIARALAQETP 158 (258)
T ss_pred ccCC--CCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCc-HHHhcCcccccChhHHHHHHHHHHHhcCCC
Confidence 7764 45578899999988742 1222 247788999999 588999999999999999999999999999
Q ss_pred eEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 564 LLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 564 lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+|+|||||++||+.++-.+++.++++ +.|||+|.||++.+.++||++++|++|++... |..++.+
T Consensus 159 iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~-G~p~evl 227 (258)
T COG1120 159 ILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQ-GTPEEVL 227 (258)
T ss_pred EEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEee-cCcchhc
Confidence 99999999999999999999999865 36999999999999999999999999999864 6655543
No 52
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.4e-46 Score=384.99 Aligned_cols=210 Identities=29% Similarity=0.433 Sum_probs=184.4
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEec
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQ 168 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~Q 168 (645)
.|+++|++|+|++..+++++||+|++||+++|+||||||||||||+|+|+.+|++|+|.++|.. ..||||||
T Consensus 3 ~i~l~~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVFQ 82 (338)
T COG3839 3 ELELKNVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVFQ 82 (338)
T ss_pred EEEEeeeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEeC
Confidence 5999999999988769999999999999999999999999999999999999999999998753 36999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++.+||+||+..+++. ..++..++++++++..+.|++
T Consensus 83 ~yALyPhmtV~~Niaf~Lk~---------------------------------------~~~~k~ei~~rV~eva~~L~l 123 (338)
T COG3839 83 NYALYPHMTVYENIAFGLKL---------------------------------------RGVPKAEIDKRVKEVAKLLGL 123 (338)
T ss_pred CccccCCCcHHHHhhhhhhh---------------------------------------CCCchHHHHHHHHHHHHHcCC
Confidence 99999999999999744321 123345677889999999999
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhhcC
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~~~d 324 (645)
. ++++|.+.+|||||||||||||||+.+|+++|||||+|+||+..+..+...+ ++.|.|+|+||||..++..++|
T Consensus 124 ~-~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtlad 202 (338)
T COG3839 124 E-HLLNRKPLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLAD 202 (338)
T ss_pred h-hHHhcCcccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCC
Confidence 7 7899999999999999999999999999999999999999999877776554 4578999999999999999999
Q ss_pred eEEEEcCceeEEeccChHHHHHH
Q 006442 325 KIVETEMGVSRTYEGNYSQYVLE 347 (645)
Q Consensus 325 ~i~~l~~G~~~~~~g~~~~~~~~ 347 (645)
||++|++|++. ..|...+.|.+
T Consensus 203 ri~Vm~~G~i~-Q~g~p~ely~~ 224 (338)
T COG3839 203 RIVVMNDGRIQ-QVGTPLELYER 224 (338)
T ss_pred EEEEEeCCeee-ecCChHHHhhC
Confidence 99999999984 44555555443
No 53
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-46 Score=364.76 Aligned_cols=191 Identities=36% Similarity=0.507 Sum_probs=172.2
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceec-----ccchhccch
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV-----LPNYFEQNQ 497 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~-----~~~~~~q~~ 497 (645)
.+++++++++.|++..+|+|+||+|.+||+++|+|||||||||||++|+|+.+|++|+|.++|..+ ..+|++|+
T Consensus 2 ~~l~i~~v~~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ~- 80 (248)
T COG1116 2 ALLEIEGVSKSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQE- 80 (248)
T ss_pred ceEEEEeeEEEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEecc-
Confidence 358999999999999999999999999999999999999999999999999999999999999865 23567765
Q ss_pred hhcCCCCCCHHHHHHhhhccc------cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCC
Q 006442 498 AEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (645)
Q Consensus 498 ~~~l~~~~tv~e~v~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt 571 (645)
+.+.+..||++||..+.... ..+.+.++|+.+|+. +..+++|++|||||||||+|||||+.+|+||+||||+
T Consensus 81 -~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~-~~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPF 158 (248)
T COG1116 81 -DALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLA-GFEDKYPHQLSGGMRQRVAIARALATRPKLLLLDEPF 158 (248)
T ss_pred -CcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCc-chhhcCccccChHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 46889999999998875431 234688999999994 7889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhCCEEEEEeCC
Q 006442 572 NHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGS 616 (645)
Q Consensus 572 ~~LD~~s~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~d~v~~l~~g 616 (645)
++||.-++..|++.+.+ .+.|||+||||.+++..++|||++|.++
T Consensus 159 gALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 159 GALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred chhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 99999999999987754 4679999999999999999999999983
No 54
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-46 Score=372.18 Aligned_cols=211 Identities=29% Similarity=0.453 Sum_probs=183.5
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCC-----------CceEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKS-----------NMKIAF 165 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~-----------~~~i~~ 165 (645)
+|.++|+++.|+...+++|||++|+.||.+||.||||||||||||+|+|+..|++|.|.+++. ..+|||
T Consensus 2 ~i~i~~~~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VGf 81 (345)
T COG1118 2 SIRINNVKKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVGF 81 (345)
T ss_pred ceeehhhhhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcceeE
Confidence 489999999999999999999999999999999999999999999999999999999999876 236999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
|+|++.+++.+||.+||..+..-. ....+...++.++.++|..
T Consensus 82 vFQ~YALF~HmtVa~NIAFGl~~~-------------------------------------~~~p~~~~~r~rv~elL~l 124 (345)
T COG1118 82 VFQHYALFPHMTVADNIAFGLKVR-------------------------------------KERPSEAEIRARVEELLRL 124 (345)
T ss_pred EEechhhcccchHHhhhhhccccc-------------------------------------ccCCChhhHHHHHHHHHHH
Confidence 999999999999999997543210 0012234567788889999
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHh
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~ 321 (645)
+.++ ...++++.+|||||||||||||||+.+|++||||||+++||+.-+..|..+| .+.|.|+|+||||.+++.+
T Consensus 125 vqL~-~la~ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ 203 (345)
T COG1118 125 VQLE-GLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALE 203 (345)
T ss_pred hccc-chhhcCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHh
Confidence 9986 6899999999999999999999999999999999999999999887777665 4569999999999999999
Q ss_pred hcCeEEEEcCceeEEeccChHHHHH
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQYVL 346 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~~~~ 346 (645)
+||||++|++|++. ..|+..+.+.
T Consensus 204 ladrvvvl~~G~Ie-qvg~p~ev~~ 227 (345)
T COG1118 204 LADRVVVLNQGRIE-QVGPPDEVYD 227 (345)
T ss_pred hcceEEEecCCeee-eeCCHHHHhc
Confidence 99999999999983 4566555443
No 55
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-45 Score=358.54 Aligned_cols=200 Identities=28% Similarity=0.499 Sum_probs=175.2
Q ss_pred ccEEEEeEEEEeCCee----eeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCC-----------C
Q 006442 96 SGVKLENISKSYKGVT----VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKS-----------N 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~----vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~-----------~ 160 (645)
++|+++|+++.|+... +|++|||+|.+||++||+|++|||||||+++|+|+.+|++|+|.++|. .
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~ 81 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFY 81 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhc
Confidence 4699999999998876 999999999999999999999999999999999999999999999984 2
Q ss_pred ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 ~~i~~v~Q~~~--~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
..|-+|||+|. +.+..||++-+...+.. ......+++
T Consensus 82 ~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~-----------------------------------------~~~~~~~~~ 120 (252)
T COG1124 82 RPVQMVFQDPYSSLNPRRTVGRILSEPLRP-----------------------------------------HGLSKSQQR 120 (252)
T ss_pred cceeEEecCCccccCcchhHHHHHhhhhcc-----------------------------------------CCccHHHHH
Confidence 35999999994 55667887766432210 111233455
Q ss_pred HHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEec
Q 006442 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISH 314 (645)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsH 314 (645)
+.++|+.+|+++..++|.+.+|||||+|||||||||..+|++||||||||+||+.....+.++|. +++.|.|+|||
T Consensus 121 i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsH 200 (252)
T COG1124 121 IAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISH 200 (252)
T ss_pred HHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeC
Confidence 88999999999999999999999999999999999999999999999999999999999988873 47899999999
Q ss_pred CHHHHHhhcCeEEEEcCceeEE
Q 006442 315 DRAFLDQLCTKIVETEMGVSRT 336 (645)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~ 336 (645)
|+..+..+||||++|++|.+..
T Consensus 201 dl~~v~~~cdRi~Vm~~G~ivE 222 (252)
T COG1124 201 DLALVEHMCDRIAVMDNGQIVE 222 (252)
T ss_pred cHHHHHHHhhheeeeeCCeEEE
Confidence 9999999999999999998743
No 56
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-45 Score=368.83 Aligned_cols=202 Identities=29% Similarity=0.408 Sum_probs=178.2
Q ss_pred EEEEEeeeeeeCC-----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------
Q 006442 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~-----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (645)
||++++|++.|+. ..+++|+||+|++||++||+|+||+|||||+|+|.++.+|++|+|.++|.++.
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 5899999999975 36899999999999999999999999999999999999999999999998763
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHc
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~ 559 (645)
.++++|+ .++..+.||++|+++.... ...+++.++|+.+|+. +..+++|.+|||||||||+|||||+
T Consensus 81 ~R~~IGMIFQh--FnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~-dk~~~yP~qLSGGQKQRVaIARALa 157 (339)
T COG1135 81 LRQKIGMIFQH--FNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLS-DKADRYPAQLSGGQKQRVAIARALA 157 (339)
T ss_pred HHhhccEEecc--ccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCCh-hhhccCchhcCcchhhHHHHHHHHh
Confidence 3455554 4677789999999986532 1235688999999995 8899999999999999999999999
Q ss_pred cCCCeEEeeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~s~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
.+|+|||+|||||+|||++.+.+.++|++ ++.||++|||.|+.+.++||||.+|++|++++. |.-.+.+
T Consensus 158 ~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~-G~v~~vF 230 (339)
T COG1135 158 NNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEE-GTVSEVF 230 (339)
T ss_pred cCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEe-ccHHHhh
Confidence 99999999999999999999999998874 466999999999999999999999999999974 5554444
No 57
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.4e-45 Score=353.87 Aligned_cols=206 Identities=31% Similarity=0.434 Sum_probs=181.3
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc------------
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------ 489 (645)
+++|++++|+++|+++.+++|+||+|++||+++|+|+||||||||||+|.|+++|++|+|.++|.++.
T Consensus 6 ~~~I~vr~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 6 EPLIEVRGVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRK 85 (263)
T ss_pred cceEEEeeeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHh
Confidence 56799999999999999999999999999999999999999999999999999999999999998863
Q ss_pred -cchhccchhhcCCCCCCHHHHHHhhhcc---ccH----HHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccC
Q 006442 490 -PNYFEQNQAEALDLDKTVLETVAEAAED---WRI----DDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (645)
Q Consensus 490 -~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~~~----~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~ 561 (645)
.++++| .-.++.++||+||+.+.... ... +-+..-|+.+|+.+...++.|++||||+++|++||||++.+
T Consensus 86 r~GvlFQ--~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAiald 163 (263)
T COG1127 86 RMGVLFQ--QGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIALD 163 (263)
T ss_pred heeEEee--ccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhcC
Confidence 123333 45688899999999875432 122 23556789999987778999999999999999999999999
Q ss_pred CCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 562 STLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 562 p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|+||++||||+||||-+...+.++|++. +.|+++||||++.+..+|||++++.+|++. +.|+.++..+
T Consensus 164 Pell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~-~~Gt~~el~~ 235 (263)
T COG1127 164 PELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVI-AEGTPEELLA 235 (263)
T ss_pred CCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEE-EeCCHHHHHh
Confidence 9999999999999999999998888754 569999999999999999999999999998 4688877653
No 58
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-45 Score=354.64 Aligned_cols=206 Identities=30% Similarity=0.515 Sum_probs=182.8
Q ss_pred cEEEEEeeeeeeCCee----ceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceeccc--------
Q 006442 423 SVVTIKNLEFGYEDRL----LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP-------- 490 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~----~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~-------- 490 (645)
.+|+++|+++.|+.+. ++++|||+|.+||++||+|++|||||||.++|+|+.+|++|+|.++|.++.+
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~ 81 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFY 81 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhc
Confidence 4799999999998776 9999999999999999999999999999999999999999999999975533
Q ss_pred ---chhccchhhcCCCCCCHHHHHHhhhcc----ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCC
Q 006442 491 ---NYFEQNQAEALDLDKTVLETVAEAAED----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (645)
Q Consensus 491 ---~~~~q~~~~~l~~~~tv~e~v~~~~~~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 563 (645)
.+++|++...+.|..||.+.+...... ...+++.++|+.+|+.....++.|.+|||||+|||||||||..+|+
T Consensus 82 ~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~Pk 161 (252)
T COG1124 82 RPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEPK 161 (252)
T ss_pred cceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCCC
Confidence 246777777889999999999876532 2234589999999999999999999999999999999999999999
Q ss_pred eEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 564 LLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 564 lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+||||||||+||...+..+.+++.+. +-|+|+||||+..+..+||||++|++|++++. ++-.+.+
T Consensus 162 lLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~-~~~~~l~ 230 (252)
T COG1124 162 LLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEI-GPTEELL 230 (252)
T ss_pred EEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEe-echhhhh
Confidence 99999999999999999999988653 55999999999999999999999999999974 4444433
No 59
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-44 Score=349.33 Aligned_cols=215 Identities=24% Similarity=0.417 Sum_probs=181.2
Q ss_pred ccEEEEeEEEEe-CCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------------c
Q 006442 96 SGVKLENISKSY-KGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------M 161 (645)
Q Consensus 96 ~~i~i~nls~~y-~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-------------~ 161 (645)
.+|+++|+++.| +++.+|+||||+|++||+++|||+||||||||||+|.|+.+|++|+|.++|.. .
T Consensus 2 ~~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 2 MMIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred ceEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 369999999999 66789999999999999999999999999999999999999999999998742 2
Q ss_pred eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHh
Q 006442 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (645)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (645)
+|||++|.+.+.+..||.+|++.+.......+ ...+ .+...+-...+-+
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~------~slf-------------------------glfsk~dk~~Al~ 130 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTW------RSLF-------------------------GLFSKEDKAQALD 130 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHH------HHHh-------------------------CCCCHHHHHHHHH
Confidence 69999999999999999999975432211100 0000 0111122345567
Q ss_pred hchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHH
Q 006442 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRA 317 (645)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~ 317 (645)
.|+.+|+. +...+...+|||||+|||+|||||+++|+++|.|||+++|||.+.+.+.+.|+ +.|.|||+..|+++
T Consensus 131 aLervgi~-~~A~qra~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vd 209 (258)
T COG3638 131 ALERVGIL-DKAYQRASTLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVD 209 (258)
T ss_pred HHHHcCcH-HHHHHHhccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHH
Confidence 78999997 56667789999999999999999999999999999999999999999988875 47999999999999
Q ss_pred HHHhhcCeEEEEcCceeEEeccChHH
Q 006442 318 FLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 318 ~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
.+.++||||+-|++|++ .|+|..++
T Consensus 210 lA~~Y~~Riigl~~G~i-vfDg~~~e 234 (258)
T COG3638 210 LAKKYADRIIGLKAGRI-VFDGPASE 234 (258)
T ss_pred HHHHHHhhheEecCCcE-EEeCChhh
Confidence 99999999999999998 78888654
No 60
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.1e-44 Score=338.91 Aligned_cols=201 Identities=27% Similarity=0.466 Sum_probs=178.6
Q ss_pred cEEEEeEEEEeCCee-eeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------------ce
Q 006442 97 GVKLENISKSYKGVT-VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MK 162 (645)
Q Consensus 97 ~i~i~nls~~y~~~~-vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-------------~~ 162 (645)
+|+++||+|.|++-+ +|+||||+|++||++.|+||+|||||||||+|++..+|++|+|++++.+ .+
T Consensus 1 mI~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 1 MIRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred CeeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 489999999996545 9999999999999999999999999999999999999999999998753 36
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
||+|+|++.+.+..||+||+..++. ....+..++++++.++
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~---------------------------------------v~G~~~~~i~~rV~~~ 121 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLR---------------------------------------VIGKPPREIRRRVSEV 121 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhh---------------------------------------ccCCCHHHHHHHHHHH
Confidence 9999999999999999999864321 0123455678889999
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFL 319 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L---~~~g~tvIivsHd~~~l 319 (645)
|+.+|+. +..+..+.+|||||||||+||||++.+|++||.||||-+|||.....+.+++ .+.|.||||+|||.+.+
T Consensus 122 L~~VgL~-~k~~~lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv 200 (223)
T COG2884 122 LDLVGLK-HKARALPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELV 200 (223)
T ss_pred HHHhccc-hhhhcCccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHH
Confidence 9999997 5677789999999999999999999999999999999999999988887765 56799999999999999
Q ss_pred HhhcCeEEEEcCceeEEe
Q 006442 320 DQLCTKIVETEMGVSRTY 337 (645)
Q Consensus 320 ~~~~d~i~~l~~G~~~~~ 337 (645)
+++-.|++.+++|++..+
T Consensus 201 ~~~~~rvl~l~~Grl~~d 218 (223)
T COG2884 201 NRMRHRVLALEDGRLVRD 218 (223)
T ss_pred HhccCcEEEEeCCEEEec
Confidence 999999999999998544
No 61
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=9e-44 Score=373.69 Aligned_cols=207 Identities=28% Similarity=0.441 Sum_probs=178.4
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEE
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFL 166 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v 166 (645)
.+|+++|++|+|++..+|+||||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.+ ..|||+
T Consensus 6 ~~i~i~~l~k~~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~v 85 (306)
T PRK13537 6 APIDFRNVEKRYGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGVV 85 (306)
T ss_pred ceEEEEeEEEEECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEEE
Confidence 46999999999998889999999999999999999999999999999999999999999998753 359999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.+++.+|++||+... ... ...+..+...++.++++.+
T Consensus 86 ~q~~~~~~~~tv~e~l~~~-~~~--------------------------------------~~~~~~~~~~~~~~~l~~~ 126 (306)
T PRK13537 86 PQFDNLDPDFTVRENLLVF-GRY--------------------------------------FGLSAAAARALVPPLLEFA 126 (306)
T ss_pred eccCcCCCCCcHHHHHHHH-HHH--------------------------------------cCCCHHHHHHHHHHHHHHc
Confidence 9999988889999998521 000 0011122344566788888
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhc
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~ 323 (645)
++. +..++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .|+|||++||+++++..+|
T Consensus 127 ~l~-~~~~~~~~~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~ 205 (306)
T PRK13537 127 KLE-NKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLC 205 (306)
T ss_pred CCc-hHhcCchhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhC
Confidence 986 577889999999999999999999999999999999999999999999988753 5899999999999999999
Q ss_pred CeEEEEcCceeEEeccChHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~ 343 (645)
|+|+++++|++ .+.|+.++
T Consensus 206 d~i~il~~G~i-~~~g~~~~ 224 (306)
T PRK13537 206 DRLCVIEEGRK-IAEGAPHA 224 (306)
T ss_pred CEEEEEECCEE-EEECCHHH
Confidence 99999999998 46676544
No 62
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-44 Score=357.84 Aligned_cols=208 Identities=28% Similarity=0.455 Sum_probs=181.2
Q ss_pred ccEEEEeEEEEeCCe-eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceE
Q 006442 96 SGVKLENISKSYKGV-TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKI 163 (645)
Q Consensus 96 ~~i~i~nls~~y~~~-~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i 163 (645)
+++.++|++|+|++. .+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. .+|
T Consensus 2 ~~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 2 RMIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred ceEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 358999999999776 89999999999999999999999999999999999999999999988753 359
Q ss_pred EEEeccCccC-CCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 164 AFLSQEFEVS-MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 164 ~~v~Q~~~~~-~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
|||+|+|..+ +..||.+++..+..+ ..++..++++++.+.
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n---------------------------------------~g~~~~e~~~rv~~~ 122 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLEN---------------------------------------LGLPREEIEERVAEA 122 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhh---------------------------------------cCCCHHHHHHHHHHH
Confidence 9999999654 467999998643211 123444577889999
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~ 318 (645)
+..+|+. +..++++.+|||||||||+||.+|+.+|++|||||||++||+.+++.+.+++++ .|+|||++|||+++
T Consensus 123 l~~vgl~-~~~~r~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~ 201 (235)
T COG1122 123 LELVGLE-ELLDRPPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLEL 201 (235)
T ss_pred HHHcCch-hhccCCccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHH
Confidence 9999997 579999999999999999999999999999999999999999999999887743 37899999999999
Q ss_pred HHhhcCeEEEEcCceeEEeccChHHH
Q 006442 319 LDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+..+||+++++++|++ .+.|...++
T Consensus 202 ~~~~ad~v~vl~~G~i-~~~g~p~~i 226 (235)
T COG1122 202 VLEYADRVVVLDDGKI-LADGDPAEI 226 (235)
T ss_pred HHhhCCEEEEEECCEE-eecCCHHHH
Confidence 9999999999999998 566765443
No 63
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=6e-43 Score=408.38 Aligned_cols=338 Identities=23% Similarity=0.304 Sum_probs=239.7
Q ss_pred cHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCC--CEEEEeCCCCCCCHHHHHHHHHHHc---cCCCe
Q 006442 234 TLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDP--DLLLLDEPTNHLDLDTIEWLEGYLG---KQDVP 308 (645)
Q Consensus 234 ~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p--~iLLLDEPts~LD~~~~~~l~~~L~---~~g~t 308 (645)
++..++. .|..+|+..-..++++.+|||||+|||+||+||+.+| ++|||||||+|||+..++.|.++|+ +.|.|
T Consensus 465 ~i~~rl~-~L~~vGL~~l~l~r~~~~LSgGE~QRv~LA~aL~~~~~~~llILDEPtagLd~~~~~~L~~~L~~L~~~G~T 543 (943)
T PRK00349 465 EIRERLK-FLVDVGLDYLTLSRSAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNDRLIETLKHLRDLGNT 543 (943)
T ss_pred HHHHHHH-HhhccccCCCCCCCchhhCCHHHHHHHHHHHHHhhCCCCcEEEecCCccCCCHHHHHHHHHHHHHHHhCCCE
Confidence 3445554 6888999632379999999999999999999999997 9999999999999999999988764 56999
Q ss_pred EEEEecCHHHHHhhcCeEEEE------cCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCch
Q 006442 309 MVIISHDRAFLDQLCTKIVET------EMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANS 382 (645)
Q Consensus 309 vIivsHd~~~l~~~~d~i~~l------~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 382 (645)
||+|+||++++. .||+|++| ++|++ .+.|++.++...... + .... +..
T Consensus 544 VIvVeH~~~~i~-~aD~vi~LgpgaG~~~G~i-v~~g~~~e~~~~~~~---------------l--~~~~---l~~---- 597 (943)
T PRK00349 544 LIVVEHDEDTIR-AADYIVDIGPGAGVHGGEV-VASGTPEEIMKNPNS---------------L--TGQY---LSG---- 597 (943)
T ss_pred EEEEeCCHHHHH-hCCEEEEeccccCCCCCEE-eeccCHHHHhcChhh---------------e--eehh---hcc----
Confidence 999999999987 59999999 77776 566776543221000 0 0000 000
Q ss_pred hhHHHHHHHHHHHHHhhhhcccccccceEEeccCCCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCc
Q 006442 383 GRASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCG 462 (645)
Q Consensus 383 ~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsG 462 (645)
+ .....+.. + .....+.|+++|++. ..|+++||+|+.|++++|+|+||||
T Consensus 598 -~--------------~~~~~~~~--------~--~~~~~~~L~v~~l~~-----~~L~~isl~Ip~GeivgVtGvsGSG 647 (943)
T PRK00349 598 -K--------------KKIEVPKE--------R--RKGNGKFLKLKGARE-----NNLKNVDVEIPLGKFTCVTGVSGSG 647 (943)
T ss_pred -c--------------cccccccc--------c--cCCCcceEEecCCcc-----CCcCceEEEEeCCCEEEEEcCCCCC
Confidence 0 00000000 0 011234689999872 3599999999999999999999999
Q ss_pred HHHHHHHHH---------cCCCCCee------------EEEECceecc--------------------------------
Q 006442 463 KSTLLKLIM---------GLEKPRGG------------EVLLGEHNVL-------------------------------- 489 (645)
Q Consensus 463 KSTLl~~l~---------g~~~p~~G------------~i~~~g~~~~-------------------------------- 489 (645)
||||++.+. +...+..+ .|.++..++.
T Consensus 648 KSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~ 727 (943)
T PRK00349 648 KSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGY 727 (943)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCceEEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCC
Confidence 999999764 11111111 1223221110
Q ss_pred -cchhccch------------------------------------------------hhcCCCCCCHHHHHHhhhccccH
Q 006442 490 -PNYFEQNQ------------------------------------------------AEALDLDKTVLETVAEAAEDWRI 520 (645)
Q Consensus 490 -~~~~~q~~------------------------------------------------~~~l~~~~tv~e~v~~~~~~~~~ 520 (645)
++.|..|. ...-..++|+.|++.+.......
T Consensus 728 ~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i 807 (943)
T PRK00349 728 KPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKI 807 (943)
T ss_pred CcccCCCCCCCCCCCcccccceEEEEeccCCCccccCccccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhh
Confidence 00111110 00001135666666554332233
Q ss_pred HHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCC---CeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEE
Q 006442 521 DDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPS---TLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVI 594 (645)
Q Consensus 521 ~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p---~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi 594 (645)
....+.|..+|+.....++++.+||||||||+.||++|+.+| +++||||||+|||+..+..+.+.|.++ +.|||
T Consensus 808 ~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVI 887 (943)
T PRK00349 808 ARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVV 887 (943)
T ss_pred hHHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 445678999999533468999999999999999999999999 999999999999999999999998865 46999
Q ss_pred EEecCHHHHHhhCCEEEEE------eCCeEEeeCCChhHHHH
Q 006442 595 TVSHDRYFVKQIVNRVVEV------KGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 595 ~vsHd~~~i~~~~d~v~~l------~~g~i~~~~~~~~~~~~ 630 (645)
+||||++++. .||+|+.| ++|+++. .|..+++.+
T Consensus 888 iitH~~~~i~-~aD~ii~Lgp~~G~~~G~Iv~-~Gt~~el~~ 927 (943)
T PRK00349 888 VIEHNLDVIK-TADWIIDLGPEGGDGGGEIVA-TGTPEEVAK 927 (943)
T ss_pred EEecCHHHHH-hCCEEEEecCCcCCCCCEEEE-eCCHHHHHh
Confidence 9999999986 69999999 6899884 577777654
No 64
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=9.3e-44 Score=377.24 Aligned_cols=207 Identities=28% Similarity=0.456 Sum_probs=177.8
Q ss_pred cEEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------------
Q 006442 97 GVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (645)
Q Consensus 97 ~i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------ 160 (645)
+|+++|++|+|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 4899999999952 469999999999999999999999999999999999999999999998742
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
.+|+|++|++.+++..||+||+...... ...+....++++
T Consensus 81 r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~---------------------------------------~~~~~~~~~~~v 121 (343)
T TIGR02314 81 RRQIGMIFQHFNLLSSRTVFGNVALPLEL---------------------------------------DNTPKDEIKRKV 121 (343)
T ss_pred hcCEEEEECCccccccCcHHHHHHHHHHH---------------------------------------cCCCHHHHHHHH
Confidence 2599999999988889999998532110 001122344567
Q ss_pred HhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 006442 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (645)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd 315 (645)
.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.++..+.++|++ .|.|||+|||+
T Consensus 122 ~e~l~~vgL~-~~~~~~~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~ 200 (343)
T TIGR02314 122 TELLALVGLG-DKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHE 200 (343)
T ss_pred HHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 7889999996 678999999999999999999999999999999999999999999999888753 48999999999
Q ss_pred HHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
++.+.++||+|++|++|++. ..|+..++
T Consensus 201 ~~~v~~~~d~v~vl~~G~iv-~~g~~~~v 228 (343)
T TIGR02314 201 MDVVKRICDCVAVISNGELI-EQGTVSEI 228 (343)
T ss_pred HHHHHHhCCEEEEEECCEEE-EEcCHHHH
Confidence 99999999999999999984 55665544
No 65
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=8.6e-44 Score=356.10 Aligned_cols=197 Identities=26% Similarity=0.444 Sum_probs=168.5
Q ss_pred cEEEEeEEEEeCC--eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------------c
Q 006442 97 GVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------M 161 (645)
Q Consensus 97 ~i~i~nls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-------------~ 161 (645)
+|+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ .
T Consensus 1 ~l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 1 MIRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred CeEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 3789999999964 469999999999999999999999999999999999999999999998642 2
Q ss_pred eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHh
Q 006442 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (645)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (645)
.++|++|++.+++..||.||+...... . .......++++.+
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~~ 121 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRI---------------I------------------------GVPPRDANERVSA 121 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHH
Confidence 599999999887888999998532100 0 0011122345667
Q ss_pred hchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHH
Q 006442 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAF 318 (645)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~ 318 (645)
+++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||+||||+++
T Consensus 122 ~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~ 200 (216)
T TIGR00960 122 ALEKVGLE-GKAHALPMQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINL 200 (216)
T ss_pred HHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 88888986 567888999999999999999999999999999999999999999999988753 48999999999999
Q ss_pred HHhhcCeEEEEcCce
Q 006442 319 LDQLCTKIVETEMGV 333 (645)
Q Consensus 319 l~~~~d~i~~l~~G~ 333 (645)
+..+||+++++++|+
T Consensus 201 ~~~~~d~i~~l~~G~ 215 (216)
T TIGR00960 201 VETYRHRTLTLSRGR 215 (216)
T ss_pred HHHhCCEEEEEeCCc
Confidence 999999999999886
No 66
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-44 Score=374.82 Aligned_cols=203 Identities=29% Similarity=0.471 Sum_probs=180.6
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchh
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYF 493 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~ 493 (645)
.+.|+++||++.|++..+++|+||+|++||+++|+||||||||||||+|+|+..|++|+|.++|.++. .+++
T Consensus 3 ~~~l~i~~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~V 82 (352)
T COG3842 3 KPALEIRNVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMV 82 (352)
T ss_pred CceEEEEeeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhccccee
Confidence 34699999999999999999999999999999999999999999999999999999999999999873 2456
Q ss_pred ccchhhcCCCCCCHHHHHHhhhc-cc------cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEE
Q 006442 494 EQNQAEALDLDKTVLETVAEAAE-DW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~-~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 566 (645)
+|+ ..++|.+||.+||.++.. .+ ..+++.++|+.+++. +..+++|++|||||||||||||||+.+|++||
T Consensus 83 FQ~--YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~-~~~~R~p~qLSGGQqQRVALARAL~~~P~vLL 159 (352)
T COG3842 83 FQS--YALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLE-GFADRKPHQLSGGQQQRVALARALVPEPKVLL 159 (352)
T ss_pred ecC--cccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCch-hhhhhChhhhChHHHHHHHHHHHhhcCcchhh
Confidence 654 679999999999999865 11 124688999999994 68899999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHH
Q 006442 567 LDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQV 628 (645)
Q Consensus 567 LDEPt~~LD~~s~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~ 628 (645)
||||.|+||..-+..|+..+++ .+.|.|+||||.+++..++|||++|++|+|... |.++++
T Consensus 160 LDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~-gtP~ei 224 (352)
T COG3842 160 LDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQV-GTPEEI 224 (352)
T ss_pred hcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeec-CCHHHH
Confidence 9999999999999988877764 467999999999999999999999999999865 444443
No 67
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-43 Score=377.91 Aligned_cols=208 Identities=26% Similarity=0.401 Sum_probs=179.7
Q ss_pred cEEEEeEEEEe-CCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEe
Q 006442 97 GVKLENISKSY-KGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLS 167 (645)
Q Consensus 97 ~i~i~nls~~y-~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~ 167 (645)
+|+++|++++| ++..+|+|+||+|++|++++|+|||||||||||++|+|+.+|++|+|.++|.. ..||||+
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~ 82 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVF 82 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 58999999999 77789999999999999999999999999999999999999999999998753 3599999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcC
Q 006442 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (645)
Q Consensus 168 Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (645)
|++.+++.+||+||+...+.. ...+..+..+++.++++.+|
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~~~g 123 (356)
T PRK11650 83 QNYALYPHMSVRENMAYGLKI---------------------------------------RGMPKAEIEERVAEAARILE 123 (356)
T ss_pred CCccccCCCCHHHHHHhHHhh---------------------------------------cCCCHHHHHHHHHHHHHHcC
Confidence 999998999999998643210 00111233456778889999
Q ss_pred CCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhc
Q 006442 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~ 323 (645)
+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|+ +.|.|+|+||||.+++..+|
T Consensus 124 L~-~~~~~~~~~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~ 202 (356)
T PRK11650 124 LE-PLLDRKPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLA 202 (356)
T ss_pred Ch-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhC
Confidence 96 68899999999999999999999999999999999999999999999887764 35899999999999999999
Q ss_pred CeEEEEcCceeEEeccChHHHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~~~ 345 (645)
|+|++|++|++. ..|...+.+
T Consensus 203 D~i~vl~~G~i~-~~g~~~~~~ 223 (356)
T PRK11650 203 DRVVVMNGGVAE-QIGTPVEVY 223 (356)
T ss_pred CEEEEEeCCEEE-EECCHHHHH
Confidence 999999999984 456655543
No 68
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-43 Score=358.53 Aligned_cols=206 Identities=29% Similarity=0.435 Sum_probs=174.0
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------------ceEE
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MKIA 164 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-------------~~i~ 164 (645)
|+++|++++|++.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i~ 80 (235)
T cd03261 1 IELRGLTKSFGGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRMG 80 (235)
T ss_pred CeEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcceE
Confidence 478999999998889999999999999999999999999999999999999999999987632 2499
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
|++|++.+++..||.||+....... ...+.....+++.++++
T Consensus 81 ~v~q~~~~~~~~tv~~~l~~~~~~~--------------------------------------~~~~~~~~~~~~~~~l~ 122 (235)
T cd03261 81 MLFQSGALFDSLTVFENVAFPLREH--------------------------------------TRLSEEEIREIVLEKLE 122 (235)
T ss_pred EEccCcccCCCCcHHHHHHHHHhhc--------------------------------------cCCCHHHHHHHHHHHHH
Confidence 9999998878889999985321000 00011122345667788
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHH
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLD 320 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~ 320 (645)
.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|||+||||++++.
T Consensus 123 ~~~l~-~~~~~~~~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~ 201 (235)
T cd03261 123 AVGLR-GAEDLYPAELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAF 201 (235)
T ss_pred HcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHH
Confidence 88986 566888999999999999999999999999999999999999999999988753 4899999999999999
Q ss_pred hhcCeEEEEcCceeEEeccChHH
Q 006442 321 QLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
.+||+|+++++|++ .+.|+.++
T Consensus 202 ~~~d~v~~l~~G~i-~~~g~~~~ 223 (235)
T cd03261 202 AIADRIAVLYDGKI-VAEGTPEE 223 (235)
T ss_pred HhcCEEEEEECCeE-EEecCHHH
Confidence 99999999999997 35566544
No 69
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-43 Score=375.99 Aligned_cols=209 Identities=24% Similarity=0.386 Sum_probs=181.0
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEe
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLS 167 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~ 167 (645)
+.|+++|++++|++..+|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.. ..|+||+
T Consensus 5 ~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~vf 84 (351)
T PRK11432 5 NFVVLKNITKRFGSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMVF 84 (351)
T ss_pred cEEEEEeEEEEECCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 46999999999998889999999999999999999999999999999999999999999998742 3699999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcC
Q 006442 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (645)
Q Consensus 168 Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (645)
|++.+++.+||+||+...+.. ...+..+..+++.++++.+|
T Consensus 85 Q~~~lfp~~tv~eNi~~~l~~---------------------------------------~~~~~~~~~~~v~~~l~~~g 125 (351)
T PRK11432 85 QSYALFPHMSLGENVGYGLKM---------------------------------------LGVPKEERKQRVKEALELVD 125 (351)
T ss_pred CCcccCCCCCHHHHHHHHHhH---------------------------------------cCCCHHHHHHHHHHHHHHcC
Confidence 999999999999998643210 00112233456778888899
Q ss_pred CCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhc
Q 006442 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~ 323 (645)
+. +..++++.+|||||||||+|||||+.+|++|||||||++||+..++++.+.|+ +.|.|+|+||||.+++..+|
T Consensus 126 l~-~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~la 204 (351)
T PRK11432 126 LA-GFEDRYVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVS 204 (351)
T ss_pred Cc-hhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhC
Confidence 96 57899999999999999999999999999999999999999999999987764 35899999999999999999
Q ss_pred CeEEEEcCceeEEeccChHHHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~~~ 345 (645)
|+|++|++|++. ..|+..+.+
T Consensus 205 D~i~vm~~G~i~-~~g~~~~~~ 225 (351)
T PRK11432 205 DTVIVMNKGKIM-QIGSPQELY 225 (351)
T ss_pred CEEEEEECCEEE-EEcCHHHHH
Confidence 999999999984 456655543
No 70
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.8e-44 Score=344.89 Aligned_cols=205 Identities=28% Similarity=0.419 Sum_probs=180.3
Q ss_pred cEEEEEeeeeee-CCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc------------
Q 006442 423 SVVTIKNLEFGY-EDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (645)
Q Consensus 423 ~~i~~~~v~~~y-~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------ 489 (645)
.+|+++||++.| +++.+|++|||+|++||+++|+|+||||||||||+|.|+.+|++|+|.++|.++.
T Consensus 2 ~~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 2 MMIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred ceEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 479999999999 5788999999999999999999999999999999999999999999999997652
Q ss_pred -cchhccchhhcCCCCCCHHHHHHhhhc-----------cc---cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHH
Q 006442 490 -PNYFEQNQAEALDLDKTVLETVAEAAE-----------DW---RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAF 554 (645)
Q Consensus 490 -~~~~~q~~~~~l~~~~tv~e~v~~~~~-----------~~---~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~l 554 (645)
.++++| ..++.+..+|++|+..+.- .+ ....+.++|+++|+ .+...++.++|||||||||+|
T Consensus 82 ~iGmIfQ--~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi-~~~A~qra~~LSGGQQQRVaI 158 (258)
T COG3638 82 DIGMIFQ--QFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGI-LDKAYQRASTLSGGQQQRVAI 158 (258)
T ss_pred hceeEec--cCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCc-HHHHHHHhccCCcchhHHHHH
Confidence 244554 4578899999999987631 11 23457889999999 577889999999999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
||||+++|+|+|.|||+++|||.+.+.+++.|++. +.|||+..|+++++.+|||||+-|++|+++ |.|+..+..+
T Consensus 159 ARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~iv-fDg~~~el~~ 237 (258)
T COG3638 159 ARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIV-FDGPASELTD 237 (258)
T ss_pred HHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEE-EeCChhhhhH
Confidence 99999999999999999999999999999999753 569999999999999999999999999998 5788766543
Q ss_pred H
Q 006442 631 L 631 (645)
Q Consensus 631 ~ 631 (645)
.
T Consensus 238 ~ 238 (258)
T COG3638 238 E 238 (258)
T ss_pred H
Confidence 3
No 71
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-43 Score=353.14 Aligned_cols=198 Identities=32% Similarity=0.470 Sum_probs=169.9
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEecc
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (645)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++|+
T Consensus 1 l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q~ 80 (213)
T cd03259 1 LELKGLSKTYGSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQD 80 (213)
T ss_pred CeeeeeEEEeCCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcCc
Confidence 478999999988889999999999999999999999999999999999999999999997642 259999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCC
Q 006442 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (645)
Q Consensus 170 ~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (645)
+.+++..|++||+....... ........+++.++++.+|+.
T Consensus 81 ~~~~~~~tv~~~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~l~~~~l~ 121 (213)
T cd03259 81 YALFPHLTVAENIAFGLKLR---------------------------------------GVPKAEIRARVRELLELVGLE 121 (213)
T ss_pred hhhccCCcHHHHHHhHHHHc---------------------------------------CCCHHHHHHHHHHHHHHcCCh
Confidence 98877889999985321100 000111234456778888986
Q ss_pred cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 006442 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (645)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ 325 (645)
+..++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .|.|||++|||++++.++||+
T Consensus 122 -~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~ 200 (213)
T cd03259 122 -GLLNRYPHELSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADR 200 (213)
T ss_pred -hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCE
Confidence 567888999999999999999999999999999999999999999999988753 489999999999999999999
Q ss_pred EEEEcCceeE
Q 006442 326 IVETEMGVSR 335 (645)
Q Consensus 326 i~~l~~G~~~ 335 (645)
|+++++|++.
T Consensus 201 v~~l~~G~i~ 210 (213)
T cd03259 201 IAVMNEGRIV 210 (213)
T ss_pred EEEEECCEEE
Confidence 9999999873
No 72
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.9e-43 Score=374.82 Aligned_cols=208 Identities=29% Similarity=0.455 Sum_probs=180.8
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEec
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQ 168 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~Q 168 (645)
+|+++|++++|++..+|+|+||+|++|++++|+|||||||||||++|+|+.+|++|+|.++|.. ..|+||+|
T Consensus 4 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~Q 83 (353)
T TIGR03265 4 YLSIDNIRKRFGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVFQ 83 (353)
T ss_pred EEEEEEEEEEeCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEeC
Confidence 5999999999998889999999999999999999999999999999999999999999998743 35999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++.+||+||+...+.. ...+..+..+++.++++.+|+
T Consensus 84 ~~~lfp~~tv~eNi~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~~l~L 124 (353)
T TIGR03265 84 SYALFPNLTVADNIAYGLKN---------------------------------------RGMGRAEVAERVAELLDLVGL 124 (353)
T ss_pred CcccCCCCcHHHHHHHHHHh---------------------------------------cCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999998643210 001122335567788999999
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcC
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~d 324 (645)
. +..++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.+.|+ +.+.|+|+||||.+++..+||
T Consensus 125 ~-~~~~~~~~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d 203 (353)
T TIGR03265 125 P-GSERKYPGQLSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMAD 203 (353)
T ss_pred C-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCC
Confidence 6 68899999999999999999999999999999999999999999999988764 358999999999999999999
Q ss_pred eEEEEcCceeEEeccChHHHH
Q 006442 325 KIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 325 ~i~~l~~G~~~~~~g~~~~~~ 345 (645)
+|++|++|++. ..|+..+.+
T Consensus 204 ~i~vl~~G~i~-~~g~~~~~~ 223 (353)
T TIGR03265 204 RIVVMNHGVIE-QVGTPQEIY 223 (353)
T ss_pred EEEEEECCEEE-EEcCHHHHH
Confidence 99999999984 456655544
No 73
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=6.8e-43 Score=371.13 Aligned_cols=209 Identities=28% Similarity=0.442 Sum_probs=178.2
Q ss_pred CCccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEE
Q 006442 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIA 164 (645)
Q Consensus 94 ~~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~ 164 (645)
...+|+++|++++|++..+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.+ ..||
T Consensus 38 ~~~~i~i~nl~k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ig 117 (340)
T PRK13536 38 STVAIDLAGVSKSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARARIG 117 (340)
T ss_pred CceeEEEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhccEE
Confidence 3457999999999999899999999999999999999999999999999999999999999998753 3599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
|++|++.+++.+|+.||+... ... . ........+++.++++
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~-~~~--------------~------------------------~~~~~~~~~~~~~ll~ 158 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVF-GRY--------------F------------------------GMSTREIEAVIPSLLE 158 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHH-HHH--------------c------------------------CCCHHHHHHHHHHHHH
Confidence 999999888899999998521 000 0 0011122334566778
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHh
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~ 321 (645)
.+|+. +..++++.+||||||||++||+||+.+|++|||||||+|||+.++.++.++|++ .|+|||++||+++++.+
T Consensus 159 ~~~L~-~~~~~~~~~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~ 237 (340)
T PRK13536 159 FARLE-SKADARVSDLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAER 237 (340)
T ss_pred HcCCc-hhhCCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHH
Confidence 88886 567889999999999999999999999999999999999999999999988753 58999999999999999
Q ss_pred hcCeEEEEcCceeEEeccChHH
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+||+|+++++|++ .+.|+.++
T Consensus 238 ~~d~i~il~~G~i-~~~g~~~~ 258 (340)
T PRK13536 238 LCDRLCVLEAGRK-IAEGRPHA 258 (340)
T ss_pred hCCEEEEEECCEE-EEEcCHHH
Confidence 9999999999998 45666544
No 74
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-43 Score=367.06 Aligned_cols=202 Identities=30% Similarity=0.473 Sum_probs=179.1
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhcc
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQ 495 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~q 495 (645)
.|+++||++.|++..+++++||+|+.||+++|+||||||||||||+|+|+.+|++|+|.++|.++. .++++|
T Consensus 3 ~i~l~~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVFQ 82 (338)
T COG3839 3 ELELKNVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVFQ 82 (338)
T ss_pred EEEEeeeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEeC
Confidence 589999999998765999999999999999999999999999999999999999999999998763 245565
Q ss_pred chhhcCCCCCCHHHHHHhhhccc------cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeC
Q 006442 496 NQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 569 (645)
+ +.++|.+||++|+.++.... ...++++.++.+++ .++++++|.+|||||||||||||||+++|+++||||
T Consensus 83 ~--yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l-~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~DE 159 (338)
T COG3839 83 N--YALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGL-EHLLNRKPLQLSGGQRQRVALARALVRKPKVFLLDE 159 (338)
T ss_pred C--ccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCC-hhHHhcCcccCChhhHHHHHHHHHHhcCCCEEEecC
Confidence 5 57899999999999876432 24568889999999 588999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHH
Q 006442 570 PTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQV 628 (645)
Q Consensus 570 Pt~~LD~~s~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~ 628 (645)
|+|+||...+..+...|++ ++.|+|.||||..+++..+|||++|++|+|.....+.+-|
T Consensus 160 PlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely 222 (338)
T COG3839 160 PLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELY 222 (338)
T ss_pred chhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHh
Confidence 9999999999888877764 4679999999999999999999999999998754444443
No 75
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-44 Score=336.07 Aligned_cols=208 Identities=30% Similarity=0.491 Sum_probs=182.5
Q ss_pred cEEEEeEEEEeCCee-eeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEE
Q 006442 97 GVKLENISKSYKGVT-VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFL 166 (645)
Q Consensus 97 ~i~i~nls~~y~~~~-vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v 166 (645)
+|++.+++++|++.. +++||||++++|+++||+|+|||||||+||+|++++.|++|+|++++.+ .+||.+
T Consensus 1 Ml~v~~l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGVl 80 (245)
T COG4555 1 MLEVTDLTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGVL 80 (245)
T ss_pred CeeeeehhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhccee
Confidence 488999999999865 9999999999999999999999999999999999999999999998753 369999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+-+..++..+|++||+.+ |... ..+...+++++++++.+.|
T Consensus 81 ~~e~glY~RlT~rEnl~~-Fa~L--------------------------------------~~l~~~~~kari~~l~k~l 121 (245)
T COG4555 81 FGERGLYARLTARENLKY-FARL--------------------------------------NGLSRKEIKARIAELSKRL 121 (245)
T ss_pred cCCcChhhhhhHHHHHHH-HHHH--------------------------------------hhhhhhHHHHHHHHHHHHh
Confidence 988888899999999863 2211 0122335677888889999
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHHHhhc
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L---~~~g~tvIivsHd~~~l~~~~ 323 (645)
++. +..|+.+.+||-||||||+|||||+++|++|+|||||||||..++..+.+++ ++.|++||++||+++++..+|
T Consensus 122 ~l~-~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealC 200 (245)
T COG4555 122 QLL-EYLDRRVGEFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALC 200 (245)
T ss_pred ChH-HHHHHHHhhhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhh
Confidence 986 6889999999999999999999999999999999999999999999998876 456999999999999999999
Q ss_pred CeEEEEcCceeEEeccChHHHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~~~ 345 (645)
|+|+++..|.+ .+.|+..+..
T Consensus 201 Drvivlh~Gev-v~~gs~~~l~ 221 (245)
T COG4555 201 DRVIVLHKGEV-VLEGSIEALD 221 (245)
T ss_pred heEEEEecCcE-EEcCCHHHHH
Confidence 99999999998 6788866543
No 76
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4e-43 Score=345.59 Aligned_cols=193 Identities=35% Similarity=0.514 Sum_probs=167.0
Q ss_pred EEEEEeeeeeeCC----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------
Q 006442 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (645)
+++++||++.|+. ..+|+++||+|++||+++|+|||||||||||++|.|+.+|++|.|.++|.++.
T Consensus 1 ~i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~ 80 (226)
T COG1136 1 MIELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKL 80 (226)
T ss_pred CcEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHH
Confidence 3689999999963 36899999999999999999999999999999999999999999999998763
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhc----c--ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHc
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAE----D--WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~----~--~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~ 559 (645)
.++++|+ .++.+.+|+.|||..... . .....+..+++.+|+.....+++|.+|||||||||||||||+
T Consensus 81 R~~~iGfvFQ~--~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~ 158 (226)
T COG1136 81 RRKKIGFVFQN--FNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALI 158 (226)
T ss_pred HHHhEEEECcc--CCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHh
Confidence 2455554 578899999999986421 1 124457788999999645555889999999999999999999
Q ss_pred cCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEE
Q 006442 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQ 619 (645)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~ 619 (645)
.+|+|++.||||.+||.++.+.+.+++.+. +.|||+||||...+. +|||++.|.+|++.
T Consensus 159 ~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~-~~dr~i~l~dG~~~ 221 (226)
T COG1136 159 NNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAK-YADRVIELKDGKIE 221 (226)
T ss_pred cCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHH-hCCEEEEEeCCeee
Confidence 999999999999999999999999998765 459999999998886 69999999999954
No 77
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.4e-43 Score=364.75 Aligned_cols=206 Identities=31% Similarity=0.511 Sum_probs=177.6
Q ss_pred cEEEEeEEEEeC-CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEE
Q 006442 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFL 166 (645)
Q Consensus 97 ~i~i~nls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v 166 (645)
.++++|++++|+ ++.+|+||||+|++|+++||+||||||||||+|+|+|+++|++|+|.++|.+ .+|||+
T Consensus 4 ~i~~~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~igy~ 83 (293)
T COG1131 4 VIEVRNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIGYV 83 (293)
T ss_pred eeeecceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheEEE
Confidence 488999999999 6899999999999999999999999999999999999999999999998742 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.+++.+|++||+..... +. .......+++++++++.+
T Consensus 84 ~~~~~~~~~lT~~e~l~~~~~---------------l~------------------------~~~~~~~~~~~~~~l~~~ 124 (293)
T COG1131 84 PQEPSLYPELTVRENLEFFAR---------------LY------------------------GLSKEEAEERIEELLELF 124 (293)
T ss_pred ccCCCCCccccHHHHHHHHHH---------------Hh------------------------CCChhHHHHHHHHHHHHc
Confidence 999999999999999852100 00 001112345788899999
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCC-CeEEEEecCHHHHHhh
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQD-VPMVIISHDRAFLDQL 322 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g-~tvIivsHd~~~l~~~ 322 (645)
|+.. ..++++.+||+|||||++||+||+.+|++|||||||+||||.++..+.++|+ +.| +||+++||.++++..+
T Consensus 125 ~L~~-~~~~~~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~ 203 (293)
T COG1131 125 GLED-KANKKVRTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEEL 203 (293)
T ss_pred CCch-hhCcchhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHh
Confidence 9975 4578899999999999999999999999999999999999999999998875 345 7999999999999999
Q ss_pred cCeEEEEcCceeEEeccChHH
Q 006442 323 CTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 323 ~d~i~~l~~G~~~~~~g~~~~ 343 (645)
||+|+++++|++ .+.|...+
T Consensus 204 ~d~v~il~~G~~-~~~g~~~~ 223 (293)
T COG1131 204 CDRVIILNDGKI-IAEGTPEE 223 (293)
T ss_pred CCEEEEEeCCEE-EEeCCHHH
Confidence 999999999998 45565544
No 78
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-43 Score=353.61 Aligned_cols=206 Identities=34% Similarity=0.506 Sum_probs=183.3
Q ss_pred cEEEEEeeeeeeCCe-eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------c
Q 006442 423 SVVTIKNLEFGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------P 490 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~-~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~ 490 (645)
.+++++++++.|++. .+++++||+|++||+++|+|+||||||||+++|.|+++|++|.|.++|.++. .
T Consensus 2 ~~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 2 RMIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred ceEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 468999999999875 8999999999999999999999999999999999999999999999997643 4
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhccc------cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCe
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 564 (645)
+++.|+++.++ +..||.+.++++.... ...++.++|..+|+. +..++++++||||||||||||.+|+.+|++
T Consensus 82 G~VfQnpd~q~-~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~-~~~~r~p~~LSGGqkqRvaIA~vLa~~P~i 159 (235)
T COG1122 82 GLVFQNPDDQL-FGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLE-ELLDRPPFNLSGGQKQRVAIAGVLAMGPEI 159 (235)
T ss_pred EEEEECccccc-ccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCch-hhccCCccccCCcceeeHHhhHHHHcCCCE
Confidence 68889886655 6789999999875321 234578899999995 678999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 565 LlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
|||||||++||+.+++.+.+.++++ +.|||+||||++++..+|||+++|++|+++. .|+..++++.
T Consensus 160 liLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~-~g~p~~i~~~ 229 (235)
T COG1122 160 LLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILA-DGDPAEIFND 229 (235)
T ss_pred EEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEee-cCCHHHHhhh
Confidence 9999999999999999999999875 3599999999999999999999999999974 5776666654
No 79
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-43 Score=350.82 Aligned_cols=198 Identities=28% Similarity=0.476 Sum_probs=170.7
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEEec
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v~Q 168 (645)
|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++|
T Consensus 1 i~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (220)
T cd03265 1 IEVENLVKKYGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVFQ 80 (220)
T ss_pred CEEEEEEEEECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEecC
Confidence 578999999998889999999999999999999999999999999999999999999998642 25999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++..|+++|+...... . ........+++.++++.+|+
T Consensus 81 ~~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l 121 (220)
T cd03265 81 DLSVDDELTGWENLYIHARL---------------Y------------------------GVPGAERRERIDELLDFVGL 121 (220)
T ss_pred CccccccCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHHHHcCC
Confidence 99887788999998531100 0 00111233456778888898
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcC
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d 324 (645)
. +..++++.+||||||||++|||||+.+|++|||||||++||+.+++.+.++|++ .++|||++|||++++..+||
T Consensus 122 ~-~~~~~~~~~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d 200 (220)
T cd03265 122 L-EAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCD 200 (220)
T ss_pred H-HHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC
Confidence 6 567888999999999999999999999999999999999999999999887743 48899999999999999999
Q ss_pred eEEEEcCceeE
Q 006442 325 KIVETEMGVSR 335 (645)
Q Consensus 325 ~i~~l~~G~~~ 335 (645)
+++++++|++.
T Consensus 201 ~i~~l~~G~i~ 211 (220)
T cd03265 201 RVAIIDHGRII 211 (220)
T ss_pred EEEEEeCCEEE
Confidence 99999999984
No 80
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=3.4e-42 Score=401.40 Aligned_cols=328 Identities=24% Similarity=0.323 Sum_probs=229.6
Q ss_pred hchhcCCCcccccccCCCCChHHHHHHHHHHHHccCC--CEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCH
Q 006442 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDP--DLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDR 316 (645)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p--~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~ 316 (645)
.|..+|+.....++++.+|||||+|||+||++|+.+| ++|||||||+|||+..+..|.++|+ +.|.|||+|+||+
T Consensus 470 ~L~~vgL~~l~l~r~~~tLSGGE~QRv~LA~aL~~~~~~~llILDEPtagLD~~~~~~L~~~L~~L~~~G~TVIvVeHd~ 549 (924)
T TIGR00630 470 FLIDVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLINTLKRLRDLGNTVIVVEHDE 549 (924)
T ss_pred hHhhccccccccCCCcCcCCHHHHHHHHHHHHHhhCCCCcEEEEcCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3677888532368999999999999999999999986 8999999999999999999988764 4689999999999
Q ss_pred HHHHhhcCeEEEE------cCceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHH
Q 006442 317 AFLDQLCTKIVET------EMGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEK 390 (645)
Q Consensus 317 ~~l~~~~d~i~~l------~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 390 (645)
+++. .||+|++| ++|++ .+.|+..++..... ... .. .+. +.
T Consensus 550 ~~i~-~aD~vi~LgpgaG~~~G~I-v~~g~~~el~~~~~---------------~lt--~~---~l~-----~~------ 596 (924)
T TIGR00630 550 ETIR-AADYVIDIGPGAGIHGGEV-VASGTPEEILANPD---------------SLT--GQ---YLS-----GK------ 596 (924)
T ss_pred HHHh-hCCEEEEecccccCCCCEE-eeccCHHHHhcCch---------------hee--ee---ccc-----cc------
Confidence 9997 89999999 77776 45565443211100 000 00 000 00
Q ss_pred HHHHHHHhhhhcccccccceEEeccCCCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHH
Q 006442 391 KLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLI 470 (645)
Q Consensus 391 ~l~rl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l 470 (645)
.....+ + .........|+++|++. ..|+++||+|+.|++++|+|+||||||||++-.
T Consensus 597 --------~~~~~~---~-------~~~~~~~~~l~l~~~~~-----~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~ 653 (924)
T TIGR00630 597 --------KKIEVP---K-------ERRPGNGKFLTLKGARE-----NNLKNITVSIPLGLFTCITGVSGSGKSTLINDT 653 (924)
T ss_pred --------cccccc---c-------cccCCCcceEEEEeCcc-----CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHH
Confidence 000000 0 00011234799999873 359999999999999999999999999999833
Q ss_pred H---------c-CCCCC-----ee------EEEECceecc---------------------------------cchhccc
Q 006442 471 M---------G-LEKPR-----GG------EVLLGEHNVL---------------------------------PNYFEQN 496 (645)
Q Consensus 471 ~---------g-~~~p~-----~G------~i~~~g~~~~---------------------------------~~~~~q~ 496 (645)
. + ..+|. .| .|.+|..++. ++.|..|
T Consensus 654 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN 733 (924)
T TIGR00630 654 LYPALARRLNGAKTQPGRYKSIEGLEHLDKVIHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFN 733 (924)
T ss_pred HHHHHHHHhcccccCCCCcCccccccCCCceEEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCC
Confidence 2 1 10110 11 2444432210 0111111
Q ss_pred hh-------------------------------------h-----------cCCCCCCHHHHHHhhhccccHHHHHHHHh
Q 006442 497 QA-------------------------------------E-----------ALDLDKTVLETVAEAAEDWRIDDIKGLLG 528 (645)
Q Consensus 497 ~~-------------------------------------~-----------~l~~~~tv~e~v~~~~~~~~~~~~~~~L~ 528 (645)
.. + .-..++|+.|.+.+........+....|.
T Consensus 734 ~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~ 813 (924)
T TIGR00630 734 VKGGRCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLC 813 (924)
T ss_pred CCCCCCCCCccceEEEEEccCCCCcccCCCCcCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHH
Confidence 00 0 00123444544444322222334567888
Q ss_pred hcCCChhhhccCcCcCCHhHHHHHHHHHHHcc---CCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHH
Q 006442 529 RCNFKADMLDRKVSLLSGGEKARLAFCKFMVK---PSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYF 602 (645)
Q Consensus 529 ~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~---~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~ 602 (645)
.+|+.....++++.+|||||+||++||++|+. +|+++||||||+|||+.++..+.+.|.++ +.|||+|+||+++
T Consensus 814 ~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~ 893 (924)
T TIGR00630 814 DVGLGYIKLGQPATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDV 893 (924)
T ss_pred HcCCCchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 89995334689999999999999999999997 59999999999999999999999999865 5699999999999
Q ss_pred HHhhCCEEEEE------eCCeEEeeCCChhH
Q 006442 603 VKQIVNRVVEV------KGSNLQDYAGDYNQ 627 (645)
Q Consensus 603 i~~~~d~v~~l------~~g~i~~~~~~~~~ 627 (645)
+. .||++++| ++|+++. .|..++
T Consensus 894 i~-~aD~ii~Lgp~~G~~gG~iv~-~G~~~~ 922 (924)
T TIGR00630 894 IK-TADYIIDLGPEGGDGGGTIVA-SGTPEE 922 (924)
T ss_pred HH-hCCEEEEecCCccCCCCEEEE-eCCHHH
Confidence 85 59999999 6899984 566554
No 81
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7.3e-43 Score=374.65 Aligned_cols=212 Identities=26% Similarity=0.399 Sum_probs=182.1
Q ss_pred CCccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEE
Q 006442 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAF 165 (645)
Q Consensus 94 ~~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~ 165 (645)
..+.|+++|++++|++.++|+++||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.. ..|+|
T Consensus 11 ~~~~L~l~~l~~~~~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 90 (375)
T PRK09452 11 LSPLVELRGISKSFDGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNT 90 (375)
T ss_pred CCceEEEEEEEEEECCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 4557999999999998889999999999999999999999999999999999999999999998753 35999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.+++.+||+||+..++.. ...+..+..+++.++++.
T Consensus 91 vfQ~~~lfp~ltv~eNi~~~l~~---------------------------------------~~~~~~~~~~~~~~~l~~ 131 (375)
T PRK09452 91 VFQSYALFPHMTVFENVAFGLRM---------------------------------------QKTPAAEITPRVMEALRM 131 (375)
T ss_pred EecCcccCCCCCHHHHHHHHHhh---------------------------------------cCCCHHHHHHHHHHHHHH
Confidence 99999999999999998643210 001112334567788888
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHh
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~ 321 (645)
+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+..++.+.+.|+ +.|.|+|+||||.+++..
T Consensus 132 ~~l~-~~~~~~p~~LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~ 210 (375)
T PRK09452 132 VQLE-EFAQRKPHQLSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALT 210 (375)
T ss_pred cCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 9996 68899999999999999999999999999999999999999999999988764 358999999999999999
Q ss_pred hcCeEEEEcCceeEEeccChHHHHH
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQYVL 346 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~~~~ 346 (645)
+||+|++|++|++. ..|...+.+.
T Consensus 211 laDri~vl~~G~i~-~~g~~~~i~~ 234 (375)
T PRK09452 211 MSDRIVVMRDGRIE-QDGTPREIYE 234 (375)
T ss_pred hCCEEEEEECCEEE-EEcCHHHHHh
Confidence 99999999999984 4466555443
No 82
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-42 Score=373.14 Aligned_cols=211 Identities=24% Similarity=0.400 Sum_probs=181.2
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEE
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFL 166 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v 166 (645)
.++|+++|++++|++..+|+|+||+|++|++++|+|||||||||||++|+|+.+|++|+|.++|.. ..|||+
T Consensus 17 ~~~l~l~~v~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~v 96 (377)
T PRK11607 17 TPLLEIRNLTKSFDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINMM 96 (377)
T ss_pred CceEEEEeEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 456999999999998889999999999999999999999999999999999999999999998753 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.+++.+||.||+...+... ..+..+..+++.++++.+
T Consensus 97 fQ~~~lfp~ltv~eNi~~~l~~~---------------------------------------~~~~~~~~~~v~~~l~~l 137 (377)
T PRK11607 97 FQSYALFPHMTVEQNIAFGLKQD---------------------------------------KLPKAEIASRVNEMLGLV 137 (377)
T ss_pred eCCCccCCCCCHHHHHHHHHHHc---------------------------------------CCCHHHHHHHHHHHHHHc
Confidence 99999999999999986432100 011223345677888999
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhh
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQL 322 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~~ 322 (645)
|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+..++++.+.| ++.|.|+|+||||.+++..+
T Consensus 138 ~L~-~~~~~~~~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l 216 (377)
T PRK11607 138 HMQ-EFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTM 216 (377)
T ss_pred CCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHh
Confidence 996 6789999999999999999999999999999999999999999998887544 45689999999999999999
Q ss_pred cCeEEEEcCceeEEeccChHHHHH
Q 006442 323 CTKIVETEMGVSRTYEGNYSQYVL 346 (645)
Q Consensus 323 ~d~i~~l~~G~~~~~~g~~~~~~~ 346 (645)
||+|++|++|++. ..|...+.+.
T Consensus 217 aDri~vl~~G~i~-~~g~~~~~~~ 239 (377)
T PRK11607 217 AGRIAIMNRGKFV-QIGEPEEIYE 239 (377)
T ss_pred CCEEEEEeCCEEE-EEcCHHHHHh
Confidence 9999999999984 4566555443
No 83
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-43 Score=353.98 Aligned_cols=203 Identities=28% Similarity=0.418 Sum_probs=180.0
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECce---ec--------ccch
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH---NV--------LPNY 492 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~---~~--------~~~~ 492 (645)
+|+++|+++.|+...+++++|+.|+.||.+|+.|||||||||||++|+|++.|++|+|.++|. |. ..++
T Consensus 2 ~i~i~~~~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VGf 81 (345)
T COG1118 2 SIRINNVKKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVGF 81 (345)
T ss_pred ceeehhhhhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcceeE
Confidence 488999999999999999999999999999999999999999999999999999999999998 43 2466
Q ss_pred hccchhhcCCCCCCHHHHHHhhhcc--------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCe
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAED--------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~~--------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 564 (645)
+.|+ +.+++.+||.+||+++... ....++.++|+.+.+ .++.+++|.+|||||||||||||||+.+|++
T Consensus 82 vFQ~--YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL-~~la~ryP~QLSGGQrQRVALARALA~eP~v 158 (345)
T COG1118 82 VFQH--YALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQL-EGLADRYPAQLSGGQRQRVALARALAVEPKV 158 (345)
T ss_pred EEec--hhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcc-cchhhcCchhcChHHHHHHHHHHHhhcCCCe
Confidence 6765 4588999999999998631 223467888999999 5789999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 565 LVLDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 565 LlLDEPt~~LD~~s~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
||||||+++||..-+..|.+.|++ ++.|+|+||||.+++.++||||++|++|+|... |+.++...
T Consensus 159 LLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqv-g~p~ev~~ 227 (345)
T COG1118 159 LLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQV-GPPDEVYD 227 (345)
T ss_pred EeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeee-CCHHHHhc
Confidence 999999999999999988888765 467999999999999999999999999999864 66666543
No 84
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=8.9e-43 Score=366.25 Aligned_cols=206 Identities=28% Similarity=0.430 Sum_probs=175.0
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEEe
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLS 167 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v~ 167 (645)
+|+++|++++|++..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++
T Consensus 4 ~i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~v~ 83 (303)
T TIGR01288 4 AIDLVGVSKSYGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGVVP 83 (303)
T ss_pred EEEEEeEEEEeCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEEEe
Confidence 5999999999998889999999999999999999999999999999999999999999998642 3599999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcC
Q 006442 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (645)
Q Consensus 168 Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (645)
|++.+++..|+.||+.... .. . ..+......++.++++.+|
T Consensus 84 q~~~~~~~~tv~e~l~~~~-~~--------------~------------------------~~~~~~~~~~~~~ll~~~~ 124 (303)
T TIGR01288 84 QFDNLDPEFTVRENLLVFG-RY--------------F------------------------GMSTREIEAVIPSLLEFAR 124 (303)
T ss_pred ccccCCcCCcHHHHHHHHH-HH--------------c------------------------CCCHHHHHHHHHHHHHHCC
Confidence 9998878899999985210 00 0 0011122334556778888
Q ss_pred CCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcC
Q 006442 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d 324 (645)
+. +..++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .|.|||++|||++++..+||
T Consensus 125 l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d 203 (303)
T TIGR01288 125 LE-SKADVRVALLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCD 203 (303)
T ss_pred Ch-hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCC
Confidence 86 567888999999999999999999999999999999999999999999988753 58999999999999999999
Q ss_pred eEEEEcCceeEEeccChHH
Q 006442 325 KIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 325 ~i~~l~~G~~~~~~g~~~~ 343 (645)
+|+++++|++ .+.|+.++
T Consensus 204 ~i~~l~~G~i-~~~g~~~~ 221 (303)
T TIGR01288 204 RLCVLESGRK-IAEGRPHA 221 (303)
T ss_pred EEEEEECCEE-EEEcCHHH
Confidence 9999999997 35565443
No 85
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=5.9e-42 Score=414.52 Aligned_cols=328 Identities=23% Similarity=0.297 Sum_probs=232.0
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCC--CEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDP--DLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRA 317 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p--~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~ 317 (645)
|..+|+.....++++.+|||||+|||+||+||..+| ++|||||||+|||+..++.|.++|+ +.|.|||+||||++
T Consensus 460 L~~vGL~~L~ldR~~~tLSGGE~QRV~LAraL~~~p~g~lLILDEPTagLD~~~~~~L~~lL~~L~~~G~TVIvVeHd~~ 539 (1809)
T PRK00635 460 LIDLGLPYLTPERALATLSGGEQERTALAKHLGAELIGITYILDEPSIGLHPQDTHKLINVIKKLRDQGNTVLLVEHDEQ 539 (1809)
T ss_pred HHhccccCCCCCCchhhCCHHHHHHHHHHHHHhcCCCCcEEEEECCccCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH
Confidence 457788632368999999999999999999999999 8999999999999999999988764 46899999999999
Q ss_pred HHHhhcCeEEEEc------CceeEEeccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHH
Q 006442 318 FLDQLCTKIVETE------MGVSRTYEGNYSQYVLEKAAWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKK 391 (645)
Q Consensus 318 ~l~~~~d~i~~l~------~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 391 (645)
+.++||+|++|. +|++ .+.|+++++...... + .... +...
T Consensus 540 -vi~~aDrVi~L~pGag~~gG~I-v~~G~~~eil~~~~~---------------l--~~~~---l~~~------------ 585 (1809)
T PRK00635 540 -MISLADRIIDIGPGAGIFGGEV-LFNGSPREFLAKSDS---------------L--TAKY---LRQE------------ 585 (1809)
T ss_pred -HHHhCCEEEEEcCCcccCCCEE-EEecCHHHHhhChHH---------------H--HHHH---hcCc------------
Confidence 458999999997 4454 456665544221100 0 0000 0000
Q ss_pred HHHHHHhhhhcccccccceEEeccCCCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHH---
Q 006442 392 LERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLK--- 468 (645)
Q Consensus 392 l~rl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~--- 468 (645)
.....+ .........|++++++. ..|+++||+|+.||+++|+|+||||||||++
T Consensus 586 -------~~~~~~-----------~~~~~~~~~L~l~~~~~-----~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L 642 (1809)
T PRK00635 586 -------LTIPIP-----------EKRTNSLGTLTLSKATK-----HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTL 642 (1809)
T ss_pred -------ccccCc-----------ccccCCCCeEEEecccc-----CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHH
Confidence 000000 00001223689999873 3699999999999999999999999999999
Q ss_pred ------HHHcCCCCCee----E----EEECceec------------------c---------------cchhccch----
Q 006442 469 ------LIMGLEKPRGG----E----VLLGEHNV------------------L---------------PNYFEQNQ---- 497 (645)
Q Consensus 469 ------~l~g~~~p~~G----~----i~~~g~~~------------------~---------------~~~~~q~~---- 497 (645)
.|.|...+..+ . |.+|..++ + ...|..|.
T Consensus 643 ~~~l~~~l~~~~~~~~~i~g~~i~~vi~idQspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~ 722 (1809)
T PRK00635 643 VPAVEEFIEQGFCSNLSIQWGAISRLVHITRDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGA 722 (1809)
T ss_pred HHHHHHHhcCCCcccccccccccceeEEecCCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCC
Confidence 55565332111 1 22221111 0 00011010
Q ss_pred ---------------h------------------hcCCCCCCHHHHHHhhhccc--------cHHHHHHHHhhcCCChhh
Q 006442 498 ---------------A------------------EALDLDKTVLETVAEAAEDW--------RIDDIKGLLGRCNFKADM 536 (645)
Q Consensus 498 ---------------~------------------~~l~~~~tv~e~v~~~~~~~--------~~~~~~~~L~~~~l~~~~ 536 (645)
+ +......|+.|++.+..... ...+....|+.+|+. +.
T Consensus 723 C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l~~L~~vGL~-~l 801 (1809)
T PRK00635 723 CAECQGLGSITTTDNRTSIPCPSCLGKRFLPQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIHALCSLGLD-YL 801 (1809)
T ss_pred CCcceeeEEEEEecCCceEECCccCCcccCHHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHHHHHHHcCCc-ch
Confidence 0 01123467778776543211 112222578889994 44
Q ss_pred -hccCcCcCCHhHHHHHHHHHHHc---cCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCE
Q 006442 537 -LDRKVSLLSGGEKARLAFCKFMV---KPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNR 609 (645)
Q Consensus 537 -~~~~~~~LSgGqkqrv~lAral~---~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~ 609 (645)
.++++.+|||||||||+||++|+ .+|++|||||||+|||+.+.+.+.++|.++ +.|||+||||++++ .+||+
T Consensus 802 ~l~q~~~tLSGGE~QRV~LAraL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i-~~aDr 880 (1809)
T PRK00635 802 PLGRPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVV-KVADY 880 (1809)
T ss_pred hhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HhCCE
Confidence 68999999999999999999997 699999999999999999999999999764 56999999999999 78999
Q ss_pred EEEEe------CCeEEeeCCChhHHHH
Q 006442 610 VVEVK------GSNLQDYAGDYNQVQS 630 (645)
Q Consensus 610 v~~l~------~g~i~~~~~~~~~~~~ 630 (645)
+++|. +|+++. .|..+++..
T Consensus 881 Vi~L~p~gg~~~G~iv~-~Gtpeel~~ 906 (1809)
T PRK00635 881 VLELGPEGGNLGGYLLA-SCSPEELIH 906 (1809)
T ss_pred EEEEccCCCCCCCEEEE-eCCHHHHHh
Confidence 99996 678874 577776653
No 86
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1e-42 Score=372.20 Aligned_cols=209 Identities=25% Similarity=0.412 Sum_probs=180.9
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCc--cEEEEcCCC--------ceEEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDS--GNVIKAKSN--------MKIAFL 166 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~--G~I~~~~~~--------~~i~~v 166 (645)
.|+++|++++|++..+|+|+||+|++|++++|+|||||||||||++|+|+++|++ |+|.++|.. ..|+|+
T Consensus 5 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig~v 84 (362)
T TIGR03258 5 GIRIDHLRVAYGANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLALL 84 (362)
T ss_pred EEEEEEEEEEECCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEEEE
Confidence 3899999999998889999999999999999999999999999999999999999 999998743 359999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.+++.+||+||+...+.. ...+.....+++.++++.+
T Consensus 85 fQ~~~l~p~~tv~enl~~~l~~---------------------------------------~~~~~~~~~~~v~~~l~~~ 125 (362)
T TIGR03258 85 FQNYALFPHLKVEDNVAFGLRA---------------------------------------QKMPKADIAERVADALKLV 125 (362)
T ss_pred ECCcccCCCCcHHHHHHHHHHH---------------------------------------cCCCHHHHHHHHHHHHHhc
Confidence 9999999999999998643210 0012223445677889999
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cC-CCeEEEEecCHHHHHh
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQ-DVPMVIISHDRAFLDQ 321 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~-g~tvIivsHd~~~l~~ 321 (645)
|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+..+.++.+.|+ +. |.|+|+||||++++..
T Consensus 126 gL~-~~~~~~~~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~ 204 (362)
T TIGR03258 126 GLG-DAAAHLPAQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALT 204 (362)
T ss_pred CCC-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHH
Confidence 996 67899999999999999999999999999999999999999999999988764 23 7899999999999999
Q ss_pred hcCeEEEEcCceeEEeccChHHHHH
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQYVL 346 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~~~~ 346 (645)
+||+|++|++|++. ..|+..+.+.
T Consensus 205 l~dri~vl~~G~i~-~~g~~~~~~~ 228 (362)
T TIGR03258 205 LADKAGIMKDGRLA-AHGEPQALYD 228 (362)
T ss_pred hCCEEEEEECCEEE-EEcCHHHHHh
Confidence 99999999999984 5576655543
No 87
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=6.4e-43 Score=350.25 Aligned_cols=195 Identities=30% Similarity=0.501 Sum_probs=166.1
Q ss_pred EEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------------
Q 006442 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------- 160 (645)
Q Consensus 98 i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------- 160 (645)
|+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 478999999976 679999999999999999999999999999999999999999999987632
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..++|++|++.+++..||.||+...... . .......++++
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~ 121 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLL---------------A------------------------GVPKKERRERA 121 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhh---------------c------------------------CCCHHHHHHHH
Confidence 2599999999887788999998532100 0 00011123456
Q ss_pred HhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 006442 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (645)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd 315 (645)
.++++.+|+. +..++.+.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .++|||++||+
T Consensus 122 ~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~ 200 (218)
T cd03255 122 EELLERVGLG-DRLNHYPSELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHD 200 (218)
T ss_pred HHHHHHcCCc-hhhhcChhhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 6778888986 456888999999999999999999999999999999999999999999888753 48899999999
Q ss_pred HHHHHhhcCeEEEEcCce
Q 006442 316 RAFLDQLCTKIVETEMGV 333 (645)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~ 333 (645)
++++. +||+++++++|+
T Consensus 201 ~~~~~-~~d~v~~l~~G~ 217 (218)
T cd03255 201 PELAE-YADRIIELRDGK 217 (218)
T ss_pred HHHHh-hhcEEEEeeCCc
Confidence 99997 999999999885
No 88
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=9.3e-43 Score=347.81 Aligned_cols=198 Identities=30% Similarity=0.464 Sum_probs=170.1
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEecc
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (645)
|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q~ 80 (213)
T cd03301 1 VELENVTKRFGNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQN 80 (213)
T ss_pred CEEEeeEEEECCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEecC
Confidence 478999999998889999999999999999999999999999999999999999999987642 259999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCC
Q 006442 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (645)
Q Consensus 170 ~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (645)
+.+++..|++||+...... . .......++++.++++.+|+.
T Consensus 81 ~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l~ 121 (213)
T cd03301 81 YALYPHMTVYDNIAFGLKL---------------R------------------------KVPKDEIDERVREVAELLQIE 121 (213)
T ss_pred hhhccCCCHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHHHcCCH
Confidence 9887788999998532100 0 011112234566778888886
Q ss_pred cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 006442 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (645)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ 325 (645)
+..++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .++|||++|||++++..+||+
T Consensus 122 -~~~~~~~~~LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~ 200 (213)
T cd03301 122 -HLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADR 200 (213)
T ss_pred -HHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCe
Confidence 567888999999999999999999999999999999999999999999988743 489999999999999999999
Q ss_pred EEEEcCceeE
Q 006442 326 IVETEMGVSR 335 (645)
Q Consensus 326 i~~l~~G~~~ 335 (645)
|+++++|++.
T Consensus 201 i~~l~~g~~~ 210 (213)
T cd03301 201 IAVMNDGQIQ 210 (213)
T ss_pred EEEEECCEEE
Confidence 9999999874
No 89
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-42 Score=373.63 Aligned_cols=207 Identities=27% Similarity=0.423 Sum_probs=177.6
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEec
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQ 168 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~Q 168 (645)
.|+++|++++|++..+|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.++|.. ..|+|++|
T Consensus 3 ~l~i~~l~~~~~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~Q 82 (369)
T PRK11000 3 SVTLRNVTKAYGDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVFQ 82 (369)
T ss_pred EEEEEEEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEeC
Confidence 4899999999998889999999999999999999999999999999999999999999997642 25999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++.+||+||+...... ...+.....+++.++++.+|+
T Consensus 83 ~~~l~~~~tv~eni~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~~lgL 123 (369)
T PRK11000 83 SYALYPHLSVAENMSFGLKL---------------------------------------AGAKKEEINQRVNQVAEVLQL 123 (369)
T ss_pred CcccCCCCCHHHHHHhHHhh---------------------------------------cCCCHHHHHHHHHHHHHHcCC
Confidence 99988899999998632110 001112234567788889999
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcC
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~d 324 (645)
. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|+ +.|.|+|+||||++++..+||
T Consensus 124 ~-~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d 202 (369)
T PRK11000 124 A-HLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLAD 202 (369)
T ss_pred h-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCC
Confidence 6 67889999999999999999999999999999999999999999999887764 348999999999999999999
Q ss_pred eEEEEcCceeEEeccChHHH
Q 006442 325 KIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 325 ~i~~l~~G~~~~~~g~~~~~ 344 (645)
+|++|++|++. ..|+..+.
T Consensus 203 ~i~vl~~G~i~-~~g~~~~i 221 (369)
T PRK11000 203 KIVVLDAGRVA-QVGKPLEL 221 (369)
T ss_pred EEEEEECCEEE-EEcCHHHH
Confidence 99999999984 44665444
No 90
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=8.9e-43 Score=348.22 Aligned_cols=197 Identities=29% Similarity=0.504 Sum_probs=168.1
Q ss_pred cEEEEeEEEEe-CCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------------ce
Q 006442 97 GVKLENISKSY-KGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MK 162 (645)
Q Consensus 97 ~i~i~nls~~y-~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-------------~~ 162 (645)
+|+++|++++| ++.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.+ ..
T Consensus 1 ~l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 1 MIEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred CEEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 37899999999 46789999999999999999999999999999999999999999999987632 25
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
++|++|++.+++..|+.+|+...... . .......++++.++
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~ 121 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEV---------------R------------------------GKKEREIQRRVGAA 121 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHH
Confidence 99999999887788999998532100 0 00111223456677
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFL 319 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l 319 (645)
++.+|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .++|||++||+++++
T Consensus 122 l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~ 200 (214)
T TIGR02673 122 LRQVGLE-HKADAFPEQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLV 200 (214)
T ss_pred HHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 8888886 567888999999999999999999999999999999999999999999988753 589999999999999
Q ss_pred HhhcCeEEEEcCce
Q 006442 320 DQLCTKIVETEMGV 333 (645)
Q Consensus 320 ~~~~d~i~~l~~G~ 333 (645)
..+||+++++++|+
T Consensus 201 ~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 201 DRVAHRVIILDDGR 214 (214)
T ss_pred HHhcCEEEEecCCC
Confidence 99999999998874
No 91
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-42 Score=348.17 Aligned_cols=197 Identities=31% Similarity=0.434 Sum_probs=168.5
Q ss_pred EEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----ceEEEEec
Q 006442 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQ 168 (645)
Q Consensus 98 i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----~~i~~v~Q 168 (645)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 478999999987 789999999999999999999999999999999999999999999998743 36999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++..|+.||+...... . ........+++.++++.+|+
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l 121 (220)
T cd03293 81 QDALLPWLTVLDNVALGLEL---------------Q------------------------GVPKAEARERAEELLELVGL 121 (220)
T ss_pred ccccccCCCHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHHHHcCC
Confidence 99887778999998532100 0 00111123456677888888
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcC
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d 324 (645)
. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .+.|||++||+++++..+||
T Consensus 122 ~-~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d 200 (220)
T cd03293 122 S-GFENAYPHQLSGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLAD 200 (220)
T ss_pred h-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCC
Confidence 6 567888999999999999999999999999999999999999999999988743 47899999999999999999
Q ss_pred eEEEEc--Ccee
Q 006442 325 KIVETE--MGVS 334 (645)
Q Consensus 325 ~i~~l~--~G~~ 334 (645)
++++++ +|++
T Consensus 201 ~i~~l~~~~G~i 212 (220)
T cd03293 201 RVVVLSARPGRI 212 (220)
T ss_pred EEEEEECCCCEE
Confidence 999999 6886
No 92
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2e-42 Score=369.32 Aligned_cols=212 Identities=29% Similarity=0.437 Sum_probs=180.2
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEec
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQ 168 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~Q 168 (645)
+|+++|++++|++..+|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.+ ..|+|++|
T Consensus 2 ~L~i~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~Q 81 (353)
T PRK10851 2 SIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQ 81 (353)
T ss_pred EEEEEEEEEEeCCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEec
Confidence 4899999999998889999999999999999999999999999999999999999999998743 35999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++.+||.||+...+... .. ....+..+..+++.++++.+|+
T Consensus 82 ~~~l~p~~tv~eni~~~~~~~--------------~~---------------------~~~~~~~~~~~~~~~~l~~~~L 126 (353)
T PRK10851 82 HYALFRHMTVFDNIAFGLTVL--------------PR---------------------RERPNAAAIKAKVTQLLEMVQL 126 (353)
T ss_pred CcccCCCCcHHHHHHhhhhhc--------------cc---------------------ccCCCHHHHHHHHHHHHHHcCC
Confidence 999988999999986332100 00 0001122344567788999999
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcC
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~d 324 (645)
. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|+ +.|.|+|+||||++++..+||
T Consensus 127 ~-~~~~~~~~~LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~D 205 (353)
T PRK10851 127 A-HLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVAD 205 (353)
T ss_pred c-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC
Confidence 6 67899999999999999999999999999999999999999999998887764 348999999999999999999
Q ss_pred eEEEEcCceeEEeccChHHHH
Q 006442 325 KIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 325 ~i~~l~~G~~~~~~g~~~~~~ 345 (645)
+|++|++|++. ..|...+.+
T Consensus 206 ri~vl~~G~i~-~~g~~~~i~ 225 (353)
T PRK10851 206 RVVVMSQGNIE-QAGTPDQVW 225 (353)
T ss_pred EEEEEECCEEE-EEcCHHHHH
Confidence 99999999984 556665544
No 93
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-42 Score=352.19 Aligned_cols=210 Identities=29% Similarity=0.444 Sum_probs=174.2
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEec
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQ 168 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~Q 168 (645)
.|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++|
T Consensus 2 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 81 (239)
T cd03296 2 SIEVRNVSKRFGDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVFQ 81 (239)
T ss_pred EEEEEeEEEEECCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEec
Confidence 3899999999998889999999999999999999999999999999999999999999998642 25999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++..||.||+....... . . .. ........+++.++++.+|+
T Consensus 82 ~~~~~~~~tv~e~l~~~~~~~-~-------~---~~------------------------~~~~~~~~~~~~~~l~~~~l 126 (239)
T cd03296 82 HYALFRHMTVFDNVAFGLRVK-P-------R---SE------------------------RPPEAEIRAKVHELLKLVQL 126 (239)
T ss_pred CCcccCCCCHHHHHhhhhhhc-c-------c---cc------------------------cCCHHHHHHHHHHHHHHcCC
Confidence 998877889999985321100 0 0 00 00011123345677888888
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcC
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d 324 (645)
. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .|+|||++|||++++..+||
T Consensus 127 ~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d 205 (239)
T cd03296 127 D-WLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVAD 205 (239)
T ss_pred h-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCC
Confidence 5 567888999999999999999999999999999999999999999999988753 38899999999999999999
Q ss_pred eEEEEcCceeEEeccChHH
Q 006442 325 KIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 325 ~i~~l~~G~~~~~~g~~~~ 343 (645)
+++++++|++. ..|..++
T Consensus 206 ~i~~l~~G~i~-~~~~~~~ 223 (239)
T cd03296 206 RVVVMNKGRIE-QVGTPDE 223 (239)
T ss_pred EEEEEECCeEE-EecCHHH
Confidence 99999999974 4455443
No 94
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-42 Score=344.08 Aligned_cols=198 Identities=28% Similarity=0.515 Sum_probs=170.2
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------ceEEEEeccCc
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------MKIAFLSQEFE 171 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------~~i~~v~Q~~~ 171 (645)
|+++|+++.|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|++.
T Consensus 1 l~~~~l~~~~~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q~~~ 80 (210)
T cd03269 1 LEVENVTKRFGRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPEERG 80 (210)
T ss_pred CEEEEEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEeccCCc
Confidence 478999999988889999999999999999999999999999999999999999999998754 35999999998
Q ss_pred cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcc
Q 006442 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (645)
Q Consensus 172 ~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (645)
+++..|+.||+..... .. ........+.+.++++.+|+. .
T Consensus 81 ~~~~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~~l~-~ 120 (210)
T cd03269 81 LYPKMKVIDQLVYLAQ---------------LK------------------------GLKKEEARRRIDEWLERLELS-E 120 (210)
T ss_pred CCcCCcHHHHHHHHHH---------------Hc------------------------CCChHHHHHHHHHHHHHcCCh-H
Confidence 8778899999752100 00 001112234566778888886 5
Q ss_pred cccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCeEEE
Q 006442 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTKIVE 328 (645)
Q Consensus 252 ~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d~i~~ 328 (645)
..++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .++|||++||+++++.++||++++
T Consensus 121 ~~~~~~~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~ 200 (210)
T cd03269 121 YANKRVEELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLL 200 (210)
T ss_pred HHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEE
Confidence 67788999999999999999999999999999999999999999999888753 478999999999999999999999
Q ss_pred EcCceeE
Q 006442 329 TEMGVSR 335 (645)
Q Consensus 329 l~~G~~~ 335 (645)
+++|++.
T Consensus 201 l~~g~i~ 207 (210)
T cd03269 201 LNKGRAV 207 (210)
T ss_pred EeCCEEE
Confidence 9999874
No 95
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.5e-42 Score=357.02 Aligned_cols=210 Identities=21% Similarity=0.321 Sum_probs=176.0
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------------c
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------M 161 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-------------~ 161 (645)
+.+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ .
T Consensus 5 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 5 ANLVDMRGVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred cceEEEeCeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 346999999999998889999999999999999999999999999999999999999999988632 2
Q ss_pred eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHh
Q 006442 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (645)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (645)
.++|++|++.+++..|+.||+...+... . ..+......++.+
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~--------------~------------------------~~~~~~~~~~~~~ 126 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREH--------------T------------------------QLPAPLLHSTVMM 126 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHc--------------c------------------------CCCHHHHHHHHHH
Confidence 5999999998877889999985321100 0 0000112234566
Q ss_pred hchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHH
Q 006442 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRA 317 (645)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~ 317 (645)
+++.+|+. +..++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|||++|||++
T Consensus 127 ~l~~~gl~-~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~ 205 (269)
T PRK11831 127 KLEAVGLR-GAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP 205 (269)
T ss_pred HHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH
Confidence 78888986 567888999999999999999999999999999999999999999999887753 3789999999999
Q ss_pred HHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 318 FLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 318 ~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
++..+||+++++++|++. +.|..+++
T Consensus 206 ~~~~~~d~v~~l~~G~i~-~~g~~~~~ 231 (269)
T PRK11831 206 EVLSIADHAYIVADKKIV-AHGSAQAL 231 (269)
T ss_pred HHHHhhCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999999974 55665443
No 96
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.9e-42 Score=346.91 Aligned_cols=199 Identities=30% Similarity=0.477 Sum_probs=170.6
Q ss_pred cEEEEeEEEEeCCe----eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceE
Q 006442 97 GVKLENISKSYKGV----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKI 163 (645)
Q Consensus 97 ~i~i~nls~~y~~~----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i 163 (645)
+|+++|++++|++. ++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 1 ~l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i 80 (218)
T cd03266 1 MITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRL 80 (218)
T ss_pred CeEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhE
Confidence 37899999999876 79999999999999999999999999999999999999999999998643 259
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhc
Q 006442 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (645)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (645)
+|++|++.+++..||.||+...... . ........+++.+++
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l 121 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGL---------------Y------------------------GLKGDELTARLEELA 121 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHH
Confidence 9999999887778999998521100 0 001112234566778
Q ss_pred hhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHH
Q 006442 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLD 320 (645)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~ 320 (645)
+.+|+. +..++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .|+|||++|||++++.
T Consensus 122 ~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~ 200 (218)
T cd03266 122 DRLGME-ELLDRRVGGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVE 200 (218)
T ss_pred HHcCCH-HHHhhhhhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 888885 567888999999999999999999999999999999999999999999888753 5899999999999999
Q ss_pred hhcCeEEEEcCceeE
Q 006442 321 QLCTKIVETEMGVSR 335 (645)
Q Consensus 321 ~~~d~i~~l~~G~~~ 335 (645)
.+||+++++++|++.
T Consensus 201 ~~~d~i~~l~~G~i~ 215 (218)
T cd03266 201 RLCDRVVVLHRGRVV 215 (218)
T ss_pred HhcCEEEEEECCEEe
Confidence 999999999999874
No 97
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-42 Score=367.52 Aligned_cols=206 Identities=29% Similarity=0.491 Sum_probs=174.8
Q ss_pred cEEEEeEEEEeC----CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------------
Q 006442 97 GVKLENISKSYK----GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (645)
Q Consensus 97 ~i~i~nls~~y~----~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------ 160 (645)
+|+++|++|+|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 489999999997 3679999999999999999999999999999999999999999999998642
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..|+|++|++.+++..||.||+...... . ..+.....+++
T Consensus 81 ~~~ig~v~q~~~l~~~~tv~eni~~~~~~---------------~------------------------~~~~~~~~~~~ 121 (343)
T PRK11153 81 RRQIGMIFQHFNLLSSRTVFDNVALPLEL---------------A------------------------GTPKAEIKARV 121 (343)
T ss_pred hcCEEEEeCCCccCCCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHH
Confidence 3599999999887889999998532100 0 01111223456
Q ss_pred HhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 006442 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (645)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd 315 (645)
.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .|+|||++|||
T Consensus 122 ~~~l~~~gL~-~~~~~~~~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~ 200 (343)
T PRK11153 122 TELLELVGLS-DKADRYPAQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHE 200 (343)
T ss_pred HHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 6788888986 567889999999999999999999999999999999999999999999988753 48999999999
Q ss_pred HHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
++++.++||+|++|++|++. +.|...+
T Consensus 201 ~~~i~~~~d~v~~l~~G~i~-~~g~~~~ 227 (343)
T PRK11153 201 MDVVKRICDRVAVIDAGRLV-EQGTVSE 227 (343)
T ss_pred HHHHHHhCCEEEEEECCEEE-EEcCHHH
Confidence 99999999999999999984 4565443
No 98
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=4.1e-42 Score=360.80 Aligned_cols=205 Identities=25% Similarity=0.488 Sum_probs=176.6
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEEec
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v~Q 168 (645)
++++|++|+|++..+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.+ ..+||++|
T Consensus 3 l~~~~l~~~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~~~q 82 (301)
T TIGR03522 3 IRVSSLTKLYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGYLPE 82 (301)
T ss_pred EEEEEEEEEECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEEecC
Confidence 899999999998889999999999999999999999999999999999999999999998743 25999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++..|+.||+..... +. ..+.....+++.++++.+|+
T Consensus 83 ~~~l~~~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~gl 123 (301)
T TIGR03522 83 HNPLYLDMYVREYLQFIAG---------------IY------------------------GMKGQLLKQRVEEMIELVGL 123 (301)
T ss_pred CCCCCCCCcHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHCCC
Confidence 9998888999999752100 00 01111223456678888898
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcCeE
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCTKI 326 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~d~i 326 (645)
. +..++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .++|||++||+++++.++||||
T Consensus 124 ~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i 202 (301)
T TIGR03522 124 R-PEQHKKIGQLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRV 202 (301)
T ss_pred c-hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEE
Confidence 6 567899999999999999999999999999999999999999999999988753 3789999999999999999999
Q ss_pred EEEcCceeEEeccChHH
Q 006442 327 VETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 327 ~~l~~G~~~~~~g~~~~ 343 (645)
+++++|++. +.|+.++
T Consensus 203 ~~l~~G~i~-~~g~~~~ 218 (301)
T TIGR03522 203 IIINKGKIV-ADKKLDE 218 (301)
T ss_pred EEEECCEEE-EeCCHHH
Confidence 999999984 6677554
No 99
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.7e-42 Score=349.88 Aligned_cols=214 Identities=28% Similarity=0.425 Sum_probs=174.0
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEEEE
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFL 166 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~~v 166 (645)
|+++|++++|++.++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v 80 (236)
T cd03219 1 LEVRGLTKRFGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGRT 80 (236)
T ss_pred CeeeeeEEEECCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEEE
Confidence 468999999988889999999999999999999999999999999999999999999987642 249999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.+++..||.||+......... ..+. .. ..........+++.++++.+
T Consensus 81 ~q~~~l~~~~tv~~~l~~~~~~~~~-----~~~~---~~---------------------~~~~~~~~~~~~~~~~l~~~ 131 (236)
T cd03219 81 FQIPRLFPELTVLENVMVAAQARTG-----SGLL---LA---------------------RARREEREARERAEELLERV 131 (236)
T ss_pred ecccccccCCCHHHHHHHHHhhccc-----cccc---cc---------------------cccccHHHHHHHHHHHHHHc
Confidence 9999888888999998532110000 0000 00 00000112234567788888
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhc
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~ 323 (645)
|+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|++ .|+|||++|||++++..+|
T Consensus 132 ~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~ 210 (236)
T cd03219 132 GLA-DLADRPAGELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLA 210 (236)
T ss_pred Ccc-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhC
Confidence 986 567888999999999999999999999999999999999999999999988743 5889999999999999999
Q ss_pred CeEEEEcCceeEEeccChH
Q 006442 324 TKIVETEMGVSRTYEGNYS 342 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~ 342 (645)
|+++++++|++. ..|+.+
T Consensus 211 d~i~~l~~G~i~-~~~~~~ 228 (236)
T cd03219 211 DRVTVLDQGRVI-AEGTPD 228 (236)
T ss_pred CEEEEEeCCEEE-eecCHH
Confidence 999999999874 445543
No 100
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.5e-42 Score=345.96 Aligned_cols=200 Identities=26% Similarity=0.444 Sum_probs=169.6
Q ss_pred cEEEEeEEEEe-CCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------------ce
Q 006442 97 GVKLENISKSY-KGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MK 162 (645)
Q Consensus 97 ~i~i~nls~~y-~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-------------~~ 162 (645)
+|+++|++++| +++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 1 MIRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred CEEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 37899999999 66789999999999999999999999999999999999999999999987642 25
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
++|++|++.+++..|+.||+...... . ..+......++.++
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~ 121 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLII---------------A------------------------GASGDDIRRRVSAA 121 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHh---------------c------------------------CCCHHHHHHHHHHH
Confidence 99999999887889999998532100 0 01111223345667
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFL 319 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l 319 (645)
++.+|+. +..++.+.+||||||||++|||||+.+|++|||||||++||+.+++.+.++|+ +.+.|||++|||++++
T Consensus 122 l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~ 200 (222)
T PRK10908 122 LDKVGLL-DKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLI 200 (222)
T ss_pred HHHcCCh-hhhhCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 8888886 46788899999999999999999999999999999999999999999988764 3478999999999999
Q ss_pred HhhcCeEEEEcCceeEE
Q 006442 320 DQLCTKIVETEMGVSRT 336 (645)
Q Consensus 320 ~~~~d~i~~l~~G~~~~ 336 (645)
..+||+|+++++|++..
T Consensus 201 ~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 201 SRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHhCCEEEEEECCEEcc
Confidence 99999999999998743
No 101
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.2e-43 Score=334.28 Aligned_cols=209 Identities=30% Similarity=0.437 Sum_probs=181.0
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCc-----------eEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-----------KIAF 165 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~-----------~i~~ 165 (645)
.+.++|+.|+|+.++++++|||+|++||++||+|||||||||.+.++.|+++|++|+|.+++.+. .|||
T Consensus 4 ~L~a~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGigY 83 (243)
T COG1137 4 TLVAENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGIGY 83 (243)
T ss_pred EEEehhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCccc
Confidence 48999999999999999999999999999999999999999999999999999999999987643 5999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChh--cHHHHHHhhc
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLD--TLDAKVSKLM 243 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ll 243 (645)
+||++.+|..+||.||++..+.-.. .+.+ +-..+++++|
T Consensus 84 LpQE~SIFr~LtV~dNi~~vlE~~~---------------------------------------~d~~~~~~~~~l~~LL 124 (243)
T COG1137 84 LPQEASIFRKLTVEDNIMAVLEIRE---------------------------------------KDLKKAERKEELDALL 124 (243)
T ss_pred ccccchHhhcCcHHHHHHHHHhhhh---------------------------------------cchhHHHHHHHHHHHH
Confidence 9999999999999999974321100 0011 1123466888
Q ss_pred hhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHH---HHccCCCeEEEEecCHHHHH
Q 006442 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEG---YLGKQDVPMVIISHDRAFLD 320 (645)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~---~L~~~g~tvIivsHd~~~l~ 320 (645)
++|.+. +..+++..+||||||+|+.|||||+.+|+++||||||+|+||.+...+.. .|+..|..|+++.|+..+..
T Consensus 125 ~ef~i~-hlr~~~a~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL 203 (243)
T COG1137 125 EEFHIT-HLRDSKAYSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETL 203 (243)
T ss_pred HHhchH-HHhcCcccccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHH
Confidence 889986 78899999999999999999999999999999999999999998777665 56778999999999999999
Q ss_pred hhcCeEEEEcCceeEEeccChHHHHH
Q 006442 321 QLCTKIVETEMGVSRTYEGNYSQYVL 346 (645)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~g~~~~~~~ 346 (645)
.+|||.+++.+|++ .+.|+.++.+.
T Consensus 204 ~i~dRaYIi~~G~v-la~G~p~ei~~ 228 (243)
T COG1137 204 DICDRAYIISDGKV-LAEGSPEEIVN 228 (243)
T ss_pred hhhheEEEEecCeE-EecCCHHHHhc
Confidence 99999999999998 56788766544
No 102
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.7e-42 Score=344.01 Aligned_cols=192 Identities=31% Similarity=0.540 Sum_probs=164.6
Q ss_pred EEEeEEEEeCC-eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------ceEEEEeccC
Q 006442 99 KLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------MKIAFLSQEF 170 (645)
Q Consensus 99 ~i~nls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-------~~i~~v~Q~~ 170 (645)
+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++|++
T Consensus 1 ~~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~~ 80 (205)
T cd03226 1 RIENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQDV 80 (205)
T ss_pred CcccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecCh
Confidence 36899999987 789999999999999999999999999999999999999999999998754 2699999997
Q ss_pred cc-CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCC
Q 006442 171 EV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (645)
Q Consensus 171 ~~-~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (645)
.. ++..|+.||+...... .. ....++.++++.+|+.
T Consensus 81 ~~~~~~~tv~e~l~~~~~~-----------------------------------------~~--~~~~~~~~~l~~~~l~ 117 (205)
T cd03226 81 DYQLFTDSVREELLLGLKE-----------------------------------------LD--AGNEQAETVLKDLDLY 117 (205)
T ss_pred hhhhhhccHHHHHhhhhhh-----------------------------------------cC--ccHHHHHHHHHHcCCc
Confidence 42 3567999998532100 00 0123456778888886
Q ss_pred cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeE
Q 006442 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKI 326 (645)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~i 326 (645)
+..++++.+||||||||++|||||+.+|++|||||||++||+.+++.+.++|+ +.|.|||++||+++++..+||++
T Consensus 118 -~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i 196 (205)
T cd03226 118 -ALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRV 196 (205)
T ss_pred -hhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEE
Confidence 56788899999999999999999999999999999999999999999998875 35899999999999999999999
Q ss_pred EEEcCcee
Q 006442 327 VETEMGVS 334 (645)
Q Consensus 327 ~~l~~G~~ 334 (645)
+++++|++
T Consensus 197 ~~l~~G~i 204 (205)
T cd03226 197 LLLANGAI 204 (205)
T ss_pred EEEECCEE
Confidence 99999874
No 103
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-42 Score=342.99 Aligned_cols=197 Identities=29% Similarity=0.458 Sum_probs=168.6
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEEec
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v~Q 168 (645)
|+++|++|+|+++++++|+||+|++| +++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++|
T Consensus 1 i~~~~~~~~~~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 79 (211)
T cd03264 1 LQLENLTKRYGKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLPQ 79 (211)
T ss_pred CEEEEEEEEECCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEecC
Confidence 47899999998888999999999999 999999999999999999999999999999998743 35999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++..||.||+...... . ..+....++.+.++++.+|+
T Consensus 80 ~~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l 120 (211)
T cd03264 80 EFGVYPNFTVREFLDYIAWL---------------K------------------------GIPSKEVKARVDEVLELVNL 120 (211)
T ss_pred CCcccccCCHHHHHHHHHHH---------------h------------------------CCCHHHHHHHHHHHHHHCCC
Confidence 99887788999998521100 0 00111223455677888888
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcCeE
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCTKI 326 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~d~i 326 (645)
. +..++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||++|||++++.++||++
T Consensus 121 ~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i 199 (211)
T cd03264 121 G-DRAKKKIGSLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQV 199 (211)
T ss_pred H-HHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEE
Confidence 6 566888999999999999999999999999999999999999999999988853 3689999999999999999999
Q ss_pred EEEcCceeE
Q 006442 327 VETEMGVSR 335 (645)
Q Consensus 327 ~~l~~G~~~ 335 (645)
+++++|++.
T Consensus 200 ~~l~~g~i~ 208 (211)
T cd03264 200 AVLNKGKLV 208 (211)
T ss_pred EEEECCEEE
Confidence 999999873
No 104
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=8.7e-42 Score=350.71 Aligned_cols=210 Identities=24% Similarity=0.417 Sum_probs=177.1
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------------
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------------- 160 (645)
..|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 83 (257)
T PRK10619 4 NKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVAD 83 (257)
T ss_pred ccEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccccccc
Confidence 35999999999998889999999999999999999999999999999999999999999988632
Q ss_pred --------ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCCh
Q 006442 161 --------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (645)
Q Consensus 161 --------~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (645)
..++|++|++.+++..|++||+...... +. ....
T Consensus 84 ~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~--------------~~------------------------~~~~ 125 (257)
T PRK10619 84 KNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQ--------------VL------------------------GLSK 125 (257)
T ss_pred chHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHH--------------hC------------------------CCCH
Confidence 2599999999887788999998532100 00 0011
Q ss_pred hcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeE
Q 006442 233 DTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPM 309 (645)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tv 309 (645)
...++++.++++.+|+.....++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|+ +.|+||
T Consensus 126 ~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~ti 205 (257)
T PRK10619 126 QEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTM 205 (257)
T ss_pred HHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEE
Confidence 12344566788888986444578899999999999999999999999999999999999999999998764 358999
Q ss_pred EEEecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 310 VIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 310 IivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
|+||||++++..+||+|+++++|++. +.|+++++
T Consensus 206 iivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 239 (257)
T PRK10619 206 VVVTHEMGFARHVSSHVIFLHQGKIE-EEGAPEQL 239 (257)
T ss_pred EEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHh
Confidence 99999999999999999999999984 55766554
No 105
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=4.9e-42 Score=347.17 Aligned_cols=205 Identities=28% Similarity=0.427 Sum_probs=172.9
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEEEE
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFL 166 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~~v 166 (645)
|+++|++++|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (232)
T cd03218 1 LRAENLSKRYGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGYL 80 (232)
T ss_pred CeEEEEEEEeCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEEe
Confidence 478999999998889999999999999999999999999999999999999999999987642 249999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.+++..|++||+....... .........++.++++.+
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~l~~~ 121 (232)
T cd03218 81 PQEASIFRKLTVEENILAVLEIR---------------------------------------GLSKKEREEKLEELLEEF 121 (232)
T ss_pred cCCccccccCcHHHHHHHHHHhc---------------------------------------CCCHHHHHHHHHHHHHHc
Confidence 99998877889999985321000 000111233456778888
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhc
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~ 323 (645)
|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|+ +.++|||++|||++++..+|
T Consensus 122 ~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~ 200 (232)
T cd03218 122 HIT-HLRKSKASSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSIT 200 (232)
T ss_pred CCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhC
Confidence 886 56788899999999999999999999999999999999999999999988774 35889999999999999999
Q ss_pred CeEEEEcCceeEEeccChHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~ 343 (645)
|+|+++++|++. ..|+.++
T Consensus 201 d~i~~l~~G~i~-~~~~~~~ 219 (232)
T cd03218 201 DRAYIIYEGKVL-AEGTPEE 219 (232)
T ss_pred CEEEEEECCeEE-EEeCHHH
Confidence 999999999974 4555443
No 106
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.8e-42 Score=343.61 Aligned_cols=196 Identities=28% Similarity=0.450 Sum_probs=166.9
Q ss_pred EEEEeEEEEeCC-eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------------ceE
Q 006442 98 VKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MKI 163 (645)
Q Consensus 98 i~i~nls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-------------~~i 163 (645)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 80 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKI 80 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHhe
Confidence 478999999965 579999999999999999999999999999999999999999999987642 259
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhc
Q 006442 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (645)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (645)
+|++|++.+++..|+.||+...... . ........+++.+++
T Consensus 81 ~~v~q~~~~~~~~t~~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l 121 (214)
T cd03292 81 GVVFQDFRLLPDRNVYENVAFALEV---------------T------------------------GVPPREIRKRVPAAL 121 (214)
T ss_pred EEEecCchhccCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHH
Confidence 9999999887888999998532100 0 001112234566778
Q ss_pred hhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHH
Q 006442 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLD 320 (645)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~ 320 (645)
+.+|+. +..++++.+||||||||++|||||+.+|++|||||||++||+.+++.+.+.|+ +.++|||++||+++++.
T Consensus 122 ~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~ 200 (214)
T cd03292 122 ELVGLS-HKHRALPAELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVD 200 (214)
T ss_pred HHcCCH-HHhhCChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 888886 56788899999999999999999999999999999999999999999988774 35899999999999999
Q ss_pred hhcCeEEEEcCce
Q 006442 321 QLCTKIVETEMGV 333 (645)
Q Consensus 321 ~~~d~i~~l~~G~ 333 (645)
.+||+++++++|+
T Consensus 201 ~~~d~i~~l~~G~ 213 (214)
T cd03292 201 TTRHRVIALERGK 213 (214)
T ss_pred HhCCEEEEEeCCc
Confidence 9999999999885
No 107
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-42 Score=351.92 Aligned_cols=199 Identities=24% Similarity=0.324 Sum_probs=170.0
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----ceEEEEeccCc
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQEFE 171 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----~~i~~v~Q~~~ 171 (645)
+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|++.
T Consensus 1 ml~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~ 80 (255)
T PRK11248 1 MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQNEG 80 (255)
T ss_pred CEEEEEEEEEeCCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCCCc
Confidence 3789999999988889999999999999999999999999999999999999999999997643 25899999998
Q ss_pred cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcc
Q 006442 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (645)
Q Consensus 172 ~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (645)
+++..||.+|+...... . .+......+++.++++.+|+. +
T Consensus 81 ~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~gl~-~ 120 (255)
T PRK11248 81 LLPWRNVQDNVAFGLQL---------------A------------------------GVEKMQRLEIAHQMLKKVGLE-G 120 (255)
T ss_pred cCCCCcHHHHHHhHHHH---------------c------------------------CCCHHHHHHHHHHHHHHcCCh-h
Confidence 87778999998532100 0 001112234567788888986 5
Q ss_pred cccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEE
Q 006442 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIV 327 (645)
Q Consensus 252 ~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~i~ 327 (645)
..++++.+||||||||++|||||+.+|++|||||||++||+.++.++.++|++ .|+|||++|||++++..+||+++
T Consensus 121 ~~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~ 200 (255)
T PRK11248 121 AEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELV 200 (255)
T ss_pred HhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEE
Confidence 67888999999999999999999999999999999999999999999988753 48999999999999999999999
Q ss_pred EEc--CceeE
Q 006442 328 ETE--MGVSR 335 (645)
Q Consensus 328 ~l~--~G~~~ 335 (645)
+++ +|++.
T Consensus 201 ~l~~~~G~i~ 210 (255)
T PRK11248 201 LLSPGPGRVV 210 (255)
T ss_pred EEeCCCcEEE
Confidence 998 47763
No 108
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.9e-42 Score=344.33 Aligned_cols=202 Identities=28% Similarity=0.443 Sum_probs=170.4
Q ss_pred EEEEeEEEEeCC--eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEE
Q 006442 98 VKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFL 166 (645)
Q Consensus 98 i~i~nls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v 166 (645)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 578999999987 789999999999999999999999999999999999999999999998753 249999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.+++..|+.+|+...... . ........+++.++++.+
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~ 121 (220)
T cd03263 81 PQFDALFDELTVREHLRFYARL---------------K------------------------GLPKSEIKEEVELLLRVL 121 (220)
T ss_pred cCcCCccccCCHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHHHHc
Confidence 9999887788999997521100 0 001112234456777888
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcC
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~d 324 (645)
|+. +..++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++||+++++.++||
T Consensus 122 ~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d 200 (220)
T cd03263 122 GLT-DKANKRARTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCD 200 (220)
T ss_pred CCH-HHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcC
Confidence 885 566788999999999999999999999999999999999999999999988753 35899999999999999999
Q ss_pred eEEEEcCceeEEeccC
Q 006442 325 KIVETEMGVSRTYEGN 340 (645)
Q Consensus 325 ~i~~l~~G~~~~~~g~ 340 (645)
+++++++|++. ..|+
T Consensus 201 ~i~~l~~g~i~-~~~~ 215 (220)
T cd03263 201 RIAIMSDGKLR-CIGS 215 (220)
T ss_pred EEEEEECCEEE-ecCC
Confidence 99999999874 4444
No 109
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-42 Score=352.74 Aligned_cols=194 Identities=25% Similarity=0.411 Sum_probs=169.2
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----ceEEEEeccC
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQEF 170 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----~~i~~v~Q~~ 170 (645)
+.|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.. ..++|++|++
T Consensus 11 ~~l~i~~l~~~~~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~q~~ 90 (257)
T PRK11247 11 TPLLLNAVSKRYGERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMFQDA 90 (257)
T ss_pred CcEEEEEEEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEecCc
Confidence 45999999999998889999999999999999999999999999999999999999999987643 3699999999
Q ss_pred ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCc
Q 006442 171 EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTA 250 (645)
Q Consensus 171 ~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~ 250 (645)
.+++..||+||+...+.. ..+.++.++++.+|+.
T Consensus 91 ~l~~~~tv~enl~~~~~~---------------------------------------------~~~~~~~~~l~~~gl~- 124 (257)
T PRK11247 91 RLLPWKKVIDNVGLGLKG---------------------------------------------QWRDAALQALAAVGLA- 124 (257)
T ss_pred cCCCCCcHHHHHHhcccc---------------------------------------------hHHHHHHHHHHHcCCh-
Confidence 887778999998532100 0012345667778885
Q ss_pred ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcCeE
Q 006442 251 DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCTKI 326 (645)
Q Consensus 251 ~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~d~i 326 (645)
+..++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|+ +.++|||+||||++++..+||+|
T Consensus 125 ~~~~~~~~~LSgGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i 204 (257)
T PRK11247 125 DRANEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRV 204 (257)
T ss_pred hHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEE
Confidence 46688899999999999999999999999999999999999999999988774 34899999999999999999999
Q ss_pred EEEcCceeE
Q 006442 327 VETEMGVSR 335 (645)
Q Consensus 327 ~~l~~G~~~ 335 (645)
+++++|++.
T Consensus 205 ~~l~~G~i~ 213 (257)
T PRK11247 205 LLIEEGKIG 213 (257)
T ss_pred EEEECCEEE
Confidence 999999874
No 110
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=8.2e-42 Score=349.43 Aligned_cols=208 Identities=26% Similarity=0.450 Sum_probs=174.6
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------------- 160 (645)
+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK11264 3 AIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIRQ 82 (250)
T ss_pred cEEEeceEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHHH
Confidence 5999999999988889999999999999999999999999999999999999999999887531
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
..++|++|++.+++..|+.||+...... .. ........++
T Consensus 83 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~--------------~~------------------------~~~~~~~~~~ 124 (250)
T PRK11264 83 LRQHVGFVFQNFNLFPHRTVLENIIEGPVI--------------VK------------------------GEPKEEATAR 124 (250)
T ss_pred hhhhEEEEecCcccCCCCCHHHHHHHHHHH--------------hc------------------------CCCHHHHHHH
Confidence 2599999999887788999998532100 00 0011122345
Q ss_pred HHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecC
Q 006442 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHD 315 (645)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd 315 (645)
+.++++.+|+. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|+ +.|.|||++|||
T Consensus 125 ~~~~l~~~gl~-~~~~~~~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~ 203 (250)
T PRK11264 125 ARELLAKVGLA-GKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHE 203 (250)
T ss_pred HHHHHHHcCCc-chhhCChhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 56778888986 45688899999999999999999999999999999999999999999988774 358999999999
Q ss_pred HHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
++++..+||+++++++|++. +.|+.+++
T Consensus 204 ~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 231 (250)
T PRK11264 204 MSFARDVADRAIFMDQGRIV-EQGPAKAL 231 (250)
T ss_pred HHHHHHhcCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999999999874 45665443
No 111
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.5e-42 Score=324.73 Aligned_cols=196 Identities=30% Similarity=0.408 Sum_probs=174.0
Q ss_pred EEEEEeeeeeeCC-eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-------------
Q 006442 424 VVTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~-~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------- 489 (645)
||+++||++.|++ +++|+|+||+|++||++-|+||||||||||||+|++..+|++|+|+++|.++.
T Consensus 1 mI~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 1 MIRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred CeeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 5899999999974 56999999999999999999999999999999999999999999999998863
Q ss_pred cchhccchhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCC
Q 006442 490 PNYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (645)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 563 (645)
.+.++ |+..+.++.||+||+++...- .-..++.+.|+.+|+. +..+..|.+|||||||||+||||++.+|+
T Consensus 81 IGvVF--QD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~-~k~~~lP~~LSGGEQQRvaIARAiV~~P~ 157 (223)
T COG2884 81 IGVVF--QDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLK-HKARALPSQLSGGEQQRVAIARAIVNQPA 157 (223)
T ss_pred eeeEe--eeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccc-hhhhcCccccCchHHHHHHHHHHHccCCC
Confidence 23334 345677899999999986431 1234688899999995 67889999999999999999999999999
Q ss_pred eEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeC
Q 006442 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYA 622 (645)
Q Consensus 564 lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~ 622 (645)
+||.||||.+|||+....+++++.++ +.||||.|||.+.+.++-.|++.+++|++..+.
T Consensus 158 vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 158 VLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred eEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 99999999999999999999998876 459999999999999999999999999998754
No 112
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8e-42 Score=347.45 Aligned_cols=208 Identities=24% Similarity=0.411 Sum_probs=175.5
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------------ceEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKIA 164 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------~~i~ 164 (645)
+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++
T Consensus 1 ~l~~~~l~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 80 (240)
T PRK09493 1 MIEFKNVSKHFGPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAG 80 (240)
T ss_pred CEEEEeEEEEECCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceE
Confidence 3789999999988889999999999999999999999999999999999999999999988632 2599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
|++|++.+++..||.+|+...... .. ........+++.++++
T Consensus 81 ~~~q~~~~~~~~tv~~~l~~~~~~--------------~~------------------------~~~~~~~~~~~~~~l~ 122 (240)
T PRK09493 81 MVFQQFYLFPHLTALENVMFGPLR--------------VR------------------------GASKEEAEKQARELLA 122 (240)
T ss_pred EEecccccCCCCcHHHHHHhHHHH--------------hc------------------------CCCHHHHHHHHHHHHH
Confidence 999999887888999998522100 00 0011122345667888
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHh
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~ 321 (645)
.+|+. +..++.+.+||||||||++|||||+.+|++|||||||++||+.++.++.++|+ +.++|||++||+++++..
T Consensus 123 ~~gl~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~ 201 (240)
T PRK09493 123 KVGLA-ERAHHYPSELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEK 201 (240)
T ss_pred HcCCh-HHHhcChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 88986 56788899999999999999999999999999999999999999999988874 358999999999999999
Q ss_pred hcCeEEEEcCceeEEeccChHHH
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+||+++++++|++. +.|+..++
T Consensus 202 ~~d~i~~l~~G~i~-~~g~~~~~ 223 (240)
T PRK09493 202 VASRLIFIDKGRIA-EDGDPQVL 223 (240)
T ss_pred hCCEEEEEECCEEE-eeCCHHHH
Confidence 99999999999984 55665543
No 113
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-42 Score=358.15 Aligned_cols=207 Identities=22% Similarity=0.325 Sum_probs=173.3
Q ss_pred EEEEeEEEEeCC-----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------------
Q 006442 98 VKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (645)
Q Consensus 98 i~i~nls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------ 160 (645)
|+++|++|+|++ .++|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 899999999974 469999999999999999999999999999999999999999999998742
Q ss_pred --ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 --MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 --~~i~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..|+||+|++. .++..||.||+...... ...+.....+
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~---------------------------------------~~~~~~~~~~ 123 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMN---------------------------------------FGVSEEDAKQ 123 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHH---------------------------------------cCCCHHHHHH
Confidence 25999999973 23457999998522100 0011122334
Q ss_pred HHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 006442 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (645)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivs 313 (645)
++.++++.+|+.....++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|++ .|.|||++|
T Consensus 124 ~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiit 203 (290)
T PRK13634 124 KAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVT 203 (290)
T ss_pred HHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 5677888999965567899999999999999999999999999999999999999999999887742 489999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
||++++..+||+|++|++|++ .+.|+..+.
T Consensus 204 Hd~~~~~~~~drv~~l~~G~i-~~~g~~~~~ 233 (290)
T PRK13634 204 HSMEDAARYADQIVVMHKGTV-FLQGTPREI 233 (290)
T ss_pred CCHHHHHHhCCEEEEEECCEE-EEECCHHHH
Confidence 999999999999999999998 456765544
No 114
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-42 Score=346.94 Aligned_cols=201 Identities=30% Similarity=0.433 Sum_probs=173.2
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-------------cc
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------PN 491 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------~~ 491 (645)
|+++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i~ 80 (235)
T cd03261 1 IELRGLTKSFGGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRMG 80 (235)
T ss_pred CeEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcceE
Confidence 47899999998888999999999999999999999999999999999999999999999997652 12
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhcc---cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCe
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~---~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 564 (645)
|++|+ ..+.+..|+.+|+...... .. ...+..+++.+++. +..++++.+|||||||||+|||||+.+|++
T Consensus 81 ~v~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~ia~al~~~p~l 157 (235)
T cd03261 81 MLFQS--GALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLR-GAEDLYPAELSGGMKKRVALARALALDPEL 157 (235)
T ss_pred EEccC--cccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 44443 3455678999999764221 11 23467889999995 567899999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 565 LlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||||||++||+.++..+.+.|++. +.|||+||||++++..+|||+++|++|++.. .|+.+++.
T Consensus 158 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~ 225 (235)
T cd03261 158 LLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVA-EGTPEELR 225 (235)
T ss_pred EEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEE-ecCHHHHc
Confidence 9999999999999999999999864 5699999999999999999999999999974 57766654
No 115
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-42 Score=358.68 Aligned_cols=208 Identities=22% Similarity=0.345 Sum_probs=173.5
Q ss_pred cEEEEeEEEEeCCe-----eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKGV-----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~-----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------- 160 (645)
.|+++|++++|++. ++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+++.+
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 38999999999753 59999999999999999999999999999999999999999999986421
Q ss_pred -----------------------ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhH
Q 006442 161 -----------------------MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRL 216 (645)
Q Consensus 161 -----------------------~~i~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (645)
..|||++|+|. .++..||+||+......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~---------------------------- 133 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVS---------------------------- 133 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHH----------------------------
Confidence 24899999873 23457999998522100
Q ss_pred HHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHH
Q 006442 217 LDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIE 296 (645)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~ 296 (645)
...+.....+++.++++.+|+..+..++++.+|||||||||+|||||+.+|++|||||||++||+.++.
T Consensus 134 -----------~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~ 202 (305)
T PRK13651 134 -----------MGVSKEEAKKRAAKYIELVGLDESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVK 202 (305)
T ss_pred -----------cCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHH
Confidence 011222344567788899999656789999999999999999999999999999999999999999999
Q ss_pred HHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 297 WLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 297 ~l~~~L~---~~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
.+.++|+ +.|.|||+||||++++.++||+|++|++|++ .+.|...+.
T Consensus 203 ~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~G~i-~~~g~~~~~ 252 (305)
T PRK13651 203 EILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKDGKI-IKDGDTYDI 252 (305)
T ss_pred HHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEECCEE-EEECCHHHH
Confidence 9988774 4589999999999999999999999999997 455665443
No 116
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=5e-42 Score=341.33 Aligned_cols=194 Identities=32% Similarity=0.476 Sum_probs=168.3
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCc--------eEEEEecc
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM--------KIAFLSQE 169 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~--------~i~~v~Q~ 169 (645)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|... .++|++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 80 (208)
T cd03268 1 LKTNDLTKTYGKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIEA 80 (208)
T ss_pred CEEEEEEEEECCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecCC
Confidence 4789999999888899999999999999999999999999999999999999999999987542 59999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCC
Q 006442 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (645)
Q Consensus 170 ~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (645)
+.+++..|+.||+...... . .. -+.++.++++.+|+.
T Consensus 81 ~~~~~~~tv~e~l~~~~~~---------------~------------------------~~----~~~~~~~~l~~~~l~ 117 (208)
T cd03268 81 PGFYPNLTARENLRLLARL---------------L------------------------GI----RKKRIDEVLDVVGLK 117 (208)
T ss_pred CccCccCcHHHHHHHHHHh---------------c------------------------CC----cHHHHHHHHHHcCCH
Confidence 9887889999998532100 0 00 023455667778885
Q ss_pred cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCeE
Q 006442 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTKI 326 (645)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d~i 326 (645)
+..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .++|||++|||++++..+||++
T Consensus 118 -~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v 196 (208)
T cd03268 118 -DSAKKKVKGFSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRI 196 (208)
T ss_pred -HHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEE
Confidence 567888999999999999999999999999999999999999999999888753 5899999999999999999999
Q ss_pred EEEcCceeE
Q 006442 327 VETEMGVSR 335 (645)
Q Consensus 327 ~~l~~G~~~ 335 (645)
+++++|++.
T Consensus 197 ~~l~~g~i~ 205 (208)
T cd03268 197 GIINKGKLI 205 (208)
T ss_pred EEEECCEEE
Confidence 999999863
No 117
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=4.9e-42 Score=342.53 Aligned_cols=197 Identities=29% Similarity=0.494 Sum_probs=167.9
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------------ceEEE
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKIAF 165 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------~~i~~ 165 (645)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 1 l~~~~l~~~~~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~ 80 (213)
T cd03262 1 IEIKNLHKSFGDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVGM 80 (213)
T ss_pred CEEEEEEEEECCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcceE
Confidence 478999999988889999999999999999999999999999999999999999999998642 24999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.+++..|+.||+...... .. ........+++.++++.
T Consensus 81 ~~q~~~~~~~~t~~e~l~~~~~~--------------~~------------------------~~~~~~~~~~~~~~l~~ 122 (213)
T cd03262 81 VFQQFNLFPHLTVLENITLAPIK--------------VK------------------------GMSKAEAEERALELLEK 122 (213)
T ss_pred EecccccCCCCcHHHHHHhHHHH--------------hc------------------------CCCHHHHHHHHHHHHHH
Confidence 99999887788999998532100 00 00111223445667788
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhh
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQL 322 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~ 322 (645)
+|+. +..++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|+ +.|.|||++||+++++.++
T Consensus 123 ~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~ 201 (213)
T cd03262 123 VGLA-DKADAYPAQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREV 201 (213)
T ss_pred cCCH-hHhhhCccccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHh
Confidence 8886 46788899999999999999999999999999999999999999999998875 3588999999999999999
Q ss_pred cCeEEEEcCce
Q 006442 323 CTKIVETEMGV 333 (645)
Q Consensus 323 ~d~i~~l~~G~ 333 (645)
||+++++++|+
T Consensus 202 ~d~i~~l~~g~ 212 (213)
T cd03262 202 ADRVIFMDDGR 212 (213)
T ss_pred CCEEEEEeCCc
Confidence 99999999885
No 118
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.9e-42 Score=344.13 Aligned_cols=192 Identities=27% Similarity=0.425 Sum_probs=167.0
Q ss_pred EEEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc------------
Q 006442 424 VVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------ 489 (645)
+|+++|+++.|++ +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 1 MIRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred CeEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 4789999999964 46999999999999999999999999999999999999999999999998652
Q ss_pred -cchhccchhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCC
Q 006442 490 -PNYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPS 562 (645)
Q Consensus 490 -~~~~~q~~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p 562 (645)
.+|++|+ ..+.+..|+.+|+...... ....++.++++.+++. +..++++.+|||||||||+|||||+.+|
T Consensus 81 ~i~~~~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p 157 (216)
T TIGR00960 81 HIGMVFQD--HRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLE-GKAHALPMQLSGGEQQRVAIARAIVHKP 157 (216)
T ss_pred hceEEecC--ccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 1344443 3455678999999764211 1234578899999994 6678999999999999999999999999
Q ss_pred CeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeE
Q 006442 563 TLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (645)
Q Consensus 563 ~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i 618 (645)
++|||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|++
T Consensus 158 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 158 PLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999875 46999999999999999999999999874
No 119
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-42 Score=347.10 Aligned_cols=205 Identities=32% Similarity=0.526 Sum_probs=173.0
Q ss_pred cEEEEeEEEEeCCe----eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------------
Q 006442 97 GVKLENISKSYKGV----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------ 160 (645)
+|+++|++++|+++ ++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 1 ~i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (233)
T cd03258 1 MIELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKA 80 (233)
T ss_pred CeEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHH
Confidence 37899999999876 89999999999999999999999999999999999999999999987642
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..++|++|++.+++..|+.||+...+.. . ..........+
T Consensus 81 ~~~i~~~~q~~~~~~~~t~~e~l~~~~~~---------------~------------------------~~~~~~~~~~~ 121 (233)
T cd03258 81 RRRIGMIFQHFNLLSSRTVFENVALPLEI---------------A------------------------GVPKAEIEERV 121 (233)
T ss_pred HhheEEEccCcccCCCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHH
Confidence 2599999999887788999998532110 0 00111123345
Q ss_pred HhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 006442 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (645)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd 315 (645)
.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .|+|||++||+
T Consensus 122 ~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~ 200 (233)
T cd03258 122 LELLELVGLE-DKADAYPAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHE 200 (233)
T ss_pred HHHHHHCCCh-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 6778888886 567888999999999999999999999999999999999999999999888743 38999999999
Q ss_pred HHHHHhhcCeEEEEcCceeEEeccChH
Q 006442 316 RAFLDQLCTKIVETEMGVSRTYEGNYS 342 (645)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~g~~~ 342 (645)
++++..+||+++++++|++. ..|+..
T Consensus 201 ~~~~~~~~d~i~~l~~G~i~-~~~~~~ 226 (233)
T cd03258 201 MEVVKRICDRVAVMEKGEVV-EEGTVE 226 (233)
T ss_pred HHHHHHhCCEEEEEECCEEE-EecCHH
Confidence 99999999999999999984 445543
No 120
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.7e-42 Score=342.96 Aligned_cols=195 Identities=32% Similarity=0.477 Sum_probs=164.1
Q ss_pred EEEeEEEEeCC--eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEEE
Q 006442 99 KLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (645)
Q Consensus 99 ~i~nls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~v 166 (645)
+++|++++|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.. ..|+|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 36899999987 789999999999999999999999999999999999999999999998642 259999
Q ss_pred eccCcc-CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 167 SQEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 167 ~Q~~~~-~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
+|++.. ++..|+.+|+...... . .........++.++++.
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~ 121 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLEN---------------L------------------------GLPEEEIEERVEEALEL 121 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHHHH
Confidence 999743 5678999998532100 0 00111123345677888
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhh
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQL 322 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~ 322 (645)
+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .|.|||++|||++++..+
T Consensus 122 ~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~ 200 (211)
T cd03225 122 VGLE-GLRDRSPFTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLEL 200 (211)
T ss_pred cCcH-hhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHh
Confidence 8886 567888999999999999999999999999999999999999999999988743 478999999999999999
Q ss_pred cCeEEEEcCce
Q 006442 323 CTKIVETEMGV 333 (645)
Q Consensus 323 ~d~i~~l~~G~ 333 (645)
||+|+++++|+
T Consensus 201 ~d~i~~l~~G~ 211 (211)
T cd03225 201 ADRVIVLEDGK 211 (211)
T ss_pred CCEEEEEeCCC
Confidence 99999998874
No 121
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.1e-43 Score=331.82 Aligned_cols=205 Identities=27% Similarity=0.414 Sum_probs=171.6
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCe-----eEEEECceecc-------
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRG-----GEVLLGEHNVL------- 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~-----G~i~~~g~~~~------- 489 (645)
.+.++++|+++.|+++.+|++||+.|++++++||+||+|||||||||++.++.+... |+|.++|.++.
T Consensus 5 ~~~~~~~~l~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 5 IPAIEVRDLNLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred cceeEecceeEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 356899999999999999999999999999999999999999999999999988765 99999999873
Q ss_pred -----cchhccchhhcCCCCCCHHHHHHhhhcccc------HHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHHHHH
Q 006442 490 -----PNYFEQNQAEALDLDKTVLETVAEAAEDWR------IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFC 555 (645)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~v~~~~~~~~------~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~lA 555 (645)
.+.++|.+ +- +.+|++|||.++..... .+.+...|....+= .+.+++.+..||||||||+|||
T Consensus 85 ~lRr~vGMVFQkP--nP-Fp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcIA 161 (253)
T COG1117 85 ELRRRVGMVFQKP--NP-FPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCIA 161 (253)
T ss_pred HHHHHheeeccCC--CC-CCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHHH
Confidence 23455543 33 45999999998754211 12244455544431 3456788889999999999999
Q ss_pred HHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhcCc--eEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKG--TVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~~~--tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|||+.+|+|||||||||+|||-+...+.++|.+++. |||+|||.+.-+.+++|+..++..|+++++ |+-+.++.
T Consensus 162 RalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~-g~T~~iF~ 237 (253)
T COG1117 162 RALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEF-GPTDKIFT 237 (253)
T ss_pred HHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEE-cCHHhhhc
Confidence 999999999999999999999999999999998854 999999999999999999999999999987 55555543
No 122
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-42 Score=355.87 Aligned_cols=209 Identities=22% Similarity=0.296 Sum_probs=174.4
Q ss_pred cEEEEeEEEEeCC-----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------- 160 (645)
+|+++|++|+|+. ..+|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 4899999999963 259999999999999999999999999999999999999999999998743
Q ss_pred ---ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHH
Q 006442 161 ---MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (645)
Q Consensus 161 ---~~i~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (645)
..|+|++|+|. .++..||.+|+...... ..++..+.+
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~---------------------------------------~~~~~~~~~ 121 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQN---------------------------------------FGIPKEKAE 121 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHH---------------------------------------cCCCHHHHH
Confidence 14899999872 23456999998532100 001122334
Q ss_pred HHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEe
Q 006442 237 AKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIIS 313 (645)
Q Consensus 237 ~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivs 313 (645)
.++.++++.+|+.....++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|+ +.|.|||++|
T Consensus 122 ~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vt 201 (288)
T PRK13643 122 KIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVT 201 (288)
T ss_pred HHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 5667888888986456789999999999999999999999999999999999999999999988774 3589999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHHHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~~ 345 (645)
||++++..+||+|++|++|++ .+.|..++++
T Consensus 202 Hd~~~~~~~~dri~~l~~G~i-~~~g~~~~~~ 232 (288)
T PRK13643 202 HLMDDVADYADYVYLLEKGHI-ISCGTPSDVF 232 (288)
T ss_pred cCHHHHHHhCCEEEEEECCEE-EEECCHHHHH
Confidence 999999999999999999998 4667766553
No 123
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-41 Score=354.96 Aligned_cols=208 Identities=24% Similarity=0.418 Sum_probs=173.9
Q ss_pred cEEEEeEEEEeCC-----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------- 160 (645)
.|+++|++|+|++ +++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 3899999999974 369999999999999999999999999999999999999999999987632
Q ss_pred -ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 -MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 -~~i~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
..|||++|++. .++..||+||+...... ..++..+..++
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~---------------------------------------~~~~~~~~~~~ 122 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPIN---------------------------------------LGLSEEEIENR 122 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHH---------------------------------------CCCCHHHHHHH
Confidence 25999999974 23467999998521100 00122233456
Q ss_pred HHhhchhcCCCc-ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 006442 239 VSKLMPELGFTA-DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (645)
Q Consensus 239 i~~ll~~lgl~~-~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivs 313 (645)
+.++++.+|+.. +..++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .|.|||++|
T Consensus 123 ~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vt 202 (287)
T PRK13637 123 VKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVS 202 (287)
T ss_pred HHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 778888999962 467899999999999999999999999999999999999999999999888742 489999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
||++++..+||+|+++++|++. ..|+..++
T Consensus 203 Hd~~~~~~~~drv~~l~~G~i~-~~g~~~~~ 232 (287)
T PRK13637 203 HSMEDVAKLADRIIVMNKGKCE-LQGTPREV 232 (287)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EECCHHHH
Confidence 9999999999999999999984 55665554
No 124
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=7.3e-42 Score=362.74 Aligned_cols=202 Identities=26% Similarity=0.376 Sum_probs=175.1
Q ss_pred EEEEEeeeeeeCC----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------
Q 006442 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (645)
||+++|++++|++ +.+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 4899999999952 47999999999999999999999999999999999999999999999998762
Q ss_pred ---cchhccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHcc
Q 006442 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (645)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~ 560 (645)
.+|++|+ ..+.+..|+.+|+.+.... +. .+++.++|+.+|+. +..++++.+|||||||||+|||||+.
T Consensus 81 r~~Ig~v~Q~--~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~-~~~~~~~~~LSgGqkQRV~IARAL~~ 157 (343)
T TIGR02314 81 RRQIGMIFQH--FNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLG-DKHDSYPSNLSGGQKQRVAIARALAS 157 (343)
T ss_pred hcCEEEEECC--ccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHHh
Confidence 2344544 3566778999999875421 11 23577899999994 67899999999999999999999999
Q ss_pred CCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 561 ~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+|++|||||||++||+.++..+.+.|++. +.|||+||||++.+.++||||++|++|++++ .|+.++++
T Consensus 158 ~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~-~g~~~~v~ 229 (343)
T TIGR02314 158 NPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIE-QGTVSEIF 229 (343)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHH
Confidence 99999999999999999999999988764 5699999999999999999999999999985 46665554
No 125
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-42 Score=341.96 Aligned_cols=193 Identities=33% Similarity=0.489 Sum_probs=169.0
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhccc
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~q~ 496 (645)
|+++|++++|+++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q~ 80 (213)
T cd03259 1 LELKGLSKTYGSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQD 80 (213)
T ss_pred CeeeeeEEEeCCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcCc
Confidence 47899999998888999999999999999999999999999999999999999999999998752 2355554
Q ss_pred hhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCC
Q 006442 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (645)
Q Consensus 497 ~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 570 (645)
. .+.+..|+.+|+...... ...+.+.++++.+++. +..++++.+|||||||||+|||||+.+|++||||||
T Consensus 81 ~--~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllDEP 157 (213)
T cd03259 81 Y--ALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLE-GLLNRYPHELSGGQQQRVALARALAREPSLLLLDEP 157 (213)
T ss_pred h--hhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3 455678999999764321 1123577889999995 667899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 571 t~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
|++||+.++..+.+.|.++ +.|||++|||++++.++||++++|++|++..
T Consensus 158 t~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~ 211 (213)
T cd03259 158 LSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQ 211 (213)
T ss_pred cccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEe
Confidence 9999999999999999864 4699999999999999999999999999874
No 126
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.3e-42 Score=347.40 Aligned_cols=205 Identities=28% Similarity=0.414 Sum_probs=173.0
Q ss_pred EEEEeEEEEeCC-eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEEE
Q 006442 98 VKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (645)
Q Consensus 98 i~i~nls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~v 166 (645)
|+++|++++|++ .++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYV 80 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEE
Confidence 478999999987 789999999999999999999999999999999999999999999998642 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.+++..|+.||+..... +. ..+.....+.+.++++.+
T Consensus 81 ~q~~~~~~~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~l 121 (242)
T cd03295 81 IQQIGLFPHMTVEENIALVPK---------------LL------------------------KWPKEKIRERADELLALV 121 (242)
T ss_pred ccCccccCCCcHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHc
Confidence 999988778999999852100 00 001112234566788888
Q ss_pred CCCc-ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHh
Q 006442 247 GFTA-DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 247 gl~~-~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~ 321 (645)
|+.. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.+.|++ .|+|||++||+++++..
T Consensus 122 ~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~ 201 (242)
T cd03295 122 GLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFR 201 (242)
T ss_pred CCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHH
Confidence 9864 367888999999999999999999999999999999999999999999888753 38999999999999999
Q ss_pred hcCeEEEEcCceeEEeccChH
Q 006442 322 LCTKIVETEMGVSRTYEGNYS 342 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~ 342 (645)
+||+|+++++|++. ..|...
T Consensus 202 ~~d~i~~l~~G~i~-~~~~~~ 221 (242)
T cd03295 202 LADRIAIMKNGEIV-QVGTPD 221 (242)
T ss_pred hCCEEEEEECCEEE-EecCHH
Confidence 99999999999984 445543
No 127
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1e-41 Score=342.21 Aligned_cols=196 Identities=24% Similarity=0.442 Sum_probs=165.9
Q ss_pred EEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------------
Q 006442 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------- 160 (645)
Q Consensus 98 i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------- 160 (645)
|+++|++++|++ .++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 789999999964 469999999999999999999999999999999999999999999987632
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..++|++|++.+++..|++||+..... .. ..+.....+++
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~---------------~~------------------------~~~~~~~~~~~ 122 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLL---------------IG------------------------KKSVKEAKERA 122 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHH---------------hc------------------------CCCHHHHHHHH
Confidence 359999999988778899999853210 00 00011123445
Q ss_pred HhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 006442 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (645)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd 315 (645)
.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.++..+.+.|++ .+.|||++|||
T Consensus 123 ~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~ 201 (221)
T TIGR02211 123 YEMLEKVGLE-HRINHRPSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHD 201 (221)
T ss_pred HHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 6778888986 567888999999999999999999999999999999999999999999988752 48899999999
Q ss_pred HHHHHhhcCeEEEEcCcee
Q 006442 316 RAFLDQLCTKIVETEMGVS 334 (645)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~ 334 (645)
++++.. ||+++++++|++
T Consensus 202 ~~~~~~-~d~v~~l~~G~i 219 (221)
T TIGR02211 202 LELAKK-LDRVLEMKDGQL 219 (221)
T ss_pred HHHHhh-cCEEEEEeCCEe
Confidence 999965 799999999875
No 128
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=9.8e-42 Score=368.04 Aligned_cols=211 Identities=30% Similarity=0.403 Sum_probs=178.0
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~v 166 (645)
+|+++|++++|+++++|+|+||+|++||+++|+||||||||||||+|+|+++|++|+|.++|.. .+|||+
T Consensus 3 ~L~~~nls~~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~v 82 (402)
T PRK09536 3 MIDVSDLSVEFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVASV 82 (402)
T ss_pred eEEEeeEEEEECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEEE
Confidence 5999999999999999999999999999999999999999999999999999999999998742 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.+++.+|++||+......... .+. .......+++.++++.+
T Consensus 83 ~q~~~l~~~~tv~e~v~~~~~~~~~----------~~~-------------------------~~~~~~~~~v~~~le~v 127 (402)
T PRK09536 83 PQDTSLSFEFDVRQVVEMGRTPHRS----------RFD-------------------------TWTETDRAAVERAMERT 127 (402)
T ss_pred ccCCCCCCCCCHHHHHHhccchhcc----------ccc-------------------------CCCHHHHHHHHHHHHHc
Confidence 9999888899999998632110000 000 00011234567888889
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhc
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~ 323 (645)
|+. +..++++.+|||||||||+|||||+++|++|||||||+|||+.++..+.++|+ +.++|||++|||++++.++|
T Consensus 128 gl~-~~~~~~~~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~a 206 (402)
T PRK09536 128 GVA-QFADRPVTSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYC 206 (402)
T ss_pred CCc-hhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhC
Confidence 986 67899999999999999999999999999999999999999999998888764 35889999999999999999
Q ss_pred CeEEEEcCceeEEeccChHHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~~ 344 (645)
|+++++++|++. ..|+.+++
T Consensus 207 drii~l~~G~iv-~~G~~~ev 226 (402)
T PRK09536 207 DELVLLADGRVR-AAGPPADV 226 (402)
T ss_pred CEEEEEECCEEE-EecCHHHH
Confidence 999999999984 56765443
No 129
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-42 Score=328.92 Aligned_cols=204 Identities=20% Similarity=0.325 Sum_probs=162.6
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCc-----cEEEEcCCCc--------
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDS-----GNVIKAKSNM-------- 161 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~-----G~I~~~~~~~-------- 161 (645)
...++++|+++.|+.+.+|+|||+.|++++++||+||+|||||||||++..+.+... |+|.++|.+.
T Consensus 5 ~~~~~~~~l~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 5 IPAIEVRDLNLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred cceeEecceeEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 346999999999999999999999999999999999999999999999999887654 9999987642
Q ss_pred ----eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 162 ----KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 162 ----~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
+||+|+|.|..++ +||+||+..+..-. .. .. ..+++
T Consensus 85 ~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~-g~-~~-------------------------------------~~lde 124 (253)
T COG1117 85 ELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLH-GI-KD-------------------------------------KELDE 124 (253)
T ss_pred HHHHHheeeccCCCCCC-chHHHHHHHhHHhh-cc-ch-------------------------------------HHHHH
Confidence 6999999998766 99999997543210 00 00 01111
Q ss_pred HHHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006442 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (645)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (645)
.++..|....+- .+.+++....||||||||++|||||+.+|+|||||||||+|||.+...+.+++.+ ..-|||+|
T Consensus 125 iVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviV 204 (253)
T COG1117 125 IVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIV 204 (253)
T ss_pred HHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEE
Confidence 111111111110 2345667889999999999999999999999999999999999998877776643 46899999
Q ss_pred ecCHHHHHhhcCeEEEEcCceeEEec
Q 006442 313 SHDRAFLDQLCTKIVETEMGVSRTYE 338 (645)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~ 338 (645)
||.+.-+.+++|+.+++..|.+..|.
T Consensus 205 THnmqQAaRvSD~taFf~~G~LvE~g 230 (253)
T COG1117 205 THNMQQAARVSDYTAFFYLGELVEFG 230 (253)
T ss_pred eCCHHHHHHHhHhhhhhcccEEEEEc
Confidence 99999999999999999999987664
No 130
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.4e-41 Score=344.83 Aligned_cols=205 Identities=23% Similarity=0.376 Sum_probs=171.8
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEEe
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLS 167 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v~ 167 (645)
+|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~ 80 (236)
T TIGR03864 1 ALEVAGLSFAYGARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVF 80 (236)
T ss_pred CEEEEeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeC
Confidence 3789999999998889999999999999999999999999999999999999999999988643 2599999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcC
Q 006442 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (645)
Q Consensus 168 Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (645)
|++.+++..|+.+|+...... . ..........+.++++.+|
T Consensus 81 q~~~~~~~~t~~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~g 121 (236)
T TIGR03864 81 QQPTLDLDLSVRQNLRYHAAL---------------H------------------------GLSRAEARERIAALLARLG 121 (236)
T ss_pred CCCCCcccCcHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHHHcC
Confidence 998887889999998521100 0 0001112334567778888
Q ss_pred CCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhc
Q 006442 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~ 323 (645)
+. ...++.+.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .|.|||++||+++++.. |
T Consensus 122 l~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~-~ 199 (236)
T TIGR03864 122 LA-ERADDKVRELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEA-D 199 (236)
T ss_pred Ch-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhh-C
Confidence 86 567888999999999999999999999999999999999999999999887742 48999999999999975 9
Q ss_pred CeEEEEcCceeEEeccChHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~ 343 (645)
|+++++++|++. ..|+.+.
T Consensus 200 d~i~~l~~G~i~-~~~~~~~ 218 (236)
T TIGR03864 200 DRLVVLHRGRVL-ADGAAAE 218 (236)
T ss_pred CEEEEEeCCeEE-EeCCHHH
Confidence 999999999974 4565443
No 131
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.5e-41 Score=356.94 Aligned_cols=206 Identities=27% Similarity=0.419 Sum_probs=179.6
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------cch
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNY 492 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~ 492 (645)
..+|+++|++++|+++.+|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 5 ~~~i~i~~l~k~~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~ 84 (306)
T PRK13537 5 VAPIDFRNVEKRYGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGV 84 (306)
T ss_pred CceEEEEeEEEEECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEE
Confidence 35799999999999888999999999999999999999999999999999999999999999998752 345
Q ss_pred hccchhhcCCCCCCHHHHHHhhhccc--c----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEE
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAEDW--R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~~~--~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 566 (645)
++|. ..+++..|+.+|+.+....+ . ..++.++++.+++. +..++++..|||||||||+|||||+.+|++||
T Consensus 85 v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~aL~~~P~lll 161 (306)
T PRK13537 85 VPQF--DNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLE-NKADAKVGELSGGMKRRLTLARALVNDPDVLV 161 (306)
T ss_pred Eecc--CcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hHhcCchhhCCHHHHHHHHHHHHHhCCCCEEE
Confidence 6654 35667889999997533211 1 23466889999995 66789999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 567 LDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 567 LDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
|||||+|||+.++..+.++|+++ +.|||++||+++++.++||||++|++|+++. .|+.+++.+.
T Consensus 162 LDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~-~g~~~~l~~~ 228 (306)
T PRK13537 162 LDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIA-EGAPHALIES 228 (306)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEE-ECCHHHHHhc
Confidence 99999999999999999999875 4699999999999999999999999999985 5777776543
No 132
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-42 Score=346.93 Aligned_cols=213 Identities=26% Similarity=0.428 Sum_probs=173.5
Q ss_pred EEEEeEEEEeCC-eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------------ceE
Q 006442 98 VKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MKI 163 (645)
Q Consensus 98 i~i~nls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-------------~~i 163 (645)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 80 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQI 80 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhcc
Confidence 478999999987 789999999999999999999999999999999999999999999988642 249
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhc
Q 006442 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (645)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (645)
+|++|++.+++..||.+|+.......... .. .+. ........+++.+++
T Consensus 81 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~------~~-~~~------------------------~~~~~~~~~~~~~~l 129 (241)
T cd03256 81 GMIFQQFNLIERLSVLENVLSGRLGRRST------WR-SLF------------------------GLFPKEEKQRALAAL 129 (241)
T ss_pred EEEcccCcccccCcHHHHHHhhhcccchh------hh-hhc------------------------ccCcHHHHHHHHHHH
Confidence 99999998878889999985321100000 00 000 000011234566778
Q ss_pred hhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHH
Q 006442 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFL 319 (645)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l 319 (645)
+.+|+. +..++++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|++ .|+|||++|||++++
T Consensus 130 ~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~ 208 (241)
T cd03256 130 ERVGLL-DKAYQRADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLA 208 (241)
T ss_pred HHcCCh-hhhCCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH
Confidence 888885 567888999999999999999999999999999999999999999999887743 489999999999999
Q ss_pred HhhcCeEEEEcCceeEEeccChHH
Q 006442 320 DQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 320 ~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
..+||+++++++|++. +.|..++
T Consensus 209 ~~~~d~v~~l~~G~i~-~~~~~~~ 231 (241)
T cd03256 209 REYADRIVGLKDGRIV-FDGPPAE 231 (241)
T ss_pred HHhCCEEEEEECCEEE-eecCHHH
Confidence 9999999999999974 4566544
No 133
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=8.6e-42 Score=347.76 Aligned_cols=214 Identities=27% Similarity=0.431 Sum_probs=174.5
Q ss_pred cEEEEeEEEEeC-CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------------ce
Q 006442 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------------MK 162 (645)
Q Consensus 97 ~i~i~nls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-------------~~ 162 (645)
+|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..
T Consensus 1 ~l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 1 MLEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred CeEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 378999999998 7789999999999999999999999999999999999999999999998642 24
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
++|++|++.+++..||.+|+.......... .. .+ . ........+++.++
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~------~~-~~-------------~-----------~~~~~~~~~~~~~~ 129 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPT------WR-SL-------------L-----------GRFSEEDKERALSA 129 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccc------hh-hh-------------h-----------ccccHHHHHHHHHH
Confidence 999999998878889999985321100000 00 00 0 00001123456677
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~ 318 (645)
++.+|+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .|+|||+|||++++
T Consensus 130 l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~ 208 (243)
T TIGR02315 130 LERVGLA-DKAYQRADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDL 208 (243)
T ss_pred HHHcCcH-hhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 8888885 567888999999999999999999999999999999999999999999887743 37899999999999
Q ss_pred HHhhcCeEEEEcCceeEEeccChHH
Q 006442 319 LDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+.++||+++++++|++. ..|+.++
T Consensus 209 ~~~~~d~v~~l~~G~i~-~~~~~~~ 232 (243)
T TIGR02315 209 AKKYADRIVGLKAGEIV-FDGAPSE 232 (243)
T ss_pred HHHhcCeEEEEECCEEE-ecCCHHH
Confidence 99999999999999974 5566544
No 134
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=345.61 Aligned_cols=207 Identities=26% Similarity=0.402 Sum_probs=175.1
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------------- 160 (645)
+|+++|++++|+++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 2 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 81 (242)
T PRK11124 2 SIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELR 81 (242)
T ss_pred EEEEEeeEEEECCeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHH
Confidence 4899999999998889999999999999999999999999999999999999999999997642
Q ss_pred ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHH
Q 006442 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (645)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (645)
..|+|++|++.+++..|+.||+....... . .........++.
T Consensus 82 ~~i~~~~q~~~~~~~~tv~e~i~~~~~~~--------------~------------------------~~~~~~~~~~~~ 123 (242)
T PRK11124 82 RNVGMVFQQYNLWPHLTVQQNLIEAPCRV--------------L------------------------GLSKDQALARAE 123 (242)
T ss_pred hheEEEecCccccCCCcHHHHHHHHHHHH--------------c------------------------CCCHHHHHHHHH
Confidence 25999999998878889999985211000 0 000111234556
Q ss_pred hhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHH
Q 006442 241 KLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRA 317 (645)
Q Consensus 241 ~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~ 317 (645)
++++.+|+. ...++.+.+||||||||++|||||+.+|++|||||||++||+.++.++.++|+ +.++|||++|||.+
T Consensus 124 ~~l~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~ 202 (242)
T PRK11124 124 KLLERLRLK-PYADRFPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE 202 (242)
T ss_pred HHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 778888986 56788899999999999999999999999999999999999999999998875 35899999999999
Q ss_pred HHHhhcCeEEEEcCceeEEeccChHH
Q 006442 318 FLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 318 ~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
++..+||+++++++|++. +.|++..
T Consensus 203 ~~~~~~d~i~~l~~g~i~-~~~~~~~ 227 (242)
T PRK11124 203 VARKTASRVVYMENGHIV-EQGDASC 227 (242)
T ss_pred HHHHhcCEEEEEECCEEE-EeCCHHH
Confidence 999999999999999984 5566554
No 135
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=354.12 Aligned_cols=208 Identities=22% Similarity=0.319 Sum_probs=173.1
Q ss_pred cEEEEeEEEEeCC-----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------- 160 (645)
.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 4899999999974 469999999999999999999999999999999999999999999998742
Q ss_pred ---ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHH
Q 006442 161 ---MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (645)
Q Consensus 161 ---~~i~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (645)
..|+|++|++. .++..|+.||+...... .........
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~---------------------------------------~~~~~~~~~ 122 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKN---------------------------------------FGFSEDEAK 122 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHH---------------------------------------cCCCHHHHH
Confidence 25999999973 23457999998522100 001112233
Q ss_pred HHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEe
Q 006442 237 AKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIIS 313 (645)
Q Consensus 237 ~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivs 313 (645)
+++.++++.+|+.....++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|+ +.|.|||++|
T Consensus 123 ~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivs 202 (287)
T PRK13641 123 EKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVT 202 (287)
T ss_pred HHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 4567788889986457789999999999999999999999999999999999999999999988775 3589999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
||++++..+||+++++++|++. ..|...++
T Consensus 203 H~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~ 232 (287)
T PRK13641 203 HNMDDVAEYADDVLVLEHGKLI-KHASPKEI 232 (287)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999973 55665443
No 136
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-41 Score=343.92 Aligned_cols=199 Identities=24% Similarity=0.453 Sum_probs=168.2
Q ss_pred ccEEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------
Q 006442 96 SGVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------- 160 (645)
++|+++|++|+|++ .++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~ 83 (233)
T PRK11629 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAE 83 (233)
T ss_pred ceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHH
Confidence 35999999999974 569999999999999999999999999999999999999999999998632
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..|+|++|++.+++..|++||+..... +. .......++
T Consensus 84 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~ 124 (233)
T PRK11629 84 LRNQKLGFIYQFHHLLPDFTALENVAMPLL---------------IG------------------------KKKPAEINS 124 (233)
T ss_pred HHhccEEEEecCcccCCCCCHHHHHHHHHH---------------hc------------------------CCCHHHHHH
Confidence 359999999988778899999853210 00 001112234
Q ss_pred HHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 006442 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (645)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivs 313 (645)
++.++++.+|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .|+|||++|
T Consensus 125 ~~~~~l~~~gl~-~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~s 203 (233)
T PRK11629 125 RALEMLAAVGLE-HRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVT 203 (233)
T ss_pred HHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 566778888986 566888999999999999999999999999999999999999999999888743 489999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeE
Q 006442 314 HDRAFLDQLCTKIVETEMGVSR 335 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~ 335 (645)
||++++..+ ++++++++|++.
T Consensus 204 H~~~~~~~~-~~~~~l~~G~i~ 224 (233)
T PRK11629 204 HDLQLAKRM-SRQLEMRDGRLT 224 (233)
T ss_pred CCHHHHHhh-CEEEEEECCEEE
Confidence 999999875 699999999873
No 137
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=9.4e-42 Score=358.31 Aligned_cols=198 Identities=29% Similarity=0.457 Sum_probs=168.4
Q ss_pred EEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEEeccCccCCC
Q 006442 105 KSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQEFEVSMS 175 (645)
Q Consensus 105 ~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v~Q~~~~~~~ 175 (645)
|+|+++++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.+ ..+||++|++.+++.
T Consensus 1 k~y~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 80 (302)
T TIGR01188 1 KVYGDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDED 80 (302)
T ss_pred CeeCCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCC
Confidence 46888889999999999999999999999999999999999999999999998743 259999999988888
Q ss_pred CCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcccccc
Q 006442 176 RTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDR 255 (645)
Q Consensus 176 ~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~ 255 (645)
+||+||+..... +. ........+++.++++.+|+. +..++
T Consensus 81 ~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~~l~-~~~~~ 120 (302)
T TIGR01188 81 LTGRENLEMMGR---------------LY------------------------GLPKDEAEERAEELLELFELG-EAADR 120 (302)
T ss_pred CcHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHcCCh-hHhCC
Confidence 999999852100 00 011112344567888999996 56789
Q ss_pred cCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEEcCc
Q 006442 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVETEMG 332 (645)
Q Consensus 256 ~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~i~~l~~G 332 (645)
++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|+ +.|+|||++||+++++.++||+|+++++|
T Consensus 121 ~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G 200 (302)
T TIGR01188 121 PVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHG 200 (302)
T ss_pred chhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999998774 35899999999999999999999999999
Q ss_pred eeEEeccChHH
Q 006442 333 VSRTYEGNYSQ 343 (645)
Q Consensus 333 ~~~~~~g~~~~ 343 (645)
++. +.|+..+
T Consensus 201 ~i~-~~g~~~~ 210 (302)
T TIGR01188 201 RII-AEGTPEE 210 (302)
T ss_pred EEE-EECCHHH
Confidence 984 5566443
No 138
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-41 Score=352.26 Aligned_cols=205 Identities=26% Similarity=0.385 Sum_probs=172.9
Q ss_pred cEEEEeEEEEeC-CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEE
Q 006442 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (645)
Q Consensus 97 ~i~i~nls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~ 165 (645)
.|+++|++|+|+ +.++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..|+|
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 83 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGL 83 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEE
Confidence 699999999996 4679999999999999999999999999999999999999999999998742 25999
Q ss_pred EeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 166 LSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 166 v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
++|++. .++..||.+|+...... ..++....++++.++++
T Consensus 84 v~q~~~~~~~~~tv~e~l~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~ 124 (274)
T PRK13647 84 VFQDPDDQVFSSTVWDDVAFGPVN---------------------------------------MGLDKDEVERRVEEALK 124 (274)
T ss_pred EecChhhhhccCcHHHHHHhhHHH---------------------------------------cCCCHHHHHHHHHHHHH
Confidence 999973 34567999998521100 00111123345667888
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHh
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~ 321 (645)
.+|+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|+ +.|+|||++|||++++.+
T Consensus 125 ~~~L~-~~~~~~~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~ 203 (274)
T PRK13647 125 AVRMW-DFRDKPPYHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAE 203 (274)
T ss_pred HCCCH-HHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 88986 67889999999999999999999999999999999999999999999988874 348999999999999999
Q ss_pred hcCeEEEEcCceeEEeccChH
Q 006442 322 LCTKIVETEMGVSRTYEGNYS 342 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~ 342 (645)
+||+|+++++|++. +.|+.+
T Consensus 204 ~~d~i~~l~~G~i~-~~g~~~ 223 (274)
T PRK13647 204 WADQVIVLKEGRVL-AEGDKS 223 (274)
T ss_pred hCCEEEEEECCEEE-EECCHH
Confidence 99999999999984 456543
No 139
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.8e-41 Score=342.22 Aligned_cols=199 Identities=27% Similarity=0.406 Sum_probs=168.4
Q ss_pred ccEEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------
Q 006442 96 SGVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------- 160 (645)
++|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 46999999999975 359999999999999999999999999999999999999999999987632
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..++|++|++.+++..|+.||+..... .. ..+.....+
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~---------------~~------------------------~~~~~~~~~ 125 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPAL---------------LR------------------------GESSRQSRN 125 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHH---------------hc------------------------CCCHHHHHH
Confidence 259999999988778899999853210 00 001112234
Q ss_pred HHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEe
Q 006442 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIIS 313 (645)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivs 313 (645)
++.++++.+|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|+ +.|.|||++|
T Consensus 126 ~~~~~l~~~~l~-~~~~~~~~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~s 204 (228)
T PRK10584 126 GAKALLEQLGLG-KRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVT 204 (228)
T ss_pred HHHHHHHHcCCH-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 566788888986 56788899999999999999999999999999999999999999999998874 3488999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeE
Q 006442 314 HDRAFLDQLCTKIVETEMGVSR 335 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~ 335 (645)
||++++.. ||+++++++|++.
T Consensus 205 H~~~~~~~-~d~i~~l~~g~i~ 225 (228)
T PRK10584 205 HDLQLAAR-CDRRLRLVNGQLQ 225 (228)
T ss_pred cCHHHHHh-CCEEEEEECCEEE
Confidence 99999865 9999999999863
No 140
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=5.9e-42 Score=342.07 Aligned_cols=200 Identities=31% Similarity=0.481 Sum_probs=165.7
Q ss_pred EEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----ceEEEEeccCccC
Q 006442 99 KLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQEFEVS 173 (645)
Q Consensus 99 ~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----~~i~~v~Q~~~~~ 173 (645)
+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|++.+.
T Consensus 1 ~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~~~ 80 (213)
T cd03235 1 EVEDLTVSYGGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRSID 80 (213)
T ss_pred CcccceeEECCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccccc
Confidence 36899999988889999999999999999999999999999999999999999999998753 3699999998653
Q ss_pred --CCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcc
Q 006442 174 --MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (645)
Q Consensus 174 --~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (645)
+..|+.||+......... .. ........+++.++++.+|+. +
T Consensus 81 ~~~~~tv~e~l~~~~~~~~~----------~~-------------------------~~~~~~~~~~~~~~l~~~~l~-~ 124 (213)
T cd03235 81 RDFPISVRDVVLMGLYGHKG----------LF-------------------------RRLSKADKAKVDEALERVGLS-E 124 (213)
T ss_pred cCCCCcHHHHHHhccccccc----------cc-------------------------cCCCHHHHHHHHHHHHHcCCH-H
Confidence 347999998532110000 00 000011234566778888886 5
Q ss_pred cccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCeEEE
Q 006442 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTKIVE 328 (645)
Q Consensus 252 ~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d~i~~ 328 (645)
..++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .+.|||++|||++++.++||++++
T Consensus 125 ~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~ 204 (213)
T cd03235 125 LADRQIGELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLL 204 (213)
T ss_pred HHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEE
Confidence 67888999999999999999999999999999999999999999999887743 578999999999999999999999
Q ss_pred EcCcee
Q 006442 329 TEMGVS 334 (645)
Q Consensus 329 l~~G~~ 334 (645)
+++|.+
T Consensus 205 l~~~~~ 210 (213)
T cd03235 205 LNRTVV 210 (213)
T ss_pred EcCcEe
Confidence 988743
No 141
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=362.61 Aligned_cols=202 Identities=28% Similarity=0.429 Sum_probs=177.9
Q ss_pred EEEEEeeeeee-CCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhc
Q 006442 424 VVTIKNLEFGY-EDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFE 494 (645)
Q Consensus 424 ~i~~~~v~~~y-~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~ 494 (645)
+|+++|++++| +++.+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+|++
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~ 82 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVF 82 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 58999999999 7788999999999999999999999999999999999999999999999998762 34566
Q ss_pred cchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEee
Q 006442 495 QNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (645)
Q Consensus 495 q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 568 (645)
|+ ..+++.+||.+|+.+.... .. ..++.++++.+++. +..++++.+|||||||||+|||||+.+|++||||
T Consensus 83 Q~--~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGq~QRvalARAL~~~P~llLLD 159 (356)
T PRK11650 83 QN--YALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELE-PLLDRKPRELSGGQRQRVAMGRAIVREPAVFLFD 159 (356)
T ss_pred CC--ccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCCh-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 54 4677889999999876431 11 24577899999994 7889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 569 EPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 569 EPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||++||+.+++.+.+.|++. +.|+|+||||++++..+||++++|++|++.. .|..+++.
T Consensus 160 EP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~-~g~~~~~~ 223 (356)
T PRK11650 160 EPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQ-IGTPVEVY 223 (356)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEE-ECCHHHHH
Confidence 999999999999999888753 5699999999999999999999999999985 46666654
No 142
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.5e-41 Score=358.07 Aligned_cols=212 Identities=21% Similarity=0.377 Sum_probs=176.6
Q ss_pred CccEEEEeEEEEeCC-------------eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-
Q 006442 95 SSGVKLENISKSYKG-------------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~~-------------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~- 160 (645)
.++|+++|++++|+. .++++||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 457999999999962 469999999999999999999999999999999999999999999998642
Q ss_pred ------------ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHH
Q 006442 161 ------------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRK 226 (645)
Q Consensus 161 ------------~~i~~v~Q~~--~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (645)
..|+|++|++ .+++.+||.+|+....... .
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~--------------~---------------------- 129 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTY--------------H---------------------- 129 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHh--------------c----------------------
Confidence 2599999998 4666789999985321100 0
Q ss_pred HHhCChhcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--
Q 006442 227 AQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK-- 304 (645)
Q Consensus 227 ~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~-- 304 (645)
..++..+..+++.++++.+|+..+..++++.+|||||||||+|||||+.+|++|||||||++||+.++..+.++|++
T Consensus 130 -~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~ 208 (331)
T PRK15079 130 -PKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQ 208 (331)
T ss_pred -cCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHH
Confidence 00111233456678888999965678999999999999999999999999999999999999999999999887742
Q ss_pred --CCCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 305 --QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 305 --~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
.+.|||+||||++++.++||+|++|.+|++. ..|...+.
T Consensus 209 ~~~~~til~iTHdl~~~~~~~dri~vl~~G~iv-e~g~~~~i 249 (331)
T PRK15079 209 REMGLSLIFIAHDLAVVKHISDRVLVMYLGHAV-ELGTYDEV 249 (331)
T ss_pred HHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EEcCHHHH
Confidence 4899999999999999999999999999884 45654443
No 143
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=345.60 Aligned_cols=208 Identities=26% Similarity=0.428 Sum_probs=174.5
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~~ 165 (645)
+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 3 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 82 (241)
T PRK10895 3 TLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGY 82 (241)
T ss_pred eEEEeCcEEEeCCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeEE
Confidence 5899999999998889999999999999999999999999999999999999999999998632 35999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.+++..|+.||+...... . . ..+....+.++.++++.
T Consensus 83 ~~q~~~~~~~~tv~enl~~~~~~-----------~---~------------------------~~~~~~~~~~~~~~l~~ 124 (241)
T PRK10895 83 LPQEASIFRRLSVYDNLMAVLQI-----------R---D------------------------DLSAEQREDRANELMEE 124 (241)
T ss_pred eccCCcccccCcHHHHHhhhhhc-----------c---c------------------------ccCHHHHHHHHHHHHHH
Confidence 99999887788999998532100 0 0 00011123445667788
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhh
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQL 322 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~ 322 (645)
+|+. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|+ +.|.|||++||+++++..+
T Consensus 125 ~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~ 203 (241)
T PRK10895 125 FHIE-HLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAV 203 (241)
T ss_pred cCCH-HHhhcchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHh
Confidence 8885 46688899999999999999999999999999999999999999998887664 4689999999999999999
Q ss_pred cCeEEEEcCceeEEeccChHHH
Q 006442 323 CTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 323 ~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
||+++++++|++. +.|+++++
T Consensus 204 ~d~v~~l~~G~i~-~~~~~~~~ 224 (241)
T PRK10895 204 CERAYIVSQGHLI-AHGTPTEI 224 (241)
T ss_pred cCEEEEEeCCeEE-eeCCHHHH
Confidence 9999999999974 55665544
No 144
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=365.27 Aligned_cols=193 Identities=24% Similarity=0.342 Sum_probs=163.8
Q ss_pred eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------------ceEEEEeccCccCCCC
Q 006442 111 TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIAFLSQEFEVSMSR 176 (645)
Q Consensus 111 ~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------------~~i~~v~Q~~~~~~~~ 176 (645)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|++.+++..
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 38999999999999999999999999999999999999999999998642 2599999999988889
Q ss_pred CHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCccccccc
Q 006442 177 TVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (645)
Q Consensus 177 Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (645)
||.||+...... ...+.....+++.++++.+|+. +..+++
T Consensus 122 Tv~enl~~~~~~---------------------------------------~~~~~~~~~~~~~e~L~~~gL~-~~~~~~ 161 (400)
T PRK10070 122 TVLDNTAFGMEL---------------------------------------AGINAEERREKALDALRQVGLE-NYAHSY 161 (400)
T ss_pred CHHHHHHHHHHh---------------------------------------cCCCHHHHHHHHHHHHHHcCCC-hhhhcC
Confidence 999998532110 0011112234567788899996 578899
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcCeEEEEcCc
Q 006442 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCTKIVETEMG 332 (645)
Q Consensus 257 ~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~d~i~~l~~G 332 (645)
+.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|+ +.++|||+||||++++..+||+|++|++|
T Consensus 162 ~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G 241 (400)
T PRK10070 162 PDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNG 241 (400)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999988774 25899999999999999999999999999
Q ss_pred eeEEeccChHHH
Q 006442 333 VSRTYEGNYSQY 344 (645)
Q Consensus 333 ~~~~~~g~~~~~ 344 (645)
++. ..|...++
T Consensus 242 ~i~-~~g~~~~l 252 (400)
T PRK10070 242 EVV-QVGTPDEI 252 (400)
T ss_pred EEE-ecCCHHHH
Confidence 984 45655443
No 145
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.9e-42 Score=339.20 Aligned_cols=192 Identities=29% Similarity=0.451 Sum_probs=167.1
Q ss_pred EEEeeeeeeCC-eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-------cchhccch
Q 006442 426 TIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------PNYFEQNQ 497 (645)
Q Consensus 426 ~~~~v~~~y~~-~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------~~~~~q~~ 497 (645)
+++|+++.|++ +.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+.
T Consensus 1 ~~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~~ 80 (205)
T cd03226 1 RIENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQDV 80 (205)
T ss_pred CcccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecCh
Confidence 36899999987 78999999999999999999999999999999999999999999999998752 34556553
Q ss_pred hhcCCCCCCHHHHHHhhhcc--ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCC
Q 006442 498 AEALDLDKTVLETVAEAAED--WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 575 (645)
Q Consensus 498 ~~~l~~~~tv~e~v~~~~~~--~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD 575 (645)
.. ..+..|+.+|+...... ....++.++++.+++. +..++++.+||||||||++|||||+.+|++|||||||++||
T Consensus 81 ~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 81 DY-QLFTDSVREELLLGLKELDAGNEQAETVLKDLDLY-ALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred hh-hhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCc-hhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 21 22467999999764322 2234678899999995 66789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEE
Q 006442 576 IPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQ 619 (645)
Q Consensus 576 ~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~ 619 (645)
+.+++.+.+.|+++ +.|||+||||++++.++||++++|++|+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999865 469999999999999999999999999874
No 146
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-41 Score=356.36 Aligned_cols=210 Identities=17% Similarity=0.264 Sum_probs=173.7
Q ss_pred CccEEEEeEEEEeCC-----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------
Q 006442 95 SSGVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------- 160 (645)
.+.|+++|++|+|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 19 ~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~ 98 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHE 98 (320)
T ss_pred CceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccc
Confidence 457999999999964 359999999999999999999999999999999999999999999987521
Q ss_pred -----------------ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHH
Q 006442 161 -----------------MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDL 222 (645)
Q Consensus 161 -----------------~~i~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (645)
..|+||+|++. ..+..||.||+...... .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~--------------~------------------- 145 (320)
T PRK13631 99 LITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVA--------------L------------------- 145 (320)
T ss_pred ccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHh--------------c-------------------
Confidence 24999999983 23456999998532100 0
Q ss_pred HHHHHHhCChhcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH
Q 006442 223 LQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL 302 (645)
Q Consensus 223 ~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L 302 (645)
..+.....+++.++++.+|+.....++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|
T Consensus 146 ------~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L 219 (320)
T PRK13631 146 ------GVKKSEAKKLAKFYLNKMGLDDSYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLI 219 (320)
T ss_pred ------CCCHHHHHHHHHHHHHHcCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHH
Confidence 01111233456677888898645678889999999999999999999999999999999999999999998877
Q ss_pred c---cCCCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 303 G---KQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 303 ~---~~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+ +.|.|||+||||++++..+||+|++|++|++. ..|+..++
T Consensus 220 ~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~-~~g~~~~~ 263 (320)
T PRK13631 220 LDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKIL-KTGTPYEI 263 (320)
T ss_pred HHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 4 35899999999999999999999999999984 55765544
No 147
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.3e-41 Score=362.86 Aligned_cols=200 Identities=24% Similarity=0.324 Sum_probs=171.1
Q ss_pred EEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------------ceEEEEeccC
Q 006442 105 KSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIAFLSQEF 170 (645)
Q Consensus 105 ~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------------~~i~~v~Q~~ 170 (645)
|.|+++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+||+|++
T Consensus 1 ~~~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~ 80 (363)
T TIGR01186 1 KKTGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQF 80 (363)
T ss_pred CccCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCC
Confidence 46788889999999999999999999999999999999999999999999998742 3699999999
Q ss_pred ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCc
Q 006442 171 EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTA 250 (645)
Q Consensus 171 ~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~ 250 (645)
++++.+||+||+...... ...+.....+++.++++.+|+.
T Consensus 81 ~l~~~~TV~eNi~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~~vgL~- 120 (363)
T TIGR01186 81 ALFPHMTILQNTSLGPEL---------------------------------------LGWPEQERKEKALELLKLVGLE- 120 (363)
T ss_pred cCCCCCCHHHHHHHHHHH---------------------------------------cCCCHHHHHHHHHHHHHhcCCc-
Confidence 999999999998532100 0011123345677888999996
Q ss_pred ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHHhhcCeE
Q 006442 251 DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLDQLCTKI 326 (645)
Q Consensus 251 ~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~~~~d~i 326 (645)
...++++.+|||||||||+|||||+.+|+||||||||++||+.+++++.+.|. +.++|||+||||++++..+||+|
T Consensus 121 ~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI 200 (363)
T TIGR01186 121 EYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRI 200 (363)
T ss_pred hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEE
Confidence 67899999999999999999999999999999999999999999999988763 34899999999999999999999
Q ss_pred EEEcCceeEEeccChHHHH
Q 006442 327 VETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 327 ~~l~~G~~~~~~g~~~~~~ 345 (645)
++|++|++. ..|..++++
T Consensus 201 ~vl~~G~iv-~~g~~~ei~ 218 (363)
T TIGR01186 201 VIMKAGEIV-QVGTPDEIL 218 (363)
T ss_pred EEEeCCEEE-eeCCHHHHH
Confidence 999999974 556655543
No 148
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=360.94 Aligned_cols=204 Identities=27% Similarity=0.453 Sum_probs=179.5
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchh
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYF 493 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~ 493 (645)
..+|+++|+++.|+++.+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+|+
T Consensus 4 ~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v 83 (351)
T PRK11432 4 KNFVVLKNITKRFGSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMV 83 (351)
T ss_pred CcEEEEEeEEEEECCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 45799999999999888999999999999999999999999999999999999999999999998762 2455
Q ss_pred ccchhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEe
Q 006442 494 EQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 567 (645)
+|+ ..+++.+|+.+|+.+.... ...+++.++++.+++. ++.++++.+|||||||||+|||||+.+|++|||
T Consensus 84 fQ~--~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~-~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLLL 160 (351)
T PRK11432 84 FQS--YALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLA-GFEDRYVDQISGGQQQRVALARALILKPKVLLF 160 (351)
T ss_pred eCC--cccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 554 4677889999999876431 1134678899999994 678999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 568 DEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 568 DEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||++||+.++..+.+.|++. +.|+|+||||.+++..+||||++|++|++.. .|+.+++.
T Consensus 161 DEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~-~g~~~~~~ 225 (351)
T PRK11432 161 DEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQ-IGSPQELY 225 (351)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHH
Confidence 9999999999999999988753 5699999999999999999999999999986 46666553
No 149
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=352.98 Aligned_cols=207 Identities=24% Similarity=0.385 Sum_probs=172.4
Q ss_pred EEEEeEEEEeCC-----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------------
Q 006442 98 VKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (645)
Q Consensus 98 i~i~nls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------ 160 (645)
|+++|++|+|++ .++|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 899999999964 359999999999999999999999999999999999999999999998742
Q ss_pred --ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 --MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 --~~i~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..||||+|++. ..+..||.||+...... ...+.....+
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~---------------------------------------~~~~~~~~~~ 123 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKN---------------------------------------FKMNLDEVKN 123 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHH---------------------------------------cCCCHHHHHH
Confidence 25899999973 22345999998522100 0011122344
Q ss_pred HHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 006442 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (645)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivs 313 (645)
++.+++..+|+..+..++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .|.|||+||
T Consensus 124 ~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vt 203 (286)
T PRK13646 124 YAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVS 203 (286)
T ss_pred HHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 5677888899964567888999999999999999999999999999999999999999999888752 489999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
||++++..+||+|+++++|++. ..|...+.
T Consensus 204 H~~~~~~~~~dri~~l~~G~i~-~~g~~~~~ 233 (286)
T PRK13646 204 HDMNEVARYADEVIVMKEGSIV-SQTSPKEL 233 (286)
T ss_pred cCHHHHHHhCCEEEEEECCEEE-EECCHHHH
Confidence 9999999999999999999984 55665544
No 150
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.2e-41 Score=343.17 Aligned_cols=202 Identities=26% Similarity=0.414 Sum_probs=165.6
Q ss_pred cEEEEeEEEEeCCe----eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------------
Q 006442 97 GVKLENISKSYKGV----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------ 160 (645)
+|+++|++++|++. ++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIR 80 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHh
Confidence 37899999999765 79999999999999999999999999999999999999999999987632
Q ss_pred -ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 -MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 -~~i~~v~Q~~--~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..++|++|++ .+.+..||++|+....... .. .. .....+.
T Consensus 81 ~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~--------------~~--~~---------------------~~~~~~~ 123 (228)
T cd03257 81 RKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIH--------------GK--LS---------------------KKEARKE 123 (228)
T ss_pred hccEEEEecCchhhcCCcCCHHHHHHHHHHhc--------------cC--Cc---------------------HHHHHHH
Confidence 2599999998 3556789999985321100 00 00 0000011
Q ss_pred HHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 006442 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (645)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivs 313 (645)
.+.++++.+++.....++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .|.|||++|
T Consensus 124 ~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~s 203 (228)
T cd03257 124 AVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFIT 203 (228)
T ss_pred HHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 1235677778754567888999999999999999999999999999999999999999999988753 389999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeE
Q 006442 314 HDRAFLDQLCTKIVETEMGVSR 335 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~ 335 (645)
||++++..+||+|+++++|++.
T Consensus 204 H~~~~~~~~~d~i~~l~~G~i~ 225 (228)
T cd03257 204 HDLGVVAKIADRVAVMYAGKIV 225 (228)
T ss_pred CCHHHHHHhcCeEEEEeCCEEE
Confidence 9999999999999999999873
No 151
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-41 Score=346.87 Aligned_cols=197 Identities=28% Similarity=0.425 Sum_probs=172.8
Q ss_pred CCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceec-----ccchhcc
Q 006442 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV-----LPNYFEQ 495 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~-----~~~~~~q 495 (645)
.+++|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++ ..+|++|
T Consensus 9 ~~~~l~i~~l~~~~~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~q 88 (257)
T PRK11247 9 QGTPLLLNAVSKRYGERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMFQ 88 (257)
T ss_pred CCCcEEEEEEEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEec
Confidence 35679999999999988899999999999999999999999999999999999999999999998764 2346665
Q ss_pred chhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCC
Q 006442 496 NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 575 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD 575 (645)
+. .+.+..|+.+|+..........++.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||++||
T Consensus 89 ~~--~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGqkqrl~laraL~~~p~lllLDEPt~~LD 165 (257)
T PRK11247 89 DA--RLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLA-DRANEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALD 165 (257)
T ss_pred Cc--cCCCCCcHHHHHHhcccchHHHHHHHHHHHcCCh-hHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCC
Confidence 43 4556689999997653221235678899999995 66789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 576 IPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 576 ~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++.
T Consensus 166 ~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 166 ALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999988754 5699999999999999999999999999975
No 152
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.5e-41 Score=360.85 Aligned_cols=204 Identities=26% Similarity=0.428 Sum_probs=179.6
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhc
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFE 494 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~ 494 (645)
.+|+++|++++|+++.+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+|++
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~ 82 (353)
T TIGR03265 3 PYLSIDNIRKRFGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVF 82 (353)
T ss_pred cEEEEEEEEEEeCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 3699999999999888999999999999999999999999999999999999999999999998763 24555
Q ss_pred cchhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEee
Q 006442 495 QNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (645)
Q Consensus 495 q~~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 568 (645)
|+ ..+++.+||.+|+.++... ....++.++++.+++. +..++++.+|||||||||+|||||+.+|++||||
T Consensus 83 Q~--~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~-~~~~~~~~~LSgGq~QRvaLARaL~~~P~llLLD 159 (353)
T TIGR03265 83 QS--YALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLP-GSERKYPGQLSGGQQQRVALARALATSPGLLLLD 159 (353)
T ss_pred CC--cccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 54 4677889999999876432 1234678899999994 6889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 569 EPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 569 EPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|||++||+.++..+.+.|++. +.|+|+||||++++..+|||+++|++|++... |+.+++.+
T Consensus 160 EP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~-g~~~~~~~ 224 (353)
T TIGR03265 160 EPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQV-GTPQEIYR 224 (353)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEE-cCHHHHHh
Confidence 999999999999999988753 56999999999999999999999999999864 66665543
No 153
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.9e-41 Score=340.41 Aligned_cols=201 Identities=25% Similarity=0.397 Sum_probs=165.8
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEEEE
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFL 166 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~~v 166 (645)
|+++|++++|++.++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (222)
T cd03224 1 LEVENLNAGYGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGYV 80 (222)
T ss_pred CEEeeEEeecCCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEEe
Confidence 478999999998889999999999999999999999999999999999999999999987632 249999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.+++..|+++|+....... . ......++.++++.+
T Consensus 81 ~q~~~~~~~~t~~~~l~~~~~~~-~----------------------------------------~~~~~~~~~~~l~~~ 119 (222)
T cd03224 81 PEGRRIFPELTVEENLLLGAYAR-R----------------------------------------RAKRKARLERVYELF 119 (222)
T ss_pred ccccccCCCCcHHHHHHHHhhhc-C----------------------------------------chhHHHHHHHHHHHH
Confidence 99998878889999985321100 0 000112223334444
Q ss_pred -CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhh
Q 006442 247 -GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQL 322 (645)
Q Consensus 247 -gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~ 322 (645)
++. ...++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .++|||++|||++++..+
T Consensus 120 ~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~ 198 (222)
T cd03224 120 PRLK-ERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEI 198 (222)
T ss_pred Hhhh-hhhhCchhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHh
Confidence 232 456788999999999999999999999999999999999999999999988753 578999999999999999
Q ss_pred cCeEEEEcCceeEEeccCh
Q 006442 323 CTKIVETEMGVSRTYEGNY 341 (645)
Q Consensus 323 ~d~i~~l~~G~~~~~~g~~ 341 (645)
||+++++++|++. ..|+.
T Consensus 199 ~d~i~~l~~G~i~-~~~~~ 216 (222)
T cd03224 199 ADRAYVLERGRVV-LEGTA 216 (222)
T ss_pred ccEEEEeeCCeEE-EeCCH
Confidence 9999999999874 44543
No 154
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.4e-41 Score=344.33 Aligned_cols=208 Identities=21% Similarity=0.297 Sum_probs=172.8
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCC-----ccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD-----SGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~-----~G~I~~~~~~----------- 160 (645)
+|+++|++++|++.++++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~ 80 (247)
T TIGR00972 1 AIEIENLNLFYGEKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVEL 80 (247)
T ss_pred CEEEEEEEEEECCeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHH
Confidence 488999999999888999999999999999999999999999999999999998 9999987642
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..++|++|++.+++ .|++||+...+.. .. ........+++
T Consensus 81 ~~~i~~v~q~~~~~~-~tv~e~l~~~~~~---------------~~-----------------------~~~~~~~~~~~ 121 (247)
T TIGR00972 81 RRRVGMVFQKPNPFP-MSIYDNIAYGPRL---------------HG-----------------------IKDKKELDEIV 121 (247)
T ss_pred HhheEEEecCcccCC-CCHHHHHHhHHHh---------------cC-----------------------CCCHHHHHHHH
Confidence 25999999998876 9999998532110 00 00111223456
Q ss_pred HhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006442 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (645)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (645)
.++++.+|+.. +..++++.+||||||||++|||||+.+|++|||||||++||+.++..+.++|++ .++|||++||
T Consensus 122 ~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH 201 (247)
T TIGR00972 122 EESLKKAALWDEVKDRLHDSALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTH 201 (247)
T ss_pred HHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEec
Confidence 67788888852 456788999999999999999999999999999999999999999999988753 2589999999
Q ss_pred CHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+++++..+||++++|++|++. ..|+.+++
T Consensus 202 ~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 230 (247)
T TIGR00972 202 NMQQAARISDRTAFFYDGELV-EYGPTEQI 230 (247)
T ss_pred CHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999999999974 44554443
No 155
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.8e-42 Score=319.44 Aligned_cols=207 Identities=23% Similarity=0.377 Sum_probs=175.9
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCc--------eEEEEecc
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM--------KIAFLSQE 169 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~--------~i~~v~Q~ 169 (645)
|.++++.|+|+..+. .++++|+.||+++|+||+||||||||++|+|+..|.+|+|.++|.+. -+++++|+
T Consensus 2 l~L~~V~~~y~~~~~--~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlFQE 79 (231)
T COG3840 2 LALDDVRFSYGHLPM--RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLFQE 79 (231)
T ss_pred ccccceEEeeCcceE--EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhhhc
Confidence 678999999987653 36789999999999999999999999999999999999999987642 49999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCC
Q 006442 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (645)
Q Consensus 170 ~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (645)
.+++..+||.+|+-.+........ ..-+++++..+..+|+.
T Consensus 80 nNLFaHLtV~qNigLGl~P~LkL~---------------------------------------a~~r~~v~~aa~~vGl~ 120 (231)
T COG3840 80 NNLFAHLTVAQNIGLGLSPGLKLN---------------------------------------AEQREKVEAAAAQVGLA 120 (231)
T ss_pred cccchhhhhhhhhcccCCcccccC---------------------------------------HHHHHHHHHHHHHhChh
Confidence 999999999999965443321110 01135666778888996
Q ss_pred cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhhcCe
Q 006442 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQLCTK 325 (645)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~~~d~ 325 (645)
...+|.+.+|||||||||||||+|+++-+||||||||++|||.-+..+..++ .+.+.|++||||.++++.+++++
T Consensus 121 -~~~~RLP~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~ 199 (231)
T COG3840 121 -GFLKRLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADR 199 (231)
T ss_pred -hHhhhCccccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhc
Confidence 6889999999999999999999999999999999999999999988877654 46789999999999999999999
Q ss_pred EEEEcCceeEEeccChHHHHHH
Q 006442 326 IVETEMGVSRTYEGNYSQYVLE 347 (645)
Q Consensus 326 i~~l~~G~~~~~~g~~~~~~~~ 347 (645)
++++++|++ .+.|...+++..
T Consensus 200 ~~fl~~Gri-~~~g~~~~~~~~ 220 (231)
T COG3840 200 VVFLDNGRI-AAQGSTQELLSG 220 (231)
T ss_pred eEEEeCCEE-EeeccHHHHhcc
Confidence 999999998 577776655443
No 156
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-42 Score=334.95 Aligned_cols=221 Identities=29% Similarity=0.410 Sum_probs=186.0
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCc-----------eEE
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-----------KIA 164 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~-----------~i~ 164 (645)
+.+++++++++||+-.+++||||+|++||+++||||||||||||+++|+|.++|++|+|.+.|.++ .|+
T Consensus 3 ~lL~v~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 3 PLLEVRGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred ceeeeccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 458899999999999999999999999999999999999999999999999999999999988643 589
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
.-||.+.+++++||.||++.+...... +...+... ...-...++.++..++|+
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~-------~~~~l~~~--------------------~~~~~e~~~~e~A~~~Le 135 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLG-------LSGLLGRP--------------------RARKEEREARERARELLE 135 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhh-------hhhhhccc--------------------cchhhHHHHHHHHHHHHH
Confidence 999999999999999999754321100 00111000 000112345677888999
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---c-CCCeEEEEecCHHHHH
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---K-QDVPMVIISHDRAFLD 320 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~-~g~tvIivsHd~~~l~ 320 (645)
.+|+. +..+++..+||+|||+|+.|||||+.+|++||||||.+||.+.....+.++++ + .|.||++|.||++.+.
T Consensus 136 ~vgL~-~~a~~~A~~LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm 214 (250)
T COG0411 136 FVGLG-ELADRPAGNLSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVM 214 (250)
T ss_pred HcCCc-hhhcchhhcCChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHh
Confidence 99997 78899999999999999999999999999999999999999999998888764 3 5699999999999999
Q ss_pred hhcCeEEEEcCceeEEeccChHHHH
Q 006442 321 QLCTKIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~g~~~~~~ 345 (645)
.+||||++|+.|++ ...|++.+..
T Consensus 215 ~l~dri~Vl~~G~~-IAeG~P~eV~ 238 (250)
T COG0411 215 GLADRIVVLNYGEV-IAEGTPEEVR 238 (250)
T ss_pred hhccEEEeccCCcC-cccCCHHHHh
Confidence 99999999999987 5778876643
No 157
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-41 Score=338.68 Aligned_cols=198 Identities=28% Similarity=0.375 Sum_probs=171.2
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------cchhcc
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFEQ 495 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~~q 495 (645)
|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 1 i~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (220)
T cd03265 1 IEVENLVKKYGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVFQ 80 (220)
T ss_pred CEEEEEEEEECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEecC
Confidence 57899999999888999999999999999999999999999999999999999999999997652 234555
Q ss_pred chhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeC
Q 006442 496 NQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 569 (645)
+ ..+.+..|+.+|+...... . ...++.++++.+++. +..++++.+|||||||||+||||++.+|++|||||
T Consensus 81 ~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qr~~la~al~~~p~llllDE 157 (220)
T cd03265 81 D--LSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLL-EAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLDE 157 (220)
T ss_pred C--ccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 4 3455678999999764221 1 123578899999994 66789999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChh
Q 006442 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (645)
Q Consensus 570 Pt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~ 626 (645)
||++||+.+++.+.+.|.+. +.|||+||||++++..+|||+++|++|++... ++.+
T Consensus 158 Pt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~-~~~~ 217 (220)
T cd03265 158 PTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAE-GTPE 217 (220)
T ss_pred CccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEe-CChH
Confidence 99999999999999998753 56999999999999999999999999999853 4443
No 158
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.1e-41 Score=341.44 Aligned_cols=198 Identities=23% Similarity=0.396 Sum_probs=165.9
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCC-----CCCccEEEEcCCC------------
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE-----EPDSGNVIKAKSN------------ 160 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~-----~p~~G~I~~~~~~------------ 160 (645)
|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|++ +|++|+|.++|..
T Consensus 1 i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (227)
T cd03260 1 IELRDLNVYYGDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLELR 80 (227)
T ss_pred CEEEEEEEEcCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHHH
Confidence 57899999998888999999999999999999999999999999999999 9999999998742
Q ss_pred ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHH
Q 006442 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (645)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (645)
..++|++|++.++ ..||+||+...... .. .......++++.
T Consensus 81 ~~i~~~~q~~~~~-~~tv~e~l~~~~~~---------------~~-----------------------~~~~~~~~~~~~ 121 (227)
T cd03260 81 RRVGMVFQKPNPF-PGSIYDNVAYGLRL---------------HG-----------------------IKLKEELDERVE 121 (227)
T ss_pred hhEEEEecCchhc-cccHHHHHHhHHHh---------------cC-----------------------CCcHHHHHHHHH
Confidence 2599999998876 78999998532110 00 000011234566
Q ss_pred hhchhcCCCccccccc--CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccC--CCeEEEEecCH
Q 006442 241 KLMPELGFTADDGDRL--VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQ--DVPMVIISHDR 316 (645)
Q Consensus 241 ~ll~~lgl~~~~~~~~--~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~--g~tvIivsHd~ 316 (645)
++++.+|+. +..++. +.+||||||||++|||||+.+|++|||||||++||+.++.++.++|++. ..|||++|||+
T Consensus 122 ~~l~~~~l~-~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~ 200 (227)
T cd03260 122 EALRKAALW-DEVKDRLHALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNM 200 (227)
T ss_pred HHHHHcCCC-hHHhccCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccH
Confidence 778888886 344555 5999999999999999999999999999999999999999999887531 27999999999
Q ss_pred HHHHhhcCeEEEEcCceeE
Q 006442 317 AFLDQLCTKIVETEMGVSR 335 (645)
Q Consensus 317 ~~l~~~~d~i~~l~~G~~~ 335 (645)
+++..+||+++++++|++.
T Consensus 201 ~~~~~~~d~i~~l~~G~i~ 219 (227)
T cd03260 201 QQAARVADRTAFLLNGRLV 219 (227)
T ss_pred HHHHHhCCEEEEEeCCEEE
Confidence 9999999999999999874
No 159
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-41 Score=343.27 Aligned_cols=202 Identities=23% Similarity=0.352 Sum_probs=170.3
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~v 166 (645)
.|+++|++|+|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|+
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~~ 82 (241)
T PRK14250 3 EIEFKEVSYSSFGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGMV 82 (241)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEEE
Confidence 4899999999988889999999999999999999999999999999999999999999998742 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.++. .|+.+|+...... . . ....++.++++.+
T Consensus 83 ~q~~~~~~-~tv~e~l~~~~~~---------------~--------------------------~--~~~~~~~~~l~~~ 118 (241)
T PRK14250 83 FQQPHLFE-GTVKDNIEYGPML---------------K--------------------------G--EKNVDVEYYLSIV 118 (241)
T ss_pred ecCchhch-hhHHHHHhcchhh---------------c--------------------------C--cHHHHHHHHHHHc
Confidence 99987754 6999997521100 0 0 0012345667778
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhh
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQL 322 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~ 322 (645)
|+..+..++.+.+||||||||++|||||+.+|++|||||||++||+.+++++.+.|++ .|.|||++|||++++..+
T Consensus 119 ~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~ 198 (241)
T PRK14250 119 GLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRI 198 (241)
T ss_pred CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHh
Confidence 8854567888999999999999999999999999999999999999999999887753 489999999999999999
Q ss_pred cCeEEEEcCceeEEeccChHH
Q 006442 323 CTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 323 ~d~i~~l~~G~~~~~~g~~~~ 343 (645)
||+|+++++|++. ..|...+
T Consensus 199 ~d~i~~l~~G~i~-~~~~~~~ 218 (241)
T PRK14250 199 GDYTAFLNKGILV-EYAKTYD 218 (241)
T ss_pred CCEEEEEeCCEEE-EeCCHHH
Confidence 9999999999984 3344333
No 160
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.3e-41 Score=342.46 Aligned_cols=215 Identities=29% Similarity=0.429 Sum_probs=176.3
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~~ 165 (645)
+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 2 ~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 81 (242)
T TIGR03411 2 ILYLEGLSVSFDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIGR 81 (242)
T ss_pred eEEEEeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCeeE
Confidence 5899999999988889999999999999999999999999999999999999999999998742 24999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.+++..|+.||+......... +...+ ........+.++.++++.
T Consensus 82 ~~q~~~~~~~~tv~~nl~~~~~~~~~-------~~~~~------------------------~~~~~~~~~~~~~~~l~~ 130 (242)
T TIGR03411 82 KFQKPTVFENLTVFENLELALPRDKS-------VFASL------------------------FFRLSAEEKDRIEEVLET 130 (242)
T ss_pred eccccccCCCCCHHHHHHHhhhcccc-------ccccc------------------------ccccHHHHHHHHHHHHHH
Confidence 99999888888999998532110000 00000 000001123456778888
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhc
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~ 323 (645)
+|+. +..++.+.+|||||||||+|||||+.+|++|||||||++||+.++..+.++|++ .++|||++||+++++..+|
T Consensus 131 ~~l~-~~~~~~~~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~ 209 (242)
T TIGR03411 131 IGLA-DEADRLAGLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIA 209 (242)
T ss_pred cCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhC
Confidence 8986 567888999999999999999999999999999999999999999999988753 3689999999999999999
Q ss_pred CeEEEEcCceeEEeccChHHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~~ 344 (645)
|+|+++++|++. ..|+..++
T Consensus 210 d~i~~l~~g~~~-~~~~~~~~ 229 (242)
T TIGR03411 210 DKVTVLHQGSVL-AEGSLDQV 229 (242)
T ss_pred CEEEEEECCeEE-eeCCHHHH
Confidence 999999999974 55665544
No 161
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-41 Score=345.82 Aligned_cols=206 Identities=29% Similarity=0.394 Sum_probs=173.1
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~v 166 (645)
+|+++|++++|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (258)
T PRK13548 2 MLEARNLSVRLGGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAVL 81 (258)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEEE
Confidence 4899999999998889999999999999999999999999999999999999999999998742 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.+++..||+||+....... .........++.++++.+
T Consensus 82 ~q~~~~~~~~tv~e~l~~~~~~~---------------------------------------~~~~~~~~~~~~~~l~~~ 122 (258)
T PRK13548 82 PQHSSLSFPFTVEEVVAMGRAPH---------------------------------------GLSRAEDDALVAAALAQV 122 (258)
T ss_pred ccCCcCCCCCCHHHHHHhhhccc---------------------------------------CCCcHHHHHHHHHHHHHc
Confidence 99988878889999985321000 000011223456778888
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHc------cCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCH
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILL------QDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDR 316 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~------~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~ 316 (645)
|+. +..++.+.+|||||||||+|||||+ .+|++|||||||++||+.+++.+.++|+ +.|.|||++|||+
T Consensus 123 ~l~-~~~~~~~~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~ 201 (258)
T PRK13548 123 DLA-HLAGRDYPQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDL 201 (258)
T ss_pred CCH-hHhcCCcccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCH
Confidence 885 5678889999999999999999999 5999999999999999999998888764 4588999999999
Q ss_pred HHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 317 AFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 317 ~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+++..+||+|+++++|++. ..|...+
T Consensus 202 ~~~~~~~d~i~~l~~G~i~-~~~~~~~ 227 (258)
T PRK13548 202 NLAARYADRIVLLHQGRLV-ADGTPAE 227 (258)
T ss_pred HHHHHhcCEEEEEECCEEE-eeCCHHH
Confidence 9999999999999999874 4565443
No 162
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=5e-41 Score=353.01 Aligned_cols=205 Identities=26% Similarity=0.409 Sum_probs=176.9
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------cch
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNY 492 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~ 492 (645)
..+|+++|++++|+++.+|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 2 ~~~i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~ 81 (303)
T TIGR01288 2 NVAIDLVGVSKSYGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGV 81 (303)
T ss_pred CcEEEEEeEEEEeCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEE
Confidence 34799999999999888999999999999999999999999999999999999999999999997652 245
Q ss_pred hccchhhcCCCCCCHHHHHHhhhc--ccc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEE
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAE--DWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~--~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 566 (645)
++|+ ..+.+..|+.+|+..... ... ...+..+++.+++. +..++++.+|||||||||+|||||+.+|++||
T Consensus 82 v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lll 158 (303)
T TIGR01288 82 VPQF--DNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLE-SKADVRVALLSGGMKRRLTLARALINDPQLLI 158 (303)
T ss_pred Eecc--ccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCh-hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 5554 345667899999974321 111 13456789999994 66789999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 567 LDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 567 LDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|||||+|||+.++..+.+.|+++ +.|||++|||++++.++|||+++|++|++.. .|+.+++.+
T Consensus 159 LDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 224 (303)
T TIGR01288 159 LDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIA-EGRPHALID 224 (303)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHh
Confidence 99999999999999999999875 5699999999999999999999999999975 577776654
No 163
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4.3e-41 Score=344.59 Aligned_cols=207 Identities=25% Similarity=0.425 Sum_probs=174.1
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------------
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------------- 160 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------------- 160 (645)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 1 i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~~ 80 (252)
T TIGR03005 1 VRFSDVTKRFGILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADEK 80 (252)
T ss_pred CEEEEEEEEeCCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccchh
Confidence 478999999988889999999999999999999999999999999999999999999987632
Q ss_pred ------ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhc
Q 006442 161 ------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDT 234 (645)
Q Consensus 161 ------~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (645)
..++|++|++.+++..|+.+|+....... . .+....
T Consensus 81 ~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--------------~------------------------~~~~~~ 122 (252)
T TIGR03005 81 HLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--------------L------------------------GMARAE 122 (252)
T ss_pred HHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--------------c------------------------CCCHHH
Confidence 25999999998888899999985321000 0 001112
Q ss_pred HHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEE
Q 006442 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMV 310 (645)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvI 310 (645)
.+.++.++++.+|+. +..++.+.+||||||||++|||||+.+|++|||||||++||+.++.++.++|++ .|.|||
T Consensus 123 ~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii 201 (252)
T TIGR03005 123 AEKRAMELLDMVGLA-DKADHMPAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTML 201 (252)
T ss_pred HHHHHHHHHHHcCCh-hHhhcChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEE
Confidence 234566778888886 567888999999999999999999999999999999999999999999887743 489999
Q ss_pred EEecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 311 ivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
++||+++++..+||+++++++|++. ..|+..++
T Consensus 202 ivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 234 (252)
T TIGR03005 202 LVTHEMGFAREFADRVCFFDKGRIV-EQGKPDEI 234 (252)
T ss_pred EEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999999984 55665544
No 164
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=4.9e-41 Score=356.88 Aligned_cols=207 Identities=26% Similarity=0.389 Sum_probs=179.7
Q ss_pred CCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------cc
Q 006442 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PN 491 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~ 491 (645)
+..+|+++|++++|+++.+|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 38 ~~~~i~i~nl~k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ig 117 (340)
T PRK13536 38 STVAIDLAGVSKSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARARIG 117 (340)
T ss_pred CceeEEEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhccEE
Confidence 356799999999999889999999999999999999999999999999999999999999999998753 24
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeE
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 565 (645)
|++|+ ..+.+..|+.+|+...... .. ...+.++++.+++. +..++++.+|||||||||+||+||+.+|++|
T Consensus 118 ~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~-~~~~~~~~~LS~G~kqrv~lA~aL~~~P~lL 194 (340)
T PRK13536 118 VVPQF--DNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLE-SKADARVSDLSGGMKRRLTLARALINDPQLL 194 (340)
T ss_pred EEeCC--ccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhCCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 55554 3566788999999753221 11 23456789999995 6679999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 566 lLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
||||||+|||+.++..+.++|+++ +.|||++||+++++.++||||++|++|+++. .|+.+++.+.
T Consensus 195 iLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~-~g~~~~l~~~ 262 (340)
T PRK13536 195 ILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIA-EGRPHALIDE 262 (340)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHhh
Confidence 999999999999999999999875 4699999999999999999999999999984 5777776543
No 165
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.8e-41 Score=342.20 Aligned_cols=212 Identities=25% Similarity=0.317 Sum_probs=172.8
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCC--CCCccEEEEcCCC-----------ceEE
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EPDSGNVIKAKSN-----------MKIA 164 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~--~p~~G~I~~~~~~-----------~~i~ 164 (645)
|+++|++++|++..+|+|+||+|++|++++|+||||||||||+++|+|++ +|++|+|.++|.+ ..++
T Consensus 1 l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (243)
T TIGR01978 1 LKIKDLHVSVEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLF 80 (243)
T ss_pred CeEeeEEEEECCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceE
Confidence 47899999999888999999999999999999999999999999999995 7999999998742 2389
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
|++|++.+++..|+.+|+........ ..... ...+.....+++.++++
T Consensus 81 ~v~q~~~~~~~~t~~~~~~~~~~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~~l~ 128 (243)
T TIGR01978 81 LAFQYPEEIPGVSNLEFLRSALNARR-----------SARGE---------------------EPLDLLDFLKLLKAKLA 128 (243)
T ss_pred eeeccccccCCcCHHHHHHHHHHHhh-----------ccccc---------------------ccccHHHHHHHHHHHHH
Confidence 99999988888899999853211000 00000 00011123346678888
Q ss_pred hcCCCcccccccCC-CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHH
Q 006442 245 ELGFTADDGDRLVA-SFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLD 320 (645)
Q Consensus 245 ~lgl~~~~~~~~~~-~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~ 320 (645)
.+|+.....++++. +||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .|.|||++|||++++.
T Consensus 129 ~~~l~~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~ 208 (243)
T TIGR01978 129 LLGMDEEFLNRSVNEGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLN 208 (243)
T ss_pred HcCCchhhcccccccCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHH
Confidence 89996456677776 5999999999999999999999999999999999999999988753 4789999999999999
Q ss_pred hh-cCeEEEEcCceeEEeccChH
Q 006442 321 QL-CTKIVETEMGVSRTYEGNYS 342 (645)
Q Consensus 321 ~~-~d~i~~l~~G~~~~~~g~~~ 342 (645)
.+ ||+++++++|++. +.|+.+
T Consensus 209 ~~~~d~i~~l~~G~i~-~~g~~~ 230 (243)
T TIGR01978 209 YIKPDYVHVLLDGRIV-KSGDVE 230 (243)
T ss_pred hhcCCeEEEEeCCEEE-EecCHH
Confidence 98 8999999999973 556654
No 166
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.8e-41 Score=350.92 Aligned_cols=204 Identities=30% Similarity=0.461 Sum_probs=180.4
Q ss_pred EEEEEeeeeeeC-CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------cchh
Q 006442 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYF 493 (645)
Q Consensus 424 ~i~~~~v~~~y~-~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~ 493 (645)
.++++|+++.|+ ++.+|+||||+|++|+++||+||||||||||+|+|+|+++|++|+|.++|.+.. .+|+
T Consensus 4 ~i~~~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~igy~ 83 (293)
T COG1131 4 VIEVRNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIGYV 83 (293)
T ss_pred eeeecceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheEEE
Confidence 478999999999 699999999999999999999999999999999999999999999999997753 3566
Q ss_pred ccchhhcCCCCCCHHHHHHhhhccc------cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEe
Q 006442 494 EQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 567 (645)
+|.. .+.+.+|+.|++.+....+ ..+.+.++++.+++.. ..++++..||+||||||.||+||+.+|++|||
T Consensus 84 ~~~~--~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~lS~G~kqrl~ia~aL~~~P~lliL 160 (293)
T COG1131 84 PQEP--SLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLED-KANKKVRTLSGGMKQRLSIALALLHDPELLIL 160 (293)
T ss_pred ccCC--CCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCch-hhCcchhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 6653 4778999999998765432 2457889999999964 44888999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---C-ceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 568 DEPTNHLDIPSKEMLEEAISEY---K-GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 568 DEPt~~LD~~s~~~l~~~l~~~---~-~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
||||+|||+.++..+.+.|+++ + .|||++||.++.+..+||||++|++|+++.+ |..+++.+.
T Consensus 161 DEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~-g~~~~l~~~ 227 (293)
T COG1131 161 DEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAE-GTPEELKEK 227 (293)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEe-CCHHHHHHh
Confidence 9999999999999999999865 3 4999999999999999999999999999964 577765544
No 167
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=4.8e-41 Score=346.72 Aligned_cols=208 Identities=25% Similarity=0.466 Sum_probs=171.8
Q ss_pred cEEEEeEEEEeC---------CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------
Q 006442 97 GVKLENISKSYK---------GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~---------~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------- 160 (645)
+|+++|++|+|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 589999999995 3579999999999999999999999999999999999999999999998632
Q ss_pred ------ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCCh
Q 006442 161 ------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (645)
Q Consensus 161 ------~~i~~v~Q~~~--~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (645)
..|+|++|++. +.+..|+.||+...... . ..+..
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~--------------~------------------------~~~~~ 123 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRH--------------L------------------------TSLDE 123 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHH--------------h------------------------cCCCH
Confidence 25999999973 44568999997522100 0 00111
Q ss_pred hcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCe
Q 006442 233 DTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVP 308 (645)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~t 308 (645)
.....++.++++.+|+.....++++.+|||||||||+|||||+.+|++|||||||++||+.++..+.++|++ .|+|
T Consensus 124 ~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~t 203 (265)
T TIGR02769 124 SEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTA 203 (265)
T ss_pred HHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcE
Confidence 122345667788889864567888999999999999999999999999999999999999999988887743 4899
Q ss_pred EEEEecCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 309 MVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 309 vIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
||++|||++++..+||+++++++|++. ..|...+
T Consensus 204 iiivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~ 237 (265)
T TIGR02769 204 YLFITHDLRLVQSFCQRVAVMDKGQIV-EECDVAQ 237 (265)
T ss_pred EEEEeCCHHHHHHHhcEEEEEeCCEEE-EECCHHH
Confidence 999999999999999999999999874 5565443
No 168
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-41 Score=340.87 Aligned_cols=202 Identities=29% Similarity=0.454 Sum_probs=174.3
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhcc
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQ 495 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~q 495 (645)
+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 2 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 81 (239)
T cd03296 2 SIEVRNVSKRFGDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVFQ 81 (239)
T ss_pred EEEEEeEEEEECCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEec
Confidence 489999999999888999999999999999999999999999999999999999999999997652 235555
Q ss_pred chhhcCCCCCCHHHHHHhhhcc--------c--cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeE
Q 006442 496 NQAEALDLDKTVLETVAEAAED--------W--RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~~~--------~--~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 565 (645)
+ ..+.+..|+.+|+...... . ..+.+..+++.+++. +..++++.+|||||||||+|||||+.+|++|
T Consensus 82 ~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~ll 158 (239)
T cd03296 82 H--YALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLD-WLADRYPAQLSGGQRQRVALARALAVEPKVL 158 (239)
T ss_pred C--CcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCCh-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 4 3455678999999764321 1 123467889999994 6678999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 566 lLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|++.. .++.+++.
T Consensus 159 llDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 225 (239)
T cd03296 159 LLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQ-VGTPDEVY 225 (239)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEE-ecCHHHHh
Confidence 999999999999999999999864 4699999999999999999999999999975 46666654
No 169
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-41 Score=321.62 Aligned_cols=206 Identities=27% Similarity=0.410 Sum_probs=177.8
Q ss_pred EEEEEeeeeeeCCee-ceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--cchhccc----
Q 006442 424 VVTIKNLEFGYEDRL-LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--PNYFEQN---- 496 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~-~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--~~~~~q~---- 496 (645)
||++.+++++|++.. ++++|||+++.||++||.|+||+||||+||+|++++.|++|.|+++|.+.. |..+.+.
T Consensus 1 Ml~v~~l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGVl 80 (245)
T COG4555 1 MLEVTDLTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGVL 80 (245)
T ss_pred CeeeeehhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhccee
Confidence 588999999999865 899999999999999999999999999999999999999999999998752 2222111
Q ss_pred -hhhcCCCCCCHHHHHHhhhccc------cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeC
Q 006442 497 -QAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (645)
Q Consensus 497 -~~~~l~~~~tv~e~v~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 569 (645)
....+...+|+.||+.+..... ...++.++.+++++ .+..++++..||-|+||||+|||||+++|+++||||
T Consensus 81 ~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l-~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~vlDE 159 (245)
T COG4555 81 FGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQL-LEYLDRRVGEFSTGMKQKVAIARALVHDPSILVLDE 159 (245)
T ss_pred cCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhCh-HHHHHHHHhhhchhhHHHHHHHHHHhcCCCeEEEcC
Confidence 2345667899999998764321 23457788889999 578999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 570 PTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 570 Pt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
||||||..++..+.+.+.+. +.+||+.||++++++.+||||++|++|+++. .|+.+...+.
T Consensus 160 P~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~-~gs~~~l~~r 223 (245)
T COG4555 160 PTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVL-EGSIEALDAR 223 (245)
T ss_pred CCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEE-cCCHHHHHHH
Confidence 99999999999999999876 4599999999999999999999999999984 6777766543
No 170
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-41 Score=337.36 Aligned_cols=193 Identities=33% Similarity=0.469 Sum_probs=168.6
Q ss_pred EEEEeeeeeeCC----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----cchhcc
Q 006442 425 VTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----PNYFEQ 495 (645)
Q Consensus 425 i~~~~v~~~y~~----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----~~~~~q 495 (645)
|+++|+++.|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 478999999987 78999999999999999999999999999999999999999999999998752 345565
Q ss_pred chhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeC
Q 006442 496 NQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 569 (645)
.. .+....|+.+|+...... ...+.+.++++.+++. +..++++.+||||||||++|||||+.+|++|||||
T Consensus 81 ~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDE 157 (220)
T cd03293 81 QD--ALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLS-GFENAYPHQLSGGMRQRVALARALAVDPDVLLLDE 157 (220)
T ss_pred cc--ccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 43 455668999998764321 1134577899999994 66789999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEe--CCeEEe
Q 006442 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVK--GSNLQD 620 (645)
Q Consensus 570 Pt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~--~g~i~~ 620 (645)
||++||+.++..+.+.|++. +.|||+||||++++..+||++++|+ +|++.+
T Consensus 158 Pt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~ 214 (220)
T cd03293 158 PFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVA 214 (220)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEE
Confidence 99999999999999999754 4699999999999999999999999 799875
No 171
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-41 Score=348.17 Aligned_cols=207 Identities=20% Similarity=0.282 Sum_probs=170.8
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------------ceEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKIA 164 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------~~i~ 164 (645)
+|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..|+
T Consensus 1 ml~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i~ 80 (271)
T PRK13638 1 MLATSDLWFRYQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVA 80 (271)
T ss_pred CeEEEEEEEEcCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhheE
Confidence 4889999999988889999999999999999999999999999999999999999999987743 2499
Q ss_pred EEeccCcc-CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhc
Q 006442 165 FLSQEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (645)
Q Consensus 165 ~v~Q~~~~-~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (645)
|++|++.. .+..|+.+|+...... . ........+++.+++
T Consensus 81 ~v~q~~~~~~~~~~~~~~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l 121 (271)
T PRK13638 81 TVFQDPEQQIFYTDIDSDIAFSLRN---------------L------------------------GVPEAEITRRVDEAL 121 (271)
T ss_pred EEeeChhhccccccHHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHH
Confidence 99999753 3455788887421100 0 001111233456677
Q ss_pred hhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHH
Q 006442 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLD 320 (645)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~ 320 (645)
+.+|+. +..++++.+||||||||++|||||+.+|++|||||||++||+.++.++.++|++ .|.|||++|||++++.
T Consensus 122 ~~~~l~-~~~~~~~~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~ 200 (271)
T PRK13638 122 TLVDAQ-HFRHQPIQCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIY 200 (271)
T ss_pred HHcCCH-hHhcCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 788885 567888999999999999999999999999999999999999999999888753 4889999999999999
Q ss_pred hhcCeEEEEcCceeEEeccChHHH
Q 006442 321 QLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
.+||+++++++|++. ..|...++
T Consensus 201 ~~~d~i~~l~~G~i~-~~g~~~~~ 223 (271)
T PRK13638 201 EISDAVYVLRQGQIL-THGAPGEV 223 (271)
T ss_pred HhCCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999974 45665443
No 172
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=7.1e-41 Score=346.15 Aligned_cols=205 Identities=30% Similarity=0.395 Sum_probs=175.7
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc------------
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------ 489 (645)
..+|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 5 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 5 ANLVDMRGVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred cceEEEeCeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 35799999999999888999999999999999999999999999999999999999999999997652
Q ss_pred -cchhccchhhcCCCCCCHHHHHHhhhcc---cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccC
Q 006442 490 -PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (645)
Q Consensus 490 -~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~ 561 (645)
.+|++|+ ..+.+..|+.+|+...... .. ...+..+|+.+++. +..++++.+|||||||||+|||||+.+
T Consensus 85 ~i~~v~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrv~laral~~~ 161 (269)
T PRK11831 85 RMSMLFQS--GALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLR-GAAKLMPSELSGGMARRAALARAIALE 161 (269)
T ss_pred cEEEEecc--cccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 1244443 3455678999999754211 11 23466789999995 677899999999999999999999999
Q ss_pred CCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 562 STLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 562 p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|++|||||||++||+.+++.+.++|+++ +.|||+||||++++.++||++++|++|++.. .|+.+++.+
T Consensus 162 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~~ 233 (269)
T PRK11831 162 PDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVA-HGSAQALQA 233 (269)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEE-eCCHHHHhc
Confidence 9999999999999999999999999864 4699999999999999999999999999985 466666543
No 173
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-41 Score=348.88 Aligned_cols=209 Identities=23% Similarity=0.383 Sum_probs=174.9
Q ss_pred ccEEEEeEEEEeC-CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------------ce
Q 006442 96 SGVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MK 162 (645)
Q Consensus 96 ~~i~i~nls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------~~ 162 (645)
++|+++|++++|+ +..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ..
T Consensus 4 ~~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 4 YILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred ceEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 3699999999996 5679999999999999999999999999999999999999999999998743 24
Q ss_pred EEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHh
Q 006442 163 IAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (645)
Q Consensus 163 i~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (645)
++|++|++. ..+..|++||+...... ..++......++.+
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~---------------------------------------~~~~~~~~~~~~~~ 124 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVN---------------------------------------LKLPEDEVRKRVDN 124 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHH---------------------------------------cCCCHHHHHHHHHH
Confidence 999999974 23567999998532100 00111122345667
Q ss_pred hchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHH
Q 006442 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRA 317 (645)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~ 317 (645)
+++.+|+. +..++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .|.|||++|||++
T Consensus 125 ~l~~~gL~-~~~~~~~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~ 203 (283)
T PRK13636 125 ALKRTGIE-HLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID 203 (283)
T ss_pred HHHHCCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH
Confidence 78888986 678899999999999999999999999999999999999999999988887742 3899999999999
Q ss_pred HHHhhcCeEEEEcCceeEEeccChHHHH
Q 006442 318 FLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 318 ~l~~~~d~i~~l~~G~~~~~~g~~~~~~ 345 (645)
++..+||+++++++|++ .+.|..++..
T Consensus 204 ~~~~~~dri~~l~~G~i-~~~g~~~~~~ 230 (283)
T PRK13636 204 IVPLYCDNVFVMKEGRV-ILQGNPKEVF 230 (283)
T ss_pred HHHHhCCEEEEEECCEE-EEeCCHHHHh
Confidence 99999999999999998 4667765543
No 174
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-42 Score=333.77 Aligned_cols=209 Identities=28% Similarity=0.406 Sum_probs=183.7
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceeccc---------ch
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP---------NY 492 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~---------~~ 492 (645)
.+++++++++++||+-.+++||||++++||+++|+||||||||||+++|.|+++|++|+|.++|.++.. +.
T Consensus 2 ~~lL~v~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi 81 (250)
T COG0411 2 TPLLEVRGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGI 81 (250)
T ss_pred CceeeeccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccc
Confidence 357899999999999999999999999999999999999999999999999999999999999998732 22
Q ss_pred hccchhhcCCCCCCHHHHHHhhhc------------------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHH
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAE------------------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAF 554 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~------------------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~l 554 (645)
.+-.|...+++++||.||+..+.. ....+++..+|+.+|+ .+..+.+..+||+|||+|+-|
T Consensus 82 ~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL-~~~a~~~A~~LsyG~qR~LEI 160 (250)
T COG0411 82 ARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGL-GELADRPAGNLSYGQQRRLEI 160 (250)
T ss_pred eeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCC-chhhcchhhcCChhHhHHHHH
Confidence 233344578899999999987632 1113468899999999 478899999999999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
||||+.+|++|+||||.+||.+.....+.+.|++. +.||++|-||++.++++||||+||+.|+++. .|++++..+
T Consensus 161 ArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IA-eG~P~eV~~ 239 (250)
T COG0411 161 ARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIA-EGTPEEVRN 239 (250)
T ss_pred HHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcc-cCCHHHHhc
Confidence 99999999999999999999999999999998764 3699999999999999999999999999884 699998765
Q ss_pred HH
Q 006442 631 LW 632 (645)
Q Consensus 631 ~~ 632 (645)
..
T Consensus 240 dp 241 (250)
T COG0411 240 NP 241 (250)
T ss_pred CH
Confidence 43
No 175
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-41 Score=342.38 Aligned_cols=210 Identities=22% Similarity=0.294 Sum_probs=173.3
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC----------c
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----------M 161 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~----------~ 161 (645)
.|+++|++++|++.++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+ .
T Consensus 3 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 82 (250)
T PRK14247 3 KIEIRDLKVSFGQVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRR 82 (250)
T ss_pred eEEEEeeEEEECCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhc
Confidence 58999999999988899999999999999999999999999999999999974 69999988742 2
Q ss_pred eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHh
Q 006442 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (645)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (645)
.|+|++|++.+++..|+.||+...+... . . ........+.+.+
T Consensus 83 ~i~~v~q~~~~~~~~tv~enl~~~~~~~-----------~-~-------------------------~~~~~~~~~~~~~ 125 (250)
T PRK14247 83 RVQMVFQIPNPIPNLSIFENVALGLKLN-----------R-L-------------------------VKSKKELQERVRW 125 (250)
T ss_pred cEEEEeccCccCCCCcHHHHHHHHHHhc-----------c-c-------------------------cCCHHHHHHHHHH
Confidence 5999999988778899999985321100 0 0 0000112344566
Q ss_pred hchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCH
Q 006442 242 LMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDR 316 (645)
Q Consensus 242 ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~ 316 (645)
+++.+|+.. ...++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|++ .+.|||++||++
T Consensus 126 ~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~ 205 (250)
T PRK14247 126 ALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFP 205 (250)
T ss_pred HHHHcCCCcchhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 777777742 346888999999999999999999999999999999999999999999988753 478999999999
Q ss_pred HHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 317 AFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 317 ~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+++..+||+++++++|++ ...|+..++
T Consensus 206 ~~~~~~~d~i~~l~~G~i-~~~g~~~~~ 232 (250)
T PRK14247 206 QQAARISDYVAFLYKGQI-VEWGPTREV 232 (250)
T ss_pred HHHHHhcCEEEEEECCeE-EEECCHHHH
Confidence 999999999999999997 355665443
No 176
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7.2e-41 Score=359.26 Aligned_cols=205 Identities=26% Similarity=0.439 Sum_probs=179.7
Q ss_pred CCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cch
Q 006442 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNY 492 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~ 492 (645)
..++|+++|+++.|+++.+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+|
T Consensus 11 ~~~~L~l~~l~~~~~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 90 (375)
T PRK09452 11 LSPLVELRGISKSFDGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNT 90 (375)
T ss_pred CCceEEEEEEEEEECCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 455799999999999888999999999999999999999999999999999999999999999998762 245
Q ss_pred hccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEE
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 566 (645)
++|+ ..+++.+||.+|+.++... .. ..++.++++.+++. +..++++.+|||||||||+|||||+.+|++||
T Consensus 91 vfQ~--~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~p~~LSgGq~QRVaLARaL~~~P~llL 167 (375)
T PRK09452 91 VFQS--YALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLE-EFAQRKPHQLSGGQQQRVAIARAVVNKPKVLL 167 (375)
T ss_pred EecC--cccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 5554 4678899999999876431 11 23577889999995 77899999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 567 LDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 567 LDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||||++||..++..|.+.|++. +.|+|+||||.+++..+||||++|++|++... |..+++.
T Consensus 168 LDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~-g~~~~i~ 233 (375)
T PRK09452 168 LDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQD-GTPREIY 233 (375)
T ss_pred EeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE-cCHHHHH
Confidence 99999999999999999988753 56999999999999999999999999999864 5655554
No 177
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=5.7e-41 Score=346.44 Aligned_cols=210 Identities=17% Similarity=0.377 Sum_probs=172.4
Q ss_pred ccEEEEeEEEEeCC---------eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------
Q 006442 96 SGVKLENISKSYKG---------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------ 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~---------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------ 160 (645)
++|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|..
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~ 82 (267)
T PRK15112 3 TLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDY 82 (267)
T ss_pred ceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCch
Confidence 46999999999962 469999999999999999999999999999999999999999999997632
Q ss_pred ----ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhc
Q 006442 161 ----MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDT 234 (645)
Q Consensus 161 ----~~i~~v~Q~~~--~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (645)
..++|++|++. +.+..|+.+++....... .......
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--------------------------------------~~~~~~~ 124 (267)
T PRK15112 83 SYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLN--------------------------------------TDLEPEQ 124 (267)
T ss_pred hhHhccEEEEecCchhhcCcchhHHHHHHHHHHhc--------------------------------------cCCCHHH
Confidence 25999999974 345668888874211000 0001112
Q ss_pred HHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEE
Q 006442 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMV 310 (645)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvI 310 (645)
..+.+.++++.+|+.....++.+.+|||||||||+|||||+.+|+||||||||++||+.+++++.++|++ .|.|||
T Consensus 125 ~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvi 204 (267)
T PRK15112 125 REKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYI 204 (267)
T ss_pred HHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEE
Confidence 2345667888889854567788899999999999999999999999999999999999999999888753 488999
Q ss_pred EEecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 311 ivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
++||+++++..+||+++++++|++. ..|...++
T Consensus 205 ivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 237 (267)
T PRK15112 205 YVTQHLGMMKHISDQVLVMHQGEVV-ERGSTADV 237 (267)
T ss_pred EEeCCHHHHHHhcCEEEEEECCEEE-ecCCHHHH
Confidence 9999999999999999999999984 55665544
No 178
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.9e-41 Score=334.22 Aligned_cols=193 Identities=28% Similarity=0.386 Sum_probs=169.8
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhccc
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~q~ 496 (645)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 80 (208)
T cd03268 1 LKTNDLTKTYGKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIEA 80 (208)
T ss_pred CEEEEEEEEECCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecCC
Confidence 47899999998889999999999999999999999999999999999999999999999997652 2344544
Q ss_pred hhhcCCCCCCHHHHHHhhhcc--ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCC
Q 006442 497 QAEALDLDKTVLETVAEAAED--WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHL 574 (645)
Q Consensus 497 ~~~~l~~~~tv~e~v~~~~~~--~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~L 574 (645)
..+.+..|+.+|+...... ....++..+++.+++. +..++++.+|||||||||+||||++.+|++|||||||++|
T Consensus 81 --~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 157 (208)
T cd03268 81 --PGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLK-DSAKKKVKGFSLGMKQRLGIALALLGNPDLLILDEPTNGL 157 (208)
T ss_pred --CccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCH-HHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccC
Confidence 3456678999999765321 2345678889999994 6678999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 575 DIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 575 D~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
|+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|++..
T Consensus 158 D~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~ 206 (208)
T cd03268 158 DPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIE 206 (208)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEe
Confidence 999999999999864 4699999999999999999999999999874
No 179
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.1e-40 Score=342.72 Aligned_cols=209 Identities=25% Similarity=0.391 Sum_probs=172.6
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------------
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------------- 160 (645)
++|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 5 ~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~~ 84 (258)
T PRK11701 5 PLLSVRGLTKLYGPRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAERR 84 (258)
T ss_pred ceEEEeeeEEEcCCceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHHH
Confidence 36999999999988889999999999999999999999999999999999999999999988754
Q ss_pred ----ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhc
Q 006442 161 ----MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDT 234 (645)
Q Consensus 161 ----~~i~~v~Q~~~--~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (645)
..++|++|++. +....|+.+|+...+.. .. ..+...
T Consensus 85 ~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~--------------~~------------------------~~~~~~ 126 (258)
T PRK11701 85 RLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMA--------------VG------------------------ARHYGD 126 (258)
T ss_pred HHhhcceEEEeeCcccccCccccHHHHHHHHHHH--------------hc------------------------cCcHHH
Confidence 14999999974 44567888887421100 00 000011
Q ss_pred HHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEE
Q 006442 235 LDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMV 310 (645)
Q Consensus 235 ~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvI 310 (645)
...++.++++.+|+.....++.+.+||||||||++|||||+.+|+||||||||++||+.+++++.+.|+ +.|.|||
T Consensus 127 ~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii 206 (258)
T PRK11701 127 IRATAGDWLERVEIDAARIDDLPTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVV 206 (258)
T ss_pred HHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEE
Confidence 234456778888886446788899999999999999999999999999999999999999999988764 2489999
Q ss_pred EEecCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 311 ivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
++||+++++..+||+|+++++|++. +.|..++
T Consensus 207 ~isH~~~~~~~~~d~i~~l~~g~i~-~~~~~~~ 238 (258)
T PRK11701 207 IVTHDLAVARLLAHRLLVMKQGRVV-ESGLTDQ 238 (258)
T ss_pred EEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHH
Confidence 9999999999999999999999984 5565444
No 180
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-41 Score=340.79 Aligned_cols=201 Identities=27% Similarity=0.398 Sum_probs=172.6
Q ss_pred EEEEeeeeeeCC-eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-------------c
Q 006442 425 VTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------P 490 (645)
Q Consensus 425 i~~~~v~~~y~~-~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------~ 490 (645)
|+++|++++|++ +.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 80 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQI 80 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhcc
Confidence 478999999987 78999999999999999999999999999999999999999999999997652 1
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhc--------------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHH
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAE--------------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCK 556 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~--------------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAr 556 (645)
+|++|+ ..+++..|+.+|+..... ....+.+.++++.+++. +..++++.+|||||||||+|||
T Consensus 81 ~~~~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~ 157 (241)
T cd03256 81 GMIFQQ--FNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLL-DKAYQRADQLSGGQQQRVAIAR 157 (241)
T ss_pred EEEccc--CcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCCh-hhhCCCcccCCHHHHHHHHHHH
Confidence 234443 345567899999975321 11234567889999994 6678999999999999999999
Q ss_pred HHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||+.+|++|||||||++||+.++..+.+.|++. +.|||+||||++++.++||++++|++|+++. .++.+++.
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~ 233 (241)
T cd03256 158 ALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVF-DGPPAELT 233 (241)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe-ecCHHHhh
Confidence 999999999999999999999999999999764 4699999999999999999999999999985 47777653
No 181
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-41 Score=349.23 Aligned_cols=205 Identities=27% Similarity=0.342 Sum_probs=172.8
Q ss_pred EEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------------ceEE
Q 006442 99 KLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIA 164 (645)
Q Consensus 99 ~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------------~~i~ 164 (645)
.++|+++.|++.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++
T Consensus 26 ~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~ 105 (269)
T cd03294 26 SKEEILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKIS 105 (269)
T ss_pred hhhhhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEE
Confidence 67799999999999999999999999999999999999999999999999999999987632 2599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
|++|++.+++..|+.||+...... . .........++.++++
T Consensus 106 ~v~q~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~ 146 (269)
T cd03294 106 MVFQSFALLPHRTVLENVAFGLEV---------------Q------------------------GVPRAEREERAAEALE 146 (269)
T ss_pred EEecCcccCCCCcHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHH
Confidence 999999887789999998532100 0 0001112345667788
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHH
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLD 320 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~ 320 (645)
.+|+. +..++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|||++||+++++.
T Consensus 147 ~~~l~-~~~~~~~~~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~ 225 (269)
T cd03294 147 LVGLE-GWEHKYPDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEAL 225 (269)
T ss_pred HcCCH-hHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH
Confidence 88986 567889999999999999999999999999999999999999999999987642 4799999999999999
Q ss_pred hhcCeEEEEcCceeEEeccChHHH
Q 006442 321 QLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
.+||+++++++|++. ..|..+++
T Consensus 226 ~~~d~v~~l~~G~i~-~~g~~~~~ 248 (269)
T cd03294 226 RLGDRIAIMKDGRLV-QVGTPEEI 248 (269)
T ss_pred HhcCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999984 44554443
No 182
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=5.6e-41 Score=336.20 Aligned_cols=194 Identities=26% Similarity=0.401 Sum_probs=169.5
Q ss_pred EEEEEeeeeeeCCe----eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------c
Q 006442 424 VVTIKNLEFGYEDR----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------P 490 (645)
Q Consensus 424 ~i~~~~v~~~y~~~----~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~ 490 (645)
+|+++|++++|+++ ++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 1 ~l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i 80 (218)
T cd03266 1 MITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRL 80 (218)
T ss_pred CeEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhE
Confidence 47899999999876 7999999999999999999999999999999999999999999999997753 2
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCe
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 564 (645)
+|++|+ ..+++..|+.+|+...... .....+.++++.+++. +..++++.+||||||||++|||||+.+|++
T Consensus 81 ~~~~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~i 157 (218)
T cd03266 81 GFVSDS--TGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGME-ELLDRRVGGFSTGMRQKVAIARALVHDPPV 157 (218)
T ss_pred EEecCC--cccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHHhhhhhhcCHHHHHHHHHHHHHhcCCCE
Confidence 344444 3455668999998754221 1134577899999994 678999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 565 LlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
|||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|++..
T Consensus 158 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~ 216 (218)
T cd03266 158 LLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVY 216 (218)
T ss_pred EEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEee
Confidence 9999999999999999999999865 4699999999999999999999999999874
No 183
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=6e-41 Score=334.77 Aligned_cols=194 Identities=27% Similarity=0.469 Sum_probs=169.2
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhccc
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~q~ 496 (645)
|+++|++++|+++++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q~ 80 (213)
T cd03301 1 VELENVTKRFGNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQN 80 (213)
T ss_pred CEEEeeEEEECCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEecC
Confidence 47899999998888999999999999999999999999999999999999999999999998752 2355554
Q ss_pred hhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCC
Q 006442 497 QAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (645)
Q Consensus 497 ~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 570 (645)
..+.+..|+.+|+...... . ..+++..+++.+++. +..++++.+||||||||++|||||+.+|++||||||
T Consensus 81 --~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qr~~laral~~~p~llllDEP 157 (213)
T cd03301 81 --YALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIE-HLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMDEP 157 (213)
T ss_pred --hhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-HHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3455678999999764211 1 123567889999994 677999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEee
Q 006442 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDY 621 (645)
Q Consensus 571 t~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~ 621 (645)
|++||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|+++.+
T Consensus 158 t~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~ 212 (213)
T cd03301 158 LSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQI 212 (213)
T ss_pred cccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEec
Confidence 9999999999999999764 56999999999999999999999999999753
No 184
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=341.90 Aligned_cols=209 Identities=19% Similarity=0.298 Sum_probs=169.4
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC---------
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~--------- 160 (645)
.+.|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 4 ~~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 4 PPKMEARGLSFFYGDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred CcEEEEeeeEEEECCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 346999999999988889999999999999999999999999999999999864 589999987632
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..++|++|++.+++ .|+.||+...+... .. .......+
T Consensus 84 ~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---------------~~-----------------------~~~~~~~~ 124 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFP-KSIFENVAYGLRVN---------------GV-----------------------KDKAYLAE 124 (253)
T ss_pred HHhhcEEEEecCCCCCc-CcHHHHHHHHHHHc---------------CC-----------------------CCHHHHHH
Confidence 25999999987765 69999985321100 00 00001123
Q ss_pred HHHhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006442 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (645)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (645)
++.++++.+|+.. ...++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|++ .++|||++
T Consensus 125 ~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~ 204 (253)
T PRK14242 125 RVERSLRHAALWDEVKDRLHESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIV 204 (253)
T ss_pred HHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEE
Confidence 4455666666632 245778899999999999999999999999999999999999999999988753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
|||++++..+||+++++++|++. ..|..++
T Consensus 205 tH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~ 234 (253)
T PRK14242 205 THNMQQAARVSDVTAFFYMGKLI-EVGPTEQ 234 (253)
T ss_pred EecHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 99999999999999999999984 4455443
No 185
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-41 Score=347.54 Aligned_cols=206 Identities=24% Similarity=0.387 Sum_probs=172.3
Q ss_pred cEEEEeEEEEeCC---eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceE
Q 006442 97 GVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (645)
Q Consensus 97 ~i~i~nls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i 163 (645)
+|+++|++++|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 5999999999964 359999999999999999999999999999999999999999999998743 258
Q ss_pred EEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
+|++|++. .++..||.||+...... ...+.....+++.++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~---------------------------------------~~~~~~~~~~~~~~~ 124 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLEN---------------------------------------KGIPHEEMKERVNEA 124 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHh---------------------------------------CCCCHHHHHHHHHHH
Confidence 99999984 55678999998522100 001122234456778
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---c-CCCeEEEEecCHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---K-QDVPMVIISHDRAF 318 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~-~g~tvIivsHd~~~ 318 (645)
++.+|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|+ + .|+|||++|||+++
T Consensus 125 l~~~gL~-~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~ 203 (279)
T PRK13650 125 LELVGMQ-DFKEREPARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDE 203 (279)
T ss_pred HHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH
Confidence 8888986 57789999999999999999999999999999999999999999999988764 2 48999999999999
Q ss_pred HHhhcCeEEEEcCceeEEeccChHHH
Q 006442 319 LDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+. .||+|+++++|++. ..|+..++
T Consensus 204 ~~-~~dri~~l~~G~i~-~~g~~~~~ 227 (279)
T PRK13650 204 VA-LSDRVLVMKNGQVE-STSTPREL 227 (279)
T ss_pred HH-hCCEEEEEECCEEE-EECCHHHH
Confidence 94 79999999999974 45665543
No 186
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=353.09 Aligned_cols=209 Identities=22% Similarity=0.392 Sum_probs=174.9
Q ss_pred ccEEEEeEEEEeCC----------eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----
Q 006442 96 SGVKLENISKSYKG----------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~----------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----- 160 (645)
+.|+++|+++.|+. ..+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~ 83 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKAD 83 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCC
Confidence 46999999999962 469999999999999999999999999999999999999999999998742
Q ss_pred --------ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhC
Q 006442 161 --------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAV 230 (645)
Q Consensus 161 --------~~i~~v~Q~~--~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (645)
.+|+|++|++ .+.+..||.+++...+.. . ...
T Consensus 84 ~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~---------------~-----------------------~~~ 125 (327)
T PRK11308 84 PEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLI---------------N-----------------------TSL 125 (327)
T ss_pred HHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHH---------------c-----------------------cCC
Confidence 2599999998 466678998887422100 0 001
Q ss_pred ChhcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCC
Q 006442 231 NLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQD 306 (645)
Q Consensus 231 ~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g 306 (645)
...+..+++.++++.+|+.....++++.+|||||||||+|||||+.+|++||+||||++||+.++.++.++|+ +.|
T Consensus 126 ~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g 205 (327)
T PRK11308 126 SAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELG 205 (327)
T ss_pred CHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcC
Confidence 1122345677889999996557799999999999999999999999999999999999999999999988774 358
Q ss_pred CeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 307 VPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 307 ~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
.|||+||||+..+.++||+|++|.+|++. ..|...+
T Consensus 206 ~til~iTHdl~~~~~~adrv~vm~~G~iv-e~g~~~~ 241 (327)
T PRK11308 206 LSYVFISHDLSVVEHIADEVMVMYLGRCV-EKGTKEQ 241 (327)
T ss_pred CEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHH
Confidence 99999999999999999999999999984 4455433
No 187
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=5.1e-41 Score=342.09 Aligned_cols=201 Identities=28% Similarity=0.397 Sum_probs=172.8
Q ss_pred EEEEEeeeeeeC-CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-------------
Q 006442 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~-~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------- 489 (645)
+|+++|+++.|+ ++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 1 MLEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred CeEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 478999999998 778999999999999999999999999999999999999999999999997652
Q ss_pred cchhccchhhcCCCCCCHHHHHHhhhc--------------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHH
Q 006442 490 PNYFEQNQAEALDLDKTVLETVAEAAE--------------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFC 555 (645)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~v~~~~~--------------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lA 555 (645)
.+|++|+ ..+.+..|+.+|+..... ....+++.++++.+++. ...++++.+|||||||||+||
T Consensus 81 i~~v~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la 157 (243)
T TIGR02315 81 IGMIFQH--YNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLA-DKAYQRADQLSGGQQQRVAIA 157 (243)
T ss_pred eEEEcCC--CcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHH
Confidence 1244443 345567899999975321 11124577889999994 667899999999999999999
Q ss_pred HHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHH
Q 006442 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQV 628 (645)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~ 628 (645)
|||+.+|++|||||||++||+.++..+.+.|++. +.|||+||||++++.++||++++|++|+++. .++.+++
T Consensus 158 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~ 233 (243)
T TIGR02315 158 RALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVF-DGAPSEL 233 (243)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEe-cCCHHHh
Confidence 9999999999999999999999999999999764 4699999999999999999999999999984 5676654
No 188
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=5.8e-41 Score=340.20 Aligned_cols=201 Identities=30% Similarity=0.445 Sum_probs=172.9
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------cchh
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNYF 493 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~~~ 493 (645)
|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v 80 (236)
T cd03219 1 LEVRGLTKRFGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGRT 80 (236)
T ss_pred CeeeeeEEEECCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEEE
Confidence 46899999998888999999999999999999999999999999999999999999999997652 1244
Q ss_pred ccchhhcCCCCCCHHHHHHhhhccc----------------cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHH
Q 006442 494 EQNQAEALDLDKTVLETVAEAAEDW----------------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKF 557 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~~~----------------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAra 557 (645)
+|+ ..+.+..|+.+|+....... ....+.++++.+++. +..++++.+|||||||||+||||
T Consensus 81 ~q~--~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~a 157 (236)
T cd03219 81 FQI--PRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLA-DLADRPAGELSYGQQRRLEIARA 157 (236)
T ss_pred ecc--cccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCcc-chhhCChhhCCHHHHHHHHHHHH
Confidence 443 34666789999987643211 123467889999995 66789999999999999999999
Q ss_pred HccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 558 l~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++.. .++.+++.
T Consensus 158 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 231 (236)
T cd03219 158 LATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIA-EGTPDEVR 231 (236)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEe-ecCHHHhc
Confidence 99999999999999999999999999999864 4699999999999999999999999999975 46766653
No 189
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-41 Score=335.73 Aligned_cols=196 Identities=24% Similarity=0.366 Sum_probs=165.9
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEecc
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (645)
|+++|++++|+++. .|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 i~~~~l~~~~~~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 78 (211)
T cd03298 1 VRLDKIRFSYGEQP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQE 78 (211)
T ss_pred CEEEeEEEEeCCEe--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEecc
Confidence 47899999998754 39999999999999999999999999999999999999999998742 259999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCC
Q 006442 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (645)
Q Consensus 170 ~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (645)
+.+++..|++||+...+..... . ....+.++.++++.+|+.
T Consensus 79 ~~~~~~~tv~enl~~~~~~~~~--------------------------------------~-~~~~~~~~~~~l~~~~l~ 119 (211)
T cd03298 79 NNLFAHLTVEQNVGLGLSPGLK--------------------------------------L-TAEDRQAIEVALARVGLA 119 (211)
T ss_pred cccCCCCcHHHHHhcccccccC--------------------------------------c-cHHHHHHHHHHHHHcCCH
Confidence 9887788999998532110000 0 001133456778888886
Q ss_pred cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 006442 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (645)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ 325 (645)
+..++++.+||||||||++|||||+.+|++|||||||++||+.+++.+.++|++ .++|||++||+++++..+||+
T Consensus 120 -~~~~~~~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~ 198 (211)
T cd03298 120 -GLEKRLPGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQR 198 (211)
T ss_pred -HHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCE
Confidence 567888999999999999999999999999999999999999999999988752 489999999999999999999
Q ss_pred EEEEcCceeE
Q 006442 326 IVETEMGVSR 335 (645)
Q Consensus 326 i~~l~~G~~~ 335 (645)
++++++|++.
T Consensus 199 i~~l~~G~i~ 208 (211)
T cd03298 199 VVFLDNGRIA 208 (211)
T ss_pred EEEEECCEEe
Confidence 9999999863
No 190
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-41 Score=348.05 Aligned_cols=207 Identities=23% Similarity=0.324 Sum_probs=170.2
Q ss_pred cEEEEeEEEEeCC-----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------- 160 (645)
.|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 3899999999974 369999999999999999999999999999999999999999999997642
Q ss_pred ---ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHH
Q 006442 161 ---MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (645)
Q Consensus 161 ---~~i~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (645)
..|+|++|++. ..+..|+++|+...... . ........
T Consensus 82 ~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~~~~~~ 122 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFEETVLKDVAFGPQN---------------F------------------------GVSQEEAE 122 (280)
T ss_pred HHHhheEEEeeChhhhhccccHHHHHHHHHHH---------------c------------------------CCCHHHHH
Confidence 24899999973 23456999998521100 0 00111223
Q ss_pred HHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEe
Q 006442 237 AKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIIS 313 (645)
Q Consensus 237 ~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivs 313 (645)
+++.++++.+|+.....++++.+||||||||++|||||+.+|++|||||||++||+.+++.+.++|++ .++|||++|
T Consensus 123 ~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivs 202 (280)
T PRK13649 123 ALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVT 202 (280)
T ss_pred HHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 44567778888864467888999999999999999999999999999999999999999999988753 489999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
|+++++..+||+++++++|++. ..|...+
T Consensus 203 H~~~~~~~~~d~i~~l~~G~i~-~~g~~~~ 231 (280)
T PRK13649 203 HLMDDVANYADFVYVLEKGKLV-LSGKPKD 231 (280)
T ss_pred ccHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 9999999999999999999974 4465443
No 191
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=342.51 Aligned_cols=207 Identities=22% Similarity=0.293 Sum_probs=169.7
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC----------
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~---------- 160 (645)
++|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|..
T Consensus 11 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 90 (258)
T PRK14268 11 PQIKVENLNLWYGEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVE 90 (258)
T ss_pred eeEEEeeeEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHH
Confidence 469999999999888899999999999999999999999999999999999975 79999987632
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
..++|++|++.++. .|+.||+...... . .......+++
T Consensus 91 ~~~~i~~v~q~~~~~~-~tv~enl~~~~~~---------------~------------------------~~~~~~~~~~ 130 (258)
T PRK14268 91 LRKNVGMVFQKPNPFP-MSIYDNVAYGPRI---------------H------------------------GANKKDLDGV 130 (258)
T ss_pred HhhhEEEEecCCccCc-ccHHHHHHHHHHH---------------c------------------------CCCHHHHHHH
Confidence 24999999988766 8999998532100 0 0000112234
Q ss_pred HHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006442 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (645)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (645)
+.++++.+|+. ....++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .++|||++|
T Consensus 131 ~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivs 210 (258)
T PRK14268 131 VENALRSAALWDETSDRLKSPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVT 210 (258)
T ss_pred HHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEE
Confidence 55566666663 2346788999999999999999999999999999999999999999999988753 378999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
||++++.++||+|+++++|++. +.|...+
T Consensus 211 H~~~~~~~~~d~i~~l~~G~i~-~~~~~~~ 239 (258)
T PRK14268 211 HNMQQAARISDYTGFFLMGELI-EFGQTRQ 239 (258)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 9999999999999999999974 4455443
No 192
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-41 Score=343.26 Aligned_cols=221 Identities=20% Similarity=0.372 Sum_probs=175.4
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~~ 165 (645)
+|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 5 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 84 (255)
T PRK11300 5 LLSVSGLMMRFGGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGVVR 84 (255)
T ss_pred eEEEeeEEEEECCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCeEE
Confidence 5999999999998889999999999999999999999999999999999999999999998742 24899
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.+++..|+.||+......... ......+... ... .-........+.++++.
T Consensus 85 ~~q~~~~~~~~tv~enl~~~~~~~~~-----~~~~~~~~~~----~~~---------------~~~~~~~~~~~~~~l~~ 140 (255)
T PRK11300 85 TFQHVRLFREMTVIENLLVAQHQQLK-----TGLFSGLLKT----PAF---------------RRAESEALDRAATWLER 140 (255)
T ss_pred eccCcccCCCCcHHHHHHHhhhcccc-----chhhhhhccc----ccc---------------ccchhHHHHHHHHHHHh
Confidence 99999888889999998632110000 0000000000 000 00000122346677888
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---c-CCCeEEEEecCHHHHHh
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---K-QDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~-~g~tvIivsHd~~~l~~ 321 (645)
+|+. +..++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|. + .|+|||++||+++++..
T Consensus 141 ~gl~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~ 219 (255)
T PRK11300 141 VGLL-EHANRQAGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMG 219 (255)
T ss_pred CChh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHH
Confidence 8885 56789999999999999999999999999999999999999999999988874 2 38999999999999999
Q ss_pred hcCeEEEEcCceeEEeccChHH
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+||+++++++|++. +.|..++
T Consensus 220 ~~d~i~~l~~g~i~-~~~~~~~ 240 (255)
T PRK11300 220 ISDRIYVVNQGTPL-ANGTPEE 240 (255)
T ss_pred hCCEEEEEECCeEE-ecCCHHH
Confidence 99999999999984 5565443
No 193
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-41 Score=342.81 Aligned_cols=210 Identities=26% Similarity=0.345 Sum_probs=173.8
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~v 166 (645)
+|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (255)
T PRK11231 2 TLRTENLTVGYGTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLALL 81 (255)
T ss_pred EEEEEeEEEEECCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEEe
Confidence 4899999999998889999999999999999999999999999999999999999999998742 249999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.+++..|+.||+......... .+. ........++.++++.+
T Consensus 82 ~q~~~~~~~~tv~~~i~~~~~~~~~----------~~~-------------------------~~~~~~~~~~~~~l~~~ 126 (255)
T PRK11231 82 PQHHLTPEGITVRELVAYGRSPWLS----------LWG-------------------------RLSAEDNARVNQAMEQT 126 (255)
T ss_pred cccCCCCCCccHHHHHHhccchhhh----------hcc-------------------------CCCHHHHHHHHHHHHHc
Confidence 9998877778999998532110000 000 00011233456677888
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhc
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~ 323 (645)
|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|+ +.++|||++||+++++.++|
T Consensus 127 ~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~ 205 (255)
T PRK11231 127 RIN-HLADRRLTDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYC 205 (255)
T ss_pred CCH-HHHcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhc
Confidence 885 56788899999999999999999999999999999999999999999988874 35899999999999999999
Q ss_pred CeEEEEcCceeEEeccChHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~ 343 (645)
|+++++++|++. ..|..++
T Consensus 206 d~i~~l~~G~i~-~~~~~~~ 224 (255)
T PRK11231 206 DHLVVLANGHVM-AQGTPEE 224 (255)
T ss_pred CEEEEEECCeEE-EEcCHHH
Confidence 999999999874 4555444
No 194
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=341.37 Aligned_cols=210 Identities=21% Similarity=0.256 Sum_probs=170.9
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC----------
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~---------- 160 (645)
.+|+++|++++|+++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.+
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (253)
T PRK14267 3 FAIETVNLRVYYGSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIE 82 (253)
T ss_pred ceEEEEeEEEEeCCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHH
Confidence 369999999999888899999999999999999999999999999999999987 49999987642
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
..++|++|++.+++..|+.||+...... .... ........+
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~---------------~~~~----------------------~~~~~~~~~ 125 (253)
T PRK14267 83 VRREVGMVFQYPNPFPHLTIYDNVAIGVKL---------------NGLV----------------------KSKKELDER 125 (253)
T ss_pred HhhceeEEecCCccCCCCcHHHHHHHHHHh---------------cCcc----------------------CCHHHHHHH
Confidence 2599999999887788999998532110 0000 000112233
Q ss_pred HHhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006442 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (645)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (645)
+.++++.+|+.. ...++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .++|||++|
T Consensus 126 ~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~s 205 (253)
T PRK14267 126 VEWALKKAALWDEVKDRLNDYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVT 205 (253)
T ss_pred HHHHHHHcCCccchhhhhccChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEE
Confidence 455666666632 346778899999999999999999999999999999999999999999988753 368999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
|+++++..+||+|+++++|++. ..|...+
T Consensus 206 H~~~~~~~~~d~i~~l~~G~i~-~~~~~~~ 234 (253)
T PRK14267 206 HSPAQAARVSDYVAFLYLGKLI-EVGPTRK 234 (253)
T ss_pred CCHHHHHhhCCEEEEEECCEEE-EeCCHHH
Confidence 9999999999999999999984 4565444
No 195
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=7.5e-41 Score=361.16 Aligned_cols=203 Identities=25% Similarity=0.438 Sum_probs=177.9
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cch
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (645)
++|+++|++++|+++.+|+++||+|++||+++|+||||||||||||+|+|+++|++|+|.++|.++. .+|
T Consensus 2 ~~L~~~nls~~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~ 81 (402)
T PRK09536 2 PMIDVSDLSVEFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVAS 81 (402)
T ss_pred ceEEEeeEEEEECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEE
Confidence 3699999999999999999999999999999999999999999999999999999999999998753 234
Q ss_pred hccchhhcCCCCCCHHHHHHhhhc----------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCC
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAE----------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPS 562 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~----------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p 562 (645)
+.|+ ..+.+.+|+.+|+..... ....+.+.++++.+++. +..++++.+|||||||||+|||||+++|
T Consensus 82 v~q~--~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~-~~~~~~~~~LSgGerQRv~IArAL~~~P 158 (402)
T PRK09536 82 VPQD--TSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVA-QFADRPVTSLSGGERQRVLLARALAQAT 158 (402)
T ss_pred EccC--CCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 5443 456678999999976431 11234578899999994 7789999999999999999999999999
Q ss_pred CeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 563 TLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 563 ~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
++|||||||+|||+.++..+.++|+++ +.|||++|||++++.++|||+++|++|+++. .|+.++++
T Consensus 159 ~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~-~G~~~ev~ 227 (402)
T PRK09536 159 PVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRA-AGPPADVL 227 (402)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-ecCHHHHh
Confidence 999999999999999999999998865 4599999999999999999999999999985 57777653
No 196
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.9e-41 Score=339.40 Aligned_cols=203 Identities=25% Similarity=0.384 Sum_probs=175.3
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceeccc------------c
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP------------N 491 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~------------~ 491 (645)
+|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +
T Consensus 1 ~l~~~~l~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 80 (240)
T PRK09493 1 MIEFKNVSKHFGPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAG 80 (240)
T ss_pred CEEEEeEEEEECCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceE
Confidence 4789999999988889999999999999999999999999999999999999999999999987531 2
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhc---c----ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCe
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAE---D----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~---~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 564 (645)
|++|+ ..+.+..|+.+|+..... . .....+.++++.+|+. +..++++..||||||||++|||||+.+|++
T Consensus 81 ~~~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~la~al~~~p~l 157 (240)
T PRK09493 81 MVFQQ--FYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLA-ERAHHYPSELSGGQQQRVAIARALAVKPKL 157 (240)
T ss_pred EEecc--cccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCh-HHHhcChhhcCHHHHHHHHHHHHHhcCCCE
Confidence 44443 345567899999976421 1 1123567899999994 667899999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 565 LlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++.+
T Consensus 158 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 225 (240)
T PRK09493 158 MLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAE-DGDPQVLIK 225 (240)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe-eCCHHHHhc
Confidence 9999999999999999999999765 4699999999999999999999999999985 577777654
No 197
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=9.1e-41 Score=356.58 Aligned_cols=202 Identities=29% Similarity=0.433 Sum_probs=177.4
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhcc
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQ 495 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~q 495 (645)
+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 2 ~L~i~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~Q 81 (353)
T PRK10851 2 SIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQ 81 (353)
T ss_pred EEEEEEEEEEeCCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEec
Confidence 489999999999888999999999999999999999999999999999999999999999998762 245555
Q ss_pred chhhcCCCCCCHHHHHHhhhcc------c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeE
Q 006442 496 NQAEALDLDKTVLETVAEAAED------W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~~~------~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 565 (645)
+ ..+++.+|+.+|+.+.... . ...++.++|+.+++. +..++++.+|||||||||+|||||+.+|++|
T Consensus 82 ~--~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgGq~QRvalArAL~~~P~ll 158 (353)
T PRK10851 82 H--YALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLA-HLADRYPAQLSGGQKQRVALARALAVEPQIL 158 (353)
T ss_pred C--cccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 4 4677889999999875321 1 124577899999994 6789999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 566 lLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||||++||+.++..+.+.|++. +.|+|+||||++++..+||||++|++|++.. .|+.+++.
T Consensus 159 LLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~-~g~~~~i~ 225 (353)
T PRK10851 159 LLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQ-AGTPDQVW 225 (353)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHH
Confidence 999999999999999999988754 5699999999999999999999999999985 46666554
No 198
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=5e-41 Score=336.55 Aligned_cols=190 Identities=32% Similarity=0.497 Sum_probs=164.0
Q ss_pred EEEEeeeeeeCC----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------
Q 006442 425 VTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------- 489 (645)
Q Consensus 425 i~~~~v~~~y~~----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------- 489 (645)
|+++|+++.|++ +.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 478999999986 78999999999999999999999999999999999999999999999997652
Q ss_pred ---cchhccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHcc
Q 006442 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (645)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~ 560 (645)
.+|++|+ ..+++..|+.+|+...... . ..+.+.++++.+|+. +..++++.+|||||||||+|||||+.
T Consensus 81 ~~~i~~~~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~ 157 (218)
T cd03255 81 RRHIGFVFQS--FNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLG-DRLNHYPSELSGGQQQRVAIARALAN 157 (218)
T ss_pred hhcEEEEeec--cccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCc-hhhhcChhhcCHHHHHHHHHHHHHcc
Confidence 1233333 3455678999998764321 1 124577899999995 56789999999999999999999999
Q ss_pred CCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeE
Q 006442 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (645)
Q Consensus 561 ~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i 618 (645)
+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++. +||++++|++|++
T Consensus 158 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 158 DPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 99999999999999999999999999864 459999999999997 8999999999874
No 199
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=358.79 Aligned_cols=202 Identities=29% Similarity=0.450 Sum_probs=176.5
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhcc
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQ 495 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~q 495 (645)
.|+++|++++|+++.+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+|++|
T Consensus 3 ~l~i~~l~~~~~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~Q 82 (369)
T PRK11000 3 SVTLRNVTKAYGDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVFQ 82 (369)
T ss_pred EEEEEEEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEeC
Confidence 489999999999888999999999999999999999999999999999999999999999998752 245555
Q ss_pred chhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeC
Q 006442 496 NQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 569 (645)
+ ..+++.+|+.+|+.+.... . ...++.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||
T Consensus 83 ~--~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLLDE 159 (369)
T PRK11000 83 S--YALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLA-HLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDE 159 (369)
T ss_pred C--cccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCCh-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 4 3567789999999875321 1 124578899999994 67899999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 570 Pt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||++||+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|++... |+.+++.
T Consensus 160 Pts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~-g~~~~i~ 222 (369)
T PRK11000 160 PLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQV-GKPLELY 222 (369)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE-cCHHHHH
Confidence 99999999999999888754 56999999999999999999999999999854 6655543
No 200
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-41 Score=348.25 Aligned_cols=205 Identities=25% Similarity=0.360 Sum_probs=174.9
Q ss_pred EEEEEeeeeeeCC-----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------
Q 006442 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~-----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (645)
+|+++|+++.|+. +.+|+++||+|.+||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 4899999999973 25999999999999999999999999999999999999999999999998752
Q ss_pred -----cchhccchhhcCCCCCCHHHHHHhhhccc------cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHH
Q 006442 490 -----PNYFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (645)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~v~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral 558 (645)
.+|+.|+....+ +..|+.+|+.+..... ...++.++++.+++..+..++++..||||||||++|||||
T Consensus 81 ~~~~~ig~v~q~~~~~l-~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL 159 (288)
T PRK13643 81 PVRKKVGVVFQFPESQL-FEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGIL 159 (288)
T ss_pred HHHhhEEEEecCcchhc-ccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHH
Confidence 245566543233 3469999998754321 1234678899999954567899999999999999999999
Q ss_pred ccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||||++|++|+++. .|+.++++.
T Consensus 160 ~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~-~g~~~~~~~ 233 (288)
T PRK13643 160 AMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIIS-CGTPSDVFQ 233 (288)
T ss_pred HhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-ECCHHHHHc
Confidence 9999999999999999999999999998764 4699999999999999999999999999985 577777653
No 201
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=341.81 Aligned_cols=195 Identities=27% Similarity=0.397 Sum_probs=170.3
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----cchhccchh
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----PNYFEQNQA 498 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----~~~~~q~~~ 498 (645)
+|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|.
T Consensus 1 ml~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~-- 78 (255)
T PRK11248 1 MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQN-- 78 (255)
T ss_pred CEEEEEEEEEeCCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCC--
Confidence 478999999998888999999999999999999999999999999999999999999999998753 3455554
Q ss_pred hcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCC
Q 006442 499 EALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTN 572 (645)
Q Consensus 499 ~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~ 572 (645)
..+.+..|+.+|+...... . ...++.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||+
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~ 157 (255)
T PRK11248 79 EGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLE-GAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFG 157 (255)
T ss_pred CccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCh-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 3455678999999764211 1 124578899999995 66789999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEe--CCeEEee
Q 006442 573 HLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVK--GSNLQDY 621 (645)
Q Consensus 573 ~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~--~g~i~~~ 621 (645)
+||+.++..+.+.|+++ +.|||+||||++++..+||++++|+ +|+++..
T Consensus 158 ~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~ 212 (255)
T PRK11248 158 ALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVER 212 (255)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEE
Confidence 99999999999999864 4699999999999999999999998 5998753
No 202
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-41 Score=338.85 Aligned_cols=205 Identities=23% Similarity=0.329 Sum_probs=167.1
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEE
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~ 164 (645)
++|+++|++++|+++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.. ..++
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (237)
T PRK11614 4 VMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVA 83 (237)
T ss_pred cEEEEEeEEEeeCCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEE
Confidence 36999999999988889999999999999999999999999999999999999999999988742 2499
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
|++|++.+++..||.+|+....... .. ......+.++++
T Consensus 84 ~~~q~~~~~~~~tv~~~l~~~~~~~-~~----------------------------------------~~~~~~~~~~l~ 122 (237)
T PRK11614 84 IVPEGRRVFSRMTVEENLAMGGFFA-ER----------------------------------------DQFQERIKWVYE 122 (237)
T ss_pred EeccCcccCCCCcHHHHHHHhhhcc-Ch----------------------------------------hHHHHHHHHHHH
Confidence 9999998877789999985321000 00 000111222233
Q ss_pred hc-CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHH
Q 006442 245 EL-GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLD 320 (645)
Q Consensus 245 ~l-gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~ 320 (645)
.+ ++. +..++++.+||||||||++|||||+.+|+||||||||++||+.+++.+.++|+ +.|.|||++|||++++.
T Consensus 123 ~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~ 201 (237)
T PRK11614 123 LFPRLH-ERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQAL 201 (237)
T ss_pred HHHHHH-HHHhCchhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHH
Confidence 33 222 34466789999999999999999999999999999999999999999988764 35899999999999999
Q ss_pred hhcCeEEEEcCceeEEeccChHH
Q 006442 321 QLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
++||+++++++|++ .+.|+.++
T Consensus 202 ~~~d~i~~l~~G~i-~~~~~~~~ 223 (237)
T PRK11614 202 KLADRGYVLENGHV-VLEDTGDA 223 (237)
T ss_pred hhCCEEEEEeCCEE-EeeCCHHH
Confidence 99999999999997 45566544
No 203
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.6e-41 Score=336.42 Aligned_cols=192 Identities=29% Similarity=0.457 Sum_probs=164.8
Q ss_pred EEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceec-----ccchhccchhhc
Q 006442 426 TIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV-----LPNYFEQNQAEA 500 (645)
Q Consensus 426 ~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~-----~~~~~~q~~~~~ 500 (645)
+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++ ..+|++|+....
T Consensus 1 ~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~~~ 80 (213)
T cd03235 1 EVEDLTVSYGGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRSID 80 (213)
T ss_pred CcccceeEECCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccccc
Confidence 368999999888899999999999999999999999999999999999999999999999764 235666653221
Q ss_pred CCCCCCHHHHHHhhhcc----------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCC
Q 006442 501 LDLDKTVLETVAEAAED----------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (645)
Q Consensus 501 l~~~~tv~e~v~~~~~~----------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 570 (645)
..+..|+.+|+...... ...+.+..+++.+++. +..++++.+|||||||||+|||||+.+|++||||||
T Consensus 81 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEP 159 (213)
T cd03235 81 RDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLS-ELADRQIGELSGGQQQRVLLARALVQDPDLLLLDEP 159 (213)
T ss_pred cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCH-HHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 12457999999764321 1124577899999994 677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeE
Q 006442 571 TNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (645)
Q Consensus 571 t~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i 618 (645)
|++||+.++..+.+.|.++ +.|||+||||++++.++||++++|++|.+
T Consensus 160 t~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~~~ 210 (213)
T cd03235 160 FAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRTVV 210 (213)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCcEe
Confidence 9999999999999999865 36999999999999999999999988644
No 204
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.1e-40 Score=342.49 Aligned_cols=209 Identities=28% Similarity=0.390 Sum_probs=174.1
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEEEe
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFLS 167 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~v~ 167 (645)
|+++|++++|++..+|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|++
T Consensus 2 l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~ 81 (256)
T TIGR03873 2 LRLSRVSWSAGGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALVE 81 (256)
T ss_pred ceEEeEEEEECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEec
Confidence 789999999998899999999999999999999999999999999999999999999998742 2499999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcC
Q 006442 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (645)
Q Consensus 168 Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (645)
|++.+++..||.||+......... .. ........+++.++++.+|
T Consensus 82 q~~~~~~~~tv~e~l~~~~~~~~~----------~~-------------------------~~~~~~~~~~~~~~l~~~~ 126 (256)
T TIGR03873 82 QDSDTAVPLTVRDVVALGRIPHRS----------LW-------------------------AGDSPHDAAVVDRALARTE 126 (256)
T ss_pred ccCccCCCCCHHHHHHhcchhhhh----------hc-------------------------cCCCHHHHHHHHHHHHHcC
Confidence 998777788999998532110000 00 0001112235667788888
Q ss_pred CCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcC
Q 006442 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d 324 (645)
+. +..++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .+.|||++||+++++..+||
T Consensus 127 l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d 205 (256)
T TIGR03873 127 LS-HLADRDMSTLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCD 205 (256)
T ss_pred cH-hhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCC
Confidence 85 677889999999999999999999999999999999999999999999887753 48899999999999999999
Q ss_pred eEEEEcCceeEEeccChHH
Q 006442 325 KIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 325 ~i~~l~~G~~~~~~g~~~~ 343 (645)
+|+++++|++. ..|..++
T Consensus 206 ~i~~l~~G~i~-~~g~~~~ 223 (256)
T TIGR03873 206 HVVVLDGGRVV-AAGPPRE 223 (256)
T ss_pred EEEEEeCCCEE-EecCHHH
Confidence 99999999874 5565544
No 205
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-41 Score=345.26 Aligned_cols=210 Identities=26% Similarity=0.365 Sum_probs=173.4
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEE
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~ 165 (645)
.+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 10 ~~l~i~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 89 (265)
T PRK10575 10 TTFALRNVSFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAY 89 (265)
T ss_pred ceEEEeeEEEEECCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheEE
Confidence 46999999999988889999999999999999999999999999999999999999999998743 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.+++..|+.+|+........ .... ......+.++.++++.
T Consensus 90 v~q~~~~~~~~tv~e~l~~~~~~~~----------~~~~-------------------------~~~~~~~~~~~~~l~~ 134 (265)
T PRK10575 90 LPQQLPAAEGMTVRELVAIGRYPWH----------GALG-------------------------RFGAADREKVEEAISL 134 (265)
T ss_pred eccCCCCCCCccHHHHHHhCccccc----------cccc-------------------------CCCHHHHHHHHHHHHH
Confidence 9999877778899999853210000 0000 0001123445677888
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHh
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~ 321 (645)
+|+. +..++++.+|||||||||+|||||+.+|+||||||||++||+.+++.+.++|++ .|.|||++||+++++.+
T Consensus 135 ~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~ 213 (265)
T PRK10575 135 VGLK-PLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAAR 213 (265)
T ss_pred cCCH-HHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 8885 567888999999999999999999999999999999999999999988887742 48999999999999999
Q ss_pred hcCeEEEEcCceeEEeccChH
Q 006442 322 LCTKIVETEMGVSRTYEGNYS 342 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~ 342 (645)
+||+|+++++|++. ..|...
T Consensus 214 ~~d~i~~l~~G~i~-~~~~~~ 233 (265)
T PRK10575 214 YCDYLVALRGGEMI-AQGTPA 233 (265)
T ss_pred hCCEEEEEECCeEE-EecCHH
Confidence 99999999999973 445543
No 206
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=3.6e-41 Score=372.67 Aligned_cols=206 Identities=40% Similarity=0.658 Sum_probs=183.2
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecccchhccchhhcCC
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALD 502 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~q~~~~~l~ 502 (645)
.+|+++|+++.|+++++|+++||+|.+|+++||||+||||||||||+|+|...|++|+|.+.+. +..+|+.|++ .+.
T Consensus 2 ~~i~~~~ls~~~g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-~~v~~l~Q~~--~~~ 78 (530)
T COG0488 2 SMITLENLSLAYGDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-LRVGYLSQEP--PLD 78 (530)
T ss_pred ceEEEeeeEEeeCCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-ceEEEeCCCC--CcC
Confidence 3699999999999999999999999999999999999999999999999999999999998753 5678888764 345
Q ss_pred CCCCHHHHHHhhhcc-----------------------------------cc-HHHHHHHHhhcCCChhhhccCcCcCCH
Q 006442 503 LDKTVLETVAEAAED-----------------------------------WR-IDDIKGLLGRCNFKADMLDRKVSLLSG 546 (645)
Q Consensus 503 ~~~tv~e~v~~~~~~-----------------------------------~~-~~~~~~~L~~~~l~~~~~~~~~~~LSg 546 (645)
...||.+.+..+... |. ..++..+|..+|+... ++++++|||
T Consensus 79 ~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~--~~~~~~LSG 156 (530)
T COG0488 79 PEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE--DRPVSSLSG 156 (530)
T ss_pred CCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc--cCchhhcCH
Confidence 567888887654210 11 1356778888999643 899999999
Q ss_pred hHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChh
Q 006442 547 GEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (645)
Q Consensus 547 Gqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~ 626 (645)
|||.||+||+||+.+|++|||||||||||.++..+|.+.|.++.+|||+||||.+|+.++|++|+.++.|++..|.|+|+
T Consensus 157 G~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny~ 236 (530)
T COG0488 157 GWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVATHILELDRGKLTPYKGNYS 236 (530)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhhheEEecCCceeEecCCHH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHHHHh
Q 006442 627 QVQSLWF 633 (645)
Q Consensus 627 ~~~~~~~ 633 (645)
.|.+...
T Consensus 237 ~~~~~r~ 243 (530)
T COG0488 237 SYLEQKA 243 (530)
T ss_pred HHHHHHH
Confidence 9986554
No 207
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.2e-40 Score=356.20 Aligned_cols=203 Identities=27% Similarity=0.398 Sum_probs=177.7
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCe--eEEEECceecc--------cchh
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRG--GEVLLGEHNVL--------PNYF 493 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~--G~i~~~g~~~~--------~~~~ 493 (645)
.|+++|++++|+++.+|+++||+|++||+++|+|||||||||||++|+|+++|++ |+|.++|.++. .+|+
T Consensus 5 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig~v 84 (362)
T TIGR03258 5 GIRIDHLRVAYGANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLALL 84 (362)
T ss_pred EEEEEEEEEEECCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEEEE
Confidence 4899999999998889999999999999999999999999999999999999999 99999998752 2455
Q ss_pred ccchhhcCCCCCCHHHHHHhhhccc--c----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEe
Q 006442 494 EQNQAEALDLDKTVLETVAEAAEDW--R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~~~--~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 567 (645)
.|+ ..+++.+||.+|+.++.... . ..++.++++.+++. +..++++.+|||||||||+|||||+.+|++|||
T Consensus 85 fQ~--~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~-~~~~~~~~~LSgGq~QRvaLARAL~~~P~llLL 161 (362)
T TIGR03258 85 FQN--YALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLG-DAAAHLPAQLSGGMQQRIAIARAIAIEPDVLLL 161 (362)
T ss_pred ECC--cccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCC-chhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 554 45778899999998764311 1 23577899999995 678999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc-----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 568 DEPTNHLDIPSKEMLEEAISEY-----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 568 DEPt~~LD~~s~~~l~~~l~~~-----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
||||++||+.++..|.+.|++. +.|+|+||||++++..+||||++|++|++.. .|+.+++..
T Consensus 162 DEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~-~g~~~~~~~ 228 (362)
T TIGR03258 162 DEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAA-HGEPQALYD 228 (362)
T ss_pred cCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHh
Confidence 9999999999999999988643 4699999999999999999999999999985 466666543
No 208
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-40 Score=332.45 Aligned_cols=193 Identities=25% Similarity=0.436 Sum_probs=168.8
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc------cchhccchh
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------PNYFEQNQA 498 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------~~~~~q~~~ 498 (645)
|+++|+++.|+++.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q~-- 78 (210)
T cd03269 1 LEVENVTKRFGRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPEE-- 78 (210)
T ss_pred CEEEEEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEeccC--
Confidence 47899999998888999999999999999999999999999999999999999999999997652 2455554
Q ss_pred hcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCC
Q 006442 499 EALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTN 572 (645)
Q Consensus 499 ~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~ 572 (645)
..+.+..|+.+|+...... ...+.+.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||+
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~~lllDEP~~ 157 (210)
T cd03269 79 RGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELS-EYANKRVEELSKGNQQKVQFIAAVIHDPELLILDEPFS 157 (210)
T ss_pred CcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCCh-HHHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 3455678999998764321 1134577889999995 66789999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 573 HLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 573 ~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
+||+.++..+.+.|+++ +.|||++|||++++.++||++++|++|++..
T Consensus 158 ~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~ 208 (210)
T cd03269 158 GLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVL 208 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEe
Confidence 99999999999999865 4699999999999999999999999999874
No 209
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=347.79 Aligned_cols=203 Identities=26% Similarity=0.368 Sum_probs=173.8
Q ss_pred EEEEeeeeeeCC-----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------
Q 006442 425 VTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (645)
Q Consensus 425 i~~~~v~~~y~~-----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (645)
|+++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 899999999974 46999999999999999999999999999999999999999999999998652
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHc
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~ 559 (645)
.+|++|+....+ +..|+.+|+.+.... .. ...+.++++.+++..+..++++.+|||||||||+|||||+
T Consensus 83 ~~~~ig~v~q~~~~~l-~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~ 161 (290)
T PRK13634 83 LRKKVGIVFQFPEHQL-FEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLA 161 (290)
T ss_pred HHhhEEEEeeCchhhh-hhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 245666533233 357999999865321 11 2356788999999646678999999999999999999999
Q ss_pred cCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||||++|++|+++. .|+.++++
T Consensus 162 ~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~-~g~~~~~~ 234 (290)
T PRK13634 162 MEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFL-QGTPREIF 234 (290)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHHh
Confidence 999999999999999999999999998764 5699999999999999999999999999985 46666654
No 210
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=348.26 Aligned_cols=207 Identities=21% Similarity=0.284 Sum_probs=169.5
Q ss_pred cEEEEeEEEEeCCe-----eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKGV-----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~-----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------- 160 (645)
.|+++|++++|+++ ++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 6 ~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 85 (289)
T PRK13645 6 DIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKEV 85 (289)
T ss_pred eEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccccH
Confidence 49999999999764 49999999999999999999999999999999999999999999987632
Q ss_pred ----ceEEEEeccCcc-CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcH
Q 006442 161 ----MKIAFLSQEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTL 235 (645)
Q Consensus 161 ----~~i~~v~Q~~~~-~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (645)
..|+|++|++.. .+..|+.||+...... . .......
T Consensus 86 ~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~---------------~------------------------~~~~~~~ 126 (289)
T PRK13645 86 KRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVN---------------L------------------------GENKQEA 126 (289)
T ss_pred HHHhccEEEEEeCcchhhhhhHHHHHHHHHHHH---------------c------------------------CCCHHHH
Confidence 258999999742 2346999998521100 0 0001112
Q ss_pred HHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEE
Q 006442 236 DAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVI 311 (645)
Q Consensus 236 ~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIi 311 (645)
.+++.++++.++++....++++.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|++ .++|||+
T Consensus 127 ~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii 206 (289)
T PRK13645 127 YKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIM 206 (289)
T ss_pred HHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 234566778888854567889999999999999999999999999999999999999999999887642 4899999
Q ss_pred EecCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 312 ISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 312 vsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
|||+++++.++||+|+++++|++. ..|...+
T Consensus 207 isH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~ 237 (289)
T PRK13645 207 VTHNMDQVLRIADEVIVMHEGKVI-SIGSPFE 237 (289)
T ss_pred EecCHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 999999999999999999999974 4455444
No 211
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.6e-41 Score=338.03 Aligned_cols=202 Identities=23% Similarity=0.333 Sum_probs=165.7
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEEEE
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAFL 166 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~~v 166 (645)
|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (230)
T TIGR03410 1 LEVSNLNVYYGQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAYV 80 (230)
T ss_pred CEEEeEEEEeCCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEEe
Confidence 478999999998889999999999999999999999999999999999999999999987632 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.+++..|+.+|+...+... .. ...+.+.++++.+
T Consensus 81 ~q~~~~~~~~tv~~~l~~~~~~~-~~-----------------------------------------~~~~~~~~~l~~~ 118 (230)
T TIGR03410 81 PQGREIFPRLTVEENLLTGLAAL-PR-----------------------------------------RSRKIPDEIYELF 118 (230)
T ss_pred ccCCcccCCCcHHHHHHHHHHhc-Cc-----------------------------------------chHHHHHHHHHHH
Confidence 99998877789999985322100 00 0001112333333
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhh
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQL 322 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~ 322 (645)
+......++++.+||||||||++|||||+.+|++|||||||++||+.++.++.++|.+ .++|||++||+++++..+
T Consensus 119 ~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~ 198 (230)
T TIGR03410 119 PVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFAREL 198 (230)
T ss_pred HhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHh
Confidence 3212456788999999999999999999999999999999999999999999988753 479999999999999999
Q ss_pred cCeEEEEcCceeEEeccChH
Q 006442 323 CTKIVETEMGVSRTYEGNYS 342 (645)
Q Consensus 323 ~d~i~~l~~G~~~~~~g~~~ 342 (645)
||+++++++|++. ..|+.+
T Consensus 199 ~d~v~~l~~g~i~-~~~~~~ 217 (230)
T TIGR03410 199 ADRYYVMERGRVV-ASGAGD 217 (230)
T ss_pred CCEEEEEECCEEE-EECCHH
Confidence 9999999999884 455543
No 212
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=345.33 Aligned_cols=208 Identities=22% Similarity=0.371 Sum_probs=173.9
Q ss_pred cEEEEeEEEEeC-CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEE
Q 006442 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (645)
Q Consensus 97 ~i~i~nls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~ 165 (645)
+|+++|++++|+ ...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 3 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 3 LIETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred eEEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 589999999996 4569999999999999999999999999999999999999999999998742 24999
Q ss_pred EeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 166 LSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 166 v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
++|++. .++..||.+|+...... ..++.....+++.++++
T Consensus 83 v~q~~~~~~~~~tv~~~l~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~ 123 (277)
T PRK13652 83 VFQNPDDQIFSPTVEQDIAFGPIN---------------------------------------LGLDEETVAHRVSSALH 123 (277)
T ss_pred EecCcccccccccHHHHHHhHHHH---------------------------------------cCCCHHHHHHHHHHHHH
Confidence 999974 33567999998521100 00111122345667888
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHH
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLD 320 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~ 320 (645)
.+|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .|.|||++||+++++.
T Consensus 124 ~~~l~-~~~~~~~~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~ 202 (277)
T PRK13652 124 MLGLE-ELRDRVPHHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVP 202 (277)
T ss_pred HCCCh-hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH
Confidence 88986 678889999999999999999999999999999999999999999999887742 4899999999999999
Q ss_pred hhcCeEEEEcCceeEEeccChHHHH
Q 006442 321 QLCTKIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~g~~~~~~ 345 (645)
++||+|+++++|++ .+.|+.+++.
T Consensus 203 ~~~drv~~l~~G~i-~~~g~~~~~~ 226 (277)
T PRK13652 203 EMADYIYVMDKGRI-VAYGTVEEIF 226 (277)
T ss_pred HhCCEEEEEECCeE-EEECCHHHHh
Confidence 99999999999997 4567766543
No 213
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=355.03 Aligned_cols=202 Identities=29% Similarity=0.408 Sum_probs=173.8
Q ss_pred EEEEEeeeeeeC----CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------
Q 006442 424 VVTIKNLEFGYE----DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~----~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (645)
+|+++|++++|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 489999999997 367999999999999999999999999999999999999999999999998753
Q ss_pred ---cchhccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHcc
Q 006442 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (645)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~ 560 (645)
.+|++|+ ..+++..|+.+|+...... .. .+++.++++.+|+. +..++++.+|||||||||+|||||+.
T Consensus 81 ~~~ig~v~q~--~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGq~qRv~lAraL~~ 157 (343)
T PRK11153 81 RRQIGMIFQH--FNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLS-DKADRYPAQLSGGQKQRVAIARALAS 157 (343)
T ss_pred hcCEEEEeCC--CccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHHHc
Confidence 2344443 3466678999999865321 11 23567889999995 67789999999999999999999999
Q ss_pred CCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 561 ~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++|||+++|++|+++. .|..+++.
T Consensus 158 ~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~-~g~~~~~~ 229 (343)
T PRK11153 158 NPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVE-QGTVSEVF 229 (343)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHH
Confidence 99999999999999999999999999865 4699999999999999999999999999985 45555443
No 214
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=346.40 Aligned_cols=205 Identities=26% Similarity=0.400 Sum_probs=174.4
Q ss_pred EEEEEeeeeeeCC-----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------
Q 006442 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~-----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (645)
.|+++||++.|++ +++|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 3899999999974 46999999999999999999999999999999999999999999999998752
Q ss_pred ---cchhccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCC-hhhhccCcCcCCHhHHHHHHHHHHHc
Q 006442 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFK-ADMLDRKVSLLSGGEKARLAFCKFMV 559 (645)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~-~~~~~~~~~~LSgGqkqrv~lAral~ 559 (645)
.+|++|+.... .+..|+.+|+.+.... .. .+.+..+++.+|+. .+..++++.+||||||||++|||||+
T Consensus 82 ~~~ig~v~q~~~~~-~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~ 160 (287)
T PRK13637 82 RKKVGLVFQYPEYQ-LFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVA 160 (287)
T ss_pred hhceEEEecCchhc-cccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHH
Confidence 24556653222 2467999999864321 11 23577899999995 25678999999999999999999999
Q ss_pred cCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||||++|++|++.. .|+.+++++
T Consensus 161 ~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~-~g~~~~~~~ 234 (287)
T PRK13637 161 MEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCEL-QGTPREVFK 234 (287)
T ss_pred cCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHHHh
Confidence 999999999999999999999999999764 4699999999999999999999999999985 466666543
No 215
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=6.8e-41 Score=334.61 Aligned_cols=191 Identities=30% Similarity=0.421 Sum_probs=165.9
Q ss_pred EEEEEeeeeeeC-CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-------------
Q 006442 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~-~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------- 489 (645)
+|+++|+++.|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 1 MIEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred CEEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 478999999994 678999999999999999999999999999999999999999999999998652
Q ss_pred cchhccchhhcCCCCCCHHHHHHhhhc------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCC
Q 006442 490 PNYFEQNQAEALDLDKTVLETVAEAAE------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (645)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~v~~~~~------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 563 (645)
.+|++|. ..+++..|+.+|+..... ....+++.++++.+++. +..++++.+|||||||||+|||||+.+|+
T Consensus 81 i~~~~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (214)
T TIGR02673 81 IGVVFQD--FRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLE-HKADAFPEQLSGGEQQRVAIARAIVNSPP 157 (214)
T ss_pred eEEEecC--hhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhCCCC
Confidence 1233443 345567899999876421 11234578899999995 56789999999999999999999999999
Q ss_pred eEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCe
Q 006442 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSN 617 (645)
Q Consensus 564 lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~ 617 (645)
+|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+
T Consensus 158 lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 158 LLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999864 5699999999999999999999999884
No 216
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2e-40 Score=351.21 Aligned_cols=208 Identities=24% Similarity=0.421 Sum_probs=177.4
Q ss_pred CCcEEEEEeeeeeeCC-------------eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECcee
Q 006442 421 GRSVVTIKNLEFGYED-------------RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHN 487 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~-------------~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~ 487 (645)
.+++|+++|+++.|+. ..+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 5 ~~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~ 84 (331)
T PRK15079 5 KKVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKD 84 (331)
T ss_pred CCceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEE
Confidence 3568999999999962 468999999999999999999999999999999999999999999999987
Q ss_pred cc-------------cchhccchhhcCCCCCCHHHHHHhhhc----ccc----HHHHHHHHhhcCCChhhhccCcCcCCH
Q 006442 488 VL-------------PNYFEQNQAEALDLDKTVLETVAEAAE----DWR----IDDIKGLLGRCNFKADMLDRKVSLLSG 546 (645)
Q Consensus 488 ~~-------------~~~~~q~~~~~l~~~~tv~e~v~~~~~----~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSg 546 (645)
+. .+|+.|+....+++..|+.+|+.+... ... .+.+.++|+.+++..+..++++++|||
T Consensus 85 i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSg 164 (331)
T PRK15079 85 LLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSG 164 (331)
T ss_pred CCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCH
Confidence 52 235566543357778999999875321 111 234678899999965678999999999
Q ss_pred hHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeC
Q 006442 547 GEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYA 622 (645)
Q Consensus 547 Gqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~ 622 (645)
||||||+|||||+.+|++|||||||++||+.++..+.++|++. +.|+|+||||++++.++||||++|++|++++.
T Consensus 165 G~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive~- 243 (331)
T PRK15079 165 GQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVEL- 243 (331)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE-
Confidence 9999999999999999999999999999999999999988754 56999999999999999999999999999864
Q ss_pred CChhHHH
Q 006442 623 GDYNQVQ 629 (645)
Q Consensus 623 ~~~~~~~ 629 (645)
|+.++++
T Consensus 244 g~~~~i~ 250 (331)
T PRK15079 244 GTYDEVY 250 (331)
T ss_pred cCHHHHH
Confidence 5555544
No 217
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=340.40 Aligned_cols=208 Identities=22% Similarity=0.298 Sum_probs=168.5
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC----------
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~---------- 160 (645)
.+|+++|++++|++.++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 6 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 85 (254)
T PRK14273 6 AIIETENLNLFYTDFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILE 85 (254)
T ss_pred ceEEEeeeEEEeCCceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHH
Confidence 369999999999888899999999999999999999999999999999999987 48999987632
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
..|+|++|++.++ ..||+||+....... . .......+++
T Consensus 86 ~~~~i~~v~q~~~~~-~~tv~eni~~~~~~~---------------~-----------------------~~~~~~~~~~ 126 (254)
T PRK14273 86 LRRKIGMVFQTPNPF-LMSIYDNISYGPKIH---------------G-----------------------TKDKKKLDEI 126 (254)
T ss_pred HhhceEEEeeccccc-cCcHHHHHHHHHHhc---------------C-----------------------CCCHHHHHHH
Confidence 2499999998876 589999985321100 0 0000112233
Q ss_pred HHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006442 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (645)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (645)
+.++++.+|+. .+..++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||++|
T Consensus 127 ~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~s 206 (254)
T PRK14273 127 VEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVT 206 (254)
T ss_pred HHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 44555555552 1346778999999999999999999999999999999999999999999887753 368999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
|+++++..+||+|+++++|++. ..|...+
T Consensus 207 H~~~~~~~~~d~i~~l~~G~i~-~~g~~~~ 235 (254)
T PRK14273 207 HNMQQAGRISDRTAFFLNGCIE-EESSTDE 235 (254)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 9999999999999999999984 4455443
No 218
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=344.51 Aligned_cols=206 Identities=26% Similarity=0.388 Sum_probs=171.2
Q ss_pred cEEEEeEEEEeC-CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEE
Q 006442 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIA 164 (645)
Q Consensus 97 ~i~i~nls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~ 164 (645)
+|+++|++++|+ +.++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..|+
T Consensus 1 ml~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 1 MIRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred CEEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 378999999995 4679999999999999999999999999999999999999999999988642 2499
Q ss_pred EEeccCcc-CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhc
Q 006442 165 FLSQEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (645)
Q Consensus 165 ~v~Q~~~~-~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (645)
|++|++.. ++..|+.+|+...... ...+.....+++.+++
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~---------------------------------------~~~~~~~~~~~~~~~l 121 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPEN---------------------------------------LCLPPIEIRKRVDRAL 121 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHH---------------------------------------cCCCHHHHHHHHHHHH
Confidence 99999863 4568999998521100 0011122334566778
Q ss_pred hhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHH
Q 006442 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLD 320 (645)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~ 320 (645)
+.+|+. +..++++.+||||||||++|||||+.+|+||||||||+|||+.++..+.+.|+ +.|.|||++|||++++.
T Consensus 122 ~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~ 200 (274)
T PRK13644 122 AEIGLE-KYRHRSPKTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELH 200 (274)
T ss_pred HHCCCH-HHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHh
Confidence 888885 56788999999999999999999999999999999999999999999988774 35899999999999995
Q ss_pred hhcCeEEEEcCceeEEeccChHHH
Q 006442 321 QLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
.||+|+++++|++. +.|+..++
T Consensus 201 -~~d~v~~l~~G~i~-~~g~~~~~ 222 (274)
T PRK13644 201 -DADRIIVMDRGKIV-LEGEPENV 222 (274)
T ss_pred -hCCEEEEEECCEEE-EECCHHHH
Confidence 59999999999974 55665544
No 219
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=343.39 Aligned_cols=216 Identities=21% Similarity=0.371 Sum_probs=176.8
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCC---ccEEEEcCCC------------
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD---SGNVIKAKSN------------ 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~---~G~I~~~~~~------------ 160 (645)
++|+++|++++|+++++|+++||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|..
T Consensus 3 ~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (262)
T PRK09984 3 TIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIR 82 (262)
T ss_pred cEEEEeeEEEEeCCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHH
Confidence 4699999999999889999999999999999999999999999999999999986 4999988742
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..++|++|++.+++..|+.+|+........... ... . .......+.
T Consensus 83 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~-------~~~-----------------------~-~~~~~~~~~ 131 (262)
T PRK09984 83 KSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFW-------RTC-----------------------F-SWFTREQKQ 131 (262)
T ss_pred HHHhheEEEccccccccCCcHHHHHHhhhcccccch-------hhh-----------------------c-ccccHHHHH
Confidence 148999999988788899999853210000000 000 0 000012234
Q ss_pred HHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 006442 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (645)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivs 313 (645)
++.++++.+|+. ...++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++ .|.|||++|
T Consensus 132 ~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~t 210 (262)
T PRK09984 132 RALQALTRVGMV-HFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTL 210 (262)
T ss_pred HHHHHHHHcCCH-HHHhCCccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 567788888986 577889999999999999999999999999999999999999999999888753 479999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
||++++..+||+|+++++|++ .+.|+++++
T Consensus 211 H~~~~~~~~~d~i~~l~~g~i-~~~g~~~~~ 240 (262)
T PRK09984 211 HQVDYALRYCERIVALRQGHV-FYDGSSQQF 240 (262)
T ss_pred CCHHHHHHhCCEEEEEECCEE-EEeCCHHHh
Confidence 999999999999999999998 566776653
No 220
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.7e-39 Score=390.33 Aligned_cols=315 Identities=20% Similarity=0.246 Sum_probs=187.4
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHH---------HHHcCCCCCccEEEEcCCCceEEEEe
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLR---------IIAGQEEPDSGNVIKAKSNMKIAFLS 167 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~---------~l~G~~~p~~G~I~~~~~~~~i~~v~ 167 (645)
.|++++++. ..|+++||+|++|++++|+|+||||||||++ .|.|...+..+ +.. +.-.++-++.
T Consensus 600 ~L~l~~~~~-----~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~-i~g-~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-----HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLS-IQW-GAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-----CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCccccc-ccc-cccceeEEec
Confidence 588888863 3799999999999999999999999999999 56665433211 111 1112456666
Q ss_pred ccCccCC-C---CC---HHHHHHHhhHHHHHH-HHHHHHHHHHHh-------hc---c-------c-------------h
Q 006442 168 QEFEVSM-S---RT---VREEFMSAFKEEMEI-AGKLERVQKALE-------SA---V-------D-------------D 209 (645)
Q Consensus 168 Q~~~~~~-~---~T---v~eni~~~~~~~~~~-~~~~~~~~~~~~-------~~---~-------~-------------~ 209 (645)
|.|.--. . .| +++.|...|....+. ..........+. .| . + .
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 7653211 1 11 444444332210000 000000000000 00 0 0 0
Q ss_pred hHHHHhHHHHH---HHHH---HHH--HhCChhcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHc---cCC
Q 006442 210 MDLMGRLLDEF---DLLQ---RKA--QAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILL---QDP 278 (645)
Q Consensus 210 ~~~~~~~~~~~---~~~~---~~~--~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~---~~p 278 (645)
.+.++..++.. +.+. ... ...+...+.+++ ++|..+|+.....++++.+|||||+||++||+||+ .+|
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~~~~~P 831 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLAPSKKP 831 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhhcCCCC
Confidence 00110000000 0000 000 011223455566 47888999632368899999999999999999997 699
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEEc------CceeEEeccChHHHHHHHH
Q 006442 279 DLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVETE------MGVSRTYEGNYSQYVLEKA 349 (645)
Q Consensus 279 ~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~i~~l~------~G~~~~~~g~~~~~~~~~~ 349 (645)
++|||||||+|||+.+++.|.++|+ +.|.|||+|||+++++ .+||++++|. +|++ ...|+.+++.....
T Consensus 832 ~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i-~~aDrVi~L~p~gg~~~G~i-v~~Gtpeel~~~~s 909 (1809)
T PRK00635 832 TLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVV-KVADYVLELGPEGGNLGGYL-LASCSPEELIHLHT 909 (1809)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HhCCEEEEEccCCCCCCCEE-EEeCCHHHHHhccC
Confidence 9999999999999999999988774 4689999999999999 7999999995 4555 45666554321100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHHhhhhcccccccceEEeccCCCCCCCcEEEEEe
Q 006442 350 AWIESQYAAWEKQQREIEQTKDLINRLGAGANSGRASSAEKKLERLQEEEQIEKPFQRKQMKIRFPERGRSGRSVVTIKN 429 (645)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~ 429 (645)
.. . . .+...+.. . . ..+ ... |+.. .. ++..+
T Consensus 910 ~t-----~------~---~l~~~l~~-------------------~---~--~~~------~~~-~~~~---~~-l~~~~ 940 (1809)
T PRK00635 910 PT-----A------K---ALRPYLSS-------------------P---Q--ELP------YLP-DPSP---KP-PVPAD 940 (1809)
T ss_pred ch-----H------H---HHHHHhhc-------------------c---c--ccc------ccc-cccc---cc-cccce
Confidence 00 0 0 00000000 0 0 000 000 1100 11 44556
Q ss_pred eeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHH
Q 006442 430 LEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLI 470 (645)
Q Consensus 430 v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l 470 (645)
+++.+.....|+++||+|++|++++|+|+||||||||+..+
T Consensus 941 i~i~~~~~~~lk~isl~i~~gei~~itG~nGsGKStL~~~~ 981 (1809)
T PRK00635 941 ITIKNAYQHNLKHIDLSLPRNALTAVTGPSASGKHSLVFDI 981 (1809)
T ss_pred EEEeccccccccceeEEecCCcEEEEECCCCCChhHHHHHH
Confidence 66666545679999999999999999999999999977665
No 221
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.3e-40 Score=335.60 Aligned_cols=197 Identities=26% Similarity=0.449 Sum_probs=166.7
Q ss_pred EEEEEeeeeeeCCe----eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------
Q 006442 424 VVTIKNLEFGYEDR----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~~----~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (645)
+|+++||+++|+++ ++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIR 80 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHh
Confidence 47899999999765 7999999999999999999999999999999999999999999999997652
Q ss_pred ---cchhccchhhcCCCCCCHHHHHHhhhcc----ccH---HH-HHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHH
Q 006442 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED----WRI---DD-IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (645)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~v~~~~~~----~~~---~~-~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral 558 (645)
.+|++|+....+.+..|+.+|+...... ... .. +.++++.+++.....++++.+|||||||||+|||||
T Consensus 81 ~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral 160 (228)
T cd03257 81 RKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIARAL 160 (228)
T ss_pred hccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHHHH
Confidence 1244444322355678999998753211 111 11 247889999854567899999999999999999999
Q ss_pred ccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
+.+|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|++..
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 226 (228)
T cd03257 161 ALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVE 226 (228)
T ss_pred hcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEe
Confidence 9999999999999999999999999999764 4699999999999999999999999999874
No 222
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.1e-40 Score=347.77 Aligned_cols=204 Identities=23% Similarity=0.383 Sum_probs=179.1
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------cchhc
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFE 494 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~~ 494 (645)
.++++|++++|+++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|++
T Consensus 2 ~l~~~~l~~~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~~~ 81 (301)
T TIGR03522 2 SIRVSSLTKLYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGYLP 81 (301)
T ss_pred EEEEEEEEEEECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEEec
Confidence 489999999999888999999999999999999999999999999999999999999999998752 24555
Q ss_pred cchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEee
Q 006442 495 QNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (645)
Q Consensus 495 q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 568 (645)
|. ..+++..|+.+|+...... .. ..++..+++.+|+. +..++++..|||||||||+|||||+.+|++||||
T Consensus 82 q~--~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lliLD 158 (301)
T TIGR03522 82 EH--NPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLR-PEQHKKIGQLSKGYRQRVGLAQALIHDPKVLILD 158 (301)
T ss_pred CC--CCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCc-hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 54 3566778999998754321 11 34578899999995 5679999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 569 EPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 569 EPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
|||+|||+.+++.+.+.|+++ +.|||++||+++++.++|||+++|++|++.. .|+.+++...
T Consensus 159 EPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~~ 222 (301)
T TIGR03522 159 EPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVA-DKKLDELSAA 222 (301)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHHHh
Confidence 999999999999999999876 4699999999999999999999999999984 6888887553
No 223
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=343.30 Aligned_cols=211 Identities=24% Similarity=0.315 Sum_probs=174.7
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEE
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~ 165 (645)
..|+++|++++|+++.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 6 ~~l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 85 (265)
T PRK10253 6 ARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIGL 85 (265)
T ss_pred cEEEEEEEEEEECCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhheEE
Confidence 35999999999998889999999999999999999999999999999999999999999998742 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.+++..|+.+|+.......... +. ........++.++++.
T Consensus 86 v~q~~~~~~~~tv~~~~~~~~~~~~~~----------~~-------------------------~~~~~~~~~~~~~l~~ 130 (265)
T PRK10253 86 LAQNATTPGDITVQELVARGRYPHQPL----------FT-------------------------RWRKEDEEAVTKAMQA 130 (265)
T ss_pred eeccCcCCCCCcHHHHHHhCccccccc----------cc-------------------------CCCHHHHHHHHHHHHH
Confidence 999998877889999985321000000 00 0000112345677888
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHh
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~ 321 (645)
+|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|++ .+.|||++|||++++.+
T Consensus 131 ~~l~-~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~ 209 (265)
T PRK10253 131 TGIT-HLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACR 209 (265)
T ss_pred cCCH-HHhcCCcccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 8885 567899999999999999999999999999999999999999999999887743 48899999999999999
Q ss_pred hcCeEEEEcCceeEEeccChHH
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+||+++++++|++. ..|...+
T Consensus 210 ~~d~i~~l~~G~i~-~~g~~~~ 230 (265)
T PRK10253 210 YASHLIALREGKIV-AQGAPKE 230 (265)
T ss_pred hCCEEEEEECCEEE-EeCCHHH
Confidence 99999999999974 4555443
No 224
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-40 Score=349.64 Aligned_cols=208 Identities=24% Similarity=0.326 Sum_probs=175.2
Q ss_pred CCCcEEEEEeeeeeeCC-----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----
Q 006442 420 SGRSVVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----- 489 (645)
Q Consensus 420 ~~~~~i~~~~v~~~y~~-----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----- 489 (645)
++.++|+++|+++.|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 17 ~~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~ 96 (320)
T PRK13631 17 SDDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNN 96 (320)
T ss_pred CCCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccc
Confidence 45678999999999974 36999999999999999999999999999999999999999999999986542
Q ss_pred ---------------------cchhccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcC
Q 006442 490 ---------------------PNYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVS 542 (645)
Q Consensus 490 ---------------------~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~ 542 (645)
.+|+.|+....+ +..|+.+|+.++... . ....+..+++.+++..+..++.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l-~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~ 175 (320)
T PRK13631 97 HELITNPYSKKIKNFKELRRRVSMVFQFPEYQL-FKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSPF 175 (320)
T ss_pred ccccccccccccchHHHHHhcEEEEEECchhcc-ccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCcc
Confidence 123444432233 356999999765321 1 123467889999996456789999
Q ss_pred cCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEE
Q 006442 543 LLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQ 619 (645)
Q Consensus 543 ~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~ 619 (645)
+|||||||||+|||||+++|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+|||+++|++|+++
T Consensus 176 ~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~ 255 (320)
T PRK13631 176 GLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKIL 255 (320)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999754 469999999999999999999999999998
Q ss_pred eeCCChhHHH
Q 006442 620 DYAGDYNQVQ 629 (645)
Q Consensus 620 ~~~~~~~~~~ 629 (645)
. .|+.++++
T Consensus 256 ~-~g~~~~~~ 264 (320)
T PRK13631 256 K-TGTPYEIF 264 (320)
T ss_pred E-eCCHHHHh
Confidence 5 46666554
No 225
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2e-40 Score=340.62 Aligned_cols=206 Identities=23% Similarity=0.350 Sum_probs=175.8
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc------------
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------ 489 (645)
+..|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 ~~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 82 (257)
T PRK10619 3 ENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVA 82 (257)
T ss_pred CccEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccccc
Confidence 45699999999999889999999999999999999999999999999999999999999999997652
Q ss_pred -----------cchhccchhhcCCCCCCHHHHHHhhhc---c----ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHH
Q 006442 490 -----------PNYFEQNQAEALDLDKTVLETVAEAAE---D----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKAR 551 (645)
Q Consensus 490 -----------~~~~~q~~~~~l~~~~tv~e~v~~~~~---~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqr 551 (645)
.+|++|+ ..+.+..|+.+|+..... . ....++.++++.+|+.....++++.+||||||||
T Consensus 83 ~~~~~~~~~~~i~~v~q~--~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~qr 160 (257)
T PRK10619 83 DKNQLRLLRTRLTMVFQH--FNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQR 160 (257)
T ss_pred cchHHHHHhhceEEEecC--cccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHH
Confidence 1334443 345566899999875321 1 1124577899999996433478899999999999
Q ss_pred HHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHH
Q 006442 552 LAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQV 628 (645)
Q Consensus 552 v~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~ 628 (645)
++|||||+.+|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++..+|||+++|++|+++. .++.+++
T Consensus 161 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 239 (257)
T PRK10619 161 VSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEE-EGAPEQL 239 (257)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE-eCCHHHh
Confidence 99999999999999999999999999999999998765 4699999999999999999999999999985 5777776
Q ss_pred HH
Q 006442 629 QS 630 (645)
Q Consensus 629 ~~ 630 (645)
.+
T Consensus 240 ~~ 241 (257)
T PRK10619 240 FG 241 (257)
T ss_pred hh
Confidence 53
No 226
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-40 Score=336.64 Aligned_cols=201 Identities=28% Similarity=0.422 Sum_probs=172.8
Q ss_pred EEEEEeeeeeeCCe----eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceeccc---------
Q 006442 424 VVTIKNLEFGYEDR----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP--------- 490 (645)
Q Consensus 424 ~i~~~~v~~~y~~~----~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~--------- 490 (645)
+|+++|++++|+++ ++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 1 ~i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (233)
T cd03258 1 MIELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKA 80 (233)
T ss_pred CeEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHH
Confidence 47899999999876 89999999999999999999999999999999999999999999999987521
Q ss_pred ----chhccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHcc
Q 006442 491 ----NYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (645)
Q Consensus 491 ----~~~~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~ 560 (645)
+|++|+ ..+++..|+.+|+...... . ....+.++++.+++. +..++++.+|||||||||+|||||+.
T Consensus 81 ~~~i~~~~q~--~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~ 157 (233)
T cd03258 81 RRRIGMIFQH--FNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLE-DKADAYPAQLSGGQKQRVGIARALAN 157 (233)
T ss_pred HhheEEEccC--cccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCh-hhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 233333 3455678999998764321 1 123577889999994 66789999999999999999999999
Q ss_pred CCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHH
Q 006442 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQV 628 (645)
Q Consensus 561 ~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~ 628 (645)
+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .++.+++
T Consensus 158 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 228 (233)
T cd03258 158 NPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVE-EGTVEEV 228 (233)
T ss_pred CCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHH
Confidence 99999999999999999999999999764 4599999999999999999999999999985 4665554
No 227
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=341.00 Aligned_cols=211 Identities=18% Similarity=0.285 Sum_probs=171.2
Q ss_pred CCccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC--------
Q 006442 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN-------- 160 (645)
Q Consensus 94 ~~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~-------- 160 (645)
.+..|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 16 ~~~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~ 95 (267)
T PRK14235 16 TEIKMRARDVSVFYGEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDV 95 (267)
T ss_pred CCceEEEEeEEEEECCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccch
Confidence 34569999999999988899999999999999999999999999999999999975 89999987632
Q ss_pred ----ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHH
Q 006442 161 ----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (645)
Q Consensus 161 ----~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (645)
..++|++|++.+++ .|+.||+....... .+. .......
T Consensus 96 ~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~------------~~~-------------------------~~~~~~~ 137 (267)
T PRK14235 96 VELRARVGMVFQKPNPFP-KSIYENVAYGPRIH------------GLA-------------------------RSKAELD 137 (267)
T ss_pred HHHhhceEEEecCCCCCC-CcHHHHHHHHHHhc------------ccc-------------------------cchHHHH
Confidence 24899999988765 59999985321000 000 0001123
Q ss_pred HHHHhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEE
Q 006442 237 AKVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVI 311 (645)
Q Consensus 237 ~~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIi 311 (645)
.++.++++.+|+.. ...++++.+||||||||++|||||+.+|++|||||||++||+.++.++.++|++ .+.|||+
T Consensus 138 ~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiii 217 (267)
T PRK14235 138 EIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVI 217 (267)
T ss_pred HHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEE
Confidence 34556777777742 245778999999999999999999999999999999999999999999988753 3689999
Q ss_pred EecCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 312 ISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 312 vsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+||+++++..+||+++++++|++. ..|...+
T Consensus 218 vtH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~ 248 (267)
T PRK14235 218 VTHSMQQAARVSQRTAFFHLGNLV-EVGDTEK 248 (267)
T ss_pred EEcCHHHHHhhCCEEEEEECCEEE-EeCCHHH
Confidence 999999999999999999999984 4455443
No 228
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.8e-40 Score=338.72 Aligned_cols=209 Identities=25% Similarity=0.405 Sum_probs=171.0
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------------- 160 (645)
+|+++|++++|++..+|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 82 (253)
T TIGR02323 3 LLQVSGLSKSYGGGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAERRR 82 (253)
T ss_pred eEEEeeeEEEeCCceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHHHH
Confidence 5999999999988889999999999999999999999999999999999999999999997643
Q ss_pred ---ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcH
Q 006442 161 ---MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTL 235 (645)
Q Consensus 161 ---~~i~~v~Q~~~--~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (645)
..++|++|++. +.+..|+.+|+...+.. ... ......
T Consensus 83 ~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~--------------~~~------------------------~~~~~~ 124 (253)
T TIGR02323 83 LMRTEWGFVHQNPRDGLRMRVSAGANIGERLMA--------------IGA------------------------RHYGNI 124 (253)
T ss_pred hhhcceEEEEeCcccccCccccHHHHHHHHHHH--------------hcc------------------------cchHHH
Confidence 14899999974 33456888887421100 000 000011
Q ss_pred HHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEE
Q 006442 236 DAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVI 311 (645)
Q Consensus 236 ~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIi 311 (645)
+..+.++++.+|+.....++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|+ +.+.|||+
T Consensus 125 ~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~ 204 (253)
T TIGR02323 125 RAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVII 204 (253)
T ss_pred HHHHHHHHHHcCCChhhhhcCchhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 24556778888886456788899999999999999999999999999999999999999999988774 24899999
Q ss_pred EecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 312 ISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 312 vsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
|||+++++..+||+++++++|++. ..|...++
T Consensus 205 vsH~~~~~~~~~d~~~~l~~G~i~-~~~~~~~~ 236 (253)
T TIGR02323 205 VTHDLGVARLLAQRLLVMQQGRVV-ESGLTDQV 236 (253)
T ss_pred EeCCHHHHHHhcCEEEEEECCEEE-EECCHHHH
Confidence 999999999999999999999984 44554443
No 229
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.4e-40 Score=382.43 Aligned_cols=211 Identities=30% Similarity=0.488 Sum_probs=183.9
Q ss_pred CCccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccC-cc
Q 006442 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEF-EV 172 (645)
Q Consensus 94 ~~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~-~~ 172 (645)
...+|+++|++++|+++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+ +....|||++|++ .+
T Consensus 316 ~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~~i~y~~q~~~~l 394 (635)
T PRK11147 316 GKIVFEMENVNYQIDGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKLEVAYFDQHRAEL 394 (635)
T ss_pred CCceEEEeeeEEEECCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCcEEEEEeCccccc
Confidence 345799999999999888999999999999999999999999999999999999999999998 5567899999986 46
Q ss_pred CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCccc
Q 006442 173 SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADD 252 (645)
Q Consensus 173 ~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~ 252 (645)
++..||.+|+...... .........+.+++..+++..+.
T Consensus 395 ~~~~tv~e~l~~~~~~-----------------------------------------~~~~~~~~~~~~~l~~~~l~~~~ 433 (635)
T PRK11147 395 DPEKTVMDNLAEGKQE-----------------------------------------VMVNGRPRHVLGYLQDFLFHPKR 433 (635)
T ss_pred CCCCCHHHHHHhhccc-----------------------------------------ccccchHHHHHHHHHhcCCCHHH
Confidence 6788999998532100 00000123456778888886566
Q ss_pred ccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEc-C
Q 006442 253 GDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETE-M 331 (645)
Q Consensus 253 ~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~i~~l~-~ 331 (645)
.++++.+|||||||||+|||||+.+|++|||||||||||+.+++.|.++|++.+.|||+||||++++..+||+|++++ +
T Consensus 434 ~~~~~~~LSgGekqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vSHd~~~~~~~~d~i~~l~~~ 513 (635)
T PRK11147 434 AMTPVKALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSYQGTVLLVSHDRQFVDNTVTECWIFEGN 513 (635)
T ss_pred HhChhhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhcCEEEEEeCC
Confidence 789999999999999999999999999999999999999999999999998888899999999999999999999997 8
Q ss_pred ceeEEeccChHHHHH
Q 006442 332 GVSRTYEGNYSQYVL 346 (645)
Q Consensus 332 G~~~~~~g~~~~~~~ 346 (645)
|++..|.|+|+.|..
T Consensus 514 g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 514 GKIGRYVGGYHDARQ 528 (635)
T ss_pred CeEEEccCCHHHHHH
Confidence 999999999999854
No 230
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-40 Score=339.53 Aligned_cols=209 Identities=21% Similarity=0.318 Sum_probs=170.9
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~----------- 160 (645)
.|+++|++++|++.++|+++||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 4 ~l~i~~v~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~ 83 (258)
T PRK14241 4 RIDVKDLNIYYGSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAV 83 (258)
T ss_pred cEEEeeEEEEECCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHH
Confidence 58999999999988899999999999999999999999999999999999974 79999997642
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..++|++|++.+++..|+.+|+...+... . .......++++
T Consensus 84 ~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~---------------~-----------------------~~~~~~~~~~~ 125 (258)
T PRK14241 84 RRTIGMVFQRPNPFPTMSIRDNVVAGLKLN---------------G-----------------------VRNKKDLDELV 125 (258)
T ss_pred hcceEEEccccccCCCCcHHHHHHHHHHhc---------------C-----------------------CCCHHHHHHHH
Confidence 24999999988877889999985321100 0 00011223345
Q ss_pred HhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006442 240 SKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (645)
Q Consensus 240 ~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (645)
.++++.+|+. .+..++++.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .++|||++||
T Consensus 126 ~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH 205 (258)
T PRK14241 126 EKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTH 205 (258)
T ss_pred HHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEec
Confidence 5667777763 2356788999999999999999999999999999999999999999999888753 3689999999
Q ss_pred CHHHHHhhcCeEEEEc------CceeEEeccChHHH
Q 006442 315 DRAFLDQLCTKIVETE------MGVSRTYEGNYSQY 344 (645)
Q Consensus 315 d~~~l~~~~d~i~~l~------~G~~~~~~g~~~~~ 344 (645)
+++++.++||+|++++ +|++. ..|+..+.
T Consensus 206 ~~~~~~~~~d~i~~l~~~~~~~~g~i~-~~~~~~~~ 240 (258)
T PRK14241 206 NMQQAARVSDQTAFFNLEATGKPGRLV-EIDDTEKI 240 (258)
T ss_pred CHHHHHHhCCEEEEEecccCCCCceEE-ecCCHHHH
Confidence 9999999999999996 68773 45665443
No 231
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-40 Score=340.51 Aligned_cols=209 Identities=22% Similarity=0.293 Sum_probs=169.8
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC----------
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN---------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~---------- 160 (645)
..|+++|++++|++.++|+|+||+|++|++++|+||||||||||+++|+|+++ |++|+|.++|..
T Consensus 12 ~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~ 91 (260)
T PRK10744 12 SKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIAL 91 (260)
T ss_pred ceEEEEEEEEEeCCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHH
Confidence 45999999999998889999999999999999999999999999999999986 589999987632
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
.+|+|++|++.+++ .|+++|+....... . ..+.....++
T Consensus 92 ~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~--------------~------------------------~~~~~~~~~~ 132 (260)
T PRK10744 92 LRAKVGMVFQKPTPFP-MSIYDNIAFGVRLF--------------E------------------------KLSRAEMDER 132 (260)
T ss_pred HhcceEEEecCCccCc-CcHHHHHhhhHhhc--------------C------------------------CCCHHHHHHH
Confidence 25999999987755 89999985321100 0 0011122334
Q ss_pred HHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006442 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (645)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (645)
+.++++.+|+. ....++.+.+||||||||++|||||+.+|++|||||||++||+.+++.+.+.|++ .+.|||++|
T Consensus 133 ~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~s 212 (260)
T PRK10744 133 VEWALTKAALWNEVKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVT 212 (260)
T ss_pred HHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 55666777763 1345778899999999999999999999999999999999999999999888753 368999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
|+++++..+||+++++++|++. ..|..+++
T Consensus 213 H~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 242 (260)
T PRK10744 213 HNMQQAARCSDYTAFMYLGELI-EFGNTDTI 242 (260)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999984 44554443
No 232
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=348.01 Aligned_cols=204 Identities=23% Similarity=0.300 Sum_probs=173.6
Q ss_pred EEEEEeeeeeeCCe-----eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceec----------
Q 006442 424 VVTIKNLEFGYEDR-----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV---------- 488 (645)
Q Consensus 424 ~i~~~~v~~~y~~~-----~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~---------- 488 (645)
+|+++|+++.|++. ++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+.
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 48999999999743 599999999999999999999999999999999999999999999986542
Q ss_pred ------------------------ccchhccchhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhc
Q 006442 489 ------------------------LPNYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLD 538 (645)
Q Consensus 489 ------------------------~~~~~~q~~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~ 538 (645)
..+|++|+....+ +..|+.+|+.+.... ....++.++++.+|+..+..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l-~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~ 160 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQL-FEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ 160 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCccccc-ccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 1246666543333 457999999865321 113457889999999646789
Q ss_pred cCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeC
Q 006442 539 RKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKG 615 (645)
Q Consensus 539 ~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~ 615 (645)
+++.+|||||||||+|||||+.+|++|||||||++||+.++..+.+.|++. +.|||+||||++++.++||||++|++
T Consensus 161 ~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~ 240 (305)
T PRK13651 161 RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKD 240 (305)
T ss_pred CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999998764 56999999999999999999999999
Q ss_pred CeEEeeCCChhHHH
Q 006442 616 SNLQDYAGDYNQVQ 629 (645)
Q Consensus 616 g~i~~~~~~~~~~~ 629 (645)
|+++. .|..++++
T Consensus 241 G~i~~-~g~~~~~~ 253 (305)
T PRK13651 241 GKIIK-DGDTYDIL 253 (305)
T ss_pred CEEEE-ECCHHHHh
Confidence 99985 46665554
No 233
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-40 Score=344.03 Aligned_cols=207 Identities=24% Similarity=0.372 Sum_probs=173.6
Q ss_pred ccEEEEeEEEEeCC--eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceE
Q 006442 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (645)
Q Consensus 96 ~~i~i~nls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i 163 (645)
++|+++|++++|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..|
T Consensus 4 ~~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 4 EIIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred ceEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 36999999999974 469999999999999999999999999999999999999999999998743 259
Q ss_pred EEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
+|++|++. .++..||.||+...... ......+..+++.++
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~---------------------------------------~~~~~~~~~~~~~~~ 124 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLEN---------------------------------------IGVPREEMVERVDQA 124 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhh---------------------------------------CCCCHHHHHHHHHHH
Confidence 99999984 55678999998532100 001112223456778
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~ 318 (645)
+..+|+. +..++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .|.|||++||++++
T Consensus 125 l~~~gL~-~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~ 203 (279)
T PRK13635 125 LRQVGME-DFLNREPHRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDE 203 (279)
T ss_pred HHHcCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH
Confidence 8888986 678889999999999999999999999999999999999999999999988752 38999999999999
Q ss_pred HHhhcCeEEEEcCceeEEeccChHHH
Q 006442 319 LDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+.. ||+|+++++|++ .+.|+..+.
T Consensus 204 ~~~-~d~i~~l~~G~i-~~~g~~~~~ 227 (279)
T PRK13635 204 AAQ-ADRVIVMNKGEI-LEEGTPEEI 227 (279)
T ss_pred HHc-CCEEEEEECCEE-EEECCHHHH
Confidence 975 999999999987 456765544
No 234
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=338.41 Aligned_cols=208 Identities=20% Similarity=0.326 Sum_probs=169.5
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC--C---CccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE--P---DSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~--p---~~G~I~~~~~~----------- 160 (645)
.|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ | ++|+|.++|..
T Consensus 4 ~l~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~ 83 (252)
T PRK14256 4 KVKLEQLNVHFGKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSI 83 (252)
T ss_pred EEEEEEEEEEeCCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHh
Confidence 5899999999988889999999999999999999999999999999999986 4 68999987632
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..++|++|++.+++..|+.||+...+... . ..+....++++
T Consensus 84 ~~~i~~~~q~~~~~~~~tv~enl~~~~~~~--------------~------------------------~~~~~~~~~~~ 125 (252)
T PRK14256 84 RRRVGMVFQKPNPFPAMSIYDNVIAGYKLN--------------G------------------------RVNRSEADEIV 125 (252)
T ss_pred hccEEEEecCCCCCCcCcHHHHHHhHHHhc--------------C------------------------CCCHHHHHHHH
Confidence 24999999998877889999985321100 0 00001122345
Q ss_pred HhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006442 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (645)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (645)
.++++.+|+.. +..++.+.+||||||||++|||||+.+|++|||||||++||+.++.++.++|++ .+.|||++||
T Consensus 126 ~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH 205 (252)
T PRK14256 126 ESSLKRVALWDEVKDRLKSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTH 205 (252)
T ss_pred HHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEEC
Confidence 56666777642 245677899999999999999999999999999999999999999999887753 3689999999
Q ss_pred CHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+++++..+||+++++++|++. ..|...+
T Consensus 206 ~~~~~~~~~d~i~~l~~G~i~-~~~~~~~ 233 (252)
T PRK14256 206 NMQQAARVSDYTAFFYMGDLV-ECGETKK 233 (252)
T ss_pred CHHHHHhhCCEEEEEECCEEE-EeCCHHH
Confidence 999999999999999999974 4455443
No 235
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-40 Score=349.83 Aligned_cols=208 Identities=24% Similarity=0.347 Sum_probs=171.8
Q ss_pred cEEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC----CCccEEEEcCCCc-------
Q 006442 97 GVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE----PDSGNVIKAKSNM------- 161 (645)
Q Consensus 97 ~i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~----p~~G~I~~~~~~~------- 161 (645)
.|+++|+++.|+. ..+|+||||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 5899999999976 469999999999999999999999999999999999997 4899999987531
Q ss_pred -------eEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCCh
Q 006442 162 -------KIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (645)
Q Consensus 162 -------~i~~v~Q~~~--~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (645)
.|+|++|++. +.+.+|+.+++...+.. ......
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~--------------------------------------~~~~~~ 124 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKV--------------------------------------HQGGNK 124 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHH--------------------------------------hcCCCH
Confidence 4999999984 56678888876422110 000111
Q ss_pred hcHHHHHHhhchhcCCCc--ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCC
Q 006442 233 DTLDAKVSKLMPELGFTA--DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQD 306 (645)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~--~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g 306 (645)
.+..+++.++++.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|+ +.|
T Consensus 125 ~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g 204 (326)
T PRK11022 125 KTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKEN 204 (326)
T ss_pred HHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcC
Confidence 223456778889999963 35678899999999999999999999999999999999999999999988764 258
Q ss_pred CeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 307 VPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 307 ~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
.|+|+||||++.+.++||+|++|.+|++. ..|+..+
T Consensus 205 ~til~iTHdl~~~~~~adri~vm~~G~iv-e~g~~~~ 240 (326)
T PRK11022 205 MALVLITHDLALVAEAAHKIIVMYAGQVV-ETGKAHD 240 (326)
T ss_pred CEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHH
Confidence 99999999999999999999999999984 4455443
No 236
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-40 Score=342.54 Aligned_cols=207 Identities=24% Similarity=0.366 Sum_probs=172.1
Q ss_pred cEEEEeEEEEeCC-eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------------ceE
Q 006442 97 GVKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKI 163 (645)
Q Consensus 97 ~i~i~nls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------~~i 163 (645)
+|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.. ..|
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 1 ILETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred CEEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 3789999999964 569999999999999999999999999999999999999999999998743 248
Q ss_pred EEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
+|++|++. .++..||.||+...... . .........++.++
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~--------------~-------------------------~~~~~~~~~~~~~~ 121 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLN--------------L-------------------------GLSKEEVEKRVKEA 121 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHH--------------c-------------------------CCCHHHHHHHHHHH
Confidence 99999973 33457999998521100 0 00111223456677
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFL 319 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l 319 (645)
++.+|+. +..++++.+|||||+||++|||||+.+|++|||||||+|||+.++.++.++|++ .|.|||++|||++++
T Consensus 122 l~~~~L~-~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~ 200 (275)
T PRK13639 122 LKAVGME-GFENKPPHHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLV 200 (275)
T ss_pred HHHCCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHH
Confidence 8888986 577899999999999999999999999999999999999999999999888753 489999999999999
Q ss_pred HhhcCeEEEEcCceeEEeccChHHH
Q 006442 320 DQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 320 ~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
.++||+++++++|++. ..|+.+++
T Consensus 201 ~~~~d~i~~l~~G~i~-~~g~~~~~ 224 (275)
T PRK13639 201 PVYADKVYVMSDGKII-KEGTPKEV 224 (275)
T ss_pred HHhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999874 45665544
No 237
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.5e-40 Score=336.86 Aligned_cols=202 Identities=29% Similarity=0.449 Sum_probs=175.0
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------cch
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNY 492 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~~ 492 (645)
+|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 2 ~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 81 (242)
T TIGR03411 2 ILYLEGLSVSFDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIGR 81 (242)
T ss_pred eEEEEeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCeeE
Confidence 689999999998888999999999999999999999999999999999999999999999997652 123
Q ss_pred hccchhhcCCCCCCHHHHHHhhhcc--------------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHH
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAED--------------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~~--------------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral 558 (645)
.+|. ..+.+..|+.+|+...... .....+..+++.+++. +..++++..|||||||||+|||||
T Consensus 82 ~~q~--~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Ge~qrv~laral 158 (242)
T TIGR03411 82 KFQK--PTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLA-DEADRLAGLLSHGQKQWLEIGMLL 158 (242)
T ss_pred eccc--cccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHH
Confidence 3433 3466678999999764210 0123577889999995 667899999999999999999999
Q ss_pred ccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|++.. .++.+++.
T Consensus 159 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~-~~~~~~~~ 230 (242)
T TIGR03411 159 MQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLA-EGSLDQVQ 230 (242)
T ss_pred hcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEe-eCCHHHHh
Confidence 9999999999999999999999999999876 3599999999999999999999999999985 56777664
No 238
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=348.99 Aligned_cols=207 Identities=24% Similarity=0.410 Sum_probs=177.3
Q ss_pred CcEEEEEeeeeeeCC----------eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--
Q 006442 422 RSVVTIKNLEFGYED----------RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-- 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~----------~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-- 489 (645)
+++|+++|+++.|+. ..+|++|||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 ~~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~ 82 (327)
T PRK11308 3 QPLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKA 82 (327)
T ss_pred CceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcC
Confidence 457999999999962 46899999999999999999999999999999999999999999999998752
Q ss_pred -----------cchhccchhhcCCCCCCHHHHHHhhhc---c----ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHH
Q 006442 490 -----------PNYFEQNQAEALDLDKTVLETVAEAAE---D----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKAR 551 (645)
Q Consensus 490 -----------~~~~~q~~~~~l~~~~tv~e~v~~~~~---~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqr 551 (645)
.+|++|+....+++.+++.+++..... . ...+.+.++|+.+|+.....++++++||||||||
T Consensus 83 ~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QR 162 (327)
T PRK11308 83 DPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQR 162 (327)
T ss_pred CHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHH
Confidence 245666654467788899988864321 1 1124578899999996556799999999999999
Q ss_pred HHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhH
Q 006442 552 LAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQ 627 (645)
Q Consensus 552 v~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~ 627 (645)
|+|||||+.+|++||+||||++||..++..+.++|.+. +.|||+||||+..+.++||||++|++|++++. |+.++
T Consensus 163 v~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~-g~~~~ 241 (327)
T PRK11308 163 IAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEK-GTKEQ 241 (327)
T ss_pred HHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE-CCHHH
Confidence 99999999999999999999999999999999988754 56999999999999999999999999999864 55555
Q ss_pred HH
Q 006442 628 VQ 629 (645)
Q Consensus 628 ~~ 629 (645)
++
T Consensus 242 ~~ 243 (327)
T PRK11308 242 IF 243 (327)
T ss_pred Hh
Confidence 44
No 239
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=344.97 Aligned_cols=204 Identities=23% Similarity=0.382 Sum_probs=172.6
Q ss_pred EEEEEeeeeeeCC-----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------
Q 006442 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~-----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (645)
+|+++|+++.|++ +.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 4889999999973 46999999999999999999999999999999999999999999999998652
Q ss_pred -----cchhccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHH
Q 006442 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (645)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral 558 (645)
.+|++|+....+ +..|+.+|+...... . ....+.++++.+++..+..++++.+|||||||||+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~laral 160 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQL-FENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVM 160 (287)
T ss_pred HHHhceEEEEeChhhhh-ccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHHH
Confidence 134455432123 357999999754321 1 1234678899999954577999999999999999999999
Q ss_pred ccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++. .|..+++.
T Consensus 161 ~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~ 233 (287)
T PRK13641 161 AYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIK-HASPKEIF 233 (287)
T ss_pred HcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 9999999999999999999999999999865 3599999999999999999999999999985 46655543
No 240
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.3e-41 Score=325.84 Aligned_cols=205 Identities=24% Similarity=0.476 Sum_probs=182.3
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCc------eEEEEeccC
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM------KIAFLSQEF 170 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~------~i~~v~Q~~ 170 (645)
++++++|+++|++..+++|+||+|++|++.|++|+|||||||.+|+|+|+++|++|+|.|+|... +|||+|.+-
T Consensus 2 ~L~ie~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~~~~~rIGyLPEER 81 (300)
T COG4152 2 ALEIEGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQEIKNRIGYLPEER 81 (300)
T ss_pred ceEEecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhhhhhhhcccChhhh
Confidence 48999999999999999999999999999999999999999999999999999999999998543 699999999
Q ss_pred ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCc
Q 006442 171 EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTA 250 (645)
Q Consensus 171 ~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~ 250 (645)
.+++.+||.|.+.. |. ....++..++.+++..+|+.+++.
T Consensus 82 GLy~k~tv~dql~y-la--------------------------------------~LkGm~~~e~~~~~~~wLer~~i~- 121 (300)
T COG4152 82 GLYPKMTVEDQLKY-LA--------------------------------------ELKGMPKAEIQKKLQAWLERLEIV- 121 (300)
T ss_pred ccCccCcHHHHHHH-HH--------------------------------------HhcCCcHHHHHHHHHHHHHhcccc-
Confidence 99999999998742 10 112345556777888889999986
Q ss_pred ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH---ccCCCeEEEEecCHHHHHhhcCeEE
Q 006442 251 DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPMVIISHDRAFLDQLCTKIV 327 (645)
Q Consensus 251 ~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L---~~~g~tvIivsHd~~~l~~~~d~i~ 327 (645)
....+++.+||-|++|++.+..+++++|+++|||||||||||.+.+.|.+.+ ++.|.|||++||.++.+.++||+++
T Consensus 122 ~~~~~kIk~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~ll 201 (300)
T COG4152 122 GKKTKKIKELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLL 201 (300)
T ss_pred ccccchHHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhh
Confidence 5677789999999999999999999999999999999999999999998864 6789999999999999999999999
Q ss_pred EEcCceeEEeccChH
Q 006442 328 ETEMGVSRTYEGNYS 342 (645)
Q Consensus 328 ~l~~G~~~~~~g~~~ 342 (645)
.++.|+. +..|+..
T Consensus 202 mL~kG~~-V~~G~v~ 215 (300)
T COG4152 202 MLKKGQT-VLYGTVE 215 (300)
T ss_pred eecCCce-EEeccHH
Confidence 9999987 4567643
No 241
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-40 Score=355.13 Aligned_cols=205 Identities=27% Similarity=0.457 Sum_probs=178.6
Q ss_pred CCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cch
Q 006442 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNY 492 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~ 492 (645)
..++|+++|+++.|+++.+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|.++. .+|
T Consensus 16 ~~~~l~l~~v~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~ 95 (377)
T PRK11607 16 LTPLLEIRNLTKSFDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINM 95 (377)
T ss_pred CCceEEEEeEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 456799999999998888999999999999999999999999999999999999999999999998752 246
Q ss_pred hccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEE
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 566 (645)
++|+ ..+++.+|+.+|+.+.... . ..+++.++++.+++. +..++++.+|||||||||+|||||+.+|++||
T Consensus 96 vfQ~--~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~~~LSgGq~QRVaLARAL~~~P~lLL 172 (377)
T PRK11607 96 MFQS--YALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQ-EFAKRKPHQLSGGQRQRVALARSLAKRPKLLL 172 (377)
T ss_pred EeCC--CccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 6655 4678899999999876431 1 124577899999994 67899999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHH----hcCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 567 LDEPTNHLDIPSKEMLEEAIS----EYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 567 LDEPt~~LD~~s~~~l~~~l~----~~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||||++||..++..|.+.|. +.+.|+|+||||++++..+|||+++|++|++... |..+++.
T Consensus 173 LDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~-g~~~~~~ 238 (377)
T PRK11607 173 LDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQI-GEPEEIY 238 (377)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEE-cCHHHHH
Confidence 999999999999988886654 3467999999999999999999999999999864 6655544
No 242
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2e-40 Score=333.19 Aligned_cols=195 Identities=26% Similarity=0.413 Sum_probs=168.6
Q ss_pred EEEEEeeeeee-CCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-------------
Q 006442 424 VVTIKNLEFGY-EDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y-~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------- 489 (645)
+|+++|+++.| +++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 1 MIRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred CEEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 47899999999 6678999999999999999999999999999999999999999999999997652
Q ss_pred cchhccchhhcCCCCCCHHHHHHhhhc--ccc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCC
Q 006442 490 PNYFEQNQAEALDLDKTVLETVAEAAE--DWR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (645)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~v~~~~~--~~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 563 (645)
.+|++|+ ..+.+..|+.+|+..... ... ...+..+++.+++. +..++++.+||||||||++|||||+.+|+
T Consensus 81 i~~~~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~ 157 (222)
T PRK10908 81 IGMIFQD--HHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLL-DKAKNFPIQLSGGEQQRVGIARAVVNKPA 157 (222)
T ss_pred eEEEecC--ccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCCchhCCHHHHHHHHHHHHHHcCCC
Confidence 1244443 345567899999976421 111 23467889999995 56789999999999999999999999999
Q ss_pred eEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEee
Q 006442 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDY 621 (645)
Q Consensus 564 lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~ 621 (645)
+|||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|+++.-
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~ 218 (222)
T PRK10908 158 VLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHGG 218 (222)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEccC
Confidence 99999999999999999999998865 46999999999999999999999999998753
No 243
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=335.60 Aligned_cols=206 Identities=24% Similarity=0.368 Sum_probs=172.2
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEec
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQ 168 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~Q 168 (645)
+|+++|++++|++.. .++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 1 ~l~~~~l~~~~~~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 78 (232)
T PRK10771 1 MLKLTDITWLYHHLP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQ 78 (232)
T ss_pred CeEEEEEEEEECCcc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEec
Confidence 378999999998644 38999999999999999999999999999999999999999998753 35999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++..|+.||+...+... .. .....+.++.++++.+|+
T Consensus 79 ~~~~~~~~tv~e~l~~~~~~~-------------~~--------------------------~~~~~~~~~~~~l~~~~l 119 (232)
T PRK10771 79 ENNLFSHLTVAQNIGLGLNPG-------------LK--------------------------LNAAQREKLHAIARQMGI 119 (232)
T ss_pred ccccccCCcHHHHHhcccccc-------------cC--------------------------CCHHHHHHHHHHHHHcCc
Confidence 998877889999985321100 00 000113456677888898
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcC
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d 324 (645)
. +..++++.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|||++|||++++..+||
T Consensus 120 ~-~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d 198 (232)
T PRK10771 120 E-DLLARLPGQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAP 198 (232)
T ss_pred H-HHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCC
Confidence 6 578899999999999999999999999999999999999999999998887642 48899999999999999999
Q ss_pred eEEEEcCceeEEeccChHHHH
Q 006442 325 KIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 325 ~i~~l~~G~~~~~~g~~~~~~ 345 (645)
+++++++|++. +.|+.+++.
T Consensus 199 ~i~~l~~g~i~-~~g~~~~~~ 218 (232)
T PRK10771 199 RSLVVADGRIA-WDGPTDELL 218 (232)
T ss_pred EEEEEECCEEE-EeCCHHHHH
Confidence 99999999984 567765543
No 244
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.1e-40 Score=335.23 Aligned_cols=201 Identities=26% Similarity=0.420 Sum_probs=172.5
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------cchh
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNYF 493 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~~~ 493 (645)
|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (232)
T cd03218 1 LRAENLSKRYGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGYL 80 (232)
T ss_pred CeEEEEEEEeCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEEe
Confidence 47899999999888999999999999999999999999999999999999999999999997642 1244
Q ss_pred ccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEe
Q 006442 494 EQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 567 (645)
+|. ..+.+..|+.+|+...... . ....+.++++.+++. +..++.+.+|||||||||+|||||+.+|++|||
T Consensus 81 ~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llll 157 (232)
T cd03218 81 PQE--ASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHIT-HLRKSKASSLSGGERRRVEIARALATNPKFLLL 157 (232)
T ss_pred cCC--ccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 443 3455668999999764321 1 123467889999995 677899999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 568 DEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 568 DEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||++||+.+++.+.+.|++. +.|||++|||++.+.++||++++|++|++.. .++.+++.
T Consensus 158 DEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 221 (232)
T cd03218 158 DEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLA-EGTPEEIA 221 (232)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEE-EeCHHHhh
Confidence 9999999999999999998764 4599999999999999999999999999984 46666654
No 245
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=8.3e-41 Score=310.51 Aligned_cols=201 Identities=29% Similarity=0.462 Sum_probs=174.6
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceeccc--------chhcc
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP--------NYFEQ 495 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~--------~~~~q 495 (645)
+|.+++|.+.|+..+ =.++++|+.||++||+||+||||||||++|+|+..|.+|+|+++|.+... ..++
T Consensus 1 ~l~L~~V~~~y~~~~--~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlF- 77 (231)
T COG3840 1 MLALDDVRFSYGHLP--MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLF- 77 (231)
T ss_pred CccccceEEeeCcce--EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhh-
Confidence 367889999997544 35789999999999999999999999999999999999999999987621 1233
Q ss_pred chhhcCCCCCCHHHHHHhhhc------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeC
Q 006442 496 NQAEALDLDKTVLETVAEAAE------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~~------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 569 (645)
|+.+++..+||.+|+..+.. ....+.+..++.++|+ .+..++.|.+|||||||||+|||+|+++-+||+|||
T Consensus 78 -QEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl-~~~~~RLP~~LSGGqRQRvALARclvR~~PilLLDE 155 (231)
T COG3840 78 -QENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGL-AGFLKRLPGELSGGQRQRVALARCLVREQPILLLDE 155 (231)
T ss_pred -hccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhCh-hhHhhhCccccCchHHHHHHHHHHHhccCCeEEecC
Confidence 45688999999999987643 2234568889999999 578899999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 570 Pt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|+++|||.-+..|..++.+. +.|++||||.++.+..++++++++++|+|. +.|+.+++++
T Consensus 156 PFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~-~~g~~~~~~~ 219 (231)
T COG3840 156 PFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIA-AQGSTQELLS 219 (231)
T ss_pred chhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEE-eeccHHHHhc
Confidence 99999999999999888754 459999999999999999999999999998 5688777653
No 246
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-40 Score=345.19 Aligned_cols=205 Identities=25% Similarity=0.369 Sum_probs=174.4
Q ss_pred EEEEEeeeeeeCC-----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------
Q 006442 424 VVTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~-----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (645)
.|+++|+++.|++ +++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 3899999999963 36999999999999999999999999999999999999999999999998752
Q ss_pred -----cchhccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHH
Q 006442 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (645)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral 558 (645)
.+|++|+....+ +..|+.+|+.+.... . ....+.++++.+|+..+..++++.+|||||||||+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~l-~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL 160 (286)
T PRK13646 82 PVRKRIGMVFQFPESQL-FEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSIL 160 (286)
T ss_pred HHHhheEEEecChHhcc-chhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 245566533233 346999999865321 1 1245678899999964667899999999999999999999
Q ss_pred ccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++.++|||+++|++|+++. .|+.+++++
T Consensus 161 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~-~g~~~~~~~ 235 (286)
T PRK13646 161 AMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVS-QTSPKELFK 235 (286)
T ss_pred HhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-ECCHHHHHh
Confidence 9999999999999999999999999999864 4699999999999999999999999999985 466666543
No 247
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-40 Score=340.94 Aligned_cols=205 Identities=29% Similarity=0.404 Sum_probs=176.1
Q ss_pred CCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------c
Q 006442 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~ 490 (645)
++++|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 8 ~~~~l~i~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 8 SDTTFALRNVSFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred CCceEEEeeEEEEECCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 456899999999998888999999999999999999999999999999999999999999999997652 2
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhc----------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHcc
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAE----------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~----------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~ 560 (645)
+|++|. ..+.+..|+.+|+..... ......+..+++.+++. +..++++.+|||||||||+|||||+.
T Consensus 88 ~~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~ 164 (265)
T PRK10575 88 AYLPQQ--LPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLK-PLAHRLVDSLSGGERQRAWIAMLVAQ 164 (265)
T ss_pred EEeccC--CCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCH-HHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 344543 245567899999975421 01123577899999994 67799999999999999999999999
Q ss_pred CCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 561 ~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+|+||||||||++||+.+++.+.+.|.++ +.|||+||||++++.++||++++|++|+++. .+..+++.
T Consensus 165 ~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~-~~~~~~~~ 236 (265)
T PRK10575 165 DSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIA-QGTPAELM 236 (265)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEE-ecCHHHhc
Confidence 99999999999999999999999988754 4699999999999999999999999999975 46666554
No 248
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.1e-40 Score=332.51 Aligned_cols=198 Identities=26% Similarity=0.386 Sum_probs=170.8
Q ss_pred EEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------cchh
Q 006442 425 VTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYF 493 (645)
Q Consensus 425 i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~ 493 (645)
|+++|+++.|++ +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 578999999986 78999999999999999999999999999999999999999999999998752 2344
Q ss_pred ccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEe
Q 006442 494 EQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 567 (645)
.|+ ..+.+..|+.+|+...... . ....+.++++.+++. +..++++.+|||||||||+|||||+.+|++|||
T Consensus 81 ~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llll 157 (220)
T cd03263 81 PQF--DALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLT-DKANKRARTLSGGMKRKLSLAIALIGGPSVLLL 157 (220)
T ss_pred cCc--CCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 544 3455678999998764211 1 123567889999994 667899999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChh
Q 006442 568 DEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (645)
Q Consensus 568 DEPt~~LD~~s~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~ 626 (645)
||||++||+.+++.+.+.|+++. .|||++|||++++.++||++++|++|++.. .++.+
T Consensus 158 DEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~-~~~~~ 217 (220)
T cd03263 158 DEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRC-IGSPQ 217 (220)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEe-cCCHH
Confidence 99999999999999999998753 599999999999999999999999999985 35544
No 249
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.5e-40 Score=334.76 Aligned_cols=192 Identities=21% Similarity=0.339 Sum_probs=162.7
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEE
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~ 165 (645)
++|+++|+++.|+++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+++.. ..++|
T Consensus 6 ~~i~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 85 (225)
T PRK10247 6 PLLQLQNVGYLAGDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVSY 85 (225)
T ss_pred ceEEEeccEEeeCCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccEE
Confidence 46999999999988889999999999999999999999999999999999999999999998742 35999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.+++ .|++||+..... +. .....+.++.++++.
T Consensus 86 ~~q~~~l~~-~tv~enl~~~~~---------------~~--------------------------~~~~~~~~~~~~l~~ 123 (225)
T PRK10247 86 CAQTPTLFG-DTVYDNLIFPWQ---------------IR--------------------------NQQPDPAIFLDDLER 123 (225)
T ss_pred Eeccccccc-ccHHHHHHhHHh---------------hc--------------------------CCChHHHHHHHHHHH
Confidence 999988765 599999852100 00 000012345567888
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHh
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~ 321 (645)
+|+.....++++.+|||||+|||+|||||+.+|++|||||||++||+.+++.+.++|++ .|.|||++||+++++.
T Consensus 124 ~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~- 202 (225)
T PRK10247 124 FALPDTILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN- 202 (225)
T ss_pred cCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-
Confidence 88854567889999999999999999999999999999999999999999999887743 4889999999999996
Q ss_pred hcCeEEEEc
Q 006442 322 LCTKIVETE 330 (645)
Q Consensus 322 ~~d~i~~l~ 330 (645)
.||++++++
T Consensus 203 ~~d~i~~l~ 211 (225)
T PRK10247 203 HADKVITLQ 211 (225)
T ss_pred hCCEEEEEe
Confidence 599999996
No 250
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=338.40 Aligned_cols=204 Identities=27% Similarity=0.429 Sum_probs=174.8
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceeccc-----------
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP----------- 490 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~----------- 490 (645)
+.+|+++|+++.|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++..
T Consensus 3 ~~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 3 QPLLSVSGLMMRFGGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred CceEEEeeEEEEECCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 347999999999998899999999999999999999999999999999999999999999999986521
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhc------------------cc---cHHHHHHHHhhcCCChhhhccCcCcCCHhHH
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAE------------------DW---RIDDIKGLLGRCNFKADMLDRKVSLLSGGEK 549 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~------------------~~---~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqk 549 (645)
.|++|+ ..+.+..|+.+|+..... .. ....+..+++.+|+ .+..++++.+||||||
T Consensus 83 ~~~~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl-~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 83 VRTFQH--VRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGL-LEHANRQAGNLAYGQQ 159 (255)
T ss_pred EEeccC--cccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCCh-hhhhhCChhhCCHHHH
Confidence 223443 456677899999886421 00 11346778899999 4678999999999999
Q ss_pred HHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCCh
Q 006442 550 ARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDY 625 (645)
Q Consensus 550 qrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~ 625 (645)
|||+|||||+.+|++|||||||++||+.++..+.+.|.++ +.|||++|||++++.++||++++|++|++.. .++.
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~-~~~~ 238 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLA-NGTP 238 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEe-cCCH
Confidence 9999999999999999999999999999999999998754 4699999999999999999999999999985 4666
Q ss_pred hHHH
Q 006442 626 NQVQ 629 (645)
Q Consensus 626 ~~~~ 629 (645)
+++.
T Consensus 239 ~~~~ 242 (255)
T PRK11300 239 EEIR 242 (255)
T ss_pred HHHh
Confidence 6654
No 251
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.8e-41 Score=369.01 Aligned_cols=210 Identities=25% Similarity=0.454 Sum_probs=177.2
Q ss_pred CCcEEEEEeeeeeeCCe---eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---cchhc
Q 006442 421 GRSVVTIKNLEFGYEDR---LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---PNYFE 494 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~---~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---~~~~~ 494 (645)
-++.|+++||+|.|+.+ ++|+|+||+|+|||++|||||||+||||+.++|.++++|++|+|.+||++++ +.|++
T Consensus 462 ~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr 541 (716)
T KOG0058|consen 462 LQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLR 541 (716)
T ss_pred ccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHH
Confidence 45679999999999865 5999999999999999999999999999999999999999999999999873 23333
Q ss_pred cc----hhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCC------h----hhhccCcCcCCHhHHHHHHHHHHHcc
Q 006442 495 QN----QAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFK------A----DMLDRKVSLLSGGEKARLAFCKFMVK 560 (645)
Q Consensus 495 q~----~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~------~----~~~~~~~~~LSgGqkqrv~lAral~~ 560 (645)
++ .++...+..|+.|||.++......+++....++.+-. + .....+..+||||||||+||||||++
T Consensus 542 ~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIARALlr 621 (716)
T KOG0058|consen 542 RKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIARALLR 621 (716)
T ss_pred HHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHHHHHhc
Confidence 22 1223457899999999988766666666555554321 1 12334556999999999999999999
Q ss_pred CCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHHH
Q 006442 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSLW 632 (645)
Q Consensus 561 ~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~~ 632 (645)
+|.||||||+||+||.+++..++++|.+. +.|||+|+|++.+|+. +|+|+++++|++.+ .|.++++++..
T Consensus 622 ~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~-Ad~Ivvi~~G~V~E-~G~h~eLl~~~ 693 (716)
T KOG0058|consen 622 NPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRH-ADQIVVIDKGRVVE-MGTHDELLSKP 693 (716)
T ss_pred CCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhh-ccEEEEEcCCeEEe-cccHHHHhhCc
Confidence 99999999999999999999999999864 4699999999999987 99999999999986 68888888765
No 252
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-40 Score=333.74 Aligned_cols=205 Identities=27% Similarity=0.432 Sum_probs=173.4
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEecc
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (645)
|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 l~~~~l~~~~~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 80 (232)
T cd03300 1 IELENVSKFYGGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQN 80 (232)
T ss_pred CEEEeEEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEecc
Confidence 478999999998889999999999999999999999999999999999999999999997642 369999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCC
Q 006442 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (645)
Q Consensus 170 ~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (645)
+.++...|+.+|+...+... .......++++.++++.+|+.
T Consensus 81 ~~~~~~~t~~~nl~~~~~~~---------------------------------------~~~~~~~~~~~~~~l~~~~l~ 121 (232)
T cd03300 81 YALFPHLTVFENIAFGLRLK---------------------------------------KLPKAEIKERVAEALDLVQLE 121 (232)
T ss_pred cccCCCCcHHHHHHHHHHhc---------------------------------------CCCHHHHHHHHHHHHHHcCCc
Confidence 98877789999975321100 001112234556778888886
Q ss_pred cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 006442 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (645)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ 325 (645)
+..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .|+|||++||+++++.++||+
T Consensus 122 -~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~ 200 (232)
T cd03300 122 -GYANRKPSQLSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDR 200 (232)
T ss_pred -hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCE
Confidence 677888999999999999999999999999999999999999999999987743 389999999999999999999
Q ss_pred EEEEcCceeEEeccChHH
Q 006442 326 IVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 326 i~~l~~G~~~~~~g~~~~ 343 (645)
++++++|++. +.|...+
T Consensus 201 i~~l~~G~~~-~~~~~~~ 217 (232)
T cd03300 201 IAVMNKGKIQ-QIGTPEE 217 (232)
T ss_pred EEEEECCEEE-ecCCHHH
Confidence 9999999984 4455443
No 253
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.4e-40 Score=339.11 Aligned_cols=206 Identities=23% Similarity=0.342 Sum_probs=174.2
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECcee-----cc--------
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHN-----VL-------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~-----~~-------- 489 (645)
.+|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ +.
T Consensus 5 ~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~~ 84 (258)
T PRK11701 5 PLLSVRGLTKLYGPRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAERR 84 (258)
T ss_pred ceEEEeeeEEEcCCceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHHH
Confidence 47999999999988889999999999999999999999999999999999999999999999976 32
Q ss_pred ------cchhccchhhcCCCCCCHHHHHHhhh---cc----ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHH
Q 006442 490 ------PNYFEQNQAEALDLDKTVLETVAEAA---ED----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCK 556 (645)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~v~~~~---~~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAr 556 (645)
.+|++|+....+.+..++.+|+.... .. .....+.++++.+++..+..++++.+|||||||||+|||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl~lar 164 (258)
T PRK11701 85 RLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPTTFSGGMQQRLQIAR 164 (258)
T ss_pred HHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHHHHHH
Confidence 23555554334556678888876421 10 112356788999999544678999999999999999999
Q ss_pred HHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|+++. .|..+++.
T Consensus 165 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~-~~~~~~~~ 240 (258)
T PRK11701 165 NLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVE-SGLTDQVL 240 (258)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999999999988753 5699999999999999999999999999985 46666554
No 254
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.3e-40 Score=331.82 Aligned_cols=198 Identities=31% Similarity=0.461 Sum_probs=169.8
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------ceEEEEeccCc
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------MKIAFLSQEFE 171 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------~~i~~v~Q~~~ 171 (645)
|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++.. ..++|++|++.
T Consensus 1 l~l~~v~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q~~~ 80 (223)
T TIGR03740 1 LETKNLSKRFGKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIESPP 80 (223)
T ss_pred CEEEeEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcCCCC
Confidence 478999999998889999999999999999999999999999999999999999999998642 36999999998
Q ss_pred cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcc
Q 006442 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (645)
Q Consensus 172 ~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (645)
+++..|+++|+..... +. .. .+.++.++++.+|+. +
T Consensus 81 ~~~~~t~~~~~~~~~~---------------~~------------------------~~----~~~~~~~~l~~~~l~-~ 116 (223)
T TIGR03740 81 LYENLTARENLKVHTT---------------LL------------------------GL----PDSRIDEVLNIVDLT-N 116 (223)
T ss_pred ccccCCHHHHHHHHHH---------------Hc------------------------CC----CHHHHHHHHHHcCCc-H
Confidence 8778899999752110 00 00 013455677888886 5
Q ss_pred cccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEE
Q 006442 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVE 328 (645)
Q Consensus 252 ~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~i~~ 328 (645)
..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|+ +.|.|||++|||++++..+||++++
T Consensus 117 ~~~~~~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~ 196 (223)
T TIGR03740 117 TGKKKAKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGI 196 (223)
T ss_pred HHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEE
Confidence 6788899999999999999999999999999999999999999999988874 3578999999999999999999999
Q ss_pred EcCceeEEeccC
Q 006442 329 TEMGVSRTYEGN 340 (645)
Q Consensus 329 l~~G~~~~~~g~ 340 (645)
+++|++. ..|.
T Consensus 197 l~~g~i~-~~~~ 207 (223)
T TIGR03740 197 ISEGVLG-YQGK 207 (223)
T ss_pred EeCCEEE-EecC
Confidence 9999974 3444
No 255
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-40 Score=340.36 Aligned_cols=209 Identities=21% Similarity=0.288 Sum_probs=167.6
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC---------
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~--------- 160 (645)
.++|+++|++++|++..+|+++||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|..
T Consensus 19 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 19 EHILEVKDLSIYYGEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred CceEEEEEEEEEeCCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 346999999999998889999999999999999999999999999999999864 789999987632
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..++|++|++.+++ .|++||+...+... . . ......+.
T Consensus 99 ~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---------------~--~---------------------~~~~~~~~ 139 (268)
T PRK14248 99 NLRREIGMVFQKPNPFP-KSIYNNITHALKYA---------------G--E---------------------RRKSVLDE 139 (268)
T ss_pred HHhccEEEEecCCccCc-ccHHHHHHHHHHhc---------------C--C---------------------CcHHHHHH
Confidence 25999999988765 59999986321100 0 0 00001122
Q ss_pred HHHhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006442 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (645)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (645)
.+.+++..+++.. ...++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||++
T Consensus 140 ~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~ 219 (268)
T PRK14248 140 IVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIV 219 (268)
T ss_pred HHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 3344455555531 345778999999999999999999999999999999999999999999988753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
|||++++..+||+++++++|++. +.|..++
T Consensus 220 tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~ 249 (268)
T PRK14248 220 THNMQQALRVSDRTAFFLNGDLV-EYDQTEQ 249 (268)
T ss_pred EeCHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 99999999999999999999984 4465443
No 256
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-40 Score=341.32 Aligned_cols=202 Identities=28% Similarity=0.397 Sum_probs=173.5
Q ss_pred EEEEEeeeeeeC-CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cch
Q 006442 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (645)
Q Consensus 424 ~i~~~~v~~~y~-~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (645)
+|+++|+++.|+ ++.+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 83 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGL 83 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEE
Confidence 699999999996 567999999999999999999999999999999999999999999999998752 245
Q ss_pred hccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEE
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 566 (645)
++|+.. ...+..|+.+|+.+.... . ...++..+++.+++. +..++++.+|||||||||+|||||+.+|++||
T Consensus 84 v~q~~~-~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~~qrv~laraL~~~p~lll 161 (274)
T PRK13647 84 VFQDPD-DQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMW-DFRDKPPYHLSYGQKKRVAIAGVLAMDPDVIV 161 (274)
T ss_pred EecChh-hhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCH-HHhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 566532 223467999999864321 1 124577889999994 67899999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHH
Q 006442 567 LDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQV 628 (645)
Q Consensus 567 LDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~ 628 (645)
|||||++||+.++..+.+.|+++ +.|||+||||++++.++|||+++|++|+++.. |+.+.+
T Consensus 162 lDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~-g~~~~~ 225 (274)
T PRK13647 162 LDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAE-GDKSLL 225 (274)
T ss_pred EECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE-CCHHHh
Confidence 99999999999999999999865 46999999999999999999999999999854 555543
No 257
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.8e-40 Score=331.61 Aligned_cols=193 Identities=23% Similarity=0.316 Sum_probs=165.6
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCc-------eEEEEec
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-------KIAFLSQ 168 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~-------~i~~v~Q 168 (645)
++|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|... .++|++|
T Consensus 10 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~~~~~~i~~~~q 89 (214)
T PRK13543 10 PLLAAHALAFSRNEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRGDRSRFMAYLGH 89 (214)
T ss_pred ceEEEeeEEEecCCceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccchhhhhceEEeec
Confidence 469999999999888899999999999999999999999999999999999999999999987432 4999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++..|+.||+..... +. ....++.+.+++..+|+
T Consensus 90 ~~~~~~~~t~~e~l~~~~~---------------~~---------------------------~~~~~~~~~~~l~~~~l 127 (214)
T PRK13543 90 LPGLKADLSTLENLHFLCG---------------LH---------------------------GRRAKQMPGSALAIVGL 127 (214)
T ss_pred CcccccCCcHHHHHHHHHH---------------hc---------------------------CCcHHHHHHHHHHHcCC
Confidence 9887777899999752110 00 00112334566777888
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCe
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTK 325 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ 325 (645)
. +..++++.+||||||||++||||++.+|++|||||||++||+.+++++.++|+ +.+.|||++|||++++.++||+
T Consensus 128 ~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~ 206 (214)
T PRK13543 128 A-GYEDTLVRQLSAGQKKRLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTR 206 (214)
T ss_pred h-hhccCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcce
Confidence 6 56788899999999999999999999999999999999999999999988874 3589999999999999999999
Q ss_pred EEEEcC
Q 006442 326 IVETEM 331 (645)
Q Consensus 326 i~~l~~ 331 (645)
+++++.
T Consensus 207 i~~l~~ 212 (214)
T PRK13543 207 MLTLEA 212 (214)
T ss_pred EEEEee
Confidence 998863
No 258
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=4.2e-40 Score=333.96 Aligned_cols=203 Identities=27% Similarity=0.412 Sum_probs=173.5
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------cchhc
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFE 494 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~~ 494 (645)
+|+++|++++|+++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~ 80 (236)
T TIGR03864 1 ALEVAGLSFAYGARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVF 80 (236)
T ss_pred CEEEEeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeC
Confidence 478999999999888999999999999999999999999999999999999999999999997652 23445
Q ss_pred cchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEee
Q 006442 495 QNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (645)
Q Consensus 495 q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 568 (645)
|+ ..+.+..|+.+|+...... . ....+.++++.+|+. +..++++.+||||||||++|||||+.+|++||||
T Consensus 81 q~--~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 157 (236)
T TIGR03864 81 QQ--PTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLA-ERADDKVRELNGGHRRRVEIARALLHRPALLLLD 157 (236)
T ss_pred CC--CCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 44 3455678999998754321 1 123567889999995 6678999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 569 EPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 569 EPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
|||++||+.+++.+.+.|.++ +.|||+||||++++.. ||++++|++|++.. .++.+++...
T Consensus 158 EP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~-~~~~~~~~~~ 222 (236)
T TIGR03864 158 EPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEA-DDRLVVLHRGRVLA-DGAAAELRGA 222 (236)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhh-CCEEEEEeCCeEEE-eCCHHHHHHH
Confidence 999999999999999998754 4699999999999975 99999999999985 4666665543
No 259
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-40 Score=336.30 Aligned_cols=209 Identities=18% Similarity=0.267 Sum_probs=169.6
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcC---CCC--CccEEEEcCCC----------
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQ---EEP--DSGNVIKAKSN---------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~---~~p--~~G~I~~~~~~---------- 160 (645)
++|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+ ++| ++|+|.++|..
T Consensus 2 ~~l~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 81 (250)
T PRK14245 2 VKIDARDVNFWYGDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDE 81 (250)
T ss_pred cEEEEEEEEEEECCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHH
Confidence 469999999999988899999999999999999999999999999999997 455 58999988642
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
..++|++|++.++. .|+.+|+...+... .. ......++.
T Consensus 82 ~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~---------------~~-----------------------~~~~~~~~~ 122 (250)
T PRK14245 82 LRKNVGMVFQRPNPFP-KSIFENVAYGLRVN---------------GV-----------------------KDNAFIRQR 122 (250)
T ss_pred HhhheEEEecCCccCc-ccHHHHHHHHHHHc---------------CC-----------------------CcHHHHHHH
Confidence 24999999987765 69999985321100 00 000012234
Q ss_pred HHhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006442 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (645)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (645)
+.++++.+|+.. ...++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .++|||++|
T Consensus 123 ~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivt 202 (250)
T PRK14245 123 VEETLKGAALWDEVKDKLKESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVT 202 (250)
T ss_pred HHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 556677777742 346778899999999999999999999999999999999999999999988753 478999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
||++++.++||+++++++|++. ..|...+.
T Consensus 203 H~~~~~~~~~d~v~~l~~G~~~-~~~~~~~~ 232 (250)
T PRK14245 203 HNMQQAARVSDKTAFFYMGEMV-EYDDTKKI 232 (250)
T ss_pred CCHHHHHhhCCEEEEEECCEEE-EECCHHHH
Confidence 9999999999999999999984 55655443
No 260
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.5e-40 Score=330.01 Aligned_cols=189 Identities=28% Similarity=0.441 Sum_probs=160.2
Q ss_pred EEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------------ceEEE
Q 006442 100 LENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIAF 165 (645)
Q Consensus 100 i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------------~~i~~ 165 (645)
++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 1 i~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~ 80 (206)
T TIGR03608 1 LKNISKKFGDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKLGY 80 (206)
T ss_pred CcceEEEECCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCeeE
Confidence 4799999998889999999999999999999999999999999999999999999988643 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.+++..|++||+...... . ........+++.++++.
T Consensus 81 ~~q~~~~~~~~t~~e~~~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~ 121 (206)
T TIGR03608 81 LFQNFALIENETVEENLDLGLKY---------------K------------------------KLSKKEKREKKKEALEK 121 (206)
T ss_pred EecchhhccCCcHHHHHHHHHHh---------------c------------------------CCCHHHHHHHHHHHHHH
Confidence 99999887788999998532100 0 00111223456677888
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhh
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQL 322 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~ 322 (645)
+|+. +..++.+.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++||+++++ .+
T Consensus 122 ~~l~-~~~~~~~~~lS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~ 199 (206)
T TIGR03608 122 VGLN-LKLKQKIYELSGGEQQRVALARAILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVA-KQ 199 (206)
T ss_pred cCch-hhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-hh
Confidence 8885 567888999999999999999999999999999999999999999999988753 489999999999976 57
Q ss_pred cCeEEEE
Q 006442 323 CTKIVET 329 (645)
Q Consensus 323 ~d~i~~l 329 (645)
||+++++
T Consensus 200 ~d~i~~l 206 (206)
T TIGR03608 200 ADRVIEL 206 (206)
T ss_pred cCEEEeC
Confidence 9999864
No 261
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-40 Score=366.33 Aligned_cols=248 Identities=23% Similarity=0.380 Sum_probs=183.0
Q ss_pred HHHHhhhhhhHhhhccCchhhhcccccccCCCCCCCCCCccEEEEeEEEEeCCe---eeeeeeeEEEECCcEEEEECCCC
Q 006442 57 KSIAKAQSDVESLFSSSADEFENKKYSNKQSNTGASSISSGVKLENISKSYKGV---TVLKDVTWEVKKGEKVGLVGVNG 133 (645)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~nls~~y~~~---~vL~~vsl~i~~Ge~~~lvG~NG 133 (645)
..+.++..+.+++|+.-++.+..... ....+ . .....|+++||+|.|+.+ ++|+|+||+|++||+||||||||
T Consensus 429 s~lmkgvGAs~rvFel~dr~P~i~~~-G~~~p--~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSG 504 (716)
T KOG0058|consen 429 SELMKGVGASERVFELMDRKPRIPLT-GTLAP--D-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSG 504 (716)
T ss_pred HHHHHhcchHHHHHHHhccCCCCCCC-Ccccc--c-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCC
Confidence 44555556667777665443322221 11111 1 244569999999999876 49999999999999999999999
Q ss_pred ccHHHHHHHHHcCCCCCccEEEEcCCCc----------eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 006442 134 AGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKAL 203 (645)
Q Consensus 134 sGKSTLl~~l~G~~~p~~G~I~~~~~~~----------~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~ 203 (645)
+||||+.++|..+|+|++|+|.++|.+. +||+|.|||-+ ++.||+|||..+..+. . .+.+..+-
T Consensus 505 sGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvL-Fs~sI~eNI~YG~~~~-t----~e~i~~AA 578 (716)
T KOG0058|consen 505 SGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVL-FSGSIRENIAYGLDNA-T----DEEIEAAA 578 (716)
T ss_pred CCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeecccee-ecccHHHHHhcCCCCC-C----HHHHHHHH
Confidence 9999999999999999999999998754 59999999987 7899999998655421 0 01111111
Q ss_pred hhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEE
Q 006442 204 ESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLL 283 (645)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLL 283 (645)
+.+ ...+++..+.+ |..+..++ ...+||||||||+||||||+++|.||||
T Consensus 579 k~A-Nah~FI~~~p~----------------------------gY~T~VGE-kG~qLSGGQKQRIAIARALlr~P~VLIL 628 (716)
T KOG0058|consen 579 KMA-NAHEFITNFPD----------------------------GYNTVVGE-KGSQLSGGQKQRIAIARALLRNPRVLIL 628 (716)
T ss_pred HHh-ChHHHHHhCcc----------------------------ccccccCC-ccccccchHHHHHHHHHHHhcCCCEEEE
Confidence 110 01112111111 22222332 2689999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHHHHH
Q 006442 284 DEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVL 346 (645)
Q Consensus 284 DEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~~~ 346 (645)
||.||+||.++...+.+.|.+ .++|||+|.|++..+.. +|+|+++++|++. -.|++++.+.
T Consensus 629 DEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~-Ad~Ivvi~~G~V~-E~G~h~eLl~ 691 (716)
T KOG0058|consen 629 DEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRH-ADQIVVIDKGRVV-EMGTHDELLS 691 (716)
T ss_pred echhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhh-ccEEEEEcCCeEE-ecccHHHHhh
Confidence 999999999999999988853 57999999999999986 8999999999984 4566655443
No 262
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=5.3e-40 Score=348.07 Aligned_cols=211 Identities=20% Similarity=0.359 Sum_probs=173.2
Q ss_pred CccEEEEeEEEEeC----CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCC---ccEEEEcCCC-------
Q 006442 95 SSGVKLENISKSYK----GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD---SGNVIKAKSN------- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~----~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~---~G~I~~~~~~------- 160 (645)
.+.|+++|+++.|+ ...+|+||||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 10 ~~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~ 89 (330)
T PRK09473 10 DALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEK 89 (330)
T ss_pred CceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHH
Confidence 45799999999995 256999999999999999999999999999999999999996 9999998753
Q ss_pred -------ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCC
Q 006442 161 -------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN 231 (645)
Q Consensus 161 -------~~i~~v~Q~~--~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (645)
..|+|++|++ .+.+.+|+.+++...+.. . ....
T Consensus 90 ~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~---------------~-----------------------~~~~ 131 (330)
T PRK09473 90 ELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLML---------------H-----------------------KGMS 131 (330)
T ss_pred HHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHH---------------h-----------------------cCCC
Confidence 2599999998 466778998887532100 0 0011
Q ss_pred hhcHHHHHHhhchhcCCCc--ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cC
Q 006442 232 LDTLDAKVSKLMPELGFTA--DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQ 305 (645)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~--~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~ 305 (645)
..+..+++.++++.+|++. ...++++.+|||||+|||+|||||+.+|++||+||||++||+.++..+.++|+ +.
T Consensus 132 ~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~ 211 (330)
T PRK09473 132 KAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF 211 (330)
T ss_pred HHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc
Confidence 1223345667788888863 23467899999999999999999999999999999999999999999988764 34
Q ss_pred CCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 306 DVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 306 g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
|.|+|+||||++.+.++||+|++|.+|++. ..|+..+.
T Consensus 212 g~til~iTHdl~~~~~~~Dri~vm~~G~iv-e~g~~~~i 249 (330)
T PRK09473 212 NTAIIMITHDLGVVAGICDKVLVMYAGRTM-EYGNARDV 249 (330)
T ss_pred CCEEEEEECCHHHHHHhCCEEEEEECCEEE-EECCHHHH
Confidence 899999999999999999999999999984 45665443
No 263
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3.6e-40 Score=340.55 Aligned_cols=208 Identities=22% Similarity=0.352 Sum_probs=173.8
Q ss_pred CcEEEEEeeeeeeCC---------eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---
Q 006442 422 RSVVTIKNLEFGYED---------RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--- 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~---------~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--- 489 (645)
+++|+++||+++|+. +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~ 81 (267)
T PRK15112 2 ETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGD 81 (267)
T ss_pred cceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCc
Confidence 357999999999962 46999999999999999999999999999999999999999999999997653
Q ss_pred -------cchhccchhhcCCCCCCHHHHHHhhhcc---c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHH
Q 006442 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFC 555 (645)
Q Consensus 490 -------~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lA 555 (645)
.+|++|+....+.+..|+.+++...... . ..+.+.++++.+++.....++.+.+|||||||||+||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~la 161 (267)
T PRK15112 82 YSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLA 161 (267)
T ss_pred hhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHH
Confidence 2344554322244567888887643211 1 1235778899999954567888999999999999999
Q ss_pred HHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|||+.+|+||||||||++||+.+++.+.+.|.++ +.|||+||||++++..+|||+++|++|++.. .+..+++..
T Consensus 162 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~ 239 (267)
T PRK15112 162 RALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVE-RGSTADVLA 239 (267)
T ss_pred HHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEe-cCCHHHHhc
Confidence 9999999999999999999999999999998864 5699999999999999999999999999974 566666543
No 264
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3.3e-40 Score=337.61 Aligned_cols=202 Identities=26% Similarity=0.430 Sum_probs=173.3
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------------
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------- 489 (645)
+|+++|+++.|+++.+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK11264 3 AIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIRQ 82 (250)
T ss_pred cEEEeceEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHHH
Confidence 689999999998888999999999999999999999999999999999999999999999987652
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhh---ccc----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHH
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAA---EDW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~---~~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral 558 (645)
.+|++|+ ..+.+..|+.+|+.... ... ....+.++++.+++. ...++++.+|||||||||+|||||
T Consensus 83 ~~~~i~~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~Gq~qrv~la~al 159 (250)
T PRK11264 83 LRQHVGFVFQN--FNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLA-GKETSYPRRLSGGQQQRVAIARAL 159 (250)
T ss_pred hhhhEEEEecC--cccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-chhhCChhhCChHHHHHHHHHHHH
Confidence 1233343 34556789999997532 111 123467889999995 567899999999999999999999
Q ss_pred ccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++.++||++++|++|++.. .++.+++.
T Consensus 160 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 232 (250)
T PRK11264 160 AMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVE-QGPAKALF 232 (250)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE-eCCHHHHh
Confidence 9999999999999999999999999998764 4699999999999999999999999999985 46766654
No 265
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3e-40 Score=331.82 Aligned_cols=200 Identities=28% Similarity=0.416 Sum_probs=170.0
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------cchh
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNYF 493 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~~~ 493 (645)
|+++|++++|+++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (222)
T cd03224 1 LEVENLNAGYGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGYV 80 (222)
T ss_pred CEEeeEEeecCCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEEe
Confidence 47899999998888999999999999999999999999999999999999999999999997652 2344
Q ss_pred ccchhhcCCCCCCHHHHHHhhhccc----cHHHHHHHHhhc-CCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEee
Q 006442 494 EQNQAEALDLDKTVLETVAEAAEDW----RIDDIKGLLGRC-NFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~~~----~~~~~~~~L~~~-~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 568 (645)
+|. ..+.+..|+.+|+....... ....+..+++.+ ++ .+..++++.+|||||||||+|||||+.+|++||||
T Consensus 81 ~q~--~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l-~~~~~~~~~~LS~G~~qrv~laral~~~p~llllD 157 (222)
T cd03224 81 PEG--RRIFPELTVEENLLLGAYARRRAKRKARLERVYELFPRL-KERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLD 157 (222)
T ss_pred ccc--cccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHHhh-hhhhhCchhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 443 34566789999997653221 123455677777 45 45678999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHH
Q 006442 569 EPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQV 628 (645)
Q Consensus 569 EPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~ 628 (645)
|||++||+.++..+.+.|+++ +.|||++|||++++.++||++++|++|++.. .++.+++
T Consensus 158 EPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 219 (222)
T cd03224 158 EPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVL-EGTAAEL 219 (222)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEE-eCCHHHH
Confidence 999999999999999999865 4699999999999999999999999999985 4665554
No 266
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.6e-40 Score=329.69 Aligned_cols=190 Identities=35% Similarity=0.515 Sum_probs=163.0
Q ss_pred EEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cchh
Q 006442 426 TIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (645)
Q Consensus 426 ~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (645)
+++|+++.|++ +.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 46899999987 78999999999999999999999999999999999999999999999997652 1344
Q ss_pred ccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEe
Q 006442 494 EQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 567 (645)
+|... ...+..|+.+|+...... . ....+.++++.+++. +..++++.+|||||||||+|||||+.+|++|||
T Consensus 81 ~q~~~-~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~llll 158 (211)
T cd03225 81 FQNPD-DQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLE-GLRDRSPFTLSGGQKQRVAIAGVLAMDPDILLL 158 (211)
T ss_pred ecChh-hhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 44421 123568999998764321 1 123567889999995 667899999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCe
Q 006442 568 DEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSN 617 (645)
Q Consensus 568 DEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~ 617 (645)
||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+
T Consensus 159 DEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 159 DEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999865 3599999999999999999999999874
No 267
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.4e-40 Score=330.37 Aligned_cols=191 Identities=28% Similarity=0.434 Sum_probs=166.0
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc------------cch
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------PNY 492 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------~~~ 492 (645)
|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 1 l~~~~l~~~~~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~ 80 (213)
T cd03262 1 IEIKNLHKSFGDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVGM 80 (213)
T ss_pred CEEEEEEEEECCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcceE
Confidence 47899999998888999999999999999999999999999999999999999999999998752 123
Q ss_pred hccchhhcCCCCCCHHHHHHhhhc---cc----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeE
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAE---DW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~---~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 565 (645)
++|+ ..+.+..|+.+|+..... .. ....+.++++.+++. +..++++.+|||||||||+|||||+.+|++|
T Consensus 81 ~~q~--~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 157 (213)
T cd03262 81 VFQQ--FNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLA-DKADAYPAQLSGGQQQRVAIARALAMNPKVM 157 (213)
T ss_pred Eecc--cccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhhCccccCHHHHHHHHHHHHHhcCCCEE
Confidence 4443 345567899999876421 11 123567889999994 5679999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeE
Q 006442 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (645)
Q Consensus 566 lLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i 618 (645)
||||||+|||+.+++.+.+.|+++ +.|||++|||++++.++||++++|++|++
T Consensus 158 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 158 LFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999865 46999999999999999999999999874
No 268
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.6e-40 Score=332.45 Aligned_cols=193 Identities=30% Similarity=0.475 Sum_probs=166.1
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCC-----CCCeeEEEECceecc----------
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLE-----KPRGGEVLLGEHNVL---------- 489 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~-----~p~~G~i~~~g~~~~---------- 489 (645)
|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|++ +|++|+|.++|.++.
T Consensus 1 i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (227)
T cd03260 1 IELRDLNVYYGDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLELR 80 (227)
T ss_pred CEEEEEEEEcCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHHH
Confidence 47899999998888999999999999999999999999999999999999 999999999998752
Q ss_pred --cchhccchhhcCCCCCCHHHHHHhhhcc---c----cHHHHHHHHhhcCCChhhhccC--cCcCCHhHHHHHHHHHHH
Q 006442 490 --PNYFEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFKADMLDRK--VSLLSGGEKARLAFCKFM 558 (645)
Q Consensus 490 --~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~----~~~~~~~~L~~~~l~~~~~~~~--~~~LSgGqkqrv~lAral 558 (645)
.+|++|+ ..+. ..|+.+|+...... . ...++..+++.+++. +..+++ +.+|||||||||+|||||
T Consensus 81 ~~i~~~~q~--~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~LSgG~~qrv~la~al 156 (227)
T cd03260 81 RRVGMVFQK--PNPF-PGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALW-DEVKDRLHALGLSGGQQQRLCLARAL 156 (227)
T ss_pred hhEEEEecC--chhc-cccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCC-hHHhccCCcccCCHHHHHHHHHHHHH
Confidence 1244443 2344 78999999764321 1 124577889999995 445555 599999999999999999
Q ss_pred ccCCCeEEeeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhCCEEEEEeCCeEEee
Q 006442 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDY 621 (645)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~ 621 (645)
+.+|++|||||||++||+.++..+.+.|+++. .|||++|||++++.++||++++|++|+++..
T Consensus 157 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~ 221 (227)
T cd03260 157 ANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEF 221 (227)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEe
Confidence 99999999999999999999999999998763 5999999999999999999999999999854
No 269
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=4.5e-40 Score=339.49 Aligned_cols=205 Identities=25% Similarity=0.446 Sum_probs=173.6
Q ss_pred EEEEEeeeeeeC---------CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----
Q 006442 424 VVTIKNLEFGYE---------DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~---------~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----- 489 (645)
+|+++||++.|+ ++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 589999999995 367999999999999999999999999999999999999999999999997652
Q ss_pred --------cchhccchhhcCCCCCCHHHHHHhhhc---c----ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHH
Q 006442 490 --------PNYFEQNQAEALDLDKTVLETVAEAAE---D----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAF 554 (645)
Q Consensus 490 --------~~~~~q~~~~~l~~~~tv~e~v~~~~~---~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~l 554 (645)
.+|++|+....+.+..|+.+|+..... . ...+++.++++.+++.....++++.+|||||||||+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~l 161 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINI 161 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHH
Confidence 234444432235567899999864321 1 1134577899999995456789999999999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 162 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 239 (265)
T TIGR02769 162 ARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVE-ECDVAQLL 239 (265)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEE-ECCHHHHc
Confidence 99999999999999999999999999999998754 5699999999999999999999999999985 46666654
No 270
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-40 Score=351.79 Aligned_cols=198 Identities=26% Similarity=0.412 Sum_probs=168.8
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------------ce
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MK 162 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------------~~ 162 (645)
+|++ |++++|++..+ |+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..
T Consensus 1 ~l~~-~l~k~~~~~~~--~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~ 77 (352)
T PRK11144 1 MLEL-NFKQQLGDLCL--TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKRR 77 (352)
T ss_pred CeEE-EEEEEeCCEEE--EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhCC
Confidence 3777 99999987543 8999999999999999999999999999999999999999987632 25
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
++|++|++.+++.+||+||+...+.. ...+++.++
T Consensus 78 i~~v~q~~~l~~~~tv~enl~~~~~~---------------------------------------------~~~~~~~~~ 112 (352)
T PRK11144 78 IGYVFQDARLFPHYKVRGNLRYGMAK---------------------------------------------SMVAQFDKI 112 (352)
T ss_pred EEEEcCCcccCCCCcHHHHHHhhhhh---------------------------------------------hhHHHHHHH
Confidence 99999999988899999998532110 012345567
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~ 318 (645)
++.+|+. +..++.+.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .|.|||+||||+++
T Consensus 113 l~~~gl~-~~~~~~~~~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~ 191 (352)
T PRK11144 113 VALLGIE-PLLDRYPGSLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDE 191 (352)
T ss_pred HHHcCCc-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHH
Confidence 7888886 578899999999999999999999999999999999999999999999887742 48999999999999
Q ss_pred HHhhcCeEEEEcCceeEEeccChHHH
Q 006442 319 LDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+..+||+|++|++|++. ..|+..+.
T Consensus 192 ~~~~~d~i~~l~~G~i~-~~g~~~~i 216 (352)
T PRK11144 192 ILRLADRVVVLEQGKVK-AFGPLEEV 216 (352)
T ss_pred HHHhCCEEEEEeCCEEE-EecCHHHH
Confidence 99999999999999984 44554443
No 271
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-40 Score=336.07 Aligned_cols=207 Identities=20% Similarity=0.293 Sum_probs=167.4
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~----------- 160 (645)
+|+++|++|+|+++++|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 4 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~ 83 (251)
T PRK14251 4 IISAKDVHLSYGNYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVEL 83 (251)
T ss_pred eEEEEeeEEEECCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHh
Confidence 5899999999998889999999999999999999999999999999999987 479999987642
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..++|++|++.++. .|++||+...+... .. ......++++
T Consensus 84 ~~~i~~~~q~~~~~~-~tv~enl~~~~~~~---------------~~-----------------------~~~~~~~~~~ 124 (251)
T PRK14251 84 RKEVGMVFQQPTPFP-FSVYDNVAYGLKIA---------------GV-----------------------KDKELIDQRV 124 (251)
T ss_pred hccEEEEecCCccCC-CcHHHHHHHHHHHc---------------CC-----------------------CCHHHHHHHH
Confidence 24999999988764 79999985321100 00 0000112234
Q ss_pred HhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006442 240 SKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (645)
Q Consensus 240 ~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (645)
.++++.+++. ....++.+.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++||
T Consensus 125 ~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH 204 (251)
T PRK14251 125 EESLKQAAIWKETKDNLDRNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTH 204 (251)
T ss_pred HHHHHHcCCCcchHHHhccChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEEC
Confidence 4555666662 1345778899999999999999999999999999999999999999999888754 3689999999
Q ss_pred CHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+++++.++||+|+++++|++. ..|...+
T Consensus 205 ~~~~~~~~~d~i~~l~~G~i~-~~~~~~~ 232 (251)
T PRK14251 205 NLQQAGRISDQTAFLMNGDLI-EAGPTEE 232 (251)
T ss_pred CHHHHHhhcCEEEEEECCEEE-EeCCHHH
Confidence 999999999999999999984 3354433
No 272
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-40 Score=328.69 Aligned_cols=192 Identities=27% Similarity=0.387 Sum_probs=167.3
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------cchhcc
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFEQ 495 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~~q 495 (645)
|+++|++++|+++++|+++||+|++| +++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 1 i~~~~~~~~~~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 79 (211)
T cd03264 1 LQLENLTKRYGKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLPQ 79 (211)
T ss_pred CEEEEEEEEECCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEecC
Confidence 47899999998888999999999999 99999999999999999999999999999999997642 234444
Q ss_pred chhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeC
Q 006442 496 NQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 569 (645)
+ ..+++..|+.+|+...... ...+.+..+++.+++. +..++++.+|||||||||+|||||+.+|++|||||
T Consensus 80 ~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDE 156 (211)
T cd03264 80 E--FGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLG-DRAKKKIGSLSGGMRRRVGIAQALVGDPSILIVDE 156 (211)
T ss_pred C--CcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCH-HHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 4 3455678999998754211 1124577889999994 66789999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 570 PTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 570 Pt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
||++||+.+++.+.+.|+++ +.|||+||||++++.++|||+++|++|++..
T Consensus 157 Pt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~ 209 (211)
T cd03264 157 PTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVF 209 (211)
T ss_pred CcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999876 4699999999999999999999999999874
No 273
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.3e-40 Score=329.63 Aligned_cols=191 Identities=29% Similarity=0.391 Sum_probs=165.2
Q ss_pred EEEEeeeeeeCC-eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-------------c
Q 006442 425 VTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------P 490 (645)
Q Consensus 425 i~~~~v~~~y~~-~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------~ 490 (645)
|+++|+++.|++ +.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 80 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKI 80 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHhe
Confidence 478999999974 67999999999999999999999999999999999999999999999998652 1
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCe
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 564 (645)
+|++|+ ..+.+..|+.+|+...... . ..+.+..+++.+++. +..++++.+||||||||++|||||+.+|++
T Consensus 81 ~~v~q~--~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~l 157 (214)
T cd03292 81 GVVFQD--FRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLS-HKHRALPAELSGGEQQRVAIARAIVNSPTI 157 (214)
T ss_pred EEEecC--chhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHhhCChhhcCHHHHHHHHHHHHHHcCCCE
Confidence 233443 3456678999999765321 1 123567889999994 567899999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeE
Q 006442 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (645)
Q Consensus 565 LlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i 618 (645)
|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|++
T Consensus 158 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 158 LIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999865 46999999999999999999999999874
No 274
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-40 Score=347.88 Aligned_cols=214 Identities=21% Similarity=0.291 Sum_probs=172.0
Q ss_pred cEEEEeEEEEeC----CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC----CCccEEEEcCCC--------
Q 006442 97 GVKLENISKSYK----GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE----PDSGNVIKAKSN-------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~----~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~----p~~G~I~~~~~~-------- 160 (645)
+|+++|++++|+ ...+|+||||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 589999999993 4579999999999999999999999999999999999987 589999998742
Q ss_pred ------ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCCh
Q 006442 161 ------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (645)
Q Consensus 161 ------~~i~~v~Q~~~--~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (645)
..|+|++|++. +.+..||.+++...+... . .... + ....
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~-~-----------~~~~------------------~---~~~~ 129 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGW-T-----------YKGR------------------W---WQRF 129 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhh-h-----------cccc------------------c---cccH
Confidence 25999999985 445678988875211000 0 0000 0 0000
Q ss_pred hcHHHHHHhhchhcCCCc--ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CC
Q 006442 233 DTLDAKVSKLMPELGFTA--DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QD 306 (645)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~--~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g 306 (645)
....+++.++|+.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.++|++ .|
T Consensus 130 ~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g 209 (330)
T PRK15093 130 GWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNN 209 (330)
T ss_pred HHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 122356778899999963 246788999999999999999999999999999999999999999999888753 48
Q ss_pred CeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 307 VPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 307 ~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
.|||+||||++++.++||+|++|.+|++ ...|+..++
T Consensus 210 ~tii~itHdl~~v~~~~dri~vm~~G~i-ve~g~~~~i 246 (330)
T PRK15093 210 TTILLISHDLQMLSQWADKINVLYCGQT-VETAPSKEL 246 (330)
T ss_pred CEEEEEECCHHHHHHhCCEEEEEECCEE-EEECCHHHH
Confidence 9999999999999999999999999998 445654443
No 275
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-40 Score=335.29 Aligned_cols=208 Identities=22% Similarity=0.279 Sum_probs=167.6
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCC--CC---CccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EP---DSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~--~p---~~G~I~~~~~~----------- 160 (645)
+|+++|++++|+++++|+|+||+|++||+++|+||||||||||+++|+|+. +| ++|+|.++|..
T Consensus 5 ~l~~~~l~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 84 (252)
T PRK14239 5 ILQVSDLSVYYNKKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDL 84 (252)
T ss_pred eEEEEeeEEEECCeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhh
Confidence 699999999999888999999999999999999999999999999999985 36 59999988632
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..++|++|++.++. .|+.||+...... ... ......+..+
T Consensus 85 ~~~i~~v~q~~~~~~-~tv~enl~~~~~~---------------~~~-----------------------~~~~~~~~~~ 125 (252)
T PRK14239 85 RKEIGMVFQQPNPFP-MSIYENVVYGLRL---------------KGI-----------------------KDKQVLDEAV 125 (252)
T ss_pred hhcEEEEecCCccCc-CcHHHHHHHHHHH---------------cCC-----------------------CcHHHHHHHH
Confidence 25999999988765 8999998532110 000 0000112334
Q ss_pred HhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006442 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (645)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (645)
.++++.+++.. +..++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .++|||++||
T Consensus 126 ~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH 205 (252)
T PRK14239 126 EKSLKGASIWDEVKDRLHDSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTR 205 (252)
T ss_pred HHHHHHcCCchhHHHHHhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEEC
Confidence 45555666531 345778899999999999999999999999999999999999999999988753 3689999999
Q ss_pred CHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+++++..+||+|+++++|++. +.|...+.
T Consensus 206 ~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 234 (252)
T PRK14239 206 SMQQASRISDRTGFFLDGDLI-EYNDTKQM 234 (252)
T ss_pred CHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999999999984 45654443
No 276
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-40 Score=336.83 Aligned_cols=210 Identities=20% Similarity=0.279 Sum_probs=169.4
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC--C---CccEEEEcCCC---------
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE--P---DSGNVIKAKSN--------- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~--p---~~G~I~~~~~~--------- 160 (645)
.++|+++|+++.|+++++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.+
T Consensus 10 ~~~l~i~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 10 QEVYQINGMNLWYGQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred CceEEEeeEEEEECCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 346999999999998889999999999999999999999999999999999987 3 59999987642
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..++|++|++.+++ .|++||+...... .. .........
T Consensus 90 ~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~---------------~~-----------------------~~~~~~~~~ 130 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFP-QSIFDNVAYGPRI---------------HG-----------------------TKNKKKLQE 130 (259)
T ss_pred HHhhceEEEecCCcccc-cCHHHHHHhHHHh---------------cC-----------------------CCCHHHHHH
Confidence 24999999988765 4999998521100 00 000011223
Q ss_pred HHHhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006442 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (645)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (645)
++.++++.+|+.. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .++|||+|
T Consensus 131 ~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiv 210 (259)
T PRK14274 131 IVEKSLKDVALWDEVKDRLHTQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIV 210 (259)
T ss_pred HHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 3445666666632 345778899999999999999999999999999999999999999999888753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
||+++++.++||+++++++|++. ..|+.+++
T Consensus 211 tH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 241 (259)
T PRK14274 211 THNMQQAARVSDQTAFFYMGELV-ECNDTNKM 241 (259)
T ss_pred EcCHHHHHHhCCEEEEEECCEEE-EECCHHHH
Confidence 99999999999999999999984 45665543
No 277
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=7.8e-40 Score=337.19 Aligned_cols=202 Identities=25% Similarity=0.394 Sum_probs=174.6
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC---eeEEEECceecc----------
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR---GGEVLLGEHNVL---------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~---~G~i~~~g~~~~---------- 489 (645)
++|+++||++.|+++.+|+++||+|.+||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 3 ~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (262)
T PRK09984 3 TIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIR 82 (262)
T ss_pred cEEEEeeEEEEeCCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHH
Confidence 4799999999999889999999999999999999999999999999999999886 499999997652
Q ss_pred -----cchhccchhhcCCCCCCHHHHHHhhhc--------------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHH
Q 006442 490 -----PNYFEQNQAEALDLDKTVLETVAEAAE--------------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKA 550 (645)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~v~~~~~--------------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkq 550 (645)
.+|++|+ ..+++..|+.+|+..... .....++.++++.+++. +..++++.+|||||||
T Consensus 83 ~~~~~i~~~~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~q 159 (262)
T PRK09984 83 KSRANTGYIFQQ--FNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMV-HFAHQRVSTLSGGQQQ 159 (262)
T ss_pred HHHhheEEEccc--cccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCH-HHHhCCccccCHHHHH
Confidence 1344444 345667899999975421 01124578899999994 6789999999999999
Q ss_pred HHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChh
Q 006442 551 RLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (645)
Q Consensus 551 rv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~ 626 (645)
||+|||||+.+|+||||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|++.. .|+++
T Consensus 160 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~-~g~~~ 238 (262)
T PRK09984 160 RVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFY-DGSSQ 238 (262)
T ss_pred HHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHH
Confidence 999999999999999999999999999999999999865 4699999999999999999999999999974 57777
Q ss_pred HH
Q 006442 627 QV 628 (645)
Q Consensus 627 ~~ 628 (645)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 76
No 278
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-40 Score=334.09 Aligned_cols=202 Identities=26% Similarity=0.360 Sum_probs=173.7
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------------
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------- 489 (645)
+|+++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 81 (242)
T PRK11124 2 SIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELR 81 (242)
T ss_pred EEEEEeeEEEECCeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHH
Confidence 488999999998888999999999999999999999999999999999999999999999998651
Q ss_pred --cchhccchhhcCCCCCCHHHHHHhhh-c---c---ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHcc
Q 006442 490 --PNYFEQNQAEALDLDKTVLETVAEAA-E---D---WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (645)
Q Consensus 490 --~~~~~q~~~~~l~~~~tv~e~v~~~~-~---~---~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~ 560 (645)
.+|++|+ ..+++..|+.+|+.... . . .....+.++++.+|+. ...++++.+||||||||++|||||+.
T Consensus 82 ~~i~~~~q~--~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~ 158 (242)
T PRK11124 82 RNVGMVFQQ--YNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLK-PYADRFPLHLSGGQQQRVAIARALMM 158 (242)
T ss_pred hheEEEecC--ccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 1244443 34566789999986421 1 1 1123577889999994 67799999999999999999999999
Q ss_pred CCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 561 ~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+|++|||||||++||+.++..+.+.|++. +.|||+||||.+++.++||++++|++|++.. .++.+++.
T Consensus 159 ~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~-~~~~~~~~ 229 (242)
T PRK11124 159 EPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVE-QGDASCFT 229 (242)
T ss_pred CCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE-eCCHHHhc
Confidence 99999999999999999999999999864 5699999999999999999999999999985 57776653
No 279
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-40 Score=334.10 Aligned_cols=208 Identities=23% Similarity=0.309 Sum_probs=169.9
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC---CCccEEEEcCCC----------ceE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE---PDSGNVIKAKSN----------MKI 163 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~---p~~G~I~~~~~~----------~~i 163 (645)
+|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+ ..|
T Consensus 2 ~~~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i 81 (246)
T PRK14269 2 IAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNV 81 (246)
T ss_pred ceeeeeeEEEECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhE
Confidence 4899999999998889999999999999999999999999999999999974 689999998743 259
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhc
Q 006442 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (645)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (645)
+|++|++.++. .|++||+...... .... -.....+.++.+++
T Consensus 82 ~~~~q~~~l~~-~tv~eni~~~~~~---------------~~~~----------------------~~~~~~~~~~~~~l 123 (246)
T PRK14269 82 GMVFQQPNVFV-KSIYENISYAPKL---------------HGMI----------------------KNKDEEEALVVDCL 123 (246)
T ss_pred EEEecCCcccc-ccHHHHhhhHHhh---------------cCcc----------------------cChHHHHHHHHHHH
Confidence 99999998765 7999998532100 0000 00011233455677
Q ss_pred hhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHH
Q 006442 244 PELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAF 318 (645)
Q Consensus 244 ~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~ 318 (645)
+.+|+.+ ...++.+.+|||||||||+|||||+.+|++|||||||++||+.++.++.+.|++ .++|||++||++++
T Consensus 124 ~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~ 203 (246)
T PRK14269 124 QKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQ 203 (246)
T ss_pred HHcCCChhhhHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHH
Confidence 7777742 245777899999999999999999999999999999999999999999988753 48899999999999
Q ss_pred HHhhcCeEEEEcCceeEEeccChHH
Q 006442 319 LDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+..+||+++++++|++. ..|...+
T Consensus 204 ~~~~~d~i~~l~~G~i~-~~g~~~~ 227 (246)
T PRK14269 204 GKRVADYTAFFHLGELI-EFGESKE 227 (246)
T ss_pred HHhhCcEEEEEECCEEE-EECCHHH
Confidence 99999999999999984 4455443
No 280
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3.9e-40 Score=329.00 Aligned_cols=196 Identities=26% Similarity=0.371 Sum_probs=165.9
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEecc
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (645)
++++|++++|+. .+.|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 ~~~~~l~~~~~~--~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q~ 78 (213)
T TIGR01277 1 LALDKVRYEYEH--LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQE 78 (213)
T ss_pred CeEEeeeEEeCC--cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEecc
Confidence 468999999974 5789999999999999999999999999999999999999999998743 259999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCC
Q 006442 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (645)
Q Consensus 170 ~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (645)
+.+++..|+.||+...+.... ......++++.++++.+|+.
T Consensus 79 ~~~~~~~t~~en~~~~~~~~~---------------------------------------~~~~~~~~~~~~~l~~~~l~ 119 (213)
T TIGR01277 79 NNLFAHLTVRQNIGLGLHPGL---------------------------------------KLNAEQQEKVVDAAQQVGIA 119 (213)
T ss_pred CccCCCCcHHHHHHhHhhccC---------------------------------------CccHHHHHHHHHHHHHcCcH
Confidence 988778899999853211000 00001133456678888885
Q ss_pred cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 006442 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (645)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ 325 (645)
+..++.+.+||||||||++|||||+.+|++|||||||++||+.++..+.++|++ .+.|||+|||+.+++.++||+
T Consensus 120 -~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~ 198 (213)
T TIGR01277 120 -DYLDRLPEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQ 198 (213)
T ss_pred -HHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCe
Confidence 567888999999999999999999999999999999999999999999887743 478999999999999999999
Q ss_pred EEEEcCceeE
Q 006442 326 IVETEMGVSR 335 (645)
Q Consensus 326 i~~l~~G~~~ 335 (645)
++++++|++.
T Consensus 199 v~~l~~g~i~ 208 (213)
T TIGR01277 199 IAVVSQGKIK 208 (213)
T ss_pred EEEEECCeEE
Confidence 9999999874
No 281
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-40 Score=332.90 Aligned_cols=205 Identities=30% Similarity=0.428 Sum_probs=172.6
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEecc
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (645)
|+++|++++|++. +|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 l~~~~l~~~~~~~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~q~ 79 (235)
T cd03299 1 LKVENLSKDWKEF-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQN 79 (235)
T ss_pred CeeEeEEEEeCCc-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEeec
Confidence 4789999999865 8999999999999999999999999999999999999999999998642 269999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCC
Q 006442 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (645)
Q Consensus 170 ~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (645)
+.+++..|+.||+...+.. .........+.+.++++.+|+.
T Consensus 80 ~~~~~~~t~~e~l~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~~~~l~ 120 (235)
T cd03299 80 YALFPHMTVYKNIAYGLKK---------------------------------------RKVDKKEIERKVLEIAEMLGID 120 (235)
T ss_pred CccCCCccHHHHHHHHHHH---------------------------------------cCCCHHHHHHHHHHHHHHcCCh
Confidence 8887788999998532110 0001112334556778888885
Q ss_pred cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 006442 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (645)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ 325 (645)
+..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++++.+.|++ .+.|||++||+++++.++||+
T Consensus 121 -~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~ 199 (235)
T cd03299 121 -HLLNRKPETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADK 199 (235)
T ss_pred -hHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCE
Confidence 677888999999999999999999999999999999999999999999988753 389999999999999999999
Q ss_pred EEEEcCceeEEeccChHHH
Q 006442 326 IVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 326 i~~l~~G~~~~~~g~~~~~ 344 (645)
++++++|++. ..|+.++.
T Consensus 200 i~~l~~G~i~-~~~~~~~~ 217 (235)
T cd03299 200 VAIMLNGKLI-QVGKPEEV 217 (235)
T ss_pred EEEEECCEEE-EecCHHHH
Confidence 9999999874 45655443
No 282
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=6.9e-40 Score=330.60 Aligned_cols=194 Identities=28% Similarity=0.406 Sum_probs=166.7
Q ss_pred cEEEEEeeeeeeCC----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------
Q 006442 423 SVVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (645)
++|+++|++++|++ .++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 57999999999975 35999999999999999999999999999999999999999999999997652
Q ss_pred -----cchhccchhhcCCCCCCHHHHHHhhhc------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHH
Q 006442 490 -----PNYFEQNQAEALDLDKTVLETVAEAAE------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (645)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~v~~~~~------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral 558 (645)
.+|++|+ ..+.+..|+.+|+..... ....+++.++++.+++. +..++++..||||||||++|||||
T Consensus 85 ~~~~~i~~~~q~--~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Ge~qrl~la~al 161 (228)
T PRK10584 85 LRAKHVGFVFQS--FMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLG-KRLDHLPAQLSGGEQQRVALARAF 161 (228)
T ss_pred HHhheEEEEEcc--cccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhCChhhCCHHHHHHHHHHHHH
Confidence 1233433 345567899999875421 11234578899999995 667899999999999999999999
Q ss_pred ccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
+.+|++|||||||+|||+.+++.+.+.|+++ +.|||++|||++++.. ||++++|++|++.+
T Consensus 162 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~-~d~i~~l~~g~i~~ 226 (228)
T PRK10584 162 NGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAAR-CDRRLRLVNGQLQE 226 (228)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHh-CCEEEEEECCEEEe
Confidence 9999999999999999999999999999754 4699999999999865 99999999999864
No 283
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-40 Score=334.69 Aligned_cols=207 Identities=20% Similarity=0.304 Sum_probs=166.3
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~----------- 160 (645)
.|+++|+++.|+++++++|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|..
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (250)
T PRK14240 3 KISVKDLDLFYGDFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQL 82 (250)
T ss_pred eEEEEEEEEEECCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHH
Confidence 48999999999888899999999999999999999999999999999998763 69999988632
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..++|++|++.++. .|+.+|+...... .. ..+....++.+
T Consensus 83 ~~~i~~~~q~~~~~~-~t~~~ni~~~~~~---------------~~-----------------------~~~~~~~~~~~ 123 (250)
T PRK14240 83 RKRVGMVFQQPNPFP-MSIYDNVAYGPRT---------------HG-----------------------IKDKKKLDEIV 123 (250)
T ss_pred hccEEEEecCCccCc-ccHHHHHHHHHHh---------------cC-----------------------CCCHHHHHHHH
Confidence 25999999987765 8999998532100 00 00000122334
Q ss_pred HhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006442 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (645)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (645)
.++++.+++.. ...++++.+||||||||++|||||+.+|++|||||||++||+.++.++.++|++ .+.|||++||
T Consensus 124 ~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH 203 (250)
T PRK14240 124 EKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTH 203 (250)
T ss_pred HHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEe
Confidence 44555555421 345778899999999999999999999999999999999999999999888753 3789999999
Q ss_pred CHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+++++.++||+++++++|++. ..|..++
T Consensus 204 ~~~~~~~~~d~v~~l~~G~i~-~~~~~~~ 231 (250)
T PRK14240 204 NMQQASRISDKTAFFLNGEIV-EFGDTVD 231 (250)
T ss_pred CHHHHHhhCCEEEEEECCEEE-EeCCHHH
Confidence 999999999999999999984 4455443
No 284
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-40 Score=329.12 Aligned_cols=192 Identities=30% Similarity=0.452 Sum_probs=162.9
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------------ceE
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKI 163 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------------~~i 163 (645)
+++ |++|+|++..+ |+||+|++ ++++|+||||||||||+++|+|+++|++|+|.++|.. ..+
T Consensus 2 ~~~-~l~~~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 77 (214)
T cd03297 2 LCV-DIEKRLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKI 77 (214)
T ss_pred cee-eeeEecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcE
Confidence 445 99999998766 99999999 9999999999999999999999999999999987632 259
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhc
Q 006442 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (645)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (645)
+|++|++.+++..|+.+|+...... ......++++.+++
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~-----------------------------------------~~~~~~~~~~~~~l 116 (214)
T cd03297 78 GLVFQQYALFPHLNVRENLAFGLKR-----------------------------------------KRNREDRISVDELL 116 (214)
T ss_pred EEEecCCccCCCCCHHHHHHHHHhh-----------------------------------------CCHHHHHHHHHHHH
Confidence 9999999887888999998522100 00001123456677
Q ss_pred hhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHH
Q 006442 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFL 319 (645)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l 319 (645)
+.+|+. ...++++.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|++ .|+|||++|||++++
T Consensus 117 ~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~ 195 (214)
T cd03297 117 DLLGLD-HLLNRYPAQLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEA 195 (214)
T ss_pred HHcCCH-hHhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHH
Confidence 888886 567888999999999999999999999999999999999999999999987743 388999999999999
Q ss_pred HhhcCeEEEEcCceeE
Q 006442 320 DQLCTKIVETEMGVSR 335 (645)
Q Consensus 320 ~~~~d~i~~l~~G~~~ 335 (645)
..+||+++++++|++.
T Consensus 196 ~~~~d~i~~l~~G~i~ 211 (214)
T cd03297 196 EYLADRIVVMEDGRLQ 211 (214)
T ss_pred HHhcCEEEEEECCEEE
Confidence 9999999999999863
No 285
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-40 Score=340.50 Aligned_cols=203 Identities=25% Similarity=0.341 Sum_probs=171.1
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc------------cc
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------PN 491 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------~~ 491 (645)
||+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 1 ml~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i~ 80 (271)
T PRK13638 1 MLATSDLWFRYQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVA 80 (271)
T ss_pred CeEEEEEEEEcCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhheE
Confidence 488999999998888999999999999999999999999999999999999999999999998752 12
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeE
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 565 (645)
|++|+.. ...+..++.+|+...... .. ...+..+++.+++ .+..++++.+||||||||++|||||+.+|++|
T Consensus 81 ~v~q~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-~~~~~~~~~~LSgG~~qrl~laraL~~~p~ll 158 (271)
T PRK13638 81 TVFQDPE-QQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDA-QHFRHQPIQCLSHGQKKRVAIAGALVLQARYL 158 (271)
T ss_pred EEeeChh-hccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-HhHhcCCchhCCHHHHHHHHHHHHHHcCCCEE
Confidence 4444321 122345788888653211 11 2346678999998 46678999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 566 lLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||||++||+.++..+.++|.++ +.|||+||||++++..+||++++|++|++.. .|..+++.
T Consensus 159 lLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 224 (271)
T PRK13638 159 LLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILT-HGAPGEVF 224 (271)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999865 4699999999999999999999999999985 46665553
No 286
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=338.22 Aligned_cols=210 Identities=23% Similarity=0.332 Sum_probs=170.5
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC---------
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN--------- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~--------- 160 (645)
.+.|+++|++++|+++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 19 ~~~l~i~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 19 APAMAAVNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred CcEEEEeeEEEEECCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 4579999999999988999999999999999999999999999999999999985 79999987632
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
..++|++|++.+++ .|+++|+...+... . ..........
T Consensus 99 ~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~--------------~------------------------~~~~~~~~~~ 139 (276)
T PRK14271 99 FRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH--------------K------------------------LVPRKEFRGV 139 (276)
T ss_pred HhhheEEeccCCccCC-ccHHHHHHHHHHhc--------------c------------------------CCCHHHHHHH
Confidence 25999999988765 89999985321100 0 0001112233
Q ss_pred HHhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006442 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (645)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (645)
+.++++.+|+.. +..++.+.+||||||||++|||||+.+|+||||||||++||+.+++++.++|++ .+.|||++|
T Consensus 140 ~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivs 219 (276)
T PRK14271 140 AQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVT 219 (276)
T ss_pred HHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 445666667642 235677899999999999999999999999999999999999999999988753 258999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
|+++++.++||+++++++|++. ..|...++
T Consensus 220 H~~~~~~~~~dri~~l~~G~i~-~~g~~~~~ 249 (276)
T PRK14271 220 HNLAQAARISDRAALFFDGRLV-EEGPTEQL 249 (276)
T ss_pred CCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999874 44554443
No 287
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=5.7e-40 Score=330.30 Aligned_cols=195 Identities=27% Similarity=0.397 Sum_probs=163.0
Q ss_pred cEEEEeEEEEeCC-------eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEc--CC--C-----
Q 006442 97 GVKLENISKSYKG-------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKA--KS--N----- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~-------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~--~~--~----- 160 (645)
+|+++|++++|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++ |. +
T Consensus 1 ml~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~ 80 (224)
T TIGR02324 1 LLEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQAS 80 (224)
T ss_pred CEEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcC
Confidence 3789999999962 469999999999999999999999999999999999999999999986 31 1
Q ss_pred ---------ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCC
Q 006442 161 ---------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN 231 (645)
Q Consensus 161 ---------~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (645)
..++|++|++.+++..|+.||+...+.. . ...
T Consensus 81 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~---------------~------------------------~~~ 121 (224)
T TIGR02324 81 PREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLE---------------R------------------------GVP 121 (224)
T ss_pred HHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHH---------------c------------------------CCC
Confidence 2599999999888889999998532100 0 000
Q ss_pred hhcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCe
Q 006442 232 LDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVP 308 (645)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~t 308 (645)
.....+++.++++.+|+.....++++.+||||||||++|||||+.+|++|||||||++||+.+++.+.++|++ .|+|
T Consensus 122 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~t 201 (224)
T TIGR02324 122 REAARARARELLARLNIPERLWHLPPATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAA 201 (224)
T ss_pred HHHHHHHHHHHHHHcCCchhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCE
Confidence 1112345567788888864455788999999999999999999999999999999999999999999988753 5899
Q ss_pred EEEEecCHHHHHhhcCeEEEEc
Q 006442 309 MVIISHDRAFLDQLCTKIVETE 330 (645)
Q Consensus 309 vIivsHd~~~l~~~~d~i~~l~ 330 (645)
||++||+.+++..+||+++.+.
T Consensus 202 ii~vsH~~~~~~~~~d~i~~~~ 223 (224)
T TIGR02324 202 LIGIFHDEEVRELVADRVMDVT 223 (224)
T ss_pred EEEEeCCHHHHHHhcceeEecC
Confidence 9999999999999999998763
No 288
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-40 Score=340.49 Aligned_cols=206 Identities=25% Similarity=0.393 Sum_probs=170.9
Q ss_pred ccEEEEeEEEEeC--CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceE
Q 006442 96 SGVKLENISKSYK--GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (645)
Q Consensus 96 ~~i~i~nls~~y~--~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i 163 (645)
.+|+++|++++|+ ++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..+
T Consensus 6 ~~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 6 VMIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred eEEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 4699999999995 4579999999999999999999999999999999999999999999987643 249
Q ss_pred EEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
+|++|++. .++..|++||+...... ..........++.++
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~---------------------------------------~~~~~~~~~~~~~~~ 126 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLEN---------------------------------------KKVPPKKMKDIIDDL 126 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHH---------------------------------------cCCCHHHHHHHHHHH
Confidence 99999984 45678999998532100 001111223456677
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---C-CCeEEEEecCHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---Q-DVPMVIISHDRAF 318 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~-g~tvIivsHd~~~ 318 (645)
++.+|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|++ . +.|||++||++++
T Consensus 127 l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~ 205 (271)
T PRK13632 127 AKKVGME-DYLDKEPQNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE 205 (271)
T ss_pred HHHcCCH-HHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH
Confidence 8888886 577888999999999999999999999999999999999999999999988753 3 5899999999999
Q ss_pred HHhhcCeEEEEcCceeEEeccChHH
Q 006442 319 LDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+. .||+++++++|++. ..|+..+
T Consensus 206 ~~-~~d~v~~l~~G~i~-~~g~~~~ 228 (271)
T PRK13632 206 AI-LADKVIVFSEGKLI-AQGKPKE 228 (271)
T ss_pred Hh-hCCEEEEEECCEEE-EecCHHH
Confidence 96 79999999999974 4455443
No 289
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-40 Score=333.57 Aligned_cols=201 Identities=27% Similarity=0.389 Sum_probs=172.0
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cchh
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (645)
.|+++|++++|+++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~~ 82 (241)
T PRK14250 3 EIEFKEVSYSSFGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGMV 82 (241)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEEE
Confidence 489999999998888999999999999999999999999999999999999999999999997652 2344
Q ss_pred ccchhhcCCCCCCHHHHHHhhhc--cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCC
Q 006442 494 EQNQAEALDLDKTVLETVAEAAE--DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~--~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt 571 (645)
+|+. .+. ..|+.+|+..... .....++.++++.+++..+..++++.+||||||||++|||||+.+|++|||||||
T Consensus 83 ~q~~--~~~-~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt 159 (241)
T PRK14250 83 FQQP--HLF-EGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDEPT 159 (241)
T ss_pred ecCc--hhc-hhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 5442 333 4699999875422 1223467788999999645678999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHH
Q 006442 572 NHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQV 628 (645)
Q Consensus 572 ~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~ 628 (645)
++||+.+++.+.+.|++. +.|||+||||++++.++||++++|++|++... +..+++
T Consensus 160 ~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~-~~~~~~ 219 (241)
T PRK14250 160 SALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEY-AKTYDF 219 (241)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEe-CCHHHH
Confidence 999999999999988764 56999999999999999999999999999864 444443
No 290
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-40 Score=340.77 Aligned_cols=205 Identities=27% Similarity=0.391 Sum_probs=175.1
Q ss_pred cEEEEEeeeeeeC-CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc------------
Q 006442 423 SVVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------ 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~-~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------ 489 (645)
++|+++|++++|+ ++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 4 ~~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 4 YILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred ceEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 4799999999996 577999999999999999999999999999999999999999999999998752
Q ss_pred cchhccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCC
Q 006442 490 PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (645)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 563 (645)
.+|++|+.... .+..|+.+|+...... .. ...+..+++.+|+. +..++++.+||||||||++|||||+.+|+
T Consensus 84 ig~v~q~~~~~-~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LS~G~~qrl~laraL~~~p~ 161 (283)
T PRK13636 84 VGMVFQDPDNQ-LFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIE-HLKDKPTHCLSFGQKKRVAIAGVLVMEPK 161 (283)
T ss_pred EEEEecCcchh-hccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 23555543222 2467999999764321 11 23577889999994 67899999999999999999999999999
Q ss_pred eEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 564 LLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 564 lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
+|||||||++||+.++..+.++|++. +.|||++|||++++..+|||+++|++|+++. .|+.+++..
T Consensus 162 lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~-~g~~~~~~~ 231 (283)
T PRK13636 162 VLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVIL-QGNPKEVFA 231 (283)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHHhc
Confidence 99999999999999999999988754 4699999999999999999999999999975 577776543
No 291
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-40 Score=336.59 Aligned_cols=203 Identities=30% Similarity=0.438 Sum_probs=174.5
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cchh
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (645)
+|+++|+++.|+++.+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (258)
T PRK13548 2 MLEARNLSVRLGGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAVL 81 (258)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEEE
Confidence 589999999999888999999999999999999999999999999999999999999999997642 2344
Q ss_pred ccchhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHc------cC
Q 006442 494 EQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV------KP 561 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~------~~ 561 (645)
+|+ ..+.+..|+.+|+...... .....+..+++.+++. +..++.+.+|||||||||+|||||+ .+
T Consensus 82 ~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGe~qrv~la~al~~~~~~~~~ 158 (258)
T PRK13548 82 PQH--SSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLA-HLAGRDYPQLSGGEQQRVQLARVLAQLWEPDGP 158 (258)
T ss_pred ccC--CcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCH-hHhcCCcccCCHHHHHHHHHHHHHhcccccCCC
Confidence 544 3455678999998764321 1123567889999994 6779999999999999999999999 59
Q ss_pred CCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 562 STLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 562 p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|++.. .+..+++.+
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~ 230 (258)
T PRK13548 159 PRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVA-DGTPAEVLT 230 (258)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEe-eCCHHHHhC
Confidence 9999999999999999999999988754 4599999999999999999999999999984 467766543
No 292
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=336.91 Aligned_cols=210 Identities=19% Similarity=0.274 Sum_probs=170.5
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC---------
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~--------- 160 (645)
..+|+++|++++|+++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 18 ~~~l~~~nl~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 97 (267)
T PRK14237 18 EIALSTKDLHVYYGKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVY 97 (267)
T ss_pred CeEEEEeeEEEEECCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChH
Confidence 346999999999988889999999999999999999999999999999999986 589999987642
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..|+|++|++.+++ .|+.||+...+... . .......+.
T Consensus 98 ~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~---------------~-----------------------~~~~~~~~~ 138 (267)
T PRK14237 98 EMRKHIGMVFQRPNPFA-KSIYENITFALERA---------------G-----------------------VKDKKVLDE 138 (267)
T ss_pred HHhcceEEEecCCcccc-ccHHHHHHhHHHhc---------------C-----------------------CCCHHHHHH
Confidence 25999999987765 69999985321100 0 000111233
Q ss_pred HHHhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006442 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (645)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (645)
++.++++.+++.. ...++++.+||||||||++|||||+.+|++|||||||++||+.++.++.++|++ .+.|||++
T Consensus 139 ~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~ 218 (267)
T PRK14237 139 IVETSLKQAALWDQVKDDLHKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIV 218 (267)
T ss_pred HHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 4455666666631 346788999999999999999999999999999999999999999999887753 46899999
Q ss_pred ecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
||+++++..+||+++++++|++. ..|+..++
T Consensus 219 tH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 249 (267)
T PRK14237 219 THNMQQAARASDYTAFFYLGDLI-EYDKTRNI 249 (267)
T ss_pred ecCHHHHHHhcCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999999999999984 44655443
No 293
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=334.03 Aligned_cols=209 Identities=19% Similarity=0.256 Sum_probs=169.0
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC---------
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN--------- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~--------- 160 (645)
.++|+++|++++|+++.+|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.+
T Consensus 2 ~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 2 KIKMESKNLNLWYGEKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred ccEEEEEEeEEEECCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 3579999999999888899999999999999999999999999999999999875 79999987643
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..++|++|++.++. .|+++|+...... ... ........
T Consensus 82 ~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~---------------~~~-----------------------~~~~~~~~ 122 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFP-MSIYDNVAYGPRI---------------HGI-----------------------KDKKELDK 122 (251)
T ss_pred HHHhheEEEecCCCcCC-CcHHHHHHhHHHh---------------cCC-----------------------CcHHHHHH
Confidence 24999999998765 8999998522100 000 00001122
Q ss_pred HHHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006442 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (645)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (645)
++.++++.+|+. ....++++.+||||||||++|||||+.+|+||||||||+|||+.++.++.++|++ .+.|||++
T Consensus 123 ~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiiv 202 (251)
T PRK14270 123 IVEWALKKAALWDEVKDDLKKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIV 202 (251)
T ss_pred HHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEE
Confidence 344556666653 1345778899999999999999999999999999999999999999999888753 26899999
Q ss_pred ecCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
||+++++..+||+++++++|++. ..|..++
T Consensus 203 sH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~ 232 (251)
T PRK14270 203 THNMQQASRVSDYTAFFLMGDLI-EFNKTEK 232 (251)
T ss_pred EcCHHHHHHhcCEEEEEECCeEE-EeCCHHH
Confidence 99999999999999999999984 4455443
No 294
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-40 Score=333.32 Aligned_cols=202 Identities=27% Similarity=0.442 Sum_probs=173.1
Q ss_pred EEEEeeeeeeCC-eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cchh
Q 006442 425 VTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (645)
Q Consensus 425 i~~~~v~~~y~~-~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (645)
++++|++++|++ +.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYV 80 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEE
Confidence 468999999987 78999999999999999999999999999999999999999999999997652 1344
Q ss_pred ccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCCh-hhhccCcCcCCHhHHHHHHHHHHHccCCCeEE
Q 006442 494 EQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKA-DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~-~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 566 (645)
+|+ ..+.+..|+.+|+...... . ..+.+.++++.+++.. ...++++.+|||||||||+|||||+.+|++||
T Consensus 81 ~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lll 158 (242)
T cd03295 81 IQQ--IGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLL 158 (242)
T ss_pred ccC--ccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 443 3456678999999764211 1 1235778899999963 36789999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 567 LDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 567 LDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||||++||+.++..+.+.|.+. +.|||+||||++++.++||++++|++|+++. .++.+++.
T Consensus 159 lDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 224 (242)
T cd03295 159 MDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQ-VGTPDEIL 224 (242)
T ss_pred ecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-ecCHHHHH
Confidence 99999999999999999998864 4699999999999999999999999999985 46666553
No 295
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-40 Score=347.12 Aligned_cols=205 Identities=21% Similarity=0.342 Sum_probs=173.4
Q ss_pred EEEEEeeeeeeC----CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC----CCeeEEEECceecc------
Q 006442 424 VVTIKNLEFGYE----DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK----PRGGEVLLGEHNVL------ 489 (645)
Q Consensus 424 ~i~~~~v~~~y~----~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~----p~~G~i~~~g~~~~------ 489 (645)
+|+++|+++.|+ ...+++++||+|.+||++||+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 689999999994 4579999999999999999999999999999999999996 58999999998752
Q ss_pred --------cchhccchhhcCCCCCCHHHHHHhhhc------c------ccHHHHHHHHhhcCCCh--hhhccCcCcCCHh
Q 006442 490 --------PNYFEQNQAEALDLDKTVLETVAEAAE------D------WRIDDIKGLLGRCNFKA--DMLDRKVSLLSGG 547 (645)
Q Consensus 490 --------~~~~~q~~~~~l~~~~tv~e~v~~~~~------~------~~~~~~~~~L~~~~l~~--~~~~~~~~~LSgG 547 (645)
.+|++|+....+.+..|+.+++..... . ....++.++|+.+|+.. +..++.+.+||||
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSgG 162 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEG 162 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHH
Confidence 235666654446677899998864211 0 11245788999999963 3468899999999
Q ss_pred HHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCC
Q 006442 548 EKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAG 623 (645)
Q Consensus 548 qkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~ 623 (645)
|||||+|||||+.+|+||||||||++||+.++..+.++|++. +.|||+||||++++.++||||++|++|+|++. |
T Consensus 163 ~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~ive~-g 241 (330)
T PRK15093 163 ECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQTVET-A 241 (330)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE-C
Confidence 999999999999999999999999999999999999998863 56999999999999999999999999999864 5
Q ss_pred ChhHHH
Q 006442 624 DYNQVQ 629 (645)
Q Consensus 624 ~~~~~~ 629 (645)
+.++++
T Consensus 242 ~~~~i~ 247 (330)
T PRK15093 242 PSKELV 247 (330)
T ss_pred CHHHHH
Confidence 555543
No 296
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=334.37 Aligned_cols=209 Identities=20% Similarity=0.308 Sum_probs=166.5
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCC-----ccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD-----SGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~-----~G~I~~~~~~----------- 160 (645)
+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 4 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 83 (252)
T PRK14272 4 LLSAQDVNIYYGDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAM 83 (252)
T ss_pred EEEEeeeEEEECCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHh
Confidence 589999999999888999999999999999999999999999999999999874 8999987632
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..++|++|++.+++..|+.||+...+... . . . ......+.+
T Consensus 84 ~~~i~~~~q~~~~~~~~t~~enl~~~~~~~-~--------------~-~----------------------~~~~~~~~~ 125 (252)
T PRK14272 84 RRRVGMVFQKPNPFPTMSVFDNVVAGLKLA-G--------------I-R----------------------DRDHLMEVA 125 (252)
T ss_pred hceeEEEeccCccCcCCCHHHHHHHHHHhc-C--------------C-C----------------------CHHHHHHHH
Confidence 25999999998877789999985322100 0 0 0 000011122
Q ss_pred HhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006442 240 SKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (645)
Q Consensus 240 ~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (645)
.+++..+++. ....++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .++|||++||
T Consensus 126 ~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH 205 (252)
T PRK14272 126 ERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTH 205 (252)
T ss_pred HHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 2233333321 1345677899999999999999999999999999999999999999999988753 3689999999
Q ss_pred CHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+++++..+||++++|++|++. ..|..++.
T Consensus 206 ~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 234 (252)
T PRK14272 206 NMHQAARVSDTTSFFLVGDLV-EHGPTDQL 234 (252)
T ss_pred CHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999999999974 55654443
No 297
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=5.4e-40 Score=344.98 Aligned_cols=195 Identities=23% Similarity=0.353 Sum_probs=168.9
Q ss_pred eeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------cchhccchhhcCC
Q 006442 432 FGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFEQNQAEALD 502 (645)
Q Consensus 432 ~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~~q~~~~~l~ 502 (645)
++|+++.+|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+ ..+.
T Consensus 1 k~y~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~--~~~~ 78 (302)
T TIGR01188 1 KVYGDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQY--ASVD 78 (302)
T ss_pred CeeCCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCC--CCCC
Confidence 3677788999999999999999999999999999999999999999999999998752 2455554 3566
Q ss_pred CCCCHHHHHHhhhccc------cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCH
Q 006442 503 LDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 576 (645)
Q Consensus 503 ~~~tv~e~v~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~ 576 (645)
+.+|+.+|+....... ....+.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||+|||+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELG-EAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 7789999997643211 123577899999995 667999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 577 PSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 577 ~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
.++..+.+.|+++ +.|||++|||++++.++||+|++|++|+++. .|+.+++.+
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~l~~ 213 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIA-EGTPEELKR 213 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEE-ECCHHHHHH
Confidence 9999999999865 4699999999999999999999999999985 577777654
No 298
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1e-39 Score=333.38 Aligned_cols=203 Identities=27% Similarity=0.394 Sum_probs=173.1
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC-----eeEEEECceecc---------
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR-----GGEVLLGEHNVL--------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~-----~G~i~~~g~~~~--------- 489 (645)
+|+++|++++|+++.+++++||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~ 80 (247)
T TIGR00972 1 AIEIENLNLFYGEKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVEL 80 (247)
T ss_pred CEEEEEEEEEECCeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHH
Confidence 478999999999888999999999999999999999999999999999999998 999999998753
Q ss_pred ---cchhccchhhcCCCCCCHHHHHHhhhccc-------cHHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHHHH
Q 006442 490 ---PNYFEQNQAEALDLDKTVLETVAEAAEDW-------RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCK 556 (645)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~v~~~~~~~-------~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~lAr 556 (645)
.+|++|+ ..+.+ .|+.+|+....... ....+..+++.+++.. +..++++.+|||||||||+|||
T Consensus 81 ~~~i~~v~q~--~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~lar 157 (247)
T TIGR00972 81 RRRVGMVFQK--PNPFP-MSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCIAR 157 (247)
T ss_pred HhheEEEecC--cccCC-CCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHHHH
Confidence 1234443 33445 89999997643211 1235678899999952 4578899999999999999999
Q ss_pred HHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
||+.+|++|||||||++||+.++..+.++|+++. .|||+||||++++.++||++++|++|++.. .++.+++..
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~ 232 (247)
T TIGR00972 158 ALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVE-YGPTEQIFT 232 (247)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHHHh
Confidence 9999999999999999999999999999998653 699999999999999999999999999985 466666543
No 299
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-40 Score=376.45 Aligned_cols=206 Identities=30% Similarity=0.502 Sum_probs=177.5
Q ss_pred CCccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccC--c
Q 006442 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEF--E 171 (645)
Q Consensus 94 ~~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~--~ 171 (645)
...+|+++|++++|+++.+|+|+||+|++|+++||+|||||||||||++|+|+++|++|+|.+++ ..+|||++|++ .
T Consensus 309 ~~~~l~~~~l~~~y~~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~-~~~igy~~Q~~~~~ 387 (638)
T PRK10636 309 PNPLLKMEKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAK-GIKLGYFAQHQLEF 387 (638)
T ss_pred CCceEEEEeeEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECC-CEEEEEecCcchhh
Confidence 34579999999999988899999999999999999999999999999999999999999999863 45899999974 2
Q ss_pred cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcc
Q 006442 172 VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTAD 251 (645)
Q Consensus 172 ~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~ 251 (645)
+....|+.+++... .....+.++.++|..+++...
T Consensus 388 l~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~L~~~~l~~~ 422 (638)
T PRK10636 388 LRADESPLQHLARL---------------------------------------------APQELEQKLRDYLGGFGFQGD 422 (638)
T ss_pred CCccchHHHHHHHh---------------------------------------------CchhhHHHHHHHHHHcCCChh
Confidence 33344555543200 000113456678888999655
Q ss_pred cccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcC
Q 006442 252 DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEM 331 (645)
Q Consensus 252 ~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~i~~l~~ 331 (645)
..++++.+|||||||||+|||+|+.+|+||||||||||||+.+++.|.++|++.+.|||+||||++++..+||+|+++++
T Consensus 423 ~~~~~~~~LSgGekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~gtvi~vSHd~~~~~~~~d~i~~l~~ 502 (638)
T PRK10636 423 KVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGALVVVSHDRHLLRSTTDDLYLVHD 502 (638)
T ss_pred HhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHhCCEEEEEEC
Confidence 67899999999999999999999999999999999999999999999999988778999999999999999999999999
Q ss_pred ceeEEeccChHHHH
Q 006442 332 GVSRTYEGNYSQYV 345 (645)
Q Consensus 332 G~~~~~~g~~~~~~ 345 (645)
|++..|.|+|++|.
T Consensus 503 G~i~~~~g~~~~~~ 516 (638)
T PRK10636 503 GKVEPFDGDLEDYQ 516 (638)
T ss_pred CEEEEcCCCHHHHH
Confidence 99877999999884
No 300
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.2e-39 Score=371.47 Aligned_cols=207 Identities=25% Similarity=0.421 Sum_probs=179.6
Q ss_pred CCCcEEEEEeeeeeeCCe--eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------
Q 006442 420 SGRSVVTIKNLEFGYEDR--LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------- 489 (645)
Q Consensus 420 ~~~~~i~~~~v~~~y~~~--~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------- 489 (645)
.-.+-|+++||+|+|+.. ++|+|+||+|++||++||+|+||||||||+|+|.|+++|++|+|.+||.|+.
T Consensus 467 ~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR 546 (709)
T COG2274 467 KLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLR 546 (709)
T ss_pred ccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHH
Confidence 345569999999999754 6999999999999999999999999999999999999999999999999863
Q ss_pred --cchhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhh----------hccCcCcCCHhHHHHHHHHHH
Q 006442 490 --PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADM----------LDRKVSLLSGGEKARLAFCKF 557 (645)
Q Consensus 490 --~~~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~----------~~~~~~~LSgGqkqrv~lAra 557 (645)
.+|+.|+ ...++.|+.||+..+....+.+++.+++...|..... .......||||||||++||||
T Consensus 547 ~~ig~V~Q~---~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARa 623 (709)
T COG2274 547 RQVGYVLQD---PFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARA 623 (709)
T ss_pred hheeEEccc---chhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHH
Confidence 2455554 3457899999999988877777777777776664222 134456899999999999999
Q ss_pred HccCCCeEEeeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 558 l~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
|+++|+|||||||||+||+++++.+.+.|.+.. .|+|+|||++.++.. ||||++|++|++++ .|+.+++++.
T Consensus 624 Ll~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~-adrIiVl~~Gkiv~-~gs~~ell~~ 697 (709)
T COG2274 624 LLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRS-ADRIIVLDQGKIVE-QGSHEELLAQ 697 (709)
T ss_pred hccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhh-ccEEEEccCCceec-cCCHHHHHHh
Confidence 999999999999999999999999999999875 799999999999976 99999999999996 6888888765
No 301
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=8.5e-40 Score=335.19 Aligned_cols=206 Identities=22% Similarity=0.315 Sum_probs=171.9
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECcee-----cc--------
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHN-----VL-------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~-----~~-------- 489 (645)
++|+++|+++.|+++.+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ +.
T Consensus 2 ~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (253)
T TIGR02323 2 PLLQVSGLSKSYGGGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAERR 81 (253)
T ss_pred ceEEEeeeEEEeCCceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHHH
Confidence 47999999999988889999999999999999999999999999999999999999999998865 31
Q ss_pred ------cchhccchhhcCCCCCCHHHHHHhhh---c--c--ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHH
Q 006442 490 ------PNYFEQNQAEALDLDKTVLETVAEAA---E--D--WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCK 556 (645)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~v~~~~---~--~--~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAr 556 (645)
.+|+.|.....+.+..++.+|+.... . . .....+.++++.+++.....++.+..|||||||||+|||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv~lar 161 (253)
T TIGR02323 82 RLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRLQIAR 161 (253)
T ss_pred HhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCchhcCHHHHHHHHHHH
Confidence 13444442222345568888875321 1 1 113457788999999545678999999999999999999
Q ss_pred HHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||+.+|++|||||||++||+.+++.+.+.|.+. +.|||+||||++++..+||++++|++|+++. .++.+++.
T Consensus 162 al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~-~~~~~~~~ 237 (253)
T TIGR02323 162 NLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVE-SGLTDQVL 237 (253)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE-ECCHHHHh
Confidence 999999999999999999999999999988753 5699999999999999999999999999985 45655554
No 302
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-40 Score=335.60 Aligned_cols=202 Identities=30% Similarity=0.459 Sum_probs=173.8
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cchh
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (645)
+|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 81 (255)
T PRK11231 2 TLRTENLTVGYGTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLALL 81 (255)
T ss_pred EEEEEeEEEEECCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEEe
Confidence 589999999999889999999999999999999999999999999999999999999999997642 2344
Q ss_pred ccchhhcCCCCCCHHHHHHhhhc----------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCC
Q 006442 494 EQNQAEALDLDKTVLETVAEAAE----------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~----------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 563 (645)
+|+ ..+.+..|+.+|+..... ......+..+++.+++. +..++++.+|||||||||+||||++.+|+
T Consensus 82 ~q~--~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~ 158 (255)
T PRK11231 82 PQH--HLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRIN-HLADRRLTDLSGGQRQRAFLAMVLAQDTP 158 (255)
T ss_pred ccc--CCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCH-HHHcCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 444 234556799999876421 01123567889999994 66799999999999999999999999999
Q ss_pred eEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 564 lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+|||||||++||+.++..+.+.|++. +.|||++|||++++.++||++++|++|++.. .++.+++.
T Consensus 159 llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 226 (255)
T PRK11231 159 VVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMA-QGTPEEVM 226 (255)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEE-EcCHHHhc
Confidence 99999999999999999999999764 4699999999999999999999999999974 46666653
No 303
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=338.04 Aligned_cols=208 Identities=19% Similarity=0.302 Sum_probs=169.0
Q ss_pred CCccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC--------
Q 006442 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN-------- 160 (645)
Q Consensus 94 ~~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~-------- 160 (645)
..++|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|..
T Consensus 36 ~~~~l~i~~l~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 36 GETVIEARDLNVFYGDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred CCceEEEEEEEEEECCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 4567999999999988889999999999999999999999999999999999987 689999987632
Q ss_pred ----ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHH
Q 006442 161 ----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (645)
Q Consensus 161 ----~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (645)
..++|++|++.+++ .|+.||+...... . ... ....
T Consensus 116 ~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~---------------~------------------------~~~-~~~~ 154 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFP-KSIYDNVAYGLKI---------------Q------------------------GYD-GDID 154 (285)
T ss_pred HhhhccEEEEecCCccCc-CCHHHHHHHHHHH---------------c------------------------CCc-HHHH
Confidence 25999999987765 4999998532110 0 000 0112
Q ss_pred HHHHhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEE
Q 006442 237 AKVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVI 311 (645)
Q Consensus 237 ~~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIi 311 (645)
.++.++++.+|+.. +..++++.+|||||||||+|||||+.+|+||||||||+|||+.+++++.++|++ .+.|||+
T Consensus 155 ~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii 234 (285)
T PRK14254 155 ERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVI 234 (285)
T ss_pred HHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEE
Confidence 34556666777642 356788999999999999999999999999999999999999999999988754 2579999
Q ss_pred EecCHHHHHhhcCeEE-EEcCceeEEeccChHH
Q 006442 312 ISHDRAFLDQLCTKIV-ETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 312 vsHd~~~l~~~~d~i~-~l~~G~~~~~~g~~~~ 343 (645)
+||+++++..+||+++ ++++|++. ..|...+
T Consensus 235 ~tH~~~~i~~~~dri~v~l~~G~i~-~~g~~~~ 266 (285)
T PRK14254 235 VTHNMQQAARISDKTAVFLTGGELV-EFDDTDK 266 (285)
T ss_pred EeCCHHHHHhhcCEEEEEeeCCEEE-EeCCHHH
Confidence 9999999999999975 57999884 3455443
No 304
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-40 Score=330.59 Aligned_cols=194 Identities=28% Similarity=0.435 Sum_probs=167.1
Q ss_pred cEEEEEeeeeeeCC----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------
Q 006442 423 SVVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------- 489 (645)
++|+++|+++.|++ +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~ 83 (233)
T PRK11629 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAE 83 (233)
T ss_pred ceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHH
Confidence 47999999999974 57999999999999999999999999999999999999999999999997652
Q ss_pred -----cchhccchhhcCCCCCCHHHHHHhhhc--c----ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHH
Q 006442 490 -----PNYFEQNQAEALDLDKTVLETVAEAAE--D----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (645)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~v~~~~~--~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral 558 (645)
.+|++|+ ..+++..|+.+|+..... . ...+++.++++.+|+. +..++++.+||||||||++||||+
T Consensus 84 ~~~~~i~~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qrl~la~al 160 (233)
T PRK11629 84 LRNQKLGFIYQF--HHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLE-HRANHRPSELSGGERQRVAIARAL 160 (233)
T ss_pred HHhccEEEEecC--cccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHHHH
Confidence 1244443 345567899999976321 1 1124577899999995 667899999999999999999999
Q ss_pred ccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.. +|++++|++|+++.
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~-~~~~~~l~~G~i~~ 225 (233)
T PRK11629 161 VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKR-MSRQLEMRDGRLTA 225 (233)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHh-hCEEEEEECCEEEE
Confidence 9999999999999999999999999999864 4599999999999987 47999999999975
No 305
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-40 Score=340.71 Aligned_cols=207 Identities=22% Similarity=0.324 Sum_probs=171.5
Q ss_pred ccEEEEeEEEEeCC------eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------
Q 006442 96 SGVKLENISKSYKG------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------- 160 (645)
.+|+++|++++|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 46999999999963 469999999999999999999999999999999999999999999998632
Q ss_pred --ceEEEEeccCcc-CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 --MKIAFLSQEFEV-SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 --~~i~~v~Q~~~~-~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..++|++|++.. ++..|+.+|+...... ........++
T Consensus 83 ~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~---------------------------------------~~~~~~~~~~ 123 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIVATIVEEDVAFGPEN---------------------------------------LGIPPEEIRE 123 (280)
T ss_pred HhhheEEEecChhhhhccccHHHHHHhhHhh---------------------------------------cCCCHHHHHH
Confidence 248999999742 2346898887522100 0011122344
Q ss_pred HHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEe
Q 006442 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIIS 313 (645)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivs 313 (645)
++.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .|.|||++|
T Consensus 124 ~~~~~l~~~gL~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvt 202 (280)
T PRK13633 124 RVDESLKKVGMY-EYRRHAPHLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILIT 202 (280)
T ss_pred HHHHHHHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 567788888986 678899999999999999999999999999999999999999999999888743 489999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
||++++.. ||+++++++|++. ..|+..++
T Consensus 203 H~~~~~~~-~d~v~~l~~G~i~-~~g~~~~~ 231 (280)
T PRK13633 203 HYMEEAVE-ADRIIVMDSGKVV-MEGTPKEI 231 (280)
T ss_pred cChHHHhc-CCEEEEEECCEEE-EecCHHHH
Confidence 99999986 9999999999873 55665544
No 306
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5e-40 Score=326.09 Aligned_cols=190 Identities=23% Similarity=0.344 Sum_probs=163.4
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEEe
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLS 167 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v~ 167 (645)
+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~~~ 80 (204)
T PRK13538 1 MLEARNLACERDERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLYLG 80 (204)
T ss_pred CeEEEEEEEEECCEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEEeC
Confidence 3789999999998889999999999999999999999999999999999999999999998643 2599999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcC
Q 006442 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (645)
Q Consensus 168 Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (645)
|++.+++..|+.||+...... . . ....+++.++++.+|
T Consensus 81 ~~~~~~~~~tv~e~l~~~~~~---------------~--------------------------~-~~~~~~~~~~l~~~g 118 (204)
T PRK13538 81 HQPGIKTELTALENLRFYQRL---------------H--------------------------G-PGDDEALWEALAQVG 118 (204)
T ss_pred CccccCcCCcHHHHHHHHHHh---------------c--------------------------C-ccHHHHHHHHHHHcC
Confidence 998887788999998532100 0 0 011234567788888
Q ss_pred CCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcC
Q 006442 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d 324 (645)
+. +..++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++|||++++..+.+
T Consensus 119 l~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~ 197 (204)
T PRK13538 119 LA-GFEDVPVRQLSAGQQRRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKV 197 (204)
T ss_pred CH-HHhhCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCc
Confidence 85 467888999999999999999999999999999999999999999999988753 48899999999999999888
Q ss_pred eEEEE
Q 006442 325 KIVET 329 (645)
Q Consensus 325 ~i~~l 329 (645)
|++.+
T Consensus 198 ~~~~~ 202 (204)
T PRK13538 198 RKLRL 202 (204)
T ss_pred eEEec
Confidence 88776
No 307
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=7.4e-40 Score=334.79 Aligned_cols=198 Identities=27% Similarity=0.388 Sum_probs=164.6
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCccCCC
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMS 175 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~ 175 (645)
++|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++ ...++|++|++.++..
T Consensus 3 ~~l~~~~l~~~~~~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-~~~i~~v~q~~~~~~~ 81 (251)
T PRK09544 3 SLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-KLRIGYVPQKLYLDTT 81 (251)
T ss_pred cEEEEeceEEEECCceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-ccCEEEeccccccccc
Confidence 369999999999988899999999999999999999999999999999999999999999986 3479999999866544
Q ss_pred --CCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcccc
Q 006442 176 --RTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDG 253 (645)
Q Consensus 176 --~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~ 253 (645)
.|+.+++... . ...++++.++++.+|+. +..
T Consensus 82 l~~~~~~~~~~~--~--------------------------------------------~~~~~~~~~~l~~~gl~-~~~ 114 (251)
T PRK09544 82 LPLTVNRFLRLR--P--------------------------------------------GTKKEDILPALKRVQAG-HLI 114 (251)
T ss_pred cChhHHHHHhcc--c--------------------------------------------cccHHHHHHHHHHcCCh-HHH
Confidence 3555543210 0 00012345567777875 567
Q ss_pred cccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEEEE
Q 006442 254 DRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIVET 329 (645)
Q Consensus 254 ~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~i~~l 329 (645)
++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||++||+++++..+||+|+++
T Consensus 115 ~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l 194 (251)
T PRK09544 115 DAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCL 194 (251)
T ss_pred hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEE
Confidence 888999999999999999999999999999999999999999999888742 3899999999999999999999999
Q ss_pred cCceeEEeccChHH
Q 006442 330 EMGVSRTYEGNYSQ 343 (645)
Q Consensus 330 ~~G~~~~~~g~~~~ 343 (645)
++ ++ ...|..++
T Consensus 195 ~~-~i-~~~g~~~~ 206 (251)
T PRK09544 195 NH-HI-CCSGTPEV 206 (251)
T ss_pred CC-ce-EeeCCHHH
Confidence 75 44 35565444
No 308
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=9.3e-40 Score=331.66 Aligned_cols=205 Identities=32% Similarity=0.483 Sum_probs=172.0
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------ceEEEEecc
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------MKIAFLSQE 169 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------~~i~~v~Q~ 169 (645)
|+++|++++|+++++|+|+||+|.+|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|++|+
T Consensus 1 i~i~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q~ 80 (237)
T TIGR00968 1 IEIANISKRFGSFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQH 80 (237)
T ss_pred CEEEEEEEEECCeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEecC
Confidence 478999999998889999999999999999999999999999999999999999999987643 359999999
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCC
Q 006442 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (645)
Q Consensus 170 ~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (645)
+.+++..|+.||+...... . ........+.+.++++.+++.
T Consensus 81 ~~~~~~~t~~enl~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l~ 121 (237)
T TIGR00968 81 YALFKHLTVRDNIAFGLEI---------------R------------------------KHPKAKIKARVEELLELVQLE 121 (237)
T ss_pred hhhccCCcHHHHHHhHHHh---------------c------------------------CCCHHHHHHHHHHHHHHcCCH
Confidence 9887778999998532100 0 000011123455677788885
Q ss_pred cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCe
Q 006442 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTK 325 (645)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~ 325 (645)
+..++.+.+|||||+||++|||||+.+|+++||||||+|||+.+++++.++|++ .++|||++||+++++..+||+
T Consensus 122 -~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~ 200 (237)
T TIGR00968 122 -GLGDRYPNQLSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADR 200 (237)
T ss_pred -hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCE
Confidence 567888999999999999999999999999999999999999999999988753 379999999999999999999
Q ss_pred EEEEcCceeEEeccChHH
Q 006442 326 IVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 326 i~~l~~G~~~~~~g~~~~ 343 (645)
++++++|++. ..|..+.
T Consensus 201 i~~l~~g~i~-~~~~~~~ 217 (237)
T TIGR00968 201 IVVMSNGKIE-QIGSPDE 217 (237)
T ss_pred EEEEECCEEE-EecCHHH
Confidence 9999999984 4455443
No 309
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=5.9e-40 Score=329.50 Aligned_cols=192 Identities=31% Similarity=0.497 Sum_probs=164.6
Q ss_pred EEEEEeeeeeeCC----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------
Q 006442 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (645)
+|+++|+++.|++ +++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (221)
T TIGR02211 1 LLKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKL 80 (221)
T ss_pred CEEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHH
Confidence 3789999999974 57999999999999999999999999999999999999999999999997652
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhc--cc----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHc
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAE--DW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~--~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~ 559 (645)
.+|++|+ ..+++..|+.+|+..... .. ....+.++++.+++. +..++++.+|||||||||+|||||+
T Consensus 81 ~~~~i~~v~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~ 157 (221)
T TIGR02211 81 RNKKLGFIYQF--HHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLE-HRINHRPSELSGGERQRVAIARALV 157 (221)
T ss_pred HHhcEEEEecc--cccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHh
Confidence 1233443 345567899999976321 11 123567899999995 6678999999999999999999999
Q ss_pred cCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEE
Q 006442 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQ 619 (645)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~ 619 (645)
.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.. ||++++|++|+++
T Consensus 158 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 158 NQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 999999999999999999999999999754 4699999999999965 7999999999875
No 310
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4.2e-40 Score=352.74 Aligned_cols=203 Identities=24% Similarity=0.328 Sum_probs=172.6
Q ss_pred EeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCC----C--------------ce
Q 006442 101 ENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKS----N--------------MK 162 (645)
Q Consensus 101 ~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~----~--------------~~ 162 (645)
.++.++|+...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. . .+
T Consensus 28 ~~~~~~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~ 107 (382)
T TIGR03415 28 EEILDETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHR 107 (382)
T ss_pred HHHHHhhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCC
Confidence 45677888888999999999999999999999999999999999999999999999873 1 25
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
|+|++|++.+++..||.||+...+.. ..++......++.++
T Consensus 108 i~~vfQ~~~l~p~~Tv~eNi~~~~~~---------------------------------------~g~~~~~~~~~a~e~ 148 (382)
T TIGR03415 108 VSMVFQKFALMPWLTVEENVAFGLEM---------------------------------------QGMPEAERRKRVDEQ 148 (382)
T ss_pred EEEEECCCcCCCCCcHHHHHHHHHHh---------------------------------------cCCCHHHHHHHHHHH
Confidence 99999999998889999998632110 001111233466778
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAF 318 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~ 318 (645)
++.+|+. +..++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.+.|. +.++|||+||||+++
T Consensus 149 le~vgL~-~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e 227 (382)
T TIGR03415 149 LELVGLA-QWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDE 227 (382)
T ss_pred HHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 8899996 67889999999999999999999999999999999999999999999988764 248999999999999
Q ss_pred HHhhcCeEEEEcCceeEEeccChHHH
Q 006442 319 LDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+.++||+|++|++|++. ..|+.++.
T Consensus 228 ~~~l~DrI~vl~~G~iv-~~g~~~ei 252 (382)
T TIGR03415 228 ALKIGNRIAIMEGGRII-QHGTPEEI 252 (382)
T ss_pred HHHhCCEEEEEECCEEE-EecCHHHH
Confidence 99999999999999984 45665544
No 311
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=333.23 Aligned_cols=207 Identities=19% Similarity=0.279 Sum_probs=165.3
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCC-----ccEEEEcCCC----------
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD-----SGNVIKAKSN---------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~-----~G~I~~~~~~---------- 160 (645)
+.|+++|++|+|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 3 ~~l~~~~l~~~~~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~ 82 (251)
T PRK14249 3 PKIKIRGVNFFYHKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVN 82 (251)
T ss_pred ceEEEEEEEEEECCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHH
Confidence 4699999999998888999999999999999999999999999999999999997 6999987632
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
..++|++|++.+++ .|+.||+....... ... .....++.
T Consensus 83 ~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---------------~~~-----------------------~~~~~~~~ 123 (251)
T PRK14249 83 LRKRVGMVFQQPNPFP-KSIFDNVAFGPRML---------------GTT-----------------------AQSRLDEV 123 (251)
T ss_pred hhceEEEEecCCccCc-CcHHHHHhhHHHhc---------------CCC-----------------------hhhHHHHH
Confidence 25999999998765 59999985321000 000 00001122
Q ss_pred HHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006442 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (645)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (645)
+.+++..+|+. ....++.+.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|++ .+.|||++|
T Consensus 124 ~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivs 203 (251)
T PRK14249 124 VEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVT 203 (251)
T ss_pred HHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 23333444432 1345778999999999999999999999999999999999999999999888753 478999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYS 342 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~ 342 (645)
|+++++..+||+++++++|++. ..|...
T Consensus 204 h~~~~~~~~~d~i~~l~~G~i~-~~~~~~ 231 (251)
T PRK14249 204 HNMQQAARASDWTGFLLTGDLV-EYGRTG 231 (251)
T ss_pred CCHHHHHhhCCEEEEEeCCeEE-EeCCHH
Confidence 9999999999999999999984 445543
No 312
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.2e-39 Score=369.51 Aligned_cols=212 Identities=34% Similarity=0.530 Sum_probs=180.7
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccC-ccC
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEF-EVS 173 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~-~~~ 173 (645)
.++|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++ ....|||++|++ .++
T Consensus 322 ~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~-~~~~i~~v~q~~~~~~ 400 (556)
T PRK11819 322 DKVIEAENLSKSFGDRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIG-ETVKLAYVDQSRDALD 400 (556)
T ss_pred CeEEEEEeEEEEECCeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEC-CceEEEEEeCchhhcC
Confidence 457999999999998889999999999999999999999999999999999999999999985 456899999997 566
Q ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcccc
Q 006442 174 MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDG 253 (645)
Q Consensus 174 ~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~ 253 (645)
+..||.+|+....... ..... +..+..++..+|+.....
T Consensus 401 ~~~tv~e~l~~~~~~~---------------------------------------~~~~~--~~~~~~~l~~~~l~~~~~ 439 (556)
T PRK11819 401 PNKTVWEEISGGLDII---------------------------------------KVGNR--EIPSRAYVGRFNFKGGDQ 439 (556)
T ss_pred CCCCHHHHHHhhcccc---------------------------------------ccccc--HHHHHHHHHhCCCChhHh
Confidence 7789999985321000 00000 112335678889864457
Q ss_pred cccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcC-c
Q 006442 254 DRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEM-G 332 (645)
Q Consensus 254 ~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~i~~l~~-G 332 (645)
++++.+|||||||||+|||||+.+|++|||||||+|||+.++.+|.++|++...|||+||||++++..+||+|+++++ |
T Consensus 440 ~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vtHd~~~~~~~~d~i~~l~~~g 519 (556)
T PRK11819 440 QKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFPGCAVVISHDRWFLDRIATHILAFEGDS 519 (556)
T ss_pred cCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhCCEEEEEECCC
Confidence 889999999999999999999999999999999999999999999999987766999999999999999999999985 7
Q ss_pred eeEEeccChHHHHHHH
Q 006442 333 VSRTYEGNYSQYVLEK 348 (645)
Q Consensus 333 ~~~~~~g~~~~~~~~~ 348 (645)
++..+.|+|++|....
T Consensus 520 ~~~~~~g~~~~~~~~~ 535 (556)
T PRK11819 520 QVEWFEGNFQEYEEDK 535 (556)
T ss_pred eEEEecCCHHHHHHHH
Confidence 8878899998876553
No 313
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=332.22 Aligned_cols=203 Identities=22% Similarity=0.371 Sum_probs=174.2
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------cch
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNY 492 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~~ 492 (645)
+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 3 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 82 (241)
T PRK10895 3 TLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGY 82 (241)
T ss_pred eEEEeCcEEEeCCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeEE
Confidence 689999999999889999999999999999999999999999999999999999999999997652 124
Q ss_pred hccchhhcCCCCCCHHHHHHhhhcc-------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeE
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAED-------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~~-------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 565 (645)
++|+ ..+....|+.+|+...... .....+.++++.+++. +..++++.+|||||||||+|||||+.+|++|
T Consensus 83 ~~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~ll 159 (241)
T PRK10895 83 LPQE--ASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIE-HLRDSMGQSLSGGERRRVEIARALAANPKFI 159 (241)
T ss_pred eccC--CcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCH-HHhhcchhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 4443 3455668999998764211 1123577889999994 5678999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 566 lLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
||||||++||+.++..+.+.+.++ +.|||++|||++++..+||++++|++|+++. .++++++..
T Consensus 160 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~~ 226 (241)
T PRK10895 160 LLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIA-HGTPTEILQ 226 (241)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEe-eCCHHHHhc
Confidence 999999999999999998888753 5699999999999999999999999999985 577777643
No 314
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=336.43 Aligned_cols=205 Identities=28% Similarity=0.402 Sum_probs=176.1
Q ss_pred CCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------c
Q 006442 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~ 490 (645)
+..+|+++|++++|+++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 4 ~~~~l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 4 SVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cccEEEEEEEEEEECCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 345799999999999888999999999999999999999999999999999999999999999998652 2
Q ss_pred chhccchhhcCCCCCCHHHHHHhhh-c---------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHcc
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAA-E---------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~-~---------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~ 560 (645)
+|++|+ ..+.+..|+.+|+.... . ......+..+++.+++. +..++++.+||||||||++||||++.
T Consensus 84 ~~v~q~--~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrv~laral~~ 160 (265)
T PRK10253 84 GLLAQN--ATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGIT-HLADQSVDTLSGGQRQRAWIAMVLAQ 160 (265)
T ss_pred EEeecc--CcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCH-HHhcCCcccCChHHHHHHHHHHHHhc
Confidence 344554 34556789999987531 1 01123567889999994 67799999999999999999999999
Q ss_pred CCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 561 ~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++.++||++++|++|+++. .|..+++.
T Consensus 161 ~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 232 (265)
T PRK10253 161 ETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVA-QGAPKEIV 232 (265)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 99999999999999999999999999764 4599999999999999999999999999985 46666654
No 315
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-40 Score=326.12 Aligned_cols=191 Identities=32% Similarity=0.482 Sum_probs=165.8
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhccc
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~q~ 496 (645)
|+++|++++|+++.. ++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 i~~~~l~~~~~~~~~--~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 78 (211)
T cd03298 1 VRLDKIRFSYGEQPM--HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQE 78 (211)
T ss_pred CEEEeEEEEeCCEec--ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEecc
Confidence 478999999986543 999999999999999999999999999999999999999999998752 2455554
Q ss_pred hhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCC
Q 006442 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (645)
Q Consensus 497 ~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 570 (645)
..+++..|+.+|+...... ....++.++++.+++. +..++++.+||||||||++|||||+.+|++||||||
T Consensus 79 --~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~ia~al~~~p~llllDEP 155 (211)
T cd03298 79 --NNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLA-GLEKRLPGELSGGERQRVALARVLVRDKPVLLLDEP 155 (211)
T ss_pred --cccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCH-HHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3455678999999754321 1234578899999994 667899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 571 t~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
|++||+.++..+.+.|+++ +.|||+||||++++.++|||+++|++|++..
T Consensus 156 ~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 209 (211)
T cd03298 156 FAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAA 209 (211)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEee
Confidence 9999999999999999754 4699999999999999999999999999874
No 316
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-40 Score=337.93 Aligned_cols=207 Identities=24% Similarity=0.404 Sum_probs=171.2
Q ss_pred ccEEEEeEEEEeCC--eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceE
Q 006442 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (645)
Q Consensus 96 ~~i~i~nls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i 163 (645)
++|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..+
T Consensus 6 ~~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 6 SIIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred ceEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 46999999999975 359999999999999999999999999999999999999999999998743 259
Q ss_pred EEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
+|++|++. .++..|+.+|+....... ........+++.++
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~ 126 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENH---------------------------------------AVPYDEMHRRVSEA 126 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhc---------------------------------------CCCHHHHHHHHHHH
Confidence 99999985 556778988874321000 00111123345677
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAF 318 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~ 318 (645)
++.+|+. +..++.+.+||||||||++|||||+.+|++|||||||++||+.++..+.++|++ .|.|||++||++++
T Consensus 127 l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~ 205 (269)
T PRK13648 127 LKQVDML-ERADYEPNALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSE 205 (269)
T ss_pred HHHcCCc-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchH
Confidence 8888886 577888999999999999999999999999999999999999999999887753 48899999999999
Q ss_pred HHhhcCeEEEEcCceeEEeccChHHH
Q 006442 319 LDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+.. ||+|+++++|++. ..|..+++
T Consensus 206 ~~~-~d~i~~l~~G~i~-~~g~~~~~ 229 (269)
T PRK13648 206 AME-ADHVIVMNKGTVY-KEGTPTEI 229 (269)
T ss_pred Hhc-CCEEEEEECCEEE-EecCHHHH
Confidence 986 9999999999984 45655443
No 317
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-40 Score=340.51 Aligned_cols=207 Identities=23% Similarity=0.366 Sum_probs=172.5
Q ss_pred ccEEEEeEEEEeCC--eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCc---cEEEEcCCC----------
Q 006442 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDS---GNVIKAKSN---------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~---G~I~~~~~~---------- 160 (645)
.+|+++|++|+|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++ |+|.++|..
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 36999999999965 469999999999999999999999999999999999999987 899987743
Q ss_pred ceEEEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 MKIAFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 ~~i~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..|+|++|++. .++..||+||+...... .........+++
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~---------------------------------------~~~~~~~~~~~~ 124 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLEN---------------------------------------RAVPRPEMIKIV 124 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHh---------------------------------------CCCCHHHHHHHH
Confidence 25999999985 45678999998521100 001112234456
Q ss_pred HhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecC
Q 006442 240 SKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHD 315 (645)
Q Consensus 240 ~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd 315 (645)
.++++.+|+. +..++++.+|||||+||++|||||+.+|++|||||||+|||+.++..+.++|++ .|+|||++||+
T Consensus 125 ~~~l~~~~L~-~~~~~~~~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~ 203 (282)
T PRK13640 125 RDVLADVGML-DYIDSEPANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHD 203 (282)
T ss_pred HHHHHHCCCh-hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC
Confidence 7788888986 577899999999999999999999999999999999999999999999888743 48999999999
Q ss_pred HHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
++++. .||+++++++|++. ..|...++
T Consensus 204 ~~~~~-~~d~i~~l~~G~i~-~~g~~~~~ 230 (282)
T PRK13640 204 IDEAN-MADQVLVLDDGKLL-AQGSPVEI 230 (282)
T ss_pred HHHHH-hCCEEEEEECCEEE-EeCCHHHH
Confidence 99995 79999999999984 45655443
No 318
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.2e-39 Score=336.62 Aligned_cols=205 Identities=27% Similarity=0.400 Sum_probs=169.8
Q ss_pred cEEEEeEEEEeC---------CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------
Q 006442 97 GVKLENISKSYK---------GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~---------~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------- 160 (645)
+|+++|++|+|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 589999999997 3679999999999999999999999999999999999999999999998752
Q ss_pred ------ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCCh
Q 006442 161 ------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (645)
Q Consensus 161 ------~~i~~v~Q~~~--~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (645)
..++|++|++. +.+..|+.+|+...... +. ..+.
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~--------------~~------------------------~~~~ 124 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRH--------------LL------------------------SLDK 124 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHh--------------hc------------------------cCCH
Confidence 25999999973 44567999887421100 00 0011
Q ss_pred hcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCe
Q 006442 233 DTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVP 308 (645)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~t 308 (645)
.....++.+++..+|+.+...++.+.+||||||||++|||||+.+|+||||||||+|||+.++..+.++|++ .+.|
T Consensus 125 ~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~t 204 (268)
T PRK10419 125 AERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTA 204 (268)
T ss_pred HHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcE
Confidence 112335667788889865567889999999999999999999999999999999999999999988887642 4889
Q ss_pred EEEEecCHHHHHhhcCeEEEEcCceeEEeccC
Q 006442 309 MVIISHDRAFLDQLCTKIVETEMGVSRTYEGN 340 (645)
Q Consensus 309 vIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~ 340 (645)
||++||+++++..+||+++++++|++. ..|.
T Consensus 205 iiivsH~~~~i~~~~d~i~~l~~G~i~-~~g~ 235 (268)
T PRK10419 205 CLFITHDLRLVERFCQRVMVMDNGQIV-ETQP 235 (268)
T ss_pred EEEEECCHHHHHHhCCEEEEEECCEEe-eeCC
Confidence 999999999999999999999999874 4444
No 319
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-39 Score=332.86 Aligned_cols=207 Identities=22% Similarity=0.289 Sum_probs=167.8
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~----------- 160 (645)
+|+++|+++.|+++++|+++||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|..
T Consensus 3 ~l~~~~l~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~ 82 (250)
T PRK14262 3 IIEIENFSAYYGEKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEY 82 (250)
T ss_pred eEEEEeeEEEeCCceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHh
Confidence 58999999999888899999999999999999999999999999999999874 89999987632
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..++|++|++.++. .|+++|+....... .. ......++.+
T Consensus 83 ~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---------------~~-----------------------~~~~~~~~~~ 123 (250)
T PRK14262 83 RKKVGMVFQKPTPFP-MSIYDNVAFGPRIH---------------GV-----------------------KSKHKLDRIV 123 (250)
T ss_pred hhhEEEEecCCccCc-ccHHHHHHHHHHHc---------------CC-----------------------CcHHHHHHHH
Confidence 25999999988765 89999985321100 00 0000112233
Q ss_pred HhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006442 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (645)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (645)
.++++.+|+.. ...++.+.+||||||||++|||||+.+|++|||||||++||+.++.++.++|++ .++|||++||
T Consensus 124 ~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH 203 (250)
T PRK14262 124 EESLKKAALWDEVKSELNKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTH 203 (250)
T ss_pred HHHHHHcCCCchhHHHHhCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeC
Confidence 44555556532 246778999999999999999999999999999999999999999999988753 3689999999
Q ss_pred CHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+++++..+||+++++++|++. ..|..++
T Consensus 204 ~~~~~~~~~d~i~~l~~G~i~-~~g~~~~ 231 (250)
T PRK14262 204 NIGQAIRIADYIAFMYRGELI-EYGPTRE 231 (250)
T ss_pred CHHHHHHhCCEEEEEECCEEE-EecCHHH
Confidence 999999999999999999984 4455443
No 320
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1e-39 Score=334.46 Aligned_cols=201 Identities=25% Similarity=0.368 Sum_probs=172.9
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------------
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------- 489 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------------- 489 (645)
|+++||++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~~ 80 (252)
T TIGR03005 1 VRFSDVTKRFGILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADEK 80 (252)
T ss_pred CEEEEEEEEeCCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccchh
Confidence 47899999998888999999999999999999999999999999999999999999999997652
Q ss_pred --------cchhccchhhcCCCCCCHHHHHHhhhc-------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHH
Q 006442 490 --------PNYFEQNQAEALDLDKTVLETVAEAAE-------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAF 554 (645)
Q Consensus 490 --------~~~~~q~~~~~l~~~~tv~e~v~~~~~-------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~l 554 (645)
.+|++| ...+.+..|+.+|+..... ......+.++++.+++. +..++.+.+||||||||++|
T Consensus 81 ~~~~~~~~i~~v~q--~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~l 157 (252)
T TIGR03005 81 HLRQMRNKIGMVFQ--SFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLA-DKADHMPAQLSGGQQQRVAI 157 (252)
T ss_pred HHHHHhhCeEEEec--CcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hHhhcChhhcCHHHHHHHHH
Confidence 123333 3345667899999976421 01123577889999994 67789999999999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++|||+++|++|+++. .|+.+++.
T Consensus 158 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 235 (252)
T TIGR03005 158 ARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVE-QGKPDEIF 235 (252)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE-eCCHHHHh
Confidence 99999999999999999999999999999998764 4699999999999999999999999999985 46777664
No 321
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=332.83 Aligned_cols=207 Identities=19% Similarity=0.298 Sum_probs=166.7
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~----------- 160 (645)
+|+++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~ 82 (249)
T PRK14253 3 KFNIENLDLFYGENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLR 82 (249)
T ss_pred eEEEeccEEEECCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHH
Confidence 58999999999988899999999999999999999999999999999999986 59999987632
Q ss_pred ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHH
Q 006442 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (645)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (645)
..++|++|++.++. .|+.||+....... .. ......++++.
T Consensus 83 ~~i~~~~q~~~~~~-~tv~~~l~~~~~~~---------------~~-----------------------~~~~~~~~~~~ 123 (249)
T PRK14253 83 IKVGMVFQKPNPFP-MSIYENVAYGLRAQ---------------GI-----------------------KDKKVLDEVVE 123 (249)
T ss_pred hheeEEecCCCcCc-ccHHHHHHhHHHhc---------------CC-----------------------CchHHHHHHHH
Confidence 24999999988765 89999985321100 00 00001122334
Q ss_pred hhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecC
Q 006442 241 KLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHD 315 (645)
Q Consensus 241 ~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd 315 (645)
++++.+|+.. +..++++.+|||||||||+|||||+.+|+||||||||+|||+.++.++.++|++ .+.|||++||+
T Consensus 124 ~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~ 203 (249)
T PRK14253 124 RSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHS 203 (249)
T ss_pred HHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecC
Confidence 4455555431 345677899999999999999999999999999999999999999999888753 36899999999
Q ss_pred HHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
++++..+||+++++++|++. ..|..++
T Consensus 204 ~~~~~~~~d~i~~l~~G~i~-~~g~~~~ 230 (249)
T PRK14253 204 MQQARRISDRTAFFLMGELV-EHDDTQV 230 (249)
T ss_pred HHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 99999999999999999984 4455433
No 322
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=344.81 Aligned_cols=205 Identities=22% Similarity=0.318 Sum_probs=173.7
Q ss_pred EEEEEeeeeeeCC----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC----CCeeEEEECceecc------
Q 006442 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK----PRGGEVLLGEHNVL------ 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~----p~~G~i~~~g~~~~------ 489 (645)
+|+++|+++.|+. ..+|+||||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 5899999999975 469999999999999999999999999999999999997 48999999998752
Q ss_pred --------cchhccchhhcCCCCCCHHHHHHhhhc-------cccHHHHHHHHhhcCCCh--hhhccCcCcCCHhHHHHH
Q 006442 490 --------PNYFEQNQAEALDLDKTVLETVAEAAE-------DWRIDDIKGLLGRCNFKA--DMLDRKVSLLSGGEKARL 552 (645)
Q Consensus 490 --------~~~~~q~~~~~l~~~~tv~e~v~~~~~-------~~~~~~~~~~L~~~~l~~--~~~~~~~~~LSgGqkqrv 552 (645)
.+|++|+....+++.+++.+++..... ....+.+.++|+.+|+.. ...++++++|||||||||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv 162 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRV 162 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHH
Confidence 245566544456778888877654321 112345788999999953 356889999999999999
Q ss_pred HHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHH
Q 006442 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQV 628 (645)
Q Consensus 553 ~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~ 628 (645)
+|||||+.+|+||||||||++||+.++..+.++|+++ +.|+|+||||++.+.++||||++|++|++++. |+.+++
T Consensus 163 ~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~-g~~~~~ 241 (326)
T PRK11022 163 MIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET-GKAHDI 241 (326)
T ss_pred HHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE-CCHHHH
Confidence 9999999999999999999999999999999988754 46999999999999999999999999999864 555554
Q ss_pred H
Q 006442 629 Q 629 (645)
Q Consensus 629 ~ 629 (645)
+
T Consensus 242 ~ 242 (326)
T PRK11022 242 F 242 (326)
T ss_pred h
Confidence 4
No 323
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.3e-39 Score=349.00 Aligned_cols=196 Identities=26% Similarity=0.395 Sum_probs=166.6
Q ss_pred eEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--------------ceEEEEe
Q 006442 102 NISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------MKIAFLS 167 (645)
Q Consensus 102 nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------------~~i~~v~ 167 (645)
|++++|++..+ ++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++
T Consensus 4 ~l~~~~~~~~~--~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~ 81 (354)
T TIGR02142 4 RFSKRLGDFSL--DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVF 81 (354)
T ss_pred EEEEEECCEEE--EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEEEe
Confidence 89999987654 8999999999999999999999999999999999999999987632 2499999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcC
Q 006442 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (645)
Q Consensus 168 Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (645)
|++.+++.+||+||+...+.. ......++++.++++.+|
T Consensus 82 q~~~l~~~~tv~enl~~~~~~-----------------------------------------~~~~~~~~~~~~~l~~~g 120 (354)
T TIGR02142 82 QEARLFPHLSVRGNLRYGMKR-----------------------------------------ARPSERRISFERVIELLG 120 (354)
T ss_pred cCCccCCCCcHHHHHHHHhhc-----------------------------------------cChhHHHHHHHHHHHHcC
Confidence 999888889999998532110 000112345667888889
Q ss_pred CCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhc
Q 006442 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~ 323 (645)
+. +..++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .|+|||++|||++++..+|
T Consensus 121 L~-~~~~~~~~~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~ 199 (354)
T TIGR02142 121 IG-HLLGRLPGRLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLA 199 (354)
T ss_pred Ch-hHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhC
Confidence 96 578899999999999999999999999999999999999999999999887743 4899999999999999999
Q ss_pred CeEEEEcCceeEEeccChH
Q 006442 324 TKIVETEMGVSRTYEGNYS 342 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~ 342 (645)
|+|++|++|++. ..|...
T Consensus 200 d~i~~l~~G~i~-~~g~~~ 217 (354)
T TIGR02142 200 DRVVVLEDGRVA-AAGPIA 217 (354)
T ss_pred CEEEEEeCCEEE-EECCHH
Confidence 999999999984 445543
No 324
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-40 Score=310.59 Aligned_cols=207 Identities=24% Similarity=0.345 Sum_probs=175.7
Q ss_pred ccEEEEeEEEEeCCee--eeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----ceEEEEec
Q 006442 96 SGVKLENISKSYKGVT--VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----MKIAFLSQ 168 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~--vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----~~i~~v~Q 168 (645)
+++.+++++.+|++++ +|+|+|++|.+||.++++||+||||||||++++|+++|+.|+|.+++.+ ..-|.|+|
T Consensus 2 ~~l~~~~~sl~y~g~~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPgaergvVFQ 81 (259)
T COG4525 2 CMLNVSHLSLSYEGKPRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGAERGVVFQ 81 (259)
T ss_pred ceeehhheEEecCCcchhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCccceeEec
Confidence 3578899999998877 9999999999999999999999999999999999999999999988653 35799999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+.+.+|+.||+..++.- ..++..+-...+.+.+..+|+
T Consensus 82 ~~~LlPWl~~~dNvafgL~l---------------------------------------~Gi~k~~R~~~a~q~l~~VgL 122 (259)
T COG4525 82 NEALLPWLNVIDNVAFGLQL---------------------------------------RGIEKAQRREIAHQMLALVGL 122 (259)
T ss_pred cCccchhhHHHHHHHHHHHh---------------------------------------cCCCHHHHHHHHHHHHHHhCc
Confidence 99999999999998644321 112222334556778888999
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEecCHHHHHhhcC
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsHd~~~l~~~~d 324 (645)
. +..++.+.+|||||||||.|||||+.+|++|+||||+.+||+-+++.+.++| +..|+.+++||||++++.-+++
T Consensus 123 ~-~~~~~~i~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflat 201 (259)
T COG4525 123 E-GAEHKYIWQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLAT 201 (259)
T ss_pred c-cccccceEeecchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhh
Confidence 7 5668899999999999999999999999999999999999999999887764 6679999999999999999999
Q ss_pred eEEEEcCc--ee-EEeccChH
Q 006442 325 KIVETEMG--VS-RTYEGNYS 342 (645)
Q Consensus 325 ~i~~l~~G--~~-~~~~g~~~ 342 (645)
+++++..| ++ ..+.-++.
T Consensus 202 rLvvlsp~pgRvv~~~~~df~ 222 (259)
T COG4525 202 RLVVLSPGPGRVVERLPLDFA 222 (259)
T ss_pred eeEEecCCCceeeEecCCCHH
Confidence 99999865 33 33444444
No 325
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.4e-39 Score=327.34 Aligned_cols=198 Identities=29% Similarity=0.376 Sum_probs=171.7
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc------cchhccchh
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------PNYFEQNQA 498 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------~~~~~q~~~ 498 (645)
|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|.
T Consensus 1 l~l~~v~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q~-- 78 (223)
T TIGR03740 1 LETKNLSKRFGKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIES-- 78 (223)
T ss_pred CEEEeEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcCC--
Confidence 47899999998888999999999999999999999999999999999999999999999997652 2344443
Q ss_pred hcCCCCCCHHHHHHhhhc--cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCH
Q 006442 499 EALDLDKTVLETVAEAAE--DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 576 (645)
Q Consensus 499 ~~l~~~~tv~e~v~~~~~--~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~ 576 (645)
..+.+..|+.+|+..... .....++..+++.+++. +..++++.+||||||||++||||++.+|++|||||||++||+
T Consensus 79 ~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 79 PPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLT-NTGKKKAKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred CCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCc-HHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 345566899999875432 22345678899999995 667899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChh
Q 006442 577 PSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (645)
Q Consensus 577 ~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~ 626 (645)
.+++.+.++|.++ +.|||++|||++++.++|||+++|++|++... ++.+
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~-~~~~ 209 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQ-GKIN 209 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEe-cChh
Confidence 9999999999865 35999999999999999999999999999854 4443
No 326
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=338.69 Aligned_cols=203 Identities=27% Similarity=0.367 Sum_probs=170.8
Q ss_pred EEEEeeeeeeCC-----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------
Q 006442 425 VTIKNLEFGYED-----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (645)
Q Consensus 425 i~~~~v~~~y~~-----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (645)
|+++|+++.|++ +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 889999999974 36999999999999999999999999999999999999999999999997652
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHc
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~ 559 (645)
.+|++|+....+ +..|+.+|+...... .. ...+..+++.+++.....++++.+|||||||||+|||||+
T Consensus 83 ~~~~i~~~~q~~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~ 161 (280)
T PRK13649 83 IRKKVGLVFQFPESQL-FEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGILA 161 (280)
T ss_pred HHhheEEEeeChhhhh-ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 134555421123 346999999754321 11 2245678899999645678999999999999999999999
Q ss_pred cCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
.+|++|||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|++.. .|..+++.
T Consensus 162 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 233 (280)
T PRK13649 162 MEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVL-SGKPKDIF 233 (280)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999999998865 4699999999999999999999999999985 46666554
No 327
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=335.89 Aligned_cols=195 Identities=20% Similarity=0.316 Sum_probs=159.8
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC----------
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN---------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~---------- 160 (645)
.+|+++|++++|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 12 ~~l~i~nl~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~ 91 (269)
T PRK14259 12 IIISLQNVTISYGTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVE 91 (269)
T ss_pred ceEEEEeEEEEECCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHH
Confidence 46999999999998889999999999999999999999999999999999987 689999987642
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
..++|++|++.+++ .||+||+....... . .. ...+++
T Consensus 92 ~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~---------------~------------------------~~-~~~~~~ 130 (269)
T PRK14259 92 VRRRIGMVFQQPNPFP-KSIYENIAFGARIN---------------G------------------------YT-GDMDEL 130 (269)
T ss_pred HhhceEEEccCCccch-hhHHHHHhhhhhhc---------------C------------------------Cc-HHHHHH
Confidence 25999999998766 59999985321000 0 00 001122
Q ss_pred HHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006442 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (645)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (645)
+.++++.+++. ....++++.+||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||++|
T Consensus 131 ~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivt 210 (269)
T PRK14259 131 VERSLRKAAVWDECKDKLNESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVT 210 (269)
T ss_pred HHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 23344444432 1346778899999999999999999999999999999999999999999988753 368999999
Q ss_pred cCHHHHHhhcCeEEEEcC
Q 006442 314 HDRAFLDQLCTKIVETEM 331 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~ 331 (645)
|+++++..+||++++|++
T Consensus 211 H~~~~~~~~~d~i~~l~~ 228 (269)
T PRK14259 211 HNMQQAVRVSDMTAFFNA 228 (269)
T ss_pred CCHHHHHHhcCEEEEEec
Confidence 999999999999999997
No 328
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.4e-39 Score=343.12 Aligned_cols=209 Identities=22% Similarity=0.369 Sum_probs=176.3
Q ss_pred CCCcEEEEEeeeeeeC----CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC---eeEEEECceecc---
Q 006442 420 SGRSVVTIKNLEFGYE----DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR---GGEVLLGEHNVL--- 489 (645)
Q Consensus 420 ~~~~~i~~~~v~~~y~----~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~---~G~i~~~g~~~~--- 489 (645)
..+++|+++|+++.|+ ...+++|+||+|++||++||+|+||||||||+++|+|+++|. +|+|.++|.++.
T Consensus 8 ~~~~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~ 87 (330)
T PRK09473 8 QADALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLP 87 (330)
T ss_pred CCCceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCC
Confidence 4566899999999995 257999999999999999999999999999999999999996 999999998752
Q ss_pred -----------cchhccchhhcCCCCCCHHHHHHhhhc---ccc----HHHHHHHHhhcCCCh--hhhccCcCcCCHhHH
Q 006442 490 -----------PNYFEQNQAEALDLDKTVLETVAEAAE---DWR----IDDIKGLLGRCNFKA--DMLDRKVSLLSGGEK 549 (645)
Q Consensus 490 -----------~~~~~q~~~~~l~~~~tv~e~v~~~~~---~~~----~~~~~~~L~~~~l~~--~~~~~~~~~LSgGqk 549 (645)
.+|++|+....+++.+++.+++..... ... ...+.++|+.+++.. ...++.+++||||||
T Consensus 88 ~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~ 167 (330)
T PRK09473 88 EKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMR 167 (330)
T ss_pred HHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHH
Confidence 245666654467788899888764321 111 245778899999853 235789999999999
Q ss_pred HHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCCh
Q 006442 550 ARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDY 625 (645)
Q Consensus 550 qrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~ 625 (645)
|||+|||||+.+|+|||+||||++||+.++..+.++|++. +.|+|+||||++.+.++||||++|++|++++. |+.
T Consensus 168 QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~-g~~ 246 (330)
T PRK09473 168 QRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY-GNA 246 (330)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE-CCH
Confidence 9999999999999999999999999999999999988754 56999999999999999999999999999864 666
Q ss_pred hHHH
Q 006442 626 NQVQ 629 (645)
Q Consensus 626 ~~~~ 629 (645)
++++
T Consensus 247 ~~i~ 250 (330)
T PRK09473 247 RDVF 250 (330)
T ss_pred HHHH
Confidence 5554
No 329
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.6e-39 Score=368.39 Aligned_cols=211 Identities=34% Similarity=0.537 Sum_probs=179.2
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCc-cC
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFE-VS 173 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~-~~ 173 (645)
.++|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++ ....|||++|++. ++
T Consensus 320 ~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~-~~~~i~~v~q~~~~~~ 398 (552)
T TIGR03719 320 DKVIEAENLSKGFGDKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIG-ETVKLAYVDQSRDALD 398 (552)
T ss_pred CeEEEEeeEEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEEC-CceEEEEEeCCccccC
Confidence 457999999999988889999999999999999999999999999999999999999999984 4558999999973 66
Q ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcccc
Q 006442 174 MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDG 253 (645)
Q Consensus 174 ~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~ 253 (645)
+..|+.||+....... ... ..+..+.+++..+|+.....
T Consensus 399 ~~~tv~e~l~~~~~~~---------------------------------------~~~--~~~~~~~~~l~~~~l~~~~~ 437 (552)
T TIGR03719 399 PNKTVWEEISGGLDII---------------------------------------QLG--KREVPSRAYVGRFNFKGSDQ 437 (552)
T ss_pred CCCcHHHHHHhhcccc---------------------------------------ccC--cchHHHHHHHHhCCCChhHh
Confidence 7789999985321100 000 00112345678888864457
Q ss_pred cccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcC-c
Q 006442 254 DRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEM-G 332 (645)
Q Consensus 254 ~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~i~~l~~-G 332 (645)
++++.+|||||||||+|||||+.+|++|||||||+|||+.+++++.++|++.+.|||+||||++++..+||+|+++++ |
T Consensus 438 ~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~viivsHd~~~~~~~~d~i~~l~~~~ 517 (552)
T TIGR03719 438 QKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFAGCAVVISHDRWFLDRIATHILAFEGDS 517 (552)
T ss_pred cCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHhCCEEEEEECCC
Confidence 889999999999999999999999999999999999999999999999988767999999999999999999999986 5
Q ss_pred eeEEeccChHHHHHH
Q 006442 333 VSRTYEGNYSQYVLE 347 (645)
Q Consensus 333 ~~~~~~g~~~~~~~~ 347 (645)
++..+.|++++|...
T Consensus 518 ~~~~~~g~~~~~~~~ 532 (552)
T TIGR03719 518 HVEWFEGNYSEYEED 532 (552)
T ss_pred eEEEeCCCHHHHHHH
Confidence 777789998776443
No 330
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=316.18 Aligned_cols=207 Identities=27% Similarity=0.432 Sum_probs=170.1
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCc-----------eEE
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-----------KIA 164 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~-----------~i~ 164 (645)
++++++|++..|+...+|++|||++++||+++|+|+||+||||||++|+|+.++.+|+|.++|.+. .|+
T Consensus 2 ~mL~v~~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi~ 81 (237)
T COG0410 2 PMLEVENLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGIA 81 (237)
T ss_pred CceeEEeEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCeE
Confidence 469999999999999999999999999999999999999999999999999999999999988643 599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
||||.-.+|+.+||.||+..+...... ..... ..++. +-++..
T Consensus 82 ~VPegR~iF~~LTVeENL~~g~~~~~~------------~~~~~--~~~e~-----------------------v~~lFP 124 (237)
T COG0410 82 YVPEGRRIFPRLTVEENLLLGAYARRD------------KEAQE--RDLEE-----------------------VYELFP 124 (237)
T ss_pred eCcccccchhhCcHHHHHhhhhhcccc------------ccccc--ccHHH-----------------------HHHHCh
Confidence 999999999999999999643211000 00000 00111 111222
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cCCCeEEEEecCHHHHH
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQDVPMVIISHDRAFLD 320 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~g~tvIivsHd~~~l~ 320 (645)
.| .+..++...+|||||||.+||||||+.+|++|||||||.||-|.-.+.+.+.++ +.|.||++|.++..++.
T Consensus 125 ~L---ker~~~~aG~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al 201 (237)
T COG0410 125 RL---KERRNQRAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFAL 201 (237)
T ss_pred hH---HHHhcCcccCCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHH
Confidence 22 145677789999999999999999999999999999999999999999987663 34779999999999999
Q ss_pred hhcCeEEEEcCceeEEeccChHH
Q 006442 321 QLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+++||.++|+.|++ .+.|+-++
T Consensus 202 ~iaDr~yvle~Gri-v~~G~~~e 223 (237)
T COG0410 202 EIADRGYVLENGRI-VLSGTAAE 223 (237)
T ss_pred HhhCEEEEEeCCEE-EEecCHHH
Confidence 99999999999998 67777544
No 331
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.3e-39 Score=326.91 Aligned_cols=197 Identities=26% Similarity=0.410 Sum_probs=166.3
Q ss_pred EEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------------
Q 006442 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------- 160 (645)
Q Consensus 98 i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------- 160 (645)
|+++|+++.|++ ..+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 789999999975 679999999999999999999999999999999999999999999997643
Q ss_pred ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHH
Q 006442 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (645)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (645)
..++|++|++.+++..|+.+|+...... . .....+..+..+.
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~---------------~-----------------------~~~~~~~~~~~~~ 123 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALEL---------------Q-----------------------PNLSYQEARERAR 123 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHh---------------c-----------------------cCCCHHHHHHHHH
Confidence 2599999999887778999998532100 0 0011122334567
Q ss_pred hhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCH
Q 006442 241 KLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDR 316 (645)
Q Consensus 241 ~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~ 316 (645)
++++.+|+. +..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++.+.++|++ .++|||++||++
T Consensus 124 ~~l~~~~l~-~~~~~~~~~lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~ 202 (220)
T TIGR02982 124 AMLEAVGLG-DHLDYYPHNLSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDN 202 (220)
T ss_pred HHHHHcCCh-hhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 788888985 567888999999999999999999999999999999999999999988887742 489999999999
Q ss_pred HHHHhhcCeEEEEcCcee
Q 006442 317 AFLDQLCTKIVETEMGVS 334 (645)
Q Consensus 317 ~~l~~~~d~i~~l~~G~~ 334 (645)
+.. ++||+|+++++|++
T Consensus 203 ~~~-~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 203 RIL-DVADRIVHMEDGKL 219 (220)
T ss_pred HHH-hhCCEEEEEECCEE
Confidence 864 79999999998864
No 332
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.5e-39 Score=331.28 Aligned_cols=202 Identities=28% Similarity=0.399 Sum_probs=170.0
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCC--CCCeeEEEECceecc-----------cc
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLE--KPRGGEVLLGEHNVL-----------PN 491 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~--~p~~G~i~~~g~~~~-----------~~ 491 (645)
|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.++. .+
T Consensus 1 l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (243)
T TIGR01978 1 LKIKDLHVSVEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLF 80 (243)
T ss_pred CeEeeEEEEECCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceE
Confidence 47899999999888999999999999999999999999999999999995 799999999997642 12
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhcc---------cc----HHHHHHHHhhcCCChhhhccCcC-cCCHhHHHHHHHHHH
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAED---------WR----IDDIKGLLGRCNFKADMLDRKVS-LLSGGEKARLAFCKF 557 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~---------~~----~~~~~~~L~~~~l~~~~~~~~~~-~LSgGqkqrv~lAra 557 (645)
|++|+ ..+.+..|+.+++...... .. .+.+..+++.+++.....++++. .|||||||||+||||
T Consensus 81 ~v~q~--~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~la~a 158 (243)
T TIGR01978 81 LAFQY--PEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEILQM 158 (243)
T ss_pred eeecc--ccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHHHHHH
Confidence 33443 3456678999998653210 01 23467889999996455678887 599999999999999
Q ss_pred HccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhh-CCEEEEEeCCeEEeeCCChhHHH
Q 006442 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQI-VNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 558 l~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~-~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|+.+|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++..+ ||++++|++|++.. .|+.+++.
T Consensus 159 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 233 (243)
T TIGR01978 159 ALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVK-SGDVELAK 233 (243)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEE-ecCHHHhc
Confidence 99999999999999999999999999999876 46999999999999998 89999999999975 56766543
No 333
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=336.42 Aligned_cols=210 Identities=20% Similarity=0.285 Sum_probs=166.0
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC---------
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~--------- 160 (645)
.++|+++|++++|++.++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 22 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 101 (271)
T PRK14238 22 KVVFDTQNLNLWYGEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSVE 101 (271)
T ss_pred ceEEEEeeeEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccHH
Confidence 347999999999988889999999999999999999999999999999999987 699999988642
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..++|++|++.++. .|+.||+....... . . . +....+.
T Consensus 102 ~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~-~--------------~-~----------------------~~~~~~~ 142 (271)
T PRK14238 102 ELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIH-G--------------I-K----------------------DKKTLDE 142 (271)
T ss_pred HHhhhEEEEecCCcccc-ccHHHHHHHHHHhc-C--------------C-C----------------------cHHHHHH
Confidence 25999999988765 59999986321100 0 0 0 0000111
Q ss_pred HHHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006442 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (645)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (645)
.+.+++..+++. .+..++++.+||||||||++|||||+.+|++|||||||++||+.++.++.++|++ .+.|||++
T Consensus 143 ~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiv 222 (271)
T PRK14238 143 IVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIV 222 (271)
T ss_pred HHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEE
Confidence 222333333211 1345677899999999999999999999999999999999999999999988753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
|||++++..+||+++++++|++. ..|...++
T Consensus 223 sH~~~~i~~~~d~i~~l~~G~i~-~~g~~~~~ 253 (271)
T PRK14238 223 THNMQQAARISDKTAFFLNGYVN-EYDDTDKI 253 (271)
T ss_pred EcCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999999999999984 44655443
No 334
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-39 Score=337.55 Aligned_cols=203 Identities=28% Similarity=0.424 Sum_probs=172.9
Q ss_pred EEEEEeeeeeeCC---eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------c
Q 006442 424 VVTIKNLEFGYED---RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (645)
Q Consensus 424 ~i~~~~v~~~y~~---~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~ 490 (645)
+|+++|+++.|++ +.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 6999999999963 45999999999999999999999999999999999999999999999998763 2
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCe
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 564 (645)
+|++|+.. ...+..|+.+|+.+.... . ....+..+++.+++. +..++.+.+||||||||++|||||+.+|++
T Consensus 84 ~~v~q~~~-~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGq~qrv~lAral~~~p~l 161 (279)
T PRK13650 84 GMVFQNPD-NQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQ-DFKEREPARLSGGQKQRVAIAGAVAMRPKI 161 (279)
T ss_pred eEEEcChH-HhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 35555432 234567999999865321 1 124578899999994 678999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 565 LlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|||||||++||+.++..+.+.|+++ +.|||+||||++++. +|||+++|++|++.. .|+.+++..
T Consensus 162 LlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~-~~dri~~l~~G~i~~-~g~~~~~~~ 229 (279)
T PRK13650 162 IILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVA-LSDRVLVMKNGQVES-TSTPRELFS 229 (279)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEE-ECCHHHHHc
Confidence 9999999999999999999988754 569999999999995 799999999999985 466666543
No 335
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=6.6e-40 Score=324.46 Aligned_cols=186 Identities=25% Similarity=0.402 Sum_probs=161.6
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEEec
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v~Q 168 (645)
|+++|+++.|+++.+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++.. ..++|++|
T Consensus 1 l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (201)
T cd03231 1 LEADELTCERDGRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYLGH 80 (201)
T ss_pred CEEEEEEEEeCCceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEecc
Confidence 478999999998889999999999999999999999999999999999999999999987643 25999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++..|++||+...... ..++++.++++.+|+
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~---------------------------------------------~~~~~~~~~l~~~~l 115 (201)
T cd03231 81 APGIKTTLSVLENLRFWHAD---------------------------------------------HSDEQVEEALARVGL 115 (201)
T ss_pred ccccCCCcCHHHHHHhhccc---------------------------------------------ccHHHHHHHHHHcCC
Confidence 98887789999998521000 012344566777788
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCe
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTK 325 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ 325 (645)
. +..++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|+ +.|.|+|++||+...+..+|++
T Consensus 116 ~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~ 194 (201)
T cd03231 116 N-GFEDRPVAQLSAGQQRRVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGAR 194 (201)
T ss_pred h-hhhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccce
Confidence 5 45678899999999999999999999999999999999999999999998875 3489999999999999999999
Q ss_pred EEEE
Q 006442 326 IVET 329 (645)
Q Consensus 326 i~~l 329 (645)
++.+
T Consensus 195 ~~~~ 198 (201)
T cd03231 195 ELDL 198 (201)
T ss_pred eEec
Confidence 9876
No 336
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=337.52 Aligned_cols=207 Identities=24% Similarity=0.330 Sum_probs=171.4
Q ss_pred cEEEEeEEEEeCC---eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceE
Q 006442 97 GVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (645)
Q Consensus 97 ~i~i~nls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i 163 (645)
+|+++|++++|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 6999999999974 359999999999999999999999999999999999999999999998643 249
Q ss_pred EEEeccCc-cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 164 AFLSQEFE-VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 164 ~~v~Q~~~-~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
+|++|++. .++..||.+|+....... ........+++.++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~---------------------------------------~~~~~~~~~~~~~~ 124 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQ---------------------------------------GIPREEMIKRVDEA 124 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHc---------------------------------------CCCHHHHHHHHHHH
Confidence 99999984 456789999985321000 00111223455677
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---c-CCCeEEEEecCHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---K-QDVPMVIISHDRAF 318 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~-~g~tvIivsHd~~~ 318 (645)
++.+|+. ...++++.+||||||||++|||||+.+|++|||||||++||+.++..+.++|+ + .|.|||++||++++
T Consensus 125 l~~~~l~-~~~~~~~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~ 203 (277)
T PRK13642 125 LLAVNML-DFKTREPARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE 203 (277)
T ss_pred HHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 7888885 56788899999999999999999999999999999999999999999988774 2 48999999999999
Q ss_pred HHhhcCeEEEEcCceeEEeccChHHHH
Q 006442 319 LDQLCTKIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 319 l~~~~d~i~~l~~G~~~~~~g~~~~~~ 345 (645)
+. .||+|+++++|++. ..|+.+++.
T Consensus 204 ~~-~~d~i~~l~~G~i~-~~g~~~~~~ 228 (277)
T PRK13642 204 AA-SSDRILVMKAGEII-KEAAPSELF 228 (277)
T ss_pred HH-hCCEEEEEECCEEE-EeCCHHHHh
Confidence 97 59999999999974 456655543
No 337
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=331.97 Aligned_cols=204 Identities=26% Similarity=0.390 Sum_probs=171.7
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCeeEEEECceecc-------
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL------- 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~------- 489 (645)
.++|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 4 ~~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 4 PPKMEARGLSFFYGDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred CcEEEEeeeEEEECCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 457999999999988889999999999999999999999999999999999974 58999999997752
Q ss_pred -----cchhccchhhcCCCCCCHHHHHHhhhcc-------ccHHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHH
Q 006442 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED-------WRIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAF 554 (645)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~v~~~~~~-------~~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~l 554 (645)
.+|++|+. .++. .|+.+|+...... ...+++..+++.+++.. ...++++.+|||||||||+|
T Consensus 84 ~~~~~i~~v~q~~--~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~l 160 (253)
T PRK14242 84 ELRRRVGMVFQKP--NPFP-KSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQRLCI 160 (253)
T ss_pred HHhhcEEEEecCC--CCCc-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHH
Confidence 13444442 3434 5999999764311 11245677888888842 34578899999999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|++.. .|..+++.
T Consensus 161 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~ 236 (253)
T PRK14242 161 ARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIE-VGPTEQIF 236 (253)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999999876 3599999999999999999999999999985 46666654
No 338
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=336.14 Aligned_cols=204 Identities=26% Similarity=0.403 Sum_probs=173.7
Q ss_pred EEEEEeeeeeeC-CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cch
Q 006442 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (645)
Q Consensus 424 ~i~~~~v~~~y~-~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (645)
+++++|++++|+ .+.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 3 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 3 LIETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred eEEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 589999999996 456999999999999999999999999999999999999999999999998653 234
Q ss_pred hccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEE
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 566 (645)
++|+... ..+..|+.+|+...... .. ...+..+++.+++. +..++.+..||||||||++|||||+.+|++||
T Consensus 83 v~q~~~~-~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrl~laraL~~~p~lli 160 (277)
T PRK13652 83 VFQNPDD-QIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLE-ELRDRVPHHLSGGEKKRVAIAGVIAMEPQVLV 160 (277)
T ss_pred EecCccc-ccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCCh-hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 4444221 23467999999754321 11 23467889999995 67899999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 567 LDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 567 LDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|||||++||+.++..+.+.|++. +.|||++|||++++.++|||+++|++|+++. .|+.+++.+
T Consensus 161 lDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~-~g~~~~~~~ 227 (277)
T PRK13652 161 LDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVA-YGTVEEIFL 227 (277)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEE-ECCHHHHhc
Confidence 99999999999999999988753 5699999999999999999999999999985 577777653
No 339
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=8.9e-40 Score=331.53 Aligned_cols=191 Identities=28% Similarity=0.446 Sum_probs=158.8
Q ss_pred EEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEEe-ccCccCC
Q 006442 105 KSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLS-QEFEVSM 174 (645)
Q Consensus 105 ~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v~-Q~~~~~~ 174 (645)
++|+.+++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++.. ..++|++ |.+.+++
T Consensus 29 ~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 29 RKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred cccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 55666789999999999999999999999999999999999999999999987642 2599997 5566767
Q ss_pred CCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCccccc
Q 006442 175 SRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGD 254 (645)
Q Consensus 175 ~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~ 254 (645)
..|+.||+..... +. .........++.++++.+|+. +..+
T Consensus 109 ~~tv~e~l~~~~~---------------~~------------------------~~~~~~~~~~~~~~l~~~gl~-~~~~ 148 (236)
T cd03267 109 DLPVIDSFYLLAA---------------IY------------------------DLPPARFKKRLDELSELLDLE-ELLD 148 (236)
T ss_pred CCcHHHHHHHHHH---------------Hc------------------------CCCHHHHHHHHHHHHHHcCCh-hHhc
Confidence 8899999742100 00 001112233455677778885 5678
Q ss_pred ccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEEEEc
Q 006442 255 RLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIVETE 330 (645)
Q Consensus 255 ~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~i~~l~ 330 (645)
+++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++||+++++..+||++++++
T Consensus 149 ~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~ 228 (236)
T cd03267 149 TPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVID 228 (236)
T ss_pred CChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEe
Confidence 88999999999999999999999999999999999999999999988753 37899999999999999999999999
Q ss_pred CceeE
Q 006442 331 MGVSR 335 (645)
Q Consensus 331 ~G~~~ 335 (645)
+|++.
T Consensus 229 ~G~i~ 233 (236)
T cd03267 229 KGRLL 233 (236)
T ss_pred CCEEE
Confidence 99873
No 340
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.3e-39 Score=329.15 Aligned_cols=201 Identities=24% Similarity=0.371 Sum_probs=170.1
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------cchh
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PNYF 493 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~~~ 493 (645)
|+++||++.|+++++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 80 (230)
T TIGR03410 1 LEVSNLNVYYGQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAYV 80 (230)
T ss_pred CEEEeEEEEeCCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEEe
Confidence 47899999999888999999999999999999999999999999999999999999999997652 1244
Q ss_pred ccchhhcCCCCCCHHHHHHhhhccc---cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCC
Q 006442 494 EQNQAEALDLDKTVLETVAEAAEDW---RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~~~---~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 570 (645)
+|+ ..+++..|+.+|+....... .......+++.++...+..++++.+||||||||++|||||+.+|++||||||
T Consensus 81 ~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~illlDEP 158 (230)
T TIGR03410 81 PQG--REIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLLLLDEP 158 (230)
T ss_pred ccC--CcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 443 34556789999997653221 1223466677776324567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHH
Q 006442 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQV 628 (645)
Q Consensus 571 t~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~ 628 (645)
|++||+.++..+.+.|.+. +.|||+||||++++..+||+++++++|+++. .++.+++
T Consensus 159 t~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~-~~~~~~~ 219 (230)
T TIGR03410 159 TEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVA-SGAGDEL 219 (230)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHc
Confidence 9999999999999999864 4699999999999999999999999999985 4666654
No 341
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-39 Score=350.60 Aligned_cols=201 Identities=23% Similarity=0.318 Sum_probs=167.7
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------------c
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------P 490 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------------~ 490 (645)
+++.++...|+...+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 29 ~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~i 108 (400)
T PRK10070 29 LSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKI 108 (400)
T ss_pred ccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCE
Confidence 33344444444444899999999999999999999999999999999999999999999998752 2
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCe
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 564 (645)
+|++|+ ..+++..|+.+|+.+.... + ..+++.++|+.+++. +..++++.+|||||||||+|||||+.+|++
T Consensus 109 gyv~Q~--~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~-~~~~~~~~~LSgGq~QRv~LArAL~~~P~i 185 (400)
T PRK10070 109 AMVFQS--FALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLE-NYAHSYPDELSGGMRQRVGLARALAINPDI 185 (400)
T ss_pred EEEECC--CcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-hhhhcCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 344443 4566788999999865321 1 124577899999995 678999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 565 LlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||||||++||+.+++.+++.|.++ +.|||+||||++++.++||++++|++|++.. .|..+++.
T Consensus 186 LLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~-~g~~~~l~ 253 (400)
T PRK10070 186 LLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQ-VGTPDEIL 253 (400)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEe-cCCHHHHH
Confidence 9999999999999999999998754 4699999999999999999999999999985 46655554
No 342
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=338.92 Aligned_cols=205 Identities=25% Similarity=0.379 Sum_probs=170.9
Q ss_pred cEEEEEeeeeeeCCe-----eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------
Q 006442 423 SVVTIKNLEFGYEDR-----LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~-----~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------- 489 (645)
..|+++|++++|+++ .+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 359999999999754 4999999999999999999999999999999999999999999999997642
Q ss_pred -------cchhccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHH
Q 006442 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCK 556 (645)
Q Consensus 490 -------~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAr 556 (645)
.+|++|+....+ +..|+.+|+.+.... .. ...+..+++.+++..+..++++.+|||||||||+|||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~-~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~lar 163 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQL-FQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAG 163 (289)
T ss_pred HHHHhccEEEEEeCcchhh-hhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHH
Confidence 134444422122 346999999764321 11 1345678899999545678999999999999999999
Q ss_pred HHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||+.+|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++.++||++++|++|+++.. ++.+++.
T Consensus 164 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~-g~~~~~~ 239 (289)
T PRK13645 164 IIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISI-GSPFEIF 239 (289)
T ss_pred HHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe-CCHHHHh
Confidence 999999999999999999999999999988754 46999999999999999999999999999854 6655543
No 343
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=336.94 Aligned_cols=208 Identities=24% Similarity=0.295 Sum_probs=170.6
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCC--------ccEEEEcCCCc-------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD--------SGNVIKAKSNM------- 161 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~--------~G~I~~~~~~~------- 161 (645)
+|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|...
T Consensus 1 ml~~~nl~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (272)
T PRK13547 1 MLTADHLHVARRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPR 80 (272)
T ss_pred CeEEEEEEEEECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHH
Confidence 388999999999889999999999999999999999999999999999999998 99999987421
Q ss_pred ---eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 162 ---KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 162 ---~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
.++|++|++..++..|+.||+......... .. ..........
T Consensus 81 ~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~-------------~~----------------------~~~~~~~~~~ 125 (272)
T PRK13547 81 LARLRAVLPQAAQPAFAFSAREIVLLGRYPHAR-------------RA----------------------GALTHRDGEI 125 (272)
T ss_pred HHhhcEEecccCCCCCCCcHHHHHhhccccccc-------------cc----------------------ccCCHHHHHH
Confidence 389999998766678999998532100000 00 0000111234
Q ss_pred HHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHc---------cCCCEEEEeCCCCCCCHHHHHHHHHHHcc----C
Q 006442 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILL---------QDPDLLLLDEPTNHLDLDTIEWLEGYLGK----Q 305 (645)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~---------~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~ 305 (645)
+.++++.+|+. ...++++.+|||||||||+|||||+ .+|++|||||||++||+.+++++.++|++ .
T Consensus 126 ~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~ 204 (272)
T PRK13547 126 AWQALALAGAT-ALVGRDVTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDW 204 (272)
T ss_pred HHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhc
Confidence 56778888886 4678889999999999999999999 59999999999999999999999988753 3
Q ss_pred CCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccCh
Q 006442 306 DVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNY 341 (645)
Q Consensus 306 g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~ 341 (645)
+.|||+||||++++..+||+++++++|++. ..|+.
T Consensus 205 ~~tviiisH~~~~~~~~~d~i~~l~~G~i~-~~g~~ 239 (272)
T PRK13547 205 NLGVLAIVHDPNLAARHADRIAMLADGAIV-AHGAP 239 (272)
T ss_pred CCEEEEEECCHHHHHHhCCEEEEEECCeEE-EecCH
Confidence 899999999999999999999999999874 44553
No 344
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=337.07 Aligned_cols=210 Identities=21% Similarity=0.275 Sum_probs=167.9
Q ss_pred CCccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC--------
Q 006442 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN-------- 160 (645)
Q Consensus 94 ~~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~-------- 160 (645)
..+.|+++|++++|++.++|+|+||+|++|++++|+|+||||||||+++|+|+.+ |++|+|.++|..
T Consensus 36 ~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 36 GKPHVVAKNFSIYYGEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred CceEEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 3457999999999988889999999999999999999999999999999999864 499999987632
Q ss_pred ----ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHH
Q 006442 161 ----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLD 236 (645)
Q Consensus 161 ----~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (645)
..++|++|++.++. .||.||+...... ... .+....+
T Consensus 116 ~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~---------------~~~-----------------------~~~~~~~ 156 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFP-KSIFDNIAYGPRL---------------HGI-----------------------NDKKQLE 156 (286)
T ss_pred HHhhhcEEEECCCCCCCc-cCHHHHHHhHHHh---------------cCC-----------------------CcHHHHH
Confidence 25999999988765 5999998532100 000 0000112
Q ss_pred HHHHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEE
Q 006442 237 AKVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVI 311 (645)
Q Consensus 237 ~~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIi 311 (645)
+++.++++.+|+. .+..++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .+.|||+
T Consensus 157 ~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIi 236 (286)
T PRK14275 157 EIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMI 236 (286)
T ss_pred HHHHHHHHHhCCccchhhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEE
Confidence 2344455555552 2345778899999999999999999999999999999999999999999988753 3579999
Q ss_pred EecCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 312 ISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 312 vsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+|||++++.++||++++|++|++. ..|...+
T Consensus 237 vsH~~~~~~~~~d~i~~L~~G~i~-~~g~~~~ 267 (286)
T PRK14275 237 VTHNMQQASRVSDYTMFFYEGVLV-EHAPTAQ 267 (286)
T ss_pred EeCCHHHHHHhCCEEEEEECCEEE-EeCCHHH
Confidence 999999999999999999999984 4455443
No 345
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.1e-40 Score=348.61 Aligned_cols=201 Identities=24% Similarity=0.477 Sum_probs=178.6
Q ss_pred cEEEEEeeeeeeCCee-ceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cc
Q 006442 423 SVVTIKNLEFGYEDRL-LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PN 491 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~-~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~ 491 (645)
..|+++||++.|++++ +|+++||+|++||++||+|+|||||||+||+|+++++ ++|+|.+||.+++ .+
T Consensus 350 ~~I~F~dV~f~y~~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig 428 (591)
T KOG0057|consen 350 GSIEFDDVHFSYGPKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIG 428 (591)
T ss_pred CcEEEEeeEEEeCCCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhhee
Confidence 3499999999998765 9999999999999999999999999999999999999 9999999999873 35
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhh-----------ccCcCcCCHhHHHHHHHHHHHcc
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML-----------DRKVSLLSGGEKARLAFCKFMVK 560 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~-----------~~~~~~LSgGqkqrv~lAral~~ 560 (645)
+++|+ ...++.|+..|+..+....+.+++.+..+++|+. +.. ......|||||||||+||||+++
T Consensus 429 ~VPQd---~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~h-d~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lK 504 (591)
T KOG0057|consen 429 VVPQD---SVLFNDTILYNIKYGNPSASDEEVVEACKRAGLH-DVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLK 504 (591)
T ss_pred EeCCc---ccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcH-HHHHhccccchhhHhhcccccccchHHHHHHHHHHhc
Confidence 66664 3457899999999998888889999999999885 322 23345799999999999999999
Q ss_pred CCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 561 ~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
+|+|+++|||||+||.+++..+.+.+... ++|+|+|.||++++.+ ||+|+++++|++.++ |+.++++.
T Consensus 505 da~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~-~DkI~~l~nG~v~e~-gth~ell~ 574 (591)
T KOG0057|consen 505 DAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKD-FDKIIVLDNGTVKEY-GTHSELLA 574 (591)
T ss_pred CCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhc-CCEEEEEECCeeEEe-ccHHHHhh
Confidence 99999999999999999999999999863 4699999999999987 999999999999975 78887776
No 346
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=2.2e-39 Score=331.05 Aligned_cols=213 Identities=21% Similarity=0.286 Sum_probs=168.2
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCC--CCCccEEEEcCCC-----------ceE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EPDSGNVIKAKSN-----------MKI 163 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~--~p~~G~I~~~~~~-----------~~i 163 (645)
+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|++ +|++|+|.++|.+ ..+
T Consensus 1 ~i~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (248)
T PRK09580 1 MLSIKDLHVSVEDKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGI 80 (248)
T ss_pred CeEEEEEEEEeCCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcce
Confidence 378999999999888999999999999999999999999999999999995 6999999998743 249
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhc
Q 006442 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (645)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (645)
+|++|++.+++..|..+++...+.. +.. .. .....+.......+.+++
T Consensus 81 ~~~~q~~~~~~~~~~~~~~~~~~~~----------~~~-~~---------------------~~~~~~~~~~~~~~~~~l 128 (248)
T PRK09580 81 FMAFQYPVEIPGVSNQFFLQTALNA----------VRS-YR---------------------GQEPLDRFDFQDLMEEKI 128 (248)
T ss_pred EEEecCchhccchhHHHHHHHhhhh----------hhc-cc---------------------ccccchHHHHHHHHHHHH
Confidence 9999998766655654443211100 000 00 000011122344566778
Q ss_pred hhcCCCcccccccCC-CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHH
Q 006442 244 PELGFTADDGDRLVA-SFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFL 319 (645)
Q Consensus 244 ~~lgl~~~~~~~~~~-~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l 319 (645)
+.++++....++.+. +|||||||||+|||||+.+|++|||||||++||+.+++++.++|+ +.++|||++|||++++
T Consensus 129 ~~~~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~ 208 (248)
T PRK09580 129 ALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRIL 208 (248)
T ss_pred HHcCCChhhcccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 888886456667675 899999999999999999999999999999999999999988663 4589999999999999
Q ss_pred Hhh-cCeEEEEcCceeEEeccChH
Q 006442 320 DQL-CTKIVETEMGVSRTYEGNYS 342 (645)
Q Consensus 320 ~~~-~d~i~~l~~G~~~~~~g~~~ 342 (645)
..+ ||+|+++++|++ .+.|+++
T Consensus 209 ~~~~~d~i~~l~~g~i-~~~g~~~ 231 (248)
T PRK09580 209 DYIKPDYVHVLYQGRI-VKSGDFT 231 (248)
T ss_pred HhhhCCEEEEEECCeE-EEeCCHH
Confidence 987 899999999988 4567654
No 347
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.1e-39 Score=332.93 Aligned_cols=201 Identities=30% Similarity=0.469 Sum_probs=174.0
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cchhc
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYFE 494 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~~ 494 (645)
|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|++
T Consensus 2 l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~ 81 (256)
T TIGR03873 2 LRLSRVSWSAGGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALVE 81 (256)
T ss_pred ceEEeEEEEECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEec
Confidence 68999999999889999999999999999999999999999999999999999999999997652 23555
Q ss_pred cchhhcCCCCCCHHHHHHhhhc--------c--ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCe
Q 006442 495 QNQAEALDLDKTVLETVAEAAE--------D--WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (645)
Q Consensus 495 q~~~~~l~~~~tv~e~v~~~~~--------~--~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 564 (645)
|+. .+.+..|+.+|+..... . .....+.++++.+++ .+..++++.+||||||||++|||||+.+|++
T Consensus 82 q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-~~~~~~~~~~LS~G~~qrl~la~al~~~p~l 158 (256)
T TIGR03873 82 QDS--DTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTEL-SHLADRDMSTLSGGERQRVHVARALAQEPKL 158 (256)
T ss_pred ccC--ccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCc-HhhhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 542 34567899999976321 0 112357788999999 4678999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 565 LlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||||||++||+.++..+.++|+++ +.|||++|||++++.++||++++|++|+++. .|..+++.
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 225 (256)
T TIGR03873 159 LLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVA-AGPPREVL 225 (256)
T ss_pred EEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEE-ecCHHHhh
Confidence 9999999999999999999999865 4699999999999999999999999999985 46766653
No 348
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-39 Score=330.49 Aligned_cols=203 Identities=22% Similarity=0.320 Sum_probs=162.3
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC--C---CccEEEEcCCC----------
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE--P---DSGNVIKAKSN---------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~--p---~~G~I~~~~~~---------- 160 (645)
.+|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ | ++|+|.++|.+
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 83 (252)
T PRK14255 4 KIITSSDVHLFYGKFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQ 83 (252)
T ss_pred ceEEEEeEEEEECCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHH
Confidence 36999999999998889999999999999999999999999999999999875 4 58999987642
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
..++|++|++.+++ .|+.+|+...+... .. . .....+..
T Consensus 84 ~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~---------------~~-~----------------------~~~~~~~~ 124 (252)
T PRK14255 84 LRKQVGMVFQQPNPFP-FSIYENVIYGLRLA---------------GV-K----------------------DKAVLDEA 124 (252)
T ss_pred hcCeEEEEECCCccCC-CcHHHHHHHHHHHc---------------CC-C----------------------CHHHHHHH
Confidence 25999999988766 79999985321100 00 0 00001112
Q ss_pred HHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006442 239 VSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (645)
Q Consensus 239 i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (645)
+.+.++.+++. .+..++.+.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||+||
T Consensus 125 ~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vs 204 (252)
T PRK14255 125 VETSLKQAAIWDEVKDHLHESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVT 204 (252)
T ss_pred HHHHHHHcCCccchhhHHhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEE
Confidence 22333334331 1345677899999999999999999999999999999999999999999988753 258999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEe
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTY 337 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~ 337 (645)
|+++++.++||+|+++++|++..+
T Consensus 205 H~~~~~~~~~d~i~~l~~G~i~~~ 228 (252)
T PRK14255 205 HSMHQASRISDKTAFFLTGNLIEF 228 (252)
T ss_pred CCHHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999998543
No 349
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=335.91 Aligned_cols=203 Identities=27% Similarity=0.402 Sum_probs=173.6
Q ss_pred EEEEEeeeeeeC-CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc------------c
Q 006442 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------------P 490 (645)
Q Consensus 424 ~i~~~~v~~~y~-~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------------~ 490 (645)
+|+++|++++|+ .+++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 1 ILETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred CEEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 478999999996 457999999999999999999999999999999999999999999999998752 1
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCe
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 564 (645)
+|++|+.... .+..|+.+|+...... . ....+..+++.+++. +..++++.+||||||||++|||||+.+|++
T Consensus 81 ~~v~q~~~~~-~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LS~Gq~qrv~laral~~~p~l 158 (275)
T PRK13639 81 GIVFQNPDDQ-LFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGME-GFENKPPHHLSGGQKKRVAIAGILAMKPEI 158 (275)
T ss_pred EEEeeChhhh-hccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 3455543222 2457999999754321 1 124577899999994 678999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 565 LVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 565 LlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||||||++||+.++..+.+.|.++ +.|||+||||++++.++|||+++|++|+++. .|+.+++.
T Consensus 159 lllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 225 (275)
T PRK13639 159 IVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIK-EGTPKEVF 225 (275)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 9999999999999999999999865 4699999999999999999999999999985 47777654
No 350
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-39 Score=330.51 Aligned_cols=204 Identities=24% Similarity=0.358 Sum_probs=172.1
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CeeEEEECceecc-------
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------- 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~------- 489 (645)
.++|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 5 ~~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 5 EAIIETENLNLFYTDFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred CceEEEeeeEEEeCCceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 4579999999999888899999999999999999999999999999999999987 4899999997652
Q ss_pred -----cchhccchhhcCCCCCCHHHHHHhhhcc---cc----HHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHHHH
Q 006442 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (645)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~l 554 (645)
.+|++|+ ..+. ..|+.+|+.+.... +. .+.+...++.+++. .+..++++.+|||||||||+|
T Consensus 85 ~~~~~i~~v~q~--~~~~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~l 161 (254)
T PRK14273 85 ELRRKIGMVFQT--PNPF-LMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLCI 161 (254)
T ss_pred HHhhceEEEeec--cccc-cCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHHH
Confidence 1244444 2333 58999999764321 11 23467778888863 245688999999999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||+.+|++|||||||++||+.++..+.+.|+++. .|||+||||++++.++|||+++|++|+++. .|..+++.
T Consensus 162 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 237 (254)
T PRK14273 162 ARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEE-ESSTDELF 237 (254)
T ss_pred HHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 999999999999999999999999999999998763 599999999999999999999999999985 46666654
No 351
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=3.4e-39 Score=330.86 Aligned_cols=205 Identities=20% Similarity=0.284 Sum_probs=167.8
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC----CccEEEEcCCC--------ceEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP----DSGNVIKAKSN--------MKIA 164 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p----~~G~I~~~~~~--------~~i~ 164 (645)
.|+++|++++| ++++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+ ..|+
T Consensus 4 ~l~~~~l~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~ 82 (254)
T PRK10418 4 QIELRNIALQA-AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIA 82 (254)
T ss_pred EEEEeCeEEEe-ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEE
Confidence 58999999999 56799999999999999999999999999999999999999 99999998743 3599
Q ss_pred EEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 165 FLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 165 ~v~Q~~~--~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
|++|++. +.+..|+.+++...... ......++++.++
T Consensus 83 ~v~q~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~ 121 (254)
T PRK10418 83 TIMQNPRSAFNPLHTMHTHARETCLA-----------------------------------------LGKPADDATLTAA 121 (254)
T ss_pred EEecCCccccCccccHHHHHHHHHHH-----------------------------------------cCCChHHHHHHHH
Confidence 9999974 33446787775321000 0000012345667
Q ss_pred chhcCCCcc--cccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCH
Q 006442 243 MPELGFTAD--DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDR 316 (645)
Q Consensus 243 l~~lgl~~~--~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~ 316 (645)
++.+|+... ..++.+.+|||||||||+|||||+.+|++|||||||++||+.+++.+.++|++ .|.|||++||++
T Consensus 122 l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~ 201 (254)
T PRK10418 122 LEAVGLENAARVLKLYPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDM 201 (254)
T ss_pred HHHcCCCChhhhhhcCCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCH
Confidence 788888532 46788999999999999999999999999999999999999999999887743 478999999999
Q ss_pred HHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 317 AFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 317 ~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+++..+||+++++++|++. ..|..+++
T Consensus 202 ~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 228 (254)
T PRK10418 202 GVVARLADDVAVMSHGRIV-EQGDVETL 228 (254)
T ss_pred HHHHHhCCEEEEEECCEEE-EecCHHHH
Confidence 9999999999999999973 55665443
No 352
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-39 Score=331.36 Aligned_cols=205 Identities=22% Similarity=0.335 Sum_probs=172.1
Q ss_pred CCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CeeEEEECceecc------
Q 006442 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------ 489 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~------ 489 (645)
..++|+++|++++|+++.+|+++||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 9 ~~~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 9 AQPQIKVENLNLWYGEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred cceeEEEeeeEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 34579999999999888899999999999999999999999999999999999975 7999999997652
Q ss_pred ------cchhccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHHHH
Q 006442 490 ------PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (645)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~l 554 (645)
.+|++|. ..+.. .|+.+|+...... .. ...+..+++.+++. .+..++++.+|||||||||+|
T Consensus 89 ~~~~~~i~~v~q~--~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~l 165 (258)
T PRK14268 89 VELRKNVGMVFQK--PNPFP-MSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLCI 165 (258)
T ss_pred HHHhhhEEEEecC--CccCc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHH
Confidence 1234443 23434 8999999764321 11 22466788888873 244688999999999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++|||+++|++|++.. .+..+++.
T Consensus 166 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 241 (258)
T PRK14268 166 ARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIE-FGQTRQIF 241 (258)
T ss_pred HHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 99999999999999999999999999999999865 3699999999999999999999999999985 46666654
No 353
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=332.45 Aligned_cols=211 Identities=18% Similarity=0.291 Sum_probs=171.2
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcC------C---------
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAK------S--------- 159 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~------~--------- 159 (645)
.++|.++|++++|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 8 ~~~i~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 8 EDVFNISRLYLYINDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred hhheeeeeEEEecCCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 4569999999999999999999999999999999999999999999999999999997766543 2
Q ss_pred -CceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 160 -NMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 160 -~~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
...++|++|++.+++..|+.+|+....... . ..+......+
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~---------------~-----------------------~~~~~~~~~~ 129 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKSH---------------G-----------------------IKEKREIKKI 129 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHhc---------------C-----------------------CCCHHHHHHH
Confidence 135999999998877889999985321000 0 0001112234
Q ss_pred HHhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006442 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (645)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (645)
+.++++.+|+.. +..++.+..||||||||++|||||+.+|++|||||||++||+.++.++.++|.+ .+.|||++|
T Consensus 130 ~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvs 209 (257)
T PRK14246 130 VEECLRKVGLWKEVYDRLNSPASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVS 209 (257)
T ss_pred HHHHHHHcCCCccchhhhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEE
Confidence 556666777642 345778899999999999999999999999999999999999999999988753 368999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
|+++++..+||+++++++|++.. .|..++.
T Consensus 210 h~~~~~~~~~d~v~~l~~g~i~~-~g~~~~~ 239 (257)
T PRK14246 210 HNPQQVARVADYVAFLYNGELVE-WGSSNEI 239 (257)
T ss_pred CCHHHHHHhCCEEEEEECCEEEE-ECCHHHH
Confidence 99999999999999999999853 4554443
No 354
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.7e-39 Score=346.48 Aligned_cols=194 Identities=24% Similarity=0.384 Sum_probs=168.5
Q ss_pred eeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------------cchhccch
Q 006442 432 FGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------PNYFEQNQ 497 (645)
Q Consensus 432 ~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------------~~~~~q~~ 497 (645)
+.|+++.+++++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 ~~~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~- 79 (363)
T TIGR01186 1 KKTGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQ- 79 (363)
T ss_pred CccCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECC-
Confidence 3577888999999999999999999999999999999999999999999999998763 2344443
Q ss_pred hhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCC
Q 006442 498 AEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (645)
Q Consensus 498 ~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt 571 (645)
..+++.+|+.+|+.+.... + ..+++.++|+.+|+. ...++++.+|||||||||+|||||+.+|++|||||||
T Consensus 80 -~~l~~~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~-~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~ 157 (363)
T TIGR01186 80 -FALFPHMTILQNTSLGPELLGWPEQERKEKALELLKLVGLE-EYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAF 157 (363)
T ss_pred -CcCCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 4677889999999875431 1 134578899999994 6789999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 572 NHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 572 ~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
++||+.++..+++.+.+. +.|||+||||++++..+||||++|++|+++. .|..+++.
T Consensus 158 saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~-~g~~~ei~ 218 (363)
T TIGR01186 158 SALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQ-VGTPDEIL 218 (363)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEe-eCCHHHHH
Confidence 999999999999988753 5699999999999999999999999999985 46666654
No 355
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-39 Score=331.34 Aligned_cols=208 Identities=18% Similarity=0.257 Sum_probs=167.3
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~----------- 160 (645)
.|+++|++++|++.++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 7 ~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 86 (259)
T PRK14260 7 AIKVKDLSFYYNTSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRL 86 (259)
T ss_pred eEEEEEEEEEECCeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhh
Confidence 59999999999888899999999999999999999999999999999999985 48999987642
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..|+|++|++.+++ .|+.||+...+... . ..+....++.+
T Consensus 87 ~~~i~~v~q~~~l~~-~tv~enl~~~~~~~---------------~-----------------------~~~~~~~~~~~ 127 (259)
T PRK14260 87 RRQIGMVFQRPNPFP-MSIYENVAYGVRIS---------------A-----------------------KLPQADLDEIV 127 (259)
T ss_pred hhheEEEecccccCC-ccHHHHHHHHHHHh---------------c-----------------------CCCHHHHHHHH
Confidence 25999999988765 89999985322100 0 00001112234
Q ss_pred HhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006442 240 SKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (645)
Q Consensus 240 ~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (645)
.+++..+|+. ....++.+.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|++ .++|||++||
T Consensus 128 ~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH 207 (259)
T PRK14260 128 ESALKGAALWQEVKDKLNKSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTH 207 (259)
T ss_pred HHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 4455555552 1356778899999999999999999999999999999999999999999988753 3689999999
Q ss_pred CHHHHHhhcCeEEEEc-----CceeEEeccChHHH
Q 006442 315 DRAFLDQLCTKIVETE-----MGVSRTYEGNYSQY 344 (645)
Q Consensus 315 d~~~l~~~~d~i~~l~-----~G~~~~~~g~~~~~ 344 (645)
+++++.++||++++++ +|++. ..|+..++
T Consensus 208 ~~~~i~~~~d~i~~l~~~~~~~G~i~-~~~~~~~~ 241 (259)
T PRK14260 208 NMQQATRVSDFTAFFSTDESRIGQMV-EFGVTTQI 241 (259)
T ss_pred CHHHHHHhcCeEEEEeccCCCCceEE-EeCCHHHH
Confidence 9999999999999997 48874 45655443
No 356
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-39 Score=328.86 Aligned_cols=203 Identities=19% Similarity=0.257 Sum_probs=171.0
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------cc
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~ 491 (645)
++|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 83 (237)
T PRK11614 4 VMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVA 83 (237)
T ss_pred cEEEEEeEEEeeCCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEE
Confidence 4799999999998888999999999999999999999999999999999999999999999998652 12
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhccc----cHHHHHHHHhhc-CCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEE
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAEDW----RIDDIKGLLGRC-NFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~~----~~~~~~~~L~~~-~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 566 (645)
|+.|+ ..+++..|+.+|+....... ....+..+++.+ ++ .+..++++.+|||||||||+|||||+.+|++||
T Consensus 84 ~~~q~--~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l-~~~~~~~~~~LS~G~~qrl~la~al~~~p~ill 160 (237)
T PRK11614 84 IVPEG--RRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRL-HERRIQRAGTMSGGEQQMLAIGRALMSQPRLLL 160 (237)
T ss_pred EeccC--cccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHH-HHHHhCchhhCCHHHHHHHHHHHHHHhCCCEEE
Confidence 33443 34556689999997642111 122355666766 35 355678899999999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 567 LDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 567 LDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||||++||+.+++.+.+.|+++ +.|||++|||++++.++|||+++|++|++.. .|+.++..
T Consensus 161 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 225 (237)
T PRK11614 161 LDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVL-EDTGDALL 225 (237)
T ss_pred EcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEe-eCCHHHHh
Confidence 99999999999999999998764 4699999999999999999999999999985 57776654
No 357
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-39 Score=329.68 Aligned_cols=204 Identities=25% Similarity=0.353 Sum_probs=173.6
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CeeEEEECceecc---------
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~--------- 489 (645)
+|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 3 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 82 (250)
T PRK14247 3 KIEIRDLKVSFGQVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRR 82 (250)
T ss_pred eEEEEeeEEEECCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhc
Confidence 58999999999888899999999999999999999999999999999999974 6999999998752
Q ss_pred -cchhccchhhcCCCCCCHHHHHHhhhc--cc--c----HHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHHHHH
Q 006442 490 -PNYFEQNQAEALDLDKTVLETVAEAAE--DW--R----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCKF 557 (645)
Q Consensus 490 -~~~~~q~~~~~l~~~~tv~e~v~~~~~--~~--~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~lAra 557 (645)
.+|++|+ ..+.+..|+.+|+..... .. . .+.+.++++.+++.. +..++++.+|||||||||+||||
T Consensus 83 ~i~~v~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~lara 160 (250)
T PRK14247 83 RVQMVFQI--PNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIARA 160 (250)
T ss_pred cEEEEecc--CccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHHHHHH
Confidence 2344544 345567899999975421 10 1 234678899999842 34688999999999999999999
Q ss_pred HccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 558 l~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|+.+|++|||||||++||+.++..+.+.|++. +.|||+||||++++.++||++++|++|++.. .|+.+++..
T Consensus 161 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 234 (250)
T PRK14247 161 LAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVE-WGPTREVFT 234 (250)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEE-ECCHHHHHc
Confidence 99999999999999999999999999999875 3699999999999999999999999999975 477776643
No 358
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-39 Score=330.38 Aligned_cols=204 Identities=25% Similarity=0.329 Sum_probs=172.2
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CeeEEEECceecc--------
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL-------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~-------- 489 (645)
.+|+++|+++.|+++++|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 82 (253)
T PRK14267 3 FAIETVNLRVYYGSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIE 82 (253)
T ss_pred ceEEEEeEEEEeCCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHH
Confidence 369999999999888899999999999999999999999999999999999987 4999999998753
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhc--cc--c----HHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHH
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAE--DW--R----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAF 554 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~--~~--~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~l 554 (645)
.+|++|+ ..+.+..|+.+|+..... .. . ...+..+++.+++.. ...++++.+||||||||++|
T Consensus 83 ~~~~i~~~~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 160 (253)
T PRK14267 83 VRREVGMVFQY--PNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRLVI 160 (253)
T ss_pred HhhceeEEecC--CccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHHHHHH
Confidence 1234443 345567899999976431 10 1 134667888888742 34688999999999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++.. .|+.+++.
T Consensus 161 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 236 (253)
T PRK14267 161 ARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIE-VGPTRKVF 236 (253)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999999875 3699999999999999999999999999985 46666654
No 359
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-39 Score=333.15 Aligned_cols=210 Identities=20% Similarity=0.286 Sum_probs=168.3
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC---------
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~--------- 160 (645)
.++|+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 23 ~~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~ 102 (272)
T PRK14236 23 QTALEVRNLNLFYGDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVA 102 (272)
T ss_pred CcEEEEEEEEEEECCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHH
Confidence 346999999999988889999999999999999999999999999999999987 489999987632
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..++|++|++.++.. |+.||+...+... .. ......++
T Consensus 103 ~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~---------------~~-----------------------~~~~~~~~ 143 (272)
T PRK14236 103 ELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQ---------------GI-----------------------NNRRVLDE 143 (272)
T ss_pred HHhccEEEEecCCccCcc-cHHHHHHHHHHhc---------------CC-----------------------CcHHHHHH
Confidence 259999999887664 9999985321100 00 00001122
Q ss_pred HHHhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006442 238 KVSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (645)
Q Consensus 238 ~i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (645)
++.++++.+++.. ...++.+.+|||||||||+|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||++
T Consensus 144 ~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiiv 223 (272)
T PRK14236 144 AVERSLRGAALWDEVKDRLHENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIV 223 (272)
T ss_pred HHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEE
Confidence 3344455555532 245677899999999999999999999999999999999999999999988753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 313 SHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
||+++++.++||+|+++++|++. ..|..+++
T Consensus 224 tH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 254 (272)
T PRK14236 224 THNMQQAARVSDYTAFMYMGKLV-EYGDTDTL 254 (272)
T ss_pred eCCHHHHHhhCCEEEEEECCEEE-ecCCHHHH
Confidence 99999999999999999999974 44655443
No 360
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.1e-40 Score=300.55 Aligned_cols=197 Identities=27% Similarity=0.444 Sum_probs=169.7
Q ss_pred cEEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------------
Q 006442 97 GVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------ 160 (645)
Q Consensus 97 ~i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------ 160 (645)
.|+++++++..+. ..+|++|+|.|++||.++||||+||||||||-+++|+..|++|+|++.|..
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 5899999999864 359999999999999999999999999999999999999999999997753
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
.+||||+|.+.+.+++|..||++.... +.. -........
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPle---------------L~g------------------------e~~~~~~~~ 126 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLE---------------LRG------------------------ESSADSRAG 126 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhh---------------hcC------------------------CccccHHHH
Confidence 369999999999999999999863211 000 001123345
Q ss_pred HHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH----ccCCCeEEEEec
Q 006442 239 VSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL----GKQDVPMVIISH 314 (645)
Q Consensus 239 i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L----~~~g~tvIivsH 314 (645)
..++|..+|+. .-++.++.+|||||+|||+||||++..|+||+.||||-+||.++-+.+.++| ++.|.|.|+|||
T Consensus 127 A~~lL~~vGLg-~Rl~HyP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTH 205 (228)
T COG4181 127 AKALLEAVGLG-KRLTHYPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTH 205 (228)
T ss_pred HHHHHHHhCcc-cccccCccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeC
Confidence 66788999997 5667789999999999999999999999999999999999999998888876 567999999999
Q ss_pred CHHHHHhhcCeEEEEcCcee
Q 006442 315 DRAFLDQLCTKIVETEMGVS 334 (645)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~ 334 (645)
|...+.+ |+|++-|.+|++
T Consensus 206 D~~LA~R-c~R~~r~~~G~l 224 (228)
T COG4181 206 DPQLAAR-CDRQLRLRSGRL 224 (228)
T ss_pred CHHHHHh-hhheeeeeccee
Confidence 9999987 999999999986
No 361
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-39 Score=326.52 Aligned_cols=201 Identities=28% Similarity=0.441 Sum_probs=172.6
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhcc
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQ 495 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~q 495 (645)
+|+++|++++|+++. .++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 1 ~l~~~~l~~~~~~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 78 (232)
T PRK10771 1 MLKLTDITWLYHHLP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQ 78 (232)
T ss_pred CeEEEEEEEEECCcc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEec
Confidence 478999999997643 4999999999999999999999999999999999999999999998652 234454
Q ss_pred chhhcCCCCCCHHHHHHhhhc-c-----ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeC
Q 006442 496 NQAEALDLDKTVLETVAEAAE-D-----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~~-~-----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 569 (645)
+ ..+.+..|+.+|+..... . ....++.++++.+++. +..++++..||||||||++||||++.+|++|||||
T Consensus 79 ~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDE 155 (232)
T PRK10771 79 E--NNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIE-DLLARLPGQLSGGQRQRVALARCLVREQPILLLDE 155 (232)
T ss_pred c--cccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcH-HHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 4 345667899999975421 1 1234578899999994 67899999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 570 Pt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
||++||+.+++.+.+.|.+. +.|||+||||++++.++||++++|++|++.. .|+.+++..
T Consensus 156 P~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~-~g~~~~~~~ 219 (232)
T PRK10771 156 PFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAW-DGPTDELLS 219 (232)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-eCCHHHHHh
Confidence 99999999999999988754 4599999999999999999999999999984 578777764
No 362
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-40 Score=328.23 Aligned_cols=210 Identities=25% Similarity=0.376 Sum_probs=181.2
Q ss_pred cEEEEeEEEEeCCe------------------------eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCcc
Q 006442 97 GVKLENISKSYKGV------------------------TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSG 152 (645)
Q Consensus 97 ~i~i~nls~~y~~~------------------------~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G 152 (645)
.|+++|+++-|+.+ .-++|+||+|++||+..|.|-+|||||||+|+|.++++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 48999999999641 257899999999999999999999999999999999999999
Q ss_pred EEEEcCCC--------------ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHH
Q 006442 153 NVIKAKSN--------------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLD 218 (645)
Q Consensus 153 ~I~~~~~~--------------~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (645)
+|.++|.+ .++++|||.+.++|..||.||+..++.
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLe------------------------------- 132 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLE------------------------------- 132 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhccee-------------------------------
Confidence 99998764 269999999999999999999864321
Q ss_pred HHHHHHHHHHhCChhcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHH
Q 006442 219 EFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWL 298 (645)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l 298 (645)
...++..+-+++..+.|+.+|+. .+.++++.+|||||||||.|||||+.+|+|||+|||||+|||--+..+
T Consensus 133 --------v~Gv~~~er~~~a~~~l~~VgL~-~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~m 203 (386)
T COG4175 133 --------VQGVPKAEREERALEALELVGLE-GYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEM 203 (386)
T ss_pred --------ecCCCHHHHHHHHHHHHHHcCch-hhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHH
Confidence 01234445567778889999997 688999999999999999999999999999999999999999988888
Q ss_pred HHHH----ccCCCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHHHHHH
Q 006442 299 EGYL----GKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQYVLE 347 (645)
Q Consensus 299 ~~~L----~~~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~~~~ 347 (645)
.+.| ++.++|||+||||++++.++.|||..|++|++ ...|...+.+.+
T Consensus 204 QdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~i-vQ~Gtp~eIl~~ 255 (386)
T COG4175 204 QDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGEI-VQVGTPEEILLN 255 (386)
T ss_pred HHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCCeE-EEeCCHHHHHcC
Confidence 7654 45689999999999999999999999999998 566877665544
No 363
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-39 Score=332.51 Aligned_cols=207 Identities=26% Similarity=0.394 Sum_probs=172.2
Q ss_pred CCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCeeEEEECceecc-----
Q 006442 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL----- 489 (645)
Q Consensus 420 ~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~----- 489 (645)
+++++|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 17 ~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 96 (268)
T PRK14248 17 AKEHILEVKDLSIYYGEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN 96 (268)
T ss_pred CCCceEEEEEEEEEeCCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc
Confidence 34568999999999998889999999999999999999999999999999999864 68999999997652
Q ss_pred -------cchhccchhhcCCCCCCHHHHHHhhhcc----c---cHHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHH
Q 006442 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED----W---RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARL 552 (645)
Q Consensus 490 -------~~~~~q~~~~~l~~~~tv~e~v~~~~~~----~---~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv 552 (645)
.+|++|+ ..+.. .|+.+|+...... . ..+.+...++.+++.. +..++++.+||||||||+
T Consensus 97 ~~~~~~~i~~v~q~--~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl 173 (268)
T PRK14248 97 VVNLRREIGMVFQK--PNPFP-KSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRL 173 (268)
T ss_pred HHHHhccEEEEecC--CccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHH
Confidence 1344443 23333 5999998754211 1 1234567788887742 346789999999999999
Q ss_pred HHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 553 ~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
+|||||+.+|++|||||||+|||+.++..+.+.|+++ +.|||++|||++++.++|||+++|++|+++. .++.+++..
T Consensus 174 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~~ 252 (268)
T PRK14248 174 CIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVE-YDQTEQIFT 252 (268)
T ss_pred HHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEE-eCCHHHHHh
Confidence 9999999999999999999999999999999999876 3599999999999999999999999999985 466666543
No 364
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-39 Score=336.08 Aligned_cols=201 Identities=24% Similarity=0.319 Sum_probs=172.5
Q ss_pred EEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------------cc
Q 006442 426 TIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------PN 491 (645)
Q Consensus 426 ~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------------~~ 491 (645)
.++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 26 ~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~ 105 (269)
T cd03294 26 SKEEILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKIS 105 (269)
T ss_pred hhhhhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEE
Confidence 5679999999999999999999999999999999999999999999999999999999997652 12
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeE
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 565 (645)
|++|. ..+++..|+.+|+...... ...+++.++++.+++. +..++++.+|||||||||+|||||+.+|++|
T Consensus 106 ~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrv~lAral~~~p~il 182 (269)
T cd03294 106 MVFQS--FALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLE-GWEHKYPDELSGGMQQRVGLARALAVDPDIL 182 (269)
T ss_pred EEecC--cccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 34443 3455678999999764311 1124567889999994 6779999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 566 lLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
||||||++||+.+++.+.+.|.++ +.|||++|||++++.++||++++|++|++.. .|..+++.+
T Consensus 183 lLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~~ 250 (269)
T cd03294 183 LMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQ-VGTPEEILT 250 (269)
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE-eCCHHHHHh
Confidence 999999999999999999998765 4699999999999999999999999999985 466666543
No 365
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2e-39 Score=352.34 Aligned_cols=208 Identities=27% Similarity=0.430 Sum_probs=177.5
Q ss_pred CCccEEEEeEEEEeCC-----------eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC--
Q 006442 94 ISSGVKLENISKSYKG-----------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-- 160 (645)
Q Consensus 94 ~~~~i~i~nls~~y~~-----------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-- 160 (645)
..+.++++|+++.|.. ..+++||||+|.+||++||||++|||||||.|+|+|+.+|++|+|.++|..
T Consensus 277 ~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~ 356 (539)
T COG1123 277 AEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLD 356 (539)
T ss_pred cCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccc
Confidence 4667999999999962 258999999999999999999999999999999999999999999998753
Q ss_pred ----------ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHH
Q 006442 161 ----------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQ 228 (645)
Q Consensus 161 ----------~~i~~v~Q~~--~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (645)
.++-+++|+| .+.+..||.+++...+.-. .
T Consensus 357 ~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~--------------------------------------~ 398 (539)
T COG1123 357 LTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIH--------------------------------------G 398 (539)
T ss_pred cccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhh--------------------------------------c
Confidence 3588888988 4567789999875332100 0
Q ss_pred hCChhcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----c
Q 006442 229 AVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----K 304 (645)
Q Consensus 229 ~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~ 304 (645)
.....+.++++.++++.+|++....++++++|||||||||+|||||+.+|++|++|||||+||+.....+.++|+ +
T Consensus 399 ~~~~~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e 478 (539)
T COG1123 399 GGSGAERRARVAELLELVGLPPEFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEE 478 (539)
T ss_pred ccchHHHHHHHHHHHHHcCCCHHHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHH
Confidence 001123345788999999999889999999999999999999999999999999999999999999999988874 4
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccC
Q 006442 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGN 340 (645)
Q Consensus 305 ~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~ 340 (645)
.|.|.|+||||+.++.++||||++|.+|++. -.|+
T Consensus 479 ~g~t~lfISHDl~vV~~i~drv~vm~~G~iV-E~G~ 513 (539)
T COG1123 479 LGLTYLFISHDLAVVRYIADRVAVMYDGRIV-EEGP 513 (539)
T ss_pred hCCEEEEEeCCHHHHHhhCceEEEEECCeEE-EeCC
Confidence 6999999999999999999999999999984 3454
No 366
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=345.36 Aligned_cols=200 Identities=27% Similarity=0.408 Sum_probs=172.7
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------------
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------------- 489 (645)
||++ |++++|+++.+ ++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 1 ~l~~-~l~k~~~~~~~--~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~ 77 (352)
T PRK11144 1 MLEL-NFKQQLGDLCL--TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKRR 77 (352)
T ss_pred CeEE-EEEEEeCCEEE--EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhCC
Confidence 4777 99999987543 899999999999999999999999999999999999999999997652
Q ss_pred cchhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeC
Q 006442 490 PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (645)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 569 (645)
.+|++|+ ..+++.+|+.+|+.+........++.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||
T Consensus 78 i~~v~q~--~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qRvalaraL~~~p~llLLDE 154 (352)
T PRK11144 78 IGYVFQD--ARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIE-PLLDRYPGSLSGGEKQRVAIGRALLTAPELLLMDE 154 (352)
T ss_pred EEEEcCC--cccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCc-hhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 1244443 45667899999998764433445688899999995 67899999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 570 PTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 570 Pt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++.. .|+.+++..
T Consensus 155 Pts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~-~g~~~~i~~ 218 (352)
T PRK11144 155 PLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKA-FGPLEEVWA 218 (352)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEE-ecCHHHHHh
Confidence 99999999999999988754 4699999999999999999999999999985 466666543
No 367
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.2e-39 Score=322.64 Aligned_cols=193 Identities=23% Similarity=0.411 Sum_probs=167.4
Q ss_pred CCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-------cch
Q 006442 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------PNY 492 (645)
Q Consensus 420 ~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------~~~ 492 (645)
.++++|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 7 ~~~~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~~~~~~i~~ 86 (214)
T PRK13543 7 TAPPLLAAHALAFSRNEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRGDRSRFMAY 86 (214)
T ss_pred CCcceEEEeeEEEecCCceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccchhhhhceEE
Confidence 3456899999999998888999999999999999999999999999999999999999999999997653 234
Q ss_pred hccchhhcCCCCCCHHHHHHhhhc---cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeC
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAE---DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~---~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 569 (645)
+.|+ +.+....|+.+|+..... ....+.+.++++.+++. +..++++..|||||||||+||||++.+|++|||||
T Consensus 87 ~~q~--~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral~~~p~llllDE 163 (214)
T PRK13543 87 LGHL--PGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLA-GYEDTLVRQLSAGQKKRLALARLWLSPAPLWLLDE 163 (214)
T ss_pred eecC--cccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCCh-hhccCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 4443 345566799999875432 11234567889999995 56789999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeC
Q 006442 570 PTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKG 615 (645)
Q Consensus 570 Pt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~ 615 (645)
||++||+.+++.+.+.|.++ +.|||++|||++++.++||++++++.
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 164 PYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 99999999999999999765 57999999999999999999999864
No 368
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-39 Score=329.00 Aligned_cols=207 Identities=19% Similarity=0.292 Sum_probs=166.8
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC------------
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN------------ 160 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~------------ 160 (645)
-+++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+.+ |++|+|.++|..
T Consensus 6 ~~~~~l~~~~~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 85 (251)
T PRK14244 6 ASVKNLNLWYGSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLR 85 (251)
T ss_pred EEeeeEEEEECCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHh
Confidence 478999999998889999999999999999999999999999999999986 479999987632
Q ss_pred ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHH
Q 006442 161 MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVS 240 (645)
Q Consensus 161 ~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (645)
..++|++|++.+++ .|+.+|+...... .... ......+..+.
T Consensus 86 ~~i~~v~q~~~~~~-~tv~~ni~~~~~~---------------~~~~----------------------~~~~~~~~~~~ 127 (251)
T PRK14244 86 AKVGMVFQKPNPFP-KSIYDNVAYGPKL---------------HGLA----------------------KNKKKLDEIVE 127 (251)
T ss_pred hhEEEEecCccccc-CCHHHHHHHHHHh---------------cCCC----------------------CCHHHHHHHHH
Confidence 25999999987765 4999998522100 0000 00011223455
Q ss_pred hhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecC
Q 006442 241 KLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHD 315 (645)
Q Consensus 241 ~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd 315 (645)
++++.+|+.. ...++.+.+||||||||++|||||+.+|++|||||||++||+.+++.+.+.|++ .++|||++||+
T Consensus 128 ~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~ 207 (251)
T PRK14244 128 KSLTSVGLWEELGDRLKDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHS 207 (251)
T ss_pred HHHHHcCCCchhhhHhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 6677777743 235677899999999999999999999999999999999999999999888753 47899999999
Q ss_pred HHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 316 RAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 316 ~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
++++.++||+++++++|++. ..|...+
T Consensus 208 ~~~~~~~~d~i~~l~~G~i~-~~~~~~~ 234 (251)
T PRK14244 208 MKQAKKVSDRVAFFQSGRIV-EYNTTQE 234 (251)
T ss_pred HHHHHhhcCEEEEEECCEEE-EeCCHHH
Confidence 99999999999999999984 4455443
No 369
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.8e-39 Score=325.79 Aligned_cols=201 Identities=29% Similarity=0.485 Sum_probs=154.3
Q ss_pred EEEEeEEEEeCC--eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEE
Q 006442 98 VKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (645)
Q Consensus 98 i~i~nls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~ 165 (645)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|.. ..++|
T Consensus 3 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (220)
T cd03245 3 IEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIGY 82 (220)
T ss_pred EEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEEE
Confidence 899999999975 569999999999999999999999999999999999999999999998742 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.+++ .|+.||+....... . ...+...+ +.+ .+...+.....
T Consensus 83 ~~q~~~~~~-~tv~e~l~~~~~~~-~----~~~~~~~l--------------~~~-------------~l~~~~~~~~~- 128 (220)
T cd03245 83 VPQDVTLFY-GTLRDNITLGAPLA-D----DERILRAA--------------ELA-------------GVTDFVNKHPN- 128 (220)
T ss_pred eCCCCcccc-chHHHHhhcCCCCC-C----HHHHHHHH--------------HHc-------------CcHHHHHhccc-
Confidence 999998765 69999985321100 0 00000000 000 01111111100
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhc
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~ 323 (645)
|+... ....+.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|++ .+.|||++||+++++ ++|
T Consensus 129 -~~~~~-~~~~~~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~-~~~ 205 (220)
T cd03245 129 -GLDLQ-IGERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLL-DLV 205 (220)
T ss_pred -cccce-ecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HhC
Confidence 22111 2334689999999999999999999999999999999999999999998854 247999999999987 699
Q ss_pred CeEEEEcCceeE
Q 006442 324 TKIVETEMGVSR 335 (645)
Q Consensus 324 d~i~~l~~G~~~ 335 (645)
|+++++++|++.
T Consensus 206 d~v~~l~~g~i~ 217 (220)
T cd03245 206 DRIIVMDSGRIV 217 (220)
T ss_pred CEEEEEeCCeEe
Confidence 999999999873
No 370
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-39 Score=329.91 Aligned_cols=205 Identities=27% Similarity=0.385 Sum_probs=172.1
Q ss_pred CCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCeeEEEECceecc------
Q 006442 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL------ 489 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~------ 489 (645)
...+|+++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 10 ~~~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~ 89 (260)
T PRK10744 10 APSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDI 89 (260)
T ss_pred CCceEEEEEEEEEeCCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccch
Confidence 3456999999999998889999999999999999999999999999999999986 58999999997752
Q ss_pred ------cchhccchhhcCCCCCCHHHHHHhhhcc---cc----HHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHHH
Q 006442 490 ------PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLA 553 (645)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~ 553 (645)
.+|++|+. .+. ..|+.+|+...... .. .+++.++++.+++. .+..++.+.+||||||||++
T Consensus 90 ~~~~~~i~~~~q~~--~~~-~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~ 166 (260)
T PRK10744 90 ALLRAKVGMVFQKP--TPF-PMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRLC 166 (260)
T ss_pred HHHhcceEEEecCC--ccC-cCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHHH
Confidence 12444442 343 37999999764321 11 23567888988873 24568889999999999999
Q ss_pred HHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 554 FCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 554 lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||||+.+|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|++... ++.+++.
T Consensus 167 laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~-g~~~~~~ 243 (260)
T PRK10744 167 IARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEF-GNTDTIF 243 (260)
T ss_pred HHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEe-CCHHHHH
Confidence 999999999999999999999999999999999876 35999999999999999999999999999864 6666554
No 371
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-39 Score=364.35 Aligned_cols=207 Identities=31% Similarity=0.544 Sum_probs=179.0
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCc--c
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFE--V 172 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~--~ 172 (645)
..+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..+||++|++. +
T Consensus 317 ~~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~-~~i~~~~q~~~~~~ 395 (530)
T PRK15064 317 RNALEVENLTKGFDNGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSEN-ANIGYYAQDHAYDF 395 (530)
T ss_pred CceEEEEeeEEeeCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCc-eEEEEEcccccccC
Confidence 34799999999998888999999999999999999999999999999999999999999999863 57999999974 3
Q ss_pred CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCccc
Q 006442 173 SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADD 252 (645)
Q Consensus 173 ~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~ 252 (645)
....|+.+|+... .. ....++++.++++.+|+..+.
T Consensus 396 ~~~~t~~~~~~~~-~~-------------------------------------------~~~~~~~~~~~l~~~~l~~~~ 431 (530)
T PRK15064 396 ENDLTLFDWMSQW-RQ-------------------------------------------EGDDEQAVRGTLGRLLFSQDD 431 (530)
T ss_pred CCCCcHHHHHHHh-cc-------------------------------------------CCccHHHHHHHHHHcCCChhH
Confidence 4467998886310 00 001123456778888885457
Q ss_pred ccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCc
Q 006442 253 GDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMG 332 (645)
Q Consensus 253 ~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~i~~l~~G 332 (645)
.++++.+|||||||||+|||||+.+|+||||||||+|||+.+++++.++|++.+.|||+||||++++..+||+++++++|
T Consensus 432 ~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~g 511 (530)
T PRK15064 432 IKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKYEGTLIFVSHDREFVSSLATRIIEITPD 511 (530)
T ss_pred hcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 78999999999999999999999999999999999999999999999999887789999999999999999999999999
Q ss_pred eeEEeccChHHHHH
Q 006442 333 VSRTYEGNYSQYVL 346 (645)
Q Consensus 333 ~~~~~~g~~~~~~~ 346 (645)
++..+.|++.++..
T Consensus 512 ~i~~~~g~~~~~~~ 525 (530)
T PRK15064 512 GVVDFSGTYEEYLR 525 (530)
T ss_pred eEEEcCCCHHHHHH
Confidence 98668888876643
No 372
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=3.6e-39 Score=330.29 Aligned_cols=213 Identities=20% Similarity=0.278 Sum_probs=171.0
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcC--CCCCccEEEEcCCC-----------ce
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQ--EEPDSGNVIKAKSN-----------MK 162 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~--~~p~~G~I~~~~~~-----------~~ 162 (645)
++|+++|++++|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+ ++|++|+|.++|.. ..
T Consensus 6 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 85 (252)
T CHL00131 6 PILEIKNLHASVNENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHLG 85 (252)
T ss_pred ceEEEEeEEEEeCCEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhheee
Confidence 369999999999888899999999999999999999999999999999998 58999999987632 14
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
++|++|++.+++..|+.+|+...+.... ..... . .........++.++
T Consensus 86 ~~~~~q~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~-~--------------------~~~~~~~~~~~~~~ 133 (252)
T CHL00131 86 IFLAFQYPIEIPGVSNADFLRLAYNSKR-----------KFQGL-P--------------------ELDPLEFLEIINEK 133 (252)
T ss_pred EEEEeccccccccccHHHHHHHhhhhhh-----------ccccc-c--------------------cccHHHHHHHHHHH
Confidence 8899999888777899888743211000 00000 0 00111223456677
Q ss_pred chhcCCCcccccccCC-CCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHH
Q 006442 243 MPELGFTADDGDRLVA-SFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAF 318 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~-~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~ 318 (645)
+..+|+.....++++. .|||||||||+|||||+.+|+||||||||+|||+.++.++.++|+ +.|.|||++|||+++
T Consensus 134 l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~ 213 (252)
T CHL00131 134 LKLVGMDPSFLSRNVNEGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL 213 (252)
T ss_pred HHHcCCchhhhccccccCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH
Confidence 8888886445677776 599999999999999999999999999999999999999998775 358999999999999
Q ss_pred HHhh-cCeEEEEcCceeEEeccCh
Q 006442 319 LDQL-CTKIVETEMGVSRTYEGNY 341 (645)
Q Consensus 319 l~~~-~d~i~~l~~G~~~~~~g~~ 341 (645)
+..+ ||+++++++|++. +.|+.
T Consensus 214 ~~~~~~d~i~~l~~G~i~-~~~~~ 236 (252)
T CHL00131 214 LDYIKPDYVHVMQNGKII-KTGDA 236 (252)
T ss_pred HHhhhCCEEEEEeCCEEE-EecCh
Confidence 9887 8999999999883 55554
No 373
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-39 Score=333.76 Aligned_cols=202 Identities=25% Similarity=0.355 Sum_probs=170.2
Q ss_pred EEEEEeeeeeeC-CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------cc
Q 006442 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (645)
Q Consensus 424 ~i~~~~v~~~y~-~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~ 491 (645)
+|+++|++++|+ ++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 1 ml~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 1 MIRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred CEEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 478999999995 467999999999999999999999999999999999999999999999998752 13
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhccc------cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeE
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 565 (645)
|++|+... ..+..|+.+|+......+ ..+.+..+++.+++. +..++++..|||||||||+|||||+.+|+||
T Consensus 81 ~v~q~~~~-~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~laral~~~p~ll 158 (274)
T PRK13644 81 IVFQNPET-QFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLE-KYRHRSPKTLSGGQGQCVALAGILTMEPECL 158 (274)
T ss_pred EEEEChhh-hcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCH-HHhcCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 44444221 234679999997643211 123567889999994 6778999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 566 lLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||||++||+.++..+.+.|+++ +.|||++|||++.+. .|||+++|++|++.. .|+.+++.
T Consensus 159 lLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~-~~d~v~~l~~G~i~~-~g~~~~~~ 223 (274)
T PRK13644 159 IFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELH-DADRIIVMDRGKIVL-EGEPENVL 223 (274)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHh-hCCEEEEEECCEEEE-ECCHHHHh
Confidence 999999999999999999999754 469999999999995 599999999999985 46666553
No 374
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-40 Score=305.66 Aligned_cols=209 Identities=24% Similarity=0.423 Sum_probs=179.8
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------------
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--------------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--------------- 160 (645)
+.|+++|+.|+||...+|++|||+-++|+++.|||.+||||||+||||.=+..|+.|.|.++|..
T Consensus 5 ~~l~v~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ad 84 (256)
T COG4598 5 NALEVEDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPAD 84 (256)
T ss_pred cceehhHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeCC
Confidence 45999999999999999999999999999999999999999999999999999999999987631
Q ss_pred --------ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCCh
Q 006442 161 --------MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (645)
Q Consensus 161 --------~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (645)
.+.++|+|+++++..+||.||++.+--.- -.+..
T Consensus 85 ~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhV--------------------------------------Lg~~k 126 (256)
T COG4598 85 KRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHV--------------------------------------LGVSK 126 (256)
T ss_pred HHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHh--------------------------------------hcCCH
Confidence 24899999999999999999986431110 01233
Q ss_pred hcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH---ccCCCeE
Q 006442 233 DTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYL---GKQDVPM 309 (645)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L---~~~g~tv 309 (645)
.+..++...+|.++|+. +..+.++..|||||+||++|||||+.+|+++|+|||||+|||+-...+.+.+ .+.|+|+
T Consensus 127 ~ea~e~Ae~~L~kVGi~-ek~~~YP~~LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTM 205 (256)
T COG4598 127 AEAIERAEKYLAKVGIA-EKADAYPAHLSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTM 205 (256)
T ss_pred HHHHHHHHHHHHHhCch-hhhhcCccccCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeE
Confidence 34456677889999997 6778999999999999999999999999999999999999999888777654 5679999
Q ss_pred EEEecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 310 VIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 310 IivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
++|||.+.|+.+++++++++.+|.+ .-.|...+.
T Consensus 206 v~VTHEM~FAR~Vss~v~fLh~G~i-EE~G~P~qv 239 (256)
T COG4598 206 VVVTHEMGFARDVSSHVIFLHQGKI-EEEGPPEQV 239 (256)
T ss_pred EEEeeehhHHHhhhhheEEeeccee-cccCChHHH
Confidence 9999999999999999999999987 445665443
No 375
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-39 Score=369.17 Aligned_cols=211 Identities=21% Similarity=0.348 Sum_probs=176.2
Q ss_pred CccEEEEeEEEEeCC-----------eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---
Q 006442 95 SSGVKLENISKSYKG-----------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~~-----------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--- 160 (645)
.++|+++|+++.|+. ..+|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|..
T Consensus 311 ~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~ 390 (623)
T PRK10261 311 EPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDT 390 (623)
T ss_pred CceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCc
Confidence 357999999999961 469999999999999999999999999999999999999999999997642
Q ss_pred ----------ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHH
Q 006442 161 ----------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQ 228 (645)
Q Consensus 161 ----------~~i~~v~Q~~--~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (645)
..|+|++|++ .+++..||.+|+...+.. ..
T Consensus 391 ~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~---------------~~----------------------- 432 (623)
T PRK10261 391 LSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRV---------------HG----------------------- 432 (623)
T ss_pred CCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHH---------------cC-----------------------
Confidence 2599999997 466788999998532100 00
Q ss_pred hCChhcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----c
Q 006442 229 AVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----K 304 (645)
Q Consensus 229 ~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~ 304 (645)
........+++.++|+.+|+.....++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.++|+ +
T Consensus 433 ~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~ 512 (623)
T PRK10261 433 LLPGKAAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRD 512 (623)
T ss_pred CCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh
Confidence 000112235677889999996557889999999999999999999999999999999999999999999998873 3
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 305 ~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
.|.|||+||||++++..+||+|++|++|++. ..|...+.
T Consensus 513 ~g~tvi~isHdl~~v~~~~dri~vl~~G~iv-~~g~~~~i 551 (623)
T PRK10261 513 FGIAYLFISHDMAVVERISHRVAVMYLGQIV-EIGPRRAV 551 (623)
T ss_pred cCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EecCHHHH
Confidence 5899999999999999999999999999984 45654443
No 376
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-39 Score=330.64 Aligned_cols=208 Identities=18% Similarity=0.270 Sum_probs=163.5
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC---------
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN--------- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~--------- 160 (645)
.++|+++|++++|++.++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|..
T Consensus 8 ~~~l~i~~v~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 8 ETVLRTENLNVYYGSFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred ceEEEEeeeEEEECCEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 447999999999998889999999999999999999999999999999999976 489999987642
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..|+|++|++.+++ .|+.+|+....... .. . ....+
T Consensus 88 ~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~-~~-----------~----------------------------~~~~~ 126 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFP-KSIYDNIAYGARIN-GY-----------K----------------------------GDMDE 126 (264)
T ss_pred HHhhhEEEEccCCcccc-ccHHHHHHhhhhhc-Cc-----------c----------------------------hHHHH
Confidence 24999999987765 59999985321100 00 0 00011
Q ss_pred HHHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006442 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (645)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (645)
++.+++..+++. ....++.+.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++
T Consensus 127 ~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~v 206 (264)
T PRK14243 127 LVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIV 206 (264)
T ss_pred HHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 122223333331 1234677899999999999999999999999999999999999999999988753 35899999
Q ss_pred ecCHHHHHhhcCeEEEEc---------CceeEEeccChHHH
Q 006442 313 SHDRAFLDQLCTKIVETE---------MGVSRTYEGNYSQY 344 (645)
Q Consensus 313 sHd~~~l~~~~d~i~~l~---------~G~~~~~~g~~~~~ 344 (645)
||+++++.++||++++++ +|++. ..|...+.
T Consensus 207 tH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~-~~~~~~~~ 246 (264)
T PRK14243 207 THNMQQAARVSDMTAFFNVELTEGGGRYGYLV-EFDRTEKI 246 (264)
T ss_pred ecCHHHHHHhCCEEEEEecccccccccCceEE-EeCCHHHH
Confidence 999999999999999998 68773 44554443
No 377
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-39 Score=328.23 Aligned_cols=208 Identities=22% Similarity=0.287 Sum_probs=166.2
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC--C---CccEEEEcCCC----------
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE--P---DSGNVIKAKSN---------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~--p---~~G~I~~~~~~---------- 160 (645)
++|+++|++|+|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+.+ | ++|+|.++|.+
T Consensus 5 ~~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 84 (253)
T PRK14261 5 IILSTKNLNLWYGEKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVA 84 (253)
T ss_pred ceEEEeeeEEEECCeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhh
Confidence 46999999999998889999999999999999999999999999999999875 3 48999987632
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
..|+|++|++.++. .||+||+...... ... .+....+..
T Consensus 85 ~~~~i~~~~q~~~~~~-~tv~eni~~~~~~---------------~~~-----------------------~~~~~~~~~ 125 (253)
T PRK14261 85 LRRKIGMVFQRPNPFP-KSIYENVAYGPRI---------------HGE-----------------------KNKKTLDTI 125 (253)
T ss_pred hhceEEEEecCCccCc-ccHHHHHHhhHHh---------------cCC-----------------------CCHHHHHHH
Confidence 24999999988765 5999998532100 000 000111223
Q ss_pred HHhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006442 239 VSKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (645)
Q Consensus 239 i~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (645)
+.++++.+++.. ...++.+.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .++|||++|
T Consensus 126 ~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~s 205 (253)
T PRK14261 126 VEKSLKGAALWDEVKDRLHDSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVT 205 (253)
T ss_pred HHHHHHHhcCchhhHHHhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEE
Confidence 444455555421 235678899999999999999999999999999999999999999999888753 368999999
Q ss_pred cCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 314 HDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
|+++++..+||+++++++|++. ..|...+
T Consensus 206 h~~~~~~~~~d~v~~l~~G~i~-~~g~~~~ 234 (253)
T PRK14261 206 HNMQQAARVSDYTGFMYLGKLI-EFDKTTQ 234 (253)
T ss_pred cCHHHHHhhCCEEEEEECCEEE-EcCCHHH
Confidence 9999999999999999999984 4455443
No 378
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.6e-39 Score=326.24 Aligned_cols=207 Identities=22% Similarity=0.386 Sum_probs=172.3
Q ss_pred EEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-C----CccEEEEcCCC--------
Q 006442 98 VKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-P----DSGNVIKAKSN-------- 160 (645)
Q Consensus 98 i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-p----~~G~I~~~~~~-------- 160 (645)
++++|++.+|.. .++++||||+|++||++||||.+||||||+.++|.|+++ | .+|+|.++|.+
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 789999999953 469999999999999999999999999999999999998 4 47899998752
Q ss_pred ------ceEEEEeccCc--cCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhC-C
Q 006442 161 ------MKIAFLSQEFE--VSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAV-N 231 (645)
Q Consensus 161 ------~~i~~v~Q~~~--~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 231 (645)
..|+|+||+|. +.+..||.+.+...+... ... .
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h--------------------------------------~~~~~ 123 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLH--------------------------------------GKGLS 123 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHh--------------------------------------hcchh
Confidence 36999999983 445667777664322100 000 1
Q ss_pred hhcHHHHHHhhchhcCCCcc--cccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----cC
Q 006442 232 LDTLDAKVSKLMPELGFTAD--DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----KQ 305 (645)
Q Consensus 232 ~~~~~~~i~~ll~~lgl~~~--~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~~ 305 (645)
..+..+++.++|+.+|++.. ..+.++++|||||||||.||.||+.+|++||.||||++||+....++.++|+ +.
T Consensus 124 ~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~ 203 (316)
T COG0444 124 KKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREK 203 (316)
T ss_pred hHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhc
Confidence 22345678889999999865 7899999999999999999999999999999999999999999999988774 47
Q ss_pred CCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 306 DVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 306 g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
|.++|+||||+..+.++||||++|..|++.. .|+..+
T Consensus 204 ~~aiilITHDl~vva~~aDri~VMYaG~iVE-~g~~~~ 240 (316)
T COG0444 204 GTALILITHDLGVVAEIADRVAVMYAGRIVE-EGPVEE 240 (316)
T ss_pred CCEEEEEeCCHHHHHHhcceEEEEECcEEEE-eCCHHH
Confidence 9999999999999999999999999999853 455433
No 379
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-39 Score=328.99 Aligned_cols=208 Identities=21% Similarity=0.262 Sum_probs=168.3
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCC-----ccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPD-----SGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~-----~G~I~~~~~~----------- 160 (645)
.|+++|++++|++..+|+|+||+|++|++++|+|+||||||||+++|+|+++|+ +|+|.++|.+
T Consensus 7 ~l~~~nl~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~ 86 (261)
T PRK14258 7 AIKVNNLSFYYDTQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRL 86 (261)
T ss_pred eEEEeeEEEEeCCeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHh
Confidence 599999999998888999999999999999999999999999999999999985 8999887632
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..++|++|++.+++ .|+.||+...... ... .+.....+++
T Consensus 87 ~~~i~~~~q~~~l~~-~tv~enl~~~~~~---------------~~~-----------------------~~~~~~~~~~ 127 (261)
T PRK14258 87 RRQVSMVHPKPNLFP-MSVYDNVAYGVKI---------------VGW-----------------------RPKLEIDDIV 127 (261)
T ss_pred hccEEEEecCCccCc-ccHHHHHHHHHHh---------------cCC-----------------------CcHHHHHHHH
Confidence 24999999988765 8999998532100 000 0000112334
Q ss_pred HhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEE
Q 006442 240 SKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVII 312 (645)
Q Consensus 240 ~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIiv 312 (645)
.++++.+++. .+..++++.+||||||||++|||||+.+|++|||||||++||+.++..+.++|++ .+.|||+|
T Consensus 128 ~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiiv 207 (261)
T PRK14258 128 ESALKDADLWDEIKHKIHKSALDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIV 207 (261)
T ss_pred HHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 4556666653 1346788899999999999999999999999999999999999999999887753 48999999
Q ss_pred ecCHHHHHhhcCeEEEEcC-----ceeEEeccChHHH
Q 006442 313 SHDRAFLDQLCTKIVETEM-----GVSRTYEGNYSQY 344 (645)
Q Consensus 313 sHd~~~l~~~~d~i~~l~~-----G~~~~~~g~~~~~ 344 (645)
|||++++.++||+|+++++ |++ .+.|...+.
T Consensus 208 sH~~~~i~~~~d~i~~l~~~~~~~G~i-~~~~~~~~~ 243 (261)
T PRK14258 208 SHNLHQVSRLSDFTAFFKGNENRIGQL-VEFGLTKKI 243 (261)
T ss_pred ECCHHHHHHhcCEEEEEccCCCcCceE-EEeCCHHHH
Confidence 9999999999999999999 887 355655443
No 380
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=5.7e-39 Score=331.66 Aligned_cols=203 Identities=25% Similarity=0.450 Sum_probs=171.6
Q ss_pred EEEEEeeeeeeC---------CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----
Q 006442 424 VVTIKNLEFGYE---------DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~---------~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----- 489 (645)
+|+++||++.|+ ++.+|+|+||+|.+||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 689999999997 478999999999999999999999999999999999999999999999998652
Q ss_pred --------cchhccchhhcCCCCCCHHHHHHhhhc---c----ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHH
Q 006442 490 --------PNYFEQNQAEALDLDKTVLETVAEAAE---D----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAF 554 (645)
Q Consensus 490 --------~~~~~q~~~~~l~~~~tv~e~v~~~~~---~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~l 554 (645)
.+|++|+....+.+..++.+++..... . .....+.++++.+++.....++++..||||||||++|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl~l 162 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRVCL 162 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHHHH
Confidence 234455432235566899998754221 1 1123578899999996457789999999999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhH
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQ 627 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~ 627 (645)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|++... |+.++
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~-g~~~~ 238 (268)
T PRK10419 163 ARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVET-QPVGD 238 (268)
T ss_pred HHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeee-CChhh
Confidence 99999999999999999999999999999988754 46999999999999999999999999999753 54444
No 381
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-39 Score=332.69 Aligned_cols=203 Identities=27% Similarity=0.443 Sum_probs=173.2
Q ss_pred cEEEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------c
Q 006442 423 SVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (645)
Q Consensus 423 ~~i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~ 490 (645)
++|+++||++.|++ +++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 4 ~~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 4 EIIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred ceEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 47999999999974 56999999999999999999999999999999999999999999999998763 2
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhccc--c----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCe
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAEDW--R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~~~--~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 564 (645)
+|++|+.. .+.+..|+.+|+....... . ...+..+++.+|+. +..++++..|||||||||+|||||+.+|+|
T Consensus 84 ~~~~q~~~-~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LS~G~~qrv~laral~~~p~l 161 (279)
T PRK13635 84 GMVFQNPD-NQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGME-DFLNREPHRLSGGQKQRVAIAGVLALQPDI 161 (279)
T ss_pred EEEEeCHH-HhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCCh-hhhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 35555432 2445679999997643211 1 23578889999995 678999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 565 LlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||||||++||+.++..+.+.|+++ +.|||+||||++++.. |||+++|++|++.. .|+.+++.
T Consensus 162 llLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~-~d~i~~l~~G~i~~-~g~~~~~~ 228 (279)
T PRK13635 162 IILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQ-ADRVIVMNKGEILE-EGTPEEIF 228 (279)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHc-CCEEEEEECCEEEE-ECCHHHHh
Confidence 9999999999999999999999854 4599999999999975 99999999999975 46666554
No 382
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-39 Score=329.91 Aligned_cols=205 Identities=23% Similarity=0.347 Sum_probs=172.3
Q ss_pred CCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CeeEEEECceecc------
Q 006442 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------ 489 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~------ 489 (645)
..+.|+++|+++.|+++.+|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 16 ~~~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~ 95 (267)
T PRK14235 16 TEIKMRARDVSVFYGEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDV 95 (267)
T ss_pred CCceEEEEeEEEEECCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccch
Confidence 45579999999999988899999999999999999999999999999999999975 8999999997752
Q ss_pred ------cchhccchhhcCCCCCCHHHHHHhhhc--c-----cc-HHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHH
Q 006442 490 ------PNYFEQNQAEALDLDKTVLETVAEAAE--D-----WR-IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARL 552 (645)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~v~~~~~--~-----~~-~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv 552 (645)
.+|++|. ..+.. .|+.+|+..... . .. ..++..+++.+++.. +..++++.+|||||||||
T Consensus 96 ~~~~~~i~~v~q~--~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv 172 (267)
T PRK14235 96 VELRARVGMVFQK--PNPFP-KSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQRL 172 (267)
T ss_pred HHHhhceEEEecC--CCCCC-CcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHH
Confidence 1234443 23333 599999976431 1 11 234677899999852 245788999999999999
Q ss_pred HHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 553 ~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+|||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++.. .+..++++
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~ 250 (267)
T PRK14235 173 CIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVE-VGDTEKMF 250 (267)
T ss_pred HHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999999999876 3599999999999999999999999999985 46666654
No 383
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-39 Score=323.98 Aligned_cols=201 Identities=29% Similarity=0.451 Sum_probs=173.0
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhccc
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~q~ 496 (645)
|+++|++++|+++.+|+++||+|++|++++|+|+||||||||+++|+|+++|.+|+|.++|.++. .+|.+|+
T Consensus 1 l~~~~l~~~~~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~ 80 (232)
T cd03300 1 IELENVSKFYGGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQN 80 (232)
T ss_pred CEEEeEEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEecc
Confidence 46899999999889999999999999999999999999999999999999999999999998653 2344444
Q ss_pred hhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCC
Q 006442 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (645)
Q Consensus 497 ~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 570 (645)
..+....|+.+|+...... ....++..+++.+++. +..++.+..||+|||||++|||||+.+|++||||||
T Consensus 81 --~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP 157 (232)
T cd03300 81 --YALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLE-GYANRKPSQLSGGQQQRVAIARALVNEPKVLLLDEP 157 (232)
T ss_pred --cccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3455568999998754321 1133567889999995 678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 571 t~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|++||+.++..+.++|+++ +.|||++|||++++.++|||+++|++|++... ++.+++.
T Consensus 158 ~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~-~~~~~~~ 219 (232)
T cd03300 158 LGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQI-GTPEEIY 219 (232)
T ss_pred cccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEec-CCHHHHH
Confidence 9999999999999999764 46999999999999999999999999999854 5655544
No 384
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=328.06 Aligned_cols=204 Identities=26% Similarity=0.358 Sum_probs=171.5
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CeeEEEECceecc---------
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~--------- 489 (645)
+|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 4 ~l~i~~v~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~ 83 (258)
T PRK14241 4 RIDVKDLNIYYGSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAV 83 (258)
T ss_pred cEEEeeEEEEECCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHH
Confidence 58999999999888899999999999999999999999999999999999974 6999999997652
Q ss_pred ---cchhccchhhcCCCCCCHHHHHHhhhcc---cc----HHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHHHHHH
Q 006442 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFCK 556 (645)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~lAr 556 (645)
.+|+.|+ ..+.+..|+.+|+...... .. .+.+..+++.+++. .+..++++.+|||||||||+|||
T Consensus 84 ~~~i~~~~q~--~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lar 161 (258)
T PRK14241 84 RRTIGMVFQR--PNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCIAR 161 (258)
T ss_pred hcceEEEccc--cccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHHHH
Confidence 1234443 3455678999999764321 11 23456778888873 24568899999999999999999
Q ss_pred HHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEe------CCeEEeeCCChhHH
Q 006442 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVK------GSNLQDYAGDYNQV 628 (645)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~------~g~i~~~~~~~~~~ 628 (645)
||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++|||+++|+ +|+++. .++.+++
T Consensus 162 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~-~~~~~~~ 240 (258)
T PRK14241 162 AIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE-IDDTEKI 240 (258)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe-cCCHHHH
Confidence 999999999999999999999999999999875 3599999999999999999999997 799985 4676665
Q ss_pred HH
Q 006442 629 QS 630 (645)
Q Consensus 629 ~~ 630 (645)
..
T Consensus 241 ~~ 242 (258)
T PRK14241 241 FS 242 (258)
T ss_pred Hh
Confidence 43
No 385
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=333.25 Aligned_cols=209 Identities=23% Similarity=0.360 Sum_probs=166.9
Q ss_pred cEEEEeEEEEeC-CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------ceEEEEec
Q 006442 97 GVKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------MKIAFLSQ 168 (645)
Q Consensus 97 ~i~i~nls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-------~~i~~v~Q 168 (645)
.|+++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|++|
T Consensus 6 ~l~~~~l~~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~i~~v~q 85 (272)
T PRK15056 6 GIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQKNLVAYVPQ 85 (272)
T ss_pred eEEEEeEEEEecCCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhccceEEEecc
Confidence 489999999995 5779999999999999999999999999999999999999999999998743 25999999
Q ss_pred cCccC--CCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 169 EFEVS--MSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 169 ~~~~~--~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
++.+. ...++.+++.......... . .......+.++.++++.+
T Consensus 86 ~~~~~~~~~~~~~~~i~~~~~~~~~~----------~-------------------------~~~~~~~~~~~~~~l~~~ 130 (272)
T PRK15056 86 SEEVDWSFPVLVEDVVMMGRYGHMGW----------L-------------------------RRAKKRDRQIVTAALARV 130 (272)
T ss_pred ccccccCCCcchhhheeccccccccc----------c-------------------------cCCCHHHHHHHHHHHHHc
Confidence 97642 2346777764211000000 0 000011233456677888
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhc
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~ 323 (645)
|+. +..++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|+ +.|+|||++|||++++..+|
T Consensus 131 gl~-~~~~~~~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~ 209 (272)
T PRK15056 131 DMV-EFRHRQIGELSGGQKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFC 209 (272)
T ss_pred CCh-hHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhC
Confidence 886 56788999999999999999999999999999999999999999999998874 35899999999999999999
Q ss_pred CeEEEEcCceeEEeccChHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~ 343 (645)
|+++++ +|++. ..|..++
T Consensus 210 d~v~~~-~G~i~-~~g~~~~ 227 (272)
T PRK15056 210 DYTVMV-KGTVL-ASGPTET 227 (272)
T ss_pred CEEEEE-CCEEE-eecCHHh
Confidence 999887 78873 4455443
No 386
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-39 Score=311.06 Aligned_cols=160 Identities=36% Similarity=0.580 Sum_probs=145.7
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEEec
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v~Q 168 (645)
++++|++++|++.++|+++||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++|
T Consensus 1 l~~~~l~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (173)
T cd03230 1 IEVRNLSKRYGKKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIGYLPE 80 (173)
T ss_pred CEEEEEEEEECCeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEEEEec
Confidence 468999999988889999999999999999999999999999999999999999999987642 35999999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++..|+.||+
T Consensus 81 ~~~~~~~~tv~~~~------------------------------------------------------------------ 94 (173)
T cd03230 81 EPSLYENLTVRENL------------------------------------------------------------------ 94 (173)
T ss_pred CCccccCCcHHHHh------------------------------------------------------------------
Confidence 98876767877663
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCe
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTK 325 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d~ 325 (645)
. |||||+||++|||||+.+|++|||||||++||+.+++++.++|++ .|.|+|++|||.+++..+||+
T Consensus 95 --~--------LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~ 164 (173)
T cd03230 95 --K--------LSGGMKQRLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDR 164 (173)
T ss_pred --h--------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCE
Confidence 0 899999999999999999999999999999999999999988743 478999999999999999999
Q ss_pred EEEEcCce
Q 006442 326 IVETEMGV 333 (645)
Q Consensus 326 i~~l~~G~ 333 (645)
++++++|+
T Consensus 165 i~~l~~g~ 172 (173)
T cd03230 165 VAILNNGR 172 (173)
T ss_pred EEEEeCCC
Confidence 99999885
No 387
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=6.5e-39 Score=327.83 Aligned_cols=200 Identities=28% Similarity=0.446 Sum_probs=168.9
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecccchhccchhhcCC
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALD 502 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~q~~~~~l~ 502 (645)
++|+++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.+++. ...+|++|+.. +.
T Consensus 3 ~~l~~~~l~~~~~~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~~-~~i~~v~q~~~--~~ 79 (251)
T PRK09544 3 SLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNGK-LRIGYVPQKLY--LD 79 (251)
T ss_pred cEEEEeceEEEECCceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCc-cCEEEeccccc--cc
Confidence 3799999999999888999999999999999999999999999999999999999999999874 24567776532 22
Q ss_pred C--CCCHHHHHHhhhccccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHH
Q 006442 503 L--DKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKE 580 (645)
Q Consensus 503 ~--~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~ 580 (645)
. ..++.+++.... .....++..+++.+++. +..++++..|||||||||+|||||+.+|++|||||||++||+.++.
T Consensus 80 ~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~ 157 (251)
T PRK09544 80 TTLPLTVNRFLRLRP-GTKKEDILPALKRVQAG-HLIDAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQV 157 (251)
T ss_pred cccChhHHHHHhccc-cccHHHHHHHHHHcCCh-HHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHH
Confidence 2 246777764321 22345678899999994 6778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 581 MLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 581 ~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
.+.+.|.++ +.|||+||||++++.++||++++|++ +++. .|+.+++.
T Consensus 158 ~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~-~g~~~~~~ 208 (251)
T PRK09544 158 ALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICC-SGTPEVVS 208 (251)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEe-eCCHHHHh
Confidence 999998754 56999999999999999999999965 6654 46665553
No 388
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-38 Score=331.16 Aligned_cols=206 Identities=27% Similarity=0.413 Sum_probs=172.9
Q ss_pred CCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCeeEEEECceecc-----
Q 006442 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL----- 489 (645)
Q Consensus 420 ~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~----- 489 (645)
.++++|+++|++++|+++.+|+++||+|.+||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 35 ~~~~~l~i~~l~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 35 SGETVIEARDLNVFYGDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred CCCceEEEEEEEEEECCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 46778999999999988889999999999999999999999999999999999997 68999999997652
Q ss_pred -------cchhccchhhcCCCCCCHHHHHHhhhcc-----ccHHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHHHH
Q 006442 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED-----WRIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (645)
Q Consensus 490 -------~~~~~q~~~~~l~~~~tv~e~v~~~~~~-----~~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~l 554 (645)
.+|++|+. .++. .|+.+|+...... ....++..+++.+++. .+..++++.+|||||||||+|
T Consensus 115 ~~~~~~~i~~v~q~~--~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qrv~L 191 (285)
T PRK14254 115 PVALRRRIGMVFQKP--NPFP-KSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQRLCI 191 (285)
T ss_pred hHhhhccEEEEecCC--ccCc-CCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHHHHH
Confidence 13445442 3434 4999999764321 1134577888898874 245688999999999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEE-EEeCCeEEeeCCChhHHH
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVV-EVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~-~l~~g~i~~~~~~~~~~~ 629 (645)
||||+.+|+||||||||++||+.+++.+.++|+++ +.|||+||||++++..+|||++ +|++|+++.. ++.+++.
T Consensus 192 AraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~-g~~~~~~ 268 (285)
T PRK14254 192 ARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEF-DDTDKIF 268 (285)
T ss_pred HHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEe-CCHHHHH
Confidence 99999999999999999999999999999999876 3599999999999999999975 5799999864 6655543
No 389
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.6e-39 Score=328.35 Aligned_cols=207 Identities=25% Similarity=0.427 Sum_probs=161.9
Q ss_pred EEEEeEEEEeCC--eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEE
Q 006442 98 VKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (645)
Q Consensus 98 i~i~nls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~ 165 (645)
|+++|++++|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 478999999964 569999999999999999999999999999999999999999999998743 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.++ ..||.||+...... .. ...+....+ . ..+.+++..
T Consensus 81 ~~q~~~~~-~~tv~~nl~~~~~~-~~----~~~~~~~~~------------------------~-------~~~~~~l~~ 123 (237)
T cd03252 81 VLQENVLF-NRSIRDNIALADPG-MS----MERVIEAAK------------------------L-------AGAHDFISE 123 (237)
T ss_pred EcCCchhc-cchHHHHhhccCCC-CC----HHHHHHHHH------------------------H-------cCcHHHHHh
Confidence 99998774 57999998532110 00 000000000 0 011122333
Q ss_pred c--CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHh
Q 006442 246 L--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 246 l--gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~ 321 (645)
+ ++. ...++++.+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|++ .|+|||++|||++++.
T Consensus 124 l~~~~~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~- 201 (237)
T cd03252 124 LPEGYD-TIVGEQGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVK- 201 (237)
T ss_pred Cccccc-chhhcCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHH-
Confidence 3 343 345677899999999999999999999999999999999999999999888753 4889999999999996
Q ss_pred hcCeEEEEcCceeEEeccChHHH
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
.||+++++++|++. +.|+..++
T Consensus 202 ~~d~v~~l~~G~i~-~~~~~~~~ 223 (237)
T cd03252 202 NADRIIVMEKGRIV-EQGSHDEL 223 (237)
T ss_pred hCCEEEEEECCEEE-EEcCHHHH
Confidence 59999999999984 55665443
No 390
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-39 Score=326.07 Aligned_cols=206 Identities=27% Similarity=0.435 Sum_probs=162.5
Q ss_pred EEEEeEEEEeCCe--eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEE
Q 006442 98 VKLENISKSYKGV--TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (645)
Q Consensus 98 i~i~nls~~y~~~--~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~ 165 (645)
|+++|++++|++. ++++++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999765 79999999999999999999999999999999999999999999998642 24999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.++. .|++||+....... .. ..+....+ ...+.+++..
T Consensus 81 ~~q~~~~~~-~tv~enl~~~~~~~-~~----~~~~~~~~-------------------------------~~~~~~~~~~ 123 (234)
T cd03251 81 VSQDVFLFN-DTVAENIAYGRPGA-TR----EEVEEAAR-------------------------------AANAHEFIME 123 (234)
T ss_pred eCCCCeecc-ccHHHHhhccCCCC-CH----HHHHHHHH-------------------------------HcCcHHHHHh
Confidence 999988754 69999985321100 00 00000000 0011223333
Q ss_pred c--CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHh
Q 006442 246 L--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQ 321 (645)
Q Consensus 246 l--gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~ 321 (645)
+ |+. ...++++.+||||||||++|||||+.+|++|||||||++||+.+++.+.+.|++ .+.|||++||+++++..
T Consensus 124 l~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~ 202 (234)
T cd03251 124 LPEGYD-TVIGERGVKLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIEN 202 (234)
T ss_pred cccCcc-eeeccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh
Confidence 3 443 345677899999999999999999999999999999999999999999988753 48899999999999976
Q ss_pred hcCeEEEEcCceeEEeccChHH
Q 006442 322 LCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 322 ~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
||+++++++|++. ..|+..+
T Consensus 203 -~d~v~~l~~G~i~-~~~~~~~ 222 (234)
T cd03251 203 -ADRIVVLEDGKIV-ERGTHEE 222 (234)
T ss_pred -CCEEEEecCCeEe-eeCCHHH
Confidence 9999999999874 4565444
No 391
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.4e-39 Score=367.83 Aligned_cols=214 Identities=27% Similarity=0.439 Sum_probs=168.0
Q ss_pred CccEEEEeEEEEeCCe--eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ce
Q 006442 95 SSGVKLENISKSYKGV--TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MK 162 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~--~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~ 162 (645)
...|+++|++|+|+.. ++|+|+||+|++||++||||+||||||||+|+|+|+++|++|+|.++|.+ ..
T Consensus 469 ~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ 548 (709)
T COG2274 469 QGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQ 548 (709)
T ss_pred CceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhh
Confidence 3459999999999765 59999999999999999999999999999999999999999999999864 36
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
||||+|++.+ ++.||+|||.....+. . .+.+.+++..+. +.+.+.++
T Consensus 549 ig~V~Q~~~L-f~gSI~eNi~l~~p~~-~----~e~i~~A~~~ag---------------------------~~~fI~~l 595 (709)
T COG2274 549 VGYVLQDPFL-FSGSIRENIALGNPEA-T----DEEIIEAAQLAG---------------------------AHEFIENL 595 (709)
T ss_pred eeEEcccchh-hcCcHHHHHhcCCCCC-C----HHHHHHHHHHhC---------------------------cHHHHHhc
Confidence 9999999876 7889999996432210 0 011111111110 01111111
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLD 320 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~ 320 (645)
-.|..+..++. ...||||||||++|||||+++|+|||||||||+||+++.+.+.+.|.+ .|+|+|+|||++..+.
T Consensus 596 --P~gy~t~v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~ 672 (709)
T COG2274 596 --PMGYDTPVGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIR 672 (709)
T ss_pred --ccccccccccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhh
Confidence 12444333333 689999999999999999999999999999999999999999998865 4699999999999997
Q ss_pred hhcCeEEEEcCceeEEeccChHHHHH
Q 006442 321 QLCTKIVETEMGVSRTYEGNYSQYVL 346 (645)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~g~~~~~~~ 346 (645)
. ||+|++|++|++ ...|+.++...
T Consensus 673 ~-adrIiVl~~Gki-v~~gs~~ell~ 696 (709)
T COG2274 673 S-ADRIIVLDQGKI-VEQGSHEELLA 696 (709)
T ss_pred h-ccEEEEccCCce-eccCCHHHHHH
Confidence 5 999999999998 45677555443
No 392
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=327.44 Aligned_cols=206 Identities=27% Similarity=0.376 Sum_probs=172.2
Q ss_pred CCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC--C---CeeEEEECceecc------
Q 006442 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK--P---RGGEVLLGEHNVL------ 489 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~--p---~~G~i~~~g~~~~------ 489 (645)
..++|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++.
T Consensus 9 ~~~~l~i~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 9 KQEVYQINGMNLWYGQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred CCceEEEeeEEEEECCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 3457999999999998889999999999999999999999999999999999987 3 5899999998752
Q ss_pred ------cchhccchhhcCCCCCCHHHHHHhhhcc---cc----HHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHH
Q 006442 490 ------PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLA 553 (645)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~ 553 (645)
.+|++|+ ..+.. .|+.+|+...... .. ..++..+++.+++.. +..++++.+||||||||++
T Consensus 89 ~~~~~~i~~v~q~--~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qrv~ 165 (259)
T PRK14274 89 VELRKNIGMVFQK--GNPFP-QSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQQQRLC 165 (259)
T ss_pred HHHhhceEEEecC--Ccccc-cCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHH
Confidence 1244443 23433 5999999754321 11 123566788888742 3467899999999999999
Q ss_pred HHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 554 FCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 554 lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++.++|||+++|++|++.. .|+.++++.
T Consensus 166 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 243 (259)
T PRK14274 166 IARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVE-CNDTNKMFS 243 (259)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEE-ECCHHHHhh
Confidence 999999999999999999999999999999999876 3699999999999999999999999999985 477776653
No 393
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=325.86 Aligned_cols=202 Identities=26% Similarity=0.366 Sum_probs=170.8
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC---CCeeEEEECceecc----------c
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK---PRGGEVLLGEHNVL----------P 490 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~---p~~G~i~~~g~~~~----------~ 490 (645)
+++++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++. .
T Consensus 2 ~~~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i 81 (246)
T PRK14269 2 IAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNV 81 (246)
T ss_pred ceeeeeeEEEECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhE
Confidence 4889999999998889999999999999999999999999999999999984 68999999998763 2
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhc--c------ccHHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHHHHHHc
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAE--D------WRIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCKFMV 559 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~--~------~~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~lAral~ 559 (645)
+|++|. ..++ ..|+.+|+..... . ....++..+++.+++.. +..++.+.+|||||||||+|||||+
T Consensus 82 ~~~~q~--~~l~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~ 158 (246)
T PRK14269 82 GMVFQQ--PNVF-VKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALA 158 (246)
T ss_pred EEEecC--Cccc-cccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHHHHHh
Confidence 345554 2343 4699999975421 1 11234678899999852 3467889999999999999999999
Q ss_pred cCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++.++||++++|++|+++.. |..+++.
T Consensus 159 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~-g~~~~~~ 229 (246)
T PRK14269 159 IKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEF-GESKEFF 229 (246)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEE-CCHHHHH
Confidence 999999999999999999999999999865 56999999999999999999999999999864 5555544
No 394
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=9.4e-39 Score=319.06 Aligned_cols=192 Identities=27% Similarity=0.445 Sum_probs=165.9
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhccc
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~q~ 496 (645)
++++|++++|+. .+.++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 ~~~~~l~~~~~~--~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q~ 78 (213)
T TIGR01277 1 LALDKVRYEYEH--LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQE 78 (213)
T ss_pred CeEEeeeEEeCC--cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEecc
Confidence 468999999974 578999999999999999999999999999999999999999999998752 2345554
Q ss_pred hhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCC
Q 006442 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (645)
Q Consensus 497 ~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 570 (645)
..+++..|+.+|+...... ....++.++++.+++. +..++.+.+||||||||++|||||+.+|++||||||
T Consensus 79 --~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP 155 (213)
T TIGR01277 79 --NNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIA-DYLDRLPEQLSGGQRQRVALARCLVRPNPILLLDEP 155 (213)
T ss_pred --CccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcH-HHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3466678999999754211 1234577899999994 677999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEee
Q 006442 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDY 621 (645)
Q Consensus 571 t~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~ 621 (645)
|++||+.++..+.++|.++ +.|||+||||++++.++||++++|++|++...
T Consensus 156 t~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~ 210 (213)
T TIGR01277 156 FSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVV 210 (213)
T ss_pred CccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEe
Confidence 9999999999999998764 45999999999999999999999999999753
No 395
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=329.25 Aligned_cols=208 Identities=19% Similarity=0.262 Sum_probs=164.2
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC---------
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN--------- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~--------- 160 (645)
.++|+++|++++|+++++|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 18 ~~~l~~~nl~~~~~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~ 97 (274)
T PRK14265 18 HSVFEVEGVKVFYGGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSV 97 (274)
T ss_pred CceEEEeeEEEEeCCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhH
Confidence 4479999999999988899999999999999999999999999999999999863 68999987632
Q ss_pred ---ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 161 ---MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 161 ---~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
..|+|++|++.++. .|+.+|+....... . .. ...++
T Consensus 98 ~~~~~i~~v~q~~~l~~-~tv~~nl~~~~~~~-~-----------~~----------------------------~~~~~ 136 (274)
T PRK14265 98 KLRRQVGMVFQRPNPFP-KSIYENIAFAPRAN-G-----------YK----------------------------GNLDE 136 (274)
T ss_pred HHhhcEEEEccCCcccc-ccHHHHHHhHHHhc-C-----------ch----------------------------HHHHH
Confidence 25999999987765 59999985321000 0 00 00011
Q ss_pred HHHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEE
Q 006442 238 KVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVII 312 (645)
Q Consensus 238 ~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIiv 312 (645)
.+.++++.+++. .+..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|++ .+.|||++
T Consensus 137 ~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~ 216 (274)
T PRK14265 137 LVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMV 216 (274)
T ss_pred HHHHHHHHcccchhhHHHhcCCcccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 122233333331 1345677899999999999999999999999999999999999999999988753 36899999
Q ss_pred ecCHHHHHhhcCeEEEEc---------CceeEEeccChHHH
Q 006442 313 SHDRAFLDQLCTKIVETE---------MGVSRTYEGNYSQY 344 (645)
Q Consensus 313 sHd~~~l~~~~d~i~~l~---------~G~~~~~~g~~~~~ 344 (645)
|||++++..+||++++|+ +|++. ..|...+.
T Consensus 217 sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~-~~g~~~~~ 256 (274)
T PRK14265 217 THNMQQASRVADWTAFFNTEIDEYGKRRGKLV-EFSPTEQM 256 (274)
T ss_pred eCCHHHHHHhCCEEEEEecccccccccCceEE-EeCCHHHH
Confidence 999999999999999997 68773 45655443
No 396
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-39 Score=320.28 Aligned_cols=189 Identities=31% Similarity=0.419 Sum_probs=162.9
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------------c
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------P 490 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------------~ 490 (645)
+.+ ||+++|+++.+ |+||+|++ |+++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 2 ~~~-~l~~~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 77 (214)
T cd03297 2 LCV-DIEKRLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKI 77 (214)
T ss_pred cee-eeeEecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcE
Confidence 345 89999998766 99999999 999999999999999999999999999999999997642 1
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhcc----ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEE
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAED----WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~~----~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 566 (645)
+|++|+ ..+++..|+.+|+...... ....++.++++.+++. +..++++.+||||||||++|||||+.+|++||
T Consensus 78 ~~~~q~--~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~lll 154 (214)
T cd03297 78 GLVFQQ--YALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLD-HLLNRYPAQLSGGEKQRVALARALAAQPELLL 154 (214)
T ss_pred EEEecC--CccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCH-hHhhcCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 244443 3455678999998764321 1234577899999995 66789999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 567 LDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 567 LDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
|||||++||+.+++.+.+.|.++ +.|||++|||++++..+||++++|++|++..
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 212 (214)
T cd03297 155 LDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQY 212 (214)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEe
Confidence 99999999999999999998754 4699999999999999999999999999874
No 397
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=329.06 Aligned_cols=206 Identities=23% Similarity=0.331 Sum_probs=170.7
Q ss_pred CCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCeeEEEECceecc------
Q 006442 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL------ 489 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~------ 489 (645)
+..+|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 10 ~~~~l~i~nl~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~ 89 (269)
T PRK14259 10 KNIIISLQNVTISYGTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDP 89 (269)
T ss_pred CCceEEEEeEEEEECCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCH
Confidence 4567999999999998889999999999999999999999999999999999987 68999999997652
Q ss_pred ------cchhccchhhcCCCCCCHHHHHHhhhccc-----cHHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHHHHH
Q 006442 490 ------PNYFEQNQAEALDLDKTVLETVAEAAEDW-----RIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFC 555 (645)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~v~~~~~~~-----~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~lA 555 (645)
.+|++|+. .+.. .|+.+|+....... ..+.+..+++.+++. .+..++++.+|||||||||+||
T Consensus 90 ~~~~~~i~~v~q~~--~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~la 166 (269)
T PRK14259 90 VEVRRRIGMVFQQP--NPFP-KSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQRLCIA 166 (269)
T ss_pred HHHhhceEEEccCC--ccch-hhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHHHH
Confidence 23445442 3433 59999997643211 123456678887763 2456888999999999999999
Q ss_pred HHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeC-----------CeEEeeC
Q 006442 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKG-----------SNLQDYA 622 (645)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~-----------g~i~~~~ 622 (645)
|||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++.++|||+++|++ |++++ .
T Consensus 167 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~~~-~ 245 (269)
T PRK14259 167 RTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYLVE-F 245 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceEEE-e
Confidence 9999999999999999999999999999999876 35999999999999999999999996 55665 4
Q ss_pred CChhHHHH
Q 006442 623 GDYNQVQS 630 (645)
Q Consensus 623 ~~~~~~~~ 630 (645)
|+.+++++
T Consensus 246 ~~~~~~~~ 253 (269)
T PRK14259 246 NETKKIFN 253 (269)
T ss_pred CCHHHHHh
Confidence 66666543
No 398
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-39 Score=332.95 Aligned_cols=204 Identities=25% Similarity=0.389 Sum_probs=172.4
Q ss_pred cEEEEEeeeeeeCC------eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-------
Q 006442 423 SVVTIKNLEFGYED------RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~------~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~------- 489 (645)
++|+++|++++|++ +++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 47999999999963 46999999999999999999999999999999999999999999999998752
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHc
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV 559 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~ 559 (645)
.+|++|+....+ +..++.+|+.+.... . ....+..+++.+|+. +..++++.+|||||||||+|||||+
T Consensus 83 ~~~~i~~v~q~~~~~~-~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LS~G~~qrv~laral~ 160 (280)
T PRK13633 83 IRNKAGMVFQNPDNQI-VATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMY-EYRRHAPHLLSGGQKQRVAIAGILA 160 (280)
T ss_pred HhhheEEEecChhhhh-ccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCH-hHhhCCcccCCHHHHHHHHHHHHHH
Confidence 134455432223 346899998765321 1 124577889999994 6789999999999999999999999
Q ss_pred cCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.. |||+++|++|++.. .|+.+++..
T Consensus 161 ~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~-~d~v~~l~~G~i~~-~g~~~~~~~ 233 (280)
T PRK13633 161 MRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVE-ADRIIVMDSGKVVM-EGTPKEIFK 233 (280)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhc-CCEEEEEECCEEEE-ecCHHHHhc
Confidence 999999999999999999999999999864 4599999999999986 99999999999985 467666543
No 399
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=325.47 Aligned_cols=204 Identities=24% Similarity=0.365 Sum_probs=171.5
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC--C---CeeEEEECceecc--------
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK--P---RGGEVLLGEHNVL-------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~--p---~~G~i~~~g~~~~-------- 489 (645)
..|+++|++++|+++.+|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++.
T Consensus 3 ~~l~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 82 (252)
T PRK14256 3 NKVKLEQLNVHFGKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVS 82 (252)
T ss_pred cEEEEEEEEEEeCCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHH
Confidence 45899999999988889999999999999999999999999999999999986 4 6899999998752
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhcc---cc----HHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHHH
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~lA 555 (645)
.+|++|+ ..+.+..|+.+|+...... .. ...+.++++.+++.. +..++.+.+||||||||++||
T Consensus 83 ~~~~i~~~~q~--~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~la 160 (252)
T PRK14256 83 IRRRVGMVFQK--PNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQQRLCIA 160 (252)
T ss_pred hhccEEEEecC--CCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHHHH
Confidence 1234443 3455668999999754211 11 234677888888742 345788999999999999999
Q ss_pred HHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++|||+++|++|++... +..+++.
T Consensus 161 ral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~-~~~~~~~ 235 (252)
T PRK14256 161 RTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVEC-GETKKIF 235 (252)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEe-CCHHHHH
Confidence 9999999999999999999999999999999876 45999999999999999999999999999864 6666554
No 400
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.1e-38 Score=327.13 Aligned_cols=204 Identities=21% Similarity=0.308 Sum_probs=171.3
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC----CeeEEEECceecc--------cc
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP----RGGEVLLGEHNVL--------PN 491 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p----~~G~i~~~g~~~~--------~~ 491 (645)
+|+++|++++| ++++|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++. .+
T Consensus 4 ~l~~~~l~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~ 82 (254)
T PRK10418 4 QIELRNIALQA-AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIA 82 (254)
T ss_pred EEEEeCeEEEe-ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEE
Confidence 58999999999 67899999999999999999999999999999999999999 9999999997752 23
Q ss_pred hhccchhhcCCCCCCHHHHHHhhh----ccccHHHHHHHHhhcCCChh--hhccCcCcCCHhHHHHHHHHHHHccCCCeE
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAA----EDWRIDDIKGLLGRCNFKAD--MLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~----~~~~~~~~~~~L~~~~l~~~--~~~~~~~~LSgGqkqrv~lAral~~~p~lL 565 (645)
|++|.....+.+..++.+++.... .....+.+.++++.+++... ..++.+.+|||||||||+|||||+.+|++|
T Consensus 83 ~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lL 162 (254)
T PRK10418 83 TIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENAARVLKLYPFEMSGGMLQRMMIALALLCEAPFI 162 (254)
T ss_pred EEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCChhhhhhcCCcccCHHHHHHHHHHHHHhcCCCEE
Confidence 555543222344568888765421 11223567889999999531 468899999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 566 VLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 566 lLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||||++||+.++..+.+.|+++ +.|||+||||++.+.++|||+++|++|++.. .++.+++.
T Consensus 163 lLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~ 229 (254)
T PRK10418 163 IADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVE-QGDVETLF 229 (254)
T ss_pred EEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEE-ecCHHHHh
Confidence 999999999999999999988754 4699999999999999999999999999985 46666654
No 401
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-38 Score=325.83 Aligned_cols=203 Identities=25% Similarity=0.337 Sum_probs=169.6
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC--C---CeeEEEECceecc--------
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK--P---RGGEVLLGEHNVL-------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~--p---~~G~i~~~g~~~~-------- 489 (645)
++|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+.+ | ++|+|.++|.++.
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 83 (252)
T PRK14239 4 PILQVSDLSVYYNKKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVD 83 (252)
T ss_pred ceEEEEeeEEEECCeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHh
Confidence 47999999999998889999999999999999999999999999999999853 6 4899999998652
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhcc---c----cHHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHHH
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~----~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~lA 555 (645)
.+|++|+. .+. ..|+.+|+...... . ....+..+++.+++.. +..++.+.+|||||||||+||
T Consensus 84 ~~~~i~~v~q~~--~~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 160 (252)
T PRK14239 84 LRKEIGMVFQQP--NPF-PMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVCIA 160 (252)
T ss_pred hhhcEEEEecCC--ccC-cCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHHHH
Confidence 23444442 343 47999999754211 1 1234566788888632 346889999999999999999
Q ss_pred HHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++|||+++|++|++.. .|..+++.
T Consensus 161 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 235 (252)
T PRK14239 161 RVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIE-YNDTKQMF 235 (252)
T ss_pred HHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999999875 3699999999999999999999999999985 46666554
No 402
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.9e-39 Score=323.22 Aligned_cols=194 Identities=27% Similarity=0.442 Sum_probs=165.1
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cc
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PN 491 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~ 491 (645)
+++|+++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 5 ~~~i~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 5 SPLLQLQNVGYLAGDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred CceEEEeccEEeeCCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 45799999999998888999999999999999999999999999999999999999999999997652 23
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhc----cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEe
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAE----DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVL 567 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~----~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 567 (645)
|++|. ..+. ..|+.+|+..... ......+.++++.+++.....++++.+|||||||||+|||||+.+|++|||
T Consensus 85 ~~~q~--~~l~-~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~llll 161 (225)
T PRK10247 85 YCAQT--PTLF-GDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMPKVLLL 161 (225)
T ss_pred EEecc--cccc-cccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 44444 2343 4699999875321 112345678999999954567899999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEe--CCeEE
Q 006442 568 DEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVK--GSNLQ 619 (645)
Q Consensus 568 DEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~--~g~i~ 619 (645)
||||++||+.+++.+.++|.++ +.|||+||||++++. .||++++|+ .|++.
T Consensus 162 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~-~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 162 DEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN-HADKVITLQPHAGEMQ 218 (225)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-hCCEEEEEecccchHh
Confidence 9999999999999999988864 469999999999996 699999996 45554
No 403
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=337.28 Aligned_cols=210 Identities=21% Similarity=0.315 Sum_probs=164.5
Q ss_pred CccEEEEeEEEEeC--CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC-------
Q 006442 95 SSGVKLENISKSYK--GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN------- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~--~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~------- 160 (645)
...|+++|++++|. ..++|+|+||+|++|+++||+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 78 ~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~ 157 (329)
T PRK14257 78 ANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKIS 157 (329)
T ss_pred CceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 34699999999995 3469999999999999999999999999999999999986 579999987653
Q ss_pred -----ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcH
Q 006442 161 -----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTL 235 (645)
Q Consensus 161 -----~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (645)
..++|+||+|+++ +.|+++|+.... ... .. .+.+ ..
T Consensus 158 ~~~lr~~i~~v~q~~~~~-~~ti~eNi~~~~--~~~-------------~~-~~~~----------------------~~ 198 (329)
T PRK14257 158 SLELRTRIGMVFQKPTPF-EMSIFDNVAYGP--RNN-------------GI-NDRK----------------------IL 198 (329)
T ss_pred hHhhhccEEEEecCCccC-CCcHHHHHHhHH--Hhc-------------CC-ChHH----------------------HH
Confidence 2599999999875 689999986321 000 00 0000 00
Q ss_pred HHHHHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEE
Q 006442 236 DAKVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMV 310 (645)
Q Consensus 236 ~~~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvI 310 (645)
++.+.+.++.+++. ....++.+.+|||||||||+|||||+.+|+||||||||++||+.+..++.+.|++ .++|||
T Consensus 199 ~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii 278 (329)
T PRK14257 199 EKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSII 278 (329)
T ss_pred HHHHHHHHHHcCCcchhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEE
Confidence 11122233333331 1234567899999999999999999999999999999999999999999887753 368999
Q ss_pred EEecCHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 311 ivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+|||+++++.++||+|++|++|++. ..|+..+.
T Consensus 279 ~iTH~l~~i~~~~Driivl~~G~i~-e~g~~~~l 311 (329)
T PRK14257 279 IVTHSMAQAQRISDETVFFYQGWIE-EAGETKTI 311 (329)
T ss_pred EEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999999984 44665543
No 404
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=325.69 Aligned_cols=203 Identities=25% Similarity=0.367 Sum_probs=170.2
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcC---CCC--CeeEEEECceecc--------
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGL---EKP--RGGEVLLGEHNVL-------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~---~~p--~~G~i~~~g~~~~-------- 489 (645)
++|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+ ++| ++|+|.++|.++.
T Consensus 2 ~~l~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 81 (250)
T PRK14245 2 VKIDARDVNFWYGDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDE 81 (250)
T ss_pred cEEEEEEEEEEECCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHH
Confidence 579999999999988899999999999999999999999999999999997 454 5899999998752
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhcc-------ccHHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHHH
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED-------WRIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~~-------~~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~lA 555 (645)
.+|++|+ ..+. ..|+.+|+...... .....+..+++.+++.. +..++++.+||||||||++||
T Consensus 82 ~~~~i~~v~q~--~~~~-~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 158 (250)
T PRK14245 82 LRKNVGMVFQR--PNPF-PKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLCIA 158 (250)
T ss_pred HhhheEEEecC--CccC-cccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHHH
Confidence 1344443 2343 36999999764321 11234678888898842 346788999999999999999
Q ss_pred HHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++|||+++|++|+++. .|+.+++.
T Consensus 159 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~-~~~~~~~~ 233 (250)
T PRK14245 159 RAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVE-YDDTKKIF 233 (250)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEE-ECCHHHHh
Confidence 9999999999999999999999999999999875 3599999999999999999999999999985 46766654
No 405
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-39 Score=323.40 Aligned_cols=207 Identities=27% Similarity=0.405 Sum_probs=161.5
Q ss_pred EEEEeEEEEeCC-eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEEE
Q 006442 98 VKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (645)
Q Consensus 98 i~i~nls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~v 166 (645)
|+++|++++|++ +++++|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.. ..++|+
T Consensus 3 l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 82 (229)
T cd03254 3 IEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGVV 82 (229)
T ss_pred EEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEEe
Confidence 899999999975 469999999999999999999999999999999999999999999998632 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.++. .|+.||+....... . ...+...++ . ..+.+.++.+
T Consensus 83 ~q~~~~~~-~tv~~~~~~~~~~~-~----~~~~~~~~~--------------~-----------------~~l~~~~~~~ 125 (229)
T cd03254 83 LQDTFLFS-GTIMENIRLGRPNA-T----DEEVIEAAK--------------E-----------------AGAHDFIMKL 125 (229)
T ss_pred cCCchhhh-hHHHHHHhccCCCC-C----HHHHHHHHH--------------H-----------------hChHHHHHhC
Confidence 99987755 49999985321100 0 000000000 0 0011222222
Q ss_pred --CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhh
Q 006442 247 --GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQL 322 (645)
Q Consensus 247 --gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~ 322 (645)
|+. ...++.+.+|||||||||+|||||+.+|++|||||||+|||+.+++++.+.|++ .+.|||++||+++++..
T Consensus 126 ~~~~~-~~~~~~~~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~- 203 (229)
T cd03254 126 PNGYD-TVLGENGGNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKN- 203 (229)
T ss_pred ccccc-CHhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-
Confidence 333 235667899999999999999999999999999999999999999999887743 47899999999999975
Q ss_pred cCeEEEEcCceeEEeccChHHH
Q 006442 323 CTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 323 ~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
||+++++++|++. +.|+++++
T Consensus 204 ~d~i~~l~~g~~~-~~~~~~~~ 224 (229)
T cd03254 204 ADKILVLDDGKII-EEGTHDEL 224 (229)
T ss_pred CCEEEEEeCCeEE-EeCCHHHH
Confidence 9999999999984 45665443
No 406
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=329.77 Aligned_cols=202 Identities=26% Similarity=0.371 Sum_probs=171.8
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC--------eeEEEECceecc------
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR--------GGEVLLGEHNVL------ 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~--------~G~i~~~g~~~~------ 489 (645)
+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 1 ml~~~nl~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (272)
T PRK13547 1 MLTADHLHVARRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPR 80 (272)
T ss_pred CeEEEEEEEEECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHH
Confidence 488999999999889999999999999999999999999999999999999998 999999997652
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhcc-------c---cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHH
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED-------W---RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFC 555 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~~-------~---~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lA 555 (645)
.+|++|+. ...+..|+.+|+...... . ..+.+..+++.+++. +..++++.+|||||||||+||
T Consensus 81 ~~~~~~~v~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la 157 (272)
T PRK13547 81 LARLRAVLPQAA--QPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGAT-ALVGRDVTTLSGGELARVQFA 157 (272)
T ss_pred HHhhcEEecccC--CCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHH
Confidence 13444432 334568999999764210 1 123467889999994 567899999999999999999
Q ss_pred HHHc---------cCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeC
Q 006442 556 KFMV---------KPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYA 622 (645)
Q Consensus 556 ral~---------~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~ 622 (645)
|||+ .+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|+++. .
T Consensus 158 ral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~-~ 236 (272)
T PRK13547 158 RVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVA-H 236 (272)
T ss_pred HHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEE-e
Confidence 9999 599999999999999999999999999754 4699999999999999999999999999985 4
Q ss_pred CChhHHH
Q 006442 623 GDYNQVQ 629 (645)
Q Consensus 623 ~~~~~~~ 629 (645)
++.++..
T Consensus 237 g~~~~~~ 243 (272)
T PRK13547 237 GAPADVL 243 (272)
T ss_pred cCHHHHc
Confidence 6666553
No 407
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=5.2e-39 Score=323.32 Aligned_cols=191 Identities=25% Similarity=0.328 Sum_probs=165.4
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecccchhccchhhcCCCC
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLD 504 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~q~~~~~l~~~ 504 (645)
+.+++++++|+++++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. . + ....+.+.
T Consensus 23 l~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~--~-~-~~~~~~~~ 98 (224)
T cd03220 23 LGILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSL--L-G-LGGGFNPE 98 (224)
T ss_pred hhhhhhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchh--h-c-ccccCCCC
Confidence 789999999999999999999999999999999999999999999999999999999999976421 1 1 11234567
Q ss_pred CCHHHHHHhhhccc--c----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHH
Q 006442 505 KTVLETVAEAAEDW--R----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPS 578 (645)
Q Consensus 505 ~tv~e~v~~~~~~~--~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s 578 (645)
.|+.+|+....... . .+.+..+++.+++. +..++++.+||||||||++|||||+.+|++|||||||++||+.+
T Consensus 99 ~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~gLD~~~ 177 (224)
T cd03220 99 LTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELG-DFIDLPVKTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAAF 177 (224)
T ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHH
Confidence 89999987643211 1 23466788888984 66789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 579 KEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 579 ~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
+..+.++|.++ +.|||+||||++++..+||++++|++|++..
T Consensus 178 ~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 222 (224)
T cd03220 178 QEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRF 222 (224)
T ss_pred HHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999998764 4699999999999999999999999999874
No 408
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=4.9e-39 Score=323.51 Aligned_cols=196 Identities=30% Similarity=0.390 Sum_probs=161.9
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCccCCCCC
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRT 177 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~~T 177 (645)
+.++|++++|+++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. +.+..+...+.+..|
T Consensus 23 l~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~--~~~~~~~~~~~~~~t 100 (224)
T cd03220 23 LGILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRV--SSLLGLGGGFNPELT 100 (224)
T ss_pred hhhhhhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--chhhcccccCCCCCc
Confidence 789999999999999999999999999999999999999999999999999999999998653 222233345556789
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcccccccC
Q 006442 178 VREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLV 257 (645)
Q Consensus 178 v~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~ 257 (645)
|.||+...... . .......++++.++++.+|+. +..++++
T Consensus 101 v~enl~~~~~~---------------~------------------------~~~~~~~~~~~~~~l~~~~l~-~~~~~~~ 140 (224)
T cd03220 101 GRENIYLNGRL---------------L------------------------GLSRKEIDEKIDEIIEFSELG-DFIDLPV 140 (224)
T ss_pred HHHHHHHHHHH---------------c------------------------CCCHHHHHHHHHHHHHHcCCh-hhhhCCh
Confidence 99998522100 0 000111223455677778885 5678889
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEEcCcee
Q 006442 258 ASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVETEMGVS 334 (645)
Q Consensus 258 ~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~i~~l~~G~~ 334 (645)
.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|+ +.+.|||++||+++++..+||+++++++|++
T Consensus 141 ~~LSgG~~qrv~laral~~~p~llllDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i 220 (224)
T cd03220 141 KTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKI 220 (224)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999888764 3478999999999999999999999999987
Q ss_pred E
Q 006442 335 R 335 (645)
Q Consensus 335 ~ 335 (645)
.
T Consensus 221 ~ 221 (224)
T cd03220 221 R 221 (224)
T ss_pred E
Confidence 3
No 409
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.9e-39 Score=317.91 Aligned_cols=187 Identities=27% Similarity=0.428 Sum_probs=163.1
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceeccc---------chhc
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP---------NYFE 494 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~---------~~~~ 494 (645)
+|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +|+.
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~~~ 80 (204)
T PRK13538 1 MLEARNLACERDERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLYLG 80 (204)
T ss_pred CeEEEEEEEEECCEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEEeC
Confidence 4789999999998889999999999999999999999999999999999999999999999987531 2333
Q ss_pred cchhhcCCCCCCHHHHHHhhhcc---ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCC
Q 006442 495 QNQAEALDLDKTVLETVAEAAED---WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (645)
Q Consensus 495 q~~~~~l~~~~tv~e~v~~~~~~---~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt 571 (645)
+ ...+.+..|+.+|+...... .....+.++++.+|+. +..++++.+||||||||++||||++++|++|||||||
T Consensus 81 ~--~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt 157 (204)
T PRK13538 81 H--QPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLA-GFEDVPVRQLSAGQQRRVALARLWLTRAPLWILDEPF 157 (204)
T ss_pred C--ccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCH-HHhhCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 3 23455678999999765422 2345678899999994 5678999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEE
Q 006442 572 NHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEV 613 (645)
Q Consensus 572 ~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l 613 (645)
++||+.+++.+.++|+++ +.|||+||||++++..+.+|++++
T Consensus 158 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 158 TAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 999999999999999865 569999999999999988888877
No 410
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-39 Score=311.61 Aligned_cols=162 Identities=39% Similarity=0.572 Sum_probs=146.0
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC------------ceEEE
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN------------MKIAF 165 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~------------~~i~~ 165 (645)
|+++|++++|+++++++++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.+ ..++|
T Consensus 1 i~~~~l~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~ 80 (178)
T cd03229 1 LELKNVSKRYGQKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRIGM 80 (178)
T ss_pred CEEEEEEEEECCeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcEEE
Confidence 478999999988889999999999999999999999999999999999999999999987632 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.+++..|+.||+.
T Consensus 81 ~~q~~~~~~~~t~~~~l~-------------------------------------------------------------- 98 (178)
T cd03229 81 VFQDFALFPHLTVLENIA-------------------------------------------------------------- 98 (178)
T ss_pred EecCCccCCCCCHHHhee--------------------------------------------------------------
Confidence 999988777778877742
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---C-CCeEEEEecCHHHHHh
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---Q-DVPMVIISHDRAFLDQ 321 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~-g~tvIivsHd~~~l~~ 321 (645)
. .||||||||++|||||+.+|++|||||||+|||+.++.++.++|++ . +.|+|++||+++++..
T Consensus 99 ------~------~lS~G~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~ 166 (178)
T cd03229 99 ------L------GLSGGQQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAAR 166 (178)
T ss_pred ------e------cCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 0 0999999999999999999999999999999999999999987743 3 7899999999999999
Q ss_pred hcCeEEEEcCce
Q 006442 322 LCTKIVETEMGV 333 (645)
Q Consensus 322 ~~d~i~~l~~G~ 333 (645)
+||+++++++|+
T Consensus 167 ~~d~i~~l~~g~ 178 (178)
T cd03229 167 LADRVVVLRDGK 178 (178)
T ss_pred hcCEEEEEeCCC
Confidence 999999998873
No 411
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=8.1e-39 Score=306.98 Aligned_cols=162 Identities=25% Similarity=0.441 Sum_probs=146.3
Q ss_pred EEEEeEEEEeCC-eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCccCCCC
Q 006442 98 VKLENISKSYKG-VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSR 176 (645)
Q Consensus 98 i~i~nls~~y~~-~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~~~~~ 176 (645)
|+++|++++|++ +++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++. ..++|++|++.+ +..
T Consensus 1 i~~~~~~~~~~~~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-~~i~~~~q~~~~-~~~ 78 (166)
T cd03223 1 IELENLSLATPDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-EDLLFLPQRPYL-PLG 78 (166)
T ss_pred CEEEEEEEEcCCCCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-ceEEEECCCCcc-ccc
Confidence 478999999964 57999999999999999999999999999999999999999999999853 579999999875 467
Q ss_pred CHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCccccccc
Q 006442 177 TVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRL 256 (645)
Q Consensus 177 Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~ 256 (645)
|+.||+.. . .
T Consensus 79 tv~~nl~~------------------------------------------------------------------~----~ 88 (166)
T cd03223 79 TLREQLIY------------------------------------------------------------------P----W 88 (166)
T ss_pred cHHHHhhc------------------------------------------------------------------c----C
Confidence 99888630 0 2
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcCeEEEEcCc
Q 006442 257 VASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCTKIVETEMG 332 (645)
Q Consensus 257 ~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d~i~~l~~G 332 (645)
+.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++.+.|+|++|||.++. .+||++++++++
T Consensus 89 ~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~tiiivsh~~~~~-~~~d~i~~l~~~ 163 (166)
T cd03223 89 DDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDEESEDRLYQLLKELGITVISVGHRPSLW-KFHDRVLDLDGE 163 (166)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCHHHHHHHHHHHHHhCCEEEEEeCChhHH-hhCCEEEEEcCC
Confidence 578999999999999999999999999999999999999999999988789999999999876 589999999876
No 412
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=326.64 Aligned_cols=209 Identities=22% Similarity=0.334 Sum_probs=165.3
Q ss_pred CccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC---------
Q 006442 95 SSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN--------- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~--------- 160 (645)
...|+++|++++|+++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 14 ~~~l~~~~l~~~~~~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~~~ 93 (265)
T PRK14252 14 QQKSEVNKLNFYYGGYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPEVD 93 (265)
T ss_pred CceEEEEEEEEEECCeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccccccC
Confidence 4469999999999988899999999999999999999999999999999999875 79999986532
Q ss_pred -----ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcH
Q 006442 161 -----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTL 235 (645)
Q Consensus 161 -----~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (645)
..++|++|++.++.. |+.||+...+... .. .. ....
T Consensus 94 ~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~-~~---------------~~----------------------~~~~ 134 (265)
T PRK14252 94 PIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIR-GV---------------KR----------------------RSIL 134 (265)
T ss_pred HHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHc-CC---------------Ch----------------------HHHH
Confidence 249999999887664 9999985322100 00 00 0001
Q ss_pred HHHHHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEE
Q 006442 236 DAKVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMV 310 (645)
Q Consensus 236 ~~~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvI 310 (645)
++++.+++..+++. .+..++.+.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .+.|||
T Consensus 135 ~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tii 214 (265)
T PRK14252 135 EERVENALRNAALWDEVKDRLGDLAFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTIL 214 (265)
T ss_pred HHHHHHHHHHcCCchhhhHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEE
Confidence 12223333334432 1345677899999999999999999999999999999999999999999888753 368999
Q ss_pred EEecCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 311 IISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 311 ivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
+|||+++++..+||+++++++|++.. .|...+
T Consensus 215 ivth~~~~~~~~~d~i~~l~~G~i~~-~g~~~~ 246 (265)
T PRK14252 215 IVTHNMQQAARVSDYTAYMYMGELIE-FGATDT 246 (265)
T ss_pred EEecCHHHHHHhCCEEEEEECCEEEE-eCCHHH
Confidence 99999999999999999999999853 455443
No 413
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.5e-39 Score=326.07 Aligned_cols=200 Identities=24% Similarity=0.440 Sum_probs=160.3
Q ss_pred CccEEEEeEEEEeCC---eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------c
Q 006442 95 SSGVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------M 161 (645)
Q Consensus 95 ~~~i~i~nls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~ 161 (645)
.++|+++|++++|++ .++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. .
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 446999999999975 369999999999999999999999999999999999999999999998753 2
Q ss_pred eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHh
Q 006442 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (645)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (645)
.++|++|++.++ ..|+.+|+...+... .. ..+... .....+.+
T Consensus 89 ~i~~~~q~~~l~-~~tv~~nl~~~~~~~-~~----~~~~~~-------------------------------~~~~~~~~ 131 (226)
T cd03248 89 KVSLVGQEPVLF-ARSLQDNIAYGLQSC-SF----ECVKEA-------------------------------AQKAHAHS 131 (226)
T ss_pred hEEEEecccHHH-hhhHHHHhccccCCC-CH----HHHHHH-------------------------------HHHcCcHH
Confidence 599999998765 469999985322100 00 000000 00011234
Q ss_pred hchhc--CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHH
Q 006442 242 LMPEL--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRA 317 (645)
Q Consensus 242 ll~~l--gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~ 317 (645)
+++.+ |+. ...++.+.+|||||||||+|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++||+++
T Consensus 132 ~l~~l~~gl~-~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~ 210 (226)
T cd03248 132 FISELASGYD-TEVGEKGSQLSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLS 210 (226)
T ss_pred HHHhcccccc-chhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHH
Confidence 45555 564 346777999999999999999999999999999999999999999999988753 3689999999999
Q ss_pred HHHhhcCeEEEEcCce
Q 006442 318 FLDQLCTKIVETEMGV 333 (645)
Q Consensus 318 ~l~~~~d~i~~l~~G~ 333 (645)
++.. ||+|+++++|+
T Consensus 211 ~~~~-~d~i~~l~~g~ 225 (226)
T cd03248 211 TVER-ADQILVLDGGR 225 (226)
T ss_pred HHHh-CCEEEEecCCc
Confidence 9965 99999999885
No 414
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=9.6e-39 Score=320.48 Aligned_cols=191 Identities=30% Similarity=0.494 Sum_probs=162.1
Q ss_pred EEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cch
Q 006442 425 VTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (645)
Q Consensus 425 i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (645)
|+++|+++.|++ +.+|+++||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|.++. .+|
T Consensus 3 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (220)
T cd03245 3 IEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIGY 82 (220)
T ss_pred EEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEEE
Confidence 789999999975 57999999999999999999999999999999999999999999999997652 234
Q ss_pred hccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhhccC-----------cCcCCHhHHHHHHHHHHHccC
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRK-----------VSLLSGGEKARLAFCKFMVKP 561 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~~~~-----------~~~LSgGqkqrv~lAral~~~ 561 (645)
++|+. .+. ..|+.+|+...........+..+++.+++. +..++. +.+||||||||++|||||+.+
T Consensus 83 ~~q~~--~~~-~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~ 158 (220)
T cd03245 83 VPQDV--TLF-YGTLRDNITLGAPLADDERILRAAELAGVT-DFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLND 158 (220)
T ss_pred eCCCC--ccc-cchHHHHhhcCCCCCCHHHHHHHHHHcCcH-HHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcC
Confidence 45543 333 369999987643333344566778888884 445554 469999999999999999999
Q ss_pred CCeEEeeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 562 STLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 562 p~lLlLDEPt~~LD~~s~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
|++|||||||++||+.++..+.+.|+++. .|||+||||++++ ++||++++|++|++..
T Consensus 159 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~-~~~d~v~~l~~g~i~~ 218 (220)
T cd03245 159 PPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLL-DLVDRIIVMDSGRIVA 218 (220)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HhCCEEEEEeCCeEee
Confidence 99999999999999999999999998763 5999999999987 6899999999999874
No 415
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=324.80 Aligned_cols=208 Identities=19% Similarity=0.323 Sum_probs=167.2
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC-----------
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN----------- 160 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~----------- 160 (645)
.|+++|+++.|+++++|+|+||+|++|++++|+|+||||||||+++|+|+.+ |++|+|.++|.+
T Consensus 3 ~l~~~~v~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~ 82 (250)
T PRK14266 3 RIEVENLNTYFDDAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVEL 82 (250)
T ss_pred EEEEEeEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHHH
Confidence 4899999999998889999999999999999999999999999999999864 489999988743
Q ss_pred -ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHH
Q 006442 161 -MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKV 239 (645)
Q Consensus 161 -~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (645)
..++|++|++.++. .|+.+|+...+... . ..+....++++
T Consensus 83 ~~~i~~~~q~~~~~~-~t~~~nl~~~~~~~--------------~------------------------~~~~~~~~~~~ 123 (250)
T PRK14266 83 RKKVGMVFQKPNPFP-KSIFDNVAYGLRIH--------------G------------------------EDDEDFIEERV 123 (250)
T ss_pred hhheEEEecCCccCc-chHHHHHHhHHhhc--------------C------------------------CCCHHHHHHHH
Confidence 24999999998765 59999985322100 0 00000112334
Q ss_pred HhhchhcCCCc---ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEec
Q 006442 240 SKLMPELGFTA---DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISH 314 (645)
Q Consensus 240 ~~ll~~lgl~~---~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsH 314 (645)
.++++.+|+.. ...++++.+||||||||++|||||+.+|++|||||||++||+.++.++.++|++ .+.|||++||
T Consensus 124 ~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh 203 (250)
T PRK14266 124 EESLKAAALWDEVKDKLDKSALGLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTH 203 (250)
T ss_pred HHHHHHcCCchhHHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 44555555421 235777899999999999999999999999999999999999999999988753 4789999999
Q ss_pred CHHHHHhhcCeEEEEcCceeEEeccChHHH
Q 006442 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~g~~~~~ 344 (645)
+++++..+||+++++++|++. ..|+.+++
T Consensus 204 ~~~~~~~~~~~i~~l~~G~i~-~~g~~~~~ 232 (250)
T PRK14266 204 NMQQATRVSKYTSFFLNGEII-ESGLTDQI 232 (250)
T ss_pred CHHHHHhhcCEEEEEECCeEE-EeCCHHHH
Confidence 999999999999999999884 55665543
No 416
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.1e-38 Score=358.43 Aligned_cols=204 Identities=23% Similarity=0.344 Sum_probs=178.4
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------c
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------P 490 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~ 490 (645)
.++|+++|++++|+++.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 9 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 9 PPLLCARSISKQYSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred CceEEEEeEEEEeCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 45799999999999888999999999999999999999999999999999999999999999997652 2
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhccc--cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEee
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAEDW--RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLD 568 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~~~--~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 568 (645)
+|++|+ ..+.+..|+.+|+....... ..+.+.++++.+++. +..++++.+|||||||||+|||||+.+|++||||
T Consensus 89 ~~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~aL~~~p~lllLD 165 (510)
T PRK15439 89 YLVPQE--PLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQ-LDLDSSAGSLEVADRQIVEILRGLMRDSRILILD 165 (510)
T ss_pred EEEecc--CccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCC-ccccCChhhCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 355554 34667789999998653221 234577899999995 5678999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 569 EPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 569 EPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||++||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|++.. .|+++++.
T Consensus 166 EPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 228 (510)
T PRK15439 166 EPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIAL-SGKTADLS 228 (510)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecChHHcC
Confidence 999999999999999998765 4699999999999999999999999999985 57777764
No 417
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=324.98 Aligned_cols=203 Identities=25% Similarity=0.375 Sum_probs=170.2
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCeeEEEECceecc--------
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL-------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~-------- 489 (645)
++|+++|++++|+++++|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~ 82 (251)
T PRK14251 3 NIISAKDVHLSYGNYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVE 82 (251)
T ss_pred ceEEEEeeEEEECCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHH
Confidence 36999999999998889999999999999999999999999999999999997 47999999998652
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhcc---c----cHHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHHHHH
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFC 555 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~----~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~lA 555 (645)
.+|+.|+ ..+. ..|+.+|+...... . ....+..+++.+++. .+..++++.+||||||||++||
T Consensus 83 ~~~~i~~~~q~--~~~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la 159 (251)
T PRK14251 83 LRKEVGMVFQQ--PTPF-PFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQRICIA 159 (251)
T ss_pred hhccEEEEecC--CccC-CCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHHHHHH
Confidence 1234443 2333 47999999754321 1 123466788888873 2345788999999999999999
Q ss_pred HHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||+.+|++|||||||++||+.+++.+.+.|+++ +.|||+||||++++.++|||+++|++|++... +..+++.
T Consensus 160 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~-~~~~~~~ 234 (251)
T PRK14251 160 RALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEA-GPTEEMF 234 (251)
T ss_pred HHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEe-CCHHHHH
Confidence 9999999999999999999999999999999876 46999999999999999999999999999864 5655543
No 418
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-38 Score=335.91 Aligned_cols=209 Identities=27% Similarity=0.406 Sum_probs=174.7
Q ss_pred CCCCCcEEEEEeeeeeeC--CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCeeEEEECceecc-
Q 006442 418 GRSGRSVVTIKNLEFGYE--DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL- 489 (645)
Q Consensus 418 ~~~~~~~i~~~~v~~~y~--~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~- 489 (645)
.|+...+|+++|++++|. .+++|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|.++.
T Consensus 74 ~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~ 153 (329)
T PRK14257 74 DFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRS 153 (329)
T ss_pred CCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 366778899999999995 3579999999999999999999999999999999999986 57999999998863
Q ss_pred -----------cchhccchhhcCCCCCCHHHHHHhhhcc--cc-H----HHHHHHHhhcCCCh---hhhccCcCcCCHhH
Q 006442 490 -----------PNYFEQNQAEALDLDKTVLETVAEAAED--WR-I----DDIKGLLGRCNFKA---DMLDRKVSLLSGGE 548 (645)
Q Consensus 490 -----------~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~~-~----~~~~~~L~~~~l~~---~~~~~~~~~LSgGq 548 (645)
.+|++|.+ .+ +..|+++|+.+.... .. . ..+..+++.+++.. ...++++.+|||||
T Consensus 154 ~~~~~~~lr~~i~~v~q~~--~~-~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGq 230 (329)
T PRK14257 154 KKISSLELRTRIGMVFQKP--TP-FEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQ 230 (329)
T ss_pred cccchHhhhccEEEEecCC--cc-CCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHH
Confidence 13444442 23 468999999864321 11 1 12566788887632 34578899999999
Q ss_pred HHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChh
Q 006442 549 KARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (645)
Q Consensus 549 kqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~ 626 (645)
||||+|||||+.+|+||||||||++||+.+...+.+.|+++ +.|||+|||+++++.++||||++|++|++++ .|..+
T Consensus 231 kqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e-~g~~~ 309 (329)
T PRK14257 231 QQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEE-AGETK 309 (329)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHH
Confidence 99999999999999999999999999999999999999865 3699999999999999999999999999986 47777
Q ss_pred HHHH
Q 006442 627 QVQS 630 (645)
Q Consensus 627 ~~~~ 630 (645)
+++.
T Consensus 310 ~l~~ 313 (329)
T PRK14257 310 TIFI 313 (329)
T ss_pred HHhc
Confidence 7653
No 419
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=4.6e-39 Score=325.07 Aligned_cols=185 Identities=29% Similarity=0.408 Sum_probs=155.6
Q ss_pred eeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCc-----eEEEEeccCccCCCCCHHHHHHHhhH
Q 006442 113 LKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM-----KIAFLSQEFEVSMSRTVREEFMSAFK 187 (645)
Q Consensus 113 L~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~-----~i~~v~Q~~~~~~~~Tv~eni~~~~~ 187 (645)
|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+. ..+|++|++.+++..|+.||+...+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~l~~~~tv~e~l~~~~~ 80 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGPDRMVVFQNYSLLPWLTVRENIALAVD 80 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhheEEecCcccCCCCCHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999986432 36899999988778899999853211
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCcccccccCCCCChHHHHH
Q 006442 188 EEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMR 267 (645)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqR 267 (645)
.. .. ..+.....+++.++++.+|+. +..++++.+||||||||
T Consensus 81 ~~-------------~~------------------------~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qr 122 (230)
T TIGR01184 81 RV-------------LP------------------------DLSKSERRAIVEEHIALVGLT-EAADKRPGQLSGGMKQR 122 (230)
T ss_pred hc-------------cc------------------------CCCHHHHHHHHHHHHHHcCCH-HHHcCChhhCCHHHHHH
Confidence 00 00 001112234466778888986 56788899999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEEEEcCceeE
Q 006442 268 MSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIVETEMGVSR 335 (645)
Q Consensus 268 vaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~ 335 (645)
++|||||+.+|++|||||||+|||+.+++++.+.|++ .|+|||++|||++++.++||+|+++++|++.
T Consensus 123 v~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~ 194 (230)
T TIGR01184 123 VAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAA 194 (230)
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEe
Confidence 9999999999999999999999999999999887743 4889999999999999999999999999874
No 420
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=329.14 Aligned_cols=204 Identities=27% Similarity=0.441 Sum_probs=172.0
Q ss_pred CcEEEEEeeeeeeC--CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------
Q 006442 422 RSVVTIKNLEFGYE--DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~--~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (645)
+++|+++|+++.|+ ++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 5 ~~~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 84 (271)
T PRK13632 5 SVMIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKK 84 (271)
T ss_pred ceEEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcc
Confidence 35799999999995 467999999999999999999999999999999999999999999999998753
Q ss_pred cchhccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCC
Q 006442 490 PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (645)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 563 (645)
.+|++|+.. ...+..|+.+|+...... .. ...+.++++.+++. +..++.+.+||||||||++|||||+.+|+
T Consensus 85 i~~v~q~~~-~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~ 162 (271)
T PRK13632 85 IGIIFQNPD-NQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGME-DYLDKEPQNLSGGQKQRVAIASVLALNPE 162 (271)
T ss_pred eEEEEeCHH-HhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCH-HHhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 134454422 234568999999764321 11 12467789999994 67899999999999999999999999999
Q ss_pred eEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 564 LLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 564 lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+|||||||++||+.+++.+.++|+++ +.|||++|||++.+. .||++++|++|++.. .|+.+++.
T Consensus 163 lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~-~g~~~~~~ 230 (271)
T PRK13632 163 IIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAI-LADKVIVFSEGKLIA-QGKPKEIL 230 (271)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHh-hCCEEEEEECCEEEE-ecCHHHHh
Confidence 99999999999999999999999865 259999999999996 799999999999975 45655543
No 421
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-38 Score=323.80 Aligned_cols=204 Identities=25% Similarity=0.362 Sum_probs=171.8
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CeeEEEECceecc-------
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------- 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~------- 489 (645)
+++|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 2 ~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 2 KIKMESKNLNLWYGEKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred ccEEEEEEeEEEECCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 4679999999999888899999999999999999999999999999999999875 7999999998752
Q ss_pred -----cchhccchhhcCCCCCCHHHHHHhhhccc---c----HHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHHHH
Q 006442 490 -----PNYFEQNQAEALDLDKTVLETVAEAAEDW---R----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (645)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~v~~~~~~~---~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~l 554 (645)
.+|++|+. .+. ..|+.+|+.+..... . ..++..+++.+++. .+..++++.+||||||||++|
T Consensus 82 ~~~~~i~~~~q~~--~~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 158 (251)
T PRK14270 82 ELRKRVGMVFQKP--NPF-PMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQQQRLCI 158 (251)
T ss_pred HHHhheEEEecCC--CcC-CCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHH
Confidence 13444442 343 489999997543211 1 23456788888873 234678899999999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||++.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++.++|||+++|++|++... ++.++..
T Consensus 159 aral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~-~~~~~~~ 234 (251)
T PRK14270 159 ARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEF-NKTEKIF 234 (251)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEe-CCHHHHh
Confidence 99999999999999999999999999999999876 46999999999999999999999999999864 6666554
No 422
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-38 Score=307.81 Aligned_cols=205 Identities=29% Similarity=0.455 Sum_probs=177.1
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------cc
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~ 491 (645)
++++++|++..|+...+|++|||++++||+++|+|+||+||||||++|+|+.++.+|+|.++|.++. ..
T Consensus 2 ~mL~v~~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi~ 81 (237)
T COG0410 2 PMLEVENLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGIA 81 (237)
T ss_pred CceeEEeEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCeE
Confidence 4799999999999999999999999999999999999999999999999999999999999999873 13
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhcccc-----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEE
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAEDWR-----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~~~-----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 566 (645)
|++|. ..+++.+||.||+..+..... ......+.+.|---.+..+++..+|||||||-++|||||+.+|++|+
T Consensus 82 ~VPeg--R~iF~~LTVeENL~~g~~~~~~~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~PklLL 159 (237)
T COG0410 82 YVPEG--RRIFPRLTVEENLLLGAYARRDKEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPKLLL 159 (237)
T ss_pred eCccc--ccchhhCcHHHHHhhhhhcccccccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCCEEE
Confidence 55654 457899999999987643211 11145566666433567789999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHhcC---c-eEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 567 LDEPTNHLDIPSKEMLEEAISEYK---G-TVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 567 LDEPt~~LD~~s~~~l~~~l~~~~---~-tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|||||.||-|.-.+.+.++|++.. + ||++|-++..++.+++||.++|++|+++ +.|+-+++.+
T Consensus 160 LDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv-~~G~~~eL~~ 226 (237)
T COG0410 160 LDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIV-LSGTAAELLA 226 (237)
T ss_pred ecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEE-EecCHHHHhc
Confidence 999999999999999999998653 3 9999999999999999999999999998 4688777654
No 423
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.4e-38 Score=358.65 Aligned_cols=207 Identities=31% Similarity=0.461 Sum_probs=172.4
Q ss_pred CccEEEEeEEEEeCC-----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEc-CC---------
Q 006442 95 SSGVKLENISKSYKG-----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKA-KS--------- 159 (645)
Q Consensus 95 ~~~i~i~nls~~y~~-----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~-~~--------- 159 (645)
.++|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++ +.
T Consensus 277 ~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~ 356 (520)
T TIGR03269 277 EPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPG 356 (520)
T ss_pred CceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccc
Confidence 457999999999952 469999999999999999999999999999999999999999999984 31
Q ss_pred -------CceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCCh
Q 006442 160 -------NMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNL 232 (645)
Q Consensus 160 -------~~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (645)
..+|+|++|++.+++..||.+|+...+. +. .+.
T Consensus 357 ~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~---------------~~-------------------------~~~ 396 (520)
T TIGR03269 357 PDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIG---------------LE-------------------------LPD 396 (520)
T ss_pred hhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHH---------------cC-------------------------CCH
Confidence 1249999999888788899999853210 00 000
Q ss_pred hcHHHHHHhhchhcCCCc----ccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----c
Q 006442 233 DTLDAKVSKLMPELGFTA----DDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----K 304 (645)
Q Consensus 233 ~~~~~~i~~ll~~lgl~~----~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~ 304 (645)
...+.++.++++.+|+.. +..++++.+|||||||||+|||||+.+|+||||||||+|||+.+++.+.++|+ +
T Consensus 397 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~ 476 (520)
T TIGR03269 397 ELARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREE 476 (520)
T ss_pred HHHHHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH
Confidence 012245567788889863 25789999999999999999999999999999999999999999999998873 3
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChH
Q 006442 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYS 342 (645)
Q Consensus 305 ~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~ 342 (645)
.|.|||+||||++++.++||+++++++|++. ..|...
T Consensus 477 ~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~-~~g~~~ 513 (520)
T TIGR03269 477 MEQTFIIVSHDMDFVLDVCDRAALMRDGKIV-KIGDPE 513 (520)
T ss_pred cCcEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHH
Confidence 5899999999999999999999999999874 445543
No 424
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-38 Score=323.45 Aligned_cols=202 Identities=27% Similarity=0.406 Sum_probs=169.2
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CeeEEEECceecc---------
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~--------- 489 (645)
.|+++|+++.|+++++++|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (250)
T PRK14240 3 KISVKDLDLFYGDFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQL 82 (250)
T ss_pred eEEEEEEEEEECCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHH
Confidence 58999999999888899999999999999999999999999999999999863 6899999997753
Q ss_pred ---cchhccchhhcCCCCCCHHHHHHhhhccc-------cHHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHHHH
Q 006442 490 ---PNYFEQNQAEALDLDKTVLETVAEAAEDW-------RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCK 556 (645)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~v~~~~~~~-------~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~lAr 556 (645)
.+|++|+ ..+.. .|+.+|+......+ ..+.+.++++.+++.. +..++++.+||||||||++|||
T Consensus 83 ~~~i~~~~q~--~~~~~-~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~lar 159 (250)
T PRK14240 83 RKRVGMVFQQ--PNPFP-MSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCIAR 159 (250)
T ss_pred hccEEEEecC--CccCc-ccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHHHH
Confidence 1344443 23434 89999997643211 1234667788887632 3467889999999999999999
Q ss_pred HHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++.+.++|||+++|++|+++.. +..+++.
T Consensus 160 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~-~~~~~~~ 233 (250)
T PRK14240 160 ALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEF-GDTVDLF 233 (250)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEe-CCHHHHH
Confidence 999999999999999999999999999999876 35999999999999999999999999999864 6656554
No 425
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=329.69 Aligned_cols=202 Identities=20% Similarity=0.348 Sum_probs=166.8
Q ss_pred EEEEEeeeeeeC-CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-------cchhcc
Q 006442 424 VVTIKNLEFGYE-DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-------PNYFEQ 495 (645)
Q Consensus 424 ~i~~~~v~~~y~-~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-------~~~~~q 495 (645)
+|+++|++++|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 6 ~l~~~~l~~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~i~~v~q 85 (272)
T PRK15056 6 GIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQKNLVAYVPQ 85 (272)
T ss_pred eEEEEeEEEEecCCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhccceEEEecc
Confidence 599999999996 578999999999999999999999999999999999999999999999997652 345555
Q ss_pred chhhcCCCCCCHHHHHHhhhc----------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeE
Q 006442 496 NQAEALDLDKTVLETVAEAAE----------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLL 565 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~~----------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 565 (645)
+.........++.+++..... ......+..+++.+++. +..++++.+||||||||++|||||+.+|++|
T Consensus 86 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qrv~laraL~~~p~ll 164 (272)
T PRK15056 86 SEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMV-EFRHRQIGELSGGQKKRVFLARAIAQQGQVI 164 (272)
T ss_pred ccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCCh-hHhcCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 432111223456777643210 01123467789999994 5678999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHH
Q 006442 566 VLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQV 628 (645)
Q Consensus 566 lLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~ 628 (645)
||||||++||+.+++.+.++|.++ +.|||+||||++++.++||+++++ +|++.. .|..+++
T Consensus 165 llDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~-~g~~~~~ 228 (272)
T PRK15056 165 LLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLA-SGPTETT 228 (272)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEe-ecCHHhc
Confidence 999999999999999999999865 459999999999999999999877 899875 4665554
No 426
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.1e-38 Score=321.48 Aligned_cols=202 Identities=28% Similarity=0.350 Sum_probs=165.5
Q ss_pred cEEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC---CCccEEEEcCCC-------ce
Q 006442 97 GVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE---PDSGNVIKAKSN-------MK 162 (645)
Q Consensus 97 ~i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~---p~~G~I~~~~~~-------~~ 162 (645)
.+.++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++ |++|+|.++|.+ ..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (226)
T cd03234 3 VLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKC 82 (226)
T ss_pred cceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhccc
Confidence 3679999999965 469999999999999999999999999999999999999 999999998743 35
Q ss_pred EEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHh-
Q 006442 163 IAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK- 241 (645)
Q Consensus 163 i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~- 241 (645)
++|++|++.+++..|+.||+....... .. .. ........++.+
T Consensus 83 i~~~~q~~~~~~~~tv~enl~~~~~~~-------------~~---~~--------------------~~~~~~~~~~~~~ 126 (226)
T cd03234 83 VAYVRQDDILLPGLTVRETLTYTAILR-------------LP---RK--------------------SSDAIRKKRVEDV 126 (226)
T ss_pred EEEeCCCCccCcCCcHHHHHHHHHHhh-------------cc---cc--------------------cchHHHHHHHHHH
Confidence 999999998878889999985321100 00 00 000001112333
Q ss_pred hchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCH-H
Q 006442 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDR-A 317 (645)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~-~ 317 (645)
+++.+++. +..++.+.+|||||+||++|||||+.+|++|||||||+|||+.++..+.++|+ +.+.|+|++||+. +
T Consensus 127 ~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~ 205 (226)
T cd03234 127 LLRDLALT-RIGGNLVKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRS 205 (226)
T ss_pred HHHhhcch-hhhcccccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCH
Confidence 67777775 56678899999999999999999999999999999999999999999988774 3588999999998 6
Q ss_pred HHHhhcCeEEEEcCceeE
Q 006442 318 FLDQLCTKIVETEMGVSR 335 (645)
Q Consensus 318 ~l~~~~d~i~~l~~G~~~ 335 (645)
.+.++||+++++++|++.
T Consensus 206 ~~~~~~d~i~~l~~G~i~ 223 (226)
T cd03234 206 DLFRLFDRILLLSSGEIV 223 (226)
T ss_pred HHHHhCCEEEEEeCCEEE
Confidence 899999999999999874
No 427
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-38 Score=328.89 Aligned_cols=206 Identities=25% Similarity=0.355 Sum_probs=171.9
Q ss_pred CCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCeeEEEECceecc-----
Q 006442 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL----- 489 (645)
Q Consensus 420 ~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~----- 489 (645)
.++++|+++|++++|+++.+|+|+||+|.+||+++|+|+||||||||+++|+|+.+ |++|+|.++|.++.
T Consensus 35 ~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 35 GGKPHVVAKNFSIYYGEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred CCceEEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 36678999999999988889999999999999999999999999999999999864 49999999997642
Q ss_pred -------cchhccchhhcCCCCCCHHHHHHhhhcc---cc----HHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHH
Q 006442 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARL 552 (645)
Q Consensus 490 -------~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv 552 (645)
.+|++|+. .+.. .|+.+|+...... .. .+.+..+++.+++. .+..++++..|||||||||
T Consensus 115 ~~~~~~~i~~v~q~~--~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv 191 (286)
T PRK14275 115 EVLLRKKIGMVFQKP--NPFP-KSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRL 191 (286)
T ss_pred hHHhhhcEEEECCCC--CCCc-cCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHHHHHH
Confidence 12444442 3433 5999999864321 11 23456778888763 2456888999999999999
Q ss_pred HHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 553 ~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+|||||+.+|++|||||||++||+.++..+.+.|+++. .|||+||||++++.++|||+++|++|++.. .|..+++.
T Consensus 192 ~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~-~g~~~~~~ 269 (286)
T PRK14275 192 CVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVE-HAPTAQLF 269 (286)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999999998763 499999999999999999999999999985 46666554
No 428
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=328.98 Aligned_cols=205 Identities=30% Similarity=0.421 Sum_probs=173.3
Q ss_pred CcEEEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCe---eEEEECceecc-------
Q 006442 422 RSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRG---GEVLLGEHNVL------- 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~---G~i~~~g~~~~------- 489 (645)
..+|+++|+++.|++ +++|+++||+|++||+++|+|+||||||||+++|+|+++|++ |+|.++|.++.
T Consensus 3 ~~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 3 DNIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred CceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 347999999999964 469999999999999999999999999999999999999987 89999998763
Q ss_pred ---cchhccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHcc
Q 006442 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (645)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~ 560 (645)
.+|++|+.. ...+..|+.+|+.+.... .. .+.+..+++.+++. +..++++.+||||||||++|||||+.
T Consensus 83 ~~~ig~v~q~~~-~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LS~G~~qrv~laral~~ 160 (282)
T PRK13640 83 REKVGIVFQNPD-NQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGML-DYIDSEPANLSGGQKQRVAIAGILAV 160 (282)
T ss_pred HhheEEEEECHH-HhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCh-hHhcCCcccCCHHHHHHHHHHHHHHc
Confidence 235555432 234578999999754321 11 23477889999995 67899999999999999999999999
Q ss_pred CCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 561 ~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++. +|||+++|++|++.. .|+.+++..
T Consensus 161 ~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~-~~d~i~~l~~G~i~~-~g~~~~~~~ 232 (282)
T PRK13640 161 EPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEAN-MADQVLVLDDGKLLA-QGSPVEIFS 232 (282)
T ss_pred CCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEE-eCCHHHHhc
Confidence 99999999999999999999999999764 469999999999995 799999999999985 466666543
No 429
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-38 Score=320.11 Aligned_cols=201 Identities=30% Similarity=0.462 Sum_probs=172.4
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhccc
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~q~ 496 (645)
|+++|++++|++. +|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|+
T Consensus 1 l~~~~l~~~~~~~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~q~ 79 (235)
T cd03299 1 LKVENLSKDWKEF-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQN 79 (235)
T ss_pred CeeEeEEEEeCCc-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEeec
Confidence 4689999999765 899999999999999999999999999999999999999999999998753 2344443
Q ss_pred hhhcCCCCCCHHHHHHhhhccc------cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCC
Q 006442 497 QAEALDLDKTVLETVAEAAEDW------RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (645)
Q Consensus 497 ~~~~l~~~~tv~e~v~~~~~~~------~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 570 (645)
..+++..|+.+|+....... ..+.+.++++.+++. ...++.+.+|||||||||+||||++.+|++||||||
T Consensus 80 --~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP 156 (235)
T cd03299 80 --YALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGID-HLLNRKPETLSGGEQQRVAIARALVVNPKILLLDEP 156 (235)
T ss_pred --CccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEECCC
Confidence 34556789999997643211 123467889999994 678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 571 t~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|++||+.++..+.+.|+++ +.|||++|||++++.++||++++|++|+++. .++++...+
T Consensus 157 t~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~ 219 (235)
T cd03299 157 FSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQ-VGKPEEVFK 219 (235)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-ecCHHHHHh
Confidence 9999999999999998764 5699999999999999999999999999985 466666544
No 430
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-38 Score=325.62 Aligned_cols=206 Identities=23% Similarity=0.298 Sum_probs=172.8
Q ss_pred CCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCeeEEEECceecc------
Q 006442 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL------ 489 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~------ 489 (645)
.+.+|+++|++++|+++++|+++||+|.+||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 17 ~~~~l~~~nl~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 17 EEIALSTKDLHVYYGKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred CCeEEEEeeEEEEECCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 3457999999999998899999999999999999999999999999999999996 58999999998752
Q ss_pred ------cchhccchhhcCCCCCCHHHHHHhhhcc---c----cHHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHH
Q 006442 490 ------PNYFEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLA 553 (645)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~----~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~ 553 (645)
.+|++|. ..+.+ .|+.+|+...... . ....+.++++.+++.. +..++++.+||||||||++
T Consensus 97 ~~~~~~i~~v~q~--~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl~ 173 (267)
T PRK14237 97 YEMRKHIGMVFQR--PNPFA-KSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSGGQQQRLC 173 (267)
T ss_pred HHHhcceEEEecC--Ccccc-ccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHHH
Confidence 1334443 23433 6999999764321 1 1234667788888742 3568899999999999999
Q ss_pred HHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 554 FCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 554 lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|||||+.+|++|||||||++||+.++..+.++|.+. +.|||+||||++++.++||++++|++|+++. .|+.+++..
T Consensus 174 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 251 (267)
T PRK14237 174 IARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIE-YDKTRNIFT 251 (267)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEE-eCCHHHHhc
Confidence 999999999999999999999999999999999875 3599999999999999999999999999986 466666543
No 431
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-38 Score=323.08 Aligned_cols=203 Identities=24% Similarity=0.394 Sum_probs=168.9
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC-----eeEEEECceecc---------
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR-----GGEVLLGEHNVL--------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~-----~G~i~~~g~~~~--------- 489 (645)
+|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|. +|+|.++|.++.
T Consensus 4 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 83 (252)
T PRK14272 4 LLSAQDVNIYYGDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAM 83 (252)
T ss_pred EEEEeeeEEEECCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHh
Confidence 689999999999889999999999999999999999999999999999999874 899999997752
Q ss_pred ---cchhccchhhcCCCCCCHHHHHHhhhcc--c-cH----HHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHHHHHH
Q 006442 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED--W-RI----DDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFCK 556 (645)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~-~~----~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~lAr 556 (645)
.+|++|+ ..+.+..|+.+|+...... . .. +.+...+..+++. .+..++++.+||||||||++|||
T Consensus 84 ~~~i~~~~q~--~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~lar 161 (252)
T PRK14272 84 RRRVGMVFQK--PNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCIAR 161 (252)
T ss_pred hceeEEEecc--CccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHHHH
Confidence 1244443 3455668999999754321 1 11 2244455666542 23457889999999999999999
Q ss_pred HHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||+.+|++|||||||++||+.++..+.+.|+++. .|||++|||++++.++|||+++|++|++.. .|..+++.
T Consensus 162 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 235 (252)
T PRK14272 162 ALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVE-HGPTDQLF 235 (252)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999998763 699999999999999999999999999985 46666654
No 432
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.2e-38 Score=316.82 Aligned_cols=189 Identities=21% Similarity=0.308 Sum_probs=160.9
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-------ceEEEEecc
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-------MKIAFLSQE 169 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-------~~i~~v~Q~ 169 (645)
+|+++|++++|++..+|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|++|.
T Consensus 2 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 81 (207)
T PRK13539 2 MLEGEDLACVRGGRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDDPDVAEACHYLGHR 81 (207)
T ss_pred EEEEEeEEEEECCeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcchhhHhhcEEecCC
Confidence 4899999999988889999999999999999999999999999999999999999999998743 248999998
Q ss_pred CccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCC
Q 006442 170 FEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFT 249 (645)
Q Consensus 170 ~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~ 249 (645)
+.+++..|+.+|+..... . .. .-++++.++++.+|+.
T Consensus 82 ~~~~~~~tv~~~l~~~~~---------------~--------------------------~~--~~~~~~~~~l~~~~l~ 118 (207)
T PRK13539 82 NAMKPALTVAENLEFWAA---------------F--------------------------LG--GEELDIAAALEAVGLA 118 (207)
T ss_pred CcCCCCCcHHHHHHHHHH---------------h--------------------------cC--CcHHHHHHHHHHcCCH
Confidence 877778899999742100 0 00 0012355677888886
Q ss_pred cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcCeE
Q 006442 250 ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCTKI 326 (645)
Q Consensus 250 ~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d~i 326 (645)
+..++++.+||||||||++|||||+.+|++|||||||+|||+.+++++.++|++ .|+|||++||+.+++.. |++
T Consensus 119 -~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~--~~~ 195 (207)
T PRK13539 119 -PLAHLPFGYLSAGQKRRVALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG--ARE 195 (207)
T ss_pred -HHHcCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc--CcE
Confidence 466888999999999999999999999999999999999999999999888753 58999999999999987 888
Q ss_pred EEEcC
Q 006442 327 VETEM 331 (645)
Q Consensus 327 ~~l~~ 331 (645)
+.++.
T Consensus 196 ~~~~~ 200 (207)
T PRK13539 196 LDLGP 200 (207)
T ss_pred EeecC
Confidence 87743
No 433
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1e-38 Score=315.65 Aligned_cols=185 Identities=21% Similarity=0.317 Sum_probs=157.4
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEEe
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLS 167 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v~ 167 (645)
+|+++|++++|++.++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|++
T Consensus 1 ml~~~~l~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~i~~~~ 80 (200)
T PRK13540 1 MLDVIELDFDYHDQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKKDLCTYQKQLCFVG 80 (200)
T ss_pred CEEEEEEEEEeCCeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCccccCHHHHHhheEEec
Confidence 3789999999998889999999999999999999999999999999999999999999998753 2599999
Q ss_pred ccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcC
Q 006442 168 QEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELG 247 (645)
Q Consensus 168 Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lg 247 (645)
|++.+++..||.+|+...... . ..+..+.++++.++
T Consensus 81 q~~~~~~~~tv~~~~~~~~~~------------------------------------------~--~~~~~~~~~l~~~~ 116 (200)
T PRK13540 81 HRSGINPYLTLRENCLYDIHF------------------------------------------S--PGAVGITELCRLFS 116 (200)
T ss_pred cccccCcCCCHHHHHHHHHhc------------------------------------------C--cchHHHHHHHHHcC
Confidence 998877789999997521100 0 00123456677777
Q ss_pred CCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHHHhhcC
Q 006442 248 FTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 248 l~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l~~~~d 324 (645)
+. +..++++.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++||+.+++.. ||
T Consensus 117 l~-~~~~~~~~~LS~G~~~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~-~d 194 (200)
T PRK13540 117 LE-HLIDYPCGLLSSGQKRQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNK-AD 194 (200)
T ss_pred Cc-hhhhCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccc-cc
Confidence 75 456788899999999999999999999999999999999999999999988753 58999999999999976 66
Q ss_pred eEE
Q 006442 325 KIV 327 (645)
Q Consensus 325 ~i~ 327 (645)
.-+
T Consensus 195 ~~~ 197 (200)
T PRK13540 195 YEE 197 (200)
T ss_pred hhh
Confidence 543
No 434
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.8e-38 Score=320.84 Aligned_cols=202 Identities=27% Similarity=0.425 Sum_probs=173.9
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------cchhccc
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------PNYFEQN 496 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------~~~~~q~ 496 (645)
|+++|++++|+++.+|+++||+|.+||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|.+|.
T Consensus 1 i~i~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q~ 80 (237)
T TIGR00968 1 IEIANISKRFGSFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQH 80 (237)
T ss_pred CEEEEEEEEECCeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEecC
Confidence 47899999999889999999999999999999999999999999999999999999999998752 1344443
Q ss_pred hhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCC
Q 006442 497 QAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (645)
Q Consensus 497 ~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 570 (645)
..+++..|+.+|+...... .....+.++++.+++. +..++.+.+||+||+||++|||||+++|+++|||||
T Consensus 81 --~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP 157 (237)
T TIGR00968 81 --YALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLE-GLGDRYPNQLSGGQRQRVALARALAVEPQVLLLDEP 157 (237)
T ss_pred --hhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3455668999999764321 1124567889999994 678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 571 t~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|++||+.+++.+.+.|.+. +.|||++||+++++.++||++++|++|++.. .++.+++.+
T Consensus 158 ~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~-~~~~~~~~~ 220 (237)
T TIGR00968 158 FGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQ-IGSPDEVYD 220 (237)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEE-ecCHHHHHc
Confidence 9999999999999999864 4699999999999999999999999999985 466666543
No 435
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=1e-38 Score=315.21 Aligned_cols=185 Identities=25% Similarity=0.364 Sum_probs=155.4
Q ss_pred EEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEEec
Q 006442 98 VKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFLSQ 168 (645)
Q Consensus 98 i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v~Q 168 (645)
|+++|++++|+++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.+ ..++|++|
T Consensus 1 l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (198)
T TIGR01189 1 LAARNLACSRGERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQRDEPHRNILYLGH 80 (198)
T ss_pred CEEEEEEEEECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccchHHhhhheEEecc
Confidence 478999999999899999999999999999999999999999999999999999999998753 35899999
Q ss_pred cCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCC
Q 006442 169 EFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGF 248 (645)
Q Consensus 169 ~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl 248 (645)
++.+++..|+.+|+..... . .. .. +.++.++++.+|+
T Consensus 81 ~~~~~~~~tv~~~l~~~~~---------------~--------------------------~~-~~-~~~~~~~l~~~~l 117 (198)
T TIGR01189 81 LPGLKPELSALENLHFWAA---------------I--------------------------HG-GA-QRTIEDALAAVGL 117 (198)
T ss_pred CcccccCCcHHHHHHHHHH---------------H--------------------------cC-Cc-HHHHHHHHHHcCC
Confidence 9887777899999752100 0 00 00 2245566777888
Q ss_pred CcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCe
Q 006442 249 TADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTK 325 (645)
Q Consensus 249 ~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~ 325 (645)
. +..++++.+||||||||++|||||+.+|++|||||||++||+.+++.+.++|+ +.|.|||++||+...+ .|++
T Consensus 118 ~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~--~~~~ 194 (198)
T TIGR01189 118 T-GFEDLPAAQLSAGQQRRLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGL--VEAR 194 (198)
T ss_pred H-HHhcCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccccc--cceE
Confidence 6 56688899999999999999999999999999999999999999999988875 3588999999998655 3566
Q ss_pred EEE
Q 006442 326 IVE 328 (645)
Q Consensus 326 i~~ 328 (645)
++.
T Consensus 195 ~~~ 197 (198)
T TIGR01189 195 ELR 197 (198)
T ss_pred Eee
Confidence 653
No 436
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.4e-38 Score=315.63 Aligned_cols=195 Identities=27% Similarity=0.380 Sum_probs=152.3
Q ss_pred EEEEeEEEEeCCe-----eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCcc
Q 006442 98 VKLENISKSYKGV-----TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEV 172 (645)
Q Consensus 98 i~i~nls~~y~~~-----~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~ 172 (645)
|+++|++++|++. ++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++| +|+|++|++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g---~i~~~~q~~~l 77 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG---SIAYVSQEPWI 77 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC---EEEEEecCchh
Confidence 4789999999764 699999999999999999999999999999999999999999999986 79999999987
Q ss_pred CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCccc
Q 006442 173 SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADD 252 (645)
Q Consensus 173 ~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~ 252 (645)
+ ..|++||+....... . +......+. ..+...+... ..|+. ..
T Consensus 78 ~-~~t~~enl~~~~~~~--~----~~~~~~~~~---------------------------~~l~~~~~~~--~~~~~-~~ 120 (204)
T cd03250 78 Q-NGTIRENILFGKPFD--E----ERYEKVIKA---------------------------CALEPDLEIL--PDGDL-TE 120 (204)
T ss_pred c-cCcHHHHhccCCCcC--H----HHHHHHHHH---------------------------cCcHHHHHhc--cCccc-ce
Confidence 5 679999986321100 0 000000000 0001111110 11222 23
Q ss_pred ccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHH-HHc---cCCCeEEEEecCHHHHHhhcCeEEE
Q 006442 253 GDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEG-YLG---KQDVPMVIISHDRAFLDQLCTKIVE 328 (645)
Q Consensus 253 ~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~-~L~---~~g~tvIivsHd~~~l~~~~d~i~~ 328 (645)
.++.+.+||||||||++|||||+.+|+++||||||++||+.+.+++.+ +++ +.+.|||++||+++.+.. ||++++
T Consensus 121 ~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~-~d~i~~ 199 (204)
T cd03250 121 IGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPH-ADQIVV 199 (204)
T ss_pred ecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhh-CCEEEE
Confidence 456689999999999999999999999999999999999999988876 443 347899999999999998 999999
Q ss_pred EcCce
Q 006442 329 TEMGV 333 (645)
Q Consensus 329 l~~G~ 333 (645)
+++|+
T Consensus 200 l~~G~ 204 (204)
T cd03250 200 LDNGR 204 (204)
T ss_pred EeCCC
Confidence 98874
No 437
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.1e-39 Score=342.35 Aligned_cols=201 Identities=26% Similarity=0.441 Sum_probs=176.4
Q ss_pred EEEEEeeeeeeCCe--eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---c-------c
Q 006442 424 VVTIKNLEFGYEDR--LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---P-------N 491 (645)
Q Consensus 424 ~i~~~~v~~~y~~~--~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---~-------~ 491 (645)
.++++||+|+|++. ++|+|+||++.+||++||+|++|||||||+.+|+|.++|++|+|.++|.++. . .
T Consensus 336 ~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~ 415 (573)
T COG4987 336 ALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETIS 415 (573)
T ss_pred eeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHh
Confidence 79999999999865 5999999999999999999999999999999999999999999999997652 1 1
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhh-----------ccCcCcCCHhHHHHHHHHHHHcc
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADML-----------DRKVSLLSGGEKARLAFCKFMVK 560 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~-----------~~~~~~LSgGqkqrv~lAral~~ 560 (645)
...|. ..+ ++.|+++|+..+.++.+++++.++|+++|+. +.. +.....||||||||++|||+|++
T Consensus 416 vl~Qr--~hl-F~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~-~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~ 491 (573)
T COG4987 416 VLTQR--VHL-FSGTLRDNLRLANPDASDEELWAALQQVGLE-KLLESAPDGLNTWLGEGGRRLSGGERRRLALARALLH 491 (573)
T ss_pred hhccc--hHH-HHHHHHHHHhhcCCCCCHHHHHHHHHHcCHH-HHHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHc
Confidence 22332 233 6789999999999888999999999999985 332 23345899999999999999999
Q ss_pred CCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 561 ~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
+.+++||||||.|||+.+.+.+.+.|.+. ++|+|+|||++..++. ||||++|++|++++ .|.+.+.+.
T Consensus 492 dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~-~drIivl~~Gkiie-~G~~~~Ll~ 561 (573)
T COG4987 492 DAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLER-MDRIIVLDNGKIIE-EGTHAELLA 561 (573)
T ss_pred CCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhh-cCEEEEEECCeeee-cCCHHhhhc
Confidence 99999999999999999999999998754 5699999999999976 99999999999996 689888876
No 438
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.4e-38 Score=339.15 Aligned_cols=196 Identities=28% Similarity=0.381 Sum_probs=168.2
Q ss_pred eeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------------cchhc
Q 006442 429 NLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------PNYFE 494 (645)
Q Consensus 429 ~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------------~~~~~ 494 (645)
|++++|+++.+ ++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++
T Consensus 4 ~l~~~~~~~~~--~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~ 81 (354)
T TIGR02142 4 RFSKRLGDFSL--DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVF 81 (354)
T ss_pred EEEEEECCEEE--EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEEEe
Confidence 88999987664 999999999999999999999999999999999999999999997652 12444
Q ss_pred cchhhcCCCCCCHHHHHHhhhccc----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCC
Q 006442 495 QNQAEALDLDKTVLETVAEAAEDW----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEP 570 (645)
Q Consensus 495 q~~~~~l~~~~tv~e~v~~~~~~~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 570 (645)
|+ ..+++.+|+.+|+.+..... ....+.++++.+++. +..++++.+|||||||||+|||||+.+|++||||||
T Consensus 82 q~--~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGqkqRvalAraL~~~p~lllLDEP 158 (354)
T TIGR02142 82 QE--ARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIG-HLLGRLPGRLSGGEKQRVAIGRALLSSPRLLLMDEP 158 (354)
T ss_pred cC--CccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCCh-hHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 43 45667789999998653221 123478899999995 678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 571 TNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 571 t~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|++||+.+++.+.+.|+++ +.|||+||||++++..+||++++|++|++.. .|..+++..
T Consensus 159 ts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 221 (354)
T TIGR02142 159 LAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAA-AGPIAEVWA 221 (354)
T ss_pred CcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEE-ECCHHHHhc
Confidence 9999999999999988764 4699999999999999999999999999985 466666543
No 439
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-38 Score=326.26 Aligned_cols=206 Identities=25% Similarity=0.388 Sum_probs=170.4
Q ss_pred CCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCeeEEEECceecc-----
Q 006442 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL----- 489 (645)
Q Consensus 420 ~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~----- 489 (645)
++.++|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 20 ~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 20 PKKVVFDTQNLNLWYGEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred CCceEEEEeeeEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 45668999999999988889999999999999999999999999999999999997 69999999997652
Q ss_pred -------cchhccchhhcCCCCCCHHHHHHhhhc--cc-c----HHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHH
Q 006442 490 -------PNYFEQNQAEALDLDKTVLETVAEAAE--DW-R----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARL 552 (645)
Q Consensus 490 -------~~~~~q~~~~~l~~~~tv~e~v~~~~~--~~-~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv 552 (645)
.+|++|+ ..++. .|+.+|+..... .. . ...+.+.++.+++. .+..++++.+||||||||+
T Consensus 100 ~~~~~~~i~~v~q~--~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv 176 (271)
T PRK14238 100 VEELRTNVGMVFQK--PNPFP-KSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRL 176 (271)
T ss_pred HHHHhhhEEEEecC--Ccccc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHH
Confidence 1344444 23433 599999975431 11 1 12345566666431 2456789999999999999
Q ss_pred HHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 553 ~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+|||||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++.++|||+++|++|++... |+.+++.
T Consensus 177 ~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~-g~~~~~~ 254 (271)
T PRK14238 177 CIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEY-DDTDKIF 254 (271)
T ss_pred HHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEe-CCHHHHH
Confidence 9999999999999999999999999999999999876 46999999999999999999999999999864 6666654
No 440
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.5e-38 Score=314.66 Aligned_cols=186 Identities=28% Similarity=0.462 Sum_probs=163.1
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------cchhcc
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFEQ 495 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~~q 495 (645)
|+++|+++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. .+|++|
T Consensus 1 l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q 80 (201)
T cd03231 1 LEADELTCERDGRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYLGH 80 (201)
T ss_pred CEEEEEEEEeCCceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEecc
Confidence 47899999999888999999999999999999999999999999999999999999999997752 123343
Q ss_pred chhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCC
Q 006442 496 NQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLD 575 (645)
Q Consensus 496 ~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD 575 (645)
+ ..+.+..|+.+|+...........+..+++.+++. +..++++.+||||||||++|||||+.+|++|||||||++||
T Consensus 81 ~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD 157 (201)
T cd03231 81 A--PGIKTTLSVLENLRFWHADHSDEQVEEALARVGLN-GFEDRPVAQLSAGQQRRVALARLLLSGRPLWILDEPTTALD 157 (201)
T ss_pred c--cccCCCcCHHHHHHhhcccccHHHHHHHHHHcCCh-hhhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCC
Confidence 3 34556789999997654333456678899999995 56788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEE
Q 006442 576 IPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEV 613 (645)
Q Consensus 576 ~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l 613 (645)
+.+++.+.+.|.++ +.|+|+||||...+..+|++++++
T Consensus 158 ~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 158 KAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999865 569999999999999999999887
No 441
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-38 Score=326.65 Aligned_cols=203 Identities=28% Similarity=0.381 Sum_probs=172.1
Q ss_pred EEEEEeeeeeeCC---eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------c
Q 006442 424 VVTIKNLEFGYED---RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (645)
Q Consensus 424 ~i~~~~v~~~y~~---~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~ 490 (645)
+|+++|++++|++ .++|+++||+|.+||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 6999999999974 35899999999999999999999999999999999999999999999998753 2
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhcc--cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCe
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAED--WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~~--~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 564 (645)
+|++|+.. ...+..|+.+|+...... .. .+.+..+++.+++ .+..++++..||||||||++|||||+.+|++
T Consensus 84 ~~v~q~~~-~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l-~~~~~~~~~~LS~G~~qrv~lAraL~~~p~l 161 (277)
T PRK13642 84 GMVFQNPD-NQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNM-LDFKTREPARLSGGQKQRVAVAGIIALRPEI 161 (277)
T ss_pred EEEEECHH-HhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCC-HhHhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 45555432 234567999999754321 11 1346788999999 4678899999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 565 LlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|||||||++||+.++..+.+.|.++ +.|||+||||++++. .||++++|++|+++. .|+.+++..
T Consensus 162 lllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~-~~d~i~~l~~G~i~~-~g~~~~~~~ 229 (277)
T PRK13642 162 IILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAA-SSDRILVMKAGEIIK-EAAPSELFA 229 (277)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-hCCEEEEEECCEEEE-eCCHHHHhc
Confidence 9999999999999999999998754 569999999999997 599999999999985 467766653
No 442
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-38 Score=322.04 Aligned_cols=200 Identities=25% Similarity=0.361 Sum_probs=166.8
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC--C---CeeEEEECceecc-------
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK--P---RGGEVLLGEHNVL------- 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~--p---~~G~i~~~g~~~~------- 489 (645)
+++|+++|++++|+++.+|+++||+|.+||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++.
T Consensus 3 ~~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 3 KKIITSSDVHLFYGKFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred cceEEEEeEEEEECCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 457999999999998889999999999999999999999999999999999975 4 5899999998652
Q ss_pred -----cchhccchhhcCCCCCCHHHHHHhhhcc---cc----HHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHHHH
Q 006442 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (645)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~~----~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~l 554 (645)
.+|+.|+ ..+.+ .|+.+|+...... .. .+.+...++.+++. .+..++.+.+|||||||||+|
T Consensus 83 ~~~~~i~~~~q~--~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv~l 159 (252)
T PRK14255 83 QLRKQVGMVFQQ--PNPFP-FSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQQQRVCI 159 (252)
T ss_pred HhcCeEEEEECC--CccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHHHHHHHH
Confidence 2244443 23434 6999999764211 11 23355667777653 245678899999999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCC
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGD 624 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~ 624 (645)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++|||+++|++|+++.+..+
T Consensus 160 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14255 160 ARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADT 231 (252)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999876 36999999999999999999999999999875333
No 443
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-38 Score=329.98 Aligned_cols=222 Identities=20% Similarity=0.315 Sum_probs=170.6
Q ss_pred CCccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCC-----CCccEEEEcCCC--------
Q 006442 94 ISSGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEE-----PDSGNVIKAKSN-------- 160 (645)
Q Consensus 94 ~~~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~-----p~~G~I~~~~~~-------- 160 (645)
...+|+++|++++|+++++|+++||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 42 ~~~~l~i~nl~~~~~~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~~ 121 (305)
T PRK14264 42 GDAKLSVEDLDVYYGDDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVNL 121 (305)
T ss_pred CCceEEEEEEEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccccH
Confidence 3457999999999998889999999999999999999999999999999999986 689999987632
Q ss_pred ----ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCC-hhcH
Q 006442 161 ----MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVN-LDTL 235 (645)
Q Consensus 161 ----~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 235 (645)
..++|++|++.++. .||+||+...+..... ... ......+ ... ....
T Consensus 122 ~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~-----------~~~-----~~~~~~~-----------~~~~~~~~ 173 (305)
T PRK14264 122 VELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGD-----------INT-----GLLARLL-----------GRDDKDAE 173 (305)
T ss_pred HHHhhceEEEccCCcccc-ccHHHHHHhHHhhccc-----------ccc-----ccccccc-----------ccCchHHH
Confidence 25999999987755 5999998643211000 000 0000000 000 0112
Q ss_pred HHHHHhhchhcCCC---cccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEE
Q 006442 236 DAKVSKLMPELGFT---ADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMV 310 (645)
Q Consensus 236 ~~~i~~ll~~lgl~---~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvI 310 (645)
++.+.+++..+++. ....++.+.+|||||||||+|||||+++|+||||||||+|||+.++..+.++|++ .+.|||
T Consensus 174 ~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tii 253 (305)
T PRK14264 174 DELVERSLRQAALWDEVNDRLDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVV 253 (305)
T ss_pred HHHHHHHHHHcCCchhhhHHhcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEE
Confidence 34455666777663 1345778899999999999999999999999999999999999999999988753 258999
Q ss_pred EEecCHHHHHhhcCeE-EEEcCceeEEeccChHHH
Q 006442 311 IISHDRAFLDQLCTKI-VETEMGVSRTYEGNYSQY 344 (645)
Q Consensus 311 ivsHd~~~l~~~~d~i-~~l~~G~~~~~~g~~~~~ 344 (645)
++||+++++..+||++ +++++|++. ..|...++
T Consensus 254 ivtH~~~~i~~~~d~i~~~l~~G~i~-~~g~~~~~ 287 (305)
T PRK14264 254 VVTHNMQQAARISDQTAVFLTGGELV-EYDDTDKI 287 (305)
T ss_pred EEEcCHHHHHHhcCEEEEEecCCEEE-EeCCHHHH
Confidence 9999999999999997 567999884 44655443
No 444
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=357.77 Aligned_cols=202 Identities=24% Similarity=0.315 Sum_probs=174.7
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------cc
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~ 491 (645)
++|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 4 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~ 83 (510)
T PRK09700 4 PYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGIG 83 (510)
T ss_pred ceEEEeeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCeE
Confidence 5799999999999888999999999999999999999999999999999999999999999997752 23
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhc------c-------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHH
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAE------D-------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFM 558 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~------~-------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral 558 (645)
|++|+ ..+.+..|+.+|+..... . ....++.++++.+|+. +..++++.+|||||||||+|||||
T Consensus 84 ~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qrv~ia~al 160 (510)
T PRK09700 84 IIYQE--LSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLK-VDLDEKVANLSISHKQMLEIAKTL 160 (510)
T ss_pred EEeec--ccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCC-CCcccchhhCCHHHHHHHHHHHHH
Confidence 44443 345667899999975321 0 0123567889999995 667999999999999999999999
Q ss_pred ccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHH
Q 006442 559 VKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQV 628 (645)
Q Consensus 559 ~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~ 628 (645)
+.+|++|||||||++||+.++..+.+.|++. +.|||+||||++++..+||++++|++|++. +.|+++++
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~-~~g~~~~~ 232 (510)
T PRK09700 161 MLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSV-CSGMVSDV 232 (510)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEe-eecchhhC
Confidence 9999999999999999999999999998764 469999999999999999999999999997 45666654
No 445
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=2.1e-38 Score=308.29 Aligned_cols=174 Identities=34% Similarity=0.559 Sum_probs=148.7
Q ss_pred EEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecccchhccchhhcCCCCC
Q 006442 426 TIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDK 505 (645)
Q Consensus 426 ~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~q~~~~~l~~~~ 505 (645)
+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++......
T Consensus 1 ~~~~l~~~~~~~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~----------- 69 (180)
T cd03214 1 EVENLSVGYGGRTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPK----------- 69 (180)
T ss_pred CeeEEEEEECCeeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHH-----------
Confidence 478999999888899999999999999999999999999999999999999999999999765310000
Q ss_pred CHHHHHHhhhccccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHH
Q 006442 506 TVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEA 585 (645)
Q Consensus 506 tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~ 585 (645)
.....+.. +..+++.+++. +..++.+.+||||||||++||||++.+|++|||||||++||+.+++.+.+.
T Consensus 70 ~~~~~i~~---------~~q~l~~~gl~-~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~ 139 (180)
T cd03214 70 ELARKIAY---------VPQALELLGLA-HLADRPFNELSGGERQRVLLARALAQEPPILLLDEPTSHLDIAHQIELLEL 139 (180)
T ss_pred HHHHHHhH---------HHHHHHHcCCH-hHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH
Confidence 00001111 11178888885 567889999999999999999999999999999999999999999999999
Q ss_pred HHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 586 ISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 586 l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
|.++ +.|+|++|||++++.++||++++|++|++..
T Consensus 140 l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 178 (180)
T cd03214 140 LRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVA 178 (180)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9865 4599999999999999999999999999864
No 446
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-38 Score=326.07 Aligned_cols=204 Identities=25% Similarity=0.409 Sum_probs=171.9
Q ss_pred CcEEEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------
Q 006442 422 RSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (645)
.++|+++|+++.|++ +.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 5 ~~~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (269)
T PRK13648 5 NSIIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKH 84 (269)
T ss_pred CceEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhh
Confidence 347999999999975 45999999999999999999999999999999999999999999999998752
Q ss_pred cchhccchhhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCC
Q 006442 490 PNYFEQNQAEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (645)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 563 (645)
.+|++|+.. .+.+..++.+|+...... . ....+..+++.+++. +..++++.+||||||||++||||++.+|+
T Consensus 85 i~~v~q~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral~~~p~ 162 (269)
T PRK13648 85 IGIVFQNPD-NQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDML-ERADYEPNALSGGQKQRVAIAGVLALNPS 162 (269)
T ss_pred eeEEEeChH-HhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCc-hhhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 234555432 234567889988664321 1 123567889999995 67789999999999999999999999999
Q ss_pred eEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 564 LLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 564 lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+|||||||++||+.++..+.+.|+++ +.|||+||||++++.. |||+++|++|++.. .|+.+++.
T Consensus 163 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~~-~g~~~~~~ 230 (269)
T PRK13648 163 VIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAME-ADHVIVMNKGTVYK-EGTPTEIF 230 (269)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhc-CCEEEEEECCEEEE-ecCHHHHh
Confidence 99999999999999999999999764 4599999999999986 99999999999985 46666654
No 447
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.2e-39 Score=370.60 Aligned_cols=206 Identities=26% Similarity=0.472 Sum_probs=173.6
Q ss_pred CCcEEEEEeeeeeeCCe---eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceeccc-------
Q 006442 421 GRSVVTIKNLEFGYEDR---LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP------- 490 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~---~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~------- 490 (645)
.++.|+++||+|+||.+ ++|+|+||.|++|+.+||||+|||||||++++|.|+++|++|+|.+||.++..
T Consensus 347 ~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr 426 (1228)
T KOG0055|consen 347 IKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLR 426 (1228)
T ss_pred cccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHH
Confidence 34569999999999976 48999999999999999999999999999999999999999999999988742
Q ss_pred ---chhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCC------hh----hhccCcCcCCHhHHHHHHHHHH
Q 006442 491 ---NYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFK------AD----MLDRKVSLLSGGEKARLAFCKF 557 (645)
Q Consensus 491 ---~~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~------~~----~~~~~~~~LSgGqkqrv~lAra 557 (645)
+.+.|. + ..+..|+.||+.++.++...+++.++++..+.. ++ .......+||||||||+|||||
T Consensus 427 ~~iglV~Qe--P-vlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARa 503 (1228)
T KOG0055|consen 427 SQIGLVSQE--P-VLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARA 503 (1228)
T ss_pred hhcCeeeec--h-hhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHH
Confidence 233443 2 557899999999998777766666666554431 01 1123334699999999999999
Q ss_pred HccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 558 l~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
|+++|+|||||||||+||+++++.++++|.+. +.|.|+|+|++.++.+ +|+|++|++|+|++ .|+-+++++.
T Consensus 504 lv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrn-aD~I~v~~~G~IvE-~G~h~ELi~~ 577 (1228)
T KOG0055|consen 504 LVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRN-ADKIAVMEEGKIVE-QGTHDELIAL 577 (1228)
T ss_pred HHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhc-cCEEEEEECCEEEE-ecCHHHHHhc
Confidence 99999999999999999999999999999976 4699999999999998 99999999999996 5776666543
No 448
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-38 Score=321.24 Aligned_cols=203 Identities=25% Similarity=0.373 Sum_probs=169.4
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC-----eeEEEECceecc--------
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR-----GGEVLLGEHNVL-------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~-----~G~i~~~g~~~~-------- 489 (645)
++|+++|++++|+++.+|+++||+|.+|++++|+|+||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 3 ~~l~~~~l~~~~~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~ 82 (251)
T PRK14249 3 PKIKIRGVNFFYHKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVN 82 (251)
T ss_pred ceEEEEEEEEEECCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHH
Confidence 4699999999998888999999999999999999999999999999999999987 699999997652
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhcc---c----cHHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHHHHH
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFC 555 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~----~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~lA 555 (645)
.+|++|+. .+.+ .|+.+|+...... . ..+.+...++.+++. .+..++++.+|||||||||+||
T Consensus 83 ~~~~i~~v~q~~--~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~la 159 (251)
T PRK14249 83 LRKRVGMVFQQP--NPFP-KSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLCIA 159 (251)
T ss_pred hhceEEEEecCC--ccCc-CcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHHHH
Confidence 22444442 3433 5999999764321 1 113355567777763 2356889999999999999999
Q ss_pred HHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||+.+|++|||||||++||+.++..+.++|.++ +.|||+||||++++.++||++++|++|++..+ ++.++..
T Consensus 160 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~-~~~~~~~ 234 (251)
T PRK14249 160 RVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEY-GRTGEIF 234 (251)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEe-CCHHHHH
Confidence 9999999999999999999999999999999876 36999999999999999999999999999854 6666554
No 449
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-38 Score=322.27 Aligned_cols=206 Identities=26% Similarity=0.387 Sum_probs=178.3
Q ss_pred EEEEEeeeeeeCC----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-C----CeeEEEECceecc-----
Q 006442 424 VVTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-P----RGGEVLLGEHNVL----- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-p----~~G~i~~~g~~~~----- 489 (645)
+++++|+++.|.. ..+++||||+|++||++||+|.|||||||+.++|+|+++ | .+|+|.++|.++.
T Consensus 1 lL~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~ 80 (316)
T COG0444 1 LLEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEK 80 (316)
T ss_pred CceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHH
Confidence 3789999999963 368999999999999999999999999999999999997 4 5789999998652
Q ss_pred ---------cchhccchhhcCCCCCCHHHHHHhhhcc---c-----cHHHHHHHHhhcCCChh--hhccCcCcCCHhHHH
Q 006442 490 ---------PNYFEQNQAEALDLDKTVLETVAEAAED---W-----RIDDIKGLLGRCNFKAD--MLDRKVSLLSGGEKA 550 (645)
Q Consensus 490 ---------~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~-----~~~~~~~~L~~~~l~~~--~~~~~~~~LSgGqkq 550 (645)
.++++|++...+++-.++.+.+...... . ..+++.++|+.+|+... ..+.+|++|||||||
T Consensus 81 ~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQ 160 (316)
T COG0444 81 ELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQ 160 (316)
T ss_pred HHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHHH
Confidence 3467888888899999998877654321 1 13468899999999754 679999999999999
Q ss_pred HHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChh
Q 006442 551 RLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYN 626 (645)
Q Consensus 551 rv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~ 626 (645)
||.||.||+.+|+|||.||||.+||...+..+.++|++. +.|+|+||||+..+.++||||+||..|+|++. |+.+
T Consensus 161 RV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE~-g~~~ 239 (316)
T COG0444 161 RVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVEE-GPVE 239 (316)
T ss_pred HHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEEe-CCHH
Confidence 999999999999999999999999999999999988753 56999999999999999999999999999974 6666
Q ss_pred HHHH
Q 006442 627 QVQS 630 (645)
Q Consensus 627 ~~~~ 630 (645)
++++
T Consensus 240 ~i~~ 243 (316)
T COG0444 240 EIFK 243 (316)
T ss_pred HHhc
Confidence 6554
No 450
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-38 Score=324.47 Aligned_cols=206 Identities=26% Similarity=0.351 Sum_probs=171.0
Q ss_pred CCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CeeEEEECceecc-----
Q 006442 420 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL----- 489 (645)
Q Consensus 420 ~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~----- 489 (645)
++.++|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 16 ~~~~~l~~~nl~~~~~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 16 PDHSVFEVEGVKVFYGGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred CCCceEEEeeEEEEeCCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 345689999999999988899999999999999999999999999999999999863 5899999997652
Q ss_pred -------cchhccchhhcCCCCCCHHHHHHhhhcc--c---cHHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHHHH
Q 006442 490 -------PNYFEQNQAEALDLDKTVLETVAEAAED--W---RIDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAF 554 (645)
Q Consensus 490 -------~~~~~q~~~~~l~~~~tv~e~v~~~~~~--~---~~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~l 554 (645)
.+|++|+. .+. ..|+.+|+...... . ..+.+...++.+++. .+..++++.+|||||||||+|
T Consensus 96 ~~~~~~~i~~v~q~~--~l~-~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~L 172 (274)
T PRK14265 96 SVKLRRQVGMVFQRP--NPF-PKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQRLCI 172 (274)
T ss_pred hHHHhhcEEEEccCC--ccc-cccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHHHhcCCcccCCHHHHHHHHH
Confidence 12445442 333 35999999764321 1 123355677777763 245678899999999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEe---------CCeEEeeCC
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVK---------GSNLQDYAG 623 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~---------~g~i~~~~~ 623 (645)
||||+.+|++|||||||++||+.++..+.++|.++ +.|||+||||++++.++|||+++|+ +|++++ .|
T Consensus 173 AraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~-~g 251 (274)
T PRK14265 173 ARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE-FS 251 (274)
T ss_pred HHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE-eC
Confidence 99999999999999999999999999999999876 3599999999999999999999997 799985 47
Q ss_pred ChhHHH
Q 006442 624 DYNQVQ 629 (645)
Q Consensus 624 ~~~~~~ 629 (645)
+.+++.
T Consensus 252 ~~~~~~ 257 (274)
T PRK14265 252 PTEQMF 257 (274)
T ss_pred CHHHHH
Confidence 777664
No 451
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-38 Score=324.77 Aligned_cols=205 Identities=24% Similarity=0.367 Sum_probs=171.9
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CeeEEEECceecc-------
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------- 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~------- 489 (645)
.++|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 19 ~~~l~i~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 19 APAMAAVNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred CcEEEEeeEEEEECCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 5689999999999988999999999999999999999999999999999999985 6999999997652
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhcc---ccH----HHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHHH
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAED---WRI----DDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFC 555 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~~~----~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~lA 555 (645)
.+|++|. ..+++ .|+.+|+...... ... ..+...++.+++.. +..++.+.+||||||||++||
T Consensus 99 ~~~~i~~v~q~--~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~LA 175 (276)
T PRK14271 99 FRRRVGMLFQR--PNPFP-MSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLA 175 (276)
T ss_pred HhhheEEeccC--CccCC-ccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHHH
Confidence 1344443 23444 7999999764311 121 23456788888853 245788999999999999999
Q ss_pred HHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 556 KFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 556 ral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|||+.+|+||||||||++||+.+++.+.+.|+++ ..|||+||||++++.++|||+++|++|++.. .++.+++.+
T Consensus 176 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~-~g~~~~~~~ 251 (276)
T PRK14271 176 RTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVE-EGPTEQLFS 251 (276)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHHh
Confidence 9999999999999999999999999999999876 4699999999999999999999999999985 466666643
No 452
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-38 Score=320.95 Aligned_cols=202 Identities=22% Similarity=0.346 Sum_probs=169.7
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CeeEEEECceecc---------
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~--------- 489 (645)
+|+++|+++.|+++++|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 3 ~l~~~~l~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~ 82 (250)
T PRK14262 3 IIEIENFSAYYGEKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEY 82 (250)
T ss_pred eEEEEeeEEEeCCceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHh
Confidence 69999999999888899999999999999999999999999999999999974 8999999997652
Q ss_pred ---cchhccchhhcCCCCCCHHHHHHhhhcc---c----cHHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHHHH
Q 006442 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED---W----RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCK 556 (645)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~----~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~lAr 556 (645)
.+|++|+ ..+. ..|+.+|+...... . ....+..+++.+++.. ...++++.+||||||||++|||
T Consensus 83 ~~~i~~~~q~--~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la~ 159 (250)
T PRK14262 83 RKKVGMVFQK--PTPF-PMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQQQRLCIAR 159 (250)
T ss_pred hhhEEEEecC--CccC-cccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHHHHHHHHHH
Confidence 1233443 2343 48999999764321 1 1223566788888742 2468899999999999999999
Q ss_pred HHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++.+..+||++++|++|++.. .|..+++.
T Consensus 160 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 233 (250)
T PRK14262 160 ALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIE-YGPTREIV 233 (250)
T ss_pred HHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHHH
Confidence 999999999999999999999999999999876 3599999999999999999999999999985 46666654
No 453
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-38 Score=318.51 Aligned_cols=201 Identities=23% Similarity=0.460 Sum_probs=164.2
Q ss_pred EEEEeeeeeeCC-eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cchh
Q 006442 425 VTIKNLEFGYED-RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNYF 493 (645)
Q Consensus 425 i~~~~v~~~y~~-~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~~ 493 (645)
|+++|++++|++ +.+++++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++. .+|+
T Consensus 3 l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 82 (229)
T cd03254 3 IEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGVV 82 (229)
T ss_pred EEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEEe
Confidence 789999999974 57999999999999999999999999999999999999999999999997652 2344
Q ss_pred ccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCC----------hhhhccCcCcCCHhHHHHHHHHHHHccCCC
Q 006442 494 EQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFK----------ADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~----------~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 563 (645)
+|+. .+. ..|+.+|+..........++...++.+++. ....++.+.+|||||||||+|||||+.+|+
T Consensus 83 ~q~~--~~~-~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 83 LQDT--FLF-SGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred cCCc--hhh-hhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 5442 333 359999987653322333344444444331 123456678999999999999999999999
Q ss_pred eEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 564 LLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 564 lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
+|||||||++||+.+++.+.+.|.++ +.|||+||||++++.. ||++++|++|++.. .++++++.+
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~i~~l~~g~~~~-~~~~~~~~~ 226 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKN-ADKILVLDDGKIIE-EGTHDELLA 226 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-CCEEEEEeCCeEEE-eCCHHHHHh
Confidence 99999999999999999999999876 3599999999999975 99999999999985 577777654
No 454
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.2e-38 Score=323.58 Aligned_cols=206 Identities=24% Similarity=0.403 Sum_probs=159.8
Q ss_pred EEEEeEEEEeCC---eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEE
Q 006442 98 VKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIA 164 (645)
Q Consensus 98 i~i~nls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~ 164 (645)
|+++|++++|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 478999999964 469999999999999999999999999999999999999999999998732 2599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
|++|++.++. .|++||+....... . . +.+....+ ... +.+++.
T Consensus 81 ~~~q~~~~~~-~tv~e~l~~~~~~~-~-~---~~~~~~~~---------------------------~~~----~~~~~~ 123 (238)
T cd03249 81 LVSQEPVLFD-GTIAENIRYGKPDA-T-D---EEVEEAAK---------------------------KAN----IHDFIM 123 (238)
T ss_pred EECCchhhhh-hhHHHHhhccCCCC-C-H---HHHHHHHH---------------------------HcC----hHHHHH
Confidence 9999987754 69999985321100 0 0 00000000 000 111122
Q ss_pred hc--CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHH
Q 006442 245 EL--GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLD 320 (645)
Q Consensus 245 ~l--gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~ 320 (645)
.+ ++. ...++.+.+|||||||||+|||||+.+|++|||||||++||+.+++.+.+.|++ .|+|||++||+++++.
T Consensus 124 ~l~~~~~-~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~ 202 (238)
T cd03249 124 SLPDGYD-TLVGERGSQLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIR 202 (238)
T ss_pred hhccccc-eeeccCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHh
Confidence 22 332 345677899999999999999999999999999999999999999999988743 5789999999999997
Q ss_pred hhcCeEEEEcCceeEEeccChHH
Q 006442 321 QLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 321 ~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
.||+++++++|++ .+.|+..+
T Consensus 203 -~~d~v~~l~~G~i-~~~~~~~~ 223 (238)
T cd03249 203 -NADLIAVLQNGQV-VEQGTHDE 223 (238)
T ss_pred -hCCEEEEEECCEE-EEeCCHHH
Confidence 8999999999997 34555433
No 455
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.4e-38 Score=360.98 Aligned_cols=211 Identities=26% Similarity=0.393 Sum_probs=165.6
Q ss_pred cEEEEeEEEEe-CCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCc----------eEEE
Q 006442 97 GVKLENISKSY-KGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIAF 165 (645)
Q Consensus 97 ~i~i~nls~~y-~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~----------~i~~ 165 (645)
.|+++|++|.| +++++|+|+||+|++|+++||||+||||||||+++|+|++ |++|+|.++|.+. .|+|
T Consensus 349 ~i~~~~vsf~~~~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~ 427 (588)
T PRK11174 349 TIEAEDLEILSPDGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSW 427 (588)
T ss_pred eEEEEeeEEeccCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEE
Confidence 49999999766 5567999999999999999999999999999999999999 9999999997542 5999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
|+|+|++ ++.||+|||..+-.+ .. .+++.++++.+ .+.+.+.++ .
T Consensus 428 v~Q~~~L-F~~TI~eNI~~g~~~-~~----~eei~~al~~a---------------------------~l~~~i~~l--p 472 (588)
T PRK11174 428 VGQNPQL-PHGTLRDNVLLGNPD-AS----DEQLQQALENA---------------------------WVSEFLPLL--P 472 (588)
T ss_pred ecCCCcC-CCcCHHHHhhcCCCC-CC----HHHHHHHHHHh---------------------------CHHHHHHhc--c
Confidence 9999987 678999999743111 00 01222222211 111122221 1
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhc
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~ 323 (645)
-|+.+..+++ ..+||||||||++|||||+++|+|||||||||+||+++.+.+.+.|.+ .++|+|+|||+++.+.. |
T Consensus 473 ~G~dT~vge~-G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~-a 550 (588)
T PRK11174 473 QGLDTPIGDQ-AAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQ-W 550 (588)
T ss_pred cccccccccC-CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHh-C
Confidence 1444444433 678999999999999999999999999999999999999999887754 57999999999998875 9
Q ss_pred CeEEEEcCceeEEeccChHHHHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQYVL 346 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~~~~ 346 (645)
|+|+++++|++ ...|++++.+.
T Consensus 551 D~Iivl~~G~i-~e~G~~~eL~~ 572 (588)
T PRK11174 551 DQIWVMQDGQI-VQQGDYAELSQ 572 (588)
T ss_pred CEEEEEeCCeE-eecCCHHHHHh
Confidence 99999999998 45677665543
No 456
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=4.9e-38 Score=315.47 Aligned_cols=190 Identities=30% Similarity=0.429 Sum_probs=163.7
Q ss_pred EEEEeeeeeeCC----eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------
Q 006442 425 VTIKNLEFGYED----RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------- 489 (645)
Q Consensus 425 i~~~~v~~~y~~----~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------- 489 (645)
++++|+++.|++ +.+|+++||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 789999999974 67999999999999999999999999999999999999999999999998652
Q ss_pred --cchhccchhhcCCCCCCHHHHHHhhhcc---cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHcc
Q 006442 490 --PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (645)
Q Consensus 490 --~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~ 560 (645)
.+|++|+ ..+.+..|+.+|+...... .. ...+.++++++++. +..++++.+||+|||||++|||||+.
T Consensus 82 ~~i~~~~q~--~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qrv~laral~~ 158 (220)
T TIGR02982 82 RNIGYIFQA--HNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLG-DHLDYYPHNLSGGQKQRVAIARALVH 158 (220)
T ss_pred hheEEEcCC--hhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCh-hhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 1344444 3455668999998764321 11 23578899999994 67789999999999999999999999
Q ss_pred CCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeE
Q 006442 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (645)
Q Consensus 561 ~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i 618 (645)
+|++|||||||++||+.++..+.+.|+++ +.|||+||||++.. ++||+|++|++|++
T Consensus 159 ~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~-~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 159 RPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRIL-DVADRIVHMEDGKL 219 (220)
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHH-hhCCEEEEEECCEE
Confidence 99999999999999999999999988754 46999999999864 78999999999986
No 457
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.2e-38 Score=355.44 Aligned_cols=196 Identities=24% Similarity=0.354 Sum_probs=171.1
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------cc
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~ 491 (645)
++|+++|+++.|+++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+
T Consensus 3 ~~i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 82 (501)
T PRK10762 3 ALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGIG 82 (501)
T ss_pred ceEEEeeeEEEeCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCEE
Confidence 4799999999998888999999999999999999999999999999999999999999999997652 23
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhcc--------cc--HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccC
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAED--------WR--IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~--------~~--~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~ 561 (645)
|++|+ ..+.+..|+.+|+...... +. ...+.++++.+++. +..++++.+|||||||||+|||||+.+
T Consensus 83 ~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~ 159 (501)
T PRK10762 83 IIHQE--LNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLR-FSSDKLVGELSIGEQQMVEIAKVLSFE 159 (501)
T ss_pred EEEcc--hhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCC-CCccCchhhCCHHHHHHHHHHHHHhcC
Confidence 45554 3456778999999764210 11 23467889999995 567899999999999999999999999
Q ss_pred CCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEee
Q 006442 562 STLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDY 621 (645)
Q Consensus 562 p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~ 621 (645)
|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++..
T Consensus 160 p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~ 222 (501)
T PRK10762 160 SKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAE 222 (501)
T ss_pred CCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEe
Confidence 9999999999999999999999888764 46999999999999999999999999999753
No 458
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=3.3e-38 Score=320.05 Aligned_cols=187 Identities=28% Similarity=0.373 Sum_probs=158.9
Q ss_pred eeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc---------cchhccchhhcCC
Q 006442 432 FGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------PNYFEQNQAEALD 502 (645)
Q Consensus 432 ~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------~~~~~q~~~~~l~ 502 (645)
.+|+.+++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|+.+. ...+.
T Consensus 29 ~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 107 (236)
T cd03267 29 RKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQ-KTQLW 107 (236)
T ss_pred cccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCC-ccccC
Confidence 5567778999999999999999999999999999999999999999999999987641 1233322 23455
Q ss_pred CCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCH
Q 006442 503 LDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDI 576 (645)
Q Consensus 503 ~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~ 576 (645)
+..|+.+++...... . ....+..+++.+++. +..++++..||||||||++|||||+.+|++|||||||++||+
T Consensus 108 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~ 186 (236)
T cd03267 108 WDLPVIDSFYLLAAIYDLPPARFKKRLDELSELLDLE-ELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDV 186 (236)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCH
Confidence 678999998653221 1 123466788999994 567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEe
Q 006442 577 PSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQD 620 (645)
Q Consensus 577 ~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~ 620 (645)
.+++.+.++|.++ +.|||+||||++++.++||++++|++|++..
T Consensus 187 ~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 234 (236)
T cd03267 187 VAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLY 234 (236)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEe
Confidence 9999999999875 4599999999999999999999999999864
No 459
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=6.2e-38 Score=321.16 Aligned_cols=202 Identities=28% Similarity=0.400 Sum_probs=168.0
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcC--CCCCeeEEEECceeccc---------
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGL--EKPRGGEVLLGEHNVLP--------- 490 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~--~~p~~G~i~~~g~~~~~--------- 490 (645)
+++|+++|+++.|+++.+|+++||+|++||++||+|+||||||||+++|+|+ ++|++|+|.++|.++..
T Consensus 5 ~~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 5 KPILEIKNLHASVNENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred CceEEEEeEEEEeCCEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 3479999999999888899999999999999999999999999999999998 58999999999976521
Q ss_pred --chhccchhhcCCCCCCHHHHHHhhhc---------ccc----HHHHHHHHhhcCCChhhhccCcC-cCCHhHHHHHHH
Q 006442 491 --NYFEQNQAEALDLDKTVLETVAEAAE---------DWR----IDDIKGLLGRCNFKADMLDRKVS-LLSGGEKARLAF 554 (645)
Q Consensus 491 --~~~~q~~~~~l~~~~tv~e~v~~~~~---------~~~----~~~~~~~L~~~~l~~~~~~~~~~-~LSgGqkqrv~l 554 (645)
.++.| ...+.+..++.+++..... ... ...+.++|+.+++.....++++. .|||||||||+|
T Consensus 85 ~~~~~~q--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~l 162 (252)
T CHL00131 85 GIFLAFQ--YPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNEI 162 (252)
T ss_pred eEEEEec--cccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccccCCCHHHHHHHHH
Confidence 12223 2344556788888764321 011 13467789999996445678887 599999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhh-CCEEEEEeCCeEEeeCCChh
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQI-VNRVVEVKGSNLQDYAGDYN 626 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~-~d~v~~l~~g~i~~~~~~~~ 626 (645)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+ ||++++|++|+++. .++.+
T Consensus 163 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~-~~~~~ 237 (252)
T CHL00131 163 LQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIK-TGDAE 237 (252)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEE-ecChh
Confidence 99999999999999999999999999999999865 46999999999999887 89999999999985 45555
No 460
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=322.91 Aligned_cols=205 Identities=27% Similarity=0.361 Sum_probs=171.4
Q ss_pred CCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCeeEEEECceecc------
Q 006442 421 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL------ 489 (645)
Q Consensus 421 ~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~------ 489 (645)
..++|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 22 ~~~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~ 101 (272)
T PRK14236 22 EQTALEVRNLNLFYGDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDV 101 (272)
T ss_pred CCcEEEEEEEEEEECCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCH
Confidence 4558999999999988889999999999999999999999999999999999987 48999999998753
Q ss_pred ------cchhccchhhcCCCCCCHHHHHHhhhcc----c---cHHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHH
Q 006442 490 ------PNYFEQNQAEALDLDKTVLETVAEAAED----W---RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLA 553 (645)
Q Consensus 490 ------~~~~~q~~~~~l~~~~tv~e~v~~~~~~----~---~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~ 553 (645)
.+|++|. ..++. .|+.+|+...... . ....+.++++.+++.. +..++.+.+|||||||||+
T Consensus 102 ~~~~~~i~~v~q~--~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~ 178 (272)
T PRK14236 102 AELRRRVGMVFQR--PNPFP-KSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLSGGQQQRLV 178 (272)
T ss_pred HHHhccEEEEecC--CccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHHH
Confidence 1234443 23444 4999999754221 1 1234667788888742 3467889999999999999
Q ss_pred HHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 554 FCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 554 lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++.++|||+++|++|++.. .|+.+++.
T Consensus 179 laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 255 (272)
T PRK14236 179 IARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVE-YGDTDTLF 255 (272)
T ss_pred HHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEe-cCCHHHHh
Confidence 999999999999999999999999999999999866 4699999999999999999999999999985 46666654
No 461
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-38 Score=317.27 Aligned_cols=201 Identities=27% Similarity=0.377 Sum_probs=173.1
Q ss_pred EEEEEeeeeeeCCe------------------------eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCee
Q 006442 424 VVTIKNLEFGYEDR------------------------LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGG 479 (645)
Q Consensus 424 ~i~~~~v~~~y~~~------------------------~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G 479 (645)
.|+++||++-||.+ .-++++||+|+.||+..|.|-+|||||||+++|.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 47888888877631 137899999999999999999999999999999999999999
Q ss_pred EEEECceeccc--------------chhccchhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhcc
Q 006442 480 EVLLGEHNVLP--------------NYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDR 539 (645)
Q Consensus 480 ~i~~~g~~~~~--------------~~~~q~~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~ 539 (645)
+|.++|.++.. ..++| ...+.|..||.+|+.++... ...+.+.++|+.+|+. ...++
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ--~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~-~~~~~ 160 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQ--SFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLE-GYADK 160 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhh--hhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCch-hhhhc
Confidence 99999988631 23343 45788999999999987542 2345688999999994 78899
Q ss_pred CcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhCCEEEEEeC
Q 006442 540 KVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISE----YKGTVITVSHDRYFVKQIVNRVVEVKG 615 (645)
Q Consensus 540 ~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~----~~~tvi~vsHd~~~i~~~~d~v~~l~~ 615 (645)
+|.+|||||||||.|||||+.+|+|||||||+|+|||--+..|++.|.+ .++|||+||||++++.++.|||..|++
T Consensus 161 yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkd 240 (386)
T COG4175 161 YPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKD 240 (386)
T ss_pred CcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecC
Confidence 9999999999999999999999999999999999999999999987754 467999999999999999999999999
Q ss_pred CeEEeeCCChhHH
Q 006442 616 SNLQDYAGDYNQV 628 (645)
Q Consensus 616 g~i~~~~~~~~~~ 628 (645)
|+|+. .|.++++
T Consensus 241 G~ivQ-~Gtp~eI 252 (386)
T COG4175 241 GEIVQ-VGTPEEI 252 (386)
T ss_pred CeEEE-eCCHHHH
Confidence 99985 4544443
No 462
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4.6e-38 Score=319.16 Aligned_cols=200 Identities=24% Similarity=0.476 Sum_probs=162.7
Q ss_pred EEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cch
Q 006442 425 VTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (645)
Q Consensus 425 i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (645)
|+++|++++|+. +++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 478999999963 57999999999999999999999999999999999999999999999997652 245
Q ss_pred hccchhhcCCCCCCHHHHHHhhhccccHHHHH---------HHHhhc--CCChhhhccCcCcCCHhHHHHHHHHHHHccC
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDDIK---------GLLGRC--NFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~---------~~L~~~--~l~~~~~~~~~~~LSgGqkqrv~lAral~~~ 561 (645)
++|+. .+ +..|+.+|+...........+. +.+..+ ++. ...++++.+|||||||||+|||||+.+
T Consensus 81 ~~q~~--~~-~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~~~~~~~LSgG~~qrv~laral~~~ 156 (237)
T cd03252 81 VLQEN--VL-FNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYD-TIVGEQGAGLSGGQRQRIAIARALIHN 156 (237)
T ss_pred EcCCc--hh-ccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCccccc-chhhcCCCcCCHHHHHHHHHHHHHhhC
Confidence 55543 33 3579999997643212222222 233333 332 335678899999999999999999999
Q ss_pred CCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 562 STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 562 p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|++|||||||++||+.++..+.+.|.++ +.|||++|||++++. .||++++|++|++.. .++.+++.+
T Consensus 157 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~-~~~~~~~~~ 225 (237)
T cd03252 157 PRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVK-NADRIIVMEKGRIVE-QGSHDELLA 225 (237)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHH-hCCEEEEEECCEEEE-EcCHHHHHh
Confidence 9999999999999999999999999875 359999999999996 599999999999985 467766654
No 463
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.7e-38 Score=357.03 Aligned_cols=210 Identities=23% Similarity=0.404 Sum_probs=172.7
Q ss_pred CccEEEEeEEEEeC-----------CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---
Q 006442 95 SSGVKLENISKSYK-----------GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN--- 160 (645)
Q Consensus 95 ~~~i~i~nls~~y~-----------~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~--- 160 (645)
.++|+++|++++|+ ++++|+++||+|++|++++|+||||||||||+++|+|+++ ++|+|.++|.+
T Consensus 273 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~i~~~g~~i~~ 351 (529)
T PRK15134 273 SPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN-SQGEIWFDGQPLHN 351 (529)
T ss_pred CCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcEEEECCEEccc
Confidence 45799999999995 3569999999999999999999999999999999999985 89999998631
Q ss_pred ----------ceEEEEeccC--ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHH
Q 006442 161 ----------MKIAFLSQEF--EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQ 228 (645)
Q Consensus 161 ----------~~i~~v~Q~~--~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (645)
..++|++|++ .+++..||.||+...+.. .. .
T Consensus 352 ~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~---------------~~----------------------~ 394 (529)
T PRK15134 352 LNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRV---------------HQ----------------------P 394 (529)
T ss_pred cchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHh---------------cc----------------------c
Confidence 2599999997 366678999998532100 00 0
Q ss_pred hCChhcHHHHHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc----c
Q 006442 229 AVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG----K 304 (645)
Q Consensus 229 ~~~~~~~~~~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~----~ 304 (645)
..+....++++.++++.+|+..+..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.+.++|+ +
T Consensus 395 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~ 474 (529)
T PRK15134 395 TLSAAQREQQVIAVMEEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQK 474 (529)
T ss_pred cCChHHHHHHHHHHHHHcCCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHh
Confidence 001112234567788889996446789999999999999999999999999999999999999999999998875 2
Q ss_pred CCCeEEEEecCHHHHHhhcCeEEEEcCceeEEeccChHH
Q 006442 305 QDVPMVIISHDRAFLDQLCTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 305 ~g~tvIivsHd~~~l~~~~d~i~~l~~G~~~~~~g~~~~ 343 (645)
.|+|||+||||++++..+||+|+++++|++. ..|...+
T Consensus 475 ~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~-~~~~~~~ 512 (529)
T PRK15134 475 HQLAYLFISHDLHVVRALCHQVIVLRQGEVV-EQGDCER 512 (529)
T ss_pred hCCEEEEEeCCHHHHHHhcCeEEEEECCEEE-EEcCHHH
Confidence 4899999999999999999999999999974 4555444
No 464
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3e-39 Score=304.58 Aligned_cols=204 Identities=25% Similarity=0.422 Sum_probs=181.0
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------cc
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------PN 491 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~~ 491 (645)
..+.++|+.++|+.+.+++++||+|++||++|+.||||+||||.+.++.|+.+|++|.|.+++.++. .+
T Consensus 3 ~~L~a~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGig 82 (243)
T COG1137 3 STLVAENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGIG 82 (243)
T ss_pred cEEEehhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCcc
Confidence 3588999999999999999999999999999999999999999999999999999999999999873 35
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhcc--------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCC
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAED--------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPST 563 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~--------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 563 (645)
|++|. ...+-.+||.+|+...... ....++..+|+.|++ .+..+++..+||||||+|+-|||||+.+|+
T Consensus 83 YLpQE--~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i-~hlr~~~a~sLSGGERRR~EIARaLa~~P~ 159 (243)
T COG1137 83 YLPQE--ASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHI-THLRDSKAYSLSGGERRRVEIARALAANPK 159 (243)
T ss_pred ccccc--chHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhch-HHHhcCcccccccchHHHHHHHHHHhcCCC
Confidence 77765 4567889999999865431 112346689999999 588899999999999999999999999999
Q ss_pred eEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 564 LLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 564 lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
.++||||++|+||-+...+++++... +..|++.-|+..+...+|||.++|..|++.. .|+.++..+
T Consensus 160 fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla-~G~p~ei~~ 228 (243)
T COG1137 160 FILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLA-EGSPEEIVN 228 (243)
T ss_pred EEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEe-cCCHHHHhc
Confidence 99999999999999999999988765 4599999999999999999999999999985 688888764
No 465
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.3e-38 Score=366.93 Aligned_cols=202 Identities=26% Similarity=0.504 Sum_probs=175.4
Q ss_pred cEEEEEeeeeeeC--CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------c
Q 006442 423 SVVTIKNLEFGYE--DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------P 490 (645)
Q Consensus 423 ~~i~~~~v~~~y~--~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~ 490 (645)
..|+++||+|+|+ ++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. .
T Consensus 450 ~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i 529 (686)
T TIGR03797 450 GAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQL 529 (686)
T ss_pred ceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhcc
Confidence 4599999999995 357999999999999999999999999999999999999999999999998863 2
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhh----------hccCcCcCCHhHHHHHHHHHHHcc
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADM----------LDRKVSLLSGGEKARLAFCKFMVK 560 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~----------~~~~~~~LSgGqkqrv~lAral~~ 560 (645)
+|++|+. ..++.|++||+..+.+ ...+++.++++.+++.... ......+||||||||++||||+++
T Consensus 530 ~~v~Q~~---~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~ 605 (686)
T TIGR03797 530 GVVLQNG---RLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVR 605 (686)
T ss_pred EEEccCC---ccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhc
Confidence 4555542 3467899999998765 6677888888888874221 112345799999999999999999
Q ss_pred CCCeEEeeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 561 ~p~lLlLDEPt~~LD~~s~~~l~~~l~~~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
+|++||||||||+||+++++.+.+.|++.+.|+|+|||+++.+.. ||+|++|++|++++ .|+.+++.+
T Consensus 606 ~p~iLiLDEpTS~LD~~te~~i~~~L~~~~~T~IiItHr~~~i~~-~D~Iivl~~G~iv~-~G~~~~Ll~ 673 (686)
T TIGR03797 606 KPRILLFDEATSALDNRTQAIVSESLERLKVTRIVIAHRLSTIRN-ADRIYVLDAGRVVQ-QGTYDELMA 673 (686)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhCCeEEEEecChHHHHc-CCEEEEEECCEEEE-ECCHHHHHh
Confidence 999999999999999999999999999888899999999999976 99999999999986 588887764
No 466
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2.7e-38 Score=306.86 Aligned_cols=162 Identities=33% Similarity=0.478 Sum_probs=144.5
Q ss_pred EEEEeEEEEeCCe--eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC---------ceEEEE
Q 006442 98 VKLENISKSYKGV--TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN---------MKIAFL 166 (645)
Q Consensus 98 i~i~nls~~y~~~--~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~---------~~i~~v 166 (645)
|+++|++++|++. ++++|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 80 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISVL 80 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEEE
Confidence 4789999999765 69999999999999999999999999999999999999999999998742 359999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.++ ..|++||+
T Consensus 81 ~q~~~~~-~~tv~~~i---------------------------------------------------------------- 95 (178)
T cd03247 81 NQRPYLF-DTTLRNNL---------------------------------------------------------------- 95 (178)
T ss_pred ccCCeee-cccHHHhh----------------------------------------------------------------
Confidence 9998764 35665552
Q ss_pred CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhcC
Q 006442 247 GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 247 gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~d 324 (645)
+.+||||||||++|||||+.+|++|||||||++||+.+++.+.+.|++ .+.|||++||+++++. .||
T Consensus 96 ----------~~~LS~G~~qrv~laral~~~p~~lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~-~~d 164 (178)
T cd03247 96 ----------GRRFSGGERQRLALARILLQDAPIVLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIE-HMD 164 (178)
T ss_pred ----------cccCCHHHHHHHHHHHHHhcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH-hCC
Confidence 467999999999999999999999999999999999999999888753 4789999999999997 699
Q ss_pred eEEEEcCceeE
Q 006442 325 KIVETEMGVSR 335 (645)
Q Consensus 325 ~i~~l~~G~~~ 335 (645)
+++++++|++.
T Consensus 165 ~~~~l~~g~i~ 175 (178)
T cd03247 165 KILFLENGKII 175 (178)
T ss_pred EEEEEECCEEE
Confidence 99999999873
No 467
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-38 Score=321.10 Aligned_cols=202 Identities=26% Similarity=0.376 Sum_probs=168.8
Q ss_pred EEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCeeEEEECceecc----------
Q 006442 425 VTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL---------- 489 (645)
Q Consensus 425 i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~---------- 489 (645)
-+++|++++|+++.+|+++||+|.+||+++|+|+||||||||+++|+|+.+ |++|+|.++|.++.
T Consensus 6 ~~~~~l~~~~~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 85 (251)
T PRK14244 6 ASVKNLNLWYGSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLR 85 (251)
T ss_pred EEeeeEEEEECCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHh
Confidence 578999999988889999999999999999999999999999999999986 47999999997652
Q ss_pred --cchhccchhhcCCCCCCHHHHHHhhhc--c------ccHHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHHHH
Q 006442 490 --PNYFEQNQAEALDLDKTVLETVAEAAE--D------WRIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCK 556 (645)
Q Consensus 490 --~~~~~q~~~~~l~~~~tv~e~v~~~~~--~------~~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~lAr 556 (645)
.+|++|+. .+.+ .|+.+|+..... . .....+..+++.+++.. ...++.+.+|||||||||+|||
T Consensus 86 ~~i~~v~q~~--~~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~lar 162 (251)
T PRK14244 86 AKVGMVFQKP--NPFP-KSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRLCIAR 162 (251)
T ss_pred hhEEEEecCc--cccc-CCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHHHHHH
Confidence 13445542 3434 499999875421 1 11234667889999853 2457889999999999999999
Q ss_pred HHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++.++|||+++|++|++.. .+..+++..
T Consensus 163 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~ 237 (251)
T PRK14244 163 AIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVE-YNTTQEIFK 237 (251)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEE-eCCHHHHhc
Confidence 999999999999999999999999999999865 4699999999999999999999999999985 466666543
No 468
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9e-39 Score=295.94 Aligned_cols=205 Identities=25% Similarity=0.377 Sum_probs=178.4
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceeccc------------
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP------------ 490 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~------------ 490 (645)
+.|+++|+.++||...+|++|||+-..|+.|.|+|.+||||||+|+||.=+.+|+.|.|.++|..+..
T Consensus 5 ~~l~v~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ad 84 (256)
T COG4598 5 NALEVEDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPAD 84 (256)
T ss_pred cceehhHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeCC
Confidence 35899999999999999999999999999999999999999999999999999999999999876521
Q ss_pred -----------chhccchhhcCCCCCCHHHHHHhhhc-------cccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHH
Q 006442 491 -----------NYFEQNQAEALDLDKTVLETVAEAAE-------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARL 552 (645)
Q Consensus 491 -----------~~~~q~~~~~l~~~~tv~e~v~~~~~-------~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv 552 (645)
+++.| ..++...+|+.+|+..+.- ....+.+..+|.++|+. +..+.+|..||||||||+
T Consensus 85 ~~q~~r~Rs~L~mVFQ--~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~-ek~~~YP~~LSGGQQQR~ 161 (256)
T COG4598 85 KRQLQRLRTRLGMVFQ--HFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIA-EKADAYPAHLSGGQQQRV 161 (256)
T ss_pred HHHHHHHHHHhhHhhh--hcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCch-hhhhcCccccCchHHHHH
Confidence 12233 3456678999999987632 22345688999999994 677899999999999999
Q ss_pred HHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 553 AFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 553 ~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
+|||||+.+|++++.|||||+|||+-...+.+.+++. +.|.++|||.+.|+.+++++|+++++|.|.+ .|++++.+
T Consensus 162 aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE-~G~P~qvf 240 (256)
T COG4598 162 AIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEE-EGPPEQVF 240 (256)
T ss_pred HHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecc-cCChHHHh
Confidence 9999999999999999999999999998888887754 6799999999999999999999999999975 68888776
Q ss_pred HH
Q 006442 630 SL 631 (645)
Q Consensus 630 ~~ 631 (645)
..
T Consensus 241 ~n 242 (256)
T COG4598 241 GN 242 (256)
T ss_pred cC
Confidence 43
No 469
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-37 Score=339.94 Aligned_cols=207 Identities=22% Similarity=0.284 Sum_probs=167.9
Q ss_pred ccEEEEeEEEEeCC---eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCceEEEEeccCcc
Q 006442 96 SGVKLENISKSYKG---VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEV 172 (645)
Q Consensus 96 ~~i~i~nls~~y~~---~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~~i~~v~Q~~~~ 172 (645)
++++++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|... ++.+.+.+
T Consensus 20 ~mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~---~i~~~~~l 96 (549)
T PRK13545 20 PFDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA---LIAISSGL 96 (549)
T ss_pred ceeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee---eEEecccc
Confidence 46999999999976 4699999999999999999999999999999999999999999999987542 33344455
Q ss_pred CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCccc
Q 006442 173 SMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADD 252 (645)
Q Consensus 173 ~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~~~ 252 (645)
.+..|++||+..... .. ..+.....+++.++++.+|+. +.
T Consensus 97 ~~~lTV~EnL~l~~~---------------~~------------------------~~~~~e~~e~i~elLe~lgL~-~~ 136 (549)
T PRK13545 97 NGQLTGIENIELKGL---------------MM------------------------GLTKEKIKEIIPEIIEFADIG-KF 136 (549)
T ss_pred CCCCcHHHHHHhhhh---------------hc------------------------CCCHHHHHHHHHHHHHHcCCh-hH
Confidence 566799999852100 00 001112233455677778885 56
Q ss_pred ccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhhcCeEEEE
Q 006442 253 GDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQLCTKIVET 329 (645)
Q Consensus 253 ~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~~d~i~~l 329 (645)
.++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++|+ +.|+|||++|||++++..+||+++++
T Consensus 137 ld~~~~~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL 216 (549)
T PRK13545 137 IYQPVKTYSSGMKSRLGFAISVHINPDILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWL 216 (549)
T ss_pred hhCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEE
Confidence 788899999999999999999999999999999999999999999988774 45899999999999999999999999
Q ss_pred cCceeEEeccChHHHHH
Q 006442 330 EMGVSRTYEGNYSQYVL 346 (645)
Q Consensus 330 ~~G~~~~~~g~~~~~~~ 346 (645)
++|++. ..|..++...
T Consensus 217 ~~GkIv-~~G~~~el~~ 232 (549)
T PRK13545 217 HYGQVK-EYGDIKEVVD 232 (549)
T ss_pred ECCEEE-EECCHHHHHh
Confidence 999984 4566555443
No 470
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-38 Score=322.77 Aligned_cols=204 Identities=25% Similarity=0.321 Sum_probs=168.8
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCeeEEEECceecc--------
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNVL-------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~~-------- 489 (645)
++|+++||++.|+++++|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 9 ~~l~i~~v~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 88 (264)
T PRK14243 9 TVLRTENLNVYYGSFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPVE 88 (264)
T ss_pred eEEEEeeeEEEECCEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChHH
Confidence 47999999999988889999999999999999999999999999999999986 47999999997652
Q ss_pred ----cchhccchhhcCCCCCCHHHHHHhhhccc-----cHHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHHHHH
Q 006442 490 ----PNYFEQNQAEALDLDKTVLETVAEAAEDW-----RIDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCKF 557 (645)
Q Consensus 490 ----~~~~~q~~~~~l~~~~tv~e~v~~~~~~~-----~~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~lAra 557 (645)
.+|+.|+. .+.. .|+.+|+....... ..+.+..+++.+++.. ...++++.+||||||||++||||
T Consensus 89 ~~~~i~~v~q~~--~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~lara 165 (264)
T PRK14243 89 VRRRIGMVFQKP--NPFP-KSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCIARA 165 (264)
T ss_pred HhhhEEEEccCC--cccc-ccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHHHHH
Confidence 13444432 3333 59999997643211 1233556677777631 24578899999999999999999
Q ss_pred HccCCCeEEeeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhCCEEEEEe---------CCeEEeeCCChh
Q 006442 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYK--GTVITVSHDRYFVKQIVNRVVEVK---------GSNLQDYAGDYN 626 (645)
Q Consensus 558 l~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~~--~tvi~vsHd~~~i~~~~d~v~~l~---------~g~i~~~~~~~~ 626 (645)
|+.+|++|||||||++||+.++..+.+.|.++. .|||+||||++++.++|||+++|+ +|++++ .+..+
T Consensus 166 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~-~~~~~ 244 (264)
T PRK14243 166 IAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE-FDRTE 244 (264)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE-eCCHH
Confidence 999999999999999999999999999998763 599999999999999999999998 799985 46666
Q ss_pred HHHH
Q 006442 627 QVQS 630 (645)
Q Consensus 627 ~~~~ 630 (645)
++.+
T Consensus 245 ~~~~ 248 (264)
T PRK14243 245 KIFN 248 (264)
T ss_pred HHHh
Confidence 6643
No 471
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=319.98 Aligned_cols=207 Identities=19% Similarity=0.238 Sum_probs=166.4
Q ss_pred ccEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC-----CccEEEEcCCC----------
Q 006442 96 SGVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP-----DSGNVIKAKSN---------- 160 (645)
Q Consensus 96 ~~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p-----~~G~I~~~~~~---------- 160 (645)
..+.+++++++|++.++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|.+
T Consensus 7 ~~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~ 86 (261)
T PRK14263 7 IVMDCKLDKIFYGNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVV 86 (261)
T ss_pred ceEEEEeEEEEeCCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHh
Confidence 458999999999988899999999999999999999999999999999999986 79999998642
Q ss_pred --ceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHH
Q 006442 161 --MKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAK 238 (645)
Q Consensus 161 --~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (645)
..++|++|++.++ ..|+.||+....... ... .....+
T Consensus 87 ~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~---------------------------------------~~~-~~~~~~ 125 (261)
T PRK14263 87 VRRYIGMVFQQPNPF-SMSIFDNVAFGLRLN---------------------------------------RYK-GDLGDR 125 (261)
T ss_pred hhhceEEEecCCccc-cccHHHHHHHHHhhc---------------------------------------Cch-HHHHHH
Confidence 2499999998875 689999985321000 000 001123
Q ss_pred HHhhchhcCCCcc---cccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEe
Q 006442 239 VSKLMPELGFTAD---DGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIIS 313 (645)
Q Consensus 239 i~~ll~~lgl~~~---~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivs 313 (645)
+.++++.+|+... ..++++.+|||||+||++|||||+.+|++|||||||+|||+.++.++.++|++ .+.|||++|
T Consensus 126 ~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~is 205 (261)
T PRK14263 126 VKHALQGAALWDEVKDKLKVSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVT 205 (261)
T ss_pred HHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 4445555555321 23466889999999999999999999999999999999999999999988753 468999999
Q ss_pred cCHHHHHhhcCeEEEEc--------CceeEEeccChHHH
Q 006442 314 HDRAFLDQLCTKIVETE--------MGVSRTYEGNYSQY 344 (645)
Q Consensus 314 Hd~~~l~~~~d~i~~l~--------~G~~~~~~g~~~~~ 344 (645)
|+++++.++||+|++++ +|++. ..|..+++
T Consensus 206 H~~~~i~~~~d~v~~l~~~~~~~~~~G~i~-~~g~~~~~ 243 (261)
T PRK14263 206 HNMQQAIRVADTTAFFSVDISQGTRTGYLV-EMGPTAQI 243 (261)
T ss_pred CCHHHHHHhCCEEEEEecccccccCCceEE-EeCCHHHH
Confidence 99999999999999995 78774 44554443
No 472
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-38 Score=319.19 Aligned_cols=202 Identities=25% Similarity=0.350 Sum_probs=169.0
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CeeEEEECceecc---------
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~--------- 489 (645)
+++++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~ 82 (249)
T PRK14253 3 KFNIENLDLFYGENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLR 82 (249)
T ss_pred eEEEeccEEEECCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHH
Confidence 58999999999988899999999999999999999999999999999999986 5999999997652
Q ss_pred --cchhccchhhcCCCCCCHHHHHHhhhccc---c----HHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHHHHH
Q 006442 490 --PNYFEQNQAEALDLDKTVLETVAEAAEDW---R----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCKF 557 (645)
Q Consensus 490 --~~~~~q~~~~~l~~~~tv~e~v~~~~~~~---~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~lAra 557 (645)
.+|++|+ ..+.. .|+.+|+....... . ...+...++.+++.. +..++++.+|||||||||+||||
T Consensus 83 ~~i~~~~q~--~~~~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lara 159 (249)
T PRK14253 83 IKVGMVFQK--PNPFP-MSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIART 159 (249)
T ss_pred hheeEEecC--CCcCc-ccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHHHH
Confidence 1244443 23443 79999997643211 1 123556777777642 34678899999999999999999
Q ss_pred HccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 558 MVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 558 l~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|+.+|+||||||||++||+.++..+.++|++. +.|||+||||++++..+|||+++|++|++.. .++.+++.
T Consensus 160 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 232 (249)
T PRK14253 160 IAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVE-HDDTQVIF 232 (249)
T ss_pred HHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999876 3599999999999999999999999999985 46666554
No 473
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3e-38 Score=317.15 Aligned_cols=200 Identities=27% Similarity=0.406 Sum_probs=157.1
Q ss_pred EEEEeEEEEeCC--eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEE
Q 006442 98 VKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (645)
Q Consensus 98 i~i~nls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~ 165 (645)
|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.. ..++|
T Consensus 3 l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (221)
T cd03244 3 IEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRISI 82 (221)
T ss_pred EEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEEE
Confidence 899999999974 469999999999999999999999999999999999999999999988642 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.++ ..|++||+.. +.. .. .+++...++ . . .+...+..+ .
T Consensus 83 ~~q~~~l~-~~tv~enl~~-~~~-~~----~~~~~~~~~--------------~----------~---~l~~~~~~l--~ 126 (221)
T cd03244 83 IPQDPVLF-SGTIRSNLDP-FGE-YS----DEELWQALE--------------R----------V---GLKEFVESL--P 126 (221)
T ss_pred ECCCCccc-cchHHHHhCc-CCC-CC----HHHHHHHHH--------------H----------h---CcHHHHHhc--c
Confidence 99999864 4699999842 100 00 000000000 0 0 111112222 1
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhc
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~ 323 (645)
.|+.. ..++.+.+||||||||++|||||+.+|++|||||||++||+.+++++.++|++ .+.|||++||+++++.. |
T Consensus 127 ~~l~~-~~~~~~~~LS~G~~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~ 204 (221)
T cd03244 127 GGLDT-VVEEGGENLSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIID-S 204 (221)
T ss_pred ccccc-ccccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhh-C
Confidence 23332 34567899999999999999999999999999999999999999999998854 46899999999999976 9
Q ss_pred CeEEEEcCceeE
Q 006442 324 TKIVETEMGVSR 335 (645)
Q Consensus 324 d~i~~l~~G~~~ 335 (645)
|+++++++|++.
T Consensus 205 d~i~~l~~g~~~ 216 (221)
T cd03244 205 DRILVLDKGRVV 216 (221)
T ss_pred CEEEEEECCeEE
Confidence 999999999874
No 474
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.6e-38 Score=325.60 Aligned_cols=209 Identities=22% Similarity=0.367 Sum_probs=158.2
Q ss_pred EEEEeEEEEeC--CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEE
Q 006442 98 VKLENISKSYK--GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (645)
Q Consensus 98 i~i~nls~~y~--~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~ 165 (645)
|+++|++++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ ++|+|.++|.+ ..|+|
T Consensus 3 i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~~ 81 (275)
T cd03289 3 MTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFGV 81 (275)
T ss_pred EEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEEE
Confidence 89999999994 4679999999999999999999999999999999999998 78999998743 25999
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.+++ .|+++|+.. +.. .. .+++.+.++. + .+...+......
T Consensus 82 v~q~~~lf~-~tv~~nl~~-~~~-~~----~~~~~~~l~~------------------------~---gL~~~~~~~p~~ 127 (275)
T cd03289 82 IPQKVFIFS-GTFRKNLDP-YGK-WS----DEEIWKVAEE------------------------V---GLKSVIEQFPGQ 127 (275)
T ss_pred ECCCcccch-hhHHHHhhh-ccC-CC----HHHHHHHHHH------------------------c---CCHHHHHhCccc
Confidence 999998864 699999841 110 00 0011111110 0 011111111111
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhc
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~ 323 (645)
++. ...+ ....||||||||++|||||+.+|+||||||||++||+.+...+.+.|++ .++|||+|||+++++.. |
T Consensus 128 l~~--~~~~-~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~-~ 203 (275)
T cd03289 128 LDF--VLVD-GGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLE-C 203 (275)
T ss_pred ccc--eecC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHh-C
Confidence 111 1111 2456999999999999999999999999999999999999999988863 47999999999999976 9
Q ss_pred CeEEEEcCceeEEeccChHHHHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQYVL 346 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~~~~ 346 (645)
|+|++|++|++. +.|...+.+.
T Consensus 204 dri~vl~~G~i~-~~g~~~~l~~ 225 (275)
T cd03289 204 QRFLVIEENKVR-QYDSIQKLLN 225 (275)
T ss_pred CEEEEecCCeEe-ecCCHHHHhh
Confidence 999999999984 5566555443
No 475
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-38 Score=321.56 Aligned_cols=203 Identities=25% Similarity=0.373 Sum_probs=169.5
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCC-----eeEEEECceecc---------
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPR-----GGEVLLGEHNVL--------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~-----~G~i~~~g~~~~--------- 489 (645)
+|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 7 ~l~~~nl~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~ 86 (261)
T PRK14258 7 AIKVNNLSFYYDTQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRL 86 (261)
T ss_pred eEEEeeEEEEeCCeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHh
Confidence 699999999998878999999999999999999999999999999999999985 899999997652
Q ss_pred ---cchhccchhhcCCCCCCHHHHHHhhhcc------cc-HHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHHHH
Q 006442 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED------WR-IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAFCK 556 (645)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~v~~~~~~------~~-~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~lAr 556 (645)
.+|++|+ ..+.. .|+.+|+...... .. ...+..+++.+++.. +..++++.+||||||||++|||
T Consensus 87 ~~~i~~~~q~--~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~lar 163 (261)
T PRK14258 87 RRQVSMVHPK--PNLFP-MSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQQQRLCIAR 163 (261)
T ss_pred hccEEEEecC--CccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHH
Confidence 1123333 23444 8999999754211 11 234667888888732 3568889999999999999999
Q ss_pred HHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeC-----CeEEeeCCChhH
Q 006442 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKG-----SNLQDYAGDYNQ 627 (645)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~-----g~i~~~~~~~~~ 627 (645)
||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||||++|++ |+++. .++.++
T Consensus 164 al~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~-~~~~~~ 242 (261)
T PRK14258 164 ALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVE-FGLTKK 242 (261)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEE-eCCHHH
Confidence 999999999999999999999999999998763 56999999999999999999999999 99985 467666
Q ss_pred HHH
Q 006442 628 VQS 630 (645)
Q Consensus 628 ~~~ 630 (645)
+.+
T Consensus 243 ~~~ 245 (261)
T PRK14258 243 IFN 245 (261)
T ss_pred HHh
Confidence 543
No 476
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.1e-38 Score=341.60 Aligned_cols=201 Identities=30% Similarity=0.511 Sum_probs=173.1
Q ss_pred cEEEEEeeeeeeCCe-eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cc
Q 006442 423 SVVTIKNLEFGYEDR-LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PN 491 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~-~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~ 491 (645)
..++++|+++.|++. ++++++||++++|+++||+|+||||||||+++|+|+++|++|+|.++|.+.. ..
T Consensus 319 ~ei~~~~l~~~y~~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~ 398 (559)
T COG4988 319 IEISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQIS 398 (559)
T ss_pred ceeeecceEEecCCCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHee
Confidence 345566999999854 8999999999999999999999999999999999999999999999997652 23
Q ss_pred hhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhhcc----------CcCcCCHhHHHHHHHHHHHccC
Q 006442 492 YFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDR----------KVSLLSGGEKARLAFCKFMVKP 561 (645)
Q Consensus 492 ~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~~~----------~~~~LSgGqkqrv~lAral~~~ 561 (645)
|++|+ ...+..|++||+..+....+++++.+++++.++. +..+. ....|||||+|||+||||++++
T Consensus 399 ~v~Q~---p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~-~~v~~p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~ 474 (559)
T COG4988 399 WVSQN---PYLFAGTIRENILLARPDASDEEIIAALDQAGLL-EFVPKPDGLDTVIGEGGAGLSGGQAQRLALARALLSP 474 (559)
T ss_pred eeCCC---CccccccHHHHhhccCCcCCHHHHHHHHHHhcHH-HhhcCCCcccchhccCCCCCCHHHHHHHHHHHHhcCC
Confidence 44544 2446889999999998877888888888888874 33322 2345999999999999999999
Q ss_pred CCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 562 STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 562 p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
++++|+||||+|||.++++.+.+.|.+. .+|||+||||+..+.+ +|+|++|++|++++ .|.+++..
T Consensus 475 ~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~-~D~I~vld~G~l~~-~g~~~~L~ 542 (559)
T COG4988 475 ASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAAD-ADRIVVLDNGRLVE-QGTHEELS 542 (559)
T ss_pred CCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhc-CCEEEEecCCceec-cCCHHHHh
Confidence 9999999999999999999999999876 4699999999999987 99999999999985 67777764
No 477
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.1e-38 Score=368.64 Aligned_cols=212 Identities=24% Similarity=0.404 Sum_probs=168.2
Q ss_pred ccEEEEeEEEEeCC--eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceE
Q 006442 96 SGVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKI 163 (645)
Q Consensus 96 ~~i~i~nls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i 163 (645)
..|+++|++|+|++ +++|+|+||+|++|+.++|+|+||||||||+++|+|+++|++|+|.++|.+ ..|
T Consensus 476 ~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i 555 (710)
T TIGR03796 476 GYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSV 555 (710)
T ss_pred CeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhhe
Confidence 35999999999974 569999999999999999999999999999999999999999999998754 369
Q ss_pred EEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhc
Q 006442 164 AFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLM 243 (645)
Q Consensus 164 ~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll 243 (645)
+||+|++++ ++.|++||+...-.+ .. .+++.++++.+ .+.+.+.++
T Consensus 556 ~~v~Q~~~l-f~gTi~eNi~l~~~~-~~----~~~i~~al~~~---------------------------~l~~~i~~l- 601 (710)
T TIGR03796 556 AMVDQDIFL-FEGTVRDNLTLWDPT-IP----DADLVRACKDA---------------------------AIHDVITSR- 601 (710)
T ss_pred eEEecCChh-hhccHHHHhhCCCCC-CC----HHHHHHHHHHh---------------------------CCHHHHHhC-
Confidence 999999987 578999999632110 00 01122222211 111112221
Q ss_pred hhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhc
Q 006442 244 PELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 244 ~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~ 323 (645)
..|+.+...+ ...+||||||||++|||||+++|+|||||||||+||+.+.+.+.+.|++.++|+|+|||+++.+.. |
T Consensus 602 -p~gl~t~i~e-~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~~~~T~IiitHrl~~i~~-~ 678 (710)
T TIGR03796 602 -PGGYDAELAE-GGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRRRGCTCIIVAHRLSTIRD-C 678 (710)
T ss_pred -cCcccceecc-CCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHhcCCEEEEEecCHHHHHh-C
Confidence 1144443333 368899999999999999999999999999999999999999999998889999999999999876 9
Q ss_pred CeEEEEcCceeEEeccChHHHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~~~ 345 (645)
|+|+++++|++. ..|++++.+
T Consensus 679 D~Iivl~~G~i~-~~G~~~~Ll 699 (710)
T TIGR03796 679 DEIIVLERGKVV-QRGTHEELW 699 (710)
T ss_pred CEEEEEeCCEEE-EecCHHHHH
Confidence 999999999984 567766543
No 478
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-38 Score=319.23 Aligned_cols=206 Identities=25% Similarity=0.385 Sum_probs=159.5
Q ss_pred EEEEeEEEEeC-CeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEEE
Q 006442 98 VKLENISKSYK-GVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (645)
Q Consensus 98 i~i~nls~~y~-~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~v 166 (645)
|+++|++++|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 80 (236)
T cd03253 1 IEFENVTFAYDPGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGVV 80 (236)
T ss_pred CEEEEEEEEeCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEEE
Confidence 47899999996 4679999999999999999999999999999999999999999999998743 249999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhc
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPEL 246 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~l 246 (645)
+|++.++ ..|+.+|+....... .. ..+...+. . . .+.+.+..+
T Consensus 81 ~q~~~~~-~~tv~~nl~~~~~~~-~~----~~~~~~~~------------------------~---~----~l~~~~~~l 123 (236)
T cd03253 81 PQDTVLF-NDTIGYNIRYGRPDA-TD----EEVIEAAK------------------------A---A----QIHDKIMRF 123 (236)
T ss_pred CCCChhh-cchHHHHHhhcCCCC-CH----HHHHHHHH------------------------H---c----CcHHHHHhc
Confidence 9999875 579999985321100 00 00000000 0 0 011122222
Q ss_pred --CCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhh
Q 006442 247 --GFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQL 322 (645)
Q Consensus 247 --gl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~ 322 (645)
|+. ...++.+.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++ .|.|||++||+.+++..
T Consensus 124 ~~~~~-~~~~~~~~~LS~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~- 201 (236)
T cd03253 124 PDGYD-TIVGERGLKLSGGEKQRVAIARAILKNPPILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVN- 201 (236)
T ss_pred ccccc-chhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHh-
Confidence 332 234666899999999999999999999999999999999999999999887743 28899999999999975
Q ss_pred cCeEEEEcCceeEEeccChHH
Q 006442 323 CTKIVETEMGVSRTYEGNYSQ 343 (645)
Q Consensus 323 ~d~i~~l~~G~~~~~~g~~~~ 343 (645)
||+++++++|++. ..|...+
T Consensus 202 ~d~~~~l~~g~i~-~~~~~~~ 221 (236)
T cd03253 202 ADKIIVLKDGRIV-ERGTHEE 221 (236)
T ss_pred CCEEEEEECCEEE-eeCCHHH
Confidence 9999999999874 4555443
No 479
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=3.4e-38 Score=304.75 Aligned_cols=157 Identities=30% Similarity=0.542 Sum_probs=139.8
Q ss_pred EEEEeEEEEeCC--eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEE
Q 006442 98 VKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAF 165 (645)
Q Consensus 98 i~i~nls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~ 165 (645)
|+++|++++|++ .++++++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.. ..++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 478999999975 469999999999999999999999999999999999999999999998642 35899
Q ss_pred EeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh
Q 006442 166 LSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE 245 (645)
Q Consensus 166 v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~ 245 (645)
++|++.+++ .|++||
T Consensus 81 ~~q~~~~~~-~tv~~~---------------------------------------------------------------- 95 (173)
T cd03246 81 LPQDDELFS-GSIAEN---------------------------------------------------------------- 95 (173)
T ss_pred ECCCCcccc-CcHHHH----------------------------------------------------------------
Confidence 999987644 366543
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEecCHHHHHhh
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISHDRAFLDQL 322 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsHd~~~l~~~ 322 (645)
+ ||||||||++|||||+.+|++|||||||++||+.++.++.++|+ +.|.|||++|||++++. .
T Consensus 96 -----------l--LS~G~~qrv~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~-~ 161 (173)
T cd03246 96 -----------I--LSGGQRQRLGLARALYGNPRILVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLA-S 161 (173)
T ss_pred -----------C--cCHHHHHHHHHHHHHhcCCCEEEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHH-h
Confidence 0 89999999999999999999999999999999999999988874 35889999999999985 7
Q ss_pred cCeEEEEcCce
Q 006442 323 CTKIVETEMGV 333 (645)
Q Consensus 323 ~d~i~~l~~G~ 333 (645)
||+++++++|+
T Consensus 162 ~d~v~~l~~G~ 172 (173)
T cd03246 162 ADRILVLEDGR 172 (173)
T ss_pred CCEEEEEECCC
Confidence 99999999885
No 480
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-38 Score=317.41 Aligned_cols=200 Identities=26% Similarity=0.457 Sum_probs=164.1
Q ss_pred EEEEeeeeeeCCe--eceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cch
Q 006442 425 VTIKNLEFGYEDR--LLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (645)
Q Consensus 425 i~~~~v~~~y~~~--~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (645)
|+++|+++.|+++ .+++++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999765 7999999999999999999999999999999999999999999999997652 234
Q ss_pred hccchhhcCCCCCCHHHHHHhhhccccHHH---------HHHHHhhc--CCChhhhccCcCcCCHhHHHHHHHHHHHccC
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDD---------IKGLLGRC--NFKADMLDRKVSLLSGGEKARLAFCKFMVKP 561 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~---------~~~~L~~~--~l~~~~~~~~~~~LSgGqkqrv~lAral~~~ 561 (645)
++|+. .+. ..|+.+|+........... +.+.++.+ ++. ...++++.+||||||||++|||||+.+
T Consensus 81 ~~q~~--~~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~ 156 (234)
T cd03251 81 VSQDV--FLF-NDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYD-TVIGERGVKLSGGQRQRIAIARALLKD 156 (234)
T ss_pred eCCCC--eec-cccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcc-eeeccCCCcCCHHHHHHHHHHHHHhcC
Confidence 44442 333 4799999976532222222 23334444 443 345678899999999999999999999
Q ss_pred CCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 562 STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 562 p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|++|||||||++||+.+++.+.+.|.+. +.|||+||||++++.. ||++++|++|++.. .++.+++..
T Consensus 157 p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~v~~l~~G~i~~-~~~~~~~~~ 225 (234)
T cd03251 157 PPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIEN-ADRIVVLEDGKIVE-RGTHEELLA 225 (234)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-CCEEEEecCCeEee-eCCHHHHHH
Confidence 9999999999999999999999999875 4599999999999976 99999999999985 577776643
No 481
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=3.2e-38 Score=307.48 Aligned_cols=161 Identities=26% Similarity=0.430 Sum_probs=144.7
Q ss_pred cEEEEeEEEEeCCeeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC-----------ceEEE
Q 006442 97 GVKLENISKSYKGVTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN-----------MKIAF 165 (645)
Q Consensus 97 ~i~i~nls~~y~~~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~-----------~~i~~ 165 (645)
+|+++|++++| +|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.+ ..++|
T Consensus 4 ~l~~~~l~~~~----~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (182)
T cd03215 4 VLEVRGLSVKG----AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGIAY 79 (182)
T ss_pred EEEEeccEEEe----eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCeEE
Confidence 59999999999 8999999999999999999999999999999999999999999998632 25999
Q ss_pred EeccC---ccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhh
Q 006442 166 LSQEF---EVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKL 242 (645)
Q Consensus 166 v~Q~~---~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 242 (645)
++|++ .+++..|++||+...
T Consensus 80 ~~q~~~~~~~~~~~t~~e~l~~~--------------------------------------------------------- 102 (182)
T cd03215 80 VPEDRKREGLVLDLSVAENIALS--------------------------------------------------------- 102 (182)
T ss_pred ecCCcccCcccCCCcHHHHHHHH---------------------------------------------------------
Confidence 99985 456678999886310
Q ss_pred chhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHHHH
Q 006442 243 MPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRAFL 319 (645)
Q Consensus 243 l~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~~l 319 (645)
. .||||||||++|||||+.+|++|||||||++||+.+++.+.++|++ .+.|+|++||+++++
T Consensus 103 --------~-------~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~ 167 (182)
T cd03215 103 --------S-------LLSGGNQQKVVLARWLARDPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDEL 167 (182)
T ss_pred --------h-------hcCHHHHHHHHHHHHHccCCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 0 0999999999999999999999999999999999999999887753 479999999999999
Q ss_pred HhhcCeEEEEcCce
Q 006442 320 DQLCTKIVETEMGV 333 (645)
Q Consensus 320 ~~~~d~i~~l~~G~ 333 (645)
.++||+++++++|+
T Consensus 168 ~~~~d~v~~l~~G~ 181 (182)
T cd03215 168 LGLCDRILVMYEGR 181 (182)
T ss_pred HHhCCEEEEecCCc
Confidence 99999999999885
No 482
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-38 Score=308.27 Aligned_cols=205 Identities=25% Similarity=0.406 Sum_probs=181.9
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceec------ccchhccch
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNV------LPNYFEQNQ 497 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~------~~~~~~q~~ 497 (645)
.+++++|+++|+++.+++|+||++++|++.|++|+||+||||.+++|+|+++|++|+|.|+|.++ +++|.+..
T Consensus 2 ~L~ie~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~~~~~rIGyLPEE- 80 (300)
T COG4152 2 ALEIEGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQEIKNRIGYLPEE- 80 (300)
T ss_pred ceEEecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhhhhhhhcccChhh-
Confidence 48999999999999999999999999999999999999999999999999999999999999876 35677643
Q ss_pred hhcCCCCCCHHHHHHhhhcc--c----cHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCC
Q 006442 498 AEALDLDKTVLETVAEAAED--W----RIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPT 571 (645)
Q Consensus 498 ~~~l~~~~tv~e~v~~~~~~--~----~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt 571 (645)
..+.+.+||.|.+.+.+.. . ...++..+|+++++. ....+++.+||-|++|++.+..+++++|+++|||||+
T Consensus 81 -RGLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~-~~~~~kIk~LSKGnqQKIQfisaviHePeLlILDEPF 158 (300)
T COG4152 81 -RGLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIV-GKKTKKIKELSKGNQQKIQFISAVIHEPELLILDEPF 158 (300)
T ss_pred -hccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcccc-ccccchHHHhhhhhhHHHHHHHHHhcCCCEEEecCCc
Confidence 4688999999998875432 1 234577899999995 5678999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHHH
Q 006442 572 NHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSLW 632 (645)
Q Consensus 572 ~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~~ 632 (645)
|||||.+.+.|.+++.++ +.|||++||.|+-++++||+++.|++|+.+. .|+.+...+.+
T Consensus 159 SGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~-~G~v~~ir~~~ 221 (300)
T COG4152 159 SGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTVL-YGTVEDIRRSF 221 (300)
T ss_pred cCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceEE-eccHHHHHHhc
Confidence 999999999999999765 5699999999999999999999999999885 58877765533
No 483
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-37 Score=317.66 Aligned_cols=204 Identities=24% Similarity=0.333 Sum_probs=165.1
Q ss_pred EEEEeEEEEeCC--------------------eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEc
Q 006442 98 VKLENISKSYKG--------------------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKA 157 (645)
Q Consensus 98 i~i~nls~~y~~--------------------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~ 157 (645)
|+++|+++.|.. +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~~ 84 (264)
T PRK13546 5 VNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDRN 84 (264)
T ss_pred EEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEC
Confidence 778888877732 248999999999999999999999999999999999999999999987
Q ss_pred CCCceEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHH
Q 006442 158 KSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDA 237 (645)
Q Consensus 158 ~~~~~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (645)
+ .+++++|.+.+....|+.+|+...... . ..+......
T Consensus 85 g---~~~~~~~~~~~~~~~tv~enl~~~~~~---------------~------------------------~~~~~~~~~ 122 (264)
T PRK13546 85 G---EVSVIAISAGLSGQLTGIENIEFKMLC---------------M------------------------GFKRKEIKA 122 (264)
T ss_pred C---EEeEEecccCCCCCCcHHHHHHHHHHH---------------c------------------------CCCHHHHHH
Confidence 5 367888988777778999997521100 0 000111122
Q ss_pred HHHhhchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHc---cCCCeEEEEec
Q 006442 238 KVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLG---KQDVPMVIISH 314 (645)
Q Consensus 238 ~i~~ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~---~~g~tvIivsH 314 (645)
.+..++..+++. +..++++.+|||||+||++|||||+.+|++|||||||+|||+.+++.+.+.|. +.|+|||++||
T Consensus 123 ~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH 201 (264)
T PRK13546 123 MTPKIIEFSELG-EFIYQPVKKYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSH 201 (264)
T ss_pred HHHHHHHHcCCc-hhhcCCcccCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 334555666765 56778899999999999999999999999999999999999999998888764 45899999999
Q ss_pred CHHHHHhhcCeEEEEcCceeEEeccChHHHH
Q 006442 315 DRAFLDQLCTKIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 315 d~~~l~~~~d~i~~l~~G~~~~~~g~~~~~~ 345 (645)
+++++..+||+|+++++|++. ..|+.+++.
T Consensus 202 ~~~~i~~~~d~i~~l~~G~i~-~~g~~~~~~ 231 (264)
T PRK13546 202 NLGQVRQFCTKIAWIEGGKLK-DYGELDDVL 231 (264)
T ss_pred CHHHHHHHcCEEEEEECCEEE-EeCCHHHHH
Confidence 999999999999999999984 456655543
No 484
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=6.1e-38 Score=308.60 Aligned_cols=170 Identities=29% Similarity=0.387 Sum_probs=151.2
Q ss_pred cEEEEeEEEEeCC------eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCC--CCCccEEEEcCCC-------c
Q 006442 97 GVKLENISKSYKG------VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EPDSGNVIKAKSN-------M 161 (645)
Q Consensus 97 ~i~i~nls~~y~~------~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~--~p~~G~I~~~~~~-------~ 161 (645)
.|+++|++|+|++ .++|+++||+|++|++++|+||||||||||+++|+|++ +|++|+|.++|.. .
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~ 82 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDKRSFRK 82 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCchHhhhh
Confidence 3899999999975 67999999999999999999999999999999999999 9999999998653 3
Q ss_pred eEEEEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHh
Q 006442 162 KIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSK 241 (645)
Q Consensus 162 ~i~~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (645)
.++|++|++.+++..|+.||+.... .
T Consensus 83 ~i~~~~q~~~~~~~~t~~~~i~~~~------------------------------------------------------~ 108 (194)
T cd03213 83 IIGYVPQDDILHPTLTVRETLMFAA------------------------------------------------------K 108 (194)
T ss_pred eEEEccCcccCCCCCcHHHHHHHHH------------------------------------------------------H
Confidence 5999999998877889999874100 0
Q ss_pred hchhcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHH-
Q 006442 242 LMPELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRA- 317 (645)
Q Consensus 242 ll~~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~- 317 (645)
..+||||||||++|||||+.+|++|||||||++||+.+++.+.++|++ .++|||++||+++
T Consensus 109 ---------------~~~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~ 173 (194)
T cd03213 109 ---------------LRGLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSS 173 (194)
T ss_pred ---------------hccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchH
Confidence 017999999999999999999999999999999999999999887743 4899999999996
Q ss_pred HHHhhcCeEEEEcCceeE
Q 006442 318 FLDQLCTKIVETEMGVSR 335 (645)
Q Consensus 318 ~l~~~~d~i~~l~~G~~~ 335 (645)
.+.++||+++++++|++.
T Consensus 174 ~~~~~~d~v~~l~~G~i~ 191 (194)
T cd03213 174 EIFELFDKLLLLSQGRVI 191 (194)
T ss_pred HHHHhcCEEEEEeCCEEE
Confidence 788999999999999874
No 485
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=326.97 Aligned_cols=213 Identities=23% Similarity=0.385 Sum_probs=175.6
Q ss_pred ccCCCCCCCcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCC-----CCeeEEEECceec
Q 006442 414 FPERGRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEK-----PRGGEVLLGEHNV 488 (645)
Q Consensus 414 ~p~~~~~~~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~-----p~~G~i~~~g~~~ 488 (645)
|..+....+.+|+++|++++|+++.+|+++||+|.+||+++|+|+||||||||+++|+|+++ |++|+|.++|.++
T Consensus 35 ~~~~~~~~~~~l~i~nl~~~~~~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i 114 (305)
T PRK14264 35 WTDYEFDGDAKLSVEDLDVYYGDDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDI 114 (305)
T ss_pred ccccccCCCceEEEEEEEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEc
Confidence 33444456778999999999998899999999999999999999999999999999999986 6899999999765
Q ss_pred c------------cchhccchhhcCCCCCCHHHHHHhhhcc-------------------ccHHHHHHHHhhcCCC---h
Q 006442 489 L------------PNYFEQNQAEALDLDKTVLETVAEAAED-------------------WRIDDIKGLLGRCNFK---A 534 (645)
Q Consensus 489 ~------------~~~~~q~~~~~l~~~~tv~e~v~~~~~~-------------------~~~~~~~~~L~~~~l~---~ 534 (645)
. .+|++|+. .+. ..|+.+|+...... .....+..+++.+++. .
T Consensus 115 ~~~~~~~~~~~~~i~~v~q~~--~l~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 191 (305)
T PRK14264 115 YQDGVNLVELRKRVGMVFQSP--NPF-PKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVN 191 (305)
T ss_pred ccccccHHHHhhceEEEccCC--ccc-cccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhh
Confidence 2 13444442 333 35999999864210 0123467788888874 2
Q ss_pred hhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEE-E
Q 006442 535 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRV-V 611 (645)
Q Consensus 535 ~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v-~ 611 (645)
+..++++.+|||||||||+|||||+++|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+||++ +
T Consensus 192 ~~~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~ 271 (305)
T PRK14264 192 DRLDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAV 271 (305)
T ss_pred HHhcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEE
Confidence 3457889999999999999999999999999999999999999999999999876 459999999999999999997 5
Q ss_pred EEeCCeEEeeCCChhHHHH
Q 006442 612 EVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 612 ~l~~g~i~~~~~~~~~~~~ 630 (645)
+|++|+++. .++.+++.+
T Consensus 272 ~l~~G~i~~-~g~~~~~~~ 289 (305)
T PRK14264 272 FLTGGELVE-YDDTDKIFE 289 (305)
T ss_pred EecCCEEEE-eCCHHHHHh
Confidence 679999986 477766643
No 486
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=3.7e-38 Score=312.93 Aligned_cols=183 Identities=34% Similarity=0.483 Sum_probs=157.1
Q ss_pred EEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc--------------cch
Q 006442 427 IKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL--------------PNY 492 (645)
Q Consensus 427 ~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~--------------~~~ 492 (645)
++|+++.|+++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|
T Consensus 1 i~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~ 80 (206)
T TIGR03608 1 LKNISKKFGDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKLGY 80 (206)
T ss_pred CcceEEEECCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCeeE
Confidence 478999998888999999999999999999999999999999999999999999999998742 123
Q ss_pred hccchhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEE
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLV 566 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 566 (645)
+.|. ..+++..|+.+|+...... ...+++.++++.+++ .+..++++.+||||||||++|||||+.+|++||
T Consensus 81 ~~q~--~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-~~~~~~~~~~lS~G~~qr~~laral~~~p~lll 157 (206)
T TIGR03608 81 LFQN--FALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGL-NLKLKQKIYELSGGEQQRVALARAILKDPPLIL 157 (206)
T ss_pred Eecc--hhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCc-hhhhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 3333 3455678999998764321 123457789999999 467789999999999999999999999999999
Q ss_pred eeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEE
Q 006442 567 LDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEV 613 (645)
Q Consensus 567 LDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l 613 (645)
|||||++||+.+++.+.+.|+++ +.|||+||||++++ .+||++++|
T Consensus 158 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~~d~i~~l 206 (206)
T TIGR03608 158 ADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVA-KQADRVIEL 206 (206)
T ss_pred EeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-hhcCEEEeC
Confidence 99999999999999999999865 46999999999977 579999875
No 487
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.9e-38 Score=366.30 Aligned_cols=210 Identities=24% Similarity=0.437 Sum_probs=167.7
Q ss_pred cEEEEeEEEEeCC--eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCCc----------eEE
Q 006442 97 GVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSNM----------KIA 164 (645)
Q Consensus 97 ~i~i~nls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~~----------~i~ 164 (645)
.|+++|++|+|++ +++|+|+||+|++|+++||+|+||||||||+++|+|+++|++|+|.++|.+. .||
T Consensus 451 ~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~ 530 (686)
T TIGR03797 451 AIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLG 530 (686)
T ss_pred eEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccE
Confidence 5999999999953 5699999999999999999999999999999999999999999999998542 599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
||+|++.+ ++.|++||+..+-. .. .+++.++++.+ .+.+.+..+
T Consensus 531 ~v~Q~~~l-f~gTI~eNi~~~~~--~~----~e~i~~al~~a---------------------------~l~~~i~~l-- 574 (686)
T TIGR03797 531 VVLQNGRL-MSGSIFENIAGGAP--LT----LDEAWEAARMA---------------------------GLAEDIRAM-- 574 (686)
T ss_pred EEccCCcc-CcccHHHHHhcCCC--CC----HHHHHHHHHHc---------------------------CcHHHHHhc--
Confidence 99999987 67899999964311 00 01122222211 112222222
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHccCCCeEEEEecCHHHHHhhcC
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFLDQLCT 324 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~~g~tvIivsHd~~~l~~~~d 324 (645)
..|+.+..++ ...+||||||||++|||||+++|+|||||||||+||+.+.+.+.+.|++.++|+|+|||+++.+.. ||
T Consensus 575 p~G~dt~ige-~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~~~T~IiItHr~~~i~~-~D 652 (686)
T TIGR03797 575 PMGMHTVISE-GGGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERLKVTRIVIAHRLSTIRN-AD 652 (686)
T ss_pred cccccccccC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHhCCeEEEEecChHHHHc-CC
Confidence 1244433333 357899999999999999999999999999999999999999999998778999999999999976 99
Q ss_pred eEEEEcCceeEEeccChHHHH
Q 006442 325 KIVETEMGVSRTYEGNYSQYV 345 (645)
Q Consensus 325 ~i~~l~~G~~~~~~g~~~~~~ 345 (645)
+|+++++|++. ..|++++..
T Consensus 653 ~Iivl~~G~iv-~~G~~~~Ll 672 (686)
T TIGR03797 653 RIYVLDAGRVV-QQGTYDELM 672 (686)
T ss_pred EEEEEECCEEE-EECCHHHHH
Confidence 99999999984 567766543
No 488
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4e-38 Score=337.46 Aligned_cols=197 Identities=28% Similarity=0.332 Sum_probs=168.3
Q ss_pred eeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECce----ecc--------------c
Q 006442 429 NLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEH----NVL--------------P 490 (645)
Q Consensus 429 ~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~----~~~--------------~ 490 (645)
++.++|+...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++. .
T Consensus 29 ~~~~~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i 108 (382)
T TIGR03415 29 EILDETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRV 108 (382)
T ss_pred HHHHhhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCE
Confidence 4456777788999999999999999999999999999999999999999999999985 221 2
Q ss_pred chhccchhhcCCCCCCHHHHHHhhhcc------ccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCe
Q 006442 491 NYFEQNQAEALDLDKTVLETVAEAAED------WRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTL 564 (645)
Q Consensus 491 ~~~~q~~~~~l~~~~tv~e~v~~~~~~------~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 564 (645)
+|++|+ ..+++..|+.+|+.+.... .....+.++++.+|+. +..++++.+|||||||||+|||||+.+|+|
T Consensus 109 ~~vfQ~--~~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~-~~~~~~~~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 109 SMVFQK--FALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLA-QWADKKPGELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred EEEECC--CcCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 344443 4567789999999875321 1124577899999995 678999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 565 LVLDEPTNHLDIPSKEMLEEAISEY----KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 565 LlLDEPt~~LD~~s~~~l~~~l~~~----~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
|||||||++||+.++..+++.|.+. +.|||+||||++++.++||||++|++|+++. .|..+++.
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~-~g~~~ei~ 253 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQ-HGTPEEIV 253 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHHh
Confidence 9999999999999999999988754 5699999999999999999999999999986 46666554
No 489
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-38 Score=307.30 Aligned_cols=170 Identities=24% Similarity=0.332 Sum_probs=149.8
Q ss_pred cEEEEeEEEEeCC----eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCC--CCCccEEEEcCCC------ceEE
Q 006442 97 GVKLENISKSYKG----VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQE--EPDSGNVIKAKSN------MKIA 164 (645)
Q Consensus 97 ~i~i~nls~~y~~----~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~--~p~~G~I~~~~~~------~~i~ 164 (645)
.|+++|+++.|++ +++|+++||+|++|++++|+||||||||||+++|+|++ +|++|+|.+++.+ ..++
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~~~~~~~i~ 82 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLDKNFQRSTG 82 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehHHHhhhceE
Confidence 5899999999975 67999999999999999999999999999999999986 4899999998754 3699
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
|++|++.+++..|++||+.... .+
T Consensus 83 ~~~q~~~~~~~~tv~~~l~~~~-------------------------------------------------------~~- 106 (192)
T cd03232 83 YVEQQDVHSPNLTVREALRFSA-------------------------------------------------------LL- 106 (192)
T ss_pred EecccCccccCCcHHHHHHHHH-------------------------------------------------------HH-
Confidence 9999988877889999974110 00
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc---CCCeEEEEecCHH-HHH
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK---QDVPMVIISHDRA-FLD 320 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~---~g~tvIivsHd~~-~l~ 320 (645)
.+||||||||++|||||+.+|++|||||||++||+.++.++.+.|++ .++|||++||+++ .+.
T Consensus 107 -------------~~LSgGe~qrv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~ 173 (192)
T cd03232 107 -------------RGLSVEQRKRLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIF 173 (192)
T ss_pred -------------hcCCHHHhHHHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHH
Confidence 08999999999999999999999999999999999999999988753 4899999999998 478
Q ss_pred hhcCeEEEEcC-ceeE
Q 006442 321 QLCTKIVETEM-GVSR 335 (645)
Q Consensus 321 ~~~d~i~~l~~-G~~~ 335 (645)
.+||+++++++ |++.
T Consensus 174 ~~~d~i~~l~~~g~i~ 189 (192)
T cd03232 174 EKFDRLLLLKRGGKTV 189 (192)
T ss_pred hhCCEEEEEcCCCeEE
Confidence 89999999998 8863
No 490
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=319.94 Aligned_cols=202 Identities=24% Similarity=0.311 Sum_probs=169.2
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CeeEEEECceecc---------
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL--------- 489 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~--------- 489 (645)
+|+++|+++.|+++.+|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 7 ~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 86 (259)
T PRK14260 7 AIKVKDLSFYYNTSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRL 86 (259)
T ss_pred eEEEEEEEEEECCeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhh
Confidence 69999999999888899999999999999999999999999999999999985 4899999997652
Q ss_pred ---cchhccchhhcCCCCCCHHHHHHhhhcc------cc-HHHHHHHHhhcCCC---hhhhccCcCcCCHhHHHHHHHHH
Q 006442 490 ---PNYFEQNQAEALDLDKTVLETVAEAAED------WR-IDDIKGLLGRCNFK---ADMLDRKVSLLSGGEKARLAFCK 556 (645)
Q Consensus 490 ---~~~~~q~~~~~l~~~~tv~e~v~~~~~~------~~-~~~~~~~L~~~~l~---~~~~~~~~~~LSgGqkqrv~lAr 556 (645)
.+|++|+ ..++. .|+.+|+...... .. ...+.++++.+++. .+..++.+.+|||||||||+|||
T Consensus 87 ~~~i~~v~q~--~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~lar 163 (259)
T PRK14260 87 RRQIGMVFQR--PNPFP-MSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQQQRLCIAR 163 (259)
T ss_pred hhheEEEecc--cccCC-ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHH
Confidence 1234443 23444 8999999764321 11 23456778888873 24567889999999999999999
Q ss_pred HHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEe-----CCeEEeeCCChhHHH
Q 006442 557 FMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVK-----GSNLQDYAGDYNQVQ 629 (645)
Q Consensus 557 al~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~-----~g~i~~~~~~~~~~~ 629 (645)
||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++.++|||+++|+ +|+++. .|+.+++.
T Consensus 164 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~-~~~~~~~~ 242 (259)
T PRK14260 164 ALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVE-FGVTTQIF 242 (259)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEE-eCCHHHHh
Confidence 999999999999999999999999999999875 3699999999999999999999997 499985 46766654
No 491
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=7.3e-38 Score=311.20 Aligned_cols=183 Identities=25% Similarity=0.388 Sum_probs=153.9
Q ss_pred cEEEEeEEEEeCC--eeeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEE
Q 006442 97 GVKLENISKSYKG--VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIA 164 (645)
Q Consensus 97 ~i~i~nls~~y~~--~~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~ 164 (645)
.|+++|++++|++ .++|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.. ..|+
T Consensus 6 ~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 85 (207)
T cd03369 6 EIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSSLT 85 (207)
T ss_pred eEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhhEE
Confidence 4999999999975 469999999999999999999999999999999999999999999998742 3599
Q ss_pred EEeccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhch
Q 006442 165 FLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMP 244 (645)
Q Consensus 165 ~v~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~ 244 (645)
|++|++.++. .|+++|+... .. .. ...+.+.++
T Consensus 86 ~v~q~~~~~~-~tv~~~l~~~-~~-----------------------------------------~~----~~~~~~~l~ 118 (207)
T cd03369 86 IIPQDPTLFS-GTIRSNLDPF-DE-----------------------------------------YS----DEEIYGALR 118 (207)
T ss_pred EEecCCcccC-ccHHHHhccc-CC-----------------------------------------CC----HHHHHHHhh
Confidence 9999997754 6999997411 00 00 000111121
Q ss_pred hcCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhh
Q 006442 245 ELGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQL 322 (645)
Q Consensus 245 ~lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~ 322 (645)
.++.+.+|||||+||++|||||+.+|++|||||||++||+.+++.+.++|++ .+.|+|++||+.+++..
T Consensus 119 --------~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~- 189 (207)
T cd03369 119 --------VSEGGLNLSQGQRQLLCLARALLKRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIID- 189 (207)
T ss_pred --------ccCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhh-
Confidence 2456899999999999999999999999999999999999999999988854 37899999999999976
Q ss_pred cCeEEEEcCceeE
Q 006442 323 CTKIVETEMGVSR 335 (645)
Q Consensus 323 ~d~i~~l~~G~~~ 335 (645)
||+++++++|++.
T Consensus 190 ~d~v~~l~~g~i~ 202 (207)
T cd03369 190 YDKILVMDAGEVK 202 (207)
T ss_pred CCEEEEEECCEEE
Confidence 9999999999874
No 492
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.8e-38 Score=339.01 Aligned_cols=209 Identities=29% Similarity=0.427 Sum_probs=163.8
Q ss_pred EEEEeEEEEeCCe-eeeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCCCccEEEEcCCC----------ceEEEE
Q 006442 98 VKLENISKSYKGV-TVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEPDSGNVIKAKSN----------MKIAFL 166 (645)
Q Consensus 98 i~i~nls~~y~~~-~vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p~~G~I~~~~~~----------~~i~~v 166 (645)
++.+|+++.|++. ++++|+||++++|+.++|||+||||||||+++|+|+.+|++|+|.++|.+ .+++||
T Consensus 321 i~~~~l~~~y~~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v 400 (559)
T COG4988 321 ISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWV 400 (559)
T ss_pred eeecceEEecCCCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeee
Confidence 5556999999765 89999999999999999999999999999999999999999999999764 259999
Q ss_pred eccCccCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchh-
Q 006442 167 SQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPE- 245 (645)
Q Consensus 167 ~Q~~~~~~~~Tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~- 245 (645)
+|+|.+ +..|++||+..+-... . .+.+.++++ +. -+.+.++.
T Consensus 401 ~Q~p~l-f~gTireNi~l~~~~~-s----~e~i~~al~--------------~a-----------------~l~~~v~~p 443 (559)
T COG4988 401 SQNPYL-FAGTIRENILLARPDA-S----DEEIIAALD--------------QA-----------------GLLEFVPKP 443 (559)
T ss_pred CCCCcc-ccccHHHHhhccCCcC-C----HHHHHHHHH--------------Hh-----------------cHHHhhcCC
Confidence 999987 6789999996432110 0 011111111 11 01111221
Q ss_pred cCCCcccccccCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc--CCCeEEEEecCHHHHHhhc
Q 006442 246 LGFTADDGDRLVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK--QDVPMVIISHDRAFLDQLC 323 (645)
Q Consensus 246 lgl~~~~~~~~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~--~g~tvIivsHd~~~l~~~~ 323 (645)
-|+++..++. ...|||||+|||+|||||+.+++++||||||+|||.++.+.+.+.|.+ +++|||+|||+++.+.+ +
T Consensus 444 ~GLdt~ige~-G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~-~ 521 (559)
T COG4988 444 DGLDTVIGEG-GAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAAD-A 521 (559)
T ss_pred CcccchhccC-CCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhc-C
Confidence 2444333333 678999999999999999999999999999999999999999887743 57999999999999987 8
Q ss_pred CeEEEEcCceeEEeccChHHHHH
Q 006442 324 TKIVETEMGVSRTYEGNYSQYVL 346 (645)
Q Consensus 324 d~i~~l~~G~~~~~~g~~~~~~~ 346 (645)
|+|+++++|++ ...|++++.+.
T Consensus 522 D~I~vld~G~l-~~~g~~~~L~~ 543 (559)
T COG4988 522 DRIVVLDNGRL-VEQGTHEELSE 543 (559)
T ss_pred CEEEEecCCce-eccCCHHHHhh
Confidence 99999999998 45677665443
No 493
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-38 Score=300.11 Aligned_cols=201 Identities=30% Similarity=0.460 Sum_probs=173.6
Q ss_pred EEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceeccc----------chh
Q 006442 424 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLP----------NYF 493 (645)
Q Consensus 424 ~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~----------~~~ 493 (645)
+|+.+|++++..++.+++++||++++||.+||+||||+|||||||.|+|.+.|++|++.++|.++.. ..+
T Consensus 1 mi~a~nls~~~~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raVl 80 (259)
T COG4559 1 MIRAENLSYSLAGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAVL 80 (259)
T ss_pred CeeeeeeEEEeecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhhc
Confidence 5889999999999999999999999999999999999999999999999999999999999987531 234
Q ss_pred ccchhhcCCCCCCHHHHHHhhhccc------cHHH--HHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHcc-----
Q 006442 494 EQNQAEALDLDKTVLETVAEAAEDW------RIDD--IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK----- 560 (645)
Q Consensus 494 ~q~~~~~l~~~~tv~e~v~~~~~~~------~~~~--~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~----- 560 (645)
+|+ ..+.|..||.|-+.++...+ ..+. +..+|.+.++ ..+..+.+..|||||||||.|||+|++
T Consensus 81 pQ~--s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~-~~la~R~y~~LSGGEqQRVqlARvLaQl~~~v 157 (259)
T COG4559 81 PQN--SSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDL-SGLAGRDYRTLSGGEQQRVQLARVLAQLWPPV 157 (259)
T ss_pred ccC--cccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcCh-hhhhccchhhcCchHHHHHHHHHHHHHccCCC
Confidence 444 45667889999998875322 1222 6788999998 477889999999999999999999986
Q ss_pred -CCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHH
Q 006442 561 -PSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQV 628 (645)
Q Consensus 561 -~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~ 628 (645)
++++|+||||||+||+..+....+..+++ +..|+.|-||++.+..|||||++|.+|+++. .|..++.
T Consensus 158 ~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a-~g~p~~v 228 (259)
T COG4559 158 PSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIA-SGSPQDV 228 (259)
T ss_pred CCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEee-cCCHHHh
Confidence 34699999999999999999999999887 4699999999999999999999999999986 5665554
No 494
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.5e-38 Score=367.30 Aligned_cols=204 Identities=24% Similarity=0.414 Sum_probs=175.9
Q ss_pred CcEEEEEeeeeeeCC--eeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------
Q 006442 422 RSVVTIKNLEFGYED--RLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL---------- 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~--~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~---------- 489 (645)
...|+++||+|+|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.
T Consensus 475 ~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~ 554 (710)
T TIGR03796 475 SGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANS 554 (710)
T ss_pred CCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhh
Confidence 346999999999974 57999999999999999999999999999999999999999999999998863
Q ss_pred cchhccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhh----------hccCcCcCCHhHHHHHHHHHHHc
Q 006442 490 PNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADM----------LDRKVSLLSGGEKARLAFCKFMV 559 (645)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~----------~~~~~~~LSgGqkqrv~lAral~ 559 (645)
.+|++|+. ..++.|++||+..+......+++.++++..++.... ......+||||||||++||||++
T Consensus 555 i~~v~Q~~---~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall 631 (710)
T TIGR03796 555 VAMVDQDI---FLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALV 631 (710)
T ss_pred eeEEecCC---hhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHh
Confidence 24555542 346789999998765556677788888887764211 12334579999999999999999
Q ss_pred cCCCeEEeeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 560 KPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 560 ~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
++|++||||||||+||.++++.+.+.|.+.+.|+|+|||+++.+.. ||||++|++|++++ .|+++++.+
T Consensus 632 ~~p~iliLDEptS~LD~~te~~i~~~l~~~~~T~IiitHrl~~i~~-~D~Iivl~~G~i~~-~G~~~~Ll~ 700 (710)
T TIGR03796 632 RNPSILILDEATSALDPETEKIIDDNLRRRGCTCIIVAHRLSTIRD-CDEIIVLERGKVVQ-RGTHEELWA 700 (710)
T ss_pred hCCCEEEEECccccCCHHHHHHHHHHHHhcCCEEEEEecCHHHHHh-CCEEEEEeCCEEEE-ecCHHHHHH
Confidence 9999999999999999999999999999877899999999999976 99999999999985 588888765
No 495
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=6.9e-38 Score=316.50 Aligned_cols=193 Identities=21% Similarity=0.324 Sum_probs=157.4
Q ss_pred eeeeeeEEEECCcEEEEECCCCccHHHHHHHHHcCCCC----CccEEEEcCCC--------ceEEEEeccCc--cCCCCC
Q 006442 112 VLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEEP----DSGNVIKAKSN--------MKIAFLSQEFE--VSMSRT 177 (645)
Q Consensus 112 vL~~vsl~i~~Ge~~~lvG~NGsGKSTLl~~l~G~~~p----~~G~I~~~~~~--------~~i~~v~Q~~~--~~~~~T 177 (645)
+++|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|.+ ..++|++|++. +.+..|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 57899999999999999999999999999999999999 89999998743 36999999985 334579
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhccchhHHHHhHHHHHHHHHHHHHhCChhcHHHHHHhhchhcCCCc--ccccc
Q 006442 178 VREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTA--DDGDR 255 (645)
Q Consensus 178 v~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~lgl~~--~~~~~ 255 (645)
+.+|+...... . ........+++.++++.+|+.. ...++
T Consensus 81 ~~~~~~~~~~~--------------~-------------------------~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 121 (230)
T TIGR02770 81 MGNHAIETLRS--------------L-------------------------GKLSKQARALILEALEAVGLPDPEEVLKK 121 (230)
T ss_pred HHHHHHHHHHH--------------c-------------------------CccHHHHHHHHHHHHHHcCCCchHHHHhC
Confidence 98887421100 0 0000112345667788888862 45788
Q ss_pred cCCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHcc----CCCeEEEEecCHHHHHhhcCeEEEEcC
Q 006442 256 LVASFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLGK----QDVPMVIISHDRAFLDQLCTKIVETEM 331 (645)
Q Consensus 256 ~~~~LSGGqkqRvaLAraL~~~p~iLLLDEPts~LD~~~~~~l~~~L~~----~g~tvIivsHd~~~l~~~~d~i~~l~~ 331 (645)
++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|++ .++|||++||+++++..+||+++++++
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~ 201 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDD 201 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 8999999999999999999999999999999999999999999887743 478999999999999999999999999
Q ss_pred ceeEEeccChHHH
Q 006442 332 GVSRTYEGNYSQY 344 (645)
Q Consensus 332 G~~~~~~g~~~~~ 344 (645)
|++. ..|..+++
T Consensus 202 G~i~-~~~~~~~~ 213 (230)
T TIGR02770 202 GRIV-ERGTVKEI 213 (230)
T ss_pred CEEE-EeCCHHHH
Confidence 9974 44554443
No 496
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=5.2e-38 Score=306.00 Aligned_cols=166 Identities=25% Similarity=0.444 Sum_probs=144.9
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc-----------c
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL-----------P 490 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~-----------~ 490 (645)
+++|+++|++++| +|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .
T Consensus 2 ~~~l~~~~l~~~~----~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 2 EPVLEVRGLSVKG----AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred CcEEEEeccEEEe----eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 3579999999999 899999999999999999999999999999999999999999999997652 1
Q ss_pred chhccchh-hcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHccCCCeEEeeC
Q 006442 491 NYFEQNQA-EALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDE 569 (645)
Q Consensus 491 ~~~~q~~~-~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 569 (645)
+|++|+.. ..+.+..|+.+|+..... ||||||||++||||++.+|++|||||
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~---------------------------LS~G~~qrl~la~al~~~p~llllDE 130 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL---------------------------LSGGNQQKVVLARWLARDPRVLILDE 130 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh---------------------------cCHHHHHHHHHHHHHccCCCEEEECC
Confidence 23344321 235566788888754310 99999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeE
Q 006442 570 PTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNL 618 (645)
Q Consensus 570 Pt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i 618 (645)
||++||+.+++.+.+.|+++ +.|+|++|||++++.++||++++|++|++
T Consensus 131 P~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 131 PTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 99999999999999999865 46999999999999999999999999874
No 497
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-37 Score=318.47 Aligned_cols=204 Identities=24% Similarity=0.337 Sum_probs=169.6
Q ss_pred CcEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC-----CeeEEEECceecc-------
Q 006442 422 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP-----RGGEVLLGEHNVL------- 489 (645)
Q Consensus 422 ~~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p-----~~G~i~~~g~~~~------- 489 (645)
.++|+++|++++|+++.+|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 4 ~~~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 4 EIILSTKNLNLWYGEKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred cceEEEeeeEEEECCeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 3479999999999988999999999999999999999999999999999999763 4899999997752
Q ss_pred -----cchhccchhhcCCCCCCHHHHHHhhhcc---cc----HHHHHHHHhhcCCCh---hhhccCcCcCCHhHHHHHHH
Q 006442 490 -----PNYFEQNQAEALDLDKTVLETVAEAAED---WR----IDDIKGLLGRCNFKA---DMLDRKVSLLSGGEKARLAF 554 (645)
Q Consensus 490 -----~~~~~q~~~~~l~~~~tv~e~v~~~~~~---~~----~~~~~~~L~~~~l~~---~~~~~~~~~LSgGqkqrv~l 554 (645)
.+|++|+ ..+.. .|+.+|+...... .. ...+.++++.+++.. +..++.+.+||||||||++|
T Consensus 84 ~~~~~i~~~~q~--~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~l 160 (253)
T PRK14261 84 ALRRKIGMVFQR--PNPFP-KSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSGGQQQRLCI 160 (253)
T ss_pred hhhceEEEEecC--CccCc-ccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCHHHHHHHHH
Confidence 1234443 23433 5999999764321 11 224567778877632 34678999999999999999
Q ss_pred HHHHccCCCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHH
Q 006442 555 CKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQ 629 (645)
Q Consensus 555 Aral~~~p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~ 629 (645)
||||+.+|++|||||||++||+.+++.+.+.|+++ +.|||++|||++++.++||++++|++|++.. .|+.+++.
T Consensus 161 aral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~ 236 (253)
T PRK14261 161 ARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIE-FDKTTQIF 236 (253)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEE-cCCHHHHH
Confidence 99999999999999999999999999999999876 3699999999999999999999999999985 46666654
No 498
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-38 Score=351.57 Aligned_cols=201 Identities=23% Similarity=0.294 Sum_probs=173.4
Q ss_pred cEEEEEeeeeeeCCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCC--CeeEEEECceecc-----------
Q 006442 423 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKP--RGGEVLLGEHNVL----------- 489 (645)
Q Consensus 423 ~~i~~~~v~~~y~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p--~~G~i~~~g~~~~----------- 489 (645)
++|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.
T Consensus 4 ~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 83 (506)
T PRK13549 4 YLLEMKNITKTFGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAG 83 (506)
T ss_pred ceEEEeeeEEEeCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCC
Confidence 479999999999988899999999999999999999999999999999999986 8999999997652
Q ss_pred cchhccchhhcCCCCCCHHHHHHhhhcc-----cc----HHHHHHHHhhcCCChhhhccCcCcCCHhHHHHHHHHHHHcc
Q 006442 490 PNYFEQNQAEALDLDKTVLETVAEAAED-----WR----IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVK 560 (645)
Q Consensus 490 ~~~~~q~~~~~l~~~~tv~e~v~~~~~~-----~~----~~~~~~~L~~~~l~~~~~~~~~~~LSgGqkqrv~lAral~~ 560 (645)
.+|++|+ ..+.+..|+.+|+...... .. ...+.++++.+++. +..++++.+|||||||||+|||||+.
T Consensus 84 i~~v~q~--~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~ 160 (506)
T PRK13549 84 IAIIHQE--LALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLD-INPATPVGNLGLGQQQLVEIAKALNK 160 (506)
T ss_pred eEEEEec--cccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCC-CCcccchhhCCHHHHHHHHHHHHHhc
Confidence 2355554 3456678999999764311 11 23577899999994 56789999999999999999999999
Q ss_pred CCCeEEeeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhH
Q 006442 561 PSTLLVLDEPTNHLDIPSKEMLEEAISEY---KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQ 627 (645)
Q Consensus 561 ~p~lLlLDEPt~~LD~~s~~~l~~~l~~~---~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~ 627 (645)
+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++.. ++.++
T Consensus 161 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~-~~~~~ 229 (506)
T PRK13549 161 QARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGT-RPAAG 229 (506)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeee-ccccc
Confidence 99999999999999999999999999765 46999999999999999999999999999753 44443
No 499
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.5e-38 Score=359.25 Aligned_cols=202 Identities=24% Similarity=0.395 Sum_probs=172.8
Q ss_pred EEEEEeeeeee-CCeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cch
Q 006442 424 VVTIKNLEFGY-EDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (645)
Q Consensus 424 ~i~~~~v~~~y-~~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (645)
-|+++||++.| +++++|+|+||+|++|+++||+|+||||||||+++|+|++ |++|+|.++|.++. .+|
T Consensus 349 ~i~~~~vsf~~~~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~ 427 (588)
T PRK11174 349 TIEAEDLEILSPDGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSW 427 (588)
T ss_pred eEEEEeeEEeccCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEE
Confidence 49999999765 5678999999999999999999999999999999999999 99999999998763 245
Q ss_pred hccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChh----------hhccCcCcCCHhHHHHHHHHHHHccCC
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKAD----------MLDRKVSLLSGGEKARLAFCKFMVKPS 562 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~----------~~~~~~~~LSgGqkqrv~lAral~~~p 562 (645)
++|+. ..++.|++||+..+.+..+.+++.++++.+++... .......+||||||||++||||++++|
T Consensus 428 v~Q~~---~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~ 504 (588)
T PRK11174 428 VGQNP---QLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPC 504 (588)
T ss_pred ecCCC---cCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHHhcCC
Confidence 56542 34688999999988666677788888887776321 122334579999999999999999999
Q ss_pred CeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHHH
Q 006442 563 TLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQSL 631 (645)
Q Consensus 563 ~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~~ 631 (645)
+|||||||||+||.++.+.+.+.|.+. +.|+|+|||+++.+.. ||+|++|++|++++ .|+++++.+.
T Consensus 505 ~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~-aD~Iivl~~G~i~e-~G~~~eL~~~ 573 (588)
T PRK11174 505 QLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQ-WDQIWVMQDGQIVQ-QGDYAELSQA 573 (588)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHh-CCEEEEEeCCeEee-cCCHHHHHhc
Confidence 999999999999999999999999876 4699999999999876 99999999999985 6888887643
No 500
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.1e-37 Score=322.02 Aligned_cols=198 Identities=20% Similarity=0.363 Sum_probs=168.2
Q ss_pred EEEEeeeeeeC--CeeceeeeeEEEecCcEEEEEcCCCCcHHHHHHHHHcCCCCCeeEEEECceecc----------cch
Q 006442 425 VTIKNLEFGYE--DRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVL----------PNY 492 (645)
Q Consensus 425 i~~~~v~~~y~--~~~~l~~vsl~i~~Ge~v~i~G~NGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~----------~~~ 492 (645)
|+++|++++|+ .+.+|+++||+|++||+++|+|+||||||||+++|+|+++ .+|+|.++|.++. .+|
T Consensus 3 i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~~ 81 (275)
T cd03289 3 MTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFGV 81 (275)
T ss_pred EEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEEE
Confidence 88999999994 4679999999999999999999999999999999999998 7899999998752 234
Q ss_pred hccchhhcCCCCCCHHHHHHhhhccccHHHHHHHHhhcCCChhhhccCcCc-----------CCHhHHHHHHHHHHHccC
Q 006442 493 FEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSL-----------LSGGEKARLAFCKFMVKP 561 (645)
Q Consensus 493 ~~q~~~~~l~~~~tv~e~v~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~-----------LSgGqkqrv~lAral~~~ 561 (645)
++|+ +.++ ..|+.+|+.... .+..+++.+.++.+|+. +..++.+.. ||||||||++|||||+.+
T Consensus 82 v~q~--~~lf-~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~-~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~ 156 (275)
T cd03289 82 IPQK--VFIF-SGTFRKNLDPYG-KWSDEEIWKVAEEVGLK-SVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSK 156 (275)
T ss_pred ECCC--cccc-hhhHHHHhhhcc-CCCHHHHHHHHHHcCCH-HHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 5554 3343 469999995322 24556788899999994 556777765 999999999999999999
Q ss_pred CCeEEeeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhCCEEEEEeCCeEEeeCCChhHHHH
Q 006442 562 STLLVLDEPTNHLDIPSKEMLEEAISEY--KGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNQVQS 630 (645)
Q Consensus 562 p~lLlLDEPt~~LD~~s~~~l~~~l~~~--~~tvi~vsHd~~~i~~~~d~v~~l~~g~i~~~~~~~~~~~~ 630 (645)
|+||||||||++||+.++..+++.|++. +.|||+||||++++.. ||||++|++|+++++ |..+++.+
T Consensus 157 p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~-~dri~vl~~G~i~~~-g~~~~l~~ 225 (275)
T cd03289 157 AKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLE-CQRFLVIEENKVRQY-DSIQKLLN 225 (275)
T ss_pred CCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHh-CCEEEEecCCeEeec-CCHHHHhh
Confidence 9999999999999999999999999864 4599999999999976 999999999999865 66655543
Done!