BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006446
(644 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 180/299 (60%), Gaps = 9/299 (3%)
Query: 307 KKFRLKELKKATGNFNPKNKLGKGGFGTVYKG-IWRNKEIAVKRVSETSRQGKQ-EFIAE 364
K+F L+EL+ A+ NF+ KN LG+GGFG VYKG + +AVKR+ E QG + +F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKR 424
V I HRNL++L G+C + LLVY YM NGS+ + + P L+W KR
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP----LDWPKR 141
Query: 425 LSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHS 484
+ G+++ L YLH+ + +++HRD+K++NI+LD EF A +GDFGLA+ + + K H
Sbjct: 142 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDXHV 199
Query: 485 TKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSE-QNSYNNSIVHW 543
+ GT G++APE G+++ +TD++ +GV++LE+ G++ + + N + ++ W
Sbjct: 200 XXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 259
Query: 544 LWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEA 602
+ L ++ ++ D L G + ++E+E ++ + L C +P RP M V+++L G+
Sbjct: 260 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 318
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 178/299 (59%), Gaps = 9/299 (3%)
Query: 307 KKFRLKELKKATGNFNPKNKLGKGGFGTVYKG-IWRNKEIAVKRVSETSRQGKQ-EFIAE 364
K+F L+EL+ A+ NF KN LG+GGFG VYKG + +AVKR+ E QG + +F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKR 424
V I HRNL++L G+C + LLVY YM NGS+ + + P L+W KR
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP----LDWPKR 133
Query: 425 LSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHS 484
+ G+++ L YLH+ + +++HRD+K++NI+LD EF A +GDFGLA+ + + K H
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDXHV 191
Query: 485 TKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSE-QNSYNNSIVHW 543
+ G G++APE G+++ +TD++ +GV++LE+ G++ + + N + ++ W
Sbjct: 192 XXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251
Query: 544 LWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEA 602
+ L ++ ++ D L G + ++E+E ++ + L C +P RP M V+++L G+
Sbjct: 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 163/286 (56%), Gaps = 10/286 (3%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRN-KEIAVKRVSETSRQGKQEFIAEVTTIG 369
L +L++AT NF+ K +G G FG VYKG+ R+ ++A+KR + S QG +EF E+ T+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIH 429
RH +LV LIG+C ER++ +L+Y+YM NG+L + ++ S ++++WE+RL +
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY----GSDLPTMSMSWEQRLEICI 146
Query: 430 GTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA 489
G ++ L YLH + ++HRD+KS NI+LD F ++ DFG+++ E L H +
Sbjct: 147 GAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTE-LDQTHLXXVVK 202
Query: 490 GTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRR 549
GT GY+ PE F+ GR T ++D+Y+FGV++ EV C R QS N + W E
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN-LAEWAVESHN 261
Query: 550 KGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVL 595
G++ D L + + + + C + RPSM VL
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 163/286 (56%), Gaps = 10/286 (3%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRN-KEIAVKRVSETSRQGKQEFIAEVTTIG 369
L +L++AT NF+ K +G G FG VYKG+ R+ ++A+KR + S QG +EF E+ T+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIH 429
RH +LV LIG+C ER++ +L+Y+YM NG+L + ++ S ++++WE+RL +
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY----GSDLPTMSMSWEQRLEICI 146
Query: 430 GTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA 489
G ++ L YLH + ++HRD+KS NI+LD F ++ DFG+++ E L H +
Sbjct: 147 GAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTE-LGQTHLXXVVK 202
Query: 490 GTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRR 549
GT GY+ PE F+ GR T ++D+Y+FGV++ EV C R QS N + W E
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN-LAEWAVESHN 261
Query: 550 KGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVL 595
G++ D L + + + + C + RPSM VL
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 160/300 (53%), Gaps = 23/300 (7%)
Query: 309 FRLKELKKATGNFNPK------NKLGKGGFGTVYKGIWRNKEIAVKRVSE----TSRQGK 358
F ELK T NF+ + NK+G+GGFG VYKG N +AVK+++ T+ + K
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT 418
Q+F E+ + +H NLV+L+G+ + D LVY YMPNGSL D + G
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL-----LDRLSCLDGTPP 129
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
L+W R + G + +++LH E +HRDIKS+NI+LD F A++ DFGLAR ++
Sbjct: 130 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNN 538
+T ++ I GT YMAPE+ L G T ++DIY+FGV++LE+ G ++ +
Sbjct: 187 AQTVMXSR-IVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-- 242
Query: 539 SIVHWLWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ + I D D ++ + +E + + C H + RP +K V Q+L
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 159/300 (53%), Gaps = 23/300 (7%)
Query: 309 FRLKELKKATGNFNPK------NKLGKGGFGTVYKGIWRNKEIAVKRVSE----TSRQGK 358
F ELK T NF+ + NK+G+GGFG VYKG N +AVK+++ T+ + K
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT 418
Q+F E+ + +H NLV+L+G+ + D LVY YMPNGSL D + G
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL-----LDRLSCLDGTPP 129
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
L+W R + G + +++LH E +HRDIKS+NI+LD F A++ DFGLAR ++
Sbjct: 130 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNN 538
+T + I GT YMAPE+ L G T ++DIY+FGV++LE+ G ++ +
Sbjct: 187 AQTVMXXR-IVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-- 242
Query: 539 SIVHWLWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ + I D D ++ + +E + + C H + RP +K V Q+L
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 155/300 (51%), Gaps = 23/300 (7%)
Query: 309 FRLKELKKATGNFNPK------NKLGKGGFGTVYKGIWRNKEIAVKRVSE----TSRQGK 358
F ELK T NF+ + NK+G+GGFG VYKG N +AVK+++ T+ + K
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT 418
Q+F E+ + +H NLV+L+G+ + D LVY YMPNGSL D + G
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL-----LDRLSCLDGTPP 123
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
L+W R + G + +++LH E +HRDIKS+NI+LD F A++ DFGLAR E
Sbjct: 124 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARA-SEK 179
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNN 538
I GT YMAPE+ L G T ++DIY+FGV++LE+ G ++ +
Sbjct: 180 FAQXVMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-- 236
Query: 539 SIVHWLWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ + I D D ++ + +E + + C H + RP +K V Q+L
Sbjct: 237 LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 149/300 (49%), Gaps = 23/300 (7%)
Query: 309 FRLKELKKATGNFNPK------NKLGKGGFGTVYKGIWRNKEIAVKRVSE----TSRQGK 358
F ELK T NF+ + NK G+GGFG VYKG N +AVK+++ T+ + K
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT 418
Q+F E+ +H NLV+L+G+ + D LVY Y PNGSL D + G
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL-----LDRLSCLDGTPP 120
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
L+W R + G + +++LH E +HRDIKS+NI+LD F A++ DFGLAR E
Sbjct: 121 LSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARA-SEK 176
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNN 538
I GT Y APE+ L G T ++DIY+FGV++LE+ G ++ +
Sbjct: 177 FAQXVXXSRIVGTTAYXAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-- 233
Query: 539 SIVHWLWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ + I D D + + +E + C H + RP +K V Q+L
Sbjct: 234 LLDIKEEIEDEEKTIEDYIDKKX-NDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 148/302 (49%), Gaps = 43/302 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQ--EFIAEVTTIGSLRHRNLV 377
+ N K K+G G FGTV++ W ++AVK + E ++ EF+ EV + LRH N+V
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+G + + +V EY+ GSL + + SG E L+ +RLS+ + ++ ++Y
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLH----KSGARE-QLDERRRLSMAYDVAKGMNY 152
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LHN + ++HR++KS N+++D ++ ++ DFGL+R T S+K AGTP +MAP
Sbjct: 153 LHNRNPP-IVHRNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAP 208
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKP-GNQSEQNSYNNSIVHWLWELRRKGRILDA 556
E + ++D+Y+FGV++ E+A ++P GN L+
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQPWGN------------------------LNP 244
Query: 557 ADSRLGGEFSEKEMEC-------VLILGLACCHPNPHLRPSMKTVLQVLSGEADPPVLPP 609
A F K +E V + C P RPS T++ +L V PP
Sbjct: 245 AQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304
Query: 610 ER 611
R
Sbjct: 305 NR 306
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 43/302 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQ--EFIAEVTTIGSLRHRNLV 377
+ N K K+G G FGTV++ W ++AVK + E ++ EF+ EV + LRH N+V
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+G + + +V EY+ GSL + + SG E L+ +RLS+ + ++ ++Y
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLH----KSGARE-QLDERRRLSMAYDVAKGMNY 152
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LHN + ++HRD+KS N+++D ++ ++ DFGL+R +K AGTP +MAP
Sbjct: 153 LHNRNPP-IVHRDLKSPNLLVDKKYTVKVCDFGLSRL---KASXFLXSKXAAGTPEWMAP 208
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKP-GNQSEQNSYNNSIVHWLWELRRKGRILDA 556
E + ++D+Y+FGV++ E+A ++P GN L+
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQPWGN------------------------LNP 244
Query: 557 ADSRLGGEFSEKEMEC-------VLILGLACCHPNPHLRPSMKTVLQVLSGEADPPVLPP 609
A F K +E V + C P RPS T++ +L V PP
Sbjct: 245 AQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304
Query: 610 ER 611
R
Sbjct: 305 NR 306
>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|B Chain B, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|C Chain C, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|D Chain D, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
Length = 233
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 125/234 (53%), Gaps = 20/234 (8%)
Query: 27 LHFNFQSFTEQNRNELSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWRDNK 85
++FNFQ F E N L D S + +++T + G P GRA Y Q+W +
Sbjct: 4 IYFNFQRFNETNL-ILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTT 62
Query: 86 NVKATFSTTFVLNI-LNQTAQPGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGTNQSQI 144
A+F+T+F NI + A P +GLAF + P++ +G +LG+ +G +
Sbjct: 63 GTVASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKD-KGGFLGLFDG---SNSNFHT 118
Query: 145 VAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQNITVF 204
VA+EFDT + + D + H+G+DVN SIR + TR + NG + +V + YD + +
Sbjct: 119 VAVEFDTLYNKDWDPTERHIGIDVN---SIRSIKTTRWDFVNGENAEVLITYD-SSTNLL 174
Query: 205 VANMETP------LLSEPIDLSEYLPEKVFVGFSASTG---DDTQLNCVKSWAF 249
VA++ P ++S+ +DL LPE V VGFSA+TG + + N V SW+F
Sbjct: 175 VASLVYPSQKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSF 228
>pdb|1FAT|A Chain A, Phytohemagglutinin-L
pdb|1FAT|B Chain B, Phytohemagglutinin-L
pdb|1FAT|C Chain C, Phytohemagglutinin-L
pdb|1FAT|D Chain D, Phytohemagglutinin-L
Length = 252
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 125/234 (53%), Gaps = 20/234 (8%)
Query: 27 LHFNFQSFTEQNRNELSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWRDNK 85
++FNFQ F E N L D S + +++T + G P GRA Y Q+W +
Sbjct: 4 IYFNFQRFNETNL-ILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTT 62
Query: 86 NVKATFSTTFVLNI-LNQTAQPGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGTNQSQI 144
A+F+T+F NI + A P +GLAF + P++ +G +LG+ +G +
Sbjct: 63 GTVASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKD-KGGFLGLFDG---SNSNFHT 118
Query: 145 VAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQNITVF 204
VA+EFDT + + D + H+G+DVN SIR + TR + NG + +V + YD + +
Sbjct: 119 VAVEFDTLYNKDWDPTERHIGIDVN---SIRSIKTTRWDFVNGENAEVLITYD-SSTNLL 174
Query: 205 VANMETP------LLSEPIDLSEYLPEKVFVGFSASTG---DDTQLNCVKSWAF 249
VA++ P ++S+ +DL LPE V VGFSA+TG + + N V SW+F
Sbjct: 175 VASLVYPSQKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSF 228
>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|B Chain B, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|C Chain C, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|D Chain D, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJQ|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UK9|A Chain A, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|B Chain B, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|C Chain C, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|D Chain D, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|E Chain E, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|F Chain F, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|G Chain G, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|H Chain H, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UL2|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
Length = 281
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 135/255 (52%), Gaps = 21/255 (8%)
Query: 6 MAKFLILAILMGSAAHIQVSSLHFNFQSFTEQNRNELSFDNSTVAKSAIQVTYDVR-GAP 64
M + ++ IL+ AA + + F F+ F E N + ++TV+ +++T G P
Sbjct: 8 MKRIVLFLILLTKAASANL--ISFTFKKFNETNL--ILQRDATVSSGKLRITKAAENGVP 63
Query: 65 ITNQSGRAIYKDQFQLWRDNKNVKATFSTTFVLNI-LNQTAQPGEGLAFVIAGNKDLPEN 123
GRA Y Q+W + A+++T+F N+ A P +GLAF + P++
Sbjct: 64 TAGSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQAPNAASPADGLAFALVPVGSQPKD 123
Query: 124 SEGQWLGIVNGITNGTNQSQIVAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVN 183
+G +LG+ + N + +Q VA+EFDT + D + H+G+DVNS+ SI+ T +
Sbjct: 124 -KGGFLGLFDS-KNYASSNQTVAVEFDTFYNGGWDPTERHIGIDVNSIKSIKT---TSWD 178
Query: 184 LANGTDIKVQVRYDGQNITVFVANMETP------LLSEPIDLSEYLPEKVFVGFSASTGD 237
ANG + +V + YD + + VA++ P ++SE +DL+ LPE V VGFSA+TG
Sbjct: 179 FANGENAEVLITYD-SSTNLLVASLVHPSQKTSFIVSERVDLTSVLPEWVSVGFSATTGL 237
Query: 238 D---TQLNCVKSWAF 249
+ N V SW+F
Sbjct: 238 SKGYVETNEVLSWSF 252
>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form
pdb|1WBF|B Chain B, Winged Bean Lectin, Saccharide Free Form
pdb|2D3S|A Chain A, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|B Chain B, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|C Chain C, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|D Chain D, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
Length = 242
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 121/246 (49%), Gaps = 28/246 (11%)
Query: 24 VSSLHFNFQSFTEQNRNELSF--DNSTVAKSAIQVTYDVRGAPITNQSGRAIYKDQFQLW 81
+ ++ FNF F QN +L D + S +++T V G P N +GRA+Y Q+W
Sbjct: 1 MKTISFNFNQF-HQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVW 59
Query: 82 RDNKNVKATFSTTFVLNILN--QTAQPGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGT 139
A+F T F +I P +GL F IA P N++ G GI N
Sbjct: 60 DSTTGNVASFETRFSFSIRQPFPRPHPADGLVFFIA-----PPNTQTGEGGGYFGIYNPL 114
Query: 140 NQSQIVAIEFDT-KKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDG 198
+ VA+EFDT + +++ I H+G+DVNSV S + VP T L NG V ++YD
Sbjct: 115 SPYPFVAVEFDTFRNTWDPQI--PHIGIDVNSVISTKTVPFT---LDNGGIANVVIKYDA 169
Query: 199 QN-----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDD-------TQLNCVKS 246
+ VF + +++ +DL + LPE V VGFSA+TGD T+ + + S
Sbjct: 170 STKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILS 229
Query: 247 WAFDGS 252
W+F S
Sbjct: 230 WSFSAS 235
>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7T|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
Length = 237
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 120/244 (49%), Gaps = 28/244 (11%)
Query: 26 SLHFNFQSFTEQNRNELSF--DNSTVAKSAIQVTYDVRGAPITNQSGRAIYKDQFQLWRD 83
++ FNF F QN +L D + S +++T V G P N +GRA+Y Q+W
Sbjct: 2 TISFNFNQF-HQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDS 60
Query: 84 NKNVKATFSTTFVLNILN--QTAQPGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGTNQ 141
A+F T F +I P +GL F IA P N++ G GI N +
Sbjct: 61 TTGNVASFETRFSFSIRQPFPRPHPADGLVFFIA-----PPNTQTGEGGGYFGIYNPLSP 115
Query: 142 SQIVAIEFDT-KKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQN 200
VA+EFDT + +++ I H+G+DVNSV S + VP T L NG V ++YD
Sbjct: 116 YPFVAVEFDTFRNTWDPQI--PHIGIDVNSVISTKTVPFT---LDNGGIANVVIKYDAST 170
Query: 201 -----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDD-------TQLNCVKSWA 248
+ VF + +++ +DL + LPE V VGFSA+TGD T+ + + SW+
Sbjct: 171 KILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWS 230
Query: 249 FDGS 252
F S
Sbjct: 231 FSAS 234
>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|B Chain B, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|C Chain C, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|D Chain D, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|2DTW|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTY|A Chain A, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|B Chain B, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|C Chain C, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|D Chain D, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DU0|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU1|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2E51|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E53|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2ZMK|A Chain A, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|B Chain B, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|C Chain C, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|D Chain D, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZML|A Chain A, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|B Chain B, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|C Chain C, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|D Chain D, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZMN|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
Length = 241
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 120/244 (49%), Gaps = 28/244 (11%)
Query: 26 SLHFNFQSFTEQNRNELSF--DNSTVAKSAIQVTYDVRGAPITNQSGRAIYKDQFQLWRD 83
++ FNF F QN +L D + S +++T V G P N +GRA+Y Q+W
Sbjct: 2 TISFNFNQF-HQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDS 60
Query: 84 NKNVKATFSTTFVLNILN--QTAQPGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGTNQ 141
A+F T F +I P +GL F IA P N++ G GI N +
Sbjct: 61 TTGNVASFETRFSFSIRQPFPRPHPADGLVFFIA-----PPNTQTGEGGGYFGIYNPLSP 115
Query: 142 SQIVAIEFDT-KKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQN 200
VA+EFDT + +++ I H+G+DVNSV S + VP T L NG V ++YD
Sbjct: 116 YPFVAVEFDTFRNTWDPQI--PHIGIDVNSVISTKTVPFT---LDNGGIANVVIKYDAST 170
Query: 201 -----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDD-------TQLNCVKSWA 248
+ VF + +++ +DL + LPE V VGFSA+TGD T+ + + SW+
Sbjct: 171 KILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWS 230
Query: 249 FDGS 252
F S
Sbjct: 231 FSAS 234
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYL--RECNRQ----EVNAVVLLYMATQISSAMEYLE-- 129
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 130 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK--WTAPESLA 186
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 231
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 232 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYL--RECNRQ----EVNAVVLLYMATQISSAMEYL--- 132
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK--WTAPESLA 190
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 235
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 236 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271
>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZVX|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZYR|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
pdb|3ZYR|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
Length = 261
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 124/237 (52%), Gaps = 18/237 (7%)
Query: 26 SLHFNFQSFTEQNRNELSF--DNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWR 82
SL F+F +F RN L F D T + +Q+T D GAP+ + GR ++ Q +LW
Sbjct: 11 SLSFSFINFDRDERN-LIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRILHSAQVRLWE 69
Query: 83 DNKNVKATFSTTFVLNILNQTAQPGEGLAFVIA-GNKDLPENSEGQWLGIVNGITNGTNQ 141
+ N A T F + + + P +G+AF IA + +P S G LG+ N T N+
Sbjct: 70 KSTNRVANLQTQFSFFLSSPLSNPADGIAFFIAPPDTTIPSGSAGGLLGLFNPRT-ALNE 128
Query: 142 S--QIVAIEFDT---KKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRY 196
S Q++A+EFDT + S D N H+G+DVN SIR + R G + V V Y
Sbjct: 129 SANQVLAVEFDTFFAQNSNTWDPNYQHIGIDVN---SIRSSKVVRWERREGKTLNVLVTY 185
Query: 197 DGQNITVFVA----NMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
+ T+ V + + LS +DL+ LPE V VGFSA++G+ Q + ++SW+F
Sbjct: 186 NPSTRTIDVVATYPDGQRYQLSHVVDLTTILPEWVRVGFSAASGEQFQTHNLESWSF 242
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYL--RECNRQ----EVNAVVLLYMATQISSAMEYLE-- 133
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLA 190
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 235
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 236 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 18/214 (8%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNL 376
G ++G G FGTVYKG W ++AVK V+ + Q Q F EV + RH N+
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+ +G+ + +V ++ SL + ET K + + T+Q +D
Sbjct: 72 LLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-------FEMIKLIDIARQTAQGMD 123
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YLH K ++HRD+KS+NI L + ++GDFGLA T++ H ++++G+ +MA
Sbjct: 124 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMA 179
Query: 497 PESFLVGRA---TIETDIYAFGVLILEVACGRKP 527
PE + + ++D+YAFG+++ E+ G+ P
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYL--RECNRQ----EVNAVVLLYMATQISSAMEYL--- 132
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLA 190
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 235
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 236 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYL--RECNRQ----EVNAVVLLYMATQISSAMEYL--- 132
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLA 190
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 235
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 236 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 80
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYL--RECNRQ----EVNAVVLLYMATQISSAMEYL--- 131
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 132 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLA 189
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 190 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 234
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 235 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 270
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 18/214 (8%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNL 376
G ++G G FGTVYKG W ++AVK V+ + Q Q F EV + RH N+
Sbjct: 10 GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 68
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+ +G+ + +V ++ SL + ET K + + T+Q +D
Sbjct: 69 LLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-------FEMIKLIDIARQTAQGMD 120
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YLH K ++HRD+KS+NI L + ++GDFGLA T++ H ++++G+ +MA
Sbjct: 121 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMA 176
Query: 497 PESFLVGRA---TIETDIYAFGVLILEVACGRKP 527
PE + + ++D+YAFG+++ E+ G+ P
Sbjct: 177 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 18/214 (8%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNL 376
G ++G G FGTVYKG W ++AVK V+ + Q Q F EV + RH N+
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+ +G+ + +V ++ SL + ET K + + T+Q +D
Sbjct: 67 LLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-------FEMIKLIDIARQTAQGMD 118
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YLH K ++HRD+KS+NI L + ++GDFGLA T++ H ++++G+ +MA
Sbjct: 119 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMA 174
Query: 497 PESFLVGRA---TIETDIYAFGVLILEVACGRKP 527
PE + + ++D+YAFG+++ E+ G+ P
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 133/280 (47%), Gaps = 36/280 (12%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G FG VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 16 KHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N + L + S A++YL
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVV----LLYMATQISSAMEYLEK- 127
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 128 --KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLA 183
Query: 502 VGRATIETDIYAFGVLILEVAC---GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAAD 558
+ +I++D++AFGVL+ E+A PG Q ++EL K D
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ----------VYELLEK-------D 226
Query: 559 SRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
R+ E E E V L AC NP RPS + Q
Sbjct: 227 YRM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 264
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 135/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N + L + S A++YL
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVV----LLYMATQISSAMEYLE-- 133
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLA 190
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 235
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 236 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 18/214 (8%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNL 376
G ++G G FGTVYKG W ++AVK V+ + Q Q F EV + RH N+
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+ +G+ + +V ++ SL + ET K + + T+Q +D
Sbjct: 72 LLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-------FEMIKLIDIARQTAQGMD 123
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YLH K ++HRD+KS+NI L + ++GDFGLA T++ H ++++G+ +MA
Sbjct: 124 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMA 179
Query: 497 PESFLVGRA---TIETDIYAFGVLILEVACGRKP 527
PE + + ++D+YAFG+++ E+ G+ P
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 135/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N + L + S A++YL
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVV----LLYMATQISSAMEYLE-- 128
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLA 185
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 230
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 231 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 18/214 (8%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNL 376
G ++G G FGTVYKG W ++AVK V+ + Q Q F EV + RH N+
Sbjct: 35 GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 93
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+ +G+ + +V ++ SL + ET K + + T+Q +D
Sbjct: 94 LLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-------FEMIKLIDIARQTAQGMD 145
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YLH K ++HRD+KS+NI L + ++GDFGLA T++ H ++++G+ +MA
Sbjct: 146 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMA 201
Query: 497 PESFLVGRA---TIETDIYAFGVLILEVACGRKP 527
PE + + ++D+YAFG+++ E+ G+ P
Sbjct: 202 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 134/280 (47%), Gaps = 36/280 (12%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N + L + S A++YL
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVV----LLYMATQISSAMEYLE-- 126
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK--WTAPESLA 183
Query: 502 VGRATIETDIYAFGVLILEVAC---GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAAD 558
+ +I++D++AFGVL+ E+A PG Q ++EL K D
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ----------VYELLEK-------D 226
Query: 559 SRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
R+ E E E V L AC NP RPS + Q
Sbjct: 227 YRM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 137/279 (49%), Gaps = 34/279 (12%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 31 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 89
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYL--RECNRQ----EVNAVVLLYMATQISSAMEYL--- 140
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESF 500
+K +HRD+ + N ++ ++ DFGL+R + + T H+ A P + APES
Sbjct: 141 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG---AKFPIKWTAPESL 197
Query: 501 LVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADS 559
+ +I++D++AFGVL+ E+A G P Y + ++EL K D
Sbjct: 198 AYNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DY 242
Query: 560 RLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
R+ E E E V L AC NP RPS + Q
Sbjct: 243 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 279
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYL--RECNRQ----EVNAVVLLYMATQISSAMEYL--- 127
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLA 185
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 230
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 231 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYL--RECNRQ----EVNAVVLLYMATQISSAMEYL--- 129
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLA 187
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 232
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 233 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 268
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 18/214 (8%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNL 376
G ++G G FGTVYKG W ++AVK V+ + Q Q F EV + RH N+
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 94
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+ +G+ + +V ++ SL + ET K + + T+Q +D
Sbjct: 95 LLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-------FEMIKLIDIARQTAQGMD 146
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YLH K ++HRD+KS+NI L + ++GDFGLA T++ H ++++G+ +MA
Sbjct: 147 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMA 202
Query: 497 PESFLVGRA---TIETDIYAFGVLILEVACGRKP 527
PE + + ++D+YAFG+++ E+ G+ P
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 135/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N + L + S A++YL
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVV----LLYMATQISSAMEYLE-- 128
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLA 185
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 230
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 231 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 135/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N + L + S A++YL
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVV----LLYMATQISSAMEYLE-- 128
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLA 185
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 230
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 231 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 135/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N + L + S A++YL
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVV----LLYMATQISSAMEYLE-- 128
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLA 185
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 230
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 231 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYL--RECNRQ----EVNAVVLLYMATQISSAMEYL--- 129
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLA 187
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 232
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 233 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 268
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYL--RECNRQ----EVNAVVLLYMATQISSAMEYL--- 127
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLA 185
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 230
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 231 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 113/214 (52%), Gaps = 18/214 (8%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNL 376
G ++G G FGTVYKG W ++AVK V+ + Q Q F EV + RH N+
Sbjct: 12 GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 70
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+ +G+ + +V ++ SL + ET +K + + T++ +D
Sbjct: 71 LLFMGYS-TKPQLAIVTQWCEGSSLYHHLHASETK-------FEMKKLIDIARQTARGMD 122
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YLH K ++HRD+KS+NI L + ++GDFGLA T++ H ++++G+ +MA
Sbjct: 123 YLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMA 178
Query: 497 PESFLVGRA---TIETDIYAFGVLILEVACGRKP 527
PE + + + ++D+YAFG+++ E+ G+ P
Sbjct: 179 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYL--RECN----RQEVNAVVLLYMATQISSAMEYL--- 373
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HR++ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 374 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLA 431
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 432 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 476
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 477 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 512
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 222 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYL--RECN----RQEVNAVVLLYMATQISSAMEYL--- 331
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HR++ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 332 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLA 389
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 390 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 434
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 435 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 470
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 18/214 (8%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNL 376
G ++G G FGTVYKG W ++AVK V+ + Q Q F EV + RH N+
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+ +G+ +V ++ SL + ET K + + T+Q +D
Sbjct: 67 LLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHIIETK-------FEMIKLIDIARQTAQGMD 118
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YLH K ++HRD+KS+NI L + ++GDFGLA T++ H ++++G+ +MA
Sbjct: 119 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMA 174
Query: 497 PESFLVGRA---TIETDIYAFGVLILEVACGRKP 527
PE + + ++D+YAFG+++ E+ G+ P
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 135/278 (48%), Gaps = 32/278 (11%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N + L + S A++YL
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVV----LLYMATQISSAMEYL--- 334
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HR++ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 335 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLA 392
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSR 560
+ +I++D++AFGVL+ E+A G P Y + ++EL K D R
Sbjct: 393 YNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK-------DYR 437
Query: 561 LGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
+ E E E V L AC NP RPS + Q
Sbjct: 438 M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 473
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 110/201 (54%), Gaps = 14/201 (6%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 37 KHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 95
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F +V EYMP G+L ++ E N EVT L + S A++YL
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYL--RECNR--EEVTAV--VLLYMATQISSAMEYL--- 146
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 147 EKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLA 204
Query: 502 VGRATIETDIYAFGVLILEVA 522
+I++D++AFGVL+ E+A
Sbjct: 205 YNTFSIKSDVWAFGVLLWEIA 225
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 133/280 (47%), Gaps = 36/280 (12%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N + L + S A++YL
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVV----LLYMATQISSAMEYLEK- 127
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
K +HRD+ + N ++ ++ DFGL+R + + T H+ + + APES
Sbjct: 128 --KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP--IKWTAPESLA 183
Query: 502 VGRATIETDIYAFGVLILEVAC---GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAAD 558
+ +I++D++AFGVL+ E+A PG Q ++EL K D
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ----------VYELLEK-------D 226
Query: 559 SRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
R+ E E E V L AC NP RPS + Q
Sbjct: 227 YRM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 264
>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia
Milbraedii Seed Agglutinin
Length = 240
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 14/239 (5%)
Query: 26 SLHFNFQSFTEQNRNELSF--DNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWR 82
S+ F F F E + +L F D S + A+Q+T D +G P GRA+Y +LW+
Sbjct: 3 SVCFTFTDF-ESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLWQ 61
Query: 83 DNKNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGIVNGITNGTNQ 141
+ V A+F TTF +I ++ P + L F IA + +P S G+ LG+ N +
Sbjct: 62 SSSLV-ASFETTFTFSISQGSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNNAGSD 120
Query: 142 SQIVAIEFDTKKSYE-QDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQN 200
+ +V++EFDT + + D N H+G+DVNS IR ++ + NG + Y+ +
Sbjct: 121 NGVVSVEFDTYPNTDIGDPNYRHIGIDVNS---IRSKAASKWDWQNGKTATAHISYNSAS 177
Query: 201 ITVFVA----NMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAFDGSDIG 255
+ V N ++S ++L+ P V VGFSA+TG TQ N + +W+F S +G
Sbjct: 178 KRLSVVSSYPNSSPVVVSFDVELNNVXPXWVRVGFSATTGQYTQTNNILAWSFRSSLMG 236
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 18/214 (8%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNL 376
G ++G G FGTVYKG W ++AVK V+ + Q Q F EV + RH N+
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+ +G+ + +V ++ SL + ET K + + T+Q +D
Sbjct: 67 LLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-------FEMIKLIDIARQTAQGMD 118
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YLH K ++HRD+KS+NI L + ++GDFGLA T + H ++++G+ +MA
Sbjct: 119 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TEKSRWSGSHQFEQLSGSILWMA 174
Query: 497 PESFLVGRA---TIETDIYAFGVLILEVACGRKP 527
PE + + ++D+YAFG+++ E+ G+ P
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 18/214 (8%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNL 376
G ++G G FGTVYKG W ++AVK V+ + Q Q F EV + RH N+
Sbjct: 28 GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 86
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+ +G+ + +V ++ SL + ET K + + T+Q +D
Sbjct: 87 LLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-------FEMIKLIDIARQTAQGMD 138
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YLH K ++HRD+KS+NI L + ++GDFGLA T + H ++++G+ +MA
Sbjct: 139 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TEKSRWSGSHQFEQLSGSILWMA 194
Query: 497 PESFLVGRA---TIETDIYAFGVLILEVACGRKP 527
PE + + ++D+YAFG+++ E+ G+ P
Sbjct: 195 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 18/214 (8%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNL 376
G ++G G FGTVYKG W ++AVK V+ + Q Q F EV + RH N+
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 94
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+ +G+ + +V ++ SL + ET K + + T+Q +D
Sbjct: 95 LLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-------FEMIKLIDIARQTAQGMD 146
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YLH K ++HRD+KS+NI L + ++GDFGLA T + H ++++G+ +MA
Sbjct: 147 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TEKSRWSGSHQFEQLSGSILWMA 202
Query: 497 PESFLVGRA---TIETDIYAFGVLILEVACGRKP 527
PE + + ++D+YAFG+++ E+ G+ P
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 18/214 (8%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNL 376
G ++G G FGTVYKG W ++AVK V+ + Q Q F EV + RH N+
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 82
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+ +G+ + +V ++ SL + ET +K + + T++ +D
Sbjct: 83 LLFMGYS-TKPQLAIVTQWCEGSSLYHHLHASETK-------FEMKKLIDIARQTARGMD 134
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YLH K ++HRD+KS+NI L + ++GDFGLA T + H ++++G+ +MA
Sbjct: 135 YLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-TEKSRWSGSHQFEQLSGSILWMA 190
Query: 497 PESFLVGRA---TIETDIYAFGVLILEVACGRKP 527
PE + + + ++D+YAFG+++ E+ G+ P
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 113/214 (52%), Gaps = 24/214 (11%)
Query: 326 KLGKGGFGTVYKGIWRNKE---IAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
+LG G FG VYK +NKE +A +V ET S + +++I E+ + + H +VKL+G
Sbjct: 18 ELGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
Y ++ E+ P G++D + E + G E + V +AL++LH+
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIML--ELDRGLTEPQIQ-----VVCRQMLEALNFLHS- 127
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
KR++HRD+K+ N+++ E + RL DFG++ +NLKT GTP +MAPE +
Sbjct: 128 --KRIIHRDLKAGNVLMTLEGDIRLADFGVS---AKNLKTLQKRDSFIGTPYWMAPEVVM 182
Query: 502 VGRAT-----IETDIYAFGVLILEVACGRKPGNQ 530
+ DI++ G+ ++E+A P ++
Sbjct: 183 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 216
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 113/214 (52%), Gaps = 24/214 (11%)
Query: 326 KLGKGGFGTVYKGIWRNKE---IAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
+LG G FG VYK +NKE +A +V ET S + +++I E+ + + H +VKL+G
Sbjct: 26 ELGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
Y ++ E+ P G++D + E + G E + V +AL++LH+
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIML--ELDRGLTEPQIQ-----VVCRQMLEALNFLHS- 135
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
KR++HRD+K+ N+++ E + RL DFG++ +NLKT GTP +MAPE +
Sbjct: 136 --KRIIHRDLKAGNVLMTLEGDIRLADFGVS---AKNLKTLQKRDSFIGTPYWMAPEVVM 190
Query: 502 VGRAT-----IETDIYAFGVLILEVACGRKPGNQ 530
+ DI++ G+ ++E+A P ++
Sbjct: 191 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 224
>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|B Chain B, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|C Chain C, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|D Chain D, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|E Chain E, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|F Chain F, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1G7Y|A Chain A, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|B Chain B, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|C Chain C, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|D Chain D, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|E Chain E, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|F Chain F, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
Length = 253
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 127/234 (54%), Gaps = 20/234 (8%)
Query: 30 NFQSFTEQNRNELSF---DNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWRDNK 85
+ QSF+ +N N SF ++TV+ S +++T G P + GRA Y Q++ +
Sbjct: 2 DIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKST 61
Query: 86 NVKATFSTTFVLNILN-QTAQPGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGTNQSQI 144
A+++T+F NI + +G+AF + P+++ G +LG+ + N +Q
Sbjct: 62 GAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSG-FLGVFDSDVYD-NSAQT 119
Query: 145 VAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQNITVF 204
VA+EFDT + + D H+G+DVNS+ SIR LANG + ++ + Y+ ++
Sbjct: 120 VAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASW---GLANGQNAEILITYNAAT-SLL 175
Query: 205 VANMETP------LLSEPIDLSEYLPEKVFVGFSASTGDD---TQLNCVKSWAF 249
VA++ P ++SE +D++ LPE V +GFSA+TG T+ + V SW+F
Sbjct: 176 VASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSF 229
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 127/288 (44%), Gaps = 48/288 (16%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRV----SETSRQGKQEFIAEVTTIGSLRHRNLVKLIGW 382
+G GGFG VY+ W E+AVK E Q + E L+H N++ L G
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 383 CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGS 442
C + + LV E+ G L++ + P ++ +NW +++ + ++YLH+ +
Sbjct: 75 CLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIA------RGMNYLHDEA 125
Query: 443 EKRVLHRDIKSSNIMLDSEFN--------ARLGDFGLARTIQENLKTHHSTK-EIAGTPG 493
++HRD+KSSNI++ + ++ DFGLAR + H +TK AG
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRTTKMSAAGAYA 179
Query: 494 YMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWELRRKG 551
+MAPE + +D++++GVL+ E+ G P G +Y
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYG-------------- 225
Query: 552 RILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLS 599
A ++L E L C +P+PH RPS +L L+
Sbjct: 226 ----VAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYL--RECNRQ----EVNAVVLLYMATQISSAMEYLE-- 129
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP---GYMAPE 498
+K +HRD+ + N ++ ++ DFGL+R L T + AG + APE
Sbjct: 130 -KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAPAGAKFPIKWTAPE 183
Query: 499 SFLVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAA 557
S + +I++D++AFGVL+ E+A G P Y + ++EL K
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK------- 228
Query: 558 DSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
D R+ E E E V L AC NP RPS + Q
Sbjct: 229 DYRM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 267
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 18/214 (8%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNL 376
G ++G G FGTVYKG W ++AVK V+ + Q Q F EV + RH N+
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 82
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+ +G+ +V ++ SL + ET +K + + T++ +D
Sbjct: 83 LLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETK-------FEMKKLIDIARQTARGMD 134
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YLH K ++HRD+KS+NI L + ++GDFGLA T + H ++++G+ +MA
Sbjct: 135 YLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-TEKSRWSGSHQFEQLSGSILWMA 190
Query: 497 PESFLVGRA---TIETDIYAFGVLILEVACGRKP 527
PE + + + ++D+YAFG+++ E+ G+ P
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 135/281 (48%), Gaps = 38/281 (13%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
K+KLG G +G VY+G+W+ +AVK + E + + +EF+ E + ++H NLV+L+G
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C F ++ E+M G+L ++ E N +N L + S A++YL
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYL--RECNRQ----EVNAVVLLYMATQISSAMEYL--- 129
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP---GYMAPE 498
+K +HRD+ + N ++ ++ DFGL+R L T + AG + APE
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAPAGAKFPIKWTAPE 184
Query: 499 SFLVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAA 557
S + +I++D++AFGVL+ E+A G P Y + ++EL K
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMSP--------YPGIDLSQVYELLEK------- 229
Query: 558 DSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
D R+ E E E V L AC NP RPS + Q
Sbjct: 230 DYRM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 268
>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|D Chain D, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|F Chain F, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|H Chain H, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 242
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 119/237 (50%), Gaps = 25/237 (10%)
Query: 29 FNFQSFTEQNRNELSFDNSTVAKSA-IQVT-YDVRGAPITNQSGRAIYKDQFQLWRDNKN 86
F F F N ++TV S +Q+T D G P GRA+Y +W
Sbjct: 7 FTFSKFKPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPINIWDSKTG 66
Query: 87 VKATFSTTFVLNILN-QTAQPGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGTNQSQIV 145
V A+F+T+F I A +GLAF +A P+ G +LG+ + ++ Q V
Sbjct: 67 VVASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKAGAG-FLGLFDSAVFNSSY-QTV 124
Query: 146 AIEFDTKKSYEQ----DINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQNI 201
A+EFDT YE D D H+G+DVNS+ SI+ V + +LANG KV + YD +
Sbjct: 125 AVEFDT---YENTVFLDPPDTHIGIDVNSIKSIKTV---KWDLANGEAAKVLITYD-SSA 177
Query: 202 TVFVANMETP------LLSEPIDLSEYLPEKVFVGFSASTGDDT---QLNCVKSWAF 249
+ VA + P +LS+ +DL LPE V +GFSA+TG + + + V SW+F
Sbjct: 178 KLLVAALVYPSSKTSFILSDVVDLKSVLPEWVSIGFSAATGASSGYIETHDVFSWSF 234
>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|C Chain C, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|E Chain E, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|G Chain G, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 256
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 119/237 (50%), Gaps = 25/237 (10%)
Query: 29 FNFQSFTEQNRNELSFDNSTVAKS-AIQVT-YDVRGAPITNQSGRAIYKDQFQLWRDNKN 86
F F F N ++TV S +Q+T D G P GRA+Y +W
Sbjct: 7 FTFSKFKPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPINIWDSKTG 66
Query: 87 VKATFSTTFVLNILN-QTAQPGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGTNQSQIV 145
V A+F+T+F I A +GLAF +A P+ G +LG+ + ++ Q V
Sbjct: 67 VVASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKAGAG-FLGLFDSAVFNSSY-QTV 124
Query: 146 AIEFDTKKSYEQ----DINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQNI 201
A+EFDT YE D D H+G+DVNS+ SI+ V + +LANG KV + YD +
Sbjct: 125 AVEFDT---YENTVFLDPPDTHIGIDVNSIKSIKTV---KWDLANGEAAKVLITYD-SSA 177
Query: 202 TVFVANMETP------LLSEPIDLSEYLPEKVFVGFSASTGDDT---QLNCVKSWAF 249
+ VA + P +LS+ +DL LPE V +GFSA+TG + + + V SW+F
Sbjct: 178 KLLVAALVYPSSKTSFILSDVVDLKSVLPEWVSIGFSAATGASSGYIETHDVFSWSF 234
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 131/274 (47%), Gaps = 31/274 (11%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER 386
+G+G FG V K WR K++A+K++ S ++ FI E+ + + H N+VKL G C
Sbjct: 17 VGRGAFGVVCKAKWRAKDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVKLYGACL-- 72
Query: 387 HDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRV 446
+ LV EY GSL Y+ + +S SQ + YLH+ K +
Sbjct: 73 NPVCLVMEYAEGGSL-----YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 447 LHRDIKSSNIMLDSEFNA-RLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRA 505
+HRD+K N++L + ++ DFG A IQ TH + + G+ +MAPE F
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQ----THMTNNK--GSAAWMAPEVFEGSNY 181
Query: 506 TIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSRLGGEF 565
+ + D++++G+++ EV RKP ++ ++ RI+ A +
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEIGGPAF---------------RIMWAVHNGTRPPL 226
Query: 566 SEKEMECVLILGLACCHPNPHLRPSMKTVLQVLS 599
+ + + L C +P RPSM+ ++++++
Sbjct: 227 IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 260
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 131/274 (47%), Gaps = 31/274 (11%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER 386
+G+G FG V K WR K++A+K++ S ++ FI E+ + + H N+VKL G C
Sbjct: 16 VGRGAFGVVCKAKWRAKDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVKLYGACL-- 71
Query: 387 HDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRV 446
+ LV EY GSL Y+ + +S SQ + YLH+ K +
Sbjct: 72 NPVCLVMEYAEGGSL-----YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 447 LHRDIKSSNIMLDSEFNA-RLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRA 505
+HRD+K N++L + ++ DFG A IQ TH + + G+ +MAPE F
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQ----THMTNNK--GSAAWMAPEVFEGSNY 180
Query: 506 TIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSRLGGEF 565
+ + D++++G+++ EV RKP ++ ++ RI+ A +
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAF---------------RIMWAVHNGTRPPL 225
Query: 566 SEKEMECVLILGLACCHPNPHLRPSMKTVLQVLS 599
+ + + L C +P RPSM+ ++++++
Sbjct: 226 IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 119/230 (51%), Gaps = 23/230 (10%)
Query: 306 PKKFRLKEL------KKATGNFNPKNKLGKGGFGTVYKGIWRN--KEIAVKRVSETSRQG 357
P + +LK+L K+ F+ KLG+G +G+VYK I + + +A+K+V S
Sbjct: 10 PPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--D 67
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
QE I E++ + ++VK G ++ D +V EY GS+ I
Sbjct: 68 LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK------- 120
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
TL ++ +++ T + L+YLH R +HRDIK+ NI+L++E +A+L DFG+A + +
Sbjct: 121 TLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177
Query: 478 NLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ + + GTP +MAPE DI++ G+ +E+A G+ P
Sbjct: 178 XMAKRNX---VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|B Chain B, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|C Chain C, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|D Chain D, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|E Chain E, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|F Chain F, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|G Chain G, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|H Chain H, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1LU2|A Chain A, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU2|B Chain B, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU1|A Chain A, The Structure Of The Dolichos Biflorus Seed Lectin In
Complex With The Forssman Disaccharide
Length = 253
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 134/250 (53%), Gaps = 31/250 (12%)
Query: 30 NFQSFTEQNRNELSF---DNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWRDNK 85
N QSF+ +N N SF ++TV+ +Q+T G P + GRA Y Q++ +
Sbjct: 2 NIQSFSFKNFNSPSFILQGDATVSSGKLQLTKVKENGIPTPSSLGRAFYSSPIQIYDKST 61
Query: 86 NVKATFSTTFVLNILNQT-AQPGEGLAFVIAGNKDLPENSE----GQWLGIVNG-ITNGT 139
A+++T+F + I + A +G+AF + +P SE G +LG+ + + N
Sbjct: 62 GAVASWATSFTVKISAPSKASFADGIAFAL-----VPVGSEPRRNGGYLGVFDSDVYN-- 114
Query: 140 NQSQIVAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQ 199
N +Q VA+EFDT + D + H+G+DVNS+ SI V +LANG + ++ + Y+
Sbjct: 115 NSAQTVAVEFDTLSNSGWDPSMKHIGIDVNSIKSIATVSW---DLANGENAEILITYNAA 171
Query: 200 NITVFVANMETP------LLSEPIDLSEYLPEKVFVGFSASTGDD---TQLNCVKSWAFD 250
++ VA++ P +LSE +D++ LPE V VGFSA+TG + + V SW+F
Sbjct: 172 T-SLLVASLVHPSRRTSYILSERVDITNELPEYVSVGFSATTGLSEGYIETHDVLSWSF- 229
Query: 251 GSDIGGDSKA 260
S + DS A
Sbjct: 230 ASKLPDDSTA 239
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 17/205 (8%)
Query: 326 KLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+LG G FG V+ G + + ++AVK + + S F+AE + L+H+ LV+L
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VV 83
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ ++ EYM NGSL F+ P + L K L + ++ + ++ E+
Sbjct: 84 TQEPIYIITEYMENGSLVDFL------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ER 134
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HRD++++NI++ + ++ DFGLAR I++N ++ +E A P + APE+ G
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYG 191
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 17/205 (8%)
Query: 326 KLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+LG G FG V+ G + + ++AVK + + S F+AE + L+H+ LV+L
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VV 82
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ ++ EYM NGSL F+ P + L K L + ++ + ++ E+
Sbjct: 83 TQEPIYIITEYMENGSLVDFL------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ER 133
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HRD++++NI++ + ++ DFGLAR I++N ++ +E A P + APE+ G
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYG 190
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 191 TFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 17/205 (8%)
Query: 326 KLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+LG G FG V+ G + + ++AVK + + S F+AE + L+H+ LV+L
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VV 87
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ ++ EYM NGSL F+ P + L K L + ++ + ++ E+
Sbjct: 88 TQEPIYIITEYMENGSLVDFL------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ER 138
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HRD++++NI++ + ++ DFGLAR I++N ++ +E A P + APE+ G
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYG 195
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 196 TFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 17/205 (8%)
Query: 326 KLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+LG G FG V+ G + + ++AVK + + S F+AE + L+H+ LV+L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ ++ EYM NGSL F+ P + L K L + ++ + ++ E+
Sbjct: 78 TQEPIYIITEYMENGSLVDFL------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ER 128
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HRD++++NI++ + ++ DFGLAR I++N ++ +E A P + APE+ G
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYG 185
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 17/205 (8%)
Query: 326 KLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+LG G FG V+ G + + ++AVK + + S F+AE + L+H+ LV+L
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VV 72
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ ++ EYM NGSL F+ P + L K L + ++ + ++ E+
Sbjct: 73 TQEPIYIITEYMENGSLVDFL------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ER 123
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HRD++++NI++ + ++ DFGLAR I++N ++ +E A P + APE+ G
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYG 180
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 181 TFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 127/232 (54%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSETS-RQG 357
AP + +L+ LK+ LG G FGTVYKGIW + +A+K ++ET+ +
Sbjct: 3 APNQAQLRILKET--ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA 60
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
EF+ E + S+ H +LV+L+G C LV + MP+G L +++ + N G ++
Sbjct: 61 NVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIG-SQL 118
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + + YL E+R++HRD+ + N+++ S + ++ DFGLAR ++
Sbjct: 119 LLNWCVQIA------KGMMYL---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 169
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
+ K +++ P +MA E + T ++D++++GV I E+ G KP
Sbjct: 170 DEKEYNADG--GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 134/246 (54%), Gaps = 24/246 (9%)
Query: 291 LDDDIEGLINGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------E 344
L+ ++ + + AP + +L+ LK+ LG G FGTVYKGIW +
Sbjct: 12 LETELVEPLTPSGTAPNQAQLRILKET--ELKRVKVLGSGAFGTVYKGIWVPEGETVKIP 69
Query: 345 IAVKRVSETS-RQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDK 403
+A+K ++ET+ + EF+ E + S+ H +LV+L+G C LV + MP+G L +
Sbjct: 70 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLE 128
Query: 404 FIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN 463
++ + N G ++ LNW +++ + + YL E+R++HRD+ + N+++ S +
Sbjct: 129 YVHEHKDNIG-SQLLLNWCVQIA------KGMMYL---EERRLVHRDLAARNVLVKSPNH 178
Query: 464 ARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVA 522
++ DFGLAR ++ + K +++ + P +MA E + T ++D++++GV I E+
Sbjct: 179 VKITDFGLARLLEGDEKEYNA--DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 236
Query: 523 C-GRKP 527
G KP
Sbjct: 237 TFGGKP 242
>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia.
pdb|1FNZ|A Chain A, A Bark Lectin From Robinia Pseudoacacia In Complex With N-
Acetylgalactosamine
Length = 237
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 119/236 (50%), Gaps = 17/236 (7%)
Query: 26 SLHFNFQSFTEQNRNELSFDNSTVAKSAI-QVTYDVRGAPITNQSGRAIYKDQFQLWRDN 84
SL F+F F ++ ++ V + + Q+T V G P + GRA+Y FQ+W
Sbjct: 3 SLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDST 62
Query: 85 KNVKATFSTTFVLNI-LNQTAQPGEGLAFVIAGNKDLPENSEGQWLGIV-NGITNGTNQS 142
A+F T+F I A +GLAF +A P + G LGI +G N +NQ
Sbjct: 63 TGNVASFVTSFTFIIQAPNPATTADGLAFFLAPVDTQPLDLGGM-LGIFKDGYFNKSNQ- 120
Query: 143 QIVAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQ--- 199
IVA+EFDT + + D H+G++VNS+ SI+ VP N NG V + Y+
Sbjct: 121 -IVAVEFDTFSNGDWDPKGRHLGINVNSIESIKTVPW---NWTNGEVANVFISYEASTKS 176
Query: 200 -NITVFVANMETPLLSEPI-DLSEYLPEKVFVGFSASTGDD---TQLNCVKSWAFD 250
++ ++ET + + I D+ LPE V GFSA+TG D Q N V SW+F+
Sbjct: 177 LTASLVYPSLETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFE 232
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 136/289 (47%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWRN-------KEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G R+ +AVK V+E+ S + + EF+ E + + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L+V E M +G L ++ E + PG ++ + + + +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ K+ +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV-RWM 199
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
APES G T +D+++FGV++ E+ Q Q N ++ ++ + G LD
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMD----GGYLD 252
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ E V L C NP++RP+ ++ +L + P
Sbjct: 253 QPDNC---------PERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHP 292
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 20/211 (9%)
Query: 325 NKLGKGGFGTVY--KGIWRNKEIAVKRVSETSRQGKQ---EFIAEVTTIGSLRHRNLVKL 379
+KLG GG TVY + N ++A+K + R+ ++ F EV L H+N+V +
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
I E + LV EY+ +L ++I + GP V + I+ T+Q LD +
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVD-------TAINFTNQILDGIK 125
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
+ + R++HRDIK NI++DS ++ DFG+A+ + E T T + GT Y +PE
Sbjct: 126 HAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ--TNHVLGTVQYFSPEQ 183
Query: 500 FLVGRATIE-TDIYAFGVLILEVACGRKPGN 529
G AT E TDIY+ G+++ E+ G P N
Sbjct: 184 -AKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWR-------NKEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G+ + +A+K V+E S + + EF+ E + + ++V
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L++ E M G L ++ E + P + K + + + +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ + +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 137 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV-RWM 192
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
+PES G T +D+++FGV++ E+A Q Q N ++ ++ E G +LD
Sbjct: 193 SPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVME----GGLLD 245
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ + +L L C NP +RPS ++ + E +P
Sbjct: 246 KPDNCP---------DMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEP 285
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 111/205 (54%), Gaps = 17/205 (8%)
Query: 326 KLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+LG G FG V+ G + + ++AVK + + S F+AE + L+H+ LV+L
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VV 86
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ ++ EYM NGSL F+ P + L K L + ++ + ++ E+
Sbjct: 87 TQEPIYIITEYMENGSLVDFL------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ER 137
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HRD++++NI++ + ++ DFGLAR I++N + +E A P + APE+ G
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYG 194
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 195 TFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 111/205 (54%), Gaps = 17/205 (8%)
Query: 326 KLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+LG G FG V+ G + + ++AVK + + S F+AE + L+H+ LV+L
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VV 83
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ ++ EYM NGSL F+ P + L K L + ++ + ++ E+
Sbjct: 84 TQEPIYIITEYMENGSLVDFL------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ER 134
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HRD++++NI++ + ++ DFGLAR I++N + +E A P + APE+ G
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYG 191
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWRN-------KEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G R+ +AVK V+E+ S + + EF+ E + + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L+V E M +G L ++ E + PG ++ + + + +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ K+ +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV-RWM 199
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
APES G T +D+++FGV++ E+ Q Q N ++ ++ + G LD
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMD----GGYLD 252
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ E V L C NP +RP+ ++ +L + P
Sbjct: 253 QPDNC---------PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 292
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 111/205 (54%), Gaps = 17/205 (8%)
Query: 326 KLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+LG G FG V+ G + + ++AVK + + S F+AE + L+H+ LV+L
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VV 79
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ ++ EYM NGSL F+ P + L K L + ++ + ++ E+
Sbjct: 80 TQEPIYIITEYMENGSLVDFL------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ER 130
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HRD++++NI++ + ++ DFGLAR I++N + +E A P + APE+ G
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYG 187
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 111/205 (54%), Gaps = 17/205 (8%)
Query: 326 KLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+LG G FG V+ G + + ++AVK + + S F+AE + L+H+ LV+L
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VV 85
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ ++ EYM NGSL F+ P + L K L + ++ + ++ E+
Sbjct: 86 TQEPIYIITEYMENGSLVDFL------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ER 136
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HRD++++NI++ + ++ DFGLAR I++N + +E A P + APE+ G
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYG 193
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 194 TFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWRN-------KEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G R+ +AVK V+E+ S + + EF+ E + + ++V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L+V E M +G L ++ E + PG ++ + + + +
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ K+ +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 141 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV-RWM 196
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
APES G T +D+++FGV++ E+ Q Q N ++ ++ + G LD
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMD----GGYLD 249
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ E V L C NP +RP+ ++ +L + P
Sbjct: 250 QPDNC---------PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 289
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 111/205 (54%), Gaps = 17/205 (8%)
Query: 326 KLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+LG G FG V+ G + + ++AVK + + S F+AE + L+H+ LV+L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ ++ EYM NGSL F+ P + L K L + ++ + ++ E+
Sbjct: 78 TQEPIYIITEYMENGSLVDFL------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ER 128
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HRD++++NI++ + ++ DFGLAR I++N + +E A P + APE+ G
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYG 185
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 111/205 (54%), Gaps = 17/205 (8%)
Query: 326 KLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+LG G FG V+ G + + ++AVK + + S F+AE + L+H+ LV+L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ ++ EYM NGSL F+ P + L K L + ++ + ++ E+
Sbjct: 78 TQEPIYIITEYMENGSLVDFL------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ER 128
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HRD++++NI++ + ++ DFGLAR I++N + +E A P + APE+ G
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYG 185
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWR-------NKEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G+ + +A+K V+E S + + EF+ E + + ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L++ E M G L ++ E + P + K + + + +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ + +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 146 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV-RWM 201
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
+PES G T +D+++FGV++ E+A Q Q N ++ ++ E G +LD
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVME----GGLLD 254
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ F M C NP +RPS ++ + E +P
Sbjct: 255 KPDNCPDMLFELMRM---------CWQYNPKMRPSFLEIISSIKEEMEP 294
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 111/205 (54%), Gaps = 17/205 (8%)
Query: 326 KLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+LG G FG V+ G + + ++AVK + + S F+AE + L+H+ LV+L
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VV 78
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ ++ EYM NGSL F+ P + L K L + ++ + ++ E+
Sbjct: 79 TQEPIYIITEYMENGSLVDFL------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ER 129
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HRD++++NI++ + ++ DFGLAR I++N + +E A P + APE+ G
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYG 186
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWRN-------KEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G R+ +AVK V+E+ S + + EF+ E + + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L+V E M +G L ++ E + PG ++ + + + +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ K+ +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV-RWM 199
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
APES G T +D+++FGV++ E+ Q Q N ++ ++ + G LD
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMD----GGYLD 252
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ E V L C NP +RP+ ++ +L + P
Sbjct: 253 QPDNC---------PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 292
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 111/205 (54%), Gaps = 20/205 (9%)
Query: 326 KLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 380 IGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G CY R + L+ EY+P GSL ++ + + ++ TSQ
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL----------QAHAERIDHIKLLQYTSQICKG 129
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
+ KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P + A
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYA 188
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PES + ++ +D+++FGV++ E+
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 18/207 (8%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
++G G FGTVYKG W ++AVK +V + + + Q F EV + RH N++ +G+
Sbjct: 43 RIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
+ + +V ++ SL K + ET + + + T+Q +DYLH
Sbjct: 102 -TKDNLAIVTQWCEGSSLYKHLHVQETK-------FQMFQLIDIARQTAQGMDYLH---A 150
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLV- 502
K ++HRD+KS+NI L ++GDFGLA T++ ++ G+ +MAPE +
Sbjct: 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLA-TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 503 --GRATIETDIYAFGVLILEVACGRKP 527
+ ++D+Y++G+++ E+ G P
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|C Chain C, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 251
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 120/244 (49%), Gaps = 19/244 (7%)
Query: 29 FNFQSFTEQNRNE-LSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWRDNKN 86
F F F N L D +Q+T D G P + GRA Y +W
Sbjct: 6 FVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWDSATG 65
Query: 87 VKATFSTTFVLNILN-QTAQPGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGTNQSQIV 145
+ A+F+T+F I A +GLAF +A P+ S G +LG+ + +G+ Q V
Sbjct: 66 LVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPD-SGGGFLGLFDSAVSGSTY-QTV 123
Query: 146 AIEFDT-KKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQNITVF 204
A+EFDT + + D H+G DVNS+ SI+ V + +LANG KV + Y+ + +
Sbjct: 124 AVEFDTYENTVFTDPPYTHIGFDVNSISSIKTV---KWSLANGEAAKVLITYNSA-VKLL 179
Query: 205 VANMETP------LLSEPIDLSEYLPEKVFVGFSASTGDD---TQLNCVKSWAFDGSDIG 255
VA++ P +L++ +DLS LPE V VGFSA+TG + + V SW+F G
Sbjct: 180 VASLVYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDVFSWSFASKLAG 239
Query: 256 GDSK 259
+K
Sbjct: 240 XXTK 243
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 20/205 (9%)
Query: 326 KLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 380 IGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G CY R + L+ EY+P GSL ++ + ++ K L + ++Y
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-------QKHKERIDHIKLLQYTSQICKGMEY 133
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
L KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P + A
Sbjct: 134 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYA 189
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PES + ++ +D+++FGV++ E+
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYEL 214
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 115/205 (56%), Gaps = 20/205 (9%)
Query: 326 KLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 380 IGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G CY R + L+ EY+P GSL ++ + ++ K L + ++Y
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-------QKHKERIDHIKLLQYTSQICKGMEY 130
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
L KR +HR++ + NI++++E ++GDFGL + + ++ K ++ KE +P + A
Sbjct: 131 L---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQD-KEYYKVKEPGESPIFWYA 186
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PES + ++ +D+++FGV++ E+
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYEL 211
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 20/205 (9%)
Query: 326 KLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 380 IGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G CY R + L+ EY+P GSL ++ + ++ K L + ++Y
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-------QKHKERIDHIKLLQYTSQICKGMEY 128
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
L KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P + A
Sbjct: 129 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYA 184
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PES + ++ +D+++FGV++ E+
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYEL 209
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 113/206 (54%), Gaps = 20/206 (9%)
Query: 325 NKLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVK 378
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 379 LIGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
G CY R + L+ EY+P GSL ++ + ++ K L + ++
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------QKHKERIDHIKLLQYTSQICKGME 159
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-M 495
YL KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P +
Sbjct: 160 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWY 215
Query: 496 APESFLVGRATIETDIYAFGVLILEV 521
APES + ++ +D+++FGV++ E+
Sbjct: 216 APESLTESKFSVASDVWSFGVVLYEL 241
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 112/205 (54%), Gaps = 17/205 (8%)
Query: 326 KLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+LG G FG V+ G + + ++AVK + + S F+AE + L+H+ LV+L
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VV 73
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ ++ EYM NGSL F+ P + L K L + ++ + ++ E+
Sbjct: 74 TQEPIYIITEYMENGSLVDFL------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ER 124
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HR+++++NI++ + ++ DFGLAR I++N ++ +E A P + APE+ G
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYG 181
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 182 TFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 20/205 (9%)
Query: 326 KLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 380 IGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G CY R + L+ EY+P GSL ++ + ++ K L + ++Y
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-------QKHKERIDHIKLLQYTSQICKGMEY 132
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
L KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P + A
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYA 188
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PES + ++ +D+++FGV++ E+
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 20/205 (9%)
Query: 326 KLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 380 IGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G CY R + L+ EY+P GSL ++ + ++ K L + ++Y
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-------QKHKERIDHIKLLQYTSQICKGMEY 129
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
L KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P + A
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYA 185
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PES + ++ +D+++FGV++ E+
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 113/206 (54%), Gaps = 20/206 (9%)
Query: 325 NKLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVK 378
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 379 LIGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
G CY R + L+ EY+P GSL ++ + ++ K L + ++
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-------QKHKERIDHIKLLQYTSQICKGME 126
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-M 495
YL KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P +
Sbjct: 127 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWY 182
Query: 496 APESFLVGRATIETDIYAFGVLILEV 521
APES + ++ +D+++FGV++ E+
Sbjct: 183 APESLTESKFSVASDVWSFGVVLYEL 208
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 20/205 (9%)
Query: 326 KLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 380 IGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G CY R + L+ EY+P GSL ++ + ++ K L + ++Y
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-------QKHKERIDHIKLLQYTSQICKGMEY 134
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
L KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P + A
Sbjct: 135 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYA 190
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PES + ++ +D+++FGV++ E+
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYEL 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 20/205 (9%)
Query: 326 KLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 380 IGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G CY R + L+ EY+P GSL ++ + ++ K L + ++Y
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-------QKHKERIDHIKLLQYTSQICKGMEY 135
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
L KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P + A
Sbjct: 136 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYA 191
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PES + ++ +D+++FGV++ E+
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYEL 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 20/205 (9%)
Query: 326 KLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 380 IGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G CY R + L+ EY+P GSL ++ + ++ K L + ++Y
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-------QKHKERIDHIKLLQYTSQICKGMEY 129
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
L KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P + A
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYA 185
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PES + ++ +D+++FGV++ E+
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYEL 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 20/205 (9%)
Query: 326 KLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 380 IGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G CY R + L+ EY+P GSL ++ + ++ K L + ++Y
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-------QKHKERIDHIKLLQYTSQICKGMEY 136
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
L KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P + A
Sbjct: 137 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYA 192
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PES + ++ +D+++FGV++ E+
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYEL 217
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWRN-------KEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G R+ +AVK V+E+ S + + EF+ E + + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L+V E M +G L ++ E + PG ++ + + + +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ K+ +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWM 199
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
APES G T +D+++FGV++ E+ Q Q N ++ ++ + G LD
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMD----GGYLD 252
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ E V L C NP +RP+ ++ +L + P
Sbjct: 253 QPDNC---------PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 292
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 113/207 (54%), Gaps = 17/207 (8%)
Query: 324 KNKLGKGGFGTVYKGIW-RNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGW 382
+ KLG G FG V+ + ++ ++AVK + S + F+AE + +L+H LVKL
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHA- 77
Query: 383 CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGS 442
+ ++ E+M GSL F+ DE + P +I ++Q + +
Sbjct: 78 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP---------KLIDFSAQIAEGMAFIE 128
Query: 443 EKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFL 501
++ +HRD++++NI++ + ++ DFGLAR I++N ++ +E A P + APE+
Sbjct: 129 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN---EYTAREGAKFPIKWTAPEAIN 185
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKP 527
G TI++D+++FG+L++E+ GR P
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 20/205 (9%)
Query: 326 KLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 380 IGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G CY R + L+ EY+P GSL ++ + ++ K L + ++Y
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-------QKHKERIDHIKLLQYTSQICKGMEY 129
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
L KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P + A
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEFFKVKEPGESPIFWYA 185
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PES + ++ +D+++FGV++ E+
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYEL 210
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWR-------NKEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G+ + +A+K V+E S + + EF+ E + + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L++ E M G L ++ E + P + K + + + +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ + +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 152 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWM 207
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
+PES G T +D+++FGV++ E+A Q Q N ++ ++ E G +LD
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATL---AEQPYQGLSNEQVLRFVME----GGLLD 260
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ F M C NP +RPS ++ + E +P
Sbjct: 261 KPDNCPDMLFELMRM---------CWQYNPKMRPSFLEIISSIKEEMEP 300
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 20/205 (9%)
Query: 326 KLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 380 IGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G CY R + L+ EY+P GSL ++ + ++ K L + ++Y
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-------QKHKERIDHIKLLQYTSQICKGMEY 147
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
L KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P + A
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYA 203
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PES + ++ +D+++FGV++ E+
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYEL 228
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 20/205 (9%)
Query: 326 KLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 380 IGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G CY R + L+ EY+P GSL ++ + ++ K L + ++Y
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------IDHIKLLQYTSQICKGMEY 147
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
L KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P + A
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYA 203
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PES + ++ +D+++FGV++ E+
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYEL 228
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 137/310 (44%), Gaps = 30/310 (9%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWR-------NKEIAVKRVSET-SRQ 356
A F E + A +LG+G FG VY+G+ + +A+K V+E S +
Sbjct: 2 AADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 61
Query: 357 GKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGP 414
+ EF+ E + + ++V+L+G + L++ E M G L ++ E + P
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 415 GEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLART 474
+ K + + + + YL+ + +HRD+ + N M+ +F ++GDFG+ R
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 475 IQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQN 534
I E K + +M+PES G T +D+++FGV++ E+A Q Q
Sbjct: 179 IYETDYYRKGGKGLLPV-RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQG 234
Query: 535 SYNNSIVHWLWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTV 594
N ++ ++ E G +LD D+ F M C NP +RPS +
Sbjct: 235 LSNEQVLRFVME----GGLLDKPDNCPDMLFELMRM---------CWQYNPKMRPSFLEI 281
Query: 595 LQVLSGEADP 604
+ + E +P
Sbjct: 282 ISSIKEEMEP 291
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWR-------NKEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G+ + +A+K V+E S + + EF+ E + + ++V
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L++ E M G L ++ E + P + K + + + +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ + +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 174 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWM 229
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
+PES G T +D+++FGV++ E+A Q Q N ++ ++ E G +LD
Sbjct: 230 SPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVME----GGLLD 282
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ F M C NP +RPS ++ + E +P
Sbjct: 283 KPDNCPDMLFELMRM---------CWQYNPKMRPSFLEIISSIKEEMEP 322
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWRN-------KEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G R+ +AVK V+E+ S + + EF+ E + + ++V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L+V E M +G L ++ E + PG ++ + + + +
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ K+ +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 143 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWM 198
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
APES G T +D+++FGV++ E+ Q Q N ++ ++ + G LD
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMD----GGYLD 251
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ E V L C NP +RP+ ++ +L + P
Sbjct: 252 QPDNC---------PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 291
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWR-------NKEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G+ + +A+K V+E S + + EF+ E + + ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L++ E M G L ++ E + P + K + + + +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ + +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 145 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWM 200
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
+PES G T +D+++FGV++ E+A Q Q N ++ ++ E G +LD
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVME----GGLLD 253
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ F M C NP +RPS ++ + E +P
Sbjct: 254 KPDNCPDMLFELMRM---------CWQYNPKMRPSFLEIISSIKEEMEP 293
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWR-------NKEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G+ + +A+K V+E S + + EF+ E + + ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L++ E M G L ++ E + P + K + + + +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ + +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 145 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWM 200
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
+PES G T +D+++FGV++ E+A Q Q N ++ ++ E G +LD
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVME----GGLLD 253
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ F M C NP +RPS ++ + E +P
Sbjct: 254 KPDNCPDMLFELMRM---------CWQYNPKMRPSFLEIISSIKEEMEP 293
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWR-------NKEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G+ + +A+K V+E S + + EF+ E + + ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L++ E M G L ++ E + P + K + + + +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ + +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 146 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWM 201
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
+PES G T +D+++FGV++ E+A Q Q N ++ ++ E G +LD
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVME----GGLLD 254
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ F M C NP +RPS ++ + E +P
Sbjct: 255 KPDNCPDMLFELMRM---------CWQYNPKMRPSFLEIISSIKEEMEP 294
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 119/235 (50%), Gaps = 30/235 (12%)
Query: 311 LKELKKATGNFNPKN------KLGKGGFGTVYKGIWRNKEIAV----KRVSETSRQGKQE 360
+K+ + T + NP++ +LG G FG VYK +NKE +V K + S + ++
Sbjct: 23 MKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELED 80
Query: 361 FIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLN 420
++ E+ + S H N+VKL+ Y ++ ++ E+ G++D + E ++ +
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV- 139
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
V T AL+YLH+ +++HRD+K+ NI+ + + +L DFG++ +N +
Sbjct: 140 ------VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTR 187
Query: 481 THHSTKEIAGTPGYMAPESFLVGRAT-----IETDIYAFGVLILEVACGRKPGNQ 530
T GTP +MAPE + + + D+++ G+ ++E+A P ++
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE 242
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 114/205 (55%), Gaps = 20/205 (9%)
Query: 326 KLGKGGFGTV----YKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LGKG FG+V Y + N + +AVK++ ++ + ++F E+ + SL+H N+VK
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 380 IGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G CY R + L+ E++P GSL +++ + ++ K L + ++Y
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYL-------QKHKERIDHIKLLQYTSQICKGMEY 132
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
L KR +HRD+ + NI++++E ++GDFGL + + ++ K KE +P + A
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEXXKVKEPGESPIFWYA 188
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PES + ++ +D+++FGV++ E+
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWR-------NKEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G+ + +A+K V+E S + + EF+ E + + ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L++ E M G L ++ E + P + K + + + +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ + +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 139 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWM 194
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
+PES G T +D+++FGV++ E+A Q Q N ++ ++ E G +LD
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVME----GGLLD 247
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ F M C NP +RPS ++ + E +P
Sbjct: 248 KPDNCPDMLFELMRM---------CWQYNPKMRPSFLEIISSIKEEMEP 287
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 14/205 (6%)
Query: 325 NKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+LG G FG V+ G + N + + Q F+ E + +L+H LV+L
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
++ EYM GSL F+ DE G+V L +I ++Q + + K
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEG----GKVLLP-----KLIDFSAQIAEGMAYIERK 129
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HRD++++N+++ ++ DFGLAR I++N ++ +E A P + APE+ G
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN---EYTAREGAKFPIKWTAPEAINFG 186
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ G+ P
Sbjct: 187 CFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 113/207 (54%), Gaps = 17/207 (8%)
Query: 324 KNKLGKGGFGTVYKGIW-RNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGW 382
+ KLG G FG V+ + ++ ++AVK + S + F+AE + +L+H LVKL
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHA- 250
Query: 383 CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGS 442
+ ++ E+M GSL F+ DE + P +I ++Q + +
Sbjct: 251 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP---------KLIDFSAQIAEGMAFIE 301
Query: 443 EKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFL 501
++ +HRD++++NI++ + ++ DFGLAR I++N ++ +E A P + APE+
Sbjct: 302 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN---EYTAREGAKFPIKWTAPEAIN 358
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKP 527
G TI++D+++FG+L++E+ GR P
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 147/311 (47%), Gaps = 52/311 (16%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSETSRQGKQEFIAEVTTIGSLR 372
N K +LG+G FG V+ N +AVK + + S +++F E + +L+
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 73
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--------IFYDETNSGPGEVTLNWEKR 424
H ++VK G C E ++V+EYM +G L+KF + E N P E+T + +
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNP-PTELTQS--QM 130
Query: 425 LSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHS 484
L + + + YL + + +HRD+ + N ++ ++GDFG++R + ++
Sbjct: 131 LHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST--DYYR 185
Query: 485 TKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVH 542
P +M PES + + T E+D+++ GV++ E+ G++P Q NN ++
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS----NNEVI- 240
Query: 543 WLWELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMK---TVLQ 596
E +GR+L ++ C V L L C PH+R ++K T+LQ
Sbjct: 241 ---ECITQGRVL------------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285
Query: 597 VLSGEADPPVL 607
L+ +A P L
Sbjct: 286 NLA-KASPVYL 295
>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|D Chain D, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 239
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 105/202 (51%), Gaps = 17/202 (8%)
Query: 59 DVRGAPITNQSGRAIYKDQFQLWRDNKNVKATFSTTFVLNILN-QTAQPGEGLAFVIAGN 117
D G P + GRA Y +W + A+F+T+F I A +GLAF +A
Sbjct: 38 DSNGVPEPSSLGRATYSAPINIWDSATGLVASFATSFRFTIYAPNIATIADGLAFFLAPV 97
Query: 118 KDLPENSEGQWLGIVNGITNGTNQSQIVAIEFDT-KKSYEQDINDNHVGLDVNSVYSIRQ 176
P+ S G +LG+ + T Q VA+EFDT + + D H+G DVNS+ SI+
Sbjct: 98 ASAPD-SGGGFLGLFDSAVGDTTY-QTVAVEFDTYENTVFTDPPYTHIGFDVNSISSIKT 155
Query: 177 VPLTRVNLANGTDIKVQVRYDGQNITVFVANMETP------LLSEPIDLSEYLPEKVFVG 230
V + +LANG KV + Y+ + + VA++ P +L++ +DLS LPE V VG
Sbjct: 156 V---KWSLANGEAAKVLITYNSA-VKLLVASLVYPSSKTSFILADIVDLSSVLPEWVRVG 211
Query: 231 FSASTGDD---TQLNCVKSWAF 249
FSA+TG + + V SW+F
Sbjct: 212 FSAATGASKGYIETHDVFSWSF 233
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 136/289 (47%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWRN-------KEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G R+ +AVK V+E+ S + + EF+ E + + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L+V E M +G L ++ E + PG ++ + + + +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ K+ +HR++ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 144 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWM 199
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
APES G T +D+++FGV++ E+ Q Q N ++ ++ + G LD
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMD----GGYLD 252
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ E V L C NP++RP+ ++ +L + P
Sbjct: 253 QPDNC---------PERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHP 292
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 136/289 (47%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWRN-------KEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G R+ +AVK V+E+ S + + EF+ E + + ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L+V E M +G L ++ E + PG ++ + + + +
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ K+ +HR++ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 145 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWM 200
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
APES G T +D+++FGV++ E+ Q Q N ++ ++ + G LD
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMD----GGYLD 253
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ E V L C NP++RP+ ++ +L + P
Sbjct: 254 QPDNC---------PERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHP 293
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 118/235 (50%), Gaps = 30/235 (12%)
Query: 311 LKELKKATGNFNPKN------KLGKGGFGTVYKGIWRNKEIAV----KRVSETSRQGKQE 360
+K+ + T + NP++ +LG G FG VYK +NKE +V K + S + ++
Sbjct: 23 MKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELED 80
Query: 361 FIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLN 420
++ E+ + S H N+VKL+ Y ++ ++ E+ G++D + E ++ +
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV- 139
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
V T AL+YLH+ +++HRD+K+ NI+ + + +L DFG++ +N +
Sbjct: 140 ------VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTR 187
Query: 481 THHSTKEIAGTPGYMAPESFLVGRAT-----IETDIYAFGVLILEVACGRKPGNQ 530
GTP +MAPE + + + D+++ G+ ++E+A P ++
Sbjct: 188 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE 242
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWR-------NKEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G+ + +A+K V+E S + + EF+ E + + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L++ E M G L ++ + P + K + + + +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ + +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 152 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWM 207
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
+PES G T +D+++FGV++ E+A Q Q N ++ ++ E G +LD
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATL---AEQPYQGLSNEQVLRFVME----GGLLD 260
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ F M C NP +RPS ++ + E +P
Sbjct: 261 KPDNCPDMLFELMRM---------CWQYNPKMRPSFLEIISSIKEEMEP 300
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWR-------NKEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G+ + +A+K V+E S + + EF+ E + + ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L++ E M G L ++ E + P + K + + + +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ + +HRD+ + N + +F ++GDFG+ R I E K + +M
Sbjct: 139 AYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWM 194
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
+PES G T +D+++FGV++ E+A Q Q N ++ ++ E G +LD
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVME----GGLLD 247
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ + +L L C NP +RPS ++ + E +P
Sbjct: 248 KPDNCP---------DMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEP 287
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 118/235 (50%), Gaps = 30/235 (12%)
Query: 311 LKELKKATGNFNPKN------KLGKGGFGTVYKGIWRNKEIAV----KRVSETSRQGKQE 360
+K+ + T + NP++ +LG G FG VYK +NKE +V K + S + ++
Sbjct: 23 MKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELED 80
Query: 361 FIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLN 420
++ E+ + S H N+VKL+ Y ++ ++ E+ G++D + E ++ +
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV- 139
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
V T AL+YLH+ +++HRD+K+ NI+ + + +L DFG++ +N +
Sbjct: 140 ------VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTR 187
Query: 481 THHSTKEIAGTPGYMAPESFLVGRAT-----IETDIYAFGVLILEVACGRKPGNQ 530
GTP +MAPE + + + D+++ G+ ++E+A P ++
Sbjct: 188 XIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE 242
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 14/205 (6%)
Query: 325 NKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
KLG G FG V+ G + N + + Q F+ E + +L+H LV+L
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ ++ E+M GSL F+ DE G+V L +I ++Q + + K
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEG----GKVLLP-----KLIDFSAQIAEGMAYIERK 128
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVG 503
+HRD++++N+++ ++ DFGLAR I++N ++ +E A P + APE+ G
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN---EYTAREGAKFPIKWTAPEAINFG 185
Query: 504 RATIETDIYAFGVLILEVAC-GRKP 527
TI++++++FG+L+ E+ G+ P
Sbjct: 186 CFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 112/210 (53%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRN----KEIAVK----RVSETSRQGKQEFIAEVTTIGSLRHRNLVK 378
+G G FG VYKG+ + KE+ V + T +Q + +F+ E +G H N+++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQ-RVDFLGEAGIMGQFSHHNIIR 110
Query: 379 LIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYL 438
L G + +++ EYM NG+LDKF+ GE ++ + + ++ G + + YL
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFL-----REKDGEFSV--LQLVGMLRGIAAGMKYL 163
Query: 439 HNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPE 498
N +HRD+ + NI+++S ++ DFGL+R ++++ + ++T + APE
Sbjct: 164 AN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 499 SFLVGRATIETDIYAFGVLILEVAC-GRKP 527
+ + T +D+++FG+++ EV G +P
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 30/289 (10%)
Query: 326 KLGKGGFGTVYKGIWR-------NKEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLV 377
+LG+G FG VY+G+ + +A+K V+E S + + EF+ E + + ++V
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+L+G + L++ E M G L ++ + P + K + + + +
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
YL+ + +HRD+ + N M+ +F ++GDFG+ R I E K + +M
Sbjct: 142 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RWM 197
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILD 555
+PES G T +D+++FGV++ E+A Q Q N ++ ++ E G +LD
Sbjct: 198 SPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVME----GGLLD 250
Query: 556 AADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADP 604
D+ F M C NP +RPS ++ + E +P
Sbjct: 251 KPDNCPDMLFELMRM---------CWQYNPKMRPSFLEIISSIKEEMEP 290
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 24/236 (10%)
Query: 301 GTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-T 353
G+ AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E T
Sbjct: 1 GSGEAPNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 58
Query: 354 SRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSG 413
S + +E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIG 117
Query: 414 PGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR 473
+ LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+
Sbjct: 118 -SQYLLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 167
Query: 474 TIQENLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
+ K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 168 LLGAEEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 125/237 (52%), Gaps = 24/237 (10%)
Query: 300 NGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE- 352
G+ AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E
Sbjct: 23 QGSGEAPNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 80
Query: 353 TSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNS 412
TS + +E + E + S+ + ++ +L+G C L+ + MP G L ++ + N
Sbjct: 81 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNI 139
Query: 413 GPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLA 472
G + LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA
Sbjct: 140 G-SQYLLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLA 189
Query: 473 RTIQENLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
+ + K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 190 KLLGAEEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 109/207 (52%), Gaps = 19/207 (9%)
Query: 325 NKLGKGGFGTVYKGIWRNK-EIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
+LG G FG V G WR + ++A+K + E S + EFI E + +L H LV+L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
++ ++ EYM NG L ++ ++ L + +A++YL +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL-------REMRHRFQTQQLLEMCKDVCEAMEYLES--- 138
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHH--STKEIAGTPGYMAPESFL 501
K+ LHRD+ + N +++ + ++ DFGL+R + ++ +T S + +P PE +
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSP----PEVLM 194
Query: 502 VGRATIETDIYAFGVLILEV-ACGRKP 527
+ + ++DI+AFGVL+ E+ + G+ P
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
++++ EYM GSL F+ G L + + + + + Y+ +
Sbjct: 85 EPIYIVI-EYMSKGSLLDFL------KGEMGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 191
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ +V EYM GSL F+ G L + + + + + Y+ +
Sbjct: 78 EPIY-IVTEYMSKGSLLDFL------KGETGKYLRLPQLVDMAAQIASGMAYVERMN--- 127
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 184
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 185 FTIKSDVWSFGILLTELTTKGRVP 208
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ +V EYM GSL F+ G L + + + + + Y+ +
Sbjct: 251 EPIY-IVTEYMSKGSLLDFL------KGETGKYLRLPQLVDMAAQIASGMAYVERMN--- 300
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 357
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVP 381
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 24/236 (10%)
Query: 301 GTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-T 353
G+ AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E T
Sbjct: 1 GSGEAPNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 58
Query: 354 SRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSG 413
S + +E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIG 117
Query: 414 PGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR 473
+ LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+
Sbjct: 118 -SQYLLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 167
Query: 474 TIQENLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
+ K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 168 LLGAEEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The
Dimmanoside Man(Alpha1-2)man
pdb|1Q8O|B Chain B, Pterocartpus Angolensis Lectin Pal In Complex With The
Dimmanoside Man(Alpha1-2)man
pdb|1Q8P|A Chain A, Pterocarpus Angolensis Lectin Pal In Complex With The
Dimannoside Man(Alpha1-3)man
pdb|1Q8P|B Chain B, Pterocarpus Angolensis Lectin Pal In Complex With The
Dimannoside Man(Alpha1-3)man
pdb|1Q8Q|A Chain A, Pterocarpus Angolensis Lectin (pal) In Complex With The
Dimannoside Man(alpha1-4)man
pdb|1Q8Q|B Chain B, Pterocarpus Angolensis Lectin (pal) In Complex With The
Dimannoside Man(alpha1-4)man
pdb|1Q8S|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Dimannoside Man(Alpha1-6)man
pdb|1Q8S|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Dimannoside Man(Alpha1-6)man
pdb|1Q8V|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Trimannoside [man(Alpha1-3)]man(Alpha1-6)man
pdb|1Q8V|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Trimannoside [man(Alpha1-3)]man(Alpha1-6)man
pdb|1UKG|A Chain A, Pterocarps Angolensis Lectin Pal In Complex With Methyl-
Alpha-Mannose
pdb|1UKG|B Chain B, Pterocarps Angolensis Lectin Pal In Complex With Methyl-
Alpha-Mannose
pdb|2GME|A Chain A, Metal-Free (Apo) P. Angolensis Seed Lectin
pdb|2GME|B Chain B, Metal-Free (Apo) P. Angolensis Seed Lectin
pdb|2GMM|A Chain A, Metal-Free (Apo) P. Angolensis Seed Lectin In Complex With
Man-Alpha(1-2)man
pdb|2GMM|B Chain B, Metal-Free (Apo) P. Angolensis Seed Lectin In Complex With
Man-Alpha(1-2)man
pdb|2GMP|A Chain A, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Glcnac- Beta(1-2)man
pdb|2GMP|B Chain B, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Glcnac- Beta(1-2)man
pdb|2GN3|A Chain A, Metal-Free (Apo-Pal) In Complex With Alpha-D-Met-Man
pdb|2GN3|B Chain B, Metal-Free (Apo-Pal) In Complex With Alpha-D-Met-Man
pdb|2GN7|A Chain A, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Man-alpha(1-3)man-alpha(1-6)man
pdb|2GN7|B Chain B, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Man-alpha(1-3)man-alpha(1-6)man
pdb|2GNB|A Chain A, Edta-Treated (2 Weeks) P. Angolensis Lectin
pdb|2GNB|B Chain B, Edta-Treated (2 Weeks) P. Angolensis Lectin
pdb|2GND|A Chain A, One Hour Edta Treatment, P. Angolensis Lectin
pdb|2GND|B Chain B, One Hour Edta Treatment, P. Angolensis Lectin
pdb|2GNM|A Chain A, P. Angolensis Lectin (Pal) Treated With Edta For 39 Hours
pdb|2GNM|B Chain B, P. Angolensis Lectin (Pal) Treated With Edta For 39 Hours
pdb|2GNT|A Chain A, Edta Treated P. Angolensis Lectin (Pal) Remetallized With
Calcium (1 Hour Treatment)
pdb|2GNT|B Chain B, Edta Treated P. Angolensis Lectin (Pal) Remetallized With
Calcium (1 Hour Treatment)
pdb|2AUY|A Chain A, Pterocarpus Angolensis Lectin In Complex With The
Trisaccharide Glcnac(b1-2)man(a1-3)man
pdb|2AUY|B Chain B, Pterocarpus Angolensis Lectin In Complex With The
Trisaccharide Glcnac(b1-2)man(a1-3)man
pdb|2PHF|A Chain A, Pterocarpus Angolensis Lectin Complexed With Man-6
pdb|2PHF|B Chain B, Pterocarpus Angolensis Lectin Complexed With Man-6
pdb|2PHR|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With
Man-7d1
pdb|2PHR|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With
Man-7d1
pdb|2PHT|A Chain A, Pterocarpus Angolensis Lectin (P L) In Complex With
Man-7d3
pdb|2PHT|B Chain B, Pterocarpus Angolensis Lectin (P L) In Complex With
Man-7d3
pdb|2PHU|A Chain A, Pterocarpus Angolensis Lectin In Complex With Man-8d1d3
pdb|2PHU|B Chain B, Pterocarpus Angolensis Lectin In Complex With Man-8d1d3
pdb|2PHW|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-9
pdb|2PHW|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-9
pdb|2PHX|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-5
pdb|2PHX|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-5
Length = 252
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 121/234 (51%), Gaps = 13/234 (5%)
Query: 26 SLHFNFQSFTEQNRNELSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWRDN 84
SL F F +F +N + ++ + +A+Q+T D G P+ + GR ++ Q LW +
Sbjct: 3 SLSFGFPTFPSDQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEKS 62
Query: 85 KNVKATFSTTFVLNILNQTAQPGEGLAFVIA-GNKDLP-ENSEGQWLGIVNGITNGTNQS 142
+ A F + F ++ + + +G+AF IA + +P + G G T+ +
Sbjct: 63 SSRVANFQSQFSFSLKSPLSNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSAN 122
Query: 143 QIVAIEFDT---KKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYD-- 197
Q++A+EFDT + S D N H+G+DVNS+ S++ V R +G + V V ++
Sbjct: 123 QVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVKWDR---RDGQSLNVLVTFNPS 179
Query: 198 GQNITVFVANMETPL--LSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
+N+ V + +S +D+ LPE V VGFSA++G+ Q + ++SW+F
Sbjct: 180 TRNLDVVATYSDGTRYEVSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSF 233
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ +V EYM GSL F+ G L + + + + + Y+ +
Sbjct: 251 EPIY-IVTEYMSKGSLLDFL------KGETGKYLRLPQLVDMAAQIASGMAYVERMN--- 300
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 357
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ +V EYM GSL F+ G L + + + + + Y+ +
Sbjct: 76 EPIY-IVTEYMSKGSLLDFL------KGEMGKYLRLPQLVDMAAQIASGMAYVERMN--- 125
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 182
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 183 FTIKSDVWSFGILLTELTTKGRVP 206
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ +V EYM GSL F+ G L + + + + + Y+ +
Sbjct: 74 EPIY-IVTEYMSKGSLLDFL------KGEMGKYLRLPQLVDMAAQIASGMAYVERMN--- 123
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 180
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 181 FTIKSDVWSFGILLTELTTKGRVP 204
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ +V EYM GSL F+ GE T + + ++ ++Q +
Sbjct: 82 EPIY-IVTEYMNKGSLLDFL--------KGE-TGKYLRLPQLVDMSAQIASGMAYVERMN 131
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 188
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 15/205 (7%)
Query: 325 NKLGKGGFGTVYKGIWRNK-EIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
+LG G FG V G WR + ++A+K + E S + EFI E + +L H LV+L G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
++ ++ EYM NG L ++ ++ L + +A++YL +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL-------REMRHRFQTQQLLEMCKDVCEAMEYLES--- 123
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
K+ LHRD+ + N +++ + ++ DFGL+R + ++ T S++ + PE +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT--SSRGSKFPVRWSPPEVLMYS 181
Query: 504 RATIETDIYAFGVLILEV-ACGRKP 527
+ + ++DI+AFGVL+ E+ + G+ P
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With
Alpha-Methyl Glucose
pdb|1N3O|B Chain B, Pterocarcpus Angolensis Lectin In Complex With
Alpha-Methyl Glucose
pdb|1N3P|A Chain A, Pterocarpus Angolensis Lectin In Complex With Sucrose
pdb|1N3P|B Chain B, Pterocarpus Angolensis Lectin In Complex With Sucrose
pdb|1N3Q|A Chain A, Pterocarpus Angolensis Lectin Complexed With Turanose
pdb|1N3Q|B Chain B, Pterocarpus Angolensis Lectin Complexed With Turanose
pdb|1S1A|A Chain A, Pterocarpus Angolensis Seed Lectin (Pal) With One Binding
Site Free And One Binding Site Containing The
Disaccharide Man(A1-3)manme
pdb|1S1A|B Chain B, Pterocarpus Angolensis Seed Lectin (Pal) With One Binding
Site Free And One Binding Site Containing The
Disaccharide Man(A1-3)manme
pdb|2AR6|A Chain A, Pterocarpus Angolensis Lectin (pal) In Complex With The
Pentasaccharide M592
pdb|2AR6|B Chain B, Pterocarpus Angolensis Lectin (pal) In Complex With The
Pentasaccharide M592
pdb|2ARB|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Glcnac(Beta1- 2)man Disaccharide
pdb|2ARB|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Glcnac(Beta1- 2)man Disaccharide
pdb|2ARE|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With
D-Mannose (Anomeric Mixture)
pdb|2ARE|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With
D-Mannose (Anomeric Mixture)
pdb|2ARX|A Chain A, Pterocarpus Angolensis Seed Lectin In Complex With The
Decasaccharide Na2f
pdb|2ARX|B Chain B, Pterocarpus Angolensis Seed Lectin In Complex With The
Decasaccharide Na2f
Length = 252
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 121/234 (51%), Gaps = 13/234 (5%)
Query: 26 SLHFNFQSFTEQNRNELSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWRDN 84
SL F F +F +N + ++ + +A+Q+T D G P+ + GR ++ Q LW +
Sbjct: 3 SLSFGFPTFPSDQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEKS 62
Query: 85 KNVKATFSTTFVLNILNQTAQPGEGLAFVIA-GNKDLP-ENSEGQWLGIVNGITNGTNQS 142
+ A F + F ++ + + +G+AF IA + +P + G G T+ +
Sbjct: 63 SSRVANFQSQFSFSLKSPLSNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSAN 122
Query: 143 QIVAIEFDT---KKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYD-- 197
Q++A+EFDT + S D N H+G+DVNS+ S++ V R +G + V V ++
Sbjct: 123 QVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVKWDR---RDGQSLNVLVTFNPS 179
Query: 198 GQNITVFVANMETPL--LSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
+N+ V + +S +D+ LPE V VGFSA++G+ Q + ++SW+F
Sbjct: 180 TRNLDVVATYSDGTRYEVSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSF 233
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ +V EYM GSL F+ G L + + + + + Y+ +
Sbjct: 85 EPIY-IVCEYMSKGSLLDFL------KGEMGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 191
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+V EYM GSL F+ GE T + + ++ +Q +
Sbjct: 334 -EPIYIVTEYMSKGSLLDFL--------KGE-TGKYLRLPQLVDMAAQIASGMAYVERMN 383
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 440
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 441 FTIKSDVWSFGILLTELTTKGRVP 464
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 325 NKLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
+LG G G V+ G + + ++AVK + + S F+AE + L+H+ LV+L
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-V 76
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
+ ++ EYM NGSL F+ P + L K L + ++ + ++ E
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL------KTPSGIKLTINKLLDMAAQIAEGMAFIE---E 127
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLV 502
+ +HRD++++NI++ + ++ DFGLAR I++ + +E A P + APE+
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIED---AEXTAREGAKFPIKWTAPEAINY 184
Query: 503 GRATIETDIYAFGVLILEVAC-GRKP 527
G TI++D+++FG+L+ E+ GR P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ +V EYM GSL F+ G L + + + + + Y+ +
Sbjct: 85 EPIY-IVTEYMSKGSLLDFL------KGEMGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 191
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 19/207 (9%)
Query: 325 NKLGKGGFGTVYKGIWRNK-EIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
+LG G FG V G WR + ++A+K + E S + EFI E + +L H LV+L G C
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
++ ++ EYM NG L ++ ++ L + +A++YL +
Sbjct: 73 TKQRPIFIITEYMANGCLLNYL-------REMRHRFQTQQLLEMCKDVCEAMEYLES--- 122
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHH--STKEIAGTPGYMAPESFL 501
K+ LHRD+ + N +++ + ++ DFGL+R + ++ T S + +P PE +
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLM 178
Query: 502 VGRATIETDIYAFGVLILEV-ACGRKP 527
+ + ++DI+AFGVL+ E+ + G+ P
Sbjct: 179 YSKFSSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 143/304 (47%), Gaps = 49/304 (16%)
Query: 324 KNKLGKGGFGTVYKGIWRNKE-------IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNL 376
K +LG+G FG V+ N +AVK + + + +++F E + +L+H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKF---------IFYD-ETNSGPGEVTLNWEKRLS 426
VK G C + ++V+EYM +G L+KF I D + GE+ L+
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS-----Q 134
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTH---H 483
++H SQ + + + +HRD+ + N ++ + ++GDFG++R + H
Sbjct: 135 MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 484 STKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVH 542
+ I +M PES + + T E+D+++FGV++ E+ G++P Q N ++
Sbjct: 195 TMLPIR----WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS----NTEVI- 245
Query: 543 WLWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLS--G 600
E +GR+L+ KE+ V+ L C P R ++K + ++L G
Sbjct: 246 ---ECITQGRVLERP------RVCPKEVYDVM---LGCWQREPQQRLNIKEIYKILHALG 293
Query: 601 EADP 604
+A P
Sbjct: 294 KATP 297
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 19/207 (9%)
Query: 325 NKLGKGGFGTVYKGIWRNK-EIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
+LG G FG V G WR + ++A+K + E S + EFI E + +L H LV+L G C
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
++ ++ EYM NG L ++ ++ L + +A++YL +
Sbjct: 69 TKQRPIFIITEYMANGCLLNYL-------REMRHRFQTQQLLEMCKDVCEAMEYLES--- 118
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHH--STKEIAGTPGYMAPESFL 501
K+ LHRD+ + N +++ + ++ DFGL+R + ++ T S + +P PE +
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLM 174
Query: 502 VGRATIETDIYAFGVLILEV-ACGRKP 527
+ + ++DI+AFGVL+ E+ + G+ P
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 47/304 (15%)
Query: 324 KNKLGKGGFGTVYKGIWRN-------KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNL 376
K +LG+G FG V+ N +AVK + E S +Q+F E + L+H+++
Sbjct: 23 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 82
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKF---------IFYDETNSGPGEVTLNWEKRLSV 427
V+ G C E L+V+EYM +G L++F + + PG + L + L+V
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG--QLLAV 140
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
+ + YL + +HRD+ + N ++ ++GDFG++R I +
Sbjct: 141 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWE 546
+ +M PES L + T E+D+++FGV++ E+ G++P Q
Sbjct: 198 MLPI-RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT------------ 244
Query: 547 LRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVLSGEAD 603
+A D G E+ C V + C P R S+K V L A
Sbjct: 245 --------EAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 296
Query: 604 -PPV 606
PPV
Sbjct: 297 APPV 300
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ +V EYM GSL F+ G L + + + + + Y+ +
Sbjct: 251 EPIY-IVGEYMSKGSLLDFL------KGETGKYLRLPQLVDMAAQIASGMAYVERMN--- 300
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 357
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 19/207 (9%)
Query: 325 NKLGKGGFGTVYKGIWRNK-EIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
+LG G FG V G WR + ++A+K + E S + EFI E + +L H LV+L G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
++ ++ EYM NG L ++ ++ L + +A++YL +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL-------REMRHRFQTQQLLEMCKDVCEAMEYLES--- 123
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHH--STKEIAGTPGYMAPESFL 501
K+ LHRD+ + N +++ + ++ DFGL+R + ++ T S + +P PE +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLM 179
Query: 502 VGRATIETDIYAFGVLILEV-ACGRKP 527
+ + ++DI+AFGVL+ E+ + G+ P
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 7 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 64
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 65 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIG-SQY 122
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 123 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 173
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 174 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 133/304 (43%), Gaps = 47/304 (15%)
Query: 324 KNKLGKGGFGTVYKGIWRN-------KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNL 376
K +LG+G FG V+ N +AVK + E S +Q+F E + L+H+++
Sbjct: 17 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 76
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKF---------IFYDETNSGPGEVTLNWEKRLSV 427
V+ G C E L+V+EYM +G L++F + + PG + L + L+V
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG--QLLAV 134
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
+ + YL + +HRD+ + N ++ ++GDFG++R I +
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWE 546
+ +M PES L + T E+D+++FGV++ E+ G++P Q + I
Sbjct: 192 MLPI-RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT----- 245
Query: 547 LRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVLSGEAD 603
+GR L E+ C V + C P R S+K V L A
Sbjct: 246 ---QGREL------------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 290
Query: 604 -PPV 606
PPV
Sbjct: 291 APPV 294
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 19/207 (9%)
Query: 325 NKLGKGGFGTVYKGIWRNK-EIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
+LG G FG V G WR + ++A+K + E S + EFI E + +L H LV+L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
++ ++ EYM NG L ++ ++ L + +A++YL +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL-------REMRHRFQTQQLLEMCKDVCEAMEYLES--- 138
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHH--STKEIAGTPGYMAPESFL 501
K+ LHRD+ + N +++ + ++ DFGL+R + ++ T S + +P PE +
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLM 194
Query: 502 VGRATIETDIYAFGVLILEV-ACGRKP 527
+ + ++DI+AFGVL+ E+ + G+ P
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 133/304 (43%), Gaps = 47/304 (15%)
Query: 324 KNKLGKGGFGTVYKGIWRN-------KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNL 376
K +LG+G FG V+ N +AVK + E S +Q+F E + L+H+++
Sbjct: 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 105
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKF---------IFYDETNSGPGEVTLNWEKRLSV 427
V+ G C E L+V+EYM +G L++F + + PG + L + L+V
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG--QLLAV 163
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
+ + YL + +HRD+ + N ++ ++GDFG++R I +
Sbjct: 164 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWE 546
+ +M PES L + T E+D+++FGV++ E+ G++P Q + I
Sbjct: 221 MLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT----- 274
Query: 547 LRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVLSGEAD 603
+GR L E+ C V + C P R S+K V L A
Sbjct: 275 ---QGREL------------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319
Query: 604 -PPV 606
PPV
Sbjct: 320 APPV 323
>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal
Free Form
Length = 257
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 117/243 (48%), Gaps = 24/243 (9%)
Query: 23 QVSSLHFNFQSFTEQNRNELSF--DNSTVAKSAIQVTYDVRGAPITNQSGRAIYKDQFQL 80
Q S+ F F +F + + F D +T A + + G P+ +GRA+Y D QL
Sbjct: 1 QSDSVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQL 60
Query: 81 WRDNKNVKATFSTTFVLNILNQTAQPGEGLAFVIAGNKDLPENSEGQWLGIVNGIT-NGT 139
W + A+F T F + P +GLAF +A D G++LG+ N T
Sbjct: 61 WDNKTESVASFYTEFTFFLKITGNGPADGLAFFLAP-PDSDVKDAGEYLGLFNKSTATQP 119
Query: 140 NQSQIVAIEFDT-------KKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKV 192
+++Q+VA+EFDT + SY H+G++VNS+ S+ ++ +G
Sbjct: 120 SKNQVVAVEFDTWTNPNFPEPSYR------HIGINVNSIVSVATKRWEDSDIFSGKIATA 173
Query: 193 QVRYDGQNITVFVANMETP-----LLSEPIDLSEYLPEKVFVGFSASTGDDTQLNC-VKS 246
++ YDG + + + P +LS +D+ + LPE V VG SASTG++ L + S
Sbjct: 174 RISYDG-SAEILTVVLSYPDGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILS 232
Query: 247 WAF 249
W F
Sbjct: 233 WRF 235
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 4 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 61
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 62 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIG-SQY 119
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 120 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 171 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 6 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIG-SQY 121
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 122 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 173 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 3 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIG-SQY 118
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 119 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 170 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 19/207 (9%)
Query: 325 NKLGKGGFGTVYKGIWRNK-EIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
+LG G FG V G WR + ++A+K + E S + EFI E + +L H LV+L G C
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
++ ++ EYM NG L ++ ++ L + +A++YL +
Sbjct: 80 TKQRPIFIITEYMANGCLLNYL-------REMRHRFQTQQLLEMCKDVCEAMEYLES--- 129
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHH--STKEIAGTPGYMAPESFL 501
K+ LHRD+ + N +++ + ++ DFGL+R + ++ T S + +P PE +
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLM 185
Query: 502 VGRATIETDIYAFGVLILEV-ACGRKP 527
+ + ++DI+AFGVL+ E+ + G+ P
Sbjct: 186 YSKFSSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia))
Complex With Y Human Blood Group Determinant
pdb|1LEC|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
pdb|1LED|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
Length = 243
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 123/230 (53%), Gaps = 15/230 (6%)
Query: 30 NFQSFTEQNRNELSF-DNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWRDNKNV 87
+F S++ +N E++F ++T A+Q+T D G P+ + +G+A Y + LW D+
Sbjct: 10 DFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLW-DSTGK 68
Query: 88 KATFSTTFVLNILNQTAQPGEGLAFVIAGNKDLPENSEGQWLGIVNGITNG-TNQSQIVA 146
A+F T+F + N A +GLAF +A D G +LG+ T +++Q+VA
Sbjct: 69 AASFYTSFTFLLKNYGAPTADGLAFFLA-PVDSSVKDYGGFLGLFRHETAADPSKNQVVA 127
Query: 147 IEFDTKKSYEQDINDN---HVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQN--I 201
+EFDT +D ND H+G+DVNS+ S+ + + + YD ++ +
Sbjct: 128 VEFDTW--INKDWNDPPYPHIGIDVNSIVSVATTRWENDDAYGSSIATAHITYDARSKIL 185
Query: 202 TVFVA--NMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
TV ++ + +LS +DL++ LP+KV +GFSA G D ++ + SW F
Sbjct: 186 TVLLSYEHGRDYILSHVVDLAKVLPQKVRIGFSAGVGYD-EVTYILSWHF 234
>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|B Chain B, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|C Chain C, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|D Chain D, Peanut Lectin Complexed With C-Lactose
pdb|1V6I|A Chain A, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|B Chain B, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|C Chain C, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|D Chain D, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6J|A Chain A, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|B Chain B, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|C Chain C, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|D Chain D, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6K|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6L|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6M|A Chain A, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|B Chain B, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|C Chain C, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|D Chain D, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|E Chain E, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|F Chain F, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|G Chain G, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|H Chain H, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6N|A Chain A, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|B Chain B, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|C Chain C, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|D Chain D, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|E Chain E, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|F Chain F, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|G Chain G, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|H Chain H, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6O|A Chain A, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|B Chain B, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|C Chain C, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|D Chain D, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|E Chain E, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|F Chain F, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|G Chain G, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|H Chain H, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
Length = 232
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 121/236 (51%), Gaps = 25/236 (10%)
Query: 26 SLHFNFQSFTEQNRNELSF--DNSTVAKSAIQVTYDVRGAPITNQSGRAIYKDQFQLWRD 83
++ FNF SF+E N ++F D + ++ IQ+T + N GR +Y ++W
Sbjct: 3 TVSFNFNSFSEGNP-AINFQGDVTVLSNGNIQLTNLNK----VNSVGRVLYAMPVRIWSS 57
Query: 84 NKNVKATFSTTFVLNILN-QTAQPGEGLAFVIAGNKDLPENSE---GQWLGIVNGITNGT 139
A+F T+F + + + P +G+ F IA PE+++ G G G+++
Sbjct: 58 ATGNVASFLTSFSFEMKDIKDYDPADGIIFFIA-----PEDTQIPAGSIGGGTLGVSDTK 112
Query: 140 NQSQIVAIEFDTKKSYE-QDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDG 198
V +EFDT + E D +HVG+DVNSV S++ VP N +G +KV V YD
Sbjct: 113 GAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPW---NSVSGAVVKVTVIYDS 169
Query: 199 QNITVFVA----NMETPLLSEPIDLSEYLPEKVFVGFSASTG-DDTQLNCVKSWAF 249
T+ VA N + +++ +DL LPE+V GFSAS Q++ ++SW+F
Sbjct: 170 STKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSF 225
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
++++ EYM GSL F+ G L + + + + + Y+ +
Sbjct: 85 EPIYIVI-EYMSKGSLLDFL------KGEMGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N + ++ A P + APE+ L GR
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EXTARQGAKFPIKWTAPEAALYGR 191
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2PEL|A Chain A, Peanut Lectin
pdb|2PEL|B Chain B, Peanut Lectin
pdb|2PEL|C Chain C, Peanut Lectin
pdb|2PEL|D Chain D, Peanut Lectin
pdb|2TEP|A Chain A, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|B Chain B, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|C Chain C, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|D Chain D, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|1CIW|A Chain A, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|B Chain B, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|C Chain C, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|D Chain D, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1QF3|A Chain A, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|B Chain B, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|C Chain C, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|D Chain D, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1CR7|A Chain A, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|B Chain B, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|C Chain C, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|D Chain D, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|E Chain E, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|F Chain F, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|G Chain G, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|H Chain H, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CQ9|A Chain A, Peanut Lectin-Triclinic Form
pdb|1CQ9|B Chain B, Peanut Lectin-Triclinic Form
pdb|1CQ9|C Chain C, Peanut Lectin-Triclinic Form
pdb|1CQ9|D Chain D, Peanut Lectin-Triclinic Form
pdb|1RIR|A Chain A, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|B Chain B, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|C Chain C, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|D Chain D, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIT|A Chain A, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|B Chain B, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|C Chain C, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|D Chain D, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|2DH1|A Chain A, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|B Chain B, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|C Chain C, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|D Chain D, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DV9|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DVA|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVB|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVD|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVF|A Chain A, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|B Chain B, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|C Chain C, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|D Chain D, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVG|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
Length = 236
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 121/236 (51%), Gaps = 25/236 (10%)
Query: 26 SLHFNFQSFTEQNRNELSF--DNSTVAKSAIQVTYDVRGAPITNQSGRAIYKDQFQLWRD 83
++ FNF SF+E N ++F D + ++ IQ+T + N GR +Y ++W
Sbjct: 3 TVSFNFNSFSEGNP-AINFQGDVTVLSNGNIQLTNLNK----VNSVGRVLYAMPVRIWSS 57
Query: 84 NKNVKATFSTTFVLNILN-QTAQPGEGLAFVIAGNKDLPENSE---GQWLGIVNGITNGT 139
A+F T+F + + + P +G+ F IA PE+++ G G G+++
Sbjct: 58 ATGNVASFLTSFSFEMKDIKDYDPADGIIFFIA-----PEDTQIPAGSIGGGTLGVSDTK 112
Query: 140 NQSQIVAIEFDTKKSYE-QDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDG 198
V +EFDT + E D +HVG+DVNSV S++ VP N +G +KV V YD
Sbjct: 113 GAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPW---NSVSGAVVKVTVIYDS 169
Query: 199 QNITVFVA----NMETPLLSEPIDLSEYLPEKVFVGFSASTG-DDTQLNCVKSWAF 249
T+ VA N + +++ +DL LPE+V GFSAS Q++ ++SW+F
Sbjct: 170 STKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSF 225
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+V EYM GSL F+ G L + + + + + Y+ +
Sbjct: 75 -EPIXIVTEYMSKGSLLDFL------KGETGKYLRLPQLVDMAAQIASGMAYVERMN--- 124
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N + ++ A P + APE+ L GR
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EXTARQGAKFPIKWTAPEAALYGR 181
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 182 FTIKSDVWSFGILLTELTTKGRVP 205
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 9 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 66
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 67 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIG-SQY 124
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 125 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 175
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 176 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 4 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 61
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 62 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGXLLDYVREHKDNIG-SQY 119
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 120 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 171 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin
pdb|1UZY|B Chain B, Erythrina Crystagalli Lectin
pdb|1UZZ|A Chain A, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|B Chain B, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|C Chain C, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|D Chain D, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1V00|A Chain A, Erythrina Cristagalli Lectin
pdb|1V00|B Chain B, Erythrina Cristagalli Lectin
pdb|1V00|C Chain C, Erythrina Cristagalli Lectin
pdb|1V00|D Chain D, Erythrina Cristagalli Lectin
Length = 242
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 19/242 (7%)
Query: 24 VSSLHFNFQSFTEQNRNELSFDNSTVAKSA--IQVT-YDVRGAPITNQSGRAIYKDQFQL 80
V ++ F+F F E N+L+ + + + +Q+T + G P + +GR +Y +
Sbjct: 1 VETISFSFSEF-EPGNNDLTLQGAAIITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHI 59
Query: 81 WRDNKNVKATFSTTFVLNILNQTAQ--PGEGLAFVIAGNKDLPENSEGQWLGIVNGITNG 138
W A+F T F +I + P +GL F + K P G +LG+ N +
Sbjct: 60 WDMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYG-YLGVFNN-SKQ 117
Query: 139 TNQSQIVAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDG 198
N Q +A+EFDT + H+G+DVNS+ SI+ P L NG V ++YD
Sbjct: 118 DNSYQTLAVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQPF---QLDNGQVANVVIKYDA 174
Query: 199 QN-----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTG---DDTQLNCVKSWAFD 250
+ + V+ ++ ++E +D+ + LPE V VG S +TG D + + V SW+F
Sbjct: 175 SSKILLAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFH 234
Query: 251 GS 252
S
Sbjct: 235 AS 236
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 6 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIG-SQY 121
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 122 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 173 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 3 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIG-SQY 118
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 119 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 170 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + +RH LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
++ V EYM GSL F+ G L + + + + + Y+ +
Sbjct: 85 EPIYI-VTEYMSKGSLLDFL------KGEMGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 191
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 17/206 (8%)
Query: 325 NKLGKGGFGTVYKGIWR-NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
+LG G FG V+ G W N ++A+K + + + F+ E + L+H LV+L
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E ++ V EYM GSL F+ G G K +++ +Q +
Sbjct: 74 SEEPIYI-VTEYMNKGSLLDFL-----KDGEGRAL----KLPNLVDMAAQVAAGMAYIER 123
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLV 502
+HRD++S+NI++ + ++ DFGLAR I++N + ++ A P + APE+ L
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGLARLIEDN---EXTARQGAKFPIKWTAPEAALY 180
Query: 503 GRATIETDIYAFGVLILE-VACGRKP 527
GR TI++D+++FG+L+ E V GR P
Sbjct: 181 GRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 6 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIG-SQY 121
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 122 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 173 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ +V EYM GSL F+ G L + + + + + Y+ +
Sbjct: 85 EPIY-IVTEYMSKGSLLDFL------KGEMGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD+ ++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 191
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ +V EYM G L F+ G L + + + + + Y+ +
Sbjct: 85 EPIY-IVMEYMSKGCLLDFL------KGEMGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 191
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 10 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIG-SQY 125
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 126 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 177 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 13 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 70
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 71 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIG-SQY 128
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 129 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 179
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 180 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 6 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIG-SQY 121
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 122 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 173 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ +V EYM GSL F+ GE T + + ++ ++Q +
Sbjct: 82 EPIY-IVTEYMNKGSLLDFL--------KGE-TGKYLRLPQLVDMSAQIASGMAYVERMN 131
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N + ++ A P + APE+ L GR
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EWTARQGAKFPIKWTAPEAALYGR 188
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVP 212
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 139/290 (47%), Gaps = 42/290 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLR 372
N + +G G FG V G + KEI+V +V T +Q +++F+ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 104
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N+++L G + ++V EYM NGSLD F+ + + + ++ G +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIA 157
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ YL S+ +HRD+ + NI+++S ++ DFGLAR ++++ + ++T+
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
+ +PE+ + T +D++++G+++ EV + G +P WE+ +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD 258
Query: 552 RILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
++ A D G M+C + L L C + + RP + ++ +L
Sbjct: 259 -VIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|B Chain B, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|C Chain C, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|D Chain D, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|E Chain E, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|F Chain F, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
Length = 239
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 113/241 (46%), Gaps = 17/241 (7%)
Query: 24 VSSLHFNFQSFTEQNRNELSFDNSTVAKSAI-QVT-YDVRGAPITNQSGRAIYKDQFQLW 81
V ++ F+F F N N S + +S + Q+T + G P + +GR +Y +W
Sbjct: 1 VETISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIW 60
Query: 82 RDNKNVKATFSTTFVLNILNQTAQP--GEGLAFVIAGNKDLPENSEGQWLGIVNGITNGT 139
A+F T F +I +P +GL F + K P G +LGI N +
Sbjct: 61 DMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYG-YLGIFNN-SKQD 118
Query: 140 NQSQIVAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQ 199
N Q + +EFDT + H+G+DVNS+ SI+ P L NG V ++YD
Sbjct: 119 NSYQTLGVEFDTFSNQWDPPQVPHIGIDVNSIRSIKTQPF---QLDNGQVANVVIKYDAS 175
Query: 200 N-----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTG---DDTQLNCVKSWAFDG 251
+ + V+ ++ ++E +D+ + LPE V VG S +TG D + + V SW+F
Sbjct: 176 SKLLHAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQA 235
Query: 252 S 252
S
Sbjct: 236 S 236
>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
pdb|1HQL|B Chain B, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
Length = 257
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 24/240 (10%)
Query: 26 SLHFNFQSFTEQNRNELSF--DNSTVAKSAIQVTYDVRGAPITNQSGRAIYKDQFQLWRD 83
S+ F F +F + + F D +T A + + G P+ +GRA+Y D QLW +
Sbjct: 4 SVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDN 63
Query: 84 NKNVKATFSTTFVLNILNQTAQPGEGLAFVIAGNKDLPENSEGQWLGIVNGIT-NGTNQS 142
A+F T F + P +GLAF +A D G++LG+ N T +++
Sbjct: 64 KTESVASFYTEFTFFLKITGNGPADGLAFFLAP-PDSDVKDAGEYLGLFNKSTATQPSKN 122
Query: 143 QIVAIEFDT-------KKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVR 195
Q+VA+EFDT + SY H+G++VNS+ S+ ++ +G ++
Sbjct: 123 QVVAVEFDTWTNPNFPEPSYR------HIGINVNSIVSVATKRWEDSDIFSGKIATARIS 176
Query: 196 YDGQNITVFVANMETP-----LLSEPIDLSEYLPEKVFVGFSASTGDDTQLNC-VKSWAF 249
YDG + + + P +LS +D+ + LPE V VG SASTG++ L + SW F
Sbjct: 177 YDG-SAEILTVVLSYPDGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRF 235
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 3 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIG-SQY 118
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 119 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 170 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 3 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGXLLDYVREHKDNIG-SQY 118
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 119 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 170 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 17/218 (7%)
Query: 325 NKLGKGGFGTVYKGIWRNKE-IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
++G G FG V+ G W NK+ +A+K + E + +++FI E + L H LV+L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E+ LV+E+M +G L ++ T G E L + + + YL S
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL---RTQRG----LFAAETLLGMCLDVCEGMAYLEEAS- 123
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
V+HRD+ + N ++ ++ DFG+ R + ++ T + + + +PE F
Sbjct: 124 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFS 179
Query: 504 RATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIV 541
R + ++D+++FGVL+ EV G +N N+ +V
Sbjct: 180 RYSSKSDVWSFGVLMWEVF---SEGKIPYENRSNSEVV 214
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ +V EYM G L F+ G L + + + + + Y+ +
Sbjct: 85 EPIY-IVTEYMSKGCLLDFL------KGEMGKYLRLPQLVDMAAQIASGMAYVERMN--- 134
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGLAR I++N ++ ++ A P + APE+ L GR
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGR 191
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 112/209 (53%), Gaps = 19/209 (9%)
Query: 327 LGKGGFGTVYKGIW-----RNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+G G FG V G R +A+K +V T +Q +++F+ E + +G H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIHL 88
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G + ++V EYM NGSLD F+ + N G V + + ++ G S + YL
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFL---KKNDGQFTVI----QLVGMLRGISAGMKYL- 140
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
S+ +HRD+ + NI+++S ++ DFGL+R ++++ + ++T+ + APE+
Sbjct: 141 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA 198
Query: 500 FLVGRATIETDIYAFGVLILEVAC-GRKP 527
+ T +D++++G+++ EV G +P
Sbjct: 199 IAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 15/204 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
KLG+G FG V+ G W + + + F+ E + LRH LV+L E
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ +V EYM GSL F+ G L + + + + + Y+ +
Sbjct: 252 EPIY-IVTEYMSKGSLLDFL------KGEMGKYLRLPQLVDMAAQIASGMAYVERMN--- 301
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD++++NI++ ++ DFGL R I++N ++ ++ A P + APE+ L GR
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLIEDN---EYTARQGAKFPIKWTAPEAALYGR 358
Query: 505 ATIETDIYAFGVLILEVAC-GRKP 527
TI++D+++FG+L+ E+ GR P
Sbjct: 359 FTIKSDVWSFGILLTELTTKGRVP 382
>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N-
Acetylgalactosamine
pdb|3N36|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Galactose
pdb|3N3H|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Citrate
Length = 242
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 113/241 (46%), Gaps = 17/241 (7%)
Query: 24 VSSLHFNFQSFTEQNRNELSFDNSTVAKSAI-QVT-YDVRGAPITNQSGRAIYKDQFQLW 81
V ++ F+F F N N S + +S + Q+T + G P + +GR +Y +W
Sbjct: 1 VETISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIW 60
Query: 82 RDNKNVKATFSTTFVLNILNQTAQP--GEGLAFVIAGNKDLPENSEGQWLGIVNGITNGT 139
A+F T F +I +P +GL F + K P G +LGI N +
Sbjct: 61 DMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGGG-YLGIFNN-SKQD 118
Query: 140 NQSQIVAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQ 199
N Q + +EFDT + H+G+DVNS+ SI+ P L NG V ++YD
Sbjct: 119 NSYQTLGVEFDTFSNQWDPPQVPHIGIDVNSIRSIKTQPF---QLDNGQVANVVIKYDAS 175
Query: 200 N-----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTG---DDTQLNCVKSWAFDG 251
+ + V+ ++ ++E +D+ + LPE V VG S +TG D + + V SW+F
Sbjct: 176 SKILHAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQA 235
Query: 252 S 252
S
Sbjct: 236 S 236
>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide
pdb|1G9F|A Chain A, Crystal Structure Of The Soybean Agglutinin In A Complex
With A Biantennary Blood Group Antigen Analog
pdb|1SBD|A Chain A, Soybean Agglutinin Complexed With 2,4-pentasaccharide
pdb|1SBE|A Chain A, Soybean Agglutinin From Glycine Max
pdb|1SBF|A Chain A, Soybean Agglutinin
Length = 253
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 121/235 (51%), Gaps = 20/235 (8%)
Query: 26 SLHFNFQSFTEQNRNELSFDNSTVAKSA-IQVT-YDVRGAPITNQSGRAIYKDQFQLWRD 83
++ F++ F + N + ++ V S +Q+ D G P + GRA+Y +W
Sbjct: 3 TVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDK 62
Query: 84 NKNVKATFSTTFVLNILN-QTAQPGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGTNQS 142
A+F+ +F T + +GLAF +A P+ G +LG+ N +G
Sbjct: 63 ETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAG-YLGLFNENESG---D 118
Query: 143 QIVAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQNIT 202
Q+VA+EFDT ++ D + H+G++VNS+ SI+ T +LAN KV + YD +
Sbjct: 119 QVVAVEFDTFRN-SWDPPNPHIGINVNSIRSIKT---TSWDLANNKVAKVLITYDAST-S 173
Query: 203 VFVANMETP------LLSEPIDLSEYLPEKVFVGFSASTGDDT--QLNCVKSWAF 249
+ VA++ P +LS+ +DL LPE V +GFSA+TG D + + V SW+F
Sbjct: 174 LLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSF 228
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 124/236 (52%), Gaps = 24/236 (10%)
Query: 301 GTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-T 353
G+ AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E T
Sbjct: 1 GSGEAPNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 58
Query: 354 SRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSG 413
S + +E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIG 117
Query: 414 PGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR 473
+ LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFG A+
Sbjct: 118 -SQYLLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
Query: 474 TIQENLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
+ K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 168 LLGAEEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 124/236 (52%), Gaps = 24/236 (10%)
Query: 301 GTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-T 353
G+ AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E T
Sbjct: 1 GSGEAPNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 58
Query: 354 SRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSG 413
S + +E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIG 117
Query: 414 PGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR 473
+ LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFG A+
Sbjct: 118 -SQYLLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
Query: 474 TIQENLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
+ K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 168 LLGAEEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked
Carbohydrate In Complex With Lactose
Length = 239
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 113/241 (46%), Gaps = 17/241 (7%)
Query: 24 VSSLHFNFQSFTEQNRNELSFDNSTVAKSAI-QVT-YDVRGAPITNQSGRAIYKDQFQLW 81
V ++ F+F F N N S + +S + Q+T + G P + +GR +Y +W
Sbjct: 1 VETISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIW 60
Query: 82 RDNKNVKATFSTTFVLNILNQTAQ--PGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGT 139
A+F T F +I + P +GL F + K P G +LGI N +
Sbjct: 61 DMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYG-YLGIFNQ-SKQD 118
Query: 140 NQSQIVAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQ 199
N Q + +EFDT + H+G+DVNS+ SI+ P L NG V ++YD
Sbjct: 119 NSYQTLGVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQPF---QLDNGQVANVVIKYDAS 175
Query: 200 N-----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTG---DDTQLNCVKSWAFDG 251
+ + V+ ++ ++E +D+ + LPE V VG S +TG D + + V SW+F
Sbjct: 176 SKLLHAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQA 235
Query: 252 S 252
S
Sbjct: 236 S 236
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 17/218 (7%)
Query: 325 NKLGKGGFGTVYKGIWRNKE-IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
++G G FG V+ G W NK+ +A+K + E S + +FI E + L H LV+L G C
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E+ LV+E+M +G L ++ T G E L + + + YL E
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYL---RTQRG----LFAAETLLGMCLDVCEGMAYLE---E 141
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
V+HRD+ + N ++ ++ DFG+ R + ++ T + + + +PE F
Sbjct: 142 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFS 199
Query: 504 RATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIV 541
R + ++D+++FGVL+ EV G +N N+ +V
Sbjct: 200 RYSSKSDVWSFGVLMWEVF---SEGKIPYENRSNSEVV 234
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 124/236 (52%), Gaps = 24/236 (10%)
Query: 301 GTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-T 353
G+ AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E T
Sbjct: 1 GSGEAPNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 58
Query: 354 SRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSG 413
S + +E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G
Sbjct: 59 SPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIG 117
Query: 414 PGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR 473
+ LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFG A+
Sbjct: 118 -SQYLLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
Query: 474 TIQENLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
+ K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 168 LLGAEEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 17/218 (7%)
Query: 325 NKLGKGGFGTVYKGIWRNKE-IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
++G G FG V+ G W NK+ +A+K + E + +++FI E + L H LV+L G C
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E+ LV+E+M +G L ++ T G E L + + + YL E
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYL---RTQRG----LFAAETLLGMCLDVCEGMAYLE---E 119
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
V+HRD+ + N ++ ++ DFG+ R + ++ T + + + +PE F
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFS 177
Query: 504 RATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIV 541
R + ++D+++FGVL+ EV G +N N+ +V
Sbjct: 178 RYSSKSDVWSFGVLMWEVF---SEGKIPYENRSNSEVV 212
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 17/218 (7%)
Query: 325 NKLGKGGFGTVYKGIWRNKE-IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
++G G FG V+ G W NK+ +A+K + E + +++FI E + L H LV+L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E+ LV+E+M +G L ++ T G E L + + + YL E
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL---RTQRG----LFAAETLLGMCLDVCEGMAYLE---E 121
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
V+HRD+ + N ++ ++ DFG+ R + ++ T + + + +PE F
Sbjct: 122 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFS 179
Query: 504 RATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIV 541
R + ++D+++FGVL+ EV G +N N+ +V
Sbjct: 180 RYSSKSDVWSFGVLMWEVF---SEGKIPYENRSNSEVV 214
>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With 2'-Alpha-L-Fucosyllactose
pdb|1GZC|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With Lactose
Length = 239
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 114/241 (47%), Gaps = 17/241 (7%)
Query: 24 VSSLHFNFQSFTEQNRNELSFDNSTVAKSAI-QVT-YDVRGAPITNQSGRAIYKDQFQLW 81
V ++ F+F F N N + + +S + Q+T + G P + +GR +Y +W
Sbjct: 1 VETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMW 60
Query: 82 RDNKNVKATFSTTFVLNILNQTAQ--PGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGT 139
A+F T F +I + P +GL F + K P G +LG+ N +
Sbjct: 61 DSTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYG-YLGVFNN-SKQD 118
Query: 140 NQSQIVAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQ 199
N Q +A+EFDT + H+G+DVNS+ SI+ P L NG V ++YD
Sbjct: 119 NSYQTLAVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQPF---QLDNGQVANVVIKYDAP 175
Query: 200 N-----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTG---DDTQLNCVKSWAFDG 251
+ + V+ ++ ++E +D+ + LP+ V VG S +TG D + + V SW+F
Sbjct: 176 SKILHVVLVYPSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQA 235
Query: 252 S 252
S
Sbjct: 236 S 236
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 139/290 (47%), Gaps = 42/290 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLR 372
N + +G G FG V G + KEI+V +V T +Q +++F+ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 104
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N+++L G + ++V EYM NGSLD F+ + + + ++ G +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIA 157
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ YL S+ +HRD+ + NI+++S ++ DFGL+R ++++ + ++T+
Sbjct: 158 SGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
+ +PE+ + T +D++++G+++ EV + G +P WE+ +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD 258
Query: 552 RILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
++ A D G M+C + L L C + + RP + ++ +L
Sbjct: 259 -VIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 17/218 (7%)
Query: 325 NKLGKGGFGTVYKGIWRNKE-IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
++G G FG V+ G W NK+ +A+K + E + +++FI E + L H LV+L G C
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E+ LV+E+M +G L ++ T G E L + + + YL E
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYL---RTQRG----LFAAETLLGMCLDVCEGMAYLE---E 124
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
V+HRD+ + N ++ ++ DFG+ R + ++ T + + + +PE F
Sbjct: 125 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFS 182
Query: 504 RATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIV 541
R + ++D+++FGVL+ EV G +N N+ +V
Sbjct: 183 RYSSKSDVWSFGVLMWEVF---SEGKIPYENRSNSEVV 217
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 109/217 (50%), Gaps = 31/217 (14%)
Query: 321 FNPKNKLGKGGFGTVY--KGIWRNKEIAVKRVSETSRQGK---QEFIAEVTTIGSLRHRN 375
F+ ++G G FG VY + + ++ +A+K++S + +Q Q+ I EV + LRH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 376 LVKLIGWCYER-HDFLLVYEYMPNGSLDKFIFYDETNSGP-GEVTLNWEKRLSVIHGTSQ 433
++ G CY R H LV EY + D E + P EV + +V HG Q
Sbjct: 77 TIQYRG-CYLREHTAWLVMEYCLGSASDLL----EVHKKPLQEVEIA-----AVTHGALQ 126
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L YLH+ + ++HRD+K+ NI+L +LGDFG A + GTP
Sbjct: 127 GLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA-------PANXFVGTPY 176
Query: 494 YMAPESFLV---GRATIETDIYAFGVLILEVACGRKP 527
+MAPE L G+ + D+++ G+ +E+A RKP
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKP 212
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 139/290 (47%), Gaps = 42/290 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLR 372
N + +G G FG V G + KEI+V +V T +Q +++F+ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 104
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N+++L G + ++V EYM NGSLD F+ + + + ++ G +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIA 157
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ YL S+ +HRD+ + NI+++S ++ DFGL+R ++++ + ++T+
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
+ +PE+ + T +D++++G+++ EV + G +P WE+ +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD 258
Query: 552 RILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
++ A D G M+C + L L C + + RP + ++ +L
Sbjct: 259 -VIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 139/290 (47%), Gaps = 42/290 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLR 372
N + +G G FG V G + KEI+V +V T +Q +++F+ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 104
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N+++L G + ++V EYM NGSLD F+ + + + ++ G +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIA 157
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ YL S+ +HRD+ + NI+++S ++ DFGL+R ++++ + ++T+
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
+ +PE+ + T +D++++G+++ EV + G +P WE+ +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD 258
Query: 552 RILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
++ A D G M+C + L L C + + RP + ++ +L
Sbjct: 259 -VIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 139/290 (47%), Gaps = 42/290 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLR 372
N + +G G FG V G + KEI+V +V T +Q +++F+ E + +G
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 75
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N+++L G + ++V EYM NGSLD F+ + + + ++ G +
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIA 128
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ YL S+ +HRD+ + NI+++S ++ DFGL+R ++++ + ++T+
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
+ +PE+ + T +D++++G+++ EV + G +P WE+ +
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD 229
Query: 552 RILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
++ A D G M+C + L L C + + RP + ++ +L
Sbjct: 230 -VIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 139/290 (47%), Gaps = 42/290 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLR 372
N + +G G FG V G + KEI+V +V T +Q +++F+ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 104
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N+++L G + ++V EYM NGSLD F+ + + + ++ G +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIA 157
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ YL S+ +HRD+ + NI+++S ++ DFGL+R ++++ + ++T+
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
+ +PE+ + T +D++++G+++ EV + G +P WE+ +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD 258
Query: 552 RILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
++ A D G M+C + L L C + + RP + ++ +L
Sbjct: 259 -VIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 139/290 (47%), Gaps = 42/290 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLR 372
N + +G G FG V G + KEI+V +V T +Q +++F+ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 104
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N+++L G + ++V EYM NGSLD F+ + + + ++ G +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIA 157
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ YL S+ +HRD+ + NI+++S ++ DFGL+R ++++ + ++T+
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
+ +PE+ + T +D++++G+++ EV + G +P WE+ +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD 258
Query: 552 RILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
++ A D G M+C + L L C + + RP + ++ +L
Sbjct: 259 -VIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 139/290 (47%), Gaps = 42/290 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLR 372
N + +G G FG V G + KEI+V +V T +Q +++F+ E + +G
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 92
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N+++L G + ++V EYM NGSLD F+ + + + ++ G +
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIA 145
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ YL S+ +HRD+ + NI+++S ++ DFGL+R ++++ + ++T+
Sbjct: 146 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 202
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
+ +PE+ + T +D++++G+++ EV + G +P WE+ +
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD 246
Query: 552 RILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
++ A D G M+C + L L C + + RP + ++ +L
Sbjct: 247 -VIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 139/290 (47%), Gaps = 42/290 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLR 372
N + +G G FG V G + KEI+V +V T +Q +++F+ E + +G
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 102
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N+++L G + ++V EYM NGSLD F+ + + + ++ G +
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIA 155
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ YL S+ +HRD+ + NI+++S ++ DFGL+R ++++ + ++T+
Sbjct: 156 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
+ +PE+ + T +D++++G+++ EV + G +P WE+ +
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD 256
Query: 552 RILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
++ A D G M+C + L L C + + RP + ++ +L
Sbjct: 257 -VIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 29/216 (13%)
Query: 321 FNPKNKLGKGGFGTVY--KGIWRNKEIAVKRVSETSRQGK---QEFIAEVTTIGSLRHRN 375
F+ ++G G FG VY + + ++ +A+K++S + +Q Q+ I EV + LRH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 376 LVKLIGWCYER-HDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
++ G CY R H LV EY + D E + P L + +V HG Q
Sbjct: 116 TIQYRG-CYLREHTAWLVMEYCLGSASDLL----EVHKKP----LQEVEIAAVTHGALQG 166
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
L YLH+ + ++HRD+K+ NI+L +LGDFG A + GTP +
Sbjct: 167 LAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA-------PANXFVGTPYW 216
Query: 495 MAPESFLV---GRATIETDIYAFGVLILEVACGRKP 527
MAPE L G+ + D+++ G+ +E+A RKP
Sbjct: 217 MAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKP 251
>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Actylgalactosamine
pdb|1AX1|A Chain A, Erythrina Corallodendron Lectin In Complex With Lactose
pdb|1AX2|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Acetyllactosamine
pdb|1AXY|A Chain A, Erythrina Corallodendron Lectin
pdb|1AXZ|A Chain A, Erythrina Corallodendron Lectin In Complex With
D-Galactose
Length = 239
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 17/241 (7%)
Query: 24 VSSLHFNFQSFTEQNRNELSFDNSTVAKSAI-QVT-YDVRGAPITNQSGRAIYKDQFQLW 81
V ++ F+F F N N + + +S + Q+T + G P + +GR +Y +W
Sbjct: 1 VETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIW 60
Query: 82 RDNKNVKATFSTTFVLNILNQTAQ--PGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGT 139
A+F T F +I + P +GL F + K P G +LGI N +
Sbjct: 61 DMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYG-YLGIFNN-SKQD 118
Query: 140 NQSQIVAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQ 199
N Q + +EFDT + H+G+DVNS+ SI+ P L NG V ++YD
Sbjct: 119 NSYQTLGVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQPF---QLDNGQVANVVIKYDAS 175
Query: 200 N-----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTG---DDTQLNCVKSWAFDG 251
+ + V+ ++ ++E +D+ + LPE V VG S +TG D + + V SW+F
Sbjct: 176 SKILHAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQA 235
Query: 252 S 252
S
Sbjct: 236 S 236
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 122/232 (52%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F L G FGTVYKG+W + +A+K + E TS +
Sbjct: 10 APNQALLRILKET--EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIG-SQY 125
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 126 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 177 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
pdb|1DBN|B Chain B, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
Length = 239
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 121/239 (50%), Gaps = 23/239 (9%)
Query: 27 LHFNFQSFTEQNRNELSF--DNSTVAKSAIQVTYDVRGAPITNQSGRAIYKDQFQLWRDN 84
L F +F N +L F + S + +Q+T G P GRA+Y ++W +
Sbjct: 4 LSFTINNFVP-NEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNT 62
Query: 85 KNVKATFSTTFVLNILNQTAQP---GEGLAFVIAG-NKDLPENSEGQWLGIVNGITNGTN 140
A+FST+F + + P +GLAF +A + +P S ++LG+ N + +
Sbjct: 63 TGSVASFSTSFTFVV--KAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNS-DS 119
Query: 141 QSQIVAIEFDT--KKSYEQ-DINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYD 197
+QIVA+EFDT SY+ D N H+G+DVN + SI+ V + + NG + Y
Sbjct: 120 SNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTV---QWDWINGGVAFATITYL 176
Query: 198 GQNIT-----VFVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNC--VKSWAF 249
N T V+ +N T ++ +DL E LPE V VGFSA+TG T++ V SW+F
Sbjct: 177 APNKTLIASLVYPSNQTTFSVAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWSF 235
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 132/274 (48%), Gaps = 34/274 (12%)
Query: 325 NKLGKGGFGTVYKGIWRNK-EIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
+LG G FG V G W+ + ++AVK + E S + EF E T+ L H LVK G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
+ + +V EY+ NG L ++ + G G L + L + + + + +L +
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYL----RSHGKG---LEPSQLLEMCYDVCEGMAFLES--- 122
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ +HRD+ + N ++D + ++ DFG+ R + ++ + S+ + APE F
Sbjct: 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD--QYVSSVGTKFPVKWSAPEVFHYF 180
Query: 504 RATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNS-IVHWLWELRRKGRILDAADSRL 561
+ + ++D++AFG+L+ EV + G+ P + Y NS +V + + R R A+D+
Sbjct: 181 KYSSKSDVWAFGILMWEVFSLGKMP-----YDLYTNSEVVLKVSQGHRLYRPHLASDT-- 233
Query: 562 GGEFSEKEMECVLILGLACCHPNPHLRPSMKTVL 595
+ + +C H P RP+ + +L
Sbjct: 234 -----------IYQIMYSCWHELPEKRPTFQQLL 256
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 138/290 (47%), Gaps = 42/290 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLR 372
N + +G G FG V G + KEI+V +V T +Q +++F+ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 104
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N+++L G + ++V EYM NGSLD F+ + + + ++ G +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIA 157
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ YL S+ +HRD+ + NI+++S ++ DFGL R ++++ + ++T+
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
+ +PE+ + T +D++++G+++ EV + G +P WE+ +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD 258
Query: 552 RILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
++ A D G M+C + L L C + + RP + ++ +L
Sbjct: 259 -VIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 38/284 (13%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + YL
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKYL- 167
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI--QENLKTHHSTKEIAGTP-GYMA 496
+ K+ +HRD+ + N MLD +F ++ DFGLAR + +E H+ T A P +MA
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG--AKLPVKWMA 223
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDA 556
ES + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR------- 273
Query: 557 ADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 274 ---LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 311
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 127/286 (44%), Gaps = 33/286 (11%)
Query: 319 GNFNPKNKLGKGGFGTVYKG--IWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLRH 373
NF + K+G+G F VY+ + +A+K+V + + + I E+ + L H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGT 431
N++K E ++ +V E G L + I F + P + +L
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC----- 146
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGT 491
AL+++H+ +RV+HRDIK +N+ + + +LGD GL R HS + GT
Sbjct: 147 -SALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS---LVGT 199
Query: 492 PGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
P YM+PE ++DI++ G L+ E+A + P + N L+ L +K
Sbjct: 200 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---------LYSLCKKI 250
Query: 552 RILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQV 597
D L + +E+ ++ + C +P+P RP + V V
Sbjct: 251 EQCDYPP--LPSDHYSEELRQLVNM---CINPDPEKRPDVTYVYDV 291
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 122/232 (52%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 7 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 64
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 65 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIG-SQY 122
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFG A+ +
Sbjct: 123 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 173
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 174 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 136/282 (48%), Gaps = 34/282 (12%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKYL- 148
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPE 498
+ K+ +HRD+ + N MLD +F ++ DFGLAR + + K A P +MA E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 499 SFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAAD 558
S + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR--------- 254
Query: 559 SRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 255 -LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 292
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 122/232 (52%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F L G FGTVYKG+W + +A+K + E TS +
Sbjct: 10 APNQALLRILKET--EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIG-SQY 125
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 126 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 177 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 122/232 (52%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F L G FGTVYKG+W + +A+K + E TS +
Sbjct: 3 APNQALLRILKET--EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIG-SQY 118
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 119 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 170 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 35/279 (12%)
Query: 321 FNPKNKLGKGGFGTVYKGI-WRNKEIAVKRVSETSRQGKQEFIA--EVTTIGSLRHRNLV 377
F +++GKG FG VYKGI KE+ ++ + + E+T + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ G + ++ EY+ GS D GP E T +++ + LDY
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSA-----LDLLKPGPLEETYI----ATILREILKGLDY 131
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH+ +R +HRDIK++N++L + + +L DFG+A + + T GTP +MAP
Sbjct: 132 LHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD---TQIKRNXFVGTPFWMAP 185
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAA 557
E + DI++ G+ +E+A G P NS +H +R I +
Sbjct: 186 EVIKQSAYDFKADIWSLGITAIELAKGEPP----------NSDLH---PMRVLFLIPKNS 232
Query: 558 DSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQ 596
L G+ S+ E V AC + +P RP+ K +L+
Sbjct: 233 PPTLEGQHSKPFKEFV----EACLNKDPRFRPTAKELLK 267
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 122/232 (52%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+ + E TS +
Sbjct: 37 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKA 94
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 95 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIG-SQY 152
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ +
Sbjct: 153 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 203
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 204 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus
pdb|1QNW|B Chain B, Lectin Ii From Ulex Europaeus
pdb|1QNW|C Chain C, Lectin Ii From Ulex Europaeus
pdb|1QNW|D Chain D, Lectin Ii From Ulex Europaeus
pdb|1QOO|A Chain A, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|B Chain B, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|C Chain C, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|D Chain D, Lectin Uea-Ii Complexed With Nag
pdb|1QOT|A Chain A, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|B Chain B, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|C Chain C, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|D Chain D, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOS|A Chain A, Lectin Uea-Ii Complexed With Chitobiose
pdb|1QOS|B Chain B, Lectin Uea-Ii Complexed With Chitobiose
pdb|1DZQ|A Chain A, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|B Chain B, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|C Chain C, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|D Chain D, Lectin Uea-Ii Complexed With Galactose
Length = 242
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 18/235 (7%)
Query: 27 LHFNFQSFTEQNRNELSFDNSTVAKSAI-QVTYDVRGAPITNQSGRAIYKDQFQLWRDNK 85
L FNF F +N + +++V+ + + QVT + P T GRA+Y Q+W
Sbjct: 6 LSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSK--PTTTSIGRALYAAPIQIWDSIT 63
Query: 86 NVKATFSTTFVLNILNQTAQPGEGLAFVIA-GNKDLPENSEGQWLGIVNGITNGTNQSQI 144
A+F+T+F + + +GLAF +A N +P S G+ + ++ + +QI
Sbjct: 64 GKVASFATSFSFVVKADKSDGVDGLAFFLAPANSQIPSGSSAGMFGLFS-SSDSKSSNQI 122
Query: 145 VAIEFDT--KKSYEQ-DINDNHVGLDVNSVYSIRQVPLTRVNLANG--TDIKVQVRYDGQ 199
+A+EFDT K+Y D + H+G+DVNS+ SI+ V + + NG D+ + R +
Sbjct: 123 IAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTV---KWDWRNGEVADVVITYRAPTK 179
Query: 200 NITV---FVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNC--VKSWAF 249
++TV + ++ + +++ +DL LPE V VGFS G+ + V SW F
Sbjct: 180 SLTVCLSYPSDGTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYF 234
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 38/284 (13%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + YL
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKYL- 168
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI--QENLKTHHSTKEIAGTP-GYMA 496
+ K+ +HRD+ + N MLD +F ++ DFGLAR + +E H+ T A P +MA
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG--AKLPVKWMA 224
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDA 556
ES + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR------- 274
Query: 557 ADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 275 ---LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 312
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 38/284 (13%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKYL- 149
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI--QENLKTHHSTKEIAGTP-GYMA 496
+ K+ +HRD+ + N MLD +F ++ DFGLAR + +E H+ T A P +MA
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG--AKLPVKWMA 205
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDA 556
ES + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR------- 255
Query: 557 ADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 256 ---LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 293
>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
pdb|1FYU|B Chain B, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
Length = 255
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 17/241 (7%)
Query: 24 VSSLHFNFQSFTEQNRNELSFDNSTVAKSAI-QVT-YDVRGAPITNQSGRAIYKDQFQLW 81
V ++ F+F F N N + + +S + Q+T + G P + +GR +Y +W
Sbjct: 1 VETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIW 60
Query: 82 RDNKNVKATFSTTFVLNILNQTAQ--PGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGT 139
A+F T F +I + P +GL F + K P G +LGI N +
Sbjct: 61 DMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYG-YLGIFNN-SKQD 118
Query: 140 NQSQIVAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQ 199
N Q + +EFDT + H+G+DVNS+ SI+ P L NG V ++YD
Sbjct: 119 NSYQTLGVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQPF---QLDNGQVANVVIKYDAS 175
Query: 200 N-----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTG---DDTQLNCVKSWAFDG 251
+ + V+ ++ ++E +D+ + LPE V VG S +TG D + + V SW+F
Sbjct: 176 SKILHAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQA 235
Query: 252 S 252
S
Sbjct: 236 S 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 38/284 (13%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + YL
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKYL- 141
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI--QENLKTHHSTKEIAGTP-GYMA 496
+ K+ +HRD+ + N MLD +F ++ DFGLAR + +E H+ T A P +MA
Sbjct: 142 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG--AKLPVKWMA 197
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDA 556
ES + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR------- 247
Query: 557 ADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 248 ---LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 285
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 38/284 (13%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKYL- 149
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI--QENLKTHHSTKEIAGTP-GYMA 496
+ K+ +HRD+ + N MLD +F ++ DFGLAR + +E H+ T A P +MA
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG--AKLPVKWMA 205
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDA 556
ES + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR------- 255
Query: 557 ADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 256 ---LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 293
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 38/284 (13%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + YL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKYL- 147
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI--QENLKTHHSTKEIAGTP-GYMA 496
+ K+ +HRD+ + N MLD +F ++ DFGLAR + +E H+ T A P +MA
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG--AKLPVKWMA 203
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDA 556
ES + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR------- 253
Query: 557 ADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 254 ---LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 291
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 38/284 (13%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKYL- 148
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI--QENLKTHHSTKEIAGTP-GYMA 496
+ K+ +HRD+ + N MLD +F ++ DFGLAR + +E H+ T A P +MA
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG--AKLPVKWMA 204
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDA 556
ES + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR------- 254
Query: 557 ADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 255 ---LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 292
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 115/217 (52%), Gaps = 22/217 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQGKQEFIAEVTTIGSLR 372
F LG G FGTVYKG+W + +A+K + E TS + +E + E + S+
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
+ ++ +L+G C L+ + MP G L ++ + N G + LNW +++
Sbjct: 73 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIG-SQYLLNWCVQIA------ 124
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ + K +H+ E P
Sbjct: 125 EGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVP 179
Query: 493 -GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
+MA ES L T ++D++++GV + E+ G KP
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 122/232 (52%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 3 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIG-SQY 118
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFG A+ +
Sbjct: 119 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 169
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 170 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 38/284 (13%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + YL
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKYL- 146
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI--QENLKTHHSTKEIAGTP-GYMA 496
+ K+ +HRD+ + N MLD +F ++ DFGLAR + +E H+ T A P +MA
Sbjct: 147 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG--AKLPVKWMA 202
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDA 556
ES + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR------- 252
Query: 557 ADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 253 ---LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 290
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 122/232 (52%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQG 357
AP + L+ LK+ F LG G FGTVYKG+W + +A+K + E TS +
Sbjct: 10 APNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + S+ + ++ +L+G C L+ + MP G L ++ + N G +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIG-SQY 125
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + ++YL + +R++HRD+ + N+++ + + ++ DFG A+ +
Sbjct: 126 LLNWCVQIA------KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 176
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
K +H+ E P +MA ES L T ++D++++GV + E+ G KP
Sbjct: 177 EEKEYHA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%), Gaps = 38/284 (13%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + YL
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKYL- 144
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI--QENLKTHHSTKEIAGTP-GYMA 496
+ K+ +HRD+ + N MLD +F ++ DFGLAR + +E H+ T A P +MA
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG--AKLPVKWMA 200
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDA 556
ES + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR------- 250
Query: 557 ADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 251 ---LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 288
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 115/217 (52%), Gaps = 22/217 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK------EIAVKRVSE-TSRQGKQEFIAEVTTIGSLR 372
F LG G FGTVYKG+W + +A+K + E TS + +E + E + S+
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
+ ++ +L+G C L+ + MP G L ++ + N G + LNW +++
Sbjct: 70 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIG-SQYLLNWCVQIA------ 121
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ ++YL + +R++HRD+ + N+++ + + ++ DFGLA+ + K +H+ E P
Sbjct: 122 KGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVP 176
Query: 493 -GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
+MA ES L T ++D++++GV + E+ G KP
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 115/211 (54%), Gaps = 21/211 (9%)
Query: 327 LGKGGFGTVYKGIWR---NKE--IAVKRVS--ETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+G G FG V +G + KE +A+K + T RQ ++EF++E + +G H N+++L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ-RREFLSEASIMGQFEHPNIIRL 82
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G +++ E+M NG+LD F+ ++ G+ T+ + + ++ G + + YL
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLND-----GQFTVI--QLVGMLRGIASGMRYL- 134
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG--YMAP 497
+E +HRD+ + NI+++S ++ DFGL+R ++EN T + G + AP
Sbjct: 135 --AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
Query: 498 ESFLVGRATIETDIYAFGVLILEV-ACGRKP 527
E+ + T +D +++G+++ EV + G +P
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 15/223 (6%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVSETSRQGK-QEFIAEVTTIGSLRH 373
++ F KLG G + TVYKG+ + +A+K V S +G I E++ + L+H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+V+L + + LV+E+M N L K++ + P + LN K Q
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQ--WQLLQ 119
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H E ++LHRD+K N++++ +LGDFGLAR + T S E+ T
Sbjct: 120 GLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS--EVV-TLW 173
Query: 494 YMAPESFLVGRA-TIETDIYAFGVLILEVACGRK--PGNQSEQ 533
Y AP+ + R + DI++ G ++ E+ G+ PG E+
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE 216
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 17/218 (7%)
Query: 325 NKLGKGGFGTVYKGIWRNKE-IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
++G G FG V+ G W NK+ +A+K + E + +++FI E + L H LV+L G C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E+ LV E+M +G L ++ T G E L + + + YL E
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYL---RTQRG----LFAAETLLGMCLDVCEGMAYLE---E 122
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
V+HRD+ + N ++ ++ DFG+ R + ++ T + + + +PE F
Sbjct: 123 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP--VKWASPEVFSFS 180
Query: 504 RATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIV 541
R + ++D+++FGVL+ EV G +N N+ +V
Sbjct: 181 RYSSKSDVWSFGVLMWEVF---SEGKIPYENRSNSEVV 215
>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)
Length = 234
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 124/237 (52%), Gaps = 28/237 (11%)
Query: 27 LHFNFQSFTEQNRNELSFDNSTVAKSAIQVTYDVRGA----PITNQS-GRAIYKDQFQLW 81
+ FN+ F + D S + + ++ D R A P+ N++ A+Y +W
Sbjct: 1 VSFNYTRFKD--------DGSLIFQGDAKIWTDGRLAMPTDPLVNRTTSHALYATPVPIW 52
Query: 82 RDNKNVKATFSTTFVLNILN-QTAQPGEGLAFVIAG-NKDLPENSEGQWLGIVNGITNGT 139
A+F T+F + N Q P +G+ F +A ++P NS+G +LGI + +
Sbjct: 53 DSATGNVASFITSFSFIVSNVQRYPPTDGVVFFLAPWGTEIPPNSQGGYLGITD---SSN 109
Query: 140 NQSQIVAIEFDTKKSY--EQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYD 197
+Q+Q VA+EFD+ + + + +H+G+DVNS+ S++ V RV+ G+ K + YD
Sbjct: 110 SQNQFVAVEFDSHPNVWDPKSLRSSHIGIDVNSIMSLKAVNWNRVS---GSLEKATIIYD 166
Query: 198 GQN--ITVFVA--NMETPLLSEPIDLSEYLPEKVFVGFSASTGD-DTQLNCVKSWAF 249
+TV + N + +S+ IDL LPEKV VGFSA+T + + + + + SW+F
Sbjct: 167 SDTKILTVVMTHQNGQITTISQEIDLKTVLPEKVSVGFSATTWNPERERHDIYSWSF 223
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
K+G+G G V ++ +++AVK + +Q ++ EV + +H N+V++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
+ ++ E++ G+L + +V LN E+ +V QAL YLH
Sbjct: 112 LVGEELWVLMEFLQGGALTDIV---------SQVRLNEEQIATVCEAVLQALAYLHA--- 159
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ V+HRDIKS +I+L + +L DFG I +++ K + GTP +MAPE
Sbjct: 160 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR---KXLVGTPYWMAPEVISRS 216
Query: 504 RATIETDIYAFGVLILEVACGRKP 527
E DI++ G++++E+ G P
Sbjct: 217 LYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER 386
+GKG FG V G +R ++AVK + + Q F+AE + + LRH NLV+L+G E
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 387 HDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
L +V EYM GSL ++ G L + L +A++YL +
Sbjct: 87 KGGLYIVTEYMAKGSLVDYL------RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--- 137
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD+ + N+++ + A++ DFGL K ST++ P + APE+ +
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLT-------KEASSTQDTGKLPVKWTAPEALREKK 190
Query: 505 ATIETDIYAFGVLILEV-ACGRKP 527
+ ++D+++FG+L+ E+ + GR P
Sbjct: 191 FSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER 386
+GKG FG V G +R ++AVK + + Q F+AE + + LRH NLV+L+G E
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 387 HDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
L +V EYM GSL ++ G L + L +A++YL +
Sbjct: 72 KGGLYIVTEYMAKGSLVDYL------RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--- 122
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD+ + N+++ + A++ DFGL K ST++ P + APE+ +
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLT-------KEASSTQDTGKLPVKWTAPEALREKK 175
Query: 505 ATIETDIYAFGVLILEV-ACGRKP 527
+ ++D+++FG+L+ E+ + GR P
Sbjct: 176 FSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 115/211 (54%), Gaps = 21/211 (9%)
Query: 327 LGKGGFGTVYKGIWR---NKE--IAVKRVS--ETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+G G FG V +G + KE +A+K + T RQ ++EF++E + +G H N+++L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ-RREFLSEASIMGQFEHPNIIRL 80
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G +++ E+M NG+LD F+ ++ G+ T+ + + ++ G + + YL
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLND-----GQFTVI--QLVGMLRGIASGMRYL- 132
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG--YMAP 497
+E +HRD+ + NI+++S ++ DFGL+R ++EN T + G + AP
Sbjct: 133 --AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 498 ESFLVGRATIETDIYAFGVLILEV-ACGRKP 527
E+ + T +D +++G+++ EV + G +P
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 136/282 (48%), Gaps = 34/282 (12%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + +L
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKFL- 208
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPE 498
+ K+ +HRD+ + N MLD +F ++ DFGLAR + + K A P +MA E
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 499 SFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAAD 558
S + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR--------- 314
Query: 559 SRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 315 -LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 352
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 136/282 (48%), Gaps = 34/282 (12%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKFL- 149
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPE 498
+ K+ +HRD+ + N MLD +F ++ DFGLAR + + K A P +MA E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 499 SFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAAD 558
S + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPP-YPDVNTFDITV--YLLQGRR--------- 255
Query: 559 SRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 256 -LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 293
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER 386
+GKG FG V G +R ++AVK + + Q F+AE + + LRH NLV+L+G E
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 387 HDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
L +V EYM GSL ++ G L + L +A++YL +
Sbjct: 259 KGGLYIVTEYMAKGSLVDYL------RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--- 309
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD+ + N+++ + A++ DFGL K ST++ P + APE+ +
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLT-------KEASSTQDTGKLPVKWTAPEALREKK 362
Query: 505 ATIETDIYAFGVLILEV-ACGRKP 527
+ ++D+++FG+L+ E+ + GR P
Sbjct: 363 FSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 138/290 (47%), Gaps = 42/290 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLR 372
N + +G G FG V G + KEI+V +V T +Q +++F+ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 104
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N+++L G + ++V E M NGSLD F+ + + + ++ G +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIA 157
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ YL S+ +HRD+ + NI+++S ++ DFGL+R ++++ + ++T+
Sbjct: 158 SGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
+ +PE+ + T +D++++G+++ EV + G +P WE+ +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD 258
Query: 552 RILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
++ A D G M+C + L L C + + RP + ++ +L
Sbjct: 259 -VIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 136/282 (48%), Gaps = 34/282 (12%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + +L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKFL- 147
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPE 498
+ K+ +HRD+ + N MLD +F ++ DFGLAR + + K A P +MA E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 499 SFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAAD 558
S + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAPP-YPDVNTFDITV--YLLQGRR--------- 253
Query: 559 SRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 254 -LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 291
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 136/282 (48%), Gaps = 34/282 (12%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKFL- 150
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPE 498
+ K+ +HRD+ + N MLD +F ++ DFGLAR + + K A P +MA E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 499 SFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAAD 558
S + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR--------- 256
Query: 559 SRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 257 -LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 294
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 136/282 (48%), Gaps = 34/282 (12%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + +L
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKFL- 154
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPE 498
+ K+ +HRD+ + N MLD +F ++ DFGLAR + + K A P +MA E
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 499 SFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAAD 558
S + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR--------- 260
Query: 559 SRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 261 -LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 298
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 106/224 (47%), Gaps = 22/224 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSE-TSRQGKQEFI 362
LKE+ + N LG G FG VY+G ++AVK + E S Q + +F+
Sbjct: 39 LKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 96
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV-TLNW 421
E I L H+N+V+ IG + ++ E M G L F+ ET P + +L
Sbjct: 97 MEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL--RETRPRPSQPSSLAM 154
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQEN 478
L V + YL E +HRDI + N +L A++GDFG+AR I
Sbjct: 155 LDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR- 210
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+++ A P +M PE+F+ G T +TD ++FGVL+ E+
Sbjct: 211 -ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 136/282 (48%), Gaps = 34/282 (12%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKFL- 149
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPE 498
+ K+ +HRD+ + N MLD +F ++ DFGLAR + + K A P +MA E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 499 SFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAAD 558
S + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR--------- 255
Query: 559 SRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 256 -LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 293
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 106/224 (47%), Gaps = 22/224 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSET-SRQGKQEFI 362
LKE+ + N LG G FG VY+G ++AVK + E S Q + +F+
Sbjct: 25 LKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 82
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGE-VTLNW 421
E I L H+N+V+ IG + ++ E M G L F+ ET P + +L
Sbjct: 83 MEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL--RETRPRPSQPSSLAM 140
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQEN 478
L V + YL E +HRDI + N +L A++GDFG+AR I
Sbjct: 141 LDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR- 196
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+++ A P +M PE+F+ G T +TD ++FGVL+ E+
Sbjct: 197 -ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 23/225 (10%)
Query: 311 LKELKKATGNFNPKNK------LGKGGFGTVYKG--IWRNKEIAVKRVSETSRQGKQEFI 362
L++L+ +PK K +G+G GTVY + +E+A+++++ + K+ I
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII 65
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWE 422
E+ + ++ N+V + + +V EY+ GSL + ET G++
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIA---- 119
Query: 423 KRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTH 482
+V QAL++LH+ +V+HRDIKS NI+L + + +L DFG I
Sbjct: 120 ---AVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---Q 170
Query: 483 HSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
E+ GTP +MAPE + DI++ G++ +E+ G P
Sbjct: 171 SKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 136/282 (48%), Gaps = 34/282 (12%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG VY G + + AVK ++ + G+ +F+ E + H N++ L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 381 GWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G C L+V YM +G L FI +ET++ + + + +++ + + +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVA------KGMKFL- 150
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPE 498
+ K+ +HRD+ + N MLD +F ++ DFGLAR + + K A P +MA E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 499 SFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAAD 558
S + T ++D+++FGVL+ E+ P + N+++ ++ +L + RR
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-PYPDVNTFDITV--YLLQGRR--------- 256
Query: 559 SRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVLSG 600
L E+ + V+ L C HP +RPS ++ +S
Sbjct: 257 -LLQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRISA 294
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 138/290 (47%), Gaps = 42/290 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLR 372
N + +G G FG V G + KEI+V +V T +Q +++F+ E + +G
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 75
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N+++L G + ++V E M NGSLD F+ + + + ++ G +
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIA 128
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ YL S+ +HRD+ + NI+++S ++ DFGL+R ++++ + ++T+
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
+ +PE+ + T +D++++G+++ EV + G +P WE+ +
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD 229
Query: 552 RILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
++ A D G M+C + L L C + + RP + ++ +L
Sbjct: 230 -VIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER 386
+GKG FG V G +R ++AVK + + Q F+AE + + LRH NLV+L+G E
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 387 HDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
L +V EYM GSL ++ G L + L +A++YL +
Sbjct: 78 KGGLYIVTEYMAKGSLVDYL------RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--- 128
Query: 446 VLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGR 504
+HRD+ + N+++ + A++ DFGL K ST++ P + APE+
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLT-------KEASSTQDTGKLPVKWTAPEALREAA 181
Query: 505 ATIETDIYAFGVLILEV-ACGRKP 527
+ ++D+++FG+L+ E+ + GR P
Sbjct: 182 FSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 138/290 (47%), Gaps = 42/290 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLR 372
N + +G G FG V G + KEI+V +V T +Q +++F+ E + +G
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 104
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N+++L G + ++V E M NGSLD F+ + + + ++ G +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIA 157
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+ YL S+ +HRD+ + NI+++S ++ DFGL+R ++++ + ++T+
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
+ +PE+ + T +D++++G+++ EV + G +P WE+ +
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQD 258
Query: 552 RILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
++ A D G M+C + L L C + + RP + ++ +L
Sbjct: 259 -VIKAVDE---GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 108/203 (53%), Gaps = 21/203 (10%)
Query: 327 LGKGGFGTVYKGIWRNK------EIAVKRVSETS-RQGKQEFIAEVTTIGSLRHRNLVKL 379
LG G FGTV+KG+W + + +K + + S RQ Q + IGSL H ++V+L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
+G C LV +Y+P GSL + GP ++ LNW ++ ++ + YL
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGP-QLLLNWGVQI------AKGMYYL- 149
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPE 498
E ++HR++ + N++L S ++ DFG+A + + K ++ A TP +MA E
Sbjct: 150 --EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE--AKTPIKWMALE 205
Query: 499 SFLVGRATIETDIYAFGVLILEV 521
S G+ T ++D++++GV + E+
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWEL 228
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 108/203 (53%), Gaps = 21/203 (10%)
Query: 327 LGKGGFGTVYKGIWRNK------EIAVKRVSETS-RQGKQEFIAEVTTIGSLRHRNLVKL 379
LG G FGTV+KG+W + + +K + + S RQ Q + IGSL H ++V+L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
+G C LV +Y+P GSL + GP ++ LNW ++ ++ + YL
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGP-QLLLNWGVQI------AKGMYYL- 131
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPE 498
E ++HR++ + N++L S ++ DFG+A + + K ++ A TP +MA E
Sbjct: 132 --EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE--AKTPIKWMALE 187
Query: 499 SFLVGRATIETDIYAFGVLILEV 521
S G+ T ++D++++GV + E+
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWEL 210
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 115/230 (50%), Gaps = 21/230 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
LG+G FG+V +G + ++ +AVK ++ +S++ +EF++E + H N+++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 380 IGWCYERHDF-----LLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
+G C E +++ +M G L ++ Y +GP + L + L + +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL--QTLLKFMVDIALG 159
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-G 493
++YL N + LHRD+ + N ML + + DFGL++ I ++ IA P
Sbjct: 160 MEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG--DYYRQGRIAKMPVK 214
Query: 494 YMAPESFLVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIVH 542
++A ES T ++D++AFGV + E+A G P + + + ++H
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH 264
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 111/209 (53%), Gaps = 19/209 (9%)
Query: 327 LGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+G G FG V G + +EI V + T +Q +++F++E + +G H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPNIIHL 95
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G + +++ EYM NGSLD F+ N G V + + ++ G + YL
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVI----QLVGMLRGIGSGMKYL- 147
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
S+ +HRD+ + NI+++S ++ DFG++R ++++ + ++T+ + APE+
Sbjct: 148 --SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 205
Query: 500 FLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ T +D++++G+++ EV + G +P
Sbjct: 206 IAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
K+G+G G V ++ K++AVK++ +Q ++ EV + H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
+ +V E++ G+L + + N E+ +V +AL YLHN
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNE---------EQIATVCLSVLRALSYLHN--- 159
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ V+HRDIKS +I+L S+ +L DFG + + + K + GTP +MAPE
Sbjct: 160 QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP---KRKXLVGTPYWMAPEVISRL 216
Query: 504 RATIETDIYAFGVLILEVACGRKP 527
E DI++ G++++E+ G P
Sbjct: 217 PYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 23/225 (10%)
Query: 311 LKELKKATGNFNPKNK------LGKGGFGTVYKG--IWRNKEIAVKRVSETSRQGKQEFI 362
L++L+ +PK K +G+G GTVY + +E+A+++++ + K+ I
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII 65
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWE 422
E+ + ++ N+V + + +V EY+ GSL + ET G++
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIA---- 119
Query: 423 KRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTH 482
+V QAL++LH+ +V+HRDIKS NI+L + + +L DFG I ++
Sbjct: 120 ---AVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-QSK 172
Query: 483 HSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
ST + GTP +MAPE + DI++ G++ +E+ G P
Sbjct: 173 RST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSE-TSRQGKQEFI 362
LKE+ + N LG G FG VY+G ++AVK + E S Q + +F+
Sbjct: 16 LKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 73
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT-LNW 421
E I H+N+V+ IG + ++ E M G L F+ ET P + + L
Sbjct: 74 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL--RETRPRPSQPSSLAM 131
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQEN 478
L V + YL E +HRDI + N +L A++GDFG+AR I
Sbjct: 132 LDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR- 187
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+++ A P +M PE+F+ G T +TD ++FGVL+ E+
Sbjct: 188 -ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 111/209 (53%), Gaps = 19/209 (9%)
Query: 327 LGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+G G FG V G + +EI V + T +Q +++F++E + +G H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPNIIHL 80
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G + +++ EYM NGSLD F+ N G V + + ++ G + YL
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVI----QLVGMLRGIGSGMKYL- 132
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
S+ +HRD+ + NI+++S ++ DFG++R ++++ + ++T+ + APE+
Sbjct: 133 --SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 500 FLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ T +D++++G+++ EV + G +P
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSE-TSRQGKQEFI 362
LKE+ + N LG G FG VY+G ++AVK + E S Q + +F+
Sbjct: 24 LKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 81
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT-LNW 421
E I H+N+V+ IG + ++ E M G L F+ ET P + + L
Sbjct: 82 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL--RETRPRPSQPSSLAM 139
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQEN 478
L V + YL E +HRDI + N +L A++GDFG+AR I
Sbjct: 140 LDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR- 195
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+++ A P +M PE+F+ G T +TD ++FGVL+ E+
Sbjct: 196 -ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSE-TSRQGKQEFI 362
LKE+ + N LG G FG VY+G ++AVK + E S Q + +F+
Sbjct: 24 LKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 81
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT-LNW 421
E I H+N+V+ IG + ++ E M G L F+ ET P + + L
Sbjct: 82 MEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL--RETRPRPSQPSSLAM 139
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQEN 478
L V + YL E +HRDI + N +L A++GDFG+AR I
Sbjct: 140 LDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR- 195
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+++ A P +M PE+F+ G T +TD ++FGVL+ E+
Sbjct: 196 -ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSE-TSRQGKQEFI 362
LKE+ + N LG G FG VY+G ++AVK + E S Q + +F+
Sbjct: 39 LKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 96
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT-LNW 421
E I H+N+V+ IG + ++ E M G L F+ ET P + + L
Sbjct: 97 MEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL--RETRPRPSQPSSLAM 154
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQEN 478
L V + YL E +HRDI + N +L A++GDFG+AR I
Sbjct: 155 LDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR- 210
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+++ A P +M PE+F+ G T +TD ++FGVL+ E+
Sbjct: 211 -ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSE-TSRQGKQEFI 362
LKE+ + N LG G FG VY+G ++AVK + E S Q + +F+
Sbjct: 41 LKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 98
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGE-VTLNW 421
E I H+N+V+ IG + ++ E M G L F+ ET P + +L
Sbjct: 99 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL--RETRPRPSQPSSLAM 156
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQEN 478
L V + YL E +HRDI + N +L A++GDFG+AR I
Sbjct: 157 LDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR- 212
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+++ A P +M PE+F+ G T +TD ++FGVL+ E+
Sbjct: 213 -ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSET-SRQGKQEFI 362
LKE+ + N LG G FG VY+G ++AVK + E S Q + +F+
Sbjct: 39 LKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFL 96
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT-LNW 421
E I H+N+V+ IG + ++ E M G L F+ ET P + + L
Sbjct: 97 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL--RETRPRPSQPSSLAM 154
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQEN 478
L V + YL E +HRDI + N +L A++GDFG+AR I
Sbjct: 155 LDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR- 210
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+++ A P +M PE+F+ G T +TD ++FGVL+ E+
Sbjct: 211 -ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSET-SRQGKQEFI 362
LKE+ + N LG G FG VY+G ++AVK + E S Q + +F+
Sbjct: 31 LKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 88
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT-LNW 421
E I H+N+V+ IG + ++ E M G L F+ ET P + + L
Sbjct: 89 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL--RETRPRPSQPSSLAM 146
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQEN 478
L V + YL E +HRDI + N +L A++GDFG+AR I
Sbjct: 147 LDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR- 202
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+++ A P +M PE+F+ G T +TD ++FGVL+ E+
Sbjct: 203 -ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 111/209 (53%), Gaps = 19/209 (9%)
Query: 327 LGKGGFGTVYKGIWR---NKEIAVK----RVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+G G FG V G + +EI V + T +Q +++F++E + +G H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPNIIHL 74
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G + +++ EYM NGSLD F+ N G V + + ++ G + YL
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVI----QLVGMLRGIGSGMKYL- 126
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
S+ +HRD+ + NI+++S ++ DFG++R ++++ + ++T+ + APE+
Sbjct: 127 --SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 500 FLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ T +D++++G+++ EV + G +P
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 117/228 (51%), Gaps = 29/228 (12%)
Query: 317 ATGNFNPKN---KLGK-GGFGTVYKGIWRNKEIAV----KRVSETSRQGKQEFIAEVTTI 368
T + NP++ +G+ G FG VYK +NKE +V K + S + ++++ E+ +
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 61
Query: 369 GSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVI 428
S H N+VKL+ Y ++ ++ E+ G++D + E ++ + V
Sbjct: 62 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VC 114
Query: 429 HGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE- 487
T AL+YLH+ +++HRD+K+ NI+ + + +L DFG++ +N +T ++
Sbjct: 115 KQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTXIQRRDS 168
Query: 488 IAGTPGYMAPESFLVGRAT-----IETDIYAFGVLILEVACGRKPGNQ 530
GTP +MAPE + + + D+++ G+ ++E+A P ++
Sbjct: 169 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE 216
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 35/279 (12%)
Query: 321 FNPKNKLGKGGFGTVYKGI-WRNKEIAVKRVSETSRQGKQEFIA--EVTTIGSLRHRNLV 377
F ++GKG FG V+KGI R +++ ++ + + E+T + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
K G + ++ EY+ GS D +GP + + +++ + LDY
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSA-----LDLLRAGP----FDEFQIATMLKEILKGLDY 135
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH SEK++ HRDIK++N++L + + +L DFG+A + + T GTP +MAP
Sbjct: 136 LH--SEKKI-HRDIKAANVLLSEQGDVKLADFGVAGQLTD---TQIKRNTFVGTPFWMAP 189
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAA 557
E + DI++ G+ +E+A G P NS +H +R I
Sbjct: 190 EVIQQSAYDSKADIWSLGITAIELAKGEPP----------NSDMH---PMRVLFLIPKNN 236
Query: 558 DSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQ 596
L G+F++ E + AC + +P RP+ K +L+
Sbjct: 237 PPTLVGDFTKSFKEFI----DACLNKDPSFRPTAKELLK 271
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSET-SRQGKQEFI 362
LKE+ + N LG G FG VY+G ++AVK + E S Q + +F+
Sbjct: 25 LKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 82
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT-LNW 421
E I H+N+V+ IG + ++ E M G L F+ ET P + + L
Sbjct: 83 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL--RETRPRPSQPSSLAM 140
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQEN 478
L V + YL E +HRDI + N +L A++GDFG+AR I
Sbjct: 141 LDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR- 196
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+++ A P +M PE+F+ G T +TD ++FGVL+ E+
Sbjct: 197 -ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSET-SRQGKQEFI 362
LKE+ + N LG G FG VY+G ++AVK + E S Q + +F+
Sbjct: 51 LKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 108
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGE-VTLNW 421
E I H+N+V+ IG + ++ E M G L F+ ET P + +L
Sbjct: 109 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL--RETRPRPSQPSSLAM 166
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQEN 478
L V + YL E +HRDI + N +L A++GDFG+AR I
Sbjct: 167 LDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR- 222
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+++ A P +M PE+F+ G T +TD ++FGVL+ E+
Sbjct: 223 -ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 23/225 (10%)
Query: 311 LKELKKATGNFNPKNK------LGKGGFGTVYKG--IWRNKEIAVKRVSETSRQGKQEFI 362
L++L+ +PK K +G+G GTVY + +E+A+++++ + K+ I
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII 65
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWE 422
E+ + ++ N+V + + +V EY+ GSL + ET G++
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIA---- 119
Query: 423 KRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTH 482
+V QAL++LH+ +V+HRDIKS NI+L + + +L DFG I
Sbjct: 120 ---AVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---Q 170
Query: 483 HSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP +MAPE + DI++ G++ +E+ G P
Sbjct: 171 SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 23/225 (10%)
Query: 311 LKELKKATGNFNPKNK------LGKGGFGTVYKG--IWRNKEIAVKRVSETSRQGKQEFI 362
L++L+ +PK K +G+G GTVY + +E+A+++++ + K+ I
Sbjct: 7 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII 66
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWE 422
E+ + ++ N+V + + +V EY+ GSL + ET G++
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIA---- 120
Query: 423 KRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTH 482
+V QAL++LH+ +V+HRDIKS NI+L + + +L DFG I
Sbjct: 121 ---AVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---Q 171
Query: 483 HSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP +MAPE + DI++ G++ +E+ G P
Sbjct: 172 SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 136/295 (46%), Gaps = 47/295 (15%)
Query: 324 KNKLGKGGFGTVYKGIWRNK----EIAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRNLV 377
++ +G+G FG V K + + A+KR+ E S+ ++F E+ + L H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYD---ETN-----SGPGEVTLNWEKRLSVIH 429
L+G C R L EY P+G+L F+ ET+ + TL+ ++ L
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 430 GTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA 489
++ +DYL S+K+ +HRD+ + NI++ + A++ DFGL+R + +K K +
Sbjct: 140 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK-----KTMG 191
Query: 490 GTP-GYMAPESFLVGRATIETDIYAFGVLILE-VACGRKPGNQSEQNSYNNSIVHWLWEL 547
P +MA ES T +D++++GVL+ E V+ G P Y L+E
Sbjct: 192 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP--------YCGMTCAELYEK 243
Query: 548 RRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVLS 599
+G L EK + C V L C P+ RPS +L L+
Sbjct: 244 LPQGYRL------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 286
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 28/219 (12%)
Query: 327 LGKGGFGTVYK----GIWRNKE---IAVKRVSETSRQGKQ-EFIAEVTTIGSLRHRNLVK 378
+G+G FG V++ G+ + +AVK + E + Q +F E + + N+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 379 LIGWCYERHDFLLVYEYMPNGSLDKFIFYDETN----------------SGPGEVTLNWE 422
L+G C L++EYM G L++F+ + S PG L+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 423 KRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTH 482
++L + + + YL SE++ +HRD+ + N ++ ++ DFGL+R I + +
Sbjct: 175 EQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY-SADYY 230
Query: 483 HSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV 521
+ A +M PES R T E+D++A+GV++ E+
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 136/295 (46%), Gaps = 47/295 (15%)
Query: 324 KNKLGKGGFGTVYKGIWRNK----EIAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRNLV 377
++ +G+G FG V K + + A+KR+ E S+ ++F E+ + L H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYD---ETN-----SGPGEVTLNWEKRLSVIH 429
L+G C R L EY P+G+L F+ ET+ + TL+ ++ L
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 430 GTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA 489
++ +DYL S+K+ +HRD+ + NI++ + A++ DFGL+R + +K K +
Sbjct: 150 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK-----KTMG 201
Query: 490 GTP-GYMAPESFLVGRATIETDIYAFGVLILE-VACGRKPGNQSEQNSYNNSIVHWLWEL 547
P +MA ES T +D++++GVL+ E V+ G P Y L+E
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP--------YCGMTCAELYEK 253
Query: 548 RRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVLS 599
+G L EK + C V L C P+ RPS +L L+
Sbjct: 254 LPQGYRL------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 296
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 104/224 (46%), Gaps = 22/224 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSE-TSRQGKQEFI 362
LKE+ + N LG G FG VY+G ++AVK + E S Q + +F+
Sbjct: 65 LKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 122
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT-LNW 421
E I H+N+V+ IG + ++ E M G L F+ ET P + + L
Sbjct: 123 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL--RETRPRPSQPSSLAM 180
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQEN 478
L V + YL E +HRDI + N +L A++GDFG+AR I
Sbjct: 181 LDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR- 236
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
++ A P +M PE+F+ G T +TD ++FGVL+ E+
Sbjct: 237 -AGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNL 376
TG++ K+ + G + +W KE+ ++E KQ ++EV + L+H N+
Sbjct: 15 GTGSYGRCQKIRRKSDGKIL--VW--KELDYGSMTEAE---KQMLVSEVNLLRELKHPNI 67
Query: 377 VKLIGWCYERHD--FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
V+ +R + +V EY G L I T L+ E L V+ + A
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVI----TKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 435 LDYLHNGSE--KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
L H S+ VLHRD+K +N+ LD + N +LGDFGLAR + + KE GTP
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD---EDFAKEFVGTP 180
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
YM+PE ++DI++ G L+ E+ C P
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP 214
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 104/224 (46%), Gaps = 22/224 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSE-TSRQGKQEFI 362
LKE+ + N LG G FG VY+G ++AVK + E S Q + +F+
Sbjct: 42 LKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 99
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT-LNW 421
E I H+N+V+ IG + ++ E M G L F+ ET P + + L
Sbjct: 100 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL--RETRPRPSQPSSLAM 157
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQEN 478
L V + YL E +HRDI + N +L A++GDFG+AR I
Sbjct: 158 LDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR- 213
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
++ A P +M PE+F+ G T +TD ++FGVL+ E+
Sbjct: 214 -AGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 24/222 (10%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG V++GI+ + E +A+K TS +++F+ E T+ H ++VKLI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G E + ++ E G L F+ + +L+ + + S AL YL +
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFL-------QVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
KR +HRDI + N+++ S +LGDFGL+R ++++ T++ + +MAPES
Sbjct: 510 ---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS--TYYKASKGKLPIKWMAPESI 564
Query: 501 LVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIV 541
R T +D++ FGV + E+ G KP Q NN ++
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 602
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 24/222 (10%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG V++GI+ + E +A+K TS +++F+ E T+ H ++VKLI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G E + ++ E G L F+ + +L+ + + S AL YL +
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFL-------QVRKYSLDLASLILYAYQLSTALAYLES 126
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
KR +HRDI + N+++ S +LGDFGL+R ++++ T++ + +MAPES
Sbjct: 127 ---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS--TYYKASKGKLPIKWMAPESI 181
Query: 501 LVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIV 541
R T +D++ FGV + E+ G KP Q NN ++
Sbjct: 182 NFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 219
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 24/222 (10%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG V++GI+ + E +A+K TS +++F+ E T+ H ++VKLI
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G E + ++ E G L F+ + +L+ + + S AL YL +
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFLQVRK-------YSLDLASLILYAYQLSTALAYLES 157
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
KR +HRDI + N+++ S +LGDFGL+R ++++ T++ + +MAPES
Sbjct: 158 ---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS--TYYKASKGKLPIKWMAPESI 212
Query: 501 LVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIV 541
R T +D++ FGV + E+ G KP Q NN ++
Sbjct: 213 NFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 250
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 24/222 (10%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG V++GI+ + E +A+K TS +++F+ E T+ H ++VKLI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G E + ++ E G L F+ + +L+ + + S AL YL +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL-------QVRKYSLDLASLILYAYQLSTALAYLES 129
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
KR +HRDI + N+++ S +LGDFGL+R ++++ T++ + +MAPES
Sbjct: 130 ---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS--TYYKASKGKLPIKWMAPESI 184
Query: 501 LVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIV 541
R T +D++ FGV + E+ G KP Q NN ++
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 222
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 24/222 (10%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG V++GI+ + E +A+K TS +++F+ E T+ H ++VKLI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G E + ++ E G L F+ + +L+ + + S AL YL +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK-------FSLDLASLILYAYQLSTALAYLES 129
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
KR +HRDI + N+++ S +LGDFGL+R ++++ S ++ +MAPES
Sbjct: 130 ---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK--WMAPESI 184
Query: 501 LVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIV 541
R T +D++ FGV + E+ G KP Q NN ++
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 222
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 24/222 (10%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG V++GI+ + E +A+K TS +++F+ E T+ H ++VKLI
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G E + ++ E G L F+ + +L+ + + S AL YL +
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFLQVRK-------YSLDLASLILYAYQLSTALAYLES 131
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
KR +HRDI + N+++ S +LGDFGL+R ++++ T++ + +MAPES
Sbjct: 132 ---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS--TYYKASKGKLPIKWMAPESI 186
Query: 501 LVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIV 541
R T +D++ FGV + E+ G KP Q NN ++
Sbjct: 187 NFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 224
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 104/190 (54%), Gaps = 14/190 (7%)
Query: 341 RNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPN 398
R+ +A+K + T RQ +++F++E + +G H N+++L G ++V EYM N
Sbjct: 76 RDVPVAIKALKAGYTERQ-RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMEN 134
Query: 399 GSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIML 458
GSLD F+ + G+ T+ + + ++ G + YL S+ +HRD+ + N+++
Sbjct: 135 GSLDTFL-----RTHDGQFTIM--QLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLV 184
Query: 459 DSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLI 518
DS ++ DFGL+R ++++ ++T + APE+ + +D+++FGV++
Sbjct: 185 DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVM 244
Query: 519 LEV-ACGRKP 527
EV A G +P
Sbjct: 245 WEVLAYGERP 254
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 24/222 (10%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG V++GI+ + E +A+K TS +++F+ E T+ H ++VKLI
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G E + ++ E G L F+ + +L+ + + S AL YL +
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFLQVRK-------YSLDLASLILYAYQLSTALAYLES 132
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
KR +HRDI + N+++ S +LGDFGL+R ++++ T++ + +MAPES
Sbjct: 133 ---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS--TYYKASKGKLPIKWMAPESI 187
Query: 501 LVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIV 541
R T +D++ FGV + E+ G KP Q NN ++
Sbjct: 188 NFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 225
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 115/237 (48%), Gaps = 28/237 (11%)
Query: 301 GTNLAPKKFRLKELKKATGNFNPKN------KLGKGGFGTVYKGIWRN--KEIAVKRVSE 352
G++++ ++FR L+ +P++ K+G+G G V R+ K +AVK++
Sbjct: 1 GSHMSHEQFR-AALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDL 59
Query: 353 TSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNS 412
+Q ++ EV + +H N+V++ + +V E++ G+L + + N
Sbjct: 60 RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE 119
Query: 413 GPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLA 472
E+ +V QAL LH + V+HRDIKS +I+L + +L DFG
Sbjct: 120 ---------EQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFC 167
Query: 473 RTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATI--ETDIYAFGVLILEVACGRKP 527
+ + + K + GTP +MAPE L+ R E DI++ G++++E+ G P
Sbjct: 168 AQVSKEVPRR---KXLVGTPYWMAPE--LISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 24/222 (10%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG V++GI+ + E +A+K TS +++F+ E T+ H ++VKLI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G E + ++ E G L F+ + +L+ + + S AL YL +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL-------QVRKYSLDLASLILYAYQLSTALAYLES 129
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
KR +HRDI + N+++ S +LGDFGL+R ++++ T++ + +MAPES
Sbjct: 130 ---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS--TYYKASKGKLPIKWMAPESI 184
Query: 501 LVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIV 541
R T +D++ FGV + E+ G KP Q NN ++
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 222
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 24/222 (10%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG V++GI+ + E +A+K TS +++F+ E T+ H ++VKLI
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G E + ++ E G L F+ + +L+ + + S AL YL +
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFLQVRK-------YSLDLASLILYAYQLSTALAYLES 134
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
KR +HRDI + N+++ S +LGDFGL+R ++++ T++ + +MAPES
Sbjct: 135 ---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS--TYYKASKGKLPIKWMAPESI 189
Query: 501 LVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIV 541
R T +D++ FGV + E+ G KP Q NN ++
Sbjct: 190 NFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 227
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 35/279 (12%)
Query: 321 FNPKNKLGKGGFGTVYKGI--WRNKEIAVKRVS-ETSRQGKQEFIAEVTTIGSLRHRNLV 377
F K+GKG FG V+KGI K +A+K + E + ++ E+T + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
K G + ++ EY+ GS D GP L+ + +++ + LDY
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSA-----LDLLEPGP----LDETQIATILREILKGLDY 139
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH SEK++ HRDIK++N++L +L DFG+A + + T GTP +MAP
Sbjct: 140 LH--SEKKI-HRDIKAANVLLSEHGEVKLADFGVAGQLTD---TQIKRNTFVGTPFWMAP 193
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAA 557
E + DI++ G+ +E+A G P ++ L ++ I
Sbjct: 194 EVIKQSAYDSKADIWSLGITAIELARGEPPHSE-------------LHPMKVLFLIPKNN 240
Query: 558 DSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQ 596
L G +S+ E V AC + P RP+ K +L+
Sbjct: 241 PPTLEGNYSKPLKEFV----EACLNKEPSFRPTAKELLK 275
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 117/232 (50%), Gaps = 24/232 (10%)
Query: 305 APKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW----RNKEI--AVKRVSE-TSRQG 357
AP + L+ LK+ LG G FGTVYKGIW N +I A+K + E TS +
Sbjct: 5 APNQALLRILKET--ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKA 62
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV 417
+E + E + + + +L+G C LV + MP G L + + G ++
Sbjct: 63 NKEILDEAYVMAGVGSPYVSRLLGICLT-STVQLVTQLMPYGCLLDHVRENRGRLGSQDL 121
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
LNW +++ + + YL + R++HRD+ + N+++ S + ++ DFGLAR +
Sbjct: 122 -LNWCMQIA------KGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 171
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKP 527
+ +H+ P +MA ES L R T ++D++++GV + E+ G KP
Sbjct: 172 DETEYHADG--GKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 113/213 (53%), Gaps = 23/213 (10%)
Query: 327 LGKGGFGTVYK----GIWRNK---EIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG G FG V + G+ + ++AVK + T+ ++E ++E+ + L +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPG-----EVTLNWEKRLS---VIH 429
L+G C L++ EY G L F+ PG + N E++LS ++H
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFL---RRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 430 GTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA 489
+SQ + + K +HRD+ + N++L + A++GDFGLAR I + +++ K A
Sbjct: 171 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND--SNYIVKGNA 228
Query: 490 GTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
P +MAPES T+++D++++G+L+ E+
Sbjct: 229 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 112/209 (53%), Gaps = 19/209 (9%)
Query: 327 LGKGGFGTVYKGIW-----RNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+G G FG V G R+ +A+K +V T +Q +++F+ E + +G H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ-RRDFLCEASIMGQFDHPNVVHL 109
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G ++V E+M NG+LD F+ G+ T+ + + ++ G + + YL
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFL-----RKHDGQFTVI--QLVGMLRGIAAGMRYL- 161
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
++ +HRD+ + NI+++S ++ DFGL+R I+++ + ++T + APE+
Sbjct: 162 --ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEA 219
Query: 500 FLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ T +D++++G+++ EV + G +P
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 326 KLGKGGFGTVYKG--IWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
K+G+G GTVY + +E+A+++++ + K+ I E+ + ++ N+V +
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
+ +V EY+ GSL + ET G++ +V QAL++LH+
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIA-------AVCRECLQALEFLHSN-- 136
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+V+HR+IKS NI+L + + +L DFG I ++ ST + GTP +MAPE
Sbjct: 137 -QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE-QSKRST--MVGTPYWMAPEVVTRK 192
Query: 504 RATIETDIYAFGVLILEVACGRKP 527
+ DI++ G++ +E+ G P
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 21/206 (10%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
K+G+G G V R+ K +AVK++ +Q ++ EV + +H N+V++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
+ +V E++ G+L + + N E+ +V QAL LH
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNE---------EQIAAVCLAVLQALSVLH---A 143
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ V+HRDIKS +I+L + +L DFG + + + K + GTP +MAPE L+
Sbjct: 144 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPE--LIS 198
Query: 504 RATI--ETDIYAFGVLILEVACGRKP 527
R E DI++ G++++E+ G P
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK-------EIAVKRVSET-SRQGKQEFI 362
LKE+ + N LG G FG VY+G ++AVK + E S Q + +F+
Sbjct: 25 LKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL 82
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT-LNW 421
E I H+N+V+ IG + ++ E M G L F+ ET P + + L
Sbjct: 83 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL--RETRPRPSQPSSLAM 140
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQEN 478
L V + YL E +HRDI + N +L A++GDFG+A+ I
Sbjct: 141 LDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYR- 196
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+++ A P +M PE+F+ G T +TD ++FGVL+ E+
Sbjct: 197 -ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
K+G+G G V R+ K +AVK++ +Q ++ EV + +H N+V++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
+ +V E++ G+L + + +N E+ +V QAL LH
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTR---------MNEEQIAAVCLAVLQALSVLH---A 145
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ V+HRDIKS +I+L + +L DFG + + + K + GTP +MAPE L+
Sbjct: 146 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPE--LIS 200
Query: 504 RATI--ETDIYAFGVLILEVACGRKP 527
R E DI++ G++++E+ G P
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 21/206 (10%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
K+G+G G V R+ K +AVK++ +Q ++ EV + +H N+V++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
+ +V E++ G+L + + +N E+ +V QAL LH
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVLHAQG- 267
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
V+HRDIKS +I+L + +L DFG + + + K + GTP +MAPE L+
Sbjct: 268 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPE--LIS 320
Query: 504 RATI--ETDIYAFGVLILEVACGRKP 527
R E DI++ G++++E+ G P
Sbjct: 321 RLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 113/222 (50%), Gaps = 24/222 (10%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG V++GI+ + E +A+K TS +++F+ E T+ H ++VKLI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G E + ++ E G L F+ + +L+ + + S AL YL +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL-------QVRKFSLDLASLILYAYQLSTALAYLES 129
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
KR +HRDI + N+++ + +LGDFGL+R ++++ T++ + +MAPES
Sbjct: 130 ---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS--TYYKASKGKLPIKWMAPESI 184
Query: 501 LVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIV 541
R T +D++ FGV + E+ G KP Q NN ++
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 222
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 27/207 (13%)
Query: 324 KNKLGKGGFGTVYKGIW-RNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGW 382
+ KLG G FG V+ + ++ ++AVK + S + F+AE + +L+H LVKL
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHA- 244
Query: 383 CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGS 442
+ ++ E+M GSL F+ DE + P +I ++Q + +
Sbjct: 245 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP---------KLIDFSAQIAEGMAFIE 295
Query: 443 EKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFL 501
++ +HRD++++NI++ + ++ DFGLAR A P + APE+
Sbjct: 296 QRNYIHRDLRAANILVSASLVCKIADFGLARV-------------GAKFPIKWTAPEAIN 342
Query: 502 VGRATIETDIYAFGVLILEVAC-GRKP 527
G TI++D+++FG+L++E+ GR P
Sbjct: 343 FGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 21/206 (10%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
K+G+G G V R+ K +AVK++ +Q ++ EV + +H N+V++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
+ +V E++ G+L + + N E+ +V QAL LH
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNE---------EQIAAVCLAVLQALSVLH---A 134
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ V+HRDIKS +I+L + +L DFG + + + K + GTP +MAPE L+
Sbjct: 135 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPE--LIS 189
Query: 504 RATI--ETDIYAFGVLILEVACGRKP 527
R E DI++ G++++E+ G P
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 35/279 (12%)
Query: 321 FNPKNKLGKGGFGTVYKGI--WRNKEIAVKRVS-ETSRQGKQEFIAEVTTIGSLRHRNLV 377
F K+GKG FG V+KGI K +A+K + E + ++ E+T + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
K G + ++ EY+ GS D GP L+ + +++ + LDY
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSA-----LDLLEPGP----LDETQIATILREILKGLDY 134
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH SEK++ HRDIK++N++L +L DFG+A + + T GTP +MAP
Sbjct: 135 LH--SEKKI-HRDIKAANVLLSEHGEVKLADFGVAGQLTD---TQIKRNXFVGTPFWMAP 188
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAA 557
E + DI++ G+ +E+A G P ++ L ++ I
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGEPPHSE-------------LHPMKVLFLIPKNN 235
Query: 558 DSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQ 596
L G +S+ E V AC + P RP+ K +L+
Sbjct: 236 PPTLEGNYSKPLKEFV----EACLNKEPSFRPTAKELLK 270
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------ 111
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +T
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT---- 164
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
E+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 165 -ELCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 214
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 113/222 (50%), Gaps = 24/222 (10%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+G+G FG V++GI+ + E +A+K TS +++F+ E T+ H ++VKLI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G E + ++ E G L F+ + +L+ + + S AL YL +
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFL-------QVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
KR +HRDI + N+++ + +LGDFGL+R ++++ T++ + +MAPES
Sbjct: 510 ---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS--TYYKASKGKLPIKWMAPESI 564
Query: 501 LVGRATIETDIYAFGVLILEVAC-GRKPGNQSEQNSYNNSIV 541
R T +D++ FGV + E+ G KP Q NN ++
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKPF----QGVKNNDVI 602
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
K+G+G G V R+ K +AVK++ +Q ++ EV + +H N+V++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
+ +V E++ G+L + + +N E+ +V QAL LH
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVLH---A 188
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ V+HRDIKS +I+L + +L DFG + + + K + GTP +MAPE L+
Sbjct: 189 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPE--LIS 243
Query: 504 RATI--ETDIYAFGVLILEVACGRKP 527
R E DI++ G++++E+ G P
Sbjct: 244 RLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 103/190 (54%), Gaps = 14/190 (7%)
Query: 341 RNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPN 398
R+ +A+K + T RQ +++F++E + +G H N+++L G ++V EYM N
Sbjct: 76 RDVPVAIKALKAGYTERQ-RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMEN 134
Query: 399 GSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIML 458
GSLD F+ + G+ T+ + + ++ G + YL S+ +HRD+ + N+++
Sbjct: 135 GSLDTFL-----RTHDGQFTIM--QLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLV 184
Query: 459 DSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLI 518
DS ++ DFGL+R ++++ +T + APE+ + +D+++FGV++
Sbjct: 185 DSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVM 244
Query: 519 LEV-ACGRKP 527
EV A G +P
Sbjct: 245 WEVLAYGERP 254
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 35/279 (12%)
Query: 321 FNPKNKLGKGGFGTVYKGI--WRNKEIAVKRVS-ETSRQGKQEFIAEVTTIGSLRHRNLV 377
F K+GKG FG V+KGI K +A+K + E + ++ E+T + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
K G + ++ EY+ GS D GP L+ + +++ + LDY
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSA-----LDLLEPGP----LDETQIATILREILKGLDY 119
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH SEK++ HRDIK++N++L +L DFG+A + + T GTP +MAP
Sbjct: 120 LH--SEKKI-HRDIKAANVLLSEHGEVKLADFGVAGQLTD---TQIKRNXFVGTPFWMAP 173
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAA 557
E + DI++ G+ +E+A G P ++ L ++ I
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPHSE-------------LHPMKVLFLIPKNN 220
Query: 558 DSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQ 596
L G +S+ E V AC + P RP+ K +L+
Sbjct: 221 PPTLEGNYSKPLKEFV----EACLNKEPSFRPTAKELLK 255
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 110/211 (52%), Gaps = 25/211 (11%)
Query: 327 LGKGGFGTVYK----GIWRNK---EIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG G FG V + G+ + ++AVK + T+ ++E ++E+ + L +H N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIF------YDETNSGPGEVTLNWEKRLSVIHGT 431
L+G C L++ EY G L F+ D+ + P E+ ++H +
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR-------DLLHFS 158
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGT 491
SQ + + K +HRD+ + N++L + A++GDFGLAR I + +++ K A
Sbjct: 159 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND--SNYIVKGNARL 216
Query: 492 P-GYMAPESFLVGRATIETDIYAFGVLILEV 521
P +MAPES T+++D++++G+L+ E+
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 35/279 (12%)
Query: 321 FNPKNKLGKGGFGTVYKGI--WRNKEIAVKRVS-ETSRQGKQEFIAEVTTIGSLRHRNLV 377
F K+GKG FG V+KGI K +A+K + E + ++ E+T + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
K G + ++ EY+ GS D GP L+ + +++ + LDY
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSA-----LDLLEPGP----LDETQIATILREILKGLDY 119
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH SEK++ HRDIK++N++L +L DFG+A + + T GTP +MAP
Sbjct: 120 LH--SEKKI-HRDIKAANVLLSEHGEVKLADFGVAGQLTD---TQIKRNTFVGTPFWMAP 173
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAA 557
E + DI++ G+ +E+A G P ++ L ++ I
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPHSE-------------LHPMKVLFLIPKNN 220
Query: 558 DSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQ 596
L G +S+ E V AC + P RP+ K +L+
Sbjct: 221 PPTLEGNYSKPLKEFV----EACLNKEPSFRPTAKELLK 255
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 136/295 (46%), Gaps = 47/295 (15%)
Query: 324 KNKLGKGGFGTVYKGIWRNK----EIAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRNLV 377
++ +G+G FG V K + + A+KR+ E S+ ++F E+ + L H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYD---ETN-----SGPGEVTLNWEKRLSVIH 429
L+G C R L EY P+G+L F+ ET+ + TL+ ++ L
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 430 GTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA 489
++ +DYL S+K+ +HR++ + NI++ + A++ DFGL+R + +K K +
Sbjct: 147 DVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVK-----KTMG 198
Query: 490 GTP-GYMAPESFLVGRATIETDIYAFGVLILE-VACGRKPGNQSEQNSYNNSIVHWLWEL 547
P +MA ES T +D++++GVL+ E V+ G P Y L+E
Sbjct: 199 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP--------YCGMTCAELYEK 250
Query: 548 RRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVLS 599
+G L EK + C V L C P+ RPS +L L+
Sbjct: 251 LPQGYRL------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 293
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 114
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ T E+ T
Sbjct: 115 GLSFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVV-TLW 168
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 110/211 (52%), Gaps = 25/211 (11%)
Query: 327 LGKGGFGTVYK----GIWRNK---EIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG G FG V + G+ + ++AVK + T+ ++E ++E+ + L +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIF------YDETNSGPGEVTLNWEKRLSVIHGT 431
L+G C L++ EY G L F+ D+ + P E+ ++H +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR-------DLLHFS 166
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGT 491
SQ + + K +HRD+ + N++L + A++GDFGLAR I + +++ K A
Sbjct: 167 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND--SNYIVKGNARL 224
Query: 492 P-GYMAPESFLVGRATIETDIYAFGVLILEV 521
P +MAPES T+++D++++G+L+ E+
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 118/231 (51%), Gaps = 28/231 (12%)
Query: 301 GTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVY------KGIWRNKEIAVKRVS-ET 353
T + P F + LK+ LG+G FG V +G +++AVK + E+
Sbjct: 10 ATEVDPTHFEKRFLKRI-------RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES 62
Query: 354 SRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER--HDFLLVYEYMPNGSLDKFIFYDETN 411
+ E+ + +L H N+VK G C E + L+ E++P+GSL +++ ++
Sbjct: 63 GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK 122
Query: 412 SGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGL 471
+N +++L + +DYL GS + V HRD+ + N++++SE ++GDFGL
Sbjct: 123 -------INLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAARNVLVESEHQVKIGDFGL 172
Query: 472 ARTIQENLKTHHSTKEIAGTPGY-MAPESFLVGRATIETDIYAFGVLILEV 521
+ I+ + K + K+ +P + APE + + I +D+++FGV + E+
Sbjct: 173 TKAIETD-KEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 222
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 112/210 (53%), Gaps = 19/210 (9%)
Query: 327 LGKGGFGTVYKGIWR---NKEI--AVKRV-SETSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+G G FG V G + +EI A+K + S + + +++F++E + +G H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G + +++ E+M NGSLD F+ N G V + + ++ G + + YL
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVI----QLVGMLRGIAAGMKYL-- 151
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG--YMAPE 498
++ +HRD+ + NI+++S ++ DFGL+R ++++ T + G + APE
Sbjct: 152 -ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 499 SFLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ + T +D++++G+++ EV + G +P
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 114
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ T E+ T
Sbjct: 115 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVV-TLW 168
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 113
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ T E+ T
Sbjct: 114 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVV-TLW 167
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 26/220 (11%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 114
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ T E+ T
Sbjct: 115 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVV-TLW 168
Query: 494 YMAPESFLVGRATIET--DIYAFGVLILEVACGRK--PGN 529
Y APE L+G T DI++ G + E+ R PG+
Sbjct: 169 YRAPE-ILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 5 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 115
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ T E+ T
Sbjct: 116 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVV-TLW 169
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 113
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ T E+ T
Sbjct: 114 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVV-TLW 167
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 114
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ T E+ T
Sbjct: 115 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVV-TLW 168
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 8 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 118
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ T E+ T
Sbjct: 119 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVV-TLW 172
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 11 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 121
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ T E+ T
Sbjct: 122 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVV-TLW 175
Query: 494 YMAPESFLVGR-ATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + + DI++ G + E+ R PG+
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 11 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 121
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ T E+ T
Sbjct: 122 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVV-TLW 175
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 22/212 (10%)
Query: 326 KLGKGGFGTVYKGIW-----RNKEIAVKRVSE---TSRQGKQEFIAEVTTIGSLRHRNLV 377
KLG G FG V +G W + +AVK + + + +FI EV + SL HRNL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+L G +V E P GSL D G L R +V ++ + Y
Sbjct: 79 RLYG-VVLTPPMKMVTELAPLGSL-----LDRLRKHQGHFLLGTLSRYAV--QVAEGMGY 130
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMA 496
L + KR +HRD+ + N++L + ++GDFGL R + +N H+ +E P + A
Sbjct: 131 LES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-DDHYVMQEHRKVPFAWCA 186
Query: 497 PESFLVGRATIETDIYAFGVLILEV-ACGRKP 527
PES + +D + FGV + E+ G++P
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 112/235 (47%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------ 111
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +T
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT---- 164
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
++ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 165 -DLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 325 NKLGKGGFGTVYKGIW-----RNKEIAVKRVSE---TSRQGKQEFIAEVTTIGSLRHRNL 376
KLG G FG V +G W + +AVK + + + +FI EV + SL HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
++L G +V E P GSL D G L R +V ++ +
Sbjct: 74 IRLYGVVLTP-PMKMVTELAPLGSL-----LDRLRKHQGHFLLGTLSRYAV--QVAEGMG 125
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYM 495
YL + KR +HRD+ + N++L + ++GDFGL R + +N H+ +E P +
Sbjct: 126 YLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-DDHYVMQEHRKVPFAWC 181
Query: 496 APESFLVGRATIETDIYAFGVLILEV-ACGRKP 527
APES + +D + FGV + E+ G++P
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 325 NKLGKGGFGTVYKGIW-----RNKEIAVKRVSE---TSRQGKQEFIAEVTTIGSLRHRNL 376
KLG G FG V +G W + +AVK + + + +FI EV + SL HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
++L G +V E P GSL D G L R +V ++ +
Sbjct: 84 IRLYGVVLTP-PMKMVTELAPLGSL-----LDRLRKHQGHFLLGTLSRYAV--QVAEGMG 135
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYM 495
YL + KR +HRD+ + N++L + ++GDFGL R + +N H+ +E P +
Sbjct: 136 YLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-DDHYVMQEHRKVPFAWC 191
Query: 496 APESFLVGRATIETDIYAFGVLILEV-ACGRKP 527
APES + +D + FGV + E+ G++P
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 38/240 (15%)
Query: 312 KELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAE 364
K+ + A +F LGKG FG VY + R K+ +A+K + ++ + G + + E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLN 420
V LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------- 112
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 113 -----TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
T ++ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 165 T-----DLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 215
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 38/240 (15%)
Query: 312 KELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAE 364
K+ + A +F LGKG FG VY + R K+ +A+K + ++ + G + + E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLN 420
V LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------- 116
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 117 -----TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 168
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
T ++ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 169 T-----DLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 219
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 142/303 (46%), Gaps = 63/303 (20%)
Query: 327 LGKGGFGTVYK----GIWRNK-----EIAVKRV-SETSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V G+ ++K ++AVK + S+ + + + I+E+ + + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPG-----------EVTLNWEKR 424
++ L+G C + ++ EY G+L +++ + PG E L+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYL---QARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 425 LSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHS 484
+S + ++ ++YL + K+ +HRD+ + N+++ + ++ DFGLAR I HH
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI------HHI 203
Query: 485 TKEIAGTPG-----YMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNN 538
T G +MAPE+ T ++D+++FGVL+ E+ G P Y
Sbjct: 204 DXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--------YPG 255
Query: 539 SIVHWLWELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVL 595
V L++L ++G +D K C + ++ C H P RP+ K ++
Sbjct: 256 VPVEELFKLLKEGHRMD------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
Query: 596 QVL 598
+ L
Sbjct: 304 EDL 306
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 327 LGKGGFGTVY------KGIWRNKEIAVKRVS-ETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
LG+G FG V +G +++AVK + E+ + E+ + +L H N+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 380 IGWCYER--HDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G C E + L+ E++P+GSL +++ ++ +N +++L + +DY
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-------INLKQQLKYAVQICKGMDY 129
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-MA 496
L GS + V HRD+ + N++++SE ++GDFGL + I+ + K + K+ +P + A
Sbjct: 130 L--GSRQYV-HRDLAARNVLVESEHQVKIGDFGLTKAIETD-KEXXTVKDDRDSPVFWYA 185
Query: 497 PESFLVGRATIETDIYAFGVLILEV 521
PE + + I +D+++FGV + E+
Sbjct: 186 PECLMQSKFYIASDVWSFGVTLHEL 210
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 325 NKLGKGGFGTVYKGIW-----RNKEIAVKRVSE---TSRQGKQEFIAEVTTIGSLRHRNL 376
KLG G FG V +G W + +AVK + + + +FI EV + SL HRNL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
++L G +V E P GSL D G L R +V ++ +
Sbjct: 78 IRLYGVVLTP-PMKMVTELAPLGSL-----LDRLRKHQGHFLLGTLSRYAV--QVAEGMG 129
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYM 495
YL + KR +HRD+ + N++L + ++GDFGL R + +N H+ +E P +
Sbjct: 130 YLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-DDHYVMQEHRKVPFAWC 185
Query: 496 APESFLVGRATIETDIYAFGVLILEV-ACGRKP 527
APES + +D + FGV + E+ G++P
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 325 NKLGKGGFGTVYKGIW-----RNKEIAVKRVSE---TSRQGKQEFIAEVTTIGSLRHRNL 376
KLG G FG V +G W + +AVK + + + +FI EV + SL HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
++L G +V E P GSL D G L R +V ++ +
Sbjct: 74 IRLYGVVLTP-PMKMVTELAPLGSL-----LDRLRKHQGHFLLGTLSRYAV--QVAEGMG 125
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYM 495
YL + KR +HRD+ + N++L + ++GDFGL R + +N H+ +E P +
Sbjct: 126 YLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-DDHYVMQEHRKVPFAWC 181
Query: 496 APESFLVGRATIETDIYAFGVLILEV-ACGRKP 527
APES + +D + FGV + E+ G++P
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 29/215 (13%)
Query: 327 LGKGGFGTVYK----GIWRNK---EIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG G FG V + G+ + ++AVK + T+ ++E ++E+ + L +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
L+G C L++ EY G L F+ L + ++ + T+ D
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR-------VLETDPAFAIANSTASTRDL 166
Query: 438 LHNGSE----------KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
LH S+ K +HRD+ + N++L + A++GDFGLAR I + +++ K
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND--SNYIVKG 224
Query: 488 IAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
A P +MAPES T+++D++++G+L+ E+
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 38/240 (15%)
Query: 312 KELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAE 364
K+ + A +F LGKG FG VY + R K+ +A+K + ++ + G + + E
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLN 420
V LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------- 111
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 112 -----TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 163
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
T ++ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 164 T-----DLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 214
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNL 376
TG++ K+ + G + +W KE+ ++E KQ ++EV + L+H N+
Sbjct: 15 GTGSYGRCQKIRRKSDGKIL--VW--KELDYGSMTEAE---KQMLVSEVNLLRELKHPNI 67
Query: 377 VKLIGWCYERHD--FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
V+ +R + +V EY G L I T L+ E L V+ + A
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVI----TKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 435 LDYLHNGSE--KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
L H S+ VLHRD+K +N+ LD + N +LGDFGLAR + + K GTP
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF---AKAFVGTP 180
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
YM+PE ++DI++ G L+ E+ C P
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP 214
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 110/235 (46%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G L K +DE +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA------------ 116
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +T
Sbjct: 117 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT---- 169
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 170 -TLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 219
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 25/209 (11%)
Query: 327 LGKGGFGTVYKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
LGKG FG K R + + +K + + ++ F+ EV + L H N++K IG Y
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEK 444
+ + EY+ G+L I ++ W +R+S + + YLH+ +
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQ-------YPWSQRVSFAKDIASGMAYLHSMN-- 128
Query: 445 RVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE---------NLKTHHSTKE--IAGTPG 493
++HRD+ S N ++ N + DFGLAR + + +LK K + G P
Sbjct: 129 -IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 494 YMAPESFLVGRATIE-TDIYAFGVLILEV 521
+MAPE + GR+ E D+++FG+++ E+
Sbjct: 188 WMAPE-MINGRSYDEKVDVFSFGIVLCEI 215
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNL 376
TG++ K+ + G + +W KE+ ++E KQ ++EV + L+H N+
Sbjct: 15 GTGSYGRCQKIRRKSDGKIL--VW--KELDYGSMTEAE---KQMLVSEVNLLRELKHPNI 67
Query: 377 VKLIGWCYERHD--FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
V+ +R + +V EY G L I T L+ E L V+ + A
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVI----TKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 435 LDYLHNGSE--KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
L H S+ VLHRD+K +N+ LD + N +LGDFGLAR + + K GTP
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF---AKTFVGTP 180
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
YM+PE ++DI++ G L+ E+ C P
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVS-ETSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
LG+G FG VY+G++ N + +AVK + + K++F++E + +L H ++VKLI
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G E ++++ E P G L ++ E N K L+++ + Q +
Sbjct: 92 GIIEEEPTWIIM-ELYPYGELGHYL----------ERNKNSLKVLTLVLYSLQICKAMAY 140
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
+HRDI NI++ S +LGDFGL+R I++ S + +M+PES
Sbjct: 141 LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK--WMSPESI 198
Query: 501 LVGRATIETDIYAFGVLILEV-ACGRKP 527
R T +D++ F V + E+ + G++P
Sbjct: 199 NFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 327 LGKGGFGTVYK----GIWRNK---EIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG G FG V + G+ + ++AVK + T+ ++E ++E+ + L +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYD----ETNSGPGEVTLNWEKRLSVIHGTSQ 433
L+G C L++ EY G L F+ ET+ R ++H +SQ
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTR-DLLHFSSQ 172
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP- 492
+ + K +HRD+ + N++L + A++GDFGLAR I + +++ K A P
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND--SNYIVKGNARLPV 230
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEV 521
+MAPES T+++D++++G+L+ E+
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 141/295 (47%), Gaps = 47/295 (15%)
Query: 327 LGKGGFGTVYK----GIWRNK-----EIAVKRV-SETSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V G+ ++K ++AVK + S+ + + + I+E+ + + +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFIF--------YDETNSGPGEVTLNWEKRLSV 427
++ L+G C + ++ EY G+L +++ Y S E L+ + +S
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
+ ++ ++YL + K+ +HRD+ + N+++ + ++ DFGLAR I ++ + T
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH-HIDYYKKTTN 252
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWE 546
+MAPE+ T ++D+++FGVL+ E+ G P Y V L++
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--------YPGVPVEELFK 304
Query: 547 LRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 305 LLKEGHRMD------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 18/233 (7%)
Query: 320 NFNPKNKLGKGGFGTVYKG--IWRNKEIAVKRVSETSRQGK---QEFIAEVTTIGSLRHR 374
+F N LGKG F VY+ I E+A+K + + + Q EV L+H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
++++L + + + LV E NG +++++ + P + + +H
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYL---KNRVKP----FSENEARHFMHQIITG 124
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+ YLH+ +LHRD+ SN++L N ++ DFGLA ++ + H++ + GTP Y
Sbjct: 125 MLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT---LCGTPNY 178
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWEL 547
++PE +E+D+++ G + + GR P + + N +V +E+
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM 231
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 32 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------ 137
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +T
Sbjct: 138 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT---- 190
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 191 -TLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 240
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVS-ETSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
LG+G FG VY+G++ N + +AVK + + K++F++E + +L H ++VKLI
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G E ++++ E P G L ++ E N K L+++ + Q +
Sbjct: 80 GIIEEEPTWIIM-ELYPYGELGHYL----------ERNKNSLKVLTLVLYSLQICKAMAY 128
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
+HRDI NI++ S +LGDFGL+R I++ S + +M+PES
Sbjct: 129 LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK--WMSPESI 186
Query: 501 LVGRATIETDIYAFGVLILEV-ACGRKP 527
R T +D++ F V + E+ + G++P
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 22/209 (10%)
Query: 327 LGKGGFGTVYKGIWRNKE-----IAVKRVS-ETSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
LG+G FG VY+G++ N + +AVK + + K++F++E + +L H ++VKLI
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G E ++++ E P G L ++ E N K L+++ + Q +
Sbjct: 76 GIIEEEPTWIIM-ELYPYGELGHYL----------ERNKNSLKVLTLVLYSLQICKAMAY 124
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPES 499
+HRDI NI++ S +LGDFGL+R I++ + + P +M+PES
Sbjct: 125 LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE---DYYKASVTRLPIKWMSPES 181
Query: 500 FLVGRATIETDIYAFGVLILEV-ACGRKP 527
R T +D++ F V + E+ + G++P
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 140/296 (47%), Gaps = 49/296 (16%)
Query: 327 LGKGGFGTVYK----GIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V GI ++K +AVK + + + + + ++E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI---------FYDETNSGPGEVTLNWEKRLS 426
++ L+G C + ++ EY G+L +++ + + N P E + ++ +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-QMTFKDLVS 161
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+ ++ ++YL + ++ +HRD+ + N+++ R+ DFGLAR I N+ + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDIN-NIDYYKKTT 217
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLW 545
+MAPE+ T ++D+++FGVL+ E+ G P Y V L+
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------YPGIPVEELF 269
Query: 546 ELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
+L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 270 KLLKEGHRMD------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 34/233 (14%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE--IAVKRV--SETSRQG-KQEFIAEVTTIGSL 371
A +F LGKG FG VY + ++ +A+K + ++ + G + + EV L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 372 RHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRLSV 427
RH N+++L G+ ++ L+ EY P G+ L K +DE + +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------TY 110
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +T
Sbjct: 111 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-----T 162
Query: 488 IAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 163 LCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 211
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 38/240 (15%)
Query: 312 KELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAE 364
K+ + A +F LGKG FG VY + R K+ +A+K + ++ + G + + E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLN 420
V LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------- 114
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 115 -----TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 166
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
T + GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 167 T-----TLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 217
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 38/240 (15%)
Query: 312 KELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAE 364
K+ + A +F LGKG FG VY + R K+ +A+K + ++ + G + + E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLN 420
V LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------- 116
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 117 -----TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 168
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
T + GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 169 T-----TLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 219
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 38/240 (15%)
Query: 312 KELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAE 364
K+ + A +F LGKG FG VY + R K+ +A+K + ++ + G + + E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLN 420
V LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------- 112
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 113 -----TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR 164
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
T ++GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 165 T-----TLSGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 215
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 141/295 (47%), Gaps = 47/295 (15%)
Query: 327 LGKGGFGTVYK----GIWRNK-----EIAVKRV-SETSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V G+ ++K ++AVK + S+ + + + I+E+ + + +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI--------FYDETNSGPGEVTLNWEKRLSV 427
++ L+G C + ++ EY G+L +++ Y S E L+ + +S
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
+ ++ ++YL + K+ +HRD+ + N+++ + ++ DFGLAR I ++ + T
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH-HIDYYKKTTN 203
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWE 546
+MAPE+ T ++D+++FGVL+ E+ G P Y V L++
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--------YPGVPVEELFK 255
Query: 547 LRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 256 LLKEGHRMD------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 141/295 (47%), Gaps = 47/295 (15%)
Query: 327 LGKGGFGTVYK----GIWRNK-----EIAVKRV-SETSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V G+ ++K ++AVK + S+ + + + I+E+ + + +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFIF--------YDETNSGPGEVTLNWEKRLSV 427
++ L+G C + ++ EY G+L +++ Y S E L+ + +S
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
+ ++ ++YL + K+ +HRD+ + N+++ + ++ DFGLAR I ++ + T
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH-HIDYYKKTTN 200
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWE 546
+MAPE+ T ++D+++FGVL+ E+ G P Y V L++
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--------YPGVPVEELFK 252
Query: 547 LRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 253 LLKEGHRMD------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 141/295 (47%), Gaps = 47/295 (15%)
Query: 327 LGKGGFGTVYK----GIWRNK-----EIAVKRV-SETSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V G+ ++K ++AVK + S+ + + + I+E+ + + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFIF--------YDETNSGPGEVTLNWEKRLSV 427
++ L+G C + ++ EY G+L +++ Y S E L+ + +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
+ ++ ++YL + K+ +HRD+ + N+++ + ++ DFGLAR I ++ + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH-HIDYYKKTTN 211
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWE 546
+MAPE+ T ++D+++FGVL+ E+ G P Y V L++
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--------YPGVPVEELFK 263
Query: 547 LRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 264 LLKEGHRMD------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 5 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------ 110
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +T
Sbjct: 111 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT---- 163
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 164 -TLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 213
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 141/295 (47%), Gaps = 47/295 (15%)
Query: 327 LGKGGFGTVYK----GIWRNK-----EIAVKRV-SETSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V G+ ++K ++AVK + S+ + + + I+E+ + + +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI--------FYDETNSGPGEVTLNWEKRLSV 427
++ L+G C + ++ EY G+L +++ Y S E L+ + +S
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
+ ++ ++YL + K+ +HRD+ + N+++ + ++ DFGLAR I ++ + T
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH-HIDYYKKTTN 204
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWE 546
+MAPE+ T ++D+++FGVL+ E+ G P Y V L++
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--------YPGVPVEELFK 256
Query: 547 LRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 257 LLKEGHRMD------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 325 NKLGKGGFGTVYKGIW-----RNKEIAVKRVSE---TSRQGKQEFIAEVTTIGSLRHRNL 376
KLG G FG V +G W + +AVK + + + +FI EV + SL HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
++L G +V E P GSL D G L R +V ++ +
Sbjct: 74 IRLYGVVLTP-PMKMVTELAPLGSL-----LDRLRKHQGHFLLGTLSRYAV--QVAEGMG 125
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYM 495
YL + KR +HRD+ + N++L + ++GDFGL R + +N H +E P +
Sbjct: 126 YLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-DDHXVMQEHRKVPFAWC 181
Query: 496 APESFLVGRATIETDIYAFGVLILEV-ACGRKP 527
APES + +D + FGV + E+ G++P
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 23 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 80
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------ 128
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +T
Sbjct: 129 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT---- 181
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 182 -TLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 231
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 141/295 (47%), Gaps = 47/295 (15%)
Query: 327 LGKGGFGTVYK----GIWRNK-----EIAVKRV-SETSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V G+ ++K ++AVK + S+ + + + I+E+ + + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFIF--------YDETNSGPGEVTLNWEKRLSV 427
++ L+G C + ++ EY G+L +++ Y S E L+ + +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
+ ++ ++YL + K+ +HRD+ + N+++ + ++ DFGLAR I ++ + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH-HIDYYKKTTN 211
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLWE 546
+MAPE+ T ++D+++FGVL+ E+ G P Y V L++
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--------YPGVPVEELFK 263
Query: 547 LRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 264 LLKEGHRMD------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------ 111
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +T
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT---- 164
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 165 -XLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 214
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 10 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------ 115
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +T
Sbjct: 116 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT---- 168
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 169 -TLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 218
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------ 111
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +T
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT---- 164
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 165 -TLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 214
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 325 NKLGKGGFGTVYKGIW-----RNKEIAVKRVSE---TSRQGKQEFIAEVTTIGSLRHRNL 376
KLG G FG V +G W + +AVK + + + +FI EV + SL HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
++L G +V E P GSL D G L R +V ++ +
Sbjct: 84 IRLYGVVLT-PPMKMVTELAPLGSL-----LDRLRKHQGHFLLGTLSRYAV--QVAEGMG 135
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYM 495
YL + KR +HRD+ + N++L + ++GDFGL R + +N H +E P +
Sbjct: 136 YLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-DDHXVMQEHRKVPFAWC 191
Query: 496 APESFLVGRATIETDIYAFGVLILEV-ACGRKP 527
APES + +D + FGV + E+ G++P
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 38/240 (15%)
Query: 312 KELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAE 364
K+ + A +F LGKG FG VY + R K+ +A+K + ++ + G + + E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLN 420
V LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------- 114
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 115 -----TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 166
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
T + GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 167 T-----TLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 217
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 114
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 115 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 168
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 114
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 115 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 168
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 113
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 114 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 167
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 7 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 117
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 118 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 171
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 114
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 115 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 168
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 7 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 117
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 118 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 171
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 6 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 116
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 117 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 170
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 142/298 (47%), Gaps = 53/298 (17%)
Query: 327 LGKGGFGTVYK----GIWRNK-----EIAVKRV-SETSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V G+ ++K ++AVK + S+ + + + I+E+ + + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPG-----------EVTLNWEKR 424
++ L+G C + ++ EY G+L +++ + PG E L+ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYL---QARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 425 LSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHS 484
+S + ++ ++YL + K+ +HRD+ + N+++ + ++ DFGLAR I ++ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH-HIDYYKK 208
Query: 485 TKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHW 543
T +MAPE+ T ++D+++FGVL+ E+ G P Y V
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--------YPGVPVEE 260
Query: 544 LWELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
L++L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 261 LFKLLKEGHRMD------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 6 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 116
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 117 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 170
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 20/206 (9%)
Query: 325 NKLGKGGFGTV----YKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVK 378
++LGKG FG+V Y + N +AVK++ + +++F E+ + +L +VK
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 379 LIGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
G Y R LV EY+P+G L F+ L+ + L + ++
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-------LDASRLLLYSSQICKGME 129
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-M 495
YL +R +HRD+ + NI+++SE + ++ DFGLA+ + + K ++ +E +P +
Sbjct: 130 YL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-KDYYVVREPGQSPIFWY 185
Query: 496 APESFLVGRATIETDIYAFGVLILEV 521
APES + ++D+++FGV++ E+
Sbjct: 186 APESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 20/206 (9%)
Query: 325 NKLGKGGFGTV----YKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVK 378
++LGKG FG+V Y + N +AVK++ + +++F E+ + +L +VK
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 379 LIGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
G Y R LV EY+P+G L F+ L+ + L + ++
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-------LDASRLLLYSSQICKGME 128
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-M 495
YL +R +HRD+ + NI+++SE + ++ DFGLA+ + + K ++ +E +P +
Sbjct: 129 YL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-KDYYVVREPGQSPIFWY 184
Query: 496 APESFLVGRATIETDIYAFGVLILEV 521
APES + ++D+++FGV++ E+
Sbjct: 185 APESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 113
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 114 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 167
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 141/296 (47%), Gaps = 49/296 (16%)
Query: 327 LGKGGFGTVYK----GIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V GI ++K +AVK + + + + + ++E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI---------FYDETNSGPGEVTLNWEKRLS 426
++ L+G C + ++ EY G+L +++ + + N P E + ++ +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-QMTFKDLVS 161
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+ ++ ++YL + ++ +HRD+ + N+++ ++ DFGLAR I N+ + +T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKNTT 217
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLW 545
+MAPE+ T ++D+++FGVL+ E+ G P Y V L+
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------YPGIPVEELF 269
Query: 546 ELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
+L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 270 KLLKEGHRMD------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 5 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 115
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 116 GLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 169
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 141/295 (47%), Gaps = 47/295 (15%)
Query: 327 LGKGGFGTVYK----GIWRNK-----EIAVKRV-SETSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V G+ ++K ++AVK + S+ + + + I+E+ + + +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPG-----------EVTLNWEKR 424
++ L+G C + ++ EY G+L +++ + PG E L+ +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYL---QARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 425 LSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHS 484
+S + ++ ++YL + K+ +HRD+ + N+++ + ++ DFGLAR I ++ +
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH-HIDYYKK 193
Query: 485 TKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHW 543
T +MAPE+ T ++D+++FGVL+ E+ G P Y V
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--------YPGVPVEE 245
Query: 544 LWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
L++L ++G +D S E ++ C H P RP+ K +++ L
Sbjct: 246 LFKLLKEGHRMDKP-SNCTNEL--------YMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 132/297 (44%), Gaps = 53/297 (17%)
Query: 312 KELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAE 364
K+ + A +F LGKG FG VY + R K+ +A+K + ++ + G + + E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLN 420
V LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------- 116
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 117 -----TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 168
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
T + GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 169 T-----TLCGTLDYLPPEX-IEGRXHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 219
Query: 540 IVHWLWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQ 596
RI SR+ F + E L NP RP ++ VL+
Sbjct: 220 Y----------KRI-----SRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 8 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 118
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 119 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 172
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWR--NKEIAVK-----RVSETSRQGKQEFIAEVTTIGSL 371
G++ + LG G FG V G + ++AVK ++ GK + E+ +
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKLF 68
Query: 372 RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGT 431
RH +++KL DF +V EY+ G L +I G V +RL
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI------CKHGRVEEMEARRL--FQQI 120
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGT 491
A+DY H V+HRD+K N++LD+ NA++ DFGL+ + + ++ G+
Sbjct: 121 LSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG----EFLRDSCGS 173
Query: 492 PGYMAPESFLVGR--ATIETDIYAFGVLILEVACGRKP 527
P Y APE + GR A E DI++ GV++ + CG P
Sbjct: 174 PNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 6 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 116
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 117 GLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 170
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 5 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 115
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 116 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 169
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+ ++ +T +G I E++ + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 114
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ T E+ T
Sbjct: 115 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVV-TLW 168
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+ ++ +T +G I E++ + L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 113
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ T E+ T
Sbjct: 114 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVV-TLW 167
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 114
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 115 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 168
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 5 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 115
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 116 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 169
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 20/206 (9%)
Query: 325 NKLGKGGFGTV----YKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVK 378
++LGKG FG+V Y + N +AVK++ + +++F E+ + +L +VK
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 379 LIGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
G Y R LV EY+P+G L F+ L+ + L + ++
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-------LDASRLLLYSSQICKGME 141
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-M 495
YL +R +HRD+ + NI+++SE + ++ DFGLA+ + + K ++ +E +P +
Sbjct: 142 YL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-KDYYVVREPGQSPIFWY 197
Query: 496 APESFLVGRATIETDIYAFGVLILEV 521
APES + ++D+++FGV++ E+
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRN--KEIAVKRV-SETSRQGKQEFIAEVTTIGSLR 372
+ G + K +LG GGFG V + I ++ +++A+K+ E S + ++ + E+ + L
Sbjct: 12 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 71
Query: 373 HRNLV----------KLIGWCYERHDF-LLVYEYMPNGSLDKFIFYDETNSGPGEVTLNW 421
H N+V KL +D LL EY G L K++ E G E +
Sbjct: 72 HPNVVSAREVPDGLQKLAP-----NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR- 125
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD---SEFNARLGDFGLARTIQEN 478
+++ S AL YLH E R++HRD+K NI+L ++ D G A+ + +
Sbjct: 126 ----TLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG 178
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
E GT Y+APE + T+ D ++FG L E G +P
Sbjct: 179 ----ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 140/296 (47%), Gaps = 49/296 (16%)
Query: 327 LGKGGFGTVYK----GIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V GI ++K +AVK + + + + + ++E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI---------FYDETNSGPGEVTLNWEKRLS 426
++ L+G C + ++ EY G+L +++ + + N P E + ++ +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-QMTFKDLVS 161
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+ ++ ++YL + ++ +HRD+ + N+++ ++ DFGLAR I N+ + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTT 217
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLW 545
+MAPE+ T ++D+++FGVL+ E+ G P Y V L+
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------YPGIPVEELF 269
Query: 546 ELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
+L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 270 KLLKEGHRMD------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 7 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLL------Q 117
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 118 GLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 171
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 32 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------ 137
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 138 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD---- 190
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
++ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 191 -DLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 240
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRN--KEIAVKRV-SETSRQGKQEFIAEVTTIGSLR 372
+ G + K +LG GGFG V + I ++ +++A+K+ E S + ++ + E+ + L
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 70
Query: 373 HRNLV----------KLIGWCYERHDF-LLVYEYMPNGSLDKFIFYDETNSGPGEVTLNW 421
H N+V KL +D LL EY G L K++ E G E +
Sbjct: 71 HPNVVSAREVPDGLQKLAP-----NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR- 124
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD---SEFNARLGDFGLARTIQEN 478
+++ S AL YLH E R++HRD+K NI+L ++ D G A+ + +
Sbjct: 125 ----TLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG 177
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
E GT Y+APE + T+ D ++FG L E G +P
Sbjct: 178 ----ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 34/231 (14%)
Query: 315 KKATGNFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGKQEFIAEVTTIGS-- 370
K+ ++PK+ +G+G V + + R E AVK + T+ + E + EV
Sbjct: 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRE 149
Query: 371 ---LR----HRNLVKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWE 422
LR H +++ LI YE F+ LV++ M G L F + E +V L+ +
Sbjct: 150 THILRQVAGHPHIITLID-SYESSSFMFLVFDLMRKGEL--FDYLTE------KVALSEK 200
Query: 423 KRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTH 482
+ S++ +A+ +LH + ++HRD+K NI+LD RL DFG + ++ K
Sbjct: 201 ETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK-- 255
Query: 483 HSTKEIAGTPGYMAPESFLVGRATI------ETDIYAFGVLILEVACGRKP 527
+E+ GTPGY+APE E D++A GV++ + G P
Sbjct: 256 --LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 34/233 (14%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE--IAVKRV--SETSRQG-KQEFIAEVTTIGSL 371
A +F LGKG FG VY +N + +A+K + ++ + G + + EV L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 372 RHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRLSV 427
RH N+++L G+ ++ L+ EY P G+ L K +DE + +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------TY 113
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
I + AL Y H+ K+V+HRDIK N++L S ++ DFG + + +
Sbjct: 114 ITELANALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-----A 165
Query: 488 IAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y ++
Sbjct: 166 LCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQDT 214
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 7 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ S+D F D S + L K S + Q
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDA--SALTGIPLPLIK--SYLFQLLQ 117
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 118 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 171
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 110/217 (50%), Gaps = 24/217 (11%)
Query: 327 LGKGGFGTVYK----GIWRNK---EIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG G FG V + G+ + ++AVK + T+ ++E ++E+ + L +H N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDE-----TNSGPGEVTLNWEKR-------L 425
L+G C L++ EY G L F+ + PG+ +K
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
++H +SQ + + K +HRD+ + N++L + A++GDFGLAR I + +++
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND--SNYIV 216
Query: 486 KEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
K A P +MAPES T+++D++++G+L+ E+
Sbjct: 217 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 253
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 5 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLL------Q 115
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 116 GLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 169
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 6 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ S+D F D S + L K S + Q
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDA--SALTGIPLPLIK--SYLFQLLQ 116
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 117 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 170
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 140/296 (47%), Gaps = 49/296 (16%)
Query: 327 LGKGGFGTVYK----GIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V GI ++K +AVK + + + + + ++E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI---------FYDETNSGPGEVTLNWEKRLS 426
++ L+G C + ++ EY G+L +++ + + N P E + ++ +S
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-QMTFKDLVS 161
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+ ++ ++YL + ++ +HRD+ + N+++ ++ DFGLAR I N+ + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTT 217
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLW 545
+MAPE+ T ++D+++FGVL+ E+ G P Y V L+
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------YPGIPVEELF 269
Query: 546 ELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
+L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 270 KLLKEGHRMD------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 31/218 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQG---KQEFIAEVTTIGSLRHR 374
+F+ LGKG FG VY R + +A+K + +T + + + EV LRH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRLSVIHG 430
N+++L G+ ++ L+ EY P G+ L K +DE + + I
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA------------TYITE 120
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAG 490
+ AL Y H+ KRV+HRDIK N++L S ++ DFG + + +T + G
Sbjct: 121 LANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRT-----TLCG 172
Query: 491 TPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKP 527
T Y+ PE + GR E D+++ GVL E G P
Sbjct: 173 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------ 114
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 115 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD---- 167
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
++ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 168 -DLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 217
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 41/222 (18%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAE--VTTIGSLRHRNLVKLIGWCY 384
+G+G +G VYKG + +AVK S +RQ FI E + + + H N+ + I
Sbjct: 21 IGRGRYGAVYKGSLDERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 385 E-----RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
R ++LLV EY PNGSL K++ T +W + H ++ L YLH
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYLSLH---------TSDWVSSCRLAHSVTRGLAYLH 128
Query: 440 ------NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLA------RTIQENLKTHHSTKE 487
+ + + HRD+ S N+++ ++ + DFGL+ R ++ + + + E
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 488 IAGTPGYMAPESFLVGRATI--------ETDIYAFGVLILEV 521
+ GT YMAPE L G + + D+YA G++ E+
Sbjct: 189 V-GTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 140/296 (47%), Gaps = 49/296 (16%)
Query: 327 LGKGGFGTVYK----GIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V GI ++K +AVK + + + + + ++E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI---------FYDETNSGPGEVTLNWEKRLS 426
++ L+G C + ++ EY G+L +++ + + N P E + ++ +S
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-QMTFKDLVS 161
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+ ++ ++YL + ++ +HRD+ + N+++ ++ DFGLAR I N+ + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTT 217
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLW 545
+MAPE+ T ++D+++FGVL+ E+ G P Y V L+
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------YPGIPVEELF 269
Query: 546 ELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
+L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 270 KLLKEGHRMD------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 111/210 (52%), Gaps = 19/210 (9%)
Query: 327 LGKGGFGTVYKGIWR---NKEI--AVKRV-SETSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+G G FG V G + +EI A+K + S + + +++F++E + +G H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G + +++ E+M NGSLD F+ N G V + + ++ G + + YL
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVI----QLVGMLRGIAAGMKYL-- 125
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG--YMAPE 498
++ +HR + + NI+++S ++ DFGL+R ++++ T + G + APE
Sbjct: 126 -ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 499 SFLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ + T +D++++G+++ EV + G +P
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWR--NKEIAVK-----RVSETSRQGKQEFIAEVTTIGSL 371
G++ + LG G FG V G + ++AVK ++ GK + E+ +
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKLF 68
Query: 372 RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGT 431
RH +++KL DF +V EY+ G L +I G V +RL
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI------CKHGRVEEMEARRL--FQQI 120
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQ--ENLKTHHSTKEIA 489
A+DY H V+HRD+K N++LD+ NA++ DFGL+ + E L+T
Sbjct: 121 LSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS------C 171
Query: 490 GTPGYMAPESFLVGR--ATIETDIYAFGVLILEVACGRKP 527
G+P Y APE + GR A E DI++ GV++ + CG P
Sbjct: 172 GSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 139/296 (46%), Gaps = 49/296 (16%)
Query: 327 LGKGGFGTVYK----GIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V GI ++K +AVK + + + + + ++E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI---------FYDETNSGPGEVTLNWEKRLS 426
++ L+G C + ++ EY G+L +++ + + N P E + ++ +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-QMTFKDLVS 161
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+ ++ ++YL + ++ +HRD+ + N+++ ++ DFGLAR I N+ T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDXXKKTT 217
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLW 545
+MAPE+ T ++D+++FGVL+ E+ G P Y V L+
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------YPGIPVEELF 269
Query: 546 ELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
+L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 270 KLLKEGHRMD------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 327 LGKGGFGTVYKGIWR--NKEIAVKRVSETSRQ---GKQEFIAEVTTIGSLRHRNLVKLIG 381
LG+GGFG V+ + K A K++++ + G Q + E + + R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIF-YDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ D LV M G + I+ DE N G E I T+Q + L +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP--------RAIFYTAQIVSGLEH 304
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
++ +++RD+K N++LD + N R+ D GLA ++ TK AGTPG+MAPE
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAGTPGFMAPELL 361
Query: 501 LVGRATIETDIYAFGVLILEVACGRKP 527
L D +A GV + E+ R P
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 3 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L F+ P + ++ +L Q
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLL------Q 113
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ T E+ T
Sbjct: 114 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVV-TLW 167
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 327 LGKGGFGTVYKGIWR--NKEIAVKRVSETSRQ---GKQEFIAEVTTIGSLRHRNLVKLIG 381
LG+GGFG V+ + K A K++++ + G Q + E + + R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIF-YDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ D LV M G + I+ DE N G E I T+Q + L +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP--------RAIFYTAQIVSGLEH 304
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
++ +++RD+K N++LD + N R+ D GLA ++ TK AGTPG+MAPE
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAGTPGFMAPELL 361
Query: 501 LVGRATIETDIYAFGVLILEVACGRKP 527
L D +A GV + E+ R P
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 7 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L KF+ P + ++ +L Q
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLL------Q 117
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 118 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 171
Query: 494 YMAPESFLVGR-ATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + + DI++ G + E+ R PG+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 327 LGKGGFGTVYKGIWR--NKEIAVKRVSETSRQ---GKQEFIAEVTTIGSLRHRNLVKLIG 381
LG+GGFG V+ + K A K++++ + G Q + E + + R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIF-YDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ D LV M G + I+ DE N G E I T+Q + L +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP--------RAIFYTAQIVSGLEH 304
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
++ +++RD+K N++LD + N R+ D GLA ++ TK AGTPG+MAPE
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAGTPGFMAPELL 361
Query: 501 LVGRATIETDIYAFGVLILEVACGRKP 527
L D +A GV + E+ R P
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 138/305 (45%), Gaps = 40/305 (13%)
Query: 307 KKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW-------RNKEIAVKRVSETSRQG-K 358
K+ +LKE+ + F +LG+ FG VYKG + + +A+K + + + +
Sbjct: 16 KQAKLKEISLSAVRF--MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT 418
+EF E L+H N+V L+G + +++ Y +G L +F+ +S G
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 419 LNWEKRLSV-----IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR 473
+ + ++ +H +Q + S V+H+D+ + N+++ + N ++ D GL R
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 193
Query: 474 TIQENLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSE 532
+ ++ + P +MAPE+ + G+ +I++DI+++GV++ EV G Q
Sbjct: 194 EVYA--ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY---GLQPY 248
Query: 533 QNSYNNSIVHWLWELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRP 589
N +V E+ R ++L D +C V L + C + P RP
Sbjct: 249 CGYSNQDVV----EMIRNRQVLPCPD------------DCPAWVYALMIECWNEFPSRRP 292
Query: 590 SMKTV 594
K +
Sbjct: 293 RFKDI 297
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 325 NKLGKGGFGTVYKGIWR--NKEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
++G+G FG V+ G R N +AVK ET K +F+ E + H N+V+LIG
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C ++ +V E + G F+ + L + L ++ + ++YL +
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGAR-------LRVKTLLQMVGDAAAGMEYLES- 231
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESF 500
K +HRD+ + N ++ + ++ DFG++R +E + ++ + P + APE+
Sbjct: 232 --KCCIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEAL 287
Query: 501 LVGRATIETDIYAFGVLILE 520
GR + E+D+++FG+L+ E
Sbjct: 288 NYGRYSSESDVWSFGILLWE 307
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 109/235 (46%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G L K +DE +
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA------------ 116
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 117 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX---- 169
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 170 -XLXGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 219
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 327 LGKGGFGTVYKGIWR--NKEIAVKRVSETSRQ---GKQEFIAEVTTIGSLRHRNLVKLIG 381
LG+GGFG V+ + K A K++++ + G Q + E + + R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIF-YDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ D LV M G + I+ DE N G E I T+Q + L +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP--------RAIFYTAQIVSGLEH 304
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
++ +++RD+K N++LD + N R+ D GLA ++ TK AGTPG+MAPE
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAGTPGFMAPELL 361
Query: 501 LVGRATIETDIYAFGVLILEVACGRKP 527
L D +A GV + E+ R P
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------ 114
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 115 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA---- 167
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 168 -ALCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 217
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------ 111
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA---- 164
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 165 -ALCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 319 GNFNPKNKLGKGGFGTV--YKGIWRNKEIAVKRVSETSRQGK--QEFIAEVTTIGSLRHR 374
GN+ +GKG F V + I KE+AVK + +T Q+ EV + L H
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
N+VKL LV EY G + ++ V W K Q
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL-----------VAHGWMKEKEARAKFRQI 115
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR--TIQENLKTHHSTKEIAGTP 492
+ + +K ++HRD+K+ N++LD++ N ++ DFG + T L T G+P
Sbjct: 116 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT------FCGSP 169
Query: 493 GYMAPESFLVGRAT-IETDIYAFGVLILEVACGRKP 527
Y APE F + E D+++ GV++ + G P
Sbjct: 170 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 8 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------ 113
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 114 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX---- 166
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 167 -XLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 216
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 140/296 (47%), Gaps = 49/296 (16%)
Query: 327 LGKGGFGTVYK----GIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V GI ++K +AVK + + + + + ++E+ + + +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI---------FYDETNSGPGEVTLNWEKRLS 426
++ L+G C + ++ EY G+L +++ + + N P E + ++ +S
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-QMTFKDLVS 153
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+ ++ ++YL + ++ +HRD+ + N+++ ++ DFGLAR I N+ + T
Sbjct: 154 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTT 209
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLW 545
+MAPE+ T ++D+++FGVL+ E+ G P Y V L+
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------YPGIPVEELF 261
Query: 546 ELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
+L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 262 KLLKEGHRMD------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 305
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 140/296 (47%), Gaps = 49/296 (16%)
Query: 327 LGKGGFGTVYK----GIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V GI ++K +AVK + + + + + ++E+ + + +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI---------FYDETNSGPGEVTLNWEKRLS 426
++ L+G C + ++ EY G+L +++ + + N P E + ++ +S
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-QMTFKDLVS 150
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+ ++ ++YL + ++ +HRD+ + N+++ ++ DFGLAR I N+ + T
Sbjct: 151 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTT 206
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLW 545
+MAPE+ T ++D+++FGVL+ E+ G P Y V L+
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------YPGIPVEELF 258
Query: 546 ELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
+L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 259 KLLKEGHRMD------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 302
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 38/240 (15%)
Query: 312 KELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAE 364
K+ + A +F LGKG FG VY + R K+ +A+K + ++ + G + + E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLN 420
V LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------- 113
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
+ I + AL Y H+ KRV+HRDIK N++L S ++ +FG + + +
Sbjct: 114 -----TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR 165
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
T + GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 166 T-----TLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 216
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 140/296 (47%), Gaps = 49/296 (16%)
Query: 327 LGKGGFGTVYK----GIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V GI ++K +AVK + + + + + ++E+ + + +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI---------FYDETNSGPGEVTLNWEKRLS 426
++ L+G C + ++ EY G+L +++ + + N P E + ++ +S
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-QMTFKDLVS 148
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+ ++ ++YL + ++ +HRD+ + N+++ ++ DFGLAR I N+ + T
Sbjct: 149 CTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDIN-NIDYYKKTT 204
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLW 545
+MAPE+ T ++D+++FGVL+ E+ G P Y V L+
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------YPGIPVEELF 256
Query: 546 ELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
+L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 257 KLLKEGHRMD------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 300
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 38/240 (15%)
Query: 312 KELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAE 364
K+ + A +F LGKG FG VY + R K+ +A+K + ++ + G + + E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLN 420
V LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------- 114
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 115 -----TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 166
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 167 X-----XLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 217
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 139/297 (46%), Gaps = 51/297 (17%)
Query: 327 LGKGGFGTVYK----GIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V GI ++K +AVK + + + + + ++E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI----------FYDETNSGPGEVTLNWEKRL 425
++ L+G C + ++ EY G+L +++ YD N P E + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD-INRVPEE-QMTFKDLV 160
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
S + ++ ++YL + ++ +HRD+ + N+++ ++ DFGLAR I N+ T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDXXKKT 216
Query: 486 KEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWL 544
+MAPE+ T ++D+++FGVL+ E+ G P Y V L
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------YPGIPVEEL 268
Query: 545 WELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
++L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 269 FKLLKEGHRMD------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 327 LGKGGFGTVYKGIWRNK-----EIAVKRVSE-TSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+GKG FG VY G + ++ + A+K +S T Q + F+ E + L H N++ LI
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 381 GWCYERHDF-LLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
G ++ YM +G L +FI + N ++ +S ++ ++YL
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-------ISFGLQVARGMEYL- 140
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPE 498
+E++ +HRD+ + N MLD F ++ DFGLAR I + A P + A E
Sbjct: 141 --AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 499 SFLVGRATIETDIYAFGVLILEV 521
S R T ++D+++FGVL+ E+
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWEL 221
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 38/240 (15%)
Query: 312 KELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAE 364
K+ + A +F LGKG FG VY + R K+ +A+K + ++ + G + + E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLN 420
V LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------- 114
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
+ I + AL Y H+ KRV+HRDIK N++L S ++ +FG + + +
Sbjct: 115 -----TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR 166
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
T + GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 167 T-----TLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 217
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 38/235 (16%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIG 369
A +F LGKG FG VY + R K+ +A+K + ++ + G + + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRL 425
LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------------ 111
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX---- 164
Query: 486 KEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 165 -XLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 214
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 140/296 (47%), Gaps = 49/296 (16%)
Query: 327 LGKGGFGTVYK----GIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V GI ++K +AVK + + + + + ++E+ + + +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI---------FYDETNSGPGEVTLNWEKRLS 426
++ L+G C + ++ EY G+L +++ + + N P E + ++ +S
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-QMTFKDLVS 207
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+ ++ ++YL + ++ +HRD+ + N+++ ++ DFGLAR I N+ + T
Sbjct: 208 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTT 263
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLW 545
+MAPE+ T ++D+++FGVL+ E+ G P Y V L+
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------YPGIPVEELF 315
Query: 546 ELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
+L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 316 KLLKEGHRMD------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 38/240 (15%)
Query: 312 KELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAE 364
K+ + A +F LGKG FG VY + R K+ +A+K + ++ + G + + E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLN 420
V LRH N+++L G+ ++ L+ EY P G+ L K +DE +
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------- 112
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
+ I + AL Y H+ KRV+HRDIK N++L S ++ DFG + + +
Sbjct: 113 -----TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNS 539
+ GT Y+ PE + GR E D+++ GVL E G+ P E N+Y +
Sbjct: 165 D-----TLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQET 215
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 27/230 (11%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQG-KQEFIAEVTTIGSLR 372
+F LGKG FG VY + R K+ +A+K + S+ ++G + + E+ L
Sbjct: 24 DFEIGRPLGKGKFGNVY--LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N+++L + Y+R L+ EY P G L Y E T + ++ +++ +
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGEL-----YKELQKS---CTFDEQRTATIMEELA 133
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
AL Y H K+V+HRDIK N++L + ++ DFG + +L+ K + GT
Sbjct: 134 DALMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLR----RKTMCGTL 185
Query: 493 GYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKPGNQSEQNSYNNSIV 541
Y+ PE + GR E D++ GVL E+ G P + N IV
Sbjct: 186 DYLPPE-MIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 234
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRN-------KEIAVKRVSETSRQGKQEFIAEVTTIGSL 371
GN+ LG+G FG V K I K ++++ QG+ E E++ + L
Sbjct: 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 70
Query: 372 RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGT 431
RH +++KL + + ++V EY N D + D+ + E +++ +S
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRFFQQIIS----- 123
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGT 491
A++Y H +++HRD+K N++LD N ++ DFGL+ + + + K G+
Sbjct: 124 --AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKTSCGS 174
Query: 492 PGYMAPESFLVGR--ATIETDIYAFGVLILEVACGRKP 527
P Y APE + G+ A E D+++ GV++ + C R P
Sbjct: 175 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 318 TGNFNPKNKLGKGGFGTVYKGIWRN-------KEIAVKRVSETSRQGKQEFIAEVTTIGS 370
GN+ LG+G FG V K I K ++++ QG+ E E++ +
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRL 64
Query: 371 LRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHG 430
LRH +++KL + + ++V EY N D + D+ + E +++ +S
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRFFQQIIS---- 118
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAG 490
A++Y H +++HRD+K N++LD N ++ DFGL+ + + + K G
Sbjct: 119 ---AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKTSCG 168
Query: 491 TPGYMAPESFLVGR--ATIETDIYAFGVLILEVACGRKP 527
+P Y APE + G+ A E D+++ GV++ + C R P
Sbjct: 169 SPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 7 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L F+ P + ++ +L Q
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLL------Q 117
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 118 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 171
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 32/220 (14%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRN-------KEIAVKRVSETSRQGKQEFIAEVTTIGSL 371
GN+ LG+G FG V K I K ++++ QG+ E E++ + L
Sbjct: 14 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 71
Query: 372 RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGT 431
RH +++KL + + ++V EY N D + D+ + E +++ +S
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRFFQQIIS----- 124
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN--LKTHHSTKEIA 489
A++Y H +++HRD+K N++LD N ++ DFGL+ + + LKT
Sbjct: 125 --AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS------C 173
Query: 490 GTPGYMAPESFLVGR--ATIETDIYAFGVLILEVACGRKP 527
G+P Y APE + G+ A E D+++ GV++ + C R P
Sbjct: 174 GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 24/219 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRH 373
NF K+G+G +G VYK RNK +A+K++ +T +G I E++ + L H
Sbjct: 4 NFQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
N+VKL+ + + LV+E++ + L F+ P + ++ +L Q
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLL------Q 114
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L + H+ RVLHRD+K N+++++E +L DFGLAR ++T+ E+ T
Sbjct: 115 GLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY--XHEVV-TLW 168
Query: 494 YMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGN 529
Y APE L + DI++ G + E+ R PG+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWRN-------KEIAVKRVSETSRQGKQEFIAEVTTIGSL 371
GN+ LG+G FG V K I K ++++ QG+ E E++ + L
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 61
Query: 372 RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGT 431
RH +++KL + + ++V EY N D + D+ + E +++ +S
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRFFQQIIS----- 114
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGT 491
A++Y H +++HRD+K N++LD N ++ DFGL+ + + + K G+
Sbjct: 115 --AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKTSCGS 165
Query: 492 PGYMAPESFLVGR--ATIETDIYAFGVLILEVACGRKP 527
P Y APE + G+ A E D+++ GV++ + C R P
Sbjct: 166 PNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 325 NKLGKGGFGTVYKGIWR--NKEIAVKRVSET-SRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
++G+G FG V+ G R N +AVK ET K +F+ E + H N+V+LIG
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
C ++ +V E + G F+ + L + L ++ + ++YL +
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGAR-------LRVKTLLQMVGDAAAGMEYLES- 231
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPESF 500
K +HRD+ + N ++ + ++ DFG++R +E ++ + P + APE+
Sbjct: 232 --KCCIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVXAASGGLRQVPVKWTAPEAL 287
Query: 501 LVGRATIETDIYAFGVLILE 520
GR + E+D+++FG+L+ E
Sbjct: 288 NYGRYSSESDVWSFGILLWE 307
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 327 LGKGGFGTVYKGI-WRNKEIAVKRVSETSR----QGKQEFIAEVTTIGSLRHRNLVKLIG 381
LGKGGF Y+ KE+ +V S K++ E+ SL + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 382 WCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ +E DF+ +V E SL + + + P E R + T Q + YLHN
Sbjct: 110 F-FEDDDFVYVVLEICRRRSLLELHKRRKAVTEP-------EARY-FMRQTIQGVQYLHN 160
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
RV+HRD+K N+ L+ + + ++GDFGLA I+ + K++ GTP Y+APE
Sbjct: 161 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD---GERKKDLCGTPNYIAPEVL 214
Query: 501 LVGRATIETDIYAFGVLILEVACGRKPGNQS 531
+ E DI++ G ++ + G+ P S
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 20/206 (9%)
Query: 325 NKLGKGGFGTV----YKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVK 378
++LGKG FG+V Y + N +AVK++ + +++F E+ + +L +VK
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 379 LIGWCYE--RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
G Y R + LV EY+P+G L F+ L+ + L + ++
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR-------LDASRLLLYSSQICKGME 125
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY-M 495
YL +R +HRD+ + NI+++SE + ++ DFGLA+ + + K +E +P +
Sbjct: 126 YL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-KDXXVVREPGQSPIFWY 181
Query: 496 APESFLVGRATIETDIYAFGVLILEV 521
APES + ++D+++FGV++ E+
Sbjct: 182 APESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 327 LGKGGFGTVYKGI-WRNKEIAVKRVSETSR----QGKQEFIAEVTTIGSLRHRNLVKLIG 381
LGKGGF Y+ KE+ +V S K++ E+ SL + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 382 WCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ +E DF+ +V E SL + + + P E R + T Q + YLHN
Sbjct: 94 F-FEDDDFVYVVLEICRRRSLLELHKRRKAVTEP-------EARY-FMRQTIQGVQYLHN 144
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
RV+HRD+K N+ L+ + + ++GDFGLA I+ + K++ GTP Y+APE
Sbjct: 145 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD---GERKKDLCGTPNYIAPEVL 198
Query: 501 LVGRATIETDIYAFGVLILEVACGRKPGNQS 531
+ E DI++ G ++ + G+ P S
Sbjct: 199 CKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 319 GNFNPKNKLGKGGFGTV--YKGIWRNKEIAVKRVSETSRQ--GKQEFIAEVTTIGSLRHR 374
GN+ +GKG F V + I +E+A+K + +T Q+ EV + L H
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
N+VKL L+ EY G + ++ + ++ S A
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLV--------AHGRMKEKEARSKFRQIVSA 123
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR--TIQENLKTHHSTKEIAGTP 492
+ Y H +KR++HRD+K+ N++LD++ N ++ DFG + T+ L T G+P
Sbjct: 124 VQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT------FCGSP 174
Query: 493 GYMAPESFLVGRAT-IETDIYAFGVLILEVACGRKP 527
Y APE F + E D+++ GV++ + G P
Sbjct: 175 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 31/218 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQG---KQEFIAEVTTIGSLRHR 374
+F+ LGKG FG VY R + +A+K + +T + + + EV LRH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGS----LDKFIFYDETNSGPGEVTLNWEKRLSVIHG 430
N+++L G+ ++ L+ EY P G+ L K +DE + + I
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA------------TYITE 120
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAG 490
+ AL Y H+ KRV+HRDIK N++L S ++ DFG + + + + G
Sbjct: 121 LANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR-----DTLCG 172
Query: 491 TPGYMAPESFLVGRATIE-TDIYAFGVLILEVACGRKP 527
T Y+ PE + GR E D+++ GVL E G P
Sbjct: 173 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 139/296 (46%), Gaps = 49/296 (16%)
Query: 327 LGKGGFGTVYK----GIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V GI ++K +AVK + + + + + ++E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI---------FYDETNSGPGEVTLNWEKRLS 426
++ L+G C + ++ Y G+L +++ + + N P E + ++ +S
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEE-QMTFKDLVS 161
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+ ++ ++YL + ++ +HRD+ + N+++ ++ DFGLAR I N+ + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTT 217
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLW 545
+MAPE+ T ++D+++FGVL+ E+ G P Y V L+
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------YPGIPVEELF 269
Query: 546 ELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
+L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 270 KLLKEGHRMD------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 325 NKLGKGGFG--TVYKGIWRNKEIAVKRV--SETSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
K+G+G FG + K ++ +K + S S + ++E EV + +++H N+V+
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
E +V +Y G L K I + + L+W ++ + AL ++H+
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL------ALKHVHD 143
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
+++LHRDIKS NI L + +LGDFG+AR + ++ + GTP Y++PE
Sbjct: 144 ---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL---ARACIGTPYYLSPEIC 197
Query: 501 LVGRATIETDIYAFGVLILEVA 522
++DI+A G ++ E+
Sbjct: 198 ENKPYNNKSDIWALGCVLYELC 219
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 113/230 (49%), Gaps = 20/230 (8%)
Query: 306 PKKFRLKELKKATGNFNPKNK-LGKGGFGTVYKGIWR------NKEIAVKRVSETSRQGK 358
P++ R KE+ ++K LG G FGTV KG ++ + + + K
Sbjct: 13 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 72
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT 418
E +AE + L + +V++IG C E ++LV E G L+K++ + N +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 128
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
+ + ++H S + YL E +HRD+ + N++L ++ A++ DFGL++ ++ +
Sbjct: 129 I-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 180
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ + + APE + + ++D+++FGVL+ E + G+KP
Sbjct: 181 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 113/230 (49%), Gaps = 20/230 (8%)
Query: 306 PKKFRLKELKKATGNFNPKNK-LGKGGFGTVYKGIWR------NKEIAVKRVSETSRQGK 358
P++ R KE+ ++K LG G FGTV KG ++ + + + K
Sbjct: 13 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 72
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT 418
E +AE + L + +V++IG C E ++LV E G L+K++ + N +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 128
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
+ + ++H S + YL E +HRD+ + N++L ++ A++ DFGL++ ++ +
Sbjct: 129 I-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 180
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ + + APE + + ++D+++FGVL+ E + G+KP
Sbjct: 181 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 33/214 (15%)
Query: 328 GKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQ-EFIAEVTTIGSLRHRNLVKLIGWCYER 386
+G FG V+K N+ +AVK +Q Q E+ EV ++ ++H N+++ IG E+
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIG--AEK 88
Query: 387 H------DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH- 439
D L+ + GSL F+ + ++W + + ++ L YLH
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLKAN---------VVSWNELCHIAETMARGLAYLHE 139
Query: 440 ------NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
+G + + HRDIKS N++L + A + DFGLA + K+ T GT
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG-KSAGDTHGQVGTRR 198
Query: 494 YMAPESF-----LVGRATIETDIYAFGVLILEVA 522
YMAPE A + D+YA G+++ E+A
Sbjct: 199 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELA 232
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 136/302 (45%), Gaps = 40/302 (13%)
Query: 310 RLKELKKATGNFNPKNKLGKGGFGTVYKGIW-------RNKEIAVKRVSETSRQG-KQEF 361
+LKE+ + F +LG+ FG VYKG + + +A+K + + + ++EF
Sbjct: 2 KLKEISLSAVRF--MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 59
Query: 362 IAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNW 421
E L+H N+V L+G + +++ Y +G L +F+ +S G +
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 422 EKRLSV-----IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQ 476
+ ++ +H +Q + S V+H+D+ + N+++ + N ++ D GL R +
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY 179
Query: 477 ENLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNS 535
++ + P +MAPE+ + G+ +I++DI+++GV++ EV G Q
Sbjct: 180 A--ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF---SYGLQPYCGY 234
Query: 536 YNNSIVHWLWELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMK 592
N +V E+ R ++L D +C V L + C + P RP K
Sbjct: 235 SNQDVV----EMIRNRQVLPCPD------------DCPAWVYALMIECWNEFPSRRPRFK 278
Query: 593 TV 594
+
Sbjct: 279 DI 280
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 122/244 (50%), Gaps = 37/244 (15%)
Query: 324 KNKLGKGGFGTVYKG-IWRNKEI-AVKRVSETSRQGK-------QEFIAEVTTIGSLRHR 374
+ ++GKGGFG V+KG + ++K + A+K + +G+ QEF EV + +L H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
N+VKL G + +V E++P G L + D+ + + W +L ++ +
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL-DKAHP------IKWSVKLRLMLDIALG 134
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDS-----EFNARLGDFGLARTIQENLKTHHSTKEIA 489
++Y+ N + ++HRD++S NI L S A++ DFGL++ ++ HS +
Sbjct: 135 IEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------QSVHSVSGLL 187
Query: 490 GTPGYMAPESFLVGRA--TIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWEL 547
G +MAPE+ T + D Y+F +++ + G P ++ Y+ + ++ +
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE-----YSYGKIKFINMI 242
Query: 548 RRKG 551
R +G
Sbjct: 243 REEG 246
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 113/230 (49%), Gaps = 20/230 (8%)
Query: 306 PKKFRLKELKKATGNFNPKNK-LGKGGFGTVYKGIWR------NKEIAVKRVSETSRQGK 358
P++ R KE+ ++K LG G FGTV KG ++ + + + K
Sbjct: 11 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 70
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT 418
E +AE + L + +V++IG C E ++LV E G L+K++ + N +
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 126
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
+ + ++H S + YL E +HRD+ + N++L ++ A++ DFGL++ ++ +
Sbjct: 127 I-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 178
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ + + APE + + ++D+++FGVL+ E + G+KP
Sbjct: 179 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 327 LGKGGFGTVYKGI-WRNKEIAVKRVSETSR----QGKQEFIAEVTTIGSLRHRNLVKLIG 381
LGKGGF Y+ KE+ +V S K++ E+ SL + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 382 WCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ +E DF+ +V E SL + + + P E R + T Q + YLHN
Sbjct: 110 F-FEDDDFVYVVLEICRRRSLLELHKRRKAVTEP-------EARY-FMRQTIQGVQYLHN 160
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
RV+HRD+K N+ L+ + + ++GDFGLA I+ + K + GTP Y+APE
Sbjct: 161 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD---GERKKTLCGTPNYIAPEVL 214
Query: 501 LVGRATIETDIYAFGVLILEVACGRKPGNQS 531
+ E DI++ G ++ + G+ P S
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 327 LGKGGFGTVYKGI-WRNKEIAVKRVSETSR----QGKQEFIAEVTTIGSLRHRNLVKLIG 381
LGKGGF Y+ KE+ +V S K++ E+ SL + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 382 WCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ +E DF+ +V E SL + + + P E R + T Q + YLHN
Sbjct: 110 F-FEDDDFVYVVLEICRRRSLLELHKRRKAVTEP-------EARY-FMRQTIQGVQYLHN 160
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
RV+HRD+K N+ L+ + + ++GDFGLA I+ + K + GTP Y+APE
Sbjct: 161 N---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD---GERKKXLCGTPNYIAPEVL 214
Query: 501 LVGRATIETDIYAFGVLILEVACGRKPGNQS 531
+ E DI++ G ++ + G+ P S
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 139/296 (46%), Gaps = 49/296 (16%)
Query: 327 LGKGGFGTVYK----GIWRNKE-----IAVKRVSE-TSRQGKQEFIAEVTTIGSL-RHRN 375
LG+G FG V GI ++K +AVK + + + + + ++E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI---------FYDETNSGPGEVTLNWEKRLS 426
++ L+G C + ++ Y G+L +++ + + N P E + ++ +S
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEE-QMTFKDLVS 161
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+ ++ ++YL + ++ +HRD+ + N+++ ++ DFGLAR I N+ + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN-NIDYYKKTT 217
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKPGNQSEQNSYNNSIVHWLW 545
+MAPE+ T ++D+++FGVL+ E+ G P Y V L+
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------YPGIPVEELF 269
Query: 546 ELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRPSMKTVLQVL 598
+L ++G +D K C + ++ C H P RP+ K +++ L
Sbjct: 270 KLLKEGHRMD------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 326 KLGKGGFGTVYKGIWRNK----EIAVKRVSE-TSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+LG G FG+V +G++R + ++A+K + + T + +E + E + L + +V+LI
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G C + +LV E G L KF+ V ++H S + YL
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA-------ELLHQVSMGMKYLE- 127
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPES 499
EK +HRD+ + N++L + A++ DFGL++ + + ++++ + P + APE
Sbjct: 128 --EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAGKWPLKWYAPEC 184
Query: 500 FLVGRATIETDIYAFGVLILE-VACGRKP 527
+ + +D++++GV + E ++ G+KP
Sbjct: 185 INFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 19/209 (9%)
Query: 326 KLGKGGFGTVYKGIWR------NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LG G FGTV KG ++ + + + K E +AE + L + +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
IG C E ++LV E G L+K++ + N + + + ++H S + YL
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNI-----IELVHQVSMGMKYL- 127
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
E +HRD+ + N++L ++ A++ DFGL++ ++ + + + + APE
Sbjct: 128 --EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPEC 185
Query: 500 FLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ + ++D+++FGVL+ E + G+KP
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 327 LGKGGFGTVYKG--IWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
LGKG +G VY G + IA+K + E + Q E+ L+H+N+V+ +G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGP---GEVTLNWEKRLSVIHGTSQALDYLHNG 441
E + E +P GSL + + GP E T+ + + ++ G L YLH+
Sbjct: 90 ENGFIKIFMEQVPGGSLSALL---RSKWGPLKDNEQTIGFYTK-QILEG----LKYLHD- 140
Query: 442 SEKRVLHRDIKSSNIMLDSEFNA-RLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
+++HRDIK N+++++ ++ DFG ++ + + T+ GT YMAPE
Sbjct: 141 --NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA---GINPCTETFTGTLQYMAPEII 195
Query: 501 LVGRATI--ETDIYAFGVLILEVACGRKP 527
G DI++ G I+E+A G+ P
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 319 GNFNPKNKLGKGGFGTV--YKGIWRNKEIAVKRVSETSRQGK--QEFIAEVTTIGSLRHR 374
GN+ +GKG F V + I KE+AV+ + +T Q+ EV + L H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
N+VKL LV EY G + ++ + ++ + A
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--------AHGRMKEKEARAKFRQIVSA 125
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+ Y H +K ++HRD+K+ N++LD++ N ++ DFG + + E G+P Y
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDEFCGSPPY 178
Query: 495 MAPESFLVGRAT-IETDIYAFGVLILEVACGRKP 527
APE F + E D+++ GV++ + G P
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 19/209 (9%)
Query: 326 KLGKGGFGTVYKGIWR------NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LG G FGTV KG ++ + + + K E +AE + L + +V++
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
IG C E ++LV E G L+K++ + N + + + ++H S + YL
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNI-----IELVHQVSMGMKYL- 123
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
E +HRD+ + N++L ++ A++ DFGL++ ++ + + + + APE
Sbjct: 124 --EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 500 FLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ + ++D+++FGVL+ E + G+KP
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 19/209 (9%)
Query: 326 KLGKGGFGTVYKGIWR------NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LG G FGTV KG ++ + + + K E +AE + L + +V++
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
IG C E ++LV E G L+K++ + N + + + ++H S + YL
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNI-----IELVHQVSMGMKYL- 121
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
E +HRD+ + N++L ++ A++ DFGL++ ++ + + + + APE
Sbjct: 122 --EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 500 FLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ + ++D+++FGVL+ E + G+KP
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 319 GNFNPKNKLGKGGFGTV--YKGIWRNKEIAVKRVSETSRQGK--QEFIAEVTTIGSLRHR 374
GN+ +GKG F V + I KE+AVK + +T Q+ EV + L H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
N+VKL LV EY G + ++ + ++ + A
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--------AHGRMKEKEARAKFRQIVSA 125
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR--TIQENLKTHHSTKEIAGTP 492
+ Y H +K ++HRD+K+ N++LD++ N ++ DFG + T L T G+P
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT------FCGSP 176
Query: 493 GYMAPESFLVGRAT-IETDIYAFGVLILEVACGRKP 527
Y APE F + E D+++ GV++ + G P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|B Chain B, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|C Chain C, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|D Chain D, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
Length = 233
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 20/235 (8%)
Query: 26 SLHFNFQSFTEQNRNELSFDNSTVAKSA--IQVTYDVRGAPITNQSGRAIYKDQFQLWRD 83
S F+F +F N+N L + SA +++T GAP+ + GRA+Y + D
Sbjct: 3 STSFSFTNF-NPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHI-HD 60
Query: 84 NKNVKATFSTTFVLNILNQTAQPG-EGLAFVIAGNKDLPENSEGQWLGIVNGITNGTNQS 142
N + A+F+T+F + A +GLAF +A P+ + G +LG+ + +
Sbjct: 61 NTTL-ASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQ-ARGGFLGLFADRAHDASY- 117
Query: 143 QIVAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQNIT 202
Q VA+EFDT S D N H+G+D N + S + P ++ G + + Y
Sbjct: 118 QTVAVEFDTY-SNAWDPNYTHIGIDTNGIESKKTTPF---DMVYGEKANIVITYQASTKA 173
Query: 203 -----VFVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDD---TQLNCVKSWAF 249
VF + + +S +DL + LPE V VGFSA+TG + + + + SW+F
Sbjct: 174 LAASLVFPVSQTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSF 228
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 319 GNFNPKNKLGKGGFGTV--YKGIWRNKEIAVKRVSETSRQGK--QEFIAEVTTIGSLRHR 374
GN+ +GKG F V + I KE+AVK + +T Q+ EV + L H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
N+VKL LV EY G + ++ + ++ + A
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--------AHGRMKEKEARAKFRQIVSA 125
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR--TIQENLKTHHSTKEIAGTP 492
+ Y H +K ++HRD+K+ N++LD++ N ++ DFG + T L T G+P
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT------FCGSP 176
Query: 493 GYMAPESFLVGRAT-IETDIYAFGVLILEVACGRKP 527
Y APE F + E D+++ GV++ + G P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 19/209 (9%)
Query: 326 KLGKGGFGTVYKGIWR------NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
+LG G FGTV KG ++ + + + K E +AE + L + +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
IG C E ++LV E G L+K++ + N + + + ++H S + YL
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNI-----IELVHQVSMGMKYL- 127
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
E +HRD+ + N++L ++ A++ DFGL++ ++ + + + + APE
Sbjct: 128 --EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 185
Query: 500 FLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ + ++D+++FGVL+ E + G+KP
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 319 GNFNPKNKLGKGGFGTV--YKGIWRNKEIAVKRVSETSRQ--GKQEFIAEVTTIGSLRHR 374
GN+ + +GKG F V + + +E+AVK + +T Q+ EV + L H
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
N+VKL LV EY G + ++ + ++ + A
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--------AHGRMKEKEARAKFRQIVSA 126
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR--TIQENLKTHHSTKEIAGTP 492
+ Y H +K ++HRD+K+ N++LD + N ++ DFG + T+ L T G+P
Sbjct: 127 VQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT------FCGSP 177
Query: 493 GYMAPESFLVGRAT-IETDIYAFGVLILEVACGRKP 527
Y APE F + E D+++ GV++ + G P
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 327 LGKGGFGTVYKG--IWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
LGKG +G VY G + IA+K + E + Q E+ L+H+N+V+ +G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGP---GEVTLNWEKRLSVIHGTSQALDYLHNG 441
E + E +P GSL + + GP E T+ + + ++ G L YLH+
Sbjct: 76 ENGFIKIFMEQVPGGSLSALL---RSKWGPLKDNEQTIGFYTK-QILEG----LKYLHD- 126
Query: 442 SEKRVLHRDIKSSNIMLDSEFNA-RLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
+++HRDIK N+++++ ++ DFG ++ + + T+ GT YMAPE
Sbjct: 127 --NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA---GINPCTETFTGTLQYMAPEII 181
Query: 501 LVGRATI--ETDIYAFGVLILEVACGRKP 527
G DI++ G I+E+A G+ P
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 29/243 (11%)
Query: 315 KKATGNFNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVT 366
+K ++ +LG G F V K G+ + KR S SR+G ++E EV+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 367 TIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
+ + H N++ L R D +L+ E + G L F+ E+ L+ E+ S
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--------LSEEEATS 119
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIML-DSEF---NARLGDFGLARTIQENLKTH 482
I ++YLH K++ H D+K NIML D + +L DFGLA I++ ++
Sbjct: 120 FIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF- 175
Query: 483 HSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSI 540
K I GTP ++APE +E D+++ GV+ + G P G+ ++ N +
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITA 232
Query: 541 VHW 543
V +
Sbjct: 233 VSY 235
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 19/209 (9%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVKRVSETSRQG------KQEFIAEVTTIGSLRHRNLVKL 379
+LG G FGTV KG ++ K++ + + K E +AE + L + +V++
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
IG C E ++LV E G L+K++ + N + + + ++H S + YL
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNI-----IELVHQVSMGMKYL- 133
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
E +HRD+ + N++L ++ A++ DFGL++ ++ + + + + APE
Sbjct: 134 --EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 500 FLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ + ++D+++FGVL+ E + G+KP
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex
pdb|2BQP|B Chain B, The Structure Of The Pea Lectin-D-Glucopyranose Complex
Length = 234
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 98/201 (48%), Gaps = 24/201 (11%)
Query: 65 ITNQSGRAIYKDQFQLW-RDNKNVKATFST--TFVLNILNQTAQPGEGLAFVIAGNKDLP 121
+ N GRA+Y +W R+ NV A F T TFV+N N + +G F IA P
Sbjct: 37 VKNTVGRALYSSPIHIWDRETGNV-ANFVTSFTFVINAPN-SYNVADGFTFFIAPVDTKP 94
Query: 122 ENSEGQWLGIVNGITNGTNQSQIVAIEFDT--KKSYEQDINDNHVGLDVNSVYSIRQVPL 179
+ + G +LG+ N +Q VA+EFDT +++ D H+G+DVNS I+ V
Sbjct: 95 Q-TGGGYLGVFNS-AEYDKTTQTVAVEFDTFYNAAWDPSNRDRHIGIDVNS---IKSVNT 149
Query: 180 TRVNLANGTDIKVQVRYDGQNITVFVANMETP-----------LLSEPIDLSEYLPEKVF 228
L NG + V + ++ V ++ P LS+ + L + +PE V
Sbjct: 150 KSWKLQNGEEANVVIAFNAAT-NVLTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVR 208
Query: 229 VGFSASTGDDTQLNCVKSWAF 249
+GFSA+TG + + V SW+F
Sbjct: 209 IGFSATTGAEYAAHEVLSWSF 229
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 319 GNFNPKNKLGKGGFGTV--YKGIWRNKEIAVKRVSETSRQ--GKQEFIAEVTTIGSLRHR 374
GN+ +GKG F V + I +E+A+K + +T Q+ EV + L H
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
N+VKL L+ EY G + ++ + ++ S A
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLV--------AHGRMKEKEARSKFRQIVSA 126
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+ Y H +KR++HRD+K+ N++LD++ N ++ DFG + K G P Y
Sbjct: 127 VQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD----AFCGAPPY 179
Query: 495 MAPESFLVGRAT-IETDIYAFGVLILEVACGRKP 527
APE F + E D+++ GV++ + G P
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 99/211 (46%), Gaps = 28/211 (13%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER 386
LGKG FG V KE A R K+ +A+ +L +++ R
Sbjct: 16 LGKGTFGKVI----LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ-----NSR 66
Query: 387 HDFLLVYEYMPNGSLDKFIFYDE-TNSGPGEVTLNWEKRLSV----IHGTS--QALDYLH 439
H FL +Y + D+ F E N G L+ E+ S +G ALDYLH
Sbjct: 67 HPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 125
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
SEK V++RD+K N+MLD + + ++ DFGL + E +K + K GTP Y+APE
Sbjct: 126 --SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEV 180
Query: 500 FL---VGRATIETDIYAFGVLILEVACGRKP 527
GRA D + GV++ E+ CGR P
Sbjct: 181 LEDNDYGRA---VDWWGLGVVMYEMMCGRLP 208
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 99/211 (46%), Gaps = 28/211 (13%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER 386
LGKG FG V KE A R K+ +A+ +L +++ R
Sbjct: 156 LGKGTFGKVI----LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ-----NSR 206
Query: 387 HDFLLVYEYMPNGSLDKFIFYDE-TNSGPGEVTLNWEKRLS----VIHGTS--QALDYLH 439
H FL +Y + D+ F E N G L+ E+ S +G ALDYLH
Sbjct: 207 HPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 265
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
SEK V++RD+K N+MLD + + ++ DFGL + E +K + K GTP Y+APE
Sbjct: 266 --SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYLAPEV 320
Query: 500 FL---VGRATIETDIYAFGVLILEVACGRKP 527
GRA D + GV++ E+ CGR P
Sbjct: 321 LEDNDYGRA---VDWWGLGVVMYEMMCGRLP 348
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 99/211 (46%), Gaps = 28/211 (13%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER 386
LGKG FG V KE A R K+ +A+ +L +++ R
Sbjct: 17 LGKGTFGKVI----LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ-----NSR 67
Query: 387 HDFLLVYEYMPNGSLDKFIFYDE-TNSGPGEVTLNWEKRLSV----IHGTS--QALDYLH 439
H FL +Y + D+ F E N G L+ E+ S +G ALDYLH
Sbjct: 68 HPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 126
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
SEK V++RD+K N+MLD + + ++ DFGL + E +K + K GTP Y+APE
Sbjct: 127 --SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEV 181
Query: 500 FL---VGRATIETDIYAFGVLILEVACGRKP 527
GRA D + GV++ E+ CGR P
Sbjct: 182 LEDNDYGRA---VDWWGLGVVMYEMMCGRLP 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 102/212 (48%), Gaps = 30/212 (14%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER 386
LGKG FG V KE A R K+ +A+ +L +++ R
Sbjct: 18 LGKGTFGKVI----LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ-----NSR 68
Query: 387 HDFLLVYEYMPNGSLDKFIFYDETNSGPGEV--TLNWEKRLSV----IHGTS--QALDYL 438
H FL +Y + D+ F E +G GE+ L+ E+ S +G ALDYL
Sbjct: 69 HPFLTALKYSFQ-THDRLCFVMEYANG-GELFFHLSRERVFSEDRARFYGAEIVSALDYL 126
Query: 439 HNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPE 498
H SEK V++RD+K N+MLD + + ++ DFGL + E +K + K GTP Y+APE
Sbjct: 127 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPE 181
Query: 499 SFL---VGRATIETDIYAFGVLILEVACGRKP 527
GRA D + GV++ E+ CGR P
Sbjct: 182 VLEDNDYGRA---VDWWGLGVVMYEMMCGRLP 210
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 29/243 (11%)
Query: 315 KKATGNFNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVT 366
+K ++ +LG G F V K G+ + KR S SR+G ++E EV+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 367 TIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
+ + H N++ L R D +L+ E + G L F+ E+ L+ E+ S
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--------LSEEEATS 119
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIML-DSEF---NARLGDFGLARTIQENLKTH 482
I ++YLH K++ H D+K NIML D + +L DFGLA I++ ++
Sbjct: 120 FIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF- 175
Query: 483 HSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSI 540
K I GTP ++APE +E D+++ GV+ + G P G+ ++ N +
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS 232
Query: 541 VHW 543
V +
Sbjct: 233 VSY 235
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 99/211 (46%), Gaps = 28/211 (13%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER 386
LGKG FG V KE A R K+ +A+ +L +++ R
Sbjct: 159 LGKGTFGKVI----LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ-----NSR 209
Query: 387 HDFLLVYEYMPNGSLDKFIFYDE-TNSGPGEVTLNWEKRLSV----IHGTS--QALDYLH 439
H FL +Y + D+ F E N G L+ E+ S +G ALDYLH
Sbjct: 210 HPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 268
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
SEK V++RD+K N+MLD + + ++ DFGL + E +K + K GTP Y+APE
Sbjct: 269 --SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYLAPEV 323
Query: 500 FL---VGRATIETDIYAFGVLILEVACGRKP 527
GRA D + GV++ E+ CGR P
Sbjct: 324 LEDNDYGRA---VDWWGLGVVMYEMMCGRLP 351
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 132/293 (45%), Gaps = 42/293 (14%)
Query: 327 LGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+G+G +G V K RNK+ +A+K+ S+ + K+ + E+ + LRH NLV L+
Sbjct: 33 VGEGSYGMVMK--CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
C ++ + LV+E++ + LD + N +V + +I+G + HN
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELF--PNGLDYQVVQKY--LFQIINGI--GFCHSHN 144
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
++HRDIK NI++ +L DFG ART+ + + E+A T Y APE
Sbjct: 145 -----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD--EVA-TRWYRAPE-L 195
Query: 501 LVGRATI--ETDIYAFGVLILEVACGRK--PGNQSEQNSYNNSIVHWLWELRRKGRILDA 556
LVG D++A G L+ E+ G PG+ Y+ I+ L L + + L
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYH--IMMCLGNLIPRHQELFN 253
Query: 557 ADSRLGG----EFSEKE---------MECVLILGLACCHPNPHLRPSMKTVLQ 596
+ G E E+E E V+ L C H +P RP +L
Sbjct: 254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 113/230 (49%), Gaps = 20/230 (8%)
Query: 306 PKKFRLKELKKATGNFNPKNK-LGKGGFGTVYKGIWR------NKEIAVKRVSETSRQGK 358
P++ R KE+ ++K LG G FGTV KG ++ + + + K
Sbjct: 355 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 414
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT 418
E +AE + L + +V++IG C E ++LV E G L+K++ + N +
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 470
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
+ + ++H S + YL E +HRD+ + N++L ++ A++ DFGL++ ++ +
Sbjct: 471 I-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 522
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ + + APE + + ++D+++FGVL+ E + G+KP
Sbjct: 523 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 29/243 (11%)
Query: 315 KKATGNFNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVT 366
+K ++ +LG G F V K G+ + KR S SR+G ++E EV+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 367 TIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
+ + H N++ L R D +L+ E + G L F+ E+ L+ E+ S
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--------LSEEEATS 119
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIML-DSEF---NARLGDFGLARTIQENLKTH 482
I ++YLH K++ H D+K NIML D + +L DFGLA I++ ++
Sbjct: 120 FIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF- 175
Query: 483 HSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSI 540
K I GTP ++APE +E D+++ GV+ + G P G+ ++ N +
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITA 232
Query: 541 VHW 543
V +
Sbjct: 233 VSY 235
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 113/230 (49%), Gaps = 20/230 (8%)
Query: 306 PKKFRLKELKKATGNFNPKNK-LGKGGFGTVYKGIWR------NKEIAVKRVSETSRQGK 358
P++ R KE+ ++K LG G FGTV KG ++ + + + K
Sbjct: 356 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 415
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT 418
E +AE + L + +V++IG C E ++LV E G L+K++ + N +
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 471
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
+ + ++H S + YL E +HRD+ + N++L ++ A++ DFGL++ ++ +
Sbjct: 472 I-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 523
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV-ACGRKP 527
+ + + APE + + ++D+++FGVL+ E + G+KP
Sbjct: 524 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 29/243 (11%)
Query: 315 KKATGNFNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVT 366
+K ++ +LG G F V K G+ + KR S SR+G ++E EV+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 367 TIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
+ + H N++ L R D +L+ E + G L F+ E+ L+ E+ S
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--------LSEEEATS 119
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIML-DSEF---NARLGDFGLARTIQENLKTH 482
I ++YLH K++ H D+K NIML D + +L DFGLA I++ ++
Sbjct: 120 FIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF- 175
Query: 483 HSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSI 540
K I GTP ++APE +E D+++ GV+ + G P G+ ++ N +
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS 232
Query: 541 VHW 543
V +
Sbjct: 233 VSY 235
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 319 GNFNPKNKLGKGGFGTV--YKGIWRNKEIAVKRVSETSRQGK--QEFIAEVTTIGSLRHR 374
GN+ +GKG F V + I KE+AV+ + +T Q+ EV + L H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
N+VKL LV EY G + ++ + ++ + A
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--------AHGRMKEKEARAKFRQIVSA 125
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR--TIQENLKTHHSTKEIAGTP 492
+ Y H +K ++HRD+K+ N++LD++ N ++ DFG + T L T G+P
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT------FCGSP 176
Query: 493 GYMAPESFLVGRAT-IETDIYAFGVLILEVACGRKP 527
Y APE F + E D+++ GV++ + G P
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 315 KKATGNFNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVT 366
+K ++ +LG G F V K G+ + KR S SR+G ++E EV+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 367 TIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
+ + H N++ L R D +L+ E + G L F+ E+ L+ E+ S
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--------LSEEEATS 119
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIML-DSEF---NARLGDFGLARTIQENLKTH 482
I ++YLH K++ H D+K NIML D + +L DFGLA I++ ++
Sbjct: 120 FIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF- 175
Query: 483 HSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
K I GTP ++APE +E D+++ GV+ + G P
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|C Chain C, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|D Chain D, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|E Chain E, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|F Chain F, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|G Chain G, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|H Chain H, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1F9K|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
pdb|1F9K|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
Length = 238
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 112/239 (46%), Gaps = 25/239 (10%)
Query: 29 FNFQSFTEQNRNELSFDNSTVAKS--AIQVTYDVR-GAPITNQSGRAIYKDQFQLWRDNK 85
FNF F E+N EL+ KS +++T + G P+ +GRA+Y + ++W
Sbjct: 5 FNFDHF-EENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTT 63
Query: 86 NVKATFSTTFVLNILNQTA--QPGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGTNQSQ 143
A+F T F NI A +P +GL F + + P+ +G LG+ G N
Sbjct: 64 GNVASFETRFSFNITQPYAYPEPADGLTFFMVP-PNSPQGEDGGNLGVFKP-PEGDNA-- 119
Query: 144 IVAIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQN--- 200
A+EFDT ++ D H+G+DVNS+ S + + L NG V ++YD
Sbjct: 120 -FAVEFDTFQN-TWDPQVPHIGIDVNSIVSSKTL---HFQLENGGVANVVIKYDSPTKIL 174
Query: 201 --ITVFVANMETPLLSEPIDLSEYLP--EKVFVGFSASTG---DDTQLNCVKSWAFDGS 252
+ F + LS +DL + P E V VG SA+TG + + + + SW+F S
Sbjct: 175 NVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSS 233
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 32/222 (14%)
Query: 327 LGKGGFGTV-------YKGIWRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVK 378
LG+G FG V KG +AVK + E + + ++ ++E + + H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 379 LIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPG-----------------EVTLNW 421
L G C + LL+ EY GSL F+ + GPG E L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI-QENLK 480
+S SQ + YL +E +++HRD+ + NI++ ++ DFGL+R + +E+
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
S I +MA ES T ++D+++FGVL+ E+
Sbjct: 207 VKRSQGRIPVK--WMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 121/244 (49%), Gaps = 37/244 (15%)
Query: 324 KNKLGKGGFGTVYKG-IWRNKEI-AVKRVSETSRQGK-------QEFIAEVTTIGSLRHR 374
+ ++GKGGFG V+KG + ++K + A+K + +G+ QEF EV + +L H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
N+VKL G + +V E++P G L + D+ + + W +L ++ +
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL-DKAHP------IKWSVKLRLMLDIALG 134
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDS-----EFNARLGDFGLARTIQENLKTHHSTKEIA 489
++Y+ N + ++HRD++S NI L S A++ DFG ++ ++ HS +
Sbjct: 135 IEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ------QSVHSVSGLL 187
Query: 490 GTPGYMAPESFLVGRA--TIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWEL 547
G +MAPE+ T + D Y+F +++ + G P ++ Y+ + ++ +
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE-----YSYGKIKFINMI 242
Query: 548 RRKG 551
R +G
Sbjct: 243 REEG 246
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 29/243 (11%)
Query: 315 KKATGNFNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVT 366
+K ++ +LG G F V K G+ + KR S SR+G ++E EV+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 367 TIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
+ + H N++ L R D +L+ E + G L F+ E+ L+ E+ S
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES--------LSEEEATS 119
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIML-DSEF---NARLGDFGLARTIQENLKTH 482
I ++YLH K++ H D+K NIML D + +L DFGLA I++ ++
Sbjct: 120 FIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF- 175
Query: 483 HSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSI 540
K I GTP ++APE +E D+++ GV+ + G P G+ ++ N +
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITA 232
Query: 541 VHW 543
V +
Sbjct: 233 VSY 235
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 20/214 (9%)
Query: 319 GNFNPKNKLGKGGFGTV--YKGIWRNKEIAVKRVSETSRQGK--QEFIAEVTTIGSLRHR 374
GN+ +GKG F V + I KE+AVK + +T Q+ EV + L H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
N+VKL LV EY G + ++ + ++ + A
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--------AHGRMKEKEARAKFRQIVSA 125
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+ Y H +K ++HRD+K+ N++LD++ N ++ DFG + + G P Y
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDAFCGAPPY 178
Query: 495 MAPESFLVGRAT-IETDIYAFGVLILEVACGRKP 527
APE F + E D+++ GV++ + G P
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 32/223 (14%)
Query: 324 KNKLGKGGFGTVYKG-IWRNKEI-AVKRVSETSRQGK-------QEFIAEVTTIGSLRHR 374
+ ++GKGGFG V+KG + ++K + A+K + +G+ QEF EV + +L H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
N+VKL G + +V E++P G L + D+ + + W +L ++ +
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL-DKAHP------IKWSVKLRLMLDIALG 134
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDS-----EFNARLGDFGLARTIQENLKTHHSTKEIA 489
++Y+ N + ++HRD++S NI L S A++ DF L++ ++ HS +
Sbjct: 135 IEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------QSVHSVSGLL 187
Query: 490 GTPGYMAPESFLVGRA--TIETDIYAFGVLILEVACGRKPGNQ 530
G +MAPE+ T + D Y+F +++ + G P ++
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 319 GNFNPKNKLGKGGFGTVYKGIWR--NKEIAVK-----RVSETSRQGKQEFIAEVTTIGSL 371
G++ + LG G FG V G ++AVK ++ GK E+ +
Sbjct: 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGK--IRREIQNLKLF 73
Query: 372 RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGT 431
RH +++KL D +V EY+ G L +I + G + +RL
Sbjct: 74 RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN------GRLDEKESRRL--FQQI 125
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGT 491
+DY H V+HRD+K N++LD+ NA++ DFGL+ + + + G+
Sbjct: 126 LSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG----EFLRXSCGS 178
Query: 492 PGYMAPESFLVGR--ATIETDIYAFGVLILEVACGRKP 527
P Y APE + GR A E DI++ GV++ + CG P
Sbjct: 179 PNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 326 KLGKGGFGTVYKGIWRNK----EIAVKRVSE-TSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+LG G FG+V +G++R + ++A+K + + T + +E + E + L + +V+LI
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
G C + +LV E G L KF+ V ++H S + YL
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA-------ELLHQVSMGMKYL-- 452
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP-GYMAPES 499
EK +HR++ + N++L + A++ DFGL++ + + ++++ + P + APE
Sbjct: 453 -EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAGKWPLKWYAPEC 510
Query: 500 FLVGRATIETDIYAFGVLILE-VACGRKP 527
+ + +D++++GV + E ++ G+KP
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 327 LGKGGFGTVYK----GIWRNK---EIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG G FG V GI + ++AVK + E + ++E ++E+ + L H N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 378 KLIGWCYERHDFLLVYEYMPNGSL--------DKF----IFYDETNSGPGEVTLN---WE 422
L+G C L++EY G L +KF I Y+ E LN +E
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 423 KRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTH 482
L + ++ +++L K +HRD+ + N+++ ++ DFGLAR I + ++
Sbjct: 173 DLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD--SN 227
Query: 483 HSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+ + A P +MAPES G TI++D++++G+L+ E+
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 32/222 (14%)
Query: 327 LGKGGFGTV-------YKGIWRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVK 378
LG+G FG V KG +AVK + E + + ++ ++E + + H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 379 LIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPG-----------------EVTLNW 421
L G C + LL+ EY GSL F+ + GPG E L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI-QENLK 480
+S SQ + YL +E +++HRD+ + NI++ ++ DFGL+R + +E+
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
S I +MA ES T ++D+++FGVL+ E+
Sbjct: 207 VKRSQGRIPVK--WMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 38/228 (16%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLV 377
+F +G GGFG V+K R K ++RV + + ++E V + L H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 378 KLIGWCYERHDF--------LLVYEYMPNGSLD------KFIFYDETNSGPGEVTLNWEK 423
G C++ D+ L +Y P S + K +F G + EK
Sbjct: 69 HYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 424 R----------LSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR 473
R L + ++ +DY+H+ K+++HRD+K SNI L ++GDFGL
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVT 184
Query: 474 TIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV 521
+++ + K S GT YM+PE E D+YA G+++ E+
Sbjct: 185 SLKNDGKRTRS----KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 37/221 (16%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLV 377
+F +G GGFG V+K R K +KRV + + ++E V + L H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIV 67
Query: 378 KLIGWCYERHDF-----------------LLVYEYMPNGSLDKFIFYDETNSGPGEVTLN 420
G C++ D+ + E+ G+L+++I E G L+
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI---EKRRGE---KLD 120
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
L + ++ +DY+H+ K++++RD+K SNI L ++GDFGL +++ + K
Sbjct: 121 KVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV 521
S GT YM+PE E D+YA G+++ E+
Sbjct: 178 RXRS----KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 29/231 (12%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR-NKEIAVKRV---SETSRQG-KQEFIAEVTTIGSLRHR 374
+F+ LGKG FG VY + NK I +V S+ ++G + + E+ LRH
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHG 430
N++++ + ++R L+ E+ P G L K + +DE S + +
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA------------TFMEE 122
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAG 490
+ AL Y H E++V+HRDIK N+++ + ++ DFG + +L+ + + G
Sbjct: 123 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLR----RRXMCG 174
Query: 491 TPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIV 541
T Y+ PE + D++ GVL E G P + + IV
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 29/231 (12%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR-NKEIAVKRV---SETSRQG-KQEFIAEVTTIGSLRHR 374
+F+ LGKG FG VY + NK I +V S+ ++G + + E+ LRH
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHG 430
N++++ + ++R L+ E+ P G L K + +DE S + +
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA------------TFMEE 123
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAG 490
+ AL Y H E++V+HRDIK N+++ + ++ DFG + +L+ + + G
Sbjct: 124 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLR----RRXMCG 175
Query: 491 TPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIV 541
T Y+ PE + D++ GVL E G P + + IV
Sbjct: 176 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 226
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 20/224 (8%)
Query: 307 KKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIA 363
+K ++ ELK +F ++LG G G V K R + + R E + + I
Sbjct: 6 QKAKVGELKD--DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIR 63
Query: 364 EVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEK 423
E+ + +V G Y + + E+M GSLD+ + E P E+ +
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KEAKRIPEEIL--GKV 119
Query: 424 RLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHH 483
++V+ G L YL + +++HRD+K SNI+++S +L DFG++ + +++
Sbjct: 120 SIAVLRG----LAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---- 169
Query: 484 STKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
GT YMAPE ++++DI++ G+ ++E+A GR P
Sbjct: 170 -ANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 29/231 (12%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR-NKEIAVKRV---SETSRQG-KQEFIAEVTTIGSLRHR 374
+F+ LGKG FG VY + NK I +V S+ ++G + + E+ LRH
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHG 430
N++++ + ++R L+ E+ P G L K + +DE S + +
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA------------TFMEE 122
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAG 490
+ AL Y H E++V+HRDIK N+++ + ++ DFG + +L+ + + G
Sbjct: 123 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLR----RRXMCG 174
Query: 491 TPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIV 541
T Y+ PE + D++ GVL E G P + + IV
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 20/220 (9%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTT 367
L ELK +F ++LG G G V+K + + + R E + + I E+
Sbjct: 3 LGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 60
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSV 427
+ +V G Y + + E+M GSLD+ + +G + + ++V
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAV 116
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
I G L YL + +++HRD+K SNI+++S +L DFG++ + + + E
Sbjct: 117 IKG----LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEM-----ANE 165
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
GT YM+PE ++++DI++ G+ ++E+A GR P
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 32/222 (14%)
Query: 327 LGKGGFGTV-------YKGIWRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVK 378
LG+G FG V KG +AVK + E + + ++ ++E + + H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 379 LIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPG-----------------EVTLNW 421
L G C + LL+ EY GSL F+ + GPG E L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI-QENLK 480
+S SQ + YL +E ++HRD+ + NI++ ++ DFGL+R + +E+
Sbjct: 150 GDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
S I +MA ES T ++D+++FGVL+ E+
Sbjct: 207 VKRSQGRIPVK--WMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 20/224 (8%)
Query: 307 KKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIA 363
+K ++ ELK +F ++LG G G V+K + + + R E + + I
Sbjct: 58 QKQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 115
Query: 364 EVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEK 423
E+ + +V G Y + + E+M GSLD+ + +G + +
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKV 171
Query: 424 RLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHH 483
++VI G L YL + +++HRD+K SNI+++S +L DFG++ + +++
Sbjct: 172 SIAVIKG----LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---- 221
Query: 484 STKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
GT YM+PE ++++DI++ G+ ++E+A GR P
Sbjct: 222 -ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 30/230 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS--ETSRQGKQEFIAEVTTIGSL 371
K + N++ K +LGKG F V + + + E A K ++ + S + Q+ E L
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 372 RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSV 427
+H N+V+L E LV++ + G L + I FY E ++
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------------- 108
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHS 484
H Q L+ + ++HR++K N++L S+ +L DFGLA + ++ H
Sbjct: 109 -HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH-- 165
Query: 485 TKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQN 534
AGTPGY++PE + DI+A GV++ + G P +Q+
Sbjct: 166 --GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 92/191 (48%), Gaps = 7/191 (3%)
Query: 341 RNKEIAVKRVS-ETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNG 399
+ +++A+KR++ E + E + E+ + H N+V + + LV + + G
Sbjct: 34 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 93
Query: 400 SLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD 459
S+ I + L+ +++ + L+YLH + +HRD+K+ NI+L
Sbjct: 94 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLG 150
Query: 460 SEFNARLGDFGLARTIQE--NLKTHHSTKEIAGTPGYMAPESFLVGRA-TIETDIYAFGV 516
+ + ++ DFG++ + ++ + K GTP +MAPE R + DI++FG+
Sbjct: 151 EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGI 210
Query: 517 LILEVACGRKP 527
+E+A G P
Sbjct: 211 TAIELATGAAP 221
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 92/191 (48%), Gaps = 7/191 (3%)
Query: 341 RNKEIAVKRVS-ETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNG 399
+ +++A+KR++ E + E + E+ + H N+V + + LV + + G
Sbjct: 39 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98
Query: 400 SLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD 459
S+ I + L+ +++ + L+YLH + +HRD+K+ NI+L
Sbjct: 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLG 155
Query: 460 SEFNARLGDFGLARTIQE--NLKTHHSTKEIAGTPGYMAPESFLVGRA-TIETDIYAFGV 516
+ + ++ DFG++ + ++ + K GTP +MAPE R + DI++FG+
Sbjct: 156 EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGI 215
Query: 517 LILEVACGRKP 527
+E+A G P
Sbjct: 216 TAIELATGAAP 226
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGKQEFIAEVTTIG- 369
++K +F LGKG FG V+ ++ N+ A+K + + + E T +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD--VECTMVEK 69
Query: 370 -----SLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKR 424
+ H L + + + V EY+ G L Y + +++
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL----MYHIQSCHKFDLSRATFYA 125
Query: 425 LSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHS 484
+I G L +LH+ K +++RD+K NI+LD + + ++ DFG+ + EN+
Sbjct: 126 AEIILG----LQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAK 175
Query: 485 TKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSI 540
T E GTP Y+APE L + D ++FGVL+ E+ G+ P + ++ +SI
Sbjct: 176 TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 30/230 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS--ETSRQGKQEFIAEVTTIGSL 371
K + N++ K +LGKG F V + + + E A K ++ + S + Q+ E L
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 372 RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSV 427
+H N+V+L E LV++ + G L + I FY E ++
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------------- 107
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHS 484
H Q L+ + ++HR++K N++L S+ +L DFGLA + ++ H
Sbjct: 108 -HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH-- 164
Query: 485 TKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQN 534
AGTPGY++PE + DI+A GV++ + G P +Q+
Sbjct: 165 --GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 212
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 30/230 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS--ETSRQGKQEFIAEVTTIGSL 371
K + N++ K +LGKG F V + + + E A K ++ + S + Q+ E L
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 372 RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSV 427
+H N+V+L E LV++ + G L + I FY E ++
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-------------- 108
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHS 484
H Q L+ + ++HR++K N++L S+ +L DFGLA + ++ H
Sbjct: 109 -HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG- 166
Query: 485 TKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQN 534
AGTPGY++PE + DI+A GV++ + G P +Q+
Sbjct: 167 ---FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 308 KFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS--ETSRQGKQEFIA 363
+F + K + N++ K +LGKG F V + + + E A K ++ + S + Q+
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER 77
Query: 364 EVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTL 419
E L+H N+V+L E LV++ + G L + I FY E ++
Sbjct: 78 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS------ 131
Query: 420 NWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNA---RLGDFGLARTIQ 476
I +++ Y H+ ++HR++K N++L S+ +L DFGLA +
Sbjct: 132 ------HCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182
Query: 477 ENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
++ H AGTPGY++PE + DI+A GV++ + G P
Sbjct: 183 DSEAWHG----FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 20/224 (8%)
Query: 307 KKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIA 363
+K ++ ELK +F ++LG G G V+K + + + R E + + I
Sbjct: 23 QKQKVGELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 80
Query: 364 EVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEK 423
E+ + +V G Y + + E+M GSLD+ + +G + +
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKV 136
Query: 424 RLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHH 483
++VI G L YL + +++HRD+K SNI+++S +L DFG++ + +++
Sbjct: 137 SIAVIKG----LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---- 186
Query: 484 STKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
GT YM+PE ++++DI++ G+ ++E+A GR P
Sbjct: 187 -ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 41/234 (17%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRVSETSRQG--KQEFIAEVTTIGSLR-HRNLVKLI 380
KLGKG +G V+K I R + +AVK++ + + Q E+ + L H N+V L+
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 381 GWCYERHD--FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYL 438
+D LV++YM + ++ L + V++ + + YL
Sbjct: 76 NVLRADNDRDVYLVFDYMET----------DLHAVIRANILEPVHKQYVVYQLIKVIKYL 125
Query: 439 HNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR--------------TIQENLKTHHS 484
H+G +LHRD+K SNI+L++E + ++ DFGL+R +I EN +
Sbjct: 126 HSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182
Query: 485 TKEI----AGTPGYMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PGNQS 531
+ I T Y APE L + T D+++ G ++ E+ CG+ PG+ +
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 20/214 (9%)
Query: 319 GNFNPKNKLGKGGFGTV--YKGIWRNKEIAVKRVSETSRQGK--QEFIAEVTTIGSLRHR 374
GN+ +GKG F V + I KE+AVK + +T Q+ EV L H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
N+VKL LV EY G + ++ E + + +S A
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLV-AHGRXKEKEARAKFRQIVS-------A 125
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+ Y H +K ++HRD+K+ N++LD++ N ++ DFG + + G P Y
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFS----NEFTFGNKLDAFCGAPPY 178
Query: 495 MAPESFLVGRAT-IETDIYAFGVLILEVACGRKP 527
APE F + E D+++ GV++ + G P
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLRHRNL 376
+F ++LG G G V+K + + + R E + + I E+ + +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
V G Y + + E+M GSLD+ + +G + + ++VI G L
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKG----LT 118
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YL + +++HRD+K SNI+++S +L DFG++ + +++ GT YM+
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMS 171
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKP 527
PE ++++DI++ G+ ++E+A GR P
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLRHRNL 376
+F ++LG G G V+K + + + R E + + I E+ + +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
V G Y + + E+M GSLD+ + +G + + ++VI G L
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKG----LT 118
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YL + +++HRD+K SNI+++S +L DFG++ + +++ GT YM+
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMS 171
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKP 527
PE ++++DI++ G+ ++E+A GR P
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 20/224 (8%)
Query: 307 KKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIA 363
+K ++ ELK +F ++LG G G V+K + + + R E + + I
Sbjct: 15 QKQKVGELK--DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 72
Query: 364 EVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEK 423
E+ + +V G Y + + E+M GSLD+ + +G + +
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKV 128
Query: 424 RLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHH 483
++VI G L YL + +++HRD+K SNI+++S +L DFG++ + +++
Sbjct: 129 SIAVIKG----LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---- 178
Query: 484 STKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
GT YM+PE ++++DI++ G+ ++E+A GR P
Sbjct: 179 -ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLRHRNL 376
+F ++LG G G V+K + + + R E + + I E+ + +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
V G Y + + E+M GSLD+ + +G + + ++VI G L
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKG----LT 118
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YL + +++HRD+K SNI+++S +L DFG++ + +++ GT YM+
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMS 171
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKP 527
PE ++++DI++ G+ ++E+A GR P
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLRHRNL 376
+F ++LG G G V+K + + + R E + + I E+ + +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
V G Y + + E+M GSLD+ + +G + + ++VI G L
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKG----LT 118
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YL + +++HRD+K SNI+++S +L DFG++ + +++ GT YM+
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMS 171
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKP 527
PE ++++DI++ G+ ++E+A GR P
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLRHRNL 376
+F ++LG G G V+K + + + R E + + I E+ + +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
V G Y + + E+M GSLD+ + +G + + ++VI G L
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKG----LT 118
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YL + +++HRD+K SNI+++S +L DFG++ + +++ GT YM+
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMS 171
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKP 527
PE ++++DI++ G+ ++E+A GR P
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 36/220 (16%)
Query: 324 KNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFI-AEVTTIGSLRHRNLVKLIG- 381
+ +GKG FG V++G WR +E+AVK S SR+ + F AE+ LRH N++ I
Sbjct: 9 QESIGKGRFGEVWRGKWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAA 66
Query: 382 -------WCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
W LV +Y +GSL D Y T G ++ L+ L+ +H
Sbjct: 67 DNKDNGTWT----QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH---- 118
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA---- 489
++ + + + HRD+KS NI++ + D GLA ++ + T T +IA
Sbjct: 119 -MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSAT--DTIDIAPNHR 173
Query: 490 -GTPGYMAPESF--LVGRATIET----DIYAFGVLILEVA 522
GT YMAPE + E+ DIYA G++ E+A
Sbjct: 174 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 36/220 (16%)
Query: 324 KNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFI-AEVTTIGSLRHRNLVKLIG- 381
+ +GKG FG V++G WR +E+AVK S SR+ + F AE+ LRH N++ I
Sbjct: 47 QESIGKGRFGEVWRGKWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 382 -------WCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
W LV +Y +GSL D Y T G ++ L+ L+ +H
Sbjct: 105 DNKDNGTWT----QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH---- 156
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA---- 489
++ + + + HRD+KS NI++ + D GLA ++ + T T +IA
Sbjct: 157 -MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSAT--DTIDIAPNHR 211
Query: 490 -GTPGYMAPESF--LVGRATIET----DIYAFGVLILEVA 522
GT YMAPE + E+ DIYA G++ E+A
Sbjct: 212 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 36/220 (16%)
Query: 324 KNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFI-AEVTTIGSLRHRNLVKLIG- 381
+ +GKG FG V++G WR +E+AVK S SR+ + F AE+ LRH N++ I
Sbjct: 14 QESIGKGRFGEVWRGKWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAA 71
Query: 382 -------WCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
W LV +Y +GSL D Y T G ++ L+ L+ +H
Sbjct: 72 DNKDNGTWT----QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH---- 123
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA---- 489
++ + + + HRD+KS NI++ + D GLA ++ + T T +IA
Sbjct: 124 -MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSAT--DTIDIAPNHR 178
Query: 490 -GTPGYMAPESF--LVGRATIET----DIYAFGVLILEVA 522
GT YMAPE + E+ DIYA G++ E+A
Sbjct: 179 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 36/220 (16%)
Query: 324 KNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFI-AEVTTIGSLRHRNLVKLIG- 381
+ +GKG FG V++G WR +E+AVK S SR+ + F AE+ LRH N++ I
Sbjct: 34 QESIGKGRFGEVWRGKWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAA 91
Query: 382 -------WCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
W LV +Y +GSL D Y T G ++ L+ L+ +H
Sbjct: 92 DNKDNGTWT----QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH---- 143
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA---- 489
++ + + + HRD+KS NI++ + D GLA ++ + T T +IA
Sbjct: 144 -MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSAT--DTIDIAPNHR 198
Query: 490 -GTPGYMAPESF--LVGRATIET----DIYAFGVLILEVA 522
GT YMAPE + E+ DIYA G++ E+A
Sbjct: 199 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 36/220 (16%)
Query: 324 KNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFI-AEVTTIGSLRHRNLVKLIG- 381
+ +GKG FG V++G WR +E+AVK S SR+ + F AE+ LRH N++ I
Sbjct: 8 QESIGKGRFGEVWRGKWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAA 65
Query: 382 -------WCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
W LV +Y +GSL D Y T G ++ L+ L+ +H
Sbjct: 66 DNKDNGTWT----QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH---- 117
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA---- 489
++ + + + HRD+KS NI++ + D GLA ++ + T T +IA
Sbjct: 118 -MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSAT--DTIDIAPNHR 172
Query: 490 -GTPGYMAPESF--LVGRATIET----DIYAFGVLILEVA 522
GT YMAPE + E+ DIYA G++ E+A
Sbjct: 173 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 36/220 (16%)
Query: 324 KNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFI-AEVTTIGSLRHRNLVKLIG- 381
+ +GKG FG V++G WR +E+AVK S SR+ + F AE+ LRH N++ I
Sbjct: 11 QESIGKGRFGEVWRGKWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAA 68
Query: 382 -------WCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
W LV +Y +GSL D Y T G ++ L+ L+ +H
Sbjct: 69 DNKDNGTWT----QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH---- 120
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA---- 489
++ + + + HRD+KS NI++ + D GLA ++ + T T +IA
Sbjct: 121 -MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSAT--DTIDIAPNHR 175
Query: 490 -GTPGYMAPESF--LVGRATIET----DIYAFGVLILEVA 522
GT YMAPE + E+ DIYA G++ E+A
Sbjct: 176 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 42/235 (17%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRN----KEIAVKRVSETSRQGKQEFIAEVTTIGSL 371
+ +F LG+G FG V K RN + A+K++ T + ++EV + SL
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKA--RNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASL 59
Query: 372 RHRNLVKLIGWCYERHDFL-------------LVYEYMPNGSLDKFIFYDETNSGPGEVT 418
H+ +V+ ER +F+ + EY NG+L I + N E
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY- 118
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
W + +AL Y+H+ ++HRD+K NI +D N ++GDFGLA+ + +
Sbjct: 119 --WR----LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 479 LK-----------THHSTKEIAGTPGYMAPESFL-VGRATIETDIYAFGVLILEV 521
L + + GT Y+A E G + D+Y+ G++ E+
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 116/261 (44%), Gaps = 35/261 (13%)
Query: 315 KKATGNFNPKNKLGKGGFGTVYKGIWRNKEI----AVKRVSETSRQGKQEFIAEVT---T 367
K +F+ LGKG FG V + R K A+K + + K E VT
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 63
Query: 368 IGSLRHRNLVKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
+ + RH L L + ++ HD L V EY G L F+ + E E+
Sbjct: 64 LQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL----FFHLSR----ERVFTEERARF 114
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
AL+YLH+ + V++RDIK N+MLD + + ++ DFGL + E + + K
Sbjct: 115 YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMK 168
Query: 487 EIAGTPGYMAPESFL---VGRATIETDIYAFGVLILEVACGRKP-GNQSEQNSYNNSIVH 542
GTP Y+APE GRA D + GV++ E+ CGR P NQ + + ++
Sbjct: 169 XFCGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 225
Query: 543 WLWELRRKGRILDAADSRLGG 563
E+R + A S L G
Sbjct: 226 ---EIRFPRTLSPEAKSLLAG 243
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 33/260 (12%)
Query: 315 KKATGNFNPKNKLGKGGFGTVYKGIWRNKEI----AVKRVSETSRQGKQEFIAEVT---T 367
K +F+ LGKG FG V + R K A+K + + K E VT
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 368 IGSLRHRNLVKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
+ + RH L L + ++ HD L V EY G L F+ + E E+
Sbjct: 59 LQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL----FFHLSR----ERVFTEERARF 109
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
AL+YLH+ + V++RDIK N+MLD + + ++ DFGL + E + + K
Sbjct: 110 YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMK 163
Query: 487 EIAGTPGYMAPESFL---VGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHW 543
GTP Y+APE GRA D + GV++ E+ CGR P + I+
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL-- 218
Query: 544 LWELRRKGRILDAADSRLGG 563
+ E+R + A S L G
Sbjct: 219 MEEIRFPRTLSPEAKSLLAG 238
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 29/253 (11%)
Query: 404 FIFYDETNSGPGEVTLNWEKRLSVIHG------TSQALDYLHNGSEKRVLHRDIKSSNIM 457
F + N G + +++L H S AL+YLH E+ +++RD+K N++
Sbjct: 97 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVL 153
Query: 458 LDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVL 517
LDSE + +L D+G+ + E L+ +T GTP Y+APE D +A GVL
Sbjct: 154 LDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVL 210
Query: 518 ILEVACGRKP------GNQSEQNSYNNSIVHWLWELRRKGRILDAADSRLGGEFSEKE-- 569
+ E+ GR P + +QN+ + L + R R + + + F K+
Sbjct: 211 MFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKAASVLKSFLNKDPK 270
Query: 570 --MECVLILGLACCHPNPHLRPSMKTVLQVLSGEADPPVLPPERPSFVWPAMPPSFVESD 627
+ C+ G A +P R +++ V+PP +P+ +F +S
Sbjct: 271 ERLGCLPQTGFADIQGHPFFRNVDWDMME------QKQVVPPFKPNISGEFGLDNF-DSQ 323
Query: 628 YTHTGSQLDPFSD 640
+T+ QL P D
Sbjct: 324 FTNERVQLXPDDD 336
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 33/260 (12%)
Query: 315 KKATGNFNPKNKLGKGGFGTVYKGIWRNKEI----AVKRVSETSRQGKQEFIAEVT---T 367
K +F+ LGKG FG V + R K A+K + + K E VT
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 368 IGSLRHRNLVKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
+ + RH L L + ++ HD L V EY G L F+ + E E+
Sbjct: 59 LQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL----FFHLSR----ERVFTEERARF 109
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
AL+YLH+ + V++RDIK N+MLD + + ++ DFGL + E + + K
Sbjct: 110 YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMK 163
Query: 487 EIAGTPGYMAPESFL---VGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHW 543
GTP Y+APE GRA D + GV++ E+ CGR P + I+
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL-- 218
Query: 544 LWELRRKGRILDAADSRLGG 563
+ E+R + A S L G
Sbjct: 219 MEEIRFPRTLSPEAKSLLAG 238
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 116/261 (44%), Gaps = 35/261 (13%)
Query: 315 KKATGNFNPKNKLGKGGFGTVYKGIWRNKEI----AVKRVSETSRQGKQEFIAEVT---T 367
K +F+ LGKG FG V + R K A+K + + K E VT
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 368 IGSLRHRNLVKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
+ + RH L L + ++ HD L V EY G L F+ + E E+
Sbjct: 59 LQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL----FFHLSR----ERVFTEERARF 109
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
AL+YLH+ + V++RDIK N+MLD + + ++ DFGL + E + + K
Sbjct: 110 YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMK 163
Query: 487 EIAGTPGYMAPESFL---VGRATIETDIYAFGVLILEVACGRKP-GNQSEQNSYNNSIVH 542
GTP Y+APE GRA D + GV++ E+ CGR P NQ + + ++
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 220
Query: 543 WLWELRRKGRILDAADSRLGG 563
E+R + A S L G
Sbjct: 221 ---EIRFPRTLSPEAKSLLAG 238
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 320 NFNPKNKLGKGGFGTVY----KGIWRNKEIAVKRVSETSRQGKQEF-IAEVTTIGSLRHR 374
+FN LGKG FG V KG I + + + E + E + L
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 375 NLVKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
+ + C++ D L V EY+ G L I P V E S
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAE--------ISI 131
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L +LH ++ +++RD+K N+MLDSE + ++ DFG+ + E++ +T+E GTP
Sbjct: 132 GLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFCGTPD 185
Query: 494 YMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIV 541
Y+APE D +A+GVL+ E+ G+ P + +++ SI+
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM 233
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 33/260 (12%)
Query: 315 KKATGNFNPKNKLGKGGFGTVYKGIWRNKEI----AVKRVSETSRQGKQEFIAEVT---T 367
K +F+ LGKG FG V + R K A+K + + K E VT
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 368 IGSLRHRNLVKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
+ + RH L L + ++ HD L V EY G L F+ + E E+
Sbjct: 59 LQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL----FFHLSR----ERVFTEERARF 109
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
AL+YLH+ + V++RDIK N+MLD + + ++ DFGL + E + + K
Sbjct: 110 YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMK 163
Query: 487 EIAGTPGYMAPESFL---VGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHW 543
GTP Y+APE GRA D + GV++ E+ CGR P + I+
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL-- 218
Query: 544 LWELRRKGRILDAADSRLGG 563
+ E+R + A S L G
Sbjct: 219 MEEIRFPRTLSPEAKSLLAG 238
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 33/260 (12%)
Query: 315 KKATGNFNPKNKLGKGGFGTVYKGIWRNKEI----AVKRVSETSRQGKQEFIAEVT---T 367
K +F+ LGKG FG V + R K A+K + + K E VT
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 368 IGSLRHRNLVKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
+ + RH L L + ++ HD L V EY G L F+ + E E+
Sbjct: 59 LQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL----FFHLSR----ERVFTEERARF 109
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
AL+YLH+ + V++RDIK N+MLD + + ++ DFGL + E + + K
Sbjct: 110 YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMK 163
Query: 487 EIAGTPGYMAPESFL---VGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHW 543
GTP Y+APE GRA D + GV++ E+ CGR P + I+
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL-- 218
Query: 544 LWELRRKGRILDAADSRLGG 563
+ E+R + A S L G
Sbjct: 219 MEEIRFPRTLSPEAKSLLAG 238
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 34/224 (15%)
Query: 315 KKATGNFNPKNKLGKGGFGTV-----------YKGIWRNKEIAVKRVSETSRQGKQEFIA 363
K + +F LG G FG V Y KEI V R+ + + +
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLML 60
Query: 364 EVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEK 423
+ T H ++++ G + ++ +Y+ G L F ++ P V +
Sbjct: 61 SIVT-----HPFIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAA 113
Query: 424 RLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHH 483
+ + AL+YLH+ K +++RD+K NI+LD + ++ DFG A+ + +
Sbjct: 114 EVCL------ALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD------ 158
Query: 484 STKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
T + GTP Y+APE D ++FG+LI E+ G P
Sbjct: 159 VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 33/260 (12%)
Query: 315 KKATGNFNPKNKLGKGGFGTVYKGIWRNKEI----AVKRVSETSRQGKQEFIAEVT---T 367
K +F+ LGKG FG V + R K A+K + + K E VT
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 368 IGSLRHRNLVKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
+ + RH L L + ++ HD L V EY G L F+ + E E+
Sbjct: 62 LQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL----FFHLSR----ERVFTEERARF 112
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
AL+YLH+ + V++RDIK N+MLD + + ++ DFGL + E + + K
Sbjct: 113 YGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMK 166
Query: 487 EIAGTPGYMAPESFL---VGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHW 543
GTP Y+APE GRA D + GV++ E+ CGR P + I+
Sbjct: 167 TFCGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL-- 221
Query: 544 LWELRRKGRILDAADSRLGG 563
+ E+R + A S L G
Sbjct: 222 MEEIRFPRTLSPEAKSLLAG 241
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 321 FNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGKQE--FIAEVTTIGSLRHRNL 376
+N LGKG FG V K R +E AVK +++ S + K + EV + L H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS------VIHG 430
+KL + F +V E G L +DE + KR S +I
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGEL-----FDE---------IIKRKRFSEHDAARIIKQ 129
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDS---EFNARLGDFGLARTIQENLKTHHSTKE 487
+ Y+H + ++HRD+K NI+L+S + + ++ DFGL+ Q+N K K+
Sbjct: 130 VFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK----MKD 182
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
GT Y+APE L G + D+++ GV++ + G P
Sbjct: 183 RIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRV---------SETSRQGKQEFIAEVTTI 368
N+ PK LG+G V + I + KE AVK + +E ++ ++ + EV +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 369 GSLR-HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSV 427
+ H N+++L F LV++ M G L F + E +VTL+ ++ +
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL--FDYLTE------KVTLSEKETRKI 129
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
+ + + LH + ++HRD+K NI+LD + N +L DFG + + K +E
Sbjct: 130 MRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK----LRE 182
Query: 488 IAGTPGYMAPESFLVGRAT------IETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE E D+++ GV++ + G P
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 18/210 (8%)
Query: 326 KLGKGGFGTVYKGIWR--NKEIAVKRVSET--SRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
++G+G +G+V K + + + +AVKR+ T ++ KQ + + S +V+ G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+ D + E M + S DKF Y S +V + E + T +AL++L
Sbjct: 89 ALFREGDCWICMELM-STSFDKF--YKYVYSVLDDV-IPEEILGKITLATVKALNHLKEN 144
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+++HRDIK SNI+LD N +L DFG++ + +++ AG YMAPE
Sbjct: 145 L--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD----AGCRPYMAPERID 198
Query: 502 VGRA----TIETDIYAFGVLILEVACGRKP 527
+ + +D+++ G+ + E+A GR P
Sbjct: 199 PSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 33/226 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRV---------SETSRQGKQEFIAEVTTI 368
N+ PK LG+G V + I + KE AVK + +E ++ ++ + EV +
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 369 GSLR-HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSV 427
+ H N+++L F LV++ M G L F + E +VTL+ ++ +
Sbjct: 65 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL--FDYLTE------KVTLSEKETRKI 116
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
+ + + LH + ++HRD+K NI+LD + N +L DFG + + K +E
Sbjct: 117 MRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK----LRE 169
Query: 488 IAGTPGYMAPESFLVGRAT------IETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE E D+++ GV++ + G P
Sbjct: 170 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
Query: 404 FIFYDETNSGPGEVTLNWEKRLSVIHG------TSQALDYLHNGSEKRVLHRDIKSSNIM 457
F + N G + +++L H S AL+YLH E+ +++RD+K N++
Sbjct: 86 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVL 142
Query: 458 LDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVL 517
LDSE + +L D+G+ + E L+ +T GTP Y+APE D +A GVL
Sbjct: 143 LDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVL 199
Query: 518 ILEVACGRKP 527
+ E+ GR P
Sbjct: 200 MFEMMAGRSP 209
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 325 NKLGKGGFGTVYKGI--WRNKEIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRHRNLVKLI 380
KLG+G +G VYK I N+ +A+KR+ E +G I EV+ + L+HRN+++L
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ H L++EY N L K++ + P +V++ K S ++ +++ H+
Sbjct: 100 SVIHHNHRLHLIFEYAEN-DLKKYM-----DKNP-DVSMRVIK--SFLYQLINGVNFCHS 150
Query: 441 GSEKRVLHRDIKSSNIMLD----SEFNA-RLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
+R LHRD+K N++L SE ++GDFGLAR + T EI T Y
Sbjct: 151 ---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEII-TLWYR 204
Query: 496 APESFLVGRATIETDIYAFGVLILEVAC 523
PE L R Y+ V I +AC
Sbjct: 205 PPEILLGSRH------YSTSVDIWSIAC 226
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
Query: 404 FIFYDETNSGPGEVTLNWEKRLSVIHG------TSQALDYLHNGSEKRVLHRDIKSSNIM 457
F + N G + +++L H S AL+YLH E+ +++RD+K N++
Sbjct: 82 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVL 138
Query: 458 LDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVL 517
LDSE + +L D+G+ + E L+ +T GTP Y+APE D +A GVL
Sbjct: 139 LDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVL 195
Query: 518 ILEVACGRKP 527
+ E+ GR P
Sbjct: 196 MFEMMAGRSP 205
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 18/220 (8%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQ---GKQEFIAEVTTIGSLRHR 374
F LGKGGFG V R K A K++ + + G+ + E + + R
Sbjct: 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR 244
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
+V L + YE D L + + NG KF Y +G E + ++
Sbjct: 245 FVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA--------RAVFYAAEI 295
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
L + +R+++RD+K NI+LD + R+ D GLA + E + K GT GY
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG----QTIKGRVGTVGY 351
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQN 534
MAPE R T D +A G L+ E+ G+ P Q ++
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 327 LGKGGFGTVYKGIWR--NKEIAVKRVSETSRQ---GKQEFIAEVTTIGSLRHRNLVKLIG 381
LGKGGFG V R K A K++ + + G+ + E + + R +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-A 250
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+ YE D L + + NG KF Y +G E + ++ L +
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA--------RAVFYAAEICCGLEDL 302
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+R+++RD+K NI+LD + R+ D GLA + E + K GT GYMAPE
Sbjct: 303 HRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG----QTIKGRVGTVGYMAPEVVK 358
Query: 502 VGRATIETDIYAFGVLILEVACGRKPGNQSEQN 534
R T D +A G L+ E+ G+ P Q ++
Sbjct: 359 NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
Query: 404 FIFYDETNSGPGEVTLNWEKRLSVIHG------TSQALDYLHNGSEKRVLHRDIKSSNIM 457
F + N G + +++L H S AL+YLH E+ +++RD+K N++
Sbjct: 129 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVL 185
Query: 458 LDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVL 517
LDSE + +L D+G+ + E L+ +T GTP Y+APE D +A GVL
Sbjct: 186 LDSEGHIKLTDYGMCK---EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVL 242
Query: 518 ILEVACGRKP 527
+ E+ GR P
Sbjct: 243 MFEMMAGRSP 252
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGKQEFIAEVTTIG- 369
++K +F LGKG FG V+ ++ N+ A+K + + + E T +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD--VECTMVEK 68
Query: 370 -----SLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKR 424
+ H L + + + V EY+ G L Y + +++
Sbjct: 69 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL----MYHIQSCHKFDLSRATFYA 124
Query: 425 LSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHS 484
+I G L +LH+ K +++RD+K NI+LD + + ++ DFG+ + EN+
Sbjct: 125 AEIILG----LQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAK 174
Query: 485 TKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSI 540
T GTP Y+APE L + D ++FGVL+ E+ G+ P + ++ +SI
Sbjct: 175 TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 325 NKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGKQ-EFIAEVTTIGSLRHRNLVKLIG 381
+KLG+G + TVYKG + + +A+K + +G I EV+ + L+H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+ LV+EY+ + L +++ D+ + +N + + L Y H
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYL--DDCGN-----IINMHNVKLFLFQLLRGLAYCHR- 118
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
++VLHRD+K N++++ +L DFGLAR KT+ + E+ + P L
Sbjct: 119 --QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN--EVVTL--WYRPPDIL 172
Query: 502 VGRATIET--DIYAFGVLILEVACGRK--PGNQSEQN 534
+G T D++ G + E+A GR PG+ E+
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ 209
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 326 KLGKGGFGTVYKGI-WRNKEIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRHRNLVKLIGW 382
K+G+G +G VYK + + +A+KR+ + +G I E++ + L H N+V LI
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 383 CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGS 442
+ LV+E+M L K + DE +G + + Q L + +
Sbjct: 88 IHSERCLTLVFEFM-EKDLKKVL--DENKTGLQDSQIKIY--------LYQLLRGVAHCH 136
Query: 443 EKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLV 502
+ R+LHRD+K N++++S+ +L DFGLAR ++++ T E+ T Y AP+ +
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVV-TLWYRAPDVLMG 193
Query: 503 GRA-TIETDIYAFGVLILEVACGR 525
+ + DI++ G + E+ G+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 326 KLGKGGFGTVYKGI-WRNKEIAVKRVS-ETSRQG-KQEFIAEVTTIGSLRHRNLVKLIGW 382
K+G+G +G VYK + + +A+KR+ + +G I E++ + L H N+V LI
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 383 CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGS 442
+ LV+E+M L K + DE +G + + Q L + +
Sbjct: 88 IHSERCLTLVFEFM-EKDLKKVL--DENKTGLQDSQIKIY--------LYQLLRGVAHCH 136
Query: 443 EKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLV 502
+ R+LHRD+K N++++S+ +L DFGLAR ++++ T E+ T Y AP+ +
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVV-TLWYRAPDVLMG 193
Query: 503 GRA-TIETDIYAFGVLILEVACGR 525
+ + DI++ G + E+ G+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 88/208 (42%), Gaps = 20/208 (9%)
Query: 328 GKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERH 387
+G FG V+K N +AVK +Q Q E+ + ++H NL++ I +R
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSE-REIFSTPGMKHENLLQFIA-AEKRG 81
Query: 388 DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN------- 440
L V ++ DK D + W + V S+ L YLH
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKGN----IITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 441 -GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
G + + HRD KS N++L S+ A L DFGLA + K T GT YMAPE
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPG-KPPGDTHGQVGTRRYMAPEV 196
Query: 500 F-----LVGRATIETDIYAFGVLILEVA 522
A + D+YA G+++ E+
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 321 FNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGK--QEFIAEVTTIGSLRHRNL 376
+N LGKG FG V K R +E AVK +++ S + K + EV + L H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS------VIHG 430
+KL + F +V E G L +DE KR S +I
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGEL-----FDEIIK---------RKRFSEHDAARIIKQ 129
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDS---EFNARLGDFGLARTIQENLKTHHSTKE 487
+ Y+H + ++HRD+K NI+L+S + + ++ DFGL+ Q+N K K+
Sbjct: 130 VFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK----MKD 182
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
GT Y+APE L G + D+++ GV++ + G P
Sbjct: 183 RIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 326 KLGKGGFGTVYKGIWRNKE-IAVKRVS-ETSRQG-KQEFIAEVTTIGSLRHRNLVKLIGW 382
K+G+G +G VYK E A+K++ E +G I E++ + L+H N+VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 383 CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGS 442
+ + +LV+E++ + L K + D G VT S + + Y H+
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLL--DVCEGGLESVTAK-----SFLLQLLNGIAYCHD-- 118
Query: 443 EKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLV 502
+RVLHRD+K N++++ E ++ DFGLAR + T EI T Y AP+ +
Sbjct: 119 -RRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIV-TLWYRAPDVLMG 174
Query: 503 GRATIET-DIYAFGVLILEVACG 524
+ T DI++ G + E+ G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNK----EIAVKRVSETSRQ-GKQEFIAEVTTIGSLRHR 374
+F P LG+GGFG V++ +NK A+KR+ +R+ +++ + EV + L H
Sbjct: 6 DFEPIQCLGRGGFGVVFEA--KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHP 63
Query: 375 NLVKLI-GWCYERHDFLL------VYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSV 427
+V+ W + L VY Y+ K D N G T+ +R
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN---GRCTIEERERSVC 120
Query: 428 IH---GTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLA---------RTI 475
+H ++A+++LH+ K ++HRD+K SNI + ++GDFGL +T+
Sbjct: 121 LHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 476 QENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV 521
+ + GT YM+PE + + DI++ G+++ E+
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 321 FNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGK--QEFIAEVTTIGSLRHRNL 376
+N LGKG FG V K R +E AVK +++ S + K + EV + L H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS------VIHG 430
+KL + F +V E G L +DE KR S +I
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGEL-----FDEIIK---------RKRFSEHDAARIIKQ 129
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDS---EFNARLGDFGLARTIQENLKTHHSTKE 487
+ Y+H + ++HRD+K NI+L+S + + ++ DFGL+ Q+N K K+
Sbjct: 130 VFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK----MKD 182
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
GT Y+APE L G + D+++ GV++ + G P
Sbjct: 183 RIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 114/242 (47%), Gaps = 42/242 (17%)
Query: 314 LKKATGNFNPKNK----LGKGGFGTVY--KGIWRNKEIAVKRVSE---TSRQGKQEFIAE 364
++ +T F+ + K LGKG FG V K +E AVK +S+ + K+ + E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKR 424
V + L H N++KL + ++ F LV E G L +DE S KR
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL-----FDEIIS---------RKR 122
Query: 425 LS------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDS---EFNARLGDFGLARTI 475
S +I + Y+H +++HRD+K N++L+S + N R+ DFGL+
Sbjct: 123 FSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179
Query: 476 QENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNS 535
+ + K K+ GT Y+APE L G + D+++ GV++ + G P N + N
Sbjct: 180 EASKK----MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGA--NE 232
Query: 536 YN 537
Y+
Sbjct: 233 YD 234
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 32/242 (13%)
Query: 301 GTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVY----KGIWRNKEIAVKRVSETSRQ 356
G + KK L E+ + KLG G +G V K + I + R + S
Sbjct: 25 GMFITSKKGHLSEM------YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS 78
Query: 357 GKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPG 415
+ + EV + L H N++KL + ++ ++ LV E G L D+ I + N
Sbjct: 79 SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDA 138
Query: 416 EVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDS-EFNA--RLGDFGLA 472
V + V+ G + YLH + ++HRD+K N++L+S E +A ++ DFGL+
Sbjct: 139 AVIIK-----QVLSGVT----YLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLS 186
Query: 473 RTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP-GNQS 531
+ K KE GT Y+APE L + + D+++ GV++ + G P G Q+
Sbjct: 187 AVFENQKK----MKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQT 241
Query: 532 EQ 533
+Q
Sbjct: 242 DQ 243
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 326 KLGKGGFGTVYKGIWRNKE-IAVKRVS-ETSRQG-KQEFIAEVTTIGSLRHRNLVKLIGW 382
K+G+G +G VYK E A+K++ E +G I E++ + L+H N+VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 383 CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGS 442
+ + +LV+E++ + L K + D G VT S + + Y H+
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLL--DVCEGGLESVTAK-----SFLLQLLNGIAYCHD-- 118
Query: 443 EKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLV 502
+RVLHRD+K N++++ E ++ DFGLAR + T E+ T Y AP+ +
Sbjct: 119 -RRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVV-TLWYRAPDVLMG 174
Query: 503 GRATIET-DIYAFGVLILEVACG 524
+ T DI++ G + E+ G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 327 LGKGGFGTVYK-GIWRNKEIAVKRVSETS----RQGKQEFIAEVTTIGSLRHRNLVKLIG 381
LGKGGF ++ KE+ ++ S +++ E++ SL H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 382 WCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ +E +DF+ +V E SL + + E + R V+ YLH
Sbjct: 89 F-FEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVL-----GCQYLHR 139
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
RV+HRD+K N+ L+ + ++GDFGLA ++ + K + GTP Y+APE
Sbjct: 140 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKTLCGTPNYIAPEVL 193
Query: 501 LVGRATIETDIYAFGVLILEVACGRKPGNQS 531
+ E D+++ G ++ + G+ P S
Sbjct: 194 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 29/234 (12%)
Query: 318 TGNFNPKNKLGKGGFGTVYKGIWRN--KEIAVKRVS--ETSRQGKQEFIAEVTTIGSLRH 373
T ++ +LGKG F V + + + +E A K ++ + S + Q+ E L+H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIH 429
N+V+L E LV++ + G L + I +Y E ++ IH
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS------------HCIH 137
Query: 430 GTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTK 486
++++++H + ++HRD+K N++L S+ +L DFGLA +Q +
Sbjct: 138 QILESVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG-- 192
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSI 540
AGTPGY++PE DI+A GV++ + G P +Q+ I
Sbjct: 193 -FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 245
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 327 LGKGGFGTVYK-GIWRNKEIAVKRVSETS----RQGKQEFIAEVTTIGSLRHRNLVKLIG 381
LGKGGF ++ KE+ ++ S +++ E++ SL H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 382 WCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ +E +DF+ +V E SL + + E + R V+ YLH
Sbjct: 85 F-FEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVL-----GCQYLHR 135
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
RV+HRD+K N+ L+ + ++GDFGLA ++ + K + GTP Y+APE
Sbjct: 136 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKTLCGTPNYIAPEVL 189
Query: 501 LVGRATIETDIYAFGVLILEVACGRKPGNQS 531
+ E D+++ G ++ + G+ P S
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 327 LGKGGFGTVYK-GIWRNKEIAVKRVSETS----RQGKQEFIAEVTTIGSLRHRNLVKLIG 381
LGKGGF ++ KE+ ++ S +++ E++ SL H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 382 WCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ +E +DF+ +V E SL + + E + R V+ YLH
Sbjct: 85 F-FEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVL-----GCQYLHR 135
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
RV+HRD+K N+ L+ + ++GDFGLA ++ + K + GTP Y+APE
Sbjct: 136 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKTLCGTPNYIAPEVL 189
Query: 501 LVGRATIETDIYAFGVLILEVACGRKPGNQS 531
+ E D+++ G ++ + G+ P S
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 326 KLGKGGFGTVYKGIWRNKE-IAVKRVS-ETSRQG-KQEFIAEVTTIGSLRHRNLVKLIGW 382
K+G+G +G VYK E A+K++ E +G I E++ + L+H N+VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 383 CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGS 442
+ + +LV+E++ + L K + D G VT S + + Y H+
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLL--DVCEGGLESVTAK-----SFLLQLLNGIAYCHD-- 118
Query: 443 EKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLV 502
+RVLHRD+K N++++ E ++ DFGLAR + T E+ T Y AP+ +
Sbjct: 119 -RRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVV-TLWYRAPDVLMG 174
Query: 503 GRATIET-DIYAFGVLILEVACG 524
+ T DI++ G + E+ G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 42/242 (17%)
Query: 314 LKKATGNFNPKNK----LGKGGFGTVY--KGIWRNKEIAVKRVSE---TSRQGKQEFIAE 364
++ +T F+ + K LGKG FG V K +E AVK +S+ + K+ + E
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 99
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKR 424
V + L H N++KL + ++ F LV E G L +DE S KR
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL-----FDEIIS---------RKR 145
Query: 425 LS------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDS---EFNARLGDFGLARTI 475
S +I + Y+H + +++HRD+K N++L+S + N R+ DFGL+
Sbjct: 146 FSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 202
Query: 476 QENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNS 535
+ + K K+ GT Y+APE L G + D+++ GV++ + G P N + N
Sbjct: 203 EASKK----MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGA--NE 255
Query: 536 YN 537
Y+
Sbjct: 256 YD 257
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 327 LGKGGFGTVYK-GIWRNKEIAVKRVSETS----RQGKQEFIAEVTTIGSLRHRNLVKLIG 381
LGKGGF ++ KE+ ++ S +++ E++ SL H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 382 WCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ +E +DF+ +V E SL + + E + R V+ YLH
Sbjct: 107 F-FEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVL-----GCQYLHR 157
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
RV+HRD+K N+ L+ + ++GDFGLA ++ + K + GTP Y+APE
Sbjct: 158 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKVLCGTPNYIAPEVL 211
Query: 501 LVGRATIETDIYAFGVLILEVACGRKPGNQS 531
+ E D+++ G ++ + G+ P S
Sbjct: 212 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 38/225 (16%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSE---TSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
LGKG FG V K +E AVK +S+ + K+ + EV + L H N++KL
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS------VIHGTSQAL 435
+ ++ F LV E G L +DE S KR S +I +
Sbjct: 118 FFEDKGYFYLVGEVYTGGEL-----FDEIIS---------RKRFSEVDAARIIRQVLSGI 163
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDS---EFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
Y+H + +++HRD+K N++L+S + N R+ DFGL+ + + K K+ GT
Sbjct: 164 TYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK----MKDKIGTA 216
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYN 537
Y+APE L G + D+++ GV++ + G P N + N Y+
Sbjct: 217 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGA--NEYD 258
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 29/221 (13%)
Query: 325 NKLGKGGFGTVY------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVK 378
KLG G +G V G R +I +K+ S T+ + EV + L H N++K
Sbjct: 10 KKLGSGAYGEVLLCKDKLTGAERAIKI-IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 68
Query: 379 LIGWCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
L + ++ ++ LV E G L D+ I + + V + V+ GT+ Y
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK-----QVLSGTT----Y 119
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
LH + ++HRD+K N++L+S+ ++ DFGL+ + + KE GT Y
Sbjct: 120 LHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS----AHFEVGGKMKERLGTAYY 172
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP-GNQSEQN 534
+APE L + + D+++ GV++ + CG P G Q++Q
Sbjct: 173 IAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQE 212
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 325 NKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIG--- 381
++GKG +G V+ G WR +++AVK V T+ + E+ +RH N++ I
Sbjct: 43 KQIGKGRYGEVWMGKWRGEKVAVK-VFFTTEEASWFRETEIYQTVLMRHENILGFIAADI 101
Query: 382 -----WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
W L+ +Y NGSL YD S TL+ + L + + + L
Sbjct: 102 KGTGSWT----QLYLITDYHENGSL-----YDYLKS----TTLDAKSMLKLAYSSVSGLC 148
Query: 437 YLH-----NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLA-RTIQENLKTHHSTKEIAG 490
+LH + + HRD+KS NI++ + D GLA + I + + G
Sbjct: 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVG 208
Query: 491 TPGYMAPESFLVG------RATIETDIYAFGVLILEVA 522
T YM PE ++ I D+Y+FG+++ EVA
Sbjct: 209 TKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 109/214 (50%), Gaps = 24/214 (11%)
Query: 327 LGKGGFGTVYK----GIWRN---KEIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG+G FG V + GI + + +AVK + E + + ++E+ + + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 378 KLIGWCYERHDFLLV-YEYMPNGSL--------DKFIFYDETNSGPGEVTLNWEKRLSVI 428
L+G C + L+V E+ G+L ++F+ Y E + L E +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 429 HGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI 488
++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++ + K
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGD 211
Query: 489 AGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 245
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 49/257 (19%)
Query: 314 LKKATGNFNPKNK----LGKGGFGTVY--KGIWRNKEIAVKRVSE---TSRQGKQEFIAE 364
++ +T F+ + K LGKG FG V K +E AVK +S+ + K+ + E
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 82
Query: 365 VTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKR 424
V + L H N++KL + ++ F LV E G L +DE S KR
Sbjct: 83 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL-----FDEIIS---------RKR 128
Query: 425 LS------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDS---EFNARLGDFGLARTI 475
S +I + Y+H +++HRD+K N++L+S + N R+ DFGL+
Sbjct: 129 FSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 185
Query: 476 QENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGN------ 529
+ + K K+ GT Y+APE L G + D+++ GV++ + G P N
Sbjct: 186 EASKK----MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYD 240
Query: 530 ---QSEQNSYNNSIVHW 543
+ E+ Y + W
Sbjct: 241 ILKKVEKGKYTFELPQW 257
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 29/221 (13%)
Query: 325 NKLGKGGFGTVY------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVK 378
KLG G +G V G R +I +K+ S T+ + EV + L H N++K
Sbjct: 27 KKLGSGAYGEVLLCKDKLTGAERAIKI-IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 379 LIGWCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
L + ++ ++ LV E G L D+ I + + V + V+ GT+ Y
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK-----QVLSGTT----Y 136
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
LH + ++HRD+K N++L+S+ ++ DFGL+ + + KE GT Y
Sbjct: 137 LHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS----AHFEVGGKMKERLGTAYY 189
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP-GNQSEQN 534
+APE L + + D+++ GV++ + CG P G Q++Q
Sbjct: 190 IAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQE 229
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 327 LGKGGFGTVYK-GIWRNKEIAVKRVSETS----RQGKQEFIAEVTTIGSLRHRNLVKLIG 381
LGKGGF ++ KE+ ++ S +++ E++ SL H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 382 WCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ +E +DF+ +V E SL + + E + R V+ YLH
Sbjct: 109 F-FEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVL-----GCQYLHR 159
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
RV+HRD+K N+ L+ + ++GDFGLA ++ + K + GTP Y+APE
Sbjct: 160 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKVLCGTPNYIAPEVL 213
Query: 501 LVGRATIETDIYAFGVLILEVACGRKPGNQS 531
+ E D+++ G ++ + G+ P S
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 134/332 (40%), Gaps = 55/332 (16%)
Query: 308 KFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE-----IAVKRVSE--TSRQGKQE 360
K +L+++ F LGKG FG+V + + ++ +AVK + + +E
Sbjct: 12 KEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEE 71
Query: 361 FIAEVTTIGSLRHRNLVKLIGWCYERHDF------LLVYEYMPNGSLDKFIFYDETNSGP 414
F+ E + H ++ KL+G +++ +M +G L F+ P
Sbjct: 72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP 131
Query: 415 GEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLART 474
+ L R V + ++YL S + +HRD+ + N ML + + DFGL+R
Sbjct: 132 FNLPLQTLVRFMV--DIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRK 186
Query: 475 IQENLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEVAC-GRKPGNQSE 532
I ++ + P ++A ES T+ +D++AFGV + E+ G+ P E
Sbjct: 187 IYSG--DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE 244
Query: 533 QNSYNNSIVHWLWELRRKGRILDAADSRLGGEFSEKEMEC---VLILGLACCHPNPHLRP 589
N I ++L +GG ++ EC V L C +P RP
Sbjct: 245 ----NAEIYNYL----------------IGGNRLKQPPECMEEVYDLMYQCWSADPKQRP 284
Query: 590 SMKTV----------LQVLSGEADPPVLPPER 611
S + L VLS DP + ER
Sbjct: 285 SFTCLRMELENILGHLSVLSTSQDPLYINIER 316
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 24/224 (10%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRV-SETSRQGK--QEFIAEVTTIGSLRHRNLVKL-- 379
LG GG V+ + + ++++AVK + ++ +R F E +L H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 380 IGWCYERHDFL--LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G L +V EY+ +L + + GP + ++ + VI QAL++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GP----MTPKRAIEVIADACQALNF 131
Query: 438 LH-NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
H NG ++HRD+K +NIM+ + ++ DFG+AR I ++ + T + GT Y++
Sbjct: 132 SHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNN 538
PE +D+Y+ G ++ EV G P G+ + +Y +
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQH 231
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 327 LGKGGFGTVYK-GIWRNKEIAVKRVSETSR----QGKQEFIAEVTTIGSLRHRNLVKLIG 381
LGKGGF ++ KE+ ++ S +++ E++ SL H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 382 WCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ +E +DF+ +V E SL + + E + R V+ YLH
Sbjct: 83 F-FEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVL-----GCQYLHR 133
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
RV+HRD+K N+ L+ + ++GDFGLA ++ + K + GTP Y+APE
Sbjct: 134 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKVLCGTPNYIAPEVL 187
Query: 501 LVGRATIETDIYAFGVLILEVACGRKPGNQS 531
+ E D+++ G ++ + G+ P S
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 42/235 (17%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRN----KEIAVKRVSETSRQGKQEFIAEVTTIGSL 371
+ +F LG+G FG V K RN + A+K++ T + ++EV + SL
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKA--RNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASL 59
Query: 372 RHRNLVKLIGWCYERHDFL-------------LVYEYMPNGSLDKFIFYDETNSGPGEVT 418
H+ +V+ ER +F+ + EY N +L I + N E
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY- 118
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
W + +AL Y+H+ ++HRD+K NI +D N ++GDFGLA+ + +
Sbjct: 119 --WR----LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 479 LK-----------THHSTKEIAGTPGYMAPESFL-VGRATIETDIYAFGVLILEV 521
L + + GT Y+A E G + D+Y+ G++ E+
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 33/226 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRV---------SETSRQGKQEFIAEVTTI 368
N+ PK LG+G V + I + KE AVK + +E ++ ++ + EV +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 369 GSLR-HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSV 427
+ H N+++L F LV++ M G L F + E +VTL+ ++ +
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL--FDYLTE------KVTLSEKETRKI 129
Query: 428 IHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
+ + + LH + ++HRD+K NI+LD + N +L DFG + + K +
Sbjct: 130 MRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK----LRS 182
Query: 488 IAGTPGYMAPESFLVGRAT------IETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE E D+++ GV++ + G P
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 108/226 (47%), Gaps = 30/226 (13%)
Query: 306 PKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW------RNKEIAVKRV-SETSRQGK 358
P F + LKK LG+G FG V + + +AVK + ++ Q +
Sbjct: 8 PTVFHKRYLKKI-------RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR 60
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHD--FLLVYEYMPNGSLDKFIFYDETNSGPGE 416
+ E+ + +L H +++K G C ++ + LV EY+P GSL ++
Sbjct: 61 SGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---------PR 111
Query: 417 VTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQ 476
++ + L + + YLH+ + +HR++ + N++LD++ ++GDFGLA+ +
Sbjct: 112 HSIGLAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
Query: 477 ENLKTHHSTKEIAGTPGY-MAPESFLVGRATIETDIYAFGVLILEV 521
E ++ +E +P + APE + +D+++FGV + E+
Sbjct: 169 EG-HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 327 LGKGGFGTVYKG--IWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
LG G FG V+K ++A K + + K+E E++ + L H NL++L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 385 ERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
++D +LV EY+ G L D+ I DE+ + T+ + K++ + + ++H +
Sbjct: 157 SKNDIVLVMEYVDGGELFDRII--DESYNLTELDTILFMKQI------CEGIRHMH---Q 205
Query: 444 KRVLHRDIKSSNIML---DSEFNARLGDFGLARTIQ--ENLKTHHSTKEIAGTPGYMAPE 498
+LH D+K NI+ D++ ++ DFGLAR + E LK + GTP ++APE
Sbjct: 206 MYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVNF------GTPEFLAPE 258
Query: 499 SFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWEL 547
+ TD+++ GV+ + G P N+I+ W+L
Sbjct: 259 VVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDL 307
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 117/277 (42%), Gaps = 41/277 (14%)
Query: 315 KKATGNFNPKNKLGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIG 369
KK +F LG+G F TV + + ++E A+K + + ++ K ++ E +
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRL 425
L H VKL + Y NG L K+I +DET + R
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RF 114
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
S AL+YLH K ++HRD+K NI+L+ + + ++ DFG A+ + K +
Sbjct: 115 YTAEIVS-ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 170
Query: 486 KEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW 545
GT Y++PE A +D++A G +I ++ G P + I+ +
Sbjct: 171 X-FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 229
Query: 546 -----------ELRRKGRILDAADSRLGGEFSEKEME 571
+L K +LDA RLG E EME
Sbjct: 230 DFPEKFFPKARDLVEKLLVLDAT-KRLGCE----EME 261
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 29/232 (12%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRVSE----TSRQG--KQEFIAEVTTIGSLRHRNLV 377
+LG G F V K + KE A K + + +SR+G ++E EV + +RH N++
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
L + D +L+ E + G L F F E S + + K Q LD
Sbjct: 72 TLHDIFENKTDVVLILELVSGGEL--FDFLAEKESLTEDEATQFLK---------QILDG 120
Query: 438 LHNGSEKRVLHRDIKSSNIML-DSEF---NARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
+H KR+ H D+K NIML D +L DFG+A I+ + K I GTP
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG----NEFKNIFGTPE 176
Query: 494 YMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHW 543
++APE +E D+++ GV+ + G P G ++ N S V++
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 117/277 (42%), Gaps = 41/277 (14%)
Query: 315 KKATGNFNPKNKLGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIG 369
KK +F LG+G F TV + + ++E A+K + + ++ K ++ E +
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRL 425
L H VKL + Y NG L K+I +DET + R
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RF 113
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
S AL+YLH K ++HRD+K NI+L+ + + ++ DFG A+ + K +
Sbjct: 114 YTAEIVS-ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 169
Query: 486 KEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW 545
GT Y++PE A +D++A G +I ++ G P + I+ +
Sbjct: 170 X-FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 228
Query: 546 -----------ELRRKGRILDAADSRLGGEFSEKEME 571
+L K +LDA RLG E EME
Sbjct: 229 DFPEKFFPKARDLVEKLLVLDAT-KRLGCE----EME 260
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 31/247 (12%)
Query: 306 PKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW------RNKEIAVKRVSE-TSRQGK 358
P F + LKK LG+G FG V + + +AVK + E Q +
Sbjct: 2 PTVFHKRYLKKI-------RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLR 54
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHD--FLLVYEYMPNGSLDKFIFYDETNSGPGE 416
+ E+ + +L H ++VK G C ++ + LV EY+P GSL ++
Sbjct: 55 SGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PR 105
Query: 417 VTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQ 476
+ + L + + YLH + +HR + + N++LD++ ++GDFGLA+ +
Sbjct: 106 HCVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVP 162
Query: 477 ENLKTHHSTKEIAGTPGY-MAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNS 535
E ++ +E +P + APE + +D+++FGV + E+ NQS
Sbjct: 163 EG-HEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL-TYCDSNQSPHTK 220
Query: 536 YNNSIVH 542
+ I H
Sbjct: 221 FTELIGH 227
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 117/277 (42%), Gaps = 41/277 (14%)
Query: 315 KKATGNFNPKNKLGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIG 369
KK +F LG+G F TV + + ++E A+K + + ++ K ++ E +
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRL 425
L H VKL + Y NG L K+I +DET + R
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RF 112
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
S AL+YLH K ++HRD+K NI+L+ + + ++ DFG A+ + K +
Sbjct: 113 YTAEIVS-ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 168
Query: 486 KEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW 545
GT Y++PE A +D++A G +I ++ G P + I+ +
Sbjct: 169 X-FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 227
Query: 546 -----------ELRRKGRILDAADSRLGGEFSEKEME 571
+L K +LDA RLG E EME
Sbjct: 228 DFPEKFFPKARDLVEKLLVLDAT-KRLGCE----EME 259
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 29/232 (12%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRVSE----TSRQG--KQEFIAEVTTIGSLRHRNLV 377
+LG G F V K + KE A K + + +SR+G ++E EV + +RH N++
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
L + D +L+ E + G L F F E S + + K Q LD
Sbjct: 79 TLHDIFENKTDVVLILELVSGGEL--FDFLAEKESLTEDEATQFLK---------QILDG 127
Query: 438 LHNGSEKRVLHRDIKSSNIML-DSEF---NARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
+H KR+ H D+K NIML D +L DFG+A I+ + K I GTP
Sbjct: 128 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG----NEFKNIFGTPE 183
Query: 494 YMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHW 543
++APE +E D+++ GV+ + G P G ++ N S V++
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY 235
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 113/247 (45%), Gaps = 31/247 (12%)
Query: 306 PKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW------RNKEIAVKRVSE-TSRQGK 358
P F + LKK LG+G FG V + + +AVK + E Q +
Sbjct: 3 PTVFHKRYLKKI-------RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLR 55
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHD--FLLVYEYMPNGSLDKFIFYDETNSGPGE 416
+ E+ + +L H ++VK G C ++ + LV EY+P GSL ++ G +
Sbjct: 56 SGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQ 113
Query: 417 VTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQ 476
+ L ++ + + YLH + +HR + + N++LD++ ++GDFGLA+ +
Sbjct: 114 LLLFAQQ-------ICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVP 163
Query: 477 ENLKTHHSTKEIAGTPGY-MAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNS 535
E ++ +E +P + APE + +D+++FGV + E+ NQS
Sbjct: 164 EG-HEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL-TYCDSNQSPHTK 221
Query: 536 YNNSIVH 542
+ I H
Sbjct: 222 FTELIGH 228
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 117/277 (42%), Gaps = 41/277 (14%)
Query: 315 KKATGNFNPKNKLGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIG 369
KK +F LG+G F TV + + ++E A+K + + ++ K ++ E +
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 370 SLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRL 425
L H VKL + Y NG L K+I +DET + R
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RF 111
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
S AL+YLH K ++HRD+K NI+L+ + + ++ DFG A+ + K +
Sbjct: 112 YTAEIVS-ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 167
Query: 486 KEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW 545
GT Y++PE A +D++A G +I ++ G P + I+ +
Sbjct: 168 X-FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 226
Query: 546 -----------ELRRKGRILDAADSRLGGEFSEKEME 571
+L K +LDA RLG E EME
Sbjct: 227 DFPEKFFPKARDLVEKLLVLDAT-KRLGCE----EME 258
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 306 PKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW------RNKEIAVKRV-SETSRQGK 358
P F + LKK LG+G FG V + + +AVK + ++ Q +
Sbjct: 25 PTVFHKRYLKKI-------RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR 77
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYER--HDFLLVYEYMPNGSLDKFIFYDETNSGPGE 416
+ E+ + +L H +++K G C + LV EY+P GSL ++
Sbjct: 78 SGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---------PR 128
Query: 417 VTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQ 476
++ + L + + YLH + +HRD+ + N++LD++ ++GDFGLA+ +
Sbjct: 129 HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185
Query: 477 ENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEV 521
E + + ++ + APE + +D+++FGV + E+
Sbjct: 186 EGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 29/232 (12%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRVSE----TSRQG--KQEFIAEVTTIGSLRHRNLV 377
+LG G F V K + KE A K + + +SR+G ++E EV + +RH N++
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
L + D +L+ E + G L F+ E+ + E T ++ L +H Y
Sbjct: 93 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLT-EDEATQFLKQILDGVH-------Y 144
Query: 438 LHNGSEKRVLHRDIKSSNIML-DSEF---NARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
LH+ KR+ H D+K NIML D +L DFG+A I+ + K I GTP
Sbjct: 145 LHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG----NEFKNIFGTPE 197
Query: 494 YMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHW 543
++APE +E D+++ GV+ + G P G ++ N S V++
Sbjct: 198 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY 249
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 43/266 (16%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 103
Query: 382 WCYERHDFLLV-YEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+C++ + L Y NG L K+I +DET + R S AL+
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALE 151
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
YLH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++
Sbjct: 152 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX-FVGTAQYVS 207
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW----------- 545
PE A +D++A G +I ++ G P + I+ +
Sbjct: 208 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 267
Query: 546 ELRRKGRILDAADSRLGGEFSEKEME 571
+L K +LDA RLG E EME
Sbjct: 268 DLVEKLLVLDAT-KRLGCE----EME 288
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRV-SETSRQGK--QEFIAEVTTIGSLRHRNLVKL-- 379
LG GG V+ + + ++++AVK + ++ +R F E +L H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 380 IGWCYERHDFL--LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G L +V EY+ +L + + GP + ++ + VI QAL++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GP----MTPKRAIEVIADACQALNF 131
Query: 438 LH-NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
H NG ++HRD+K +NIM+ + ++ DFG+AR I ++ + T + GT Y++
Sbjct: 132 SHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKP 527
PE +D+Y+ G ++ EV G P
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 327 LGKGGFGTVYK----GIWRN---KEIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG+G FG V + GI + + +AVK + E + + ++E+ + + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 378 KLIGWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVT--------LNWEKRLSVI 428
L+G C + +++ E+ G+L ++ P +V L E +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 429 HGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI 488
++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++ + K
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGD 209
Query: 489 AGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 107/226 (47%), Gaps = 30/226 (13%)
Query: 306 PKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW------RNKEIAVKRV-SETSRQGK 358
P F + LKK LG+G FG V + + +AVK + ++ Q +
Sbjct: 8 PTVFHKRYLKKI-------RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR 60
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHD--FLLVYEYMPNGSLDKFIFYDETNSGPGE 416
+ E+ + +L H +++K G C ++ + LV EY+P GSL ++
Sbjct: 61 SGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---------PR 111
Query: 417 VTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQ 476
++ + L + + YLH + +HR++ + N++LD++ ++GDFGLA+ +
Sbjct: 112 HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
Query: 477 ENLKTHHSTKEIAGTPGY-MAPESFLVGRATIETDIYAFGVLILEV 521
E ++ +E +P + APE + +D+++FGV + E+
Sbjct: 169 EG-HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
K +++RD+K N+MLDSE + ++ DFG+ + EN+ +TK GTP Y+APE
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQ 196
Query: 504 RATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIV 541
D +AFGVL+ E+ G+ P +++ SI+
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 234
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 327 LGKGGFGTVYK----GIWRN---KEIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG+G FG V + GI + + +AVK + E + + ++E+ + + H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 378 KLIGWCYERHDFLLV-YEYMPNGSLDKFIFYDETNSGPGEVT--------LNWEKRLSVI 428
L+G C + L+V E+ G+L ++ P +V L E +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 429 HGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI 488
++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++ + K
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGD 246
Query: 489 AGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 280
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRV-SETSRQGK--QEFIAEVTTIGSLRHRNLVKL-- 379
LG GG V+ + + ++++AVK + ++ +R F E +L H +V +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 380 IGWCYERHDFL--LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G L +V EY+ +L + + GP + ++ + VI QAL++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GP----MTPKRAIEVIADACQALNF 131
Query: 438 LH-NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
H NG ++HRD+K +NIM+ + ++ DFG+AR I ++ + T + GT Y++
Sbjct: 132 SHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKP 527
PE +D+Y+ G ++ EV G P
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 34/225 (15%)
Query: 315 KKATGNFNPKNKLGKGGFGTV-----YKGIWRNKEIAVKRVSETSRQGKQEFIA---EVT 366
K+ G + + LG+G FG V YK +++A+K +S + + E++
Sbjct: 5 KRHIGPYIIRETLGEGSFGKVKLATHYKT---QQKVALKFISRQLLKKSDMHMRVEREIS 61
Query: 367 TIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
+ LRH +++KL D ++V EY D + G
Sbjct: 62 YLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGR---------R 112
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN--LKTHHS 484
A++Y H +++HRD+K N++LD N ++ DFGL+ + + LKT
Sbjct: 113 FFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS-- 167
Query: 485 TKEIAGTPGYMAPESFLVGR--ATIETDIYAFGVLILEVACGRKP 527
G+P Y APE + G+ A E D+++ G+++ + GR P
Sbjct: 168 ----CGSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 116/219 (52%), Gaps = 25/219 (11%)
Query: 320 NFNPKNKLGKGGFGTVYK--GIWRNKEIAVKRVSET--SRQGKQEFIAEVTTIGSLRHRN 375
+ P +LG+G +G V K + + +AVKR+ T S++ K+ + ++ ++
Sbjct: 8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPF 67
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
V G + D + E M + SLDKF D+ + P ++ +++V +
Sbjct: 68 TVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDIL----GKIAV--SIVK 120
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI-AGTP 492
AL++LH S+ V+HRD+K SN+++++ ++ DFG++ + +++ K+I AG
Sbjct: 121 ALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV-----AKDIDAGCK 173
Query: 493 GYMAPESF---LVGRA-TIETDIYAFGVLILEVACGRKP 527
YMAPE L + ++++DI++ G+ ++E+A R P
Sbjct: 174 PYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 327 LGKGGFGTVYKG--IWRNKEIAVKRVSETSRQGKQEFI-AEVTTIGSLRHRNLVKLIGWC 383
+G GGF V I + +A+K + + + I E+ + +LRH+++ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
+ +V EY P G L +I + L+ E+ V A+ Y+H+
Sbjct: 78 ETANKIFMVLEYCPGGELFDYII--------SQDRLSEEETRVVFRQIVSAVAYVHS--- 126
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRD+K N++ D +L DFGL + N H T G+ Y APE + G
Sbjct: 127 QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT--CCGSLAYAAPE-LIQG 183
Query: 504 RATI--ETDIYAFGVLILEVACGRKP 527
++ + E D+++ G+L+ + CG P
Sbjct: 184 KSYLGSEADVWSMGILLYVLMCGFLP 209
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRV-SETSRQGK--QEFIAEVTTIGSLRHRNLVKLIG 381
LG GG V+ + + ++++AVK + ++ +R F E +L H +V +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 382 WCYERHDF----LLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+V EY+ +L + + GP + ++ + VI QAL++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GP----MTPKRAIEVIADACQALNF 131
Query: 438 LH-NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
H NG ++HRD+K +NIM+ + ++ DFG+AR I ++ + T + GT Y++
Sbjct: 132 SHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKP 527
PE +D+Y+ G ++ EV G P
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 43/257 (16%)
Query: 301 GTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRN--KEIAVKRVSETS---- 354
G + P + K+ K ++ KLG G +G V +N E A+K + ++
Sbjct: 18 GIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKG 77
Query: 355 ---------RQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI 405
+ +E E++ + SL H N++KL ++ F LV E+ G L + I
Sbjct: 78 RYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI 137
Query: 406 F----YDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSE 461
+DE ++ +++ + YLH + ++HRDIK NI+L+++
Sbjct: 138 INRHKFDECDAA------------NIMKQILSGICYLHKHN---IVHRDIKPENILLENK 182
Query: 462 ---FNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLI 518
N ++ DFGL+ ++ K ++ GT Y+APE L + + D+++ GV++
Sbjct: 183 NSLLNIKIVDFGLSSFFSKDYK----LRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIM 237
Query: 519 LEVACGRKP-GNQSEQN 534
+ CG P G Q++Q+
Sbjct: 238 YILLCGYPPFGGQNDQD 254
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 327 LGKGGFGTVYK----GIWRN---KEIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG+G FG V + GI + + +AVK + E + + ++E+ + + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 378 KLIGWCYERHDFLLVY-EYMPNGSLDKFIFYDETNSGPGEVT--------LNWEKRLSVI 428
L+G C + L+V E+ G+L ++ P +V L E +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 429 HGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI 488
++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++ + K
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGD 200
Query: 489 AGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 36/230 (15%)
Query: 327 LGKGGFGTV-----------YKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRN 375
+GKG FG V Y + NK+ V+R + E+ + L H
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVER------NEVRNVFKELQIMQGLEHPF 76
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
LV L + D +V + + G L ++ + N E T+ I AL
Sbjct: 77 LVNLWYSFQDEEDMFMVVDLLLGGDLR---YHLQQNVHFKEETVKL-----FICELVMAL 128
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
DYL N +R++HRD+K NI+LD + + DF +A + +T +T +AGT YM
Sbjct: 129 DYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT--MAGTKPYM 181
Query: 496 APESFLVGRA---TIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVH 542
APE F + + D ++ GV E+ GR+P + S + IVH
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS-SKEIVH 230
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Query: 304 LAPKKFRLKELKKATGNFNPKNKLGKGGFGTVY--KGIWRNKEIAVKRV-SETSRQGK-- 358
L P+ + + + LG GG V+ + + ++++AVK + ++ +R
Sbjct: 14 LVPRGSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFY 73
Query: 359 QEFIAEVTTIGSLRHRNLVKL--IGWCYERHDFL--LVYEYMPNGSLDKFIFYDETNSGP 414
F E +L H +V + G L +V EY+ +L + GP
Sbjct: 74 LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH----TEGP 129
Query: 415 GEVTLNWEKRLSVIHGTSQALDYLH-NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR 473
+ ++ + VI QAL++ H NG ++HRD+K +NIM+ + ++ DFG+AR
Sbjct: 130 ----MTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIAR 181
Query: 474 TIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
I ++ + T + GT Y++PE +D+Y+ G ++ EV G P
Sbjct: 182 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
K +++RD+K N+MLDSE + ++ DFG+ + EN+ +TK GTP Y+APE
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 504 RATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIV 541
D +AFGVL+ E+ G+ P +++ SI+
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 555
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSE---TSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
LGKG FG V K +E AVK +S+ + K+ + EV + L H N+ KL
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 382 WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS------VIHGTSQAL 435
+ ++ F LV E G L +DE S KR S +I +
Sbjct: 94 FFEDKGYFYLVGEVYTGGEL-----FDEIIS---------RKRFSEVDAARIIRQVLSGI 139
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDS---EFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
Y H +++HRD+K N++L+S + N R+ DFGL+ + + K K+ GT
Sbjct: 140 TYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK----XKDKIGTA 192
Query: 493 GYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGN 529
Y+APE L G + D+++ GV++ + G P N
Sbjct: 193 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 327 LGKGGFGTVYK----GIWRN---KEIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG+G FG V + GI + + +AVK + E + + ++E+ + + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 378 KLIGWCYERHDFLLVY-EYMPNGSLDKFIFYDETNSGPGEVT--------LNWEKRLSVI 428
L+G C + L+V E+ G+L ++ P +V L E +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 429 HGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI 488
++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++ + K
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGD 200
Query: 489 AGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVK----RVSETSRQGKQEFIAEVTTIGSLRHRNLVKLI- 380
++G+G F TVYKG+ + V + + ++ +Q F E + L+H N+V+
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 381 GW---CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
W + +LV E +G+L ++ +V +W +++ + L +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYL--KRFKVXKIKVLRSWCRQI------LKGLQF 144
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEF-NARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
LH + ++HRD+K NI + + ++GD GLA LK K + GTP + A
Sbjct: 145 LHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLA-----TLKRASFAKAVIGTPEFXA 198
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKPGNQSE 532
PE + + D+YAFG LE A P ++ +
Sbjct: 199 PEXY-EEKYDESVDVYAFGXCXLEXATSEYPYSECQ 233
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 100 TFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 147
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 148 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS-FVGTAQYVSP 203
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A+ +D++A G +I ++ G P + I+ + +
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 263
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 264 LVEKLLVLDAT-KRLGCE----EME 283
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 106/214 (49%), Gaps = 24/214 (11%)
Query: 327 LGKGGFGTVYK----GIWRN---KEIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG+G FG V + GI + + +AVK + E + + ++E+ + + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 378 KLIGWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVT--------LNWEKRLSVI 428
L+G C + +++ E+ G+L ++ P +V L E +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 429 HGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI 488
++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++ K
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD--PDXVRKGD 209
Query: 489 AGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
Query: 324 KNKLGKGGFGTVYKGIWRNK--EIAVKRVSETSRQGKQEFI-AEVTTIGSLRHRNLVKLI 380
K KLG G FG V+ R+ E +K +++ Q E I AE+ + SL H N++K+
Sbjct: 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIF 86
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ H+ +V E G L + I + L+ ++ AL Y H+
Sbjct: 87 EVFEDYHNMYIVMETCEGGELLERIVSAQARGK----ALSEGYVAELMKQMMNALAYFHS 142
Query: 441 GSEKRVLHRDIKSSNIML-DSEFNA--RLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
+ V+H+D+K NI+ D+ ++ ++ DFGLA + + HST AGT YMAP
Sbjct: 143 ---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD---EHSTN-AAGTALYMAP 195
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKP 527
E F T + DI++ GV++ + G P
Sbjct: 196 EVF-KRDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 35/242 (14%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNKEI----AVKRVSETSRQGKQEF---IAEVTTIGSLR 372
NF LGKG FG V + R KE AVK + + + + E + R
Sbjct: 24 NFEFIRVLGKGSFGKVM--LARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 373 HRNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGT 431
+ + + C++ D V E++ G L +F+ + + E + +
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAEII---- 134
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGT 491
AL +LH+ K +++RD+K N++LD E + +L DFG+ + E + +T GT
Sbjct: 135 -SALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGT 187
Query: 492 PGYMAPE---SFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNS-----YNNSIVHW 543
P Y+APE L G A D +A GVL+ E+ CG P ++ N+ +V+
Sbjct: 188 PDYIAPEILQEMLYGPA---VDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP 244
Query: 544 LW 545
W
Sbjct: 245 TW 246
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 25/230 (10%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIW-RNKEIAVKRVSETSRQGKQEFIAEVTTIG 369
L L+ G F +G G +G VYKG + ++A +V + + ++E E+ +
Sbjct: 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLK 75
Query: 370 SL-RHRNLVKLIGWCYERH------DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWE 422
HRN+ G +++ LV E+ GS+ I + N TL E
Sbjct: 76 KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN------TLKEE 129
Query: 423 KRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTH 482
+ + L +LH + +V+HRDIK N++L +L DFG++ + +
Sbjct: 130 WIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR 186
Query: 483 HSTKEIAGTPGYMAPESFLVGR---AT--IETDIYAFGVLILEVACGRKP 527
++ GTP +MAPE AT ++D+++ G+ +E+A G P
Sbjct: 187 NT---FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 106/214 (49%), Gaps = 24/214 (11%)
Query: 327 LGKGGFGTVYK----GIWRN---KEIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG+G FG V + GI + + +AVK + E + + ++E+ + + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 378 KLIGWCYERHDFLLVY-EYMPNGSLDKFIFYDETNSGPGEVT--------LNWEKRLSVI 428
L+G C + L+V E+ G+L ++ P +V L E +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 429 HGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI 488
++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++ K
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD--PDXVRKGD 200
Query: 489 AGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 106/214 (49%), Gaps = 24/214 (11%)
Query: 327 LGKGGFGTVYK----GIWRN---KEIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG+G FG V + GI + + +AVK + E + + ++E+ + + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 378 KLIGWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVT--------LNWEKRLSVI 428
L+G C + +++ E+ G+L ++ P +V L E +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 429 HGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI 488
++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++ K
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDXVRKGD 209
Query: 489 AGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRV-SETSRQGK--QEFIAEVTTIGSLRHRNLVKL-- 379
LG GG V+ + + ++++AVK + ++ +R F E +L H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 380 IGWCYERHDFL--LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G L +V EY+ +L + + GP + ++ + VI QAL++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GP----MTPKRAIEVIADACQALNF 131
Query: 438 LH-NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
H NG ++HRD+K +NI++ + ++ DFG+AR I ++ + T + GT Y++
Sbjct: 132 SHQNG----IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLS 187
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKP 527
PE +D+Y+ G ++ EV G P
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 106/214 (49%), Gaps = 24/214 (11%)
Query: 327 LGKGGFGTVYK----GIWRN---KEIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG+G FG V + GI + + +AVK + E + + ++E+ + + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 378 KLIGWCYERHDFLLV-YEYMPNGSLDKFIFYDETNSGPGEVT--------LNWEKRLSVI 428
L+G C + L+V E+ G+L ++ P +V L E +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 429 HGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI 488
++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++ K
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD--PDXVRKGD 200
Query: 489 AGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I
pdb|1FX5|B Chain B, Crystal Structure Analysis Of Ulex Europaeus Lectin I
pdb|1JXN|A Chain A, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|B Chain B, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|C Chain C, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|D Chain D, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
Length = 242
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 14/219 (6%)
Query: 27 LHFNFQSFTEQNRNELSFD-NSTVAKSAIQVTYDVRGAPITNQSGRAIYKDQFQLWRDNK 85
L F F++F+ QN +LSF N++V ++ + V G A Y +W N
Sbjct: 4 LSFKFKNFS-QNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNCNT 62
Query: 86 NVKATFSTTFVLNILNQTAQP---GEGLAFVIAGNKDLPENSEGQWLGIVNGITNGTNQS 142
A+F T+F + +A P +GL F +A D P G + G+ N T +
Sbjct: 63 GELASFITSFSF-FMETSANPKAATDGLTFFLAP-PDSPLRRAGGYFGLFND-TKCDSSY 119
Query: 143 QIVAIEFDTKKSYEQ--DINDNHVGLDVNSVYSIRQVPLT-RVNLANGTDIKVQVRYDGQ 199
Q VA+EFDT S D H+G+DVN V SI R L N ++++ +
Sbjct: 120 QTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNKRYGLNNVANVEIIYEASSK 179
Query: 200 NITV---FVANMETPLLSEPIDLSEYLPEKVFVGFSAST 235
+T + ++ + ++ +DL E LPE V VGFS ST
Sbjct: 180 TLTASLTYPSDQTSISVTSIVDLKEILPEWVSVGFSGST 218
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 29/234 (12%)
Query: 318 TGNFNPKNKLGKGGFGTVYKGI--WRNKEIAVKRVS--ETSRQGKQEFIAEVTTIGSLRH 373
T + +GKG F V + + E A K ++ + S + Q+ E L+H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIH 429
N+V+L E LV++ + G L + I +Y E ++ H
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---------------H 107
Query: 430 GTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTK 486
Q L+ + + + V+HRD+K N++L S+ +L DFGLA +Q + +
Sbjct: 108 CIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG-- 165
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSI 540
AGTPGY++PE DI+A GV++ + G P +Q+ I
Sbjct: 166 -FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 218
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 145
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 146 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX-FVGTAQYVSP 201
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 261
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 262 LVEKLLVLDAT-KRLGCE----EME 281
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 148
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 149 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX-FVGTAQYVSP 204
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 264
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 265 LVEKLLVLDAT-KRLGCE----EME 284
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 145
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 146 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANA-FVGTAQYVSP 201
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 261
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 262 LVEKLLVLDAT-KRLGCE----EME 281
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 148
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 149 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS-FVGTAQYVSP 204
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 264
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 265 LVEKLLVLDAT-KRLGCE----EME 284
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 147
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 148 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX-FVGTAQYVSP 203
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 263
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 264 LVEKLLVLDAT-KRLGCE----EME 283
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 145
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 146 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX-FVGTAQYVSP 201
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 261
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 262 LVEKLLVLDAT-KRLGCE----EME 281
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 81
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 82 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 129
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 130 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX-FVGTAQYVSP 185
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 186 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 245
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 246 LVEKLLVLDAT-KRLGCE----EME 265
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 102
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 103 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 150
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 151 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX-FVGTAQYVSP 206
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 207 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARD 266
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 267 LVEKLLVLDAT-KRLGCE----EME 286
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 147
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 148 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX-FVGTAQYVSP 203
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 263
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 264 LVEKLLVLDAT-KRLGCE----EME 283
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 32/238 (13%)
Query: 300 NGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQG 357
NG + + K + +++KK F K LG G F V + K AVK + + + +G
Sbjct: 6 NGESSSSWKKQAEDIKKI---FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKG 62
Query: 358 KQEFIA-EVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSL-DKFI---FYDETNS 412
K+ I E+ + ++H N+V L + LV + + G L D+ + FY E ++
Sbjct: 63 KESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDA 122
Query: 413 GPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIML---DSEFNARLGDF 469
++I A+ YLH ++HRD+K N++ D E + DF
Sbjct: 123 S------------TLIRQVLDAVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDF 167
Query: 470 GLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
GL++ E ST GTPGY+APE + D ++ GV+ + CG P
Sbjct: 168 GLSKM--EGKGDVMSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 147
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 148 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX-FVGTAQYVSP 203
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 263
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 264 LVEKLLVLDAT-KRLGCE----EME 283
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 144
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 145 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX-FVGTAQYVSP 200
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 260
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 261 LVEKLLVLDAT-KRLGCE----EME 280
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 113/217 (52%), Gaps = 21/217 (9%)
Query: 320 NFNPKNKLGKGGFGTVYK--GIWRNKEIAVKRVSET--SRQGKQEFIAEVTTIGSLRHRN 375
+ P +LG+G +G V K + + +AVKR+ T S++ K+ + ++ ++
Sbjct: 52 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPF 111
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
V G + D + E M + SLDKF Y + + + +++V +AL
Sbjct: 112 TVTFYGALFREGDVWICMELM-DTSLDKF--YKQVIDKGQTIPEDILGKIAV--SIVKAL 166
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI-AGTPGY 494
++LH S+ V+HRD+K SN+++++ ++ DFG++ + +++ K I AG Y
Sbjct: 167 EHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV-----AKTIDAGCKPY 219
Query: 495 MAPESF---LVGRA-TIETDIYAFGVLILEVACGRKP 527
MAPE L + ++++DI++ G+ ++E+A R P
Sbjct: 220 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 256
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 147
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 148 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX-FVGTAQYVSP 203
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARD 263
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 264 LVEKLLVLDAT-KRLGCE----EME 283
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 29/240 (12%)
Query: 321 FNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVTTIGSLR 372
++ +LG G F V K G+ + KR +++SR+G +++ EV+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N++ L + D +L+ E + G L F F E S E + K+ +++G
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQ--ILNGVY 128
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIML-DSEF---NARLGDFGLARTIQENLKTHHSTKEI 488
YLH+ ++ H D+K NIML D ++ DFGLA I + K I
Sbjct: 129 ----YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNI 177
Query: 489 AGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWE 546
GTP ++APE +E D+++ GV+ + G P G+ ++ N S V++ +E
Sbjct: 178 FGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 144
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 145 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS-FVGTAQYVSP 200
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 260
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 261 LVEKLLVLDAT-KRLGCE----EME 280
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F TV + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 147
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 148 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX-FVGTAQYVSP 203
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 204 ELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARD 263
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 264 LVEKLLVLDAT-KRLGCE----EME 283
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 30/216 (13%)
Query: 321 FNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVK 378
F +++LG+G VY+ + K A+K + +T K+ E+ + L H N++K
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIK 112
Query: 379 LIGWCYERHDFLLVYEYMPNGSL-DKFI---FYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
L + LV E + G L D+ + +Y E ++ + +A
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA------------DAVKQILEA 160
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDS---EFNARLGDFGLARTIQENLKTHHSTKEIAGT 491
+ YLH E ++HRD+K N++ + + ++ DFGL++ ++ + K + GT
Sbjct: 161 VAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV----LMKTVCGT 213
Query: 492 PGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
PGY APE E D+++ G++ + CG +P
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFI-----AEV 365
++K + + LG+G F TVYK +N +A+K++ R ++ I E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 366 TTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRL 425
+ L H N++ L+ + + LV+++M L+ I + P +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIK------- 115
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI-QENLKTHHS 484
+ + T Q L+YLH + +LHRD+K +N++LD +L DFGLA++ N H
Sbjct: 116 AYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQ 172
Query: 485 TKEIAGTPGYMAPESFLVGRAT-IETDIYAFGVLILEV 521
T Y APE R + D++A G ++ E+
Sbjct: 173 VV----TRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 321 FNPKNKLGKGGFGTVYK----GIWRN---KEIAVKRVSETSRQGKQE-FIAEVTTIGSL- 371
N LG+G FG V + GI + + +AVK + E + + ++E+ + +
Sbjct: 30 LNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 89
Query: 372 RHRNLVKLIGWCYERHDFLLV-YEYMPNGSLDKFIFYDETNSGPGEVT-------LNWEK 423
H N+V L+G C + L+V E+ G+L ++ P + L E
Sbjct: 90 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 424 RLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHH 483
+ ++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD--PDX 204
Query: 484 STKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
K A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 326 KLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
K+G+G +GTV+K +N+E +A+KRV + + E+ + L+H+N+V+L
Sbjct: 9 KIGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
+ LV+E+ + L K+ +D N L+ E S + + L + H
Sbjct: 67 HDVLHSDKKLTLVFEFC-DQDLKKY--FDSCNGD-----LDPEIVKSFLFQLLKGLGFCH 118
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
+ + VLHRD+K N++++ +L DFGLAR ++ + + E+ + P
Sbjct: 119 S---RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY--SAEVVTL--WYRPPD 171
Query: 500 FLVGRATIET--DIYAFGVLILEVACGRKP 527
L G T D+++ G + E+A +P
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 29/227 (12%)
Query: 325 NKLGKGGFGTVYK--GIWRNKEIAVKRVS--ETSRQGKQEFIAEVTTIGSLRHRNLVKLI 380
+LGKG F V + + +E A K ++ + S + Q+ E L+H N+V+L
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
E L+++ + G L + I +Y E ++ H Q L+
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---------------HCIQQILE 132
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
+ + + V+HRD+K N++L S+ +L DFGLA ++ + AGTPG
Sbjct: 133 AVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG---FAGTPG 189
Query: 494 YMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSI 540
Y++PE D++A GV++ + G P +Q+ I
Sbjct: 190 YLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI 236
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 42/234 (17%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRN----KEIAVKRVSETSRQGKQEFIAEVTTIGSL 371
+ +F LG+G FG V K RN + A+K++ T + ++EV + SL
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKA--RNALDSRYYAIKKIRHTE-EKLSTILSEVXLLASL 59
Query: 372 RHRNLVKLIGWCYERHDFL-------------LVYEYMPNGSLDKFIFYDETNSGPGEVT 418
H+ +V+ ER +F+ + EY N +L I + N E
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY- 118
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
W + +AL Y+H+ ++HR++K NI +D N ++GDFGLA+ + +
Sbjct: 119 --WR----LFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 479 LK-----------THHSTKEIAGTPGYMAPESFL-VGRATIETDIYAFGVLILE 520
L + + GT Y+A E G + D Y+ G++ E
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 133/296 (44%), Gaps = 41/296 (13%)
Query: 321 FNPKNKLGKGGFGTVYK----GIWRN---KEIAVKRVSETSRQGKQE-FIAEVTTIGSL- 371
N LG+G FG V + GI + + +AVK + E + + ++E+ + +
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 372 RHRNLVKLIGWCYERH-DFLLVYEYMPNGSLDKFIFYDETNSGPGEVT----LNWEKRLS 426
H N+V L+G C + +++ E+ G+L ++ P + L E +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++ + K
Sbjct: 149 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKD--PDYVRK 203
Query: 487 EIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV---ACGRKPGNQSEQNSYNNSIVH 542
A P +MAPE+ TI++D+++FGVL+ E+ PG + ++
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--------- 254
Query: 543 WLWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQVL 598
E R+ L +++ EM + L C H P RP+ +++ L
Sbjct: 255 ---EFXRR---LKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 20/216 (9%)
Query: 321 FNPKNKLGKGGFGTVYK----GIWRN---KEIAVKRVSETSRQGKQE-FIAEVTTIGSL- 371
N LG+G FG V + GI + + +AVK + E + + ++E+ + +
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 372 RHRNLVKLIGWCYERHDFLLV-YEYMPNGSLDKFIFYDETNSGPGEVT----LNWEKRLS 426
H N+V L+G C + L+V E+ G+L ++ P + L E +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++ + K
Sbjct: 149 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRK 203
Query: 487 EIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|1QMO|E Chain E, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|F Chain F, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|G Chain G, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|H Chain H, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
Length = 133
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 142 SQIVAIEFDTKKSYEQ-DINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQN 200
S +VA+EFDT + + D N H+G+DVNS IR + + NG + Y+ +
Sbjct: 1 SNVVAVEFDTYLNPDYGDPNYIHIGIDVNS---IRSKVTAKWDWQNGKIATAHISYNSVS 57
Query: 201 ----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAFDGS 252
+T + A + LS I+L LPE V VG SASTG D + N V SW+F S
Sbjct: 58 KRLSVTSYYAGSKPATLSYDIELHTVLPEWVRVGLSASTGQDKERNTVHSWSFTSS 113
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 105/244 (43%), Gaps = 27/244 (11%)
Query: 294 DIEGLINGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTV--YKGIWRNKEIAVKRVS 351
+I+ +N KK R ++K +++ +G+G FG V + K A+K +S
Sbjct: 52 NIDNFLNRYEKIVKKIRGLQMKAE--DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLS 109
Query: 352 --ETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFL-LVYEYMPNGSLDKFIF-Y 407
E ++ F E I + + V + ++ +L +V EYMP G L + Y
Sbjct: 110 KFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY 169
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLG 467
D V W K + ALD +H+ ++HRD+K N++LD + +L
Sbjct: 170 D--------VPEKWAKFYTA--EVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLA 216
Query: 468 DFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLV----GRATIETDIYAFGVLILEVAC 523
DFG + E H T GTP Y++PE G E D ++ GV + E+
Sbjct: 217 DFGTCMKMDETGMVHCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLV 274
Query: 524 GRKP 527
G P
Sbjct: 275 GDTP 278
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 46/222 (20%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFI-AEVTTIGSLRHRNLVKLIGW-CY 384
+GKG +G V++G W+ + +AVK S SR K F E+ LRH N++ I
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFS--SRDEKSWFRETELYNTVMLRHENILGFIASDMT 102
Query: 385 ERHD---FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH-- 439
RH L+ Y GSL ++ TL+ L ++ + L +LH
Sbjct: 103 SRHSSTQLWLITHYHEMGSLYDYLQL---------TTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 440 ---NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI-------A 489
+ + HRD+KS NI++ + D GLA + ST ++
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA------VMHSQSTNQLDVGNNPRV 207
Query: 490 GTPGYMAPESFLVGRATIE---------TDIYAFGVLILEVA 522
GT YMAPE V TI+ DI+AFG+++ EVA
Sbjct: 208 GTKRYMAPE---VLDETIQVDCFDSYKRVDIWAFGLVLWEVA 246
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 29/240 (12%)
Query: 321 FNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVTTIGSLR 372
++ +LG G F V K G+ + KR +++SR+G +++ EV+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N++ L + D +L+ E + G L F F E S E + K+ +++G
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQ--ILNGVY 128
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDS----EFNARLGDFGLARTIQENLKTHHSTKEI 488
YLH+ ++ H D+K NIML + ++ DFGLA I + K I
Sbjct: 129 ----YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNI 177
Query: 489 AGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWE 546
GTP ++APE +E D+++ GV+ + G P G+ ++ N S V++ +E
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 323 PKNKL------GKGGFGTVYK----GIWRNKE---IAVKRVSETSRQGKQE-FIAEVTTI 368
P+N+L G G FG V + G+ ++ +AVK + ++ ++E ++E+ +
Sbjct: 37 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 96
Query: 369 GSL-RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI-----FYDETNSGPG-----EV 417
L H N+V L+G C L++ EY G L F+ + + + P E+
Sbjct: 97 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 156
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
L+ E LS + ++ + +L + K +HRD+ + NI+L ++ DFGLAR I+
Sbjct: 157 ALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 213
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILE---VACGRKPGNQSEQ 533
+ +++ K A P +MAPES T E+D++++G+ + E + PG +
Sbjct: 214 D--SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 271
Query: 534 NSYNNSIVHWLWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKT 593
Y +++ L E + EM ++ C +P RP+ K
Sbjct: 272 KFY---------------KMIKEGFRMLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQ 313
Query: 594 VLQVLSGE 601
++Q++ +
Sbjct: 314 IVQLIEKQ 321
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 29/240 (12%)
Query: 321 FNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVTTIGSLR 372
++ +LG G F V K G+ + KR +++SR+G +++ EV+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N++ L + D +L+ E + G L F F E S E + K+ +++G
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQ--ILNGVY 128
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIML-DSEF---NARLGDFGLARTIQENLKTHHSTKEI 488
YLH+ ++ H D+K NIML D ++ DFGLA I + K I
Sbjct: 129 ----YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNI 177
Query: 489 AGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWE 546
GTP ++APE +E D+++ GV+ + G P G+ ++ N S V++ +E
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 46/222 (20%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFI-AEVTTIGSLRHRNLVKLIGW-CY 384
+GKG +G V++G W+ + +AVK S SR K F E+ LRH N++ I
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFS--SRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 385 ERH---DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH-- 439
RH L+ Y GSL ++ TL+ L ++ + L +LH
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQL---------TTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 440 ---NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI-------A 489
+ + HRD+KS NI++ + D GLA + ST ++
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA------VMHSQSTNQLDVGNNPRV 178
Query: 490 GTPGYMAPESFLVGRATIE---------TDIYAFGVLILEVA 522
GT YMAPE V TI+ DI+AFG+++ EVA
Sbjct: 179 GTKRYMAPE---VLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 318 TGNFNPKNKLGKGGFGTVYK--GIWRNKEIAVKRVS--ETSRQGKQEFIAEVTTIGSLRH 373
T + +LGKG F V + I +E A K ++ + S + Q+ E L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIH 429
N+V+L E LV++ + G L + I +Y E ++ H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---------------H 107
Query: 430 GTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTK 486
Q L+ +++ ++HRD+K N++L S+ +L DFGLA +Q + +
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG-- 165
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSI 540
AGTPGY++PE D++A GV++ + G P +Q+ I
Sbjct: 166 -FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI 218
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 46/222 (20%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFI-AEVTTIGSLRHRNLVKLIGW-CY 384
+GKG +G V++G W+ + +AVK S SR K F E+ LRH N++ I
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFS--SRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 385 ERH---DFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH-- 439
RH L+ Y GSL ++ TL+ L ++ + L +LH
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYL---------QLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 440 ---NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI-------A 489
+ + HRD+KS NI++ + D GLA + ST ++
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA------VMHSQSTNQLDVGNNPRV 178
Query: 490 GTPGYMAPESFLVGRATIE---------TDIYAFGVLILEVA 522
GT YMAPE V TI+ DI+AFG+++ EVA
Sbjct: 179 GTKRYMAPE---VLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 29/240 (12%)
Query: 321 FNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVTTIGSLR 372
++ +LG G F V K G+ + KR +++SR+G +++ EV+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N++ L + D +L+ E + G L F+ E+ L E+ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--------LTEEEATEFLKQIL 124
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDS----EFNARLGDFGLARTIQENLKTHHSTKEI 488
+ YLH+ ++ H D+K NIML + ++ DFGLA I + K I
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEFKNI 177
Query: 489 AGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWE 546
GTP ++APE +E D+++ GV+ + G P G+ ++ N S V++ +E
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 29/240 (12%)
Query: 321 FNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVTTIGSLR 372
++ +LG G F V K G+ + KR +++SR+G +++ EV+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N++ L + D +L+ E + G L F+ E+ L E+ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--------LTEEEATEFLKQIL 124
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDS----EFNARLGDFGLARTIQENLKTHHSTKEI 488
+ YLH+ ++ H D+K NIML + ++ DFGLA I + K I
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEFKNI 177
Query: 489 AGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWE 546
GTP ++APE +E D+++ GV+ + G P G+ ++ N S V++ +E
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 136/308 (44%), Gaps = 52/308 (16%)
Query: 323 PKNKL------GKGGFGTVYK----GIWRNKE---IAVKRVSETSRQGKQE-FIAEVTTI 368
P+N+L G G FG V + G+ ++ +AVK + ++ ++E ++E+ +
Sbjct: 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 80
Query: 369 GSL-RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI-----FYDETNSGPGEVTLNWE 422
L H N+V L+G C L++ EY G L F+ + + + P + +
Sbjct: 81 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 423 KRL-----SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
S + ++ + +L + K +HRD+ + NI+L ++ DFGLAR I+
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 197
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILE---VACGRKPGNQSEQ 533
+ +++ K A P +MAPES T E+D++++G+ + E + PG +
Sbjct: 198 D--SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255
Query: 534 NSYNNSIVHWLWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKT 593
Y +++ L E + EM ++ C +P RP+ K
Sbjct: 256 KFY---------------KMIKEGFRMLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQ 297
Query: 594 VLQVLSGE 601
++Q++ +
Sbjct: 298 IVQLIEKQ 305
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 323 PKNKL------GKGGFGTVYK----GIWRNKE---IAVKRVSETSRQGKQE-FIAEVTTI 368
P+N+L G G FG V + G+ ++ +AVK + ++ ++E ++E+ +
Sbjct: 39 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 98
Query: 369 GSL-RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI-----FYDETNSGPG-----EV 417
L H N+V L+G C L++ EY G L F+ + + + P E+
Sbjct: 99 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 158
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
L+ E LS + ++ + +L + K +HRD+ + NI+L ++ DFGLAR I+
Sbjct: 159 ALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 215
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILE---VACGRKPGNQSEQ 533
+ +++ K A P +MAPES T E+D++++G+ + E + PG +
Sbjct: 216 D--SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 273
Query: 534 NSYNNSIVHWLWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKT 593
Y +++ L E + EM ++ C +P RP+ K
Sbjct: 274 KFY---------------KMIKEGFRMLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQ 315
Query: 594 VLQVLSGE 601
++Q++ +
Sbjct: 316 IVQLIEKQ 323
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 29/240 (12%)
Query: 321 FNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVTTIGSLR 372
++ +LG G F V K G+ + KR +++SR+G +++ EV+ + ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N++ L + D +L+ E + G L F+ E+ L E+ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--------LTEEEATEFLKQIL 124
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDS----EFNARLGDFGLARTIQENLKTHHSTKEI 488
+ YLH+ ++ H D+K NIML + ++ DFGLA I + K I
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEFKNI 177
Query: 489 AGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWE 546
GTP ++APE +E D+++ GV+ + G P G+ ++ N S V++ +E
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 323 PKNKL------GKGGFGTVYK----GIWRNKE---IAVKRVSETSRQGKQE-FIAEVTTI 368
P+N+L G G FG V + G+ ++ +AVK + ++ ++E ++E+ +
Sbjct: 44 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 103
Query: 369 GSL-RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI-----FYDETNSGPG-----EV 417
L H N+V L+G C L++ EY G L F+ + + + P E+
Sbjct: 104 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
L+ E LS + ++ + +L + K +HRD+ + NI+L ++ DFGLAR I+
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 220
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILE---VACGRKPGNQSEQ 533
+ +++ K A P +MAPES T E+D++++G+ + E + PG +
Sbjct: 221 D--SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
Query: 534 NSYNNSIVHWLWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKT 593
Y +++ L E + EM ++ C +P RP+ K
Sbjct: 279 KFY---------------KMIKEGFRMLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQ 320
Query: 594 VLQVLSGE 601
++Q++ +
Sbjct: 321 IVQLIEKQ 328
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 29/240 (12%)
Query: 321 FNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVTTIGSLR 372
++ +LG G F V K G+ + KR +++SR+G +++ EV+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N++ L + D +L+ E + G L F F E S E + K+ +++G
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQ--ILNGVY 128
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIML-DSEF---NARLGDFGLARTIQENLKTHHSTKEI 488
YLH+ ++ H D+K NIML D ++ DFGLA I + K I
Sbjct: 129 ----YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNI 177
Query: 489 AGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWE 546
GTP ++APE +E D+++ GV+ + G P G+ ++ N S V++ +E
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 29/240 (12%)
Query: 321 FNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVTTIGSLR 372
++ +LG G F V K G+ + KR +++SR+G +++ EV+ + ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N++ L + D +L+ E + G L F+ E+ L E+ +
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--------LTEEEATEFLKQIL 123
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDS----EFNARLGDFGLARTIQENLKTHHSTKEI 488
+ YLH+ ++ H D+K NIML + ++ DFGLA I + K I
Sbjct: 124 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEFKNI 176
Query: 489 AGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWE 546
GTP ++APE +E D+++ GV+ + G P G+ ++ N S V++ +E
Sbjct: 177 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 236
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 29/240 (12%)
Query: 321 FNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVTTIGSLR 372
++ +LG G F V K G+ + KR +++SR+G +++ EV+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N++ L + D +L+ E + G L F+ E+ L E+ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--------LTEEEATEFLKQIL 124
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDS----EFNARLGDFGLARTIQENLKTHHSTKEI 488
+ YLH+ ++ H D+K NIML + ++ DFGLA I + K I
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEFKNI 177
Query: 489 AGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWE 546
GTP ++APE +E D+++ GV+ + G P G+ ++ N S V++ +E
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 29/240 (12%)
Query: 321 FNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVTTIGSLR 372
++ +LG G F V K G+ + KR +++SR+G +++ EV+ + ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N++ L + D +L+ E + G L F+ E+ L E+ +
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--------LTEEEATEFLKQIL 123
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDS----EFNARLGDFGLARTIQENLKTHHSTKEI 488
+ YLH+ ++ H D+K NIML + ++ DFGLA I + K I
Sbjct: 124 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEFKNI 176
Query: 489 AGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWE 546
GTP ++APE +E D+++ GV+ + G P G+ ++ N S V++ +E
Sbjct: 177 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 236
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 327 LGKGGFGT--VYKGIWRNKEIAVKRVSETS--RQGKQEFIA-EVTTIGSLRHRNLVKLIG 381
LG+G F T + + + ++E A+K + + ++ K ++ E + L H VKL
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 382 WCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ Y NG L K+I +DET + R S AL+Y
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-----------RFYTAEIVS-ALEY 145
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
LH K ++HRD+K NI+L+ + + ++ DFG A+ + K + GT Y++P
Sbjct: 146 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX-FVGTAQYVSP 201
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLW-----------E 546
E A +D++A G +I ++ G P + I+ + +
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 261
Query: 547 LRRKGRILDAADSRLGGEFSEKEME 571
L K +LDA RLG E EME
Sbjct: 262 LVEKLLVLDAT-KRLGCE----EME 281
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 29/240 (12%)
Query: 321 FNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVTTIGSLR 372
++ +LG G F V K G+ + KR +++SR+G +++ EV+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N++ L + D +L+ E + G L F+ E+ L E+ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--------LTEEEATEFLKQIL 124
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDS----EFNARLGDFGLARTIQENLKTHHSTKEI 488
+ YLH+ ++ H D+K NIML + ++ DFGLA I + K I
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNI 177
Query: 489 AGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWE 546
GTP ++APE +E D+++ GV+ + G P G+ ++ N S V++ +E
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 108/212 (50%), Gaps = 22/212 (10%)
Query: 327 LGKGGFGTVYK----GIWRN---KEIAVKRVSETSRQGKQE-FIAEVTTIGSL-RHRNLV 377
LG+G FG V + GI + + +AVK + E + + ++E+ + + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 378 KLIGWCYERHDFLLV-YEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIH------G 430
L+G C + L+V E+ G+L ++ P + ++ L++ H
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAG 490
++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++ K A
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD--PDXVRKGDAR 211
Query: 491 TP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 29/240 (12%)
Query: 321 FNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVTTIGSLR 372
++ +LG G F V K G+ + KR +++SR+G +++ EV+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N++ L + D +L+ E + G L F+ E+ L E+ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--------LTEEEATEFLKQIL 124
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIML-DSEF---NARLGDFGLARTIQENLKTHHSTKEI 488
+ YLH+ ++ H D+K NIML D ++ DFGLA I + K I
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNI 177
Query: 489 AGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWE 546
GTP ++APE +E D+++ GV+ + G P G+ ++ N S V++ +E
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 140/308 (45%), Gaps = 52/308 (16%)
Query: 323 PKNKL------GKGGFGTVYK----GIWRNKE---IAVKRVSETSRQGKQE-FIAEVTTI 368
P+N+L G G FG V + G+ ++ +AVK + ++ ++E ++E+ +
Sbjct: 44 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 103
Query: 369 GSL-RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI-----FYDETNSGPG-----EV 417
L H N+V L+G C L++ EY G L F+ + + + P E+
Sbjct: 104 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 418 TLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQE 477
L+ E LS + ++ + +L + K +HRD+ + NI+L ++ DFGLAR I+
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKN 220
Query: 478 NLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILE---VACGRKPGNQSEQ 533
+ +++ K A P +MAPES T E+D++++G+ + E + PG +
Sbjct: 221 D--SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
Query: 534 NSYNNSIVHWLWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKT 593
Y +++ L E + EM ++ C +P RP+ K
Sbjct: 279 KFY---------------KMIKEGFRMLSPEHAPAEMYDIM---KTCWDADPLKRPTFKQ 320
Query: 594 VLQVLSGE 601
++Q++ +
Sbjct: 321 IVQLIEKQ 328
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 29/240 (12%)
Query: 321 FNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVTTIGSLR 372
++ +LG G F V K G+ + KR +++SR+G +++ EV+ + ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N++ L + D +L+ E + G L F+ E+ L E+ +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--------LTEEEATEFLKQIL 124
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDS----EFNARLGDFGLARTIQENLKTHHSTKEI 488
+ YLH+ ++ H D+K NIML + ++ DFGLA I + K I
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEFKNI 177
Query: 489 AGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWE 546
GTP ++APE +E D+++ GV+ + G P G+ ++ N S V++ +E
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 326 KLGKGGFGTVYKGIWRNKE----IAVKRVSETSRQGKQEFIA--EVTTIGSLRHRNLVKL 379
K+G+G +G V+K RN++ +A+K+ E+ + IA E+ + L+H NLV L
Sbjct: 10 KIGEGSYGVVFKC--RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNL 67
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
+ + LV+EY + L + Y ++ W+ T QA+++ H
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVNFCH 119
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
+ +HRD+K NI++ +L DFG AR + + + E+A T Y +PE
Sbjct: 120 KHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTG--PSDYYDDEVA-TRWYRSPE- 172
Query: 500 FLVGRATI--ETDIYAFGVLILEVACG 524
LVG D++A G + E+ G
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 318 TGNFNPKNKLGKGGFGTVYK--GIWRNKEIAVKRVS--ETSRQGKQEFIAEVTTIGSLRH 373
T + +LGKG F V + I +E A K ++ + S + Q+ E L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIH 429
N+V+L E LV++ + G L + I +Y E ++ H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---------------H 107
Query: 430 GTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTK 486
Q L+ +++ ++HRD+K N++L S+ +L DFGLA +Q + +
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG-- 165
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSI 540
AGTPGY++PE D++A GV++ + G P +Q+ I
Sbjct: 166 -FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI 218
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 45/279 (16%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 7 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 62
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 63 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 120
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 121 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 171
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 172 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 226
Query: 526 KPGNQSEQ------------NSYNNSIVHWLWELRRKGR 552
P E+ +S ++ W LR R
Sbjct: 227 IPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 265
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 108/248 (43%), Gaps = 33/248 (13%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 7 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 62
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 63 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 120
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 121 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 171
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 172 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 226
Query: 526 KPGNQSEQ 533
P E+
Sbjct: 227 IPFEHDEE 234
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 45/279 (16%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 8 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 63
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 64 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 121
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 122 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 172
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 173 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 227
Query: 526 KPGNQSEQ------------NSYNNSIVHWLWELRRKGR 552
P E+ +S ++ W LR R
Sbjct: 228 IPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 266
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 108/247 (43%), Gaps = 31/247 (12%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 8 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 63
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 64 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 121
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 122 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 172
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRK 526
DFG +++ + T + P ++ + GR+ +++ G+L+ ++ CG
Sbjct: 173 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYH-GRSAA---VWSLGILLYDMVCGDI 228
Query: 527 PGNQSEQ 533
P E+
Sbjct: 229 PFEHDEE 235
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 45/279 (16%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 21 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 76
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 77 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 134
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 135 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 185
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 186 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 240
Query: 526 KPGNQSEQ------------NSYNNSIVHWLWELRRKGR 552
P E+ +S ++ W LR R
Sbjct: 241 IPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSDR 279
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 45/279 (16%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 20 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 75
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 76 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 133
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 134 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 184
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 185 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 239
Query: 526 KPGNQSEQ------------NSYNNSIVHWLWELRRKGR 552
P E+ +S ++ W LR R
Sbjct: 240 IPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSDR 278
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 45/279 (16%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 21 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 76
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 77 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 134
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 135 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 185
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 186 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 240
Query: 526 KPGNQSEQ------------NSYNNSIVHWLWELRRKGR 552
P E+ +S ++ W LR R
Sbjct: 241 IPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSDR 279
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 29/228 (12%)
Query: 310 RLKELKKATGNFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGKQEFIA-EVT 366
R K+ + ++ ++ LG G F V + K +A+K +++ + +GK+ + E+
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 367 TIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSL-DKFI---FYDETNSGPGEVTLNWE 422
+ ++H N+V L L+ + + G L D+ + FY E ++
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--------- 119
Query: 423 KRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIM---LDSEFNARLGDFGLARTIQENL 479
+I A+ YLH+ ++HRD+K N++ LD + + DFGL++ E+
Sbjct: 120 ---RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDP 171
Query: 480 KTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ ST GTPGY+APE + D ++ GV+ + CG P
Sbjct: 172 GSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 108/247 (43%), Gaps = 31/247 (12%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 8 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 63
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 64 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 121
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 122 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 172
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRK 526
DFG +++ + T + P ++ + GR+ +++ G+L+ ++ CG
Sbjct: 173 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYH-GRSAA---VWSLGILLYDMVCGDI 228
Query: 527 PGNQSEQ 533
P E+
Sbjct: 229 PFEHDEE 235
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 108/248 (43%), Gaps = 33/248 (13%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 21 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 76
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 77 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 134
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 135 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 185
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 186 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 240
Query: 526 KPGNQSEQ 533
P E+
Sbjct: 241 IPFEHDEE 248
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 45/279 (16%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 20 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 75
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 76 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 133
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 134 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 184
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 185 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 239
Query: 526 KPGNQSEQ------------NSYNNSIVHWLWELRRKGR 552
P E+ +S ++ W LR R
Sbjct: 240 IPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 278
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 45/279 (16%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 20 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 75
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 76 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 133
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 134 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 184
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 185 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 239
Query: 526 KPGNQSEQ------------NSYNNSIVHWLWELRRKGR 552
P E+ +S ++ W LR R
Sbjct: 240 IPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSDR 278
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 29/240 (12%)
Query: 321 FNPKNKLGKGGFGTVYK------GIWRNKEIAVKRVSETSRQG--KQEFIAEVTTIGSLR 372
++ +LG G F V K G+ + KR +++SR+G +++ EV+ + ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
H N++ L + D +L+ E + G L F+ E+ L E+ +
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES--------LTEEEATEFLKQIL 124
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDS----EFNARLGDFGLARTIQENLKTHHSTKEI 488
+ YLH+ ++ H D+K NIML + ++ DFGLA I + K I
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG----NEFKNI 177
Query: 489 AGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP--GNQSEQNSYNNSIVHWLWE 546
GTP ++APE +E D+++ GV+ + G P G+ ++ N S V++ +E
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 108/248 (43%), Gaps = 33/248 (13%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 20 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 75
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 76 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 133
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 134 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 184
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 185 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 239
Query: 526 KPGNQSEQ 533
P E+
Sbjct: 240 IPFEHDEE 247
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLV 377
+++ +LG G FG V++ R A K V K+ E+ T+ LRH LV
Sbjct: 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLV 217
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
L + ++ +++YE+M G L + + DE N ++ ++ + + + L +
Sbjct: 218 NLHDAFEDDNEMVMIYEFMSGGELFEKVA-DEHNK------MSEDEAVEYMRQVCKGLCH 270
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFN--ARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
+H E +H D+K NIM ++ + +L DFGL +L S K GT +
Sbjct: 271 MH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLT----AHLDPKQSVKVTTGTAEFA 323
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKP-GNQSEQNSYNN 538
APE TD+++ GVL + G P G +++ + N
Sbjct: 324 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRN 367
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 45/279 (16%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 27 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 82
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 83 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 140
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 141 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 191
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 192 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 246
Query: 526 KPGNQSEQ------------NSYNNSIVHWLWELRRKGR 552
P E+ +S ++ W LR R
Sbjct: 247 IPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 108/248 (43%), Gaps = 33/248 (13%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 21 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 76
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 77 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 134
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 135 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 185
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 186 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 240
Query: 526 KPGNQSEQ 533
P E+
Sbjct: 241 IPFEHDEE 248
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 108/248 (43%), Gaps = 33/248 (13%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 35 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 90
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 91 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 148
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 149 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 199
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 200 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 254
Query: 526 KPGNQSEQ 533
P E+
Sbjct: 255 IPFEHDEE 262
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 29/228 (12%)
Query: 310 RLKELKKATGNFNPKNKLGKGGFGTVY--KGIWRNKEIAVKRVSETSRQGKQEFIA-EVT 366
R K+ + ++ ++ LG G F V + K +A+K +++ + +GK+ + E+
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 367 TIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSL-DKFI---FYDETNSGPGEVTLNWE 422
+ ++H N+V L L+ + + G L D+ + FY E ++
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--------- 119
Query: 423 KRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIM---LDSEFNARLGDFGLARTIQENL 479
+I A+ YLH+ ++HRD+K N++ LD + + DFGL++ E+
Sbjct: 120 ---RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDP 171
Query: 480 KTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ ST GTPGY+APE + D ++ GV+ + CG P
Sbjct: 172 GSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 108/248 (43%), Gaps = 33/248 (13%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 40 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 95
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 96 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 153
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 154 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 204
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 205 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 259
Query: 526 KPGNQSEQ 533
P E+
Sbjct: 260 IPFEHDEE 267
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIA-EVTTIGSLRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I E+ L H N+VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 75 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 125
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 180
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 29/228 (12%)
Query: 310 RLKELKKATGNFNPKNKLGKGGFGTVY--KGIWRNKEIAVKRVSETSRQGKQEFIA-EVT 366
R K+ + ++ ++ LG G F V + K +A+K +++ + +GK+ + E+
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIA 68
Query: 367 TIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSL-DKFI---FYDETNSGPGEVTLNWE 422
+ ++H N+V L L+ + + G L D+ + FY E ++
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--------- 119
Query: 423 KRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIM---LDSEFNARLGDFGLARTIQENL 479
+I A+ YLH+ ++HRD+K N++ LD + + DFGL++ E+
Sbjct: 120 ---RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDP 171
Query: 480 KTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ ST GTPGY+APE + D ++ GV+ + CG P
Sbjct: 172 GSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 34/228 (14%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVK--RVSETSRQGKQEFIAEVTTIGS 370
AT + P ++G G +GTVYK R+ +A+K RV G I+ V +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 371 LR------HRNLVKLIGWCY-ERHD----FLLVYEYMPNGSLDKFIFYDETNSGPGEVTL 419
LR H N+V+L+ C R D LV+E++ + L ++ P E
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 123
Query: 420 NWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ ++ + LD+LH ++HRD+K NI++ S +L DFGLAR +
Sbjct: 124 DLMRQFL------RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM 174
Query: 480 KTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ + T Y APE L D+++ G + E+ RKP
Sbjct: 175 ----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKP 217
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLV 377
+++ +LG G FG V++ R A K V K+ E+ T+ LRH LV
Sbjct: 52 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLV 111
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
L + ++ +++YE+M G L + + DE N ++ ++ + + + L +
Sbjct: 112 NLHDAFEDDNEMVMIYEFMSGGELFEKVA-DEHNK------MSEDEAVEYMRQVCKGLCH 164
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFN--ARLGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
+H E +H D+K NIM ++ + +L DFGL +L S K GT +
Sbjct: 165 MH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLT----AHLDPKQSVKVTTGTAEFA 217
Query: 496 APESFLVGRATIETDIYAFGVLILEVACGRKP-GNQSEQNSYNN 538
APE TD+++ GVL + G P G +++ + N
Sbjct: 218 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRN 261
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 45/279 (16%)
Query: 299 INGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQ 356
++ T LAP K E + + LG GGFG+VY GI N +A+K V +
Sbjct: 35 LHATKLAPGK----EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS 90
Query: 357 GKQEFI------AEVTTIGSLRH--RNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFY 407
E EV + + +++L+ W +ER D F+L+ E P D F F
Sbjct: 91 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFI 148
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARL 466
E + L E S +A+ + HN VLHRDIK NI++D + +L
Sbjct: 149 TERGA------LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKL 199
Query: 467 GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
DFG +++ + T + GT Y PE R + +++ G+L+ ++ CG
Sbjct: 200 IDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 254
Query: 526 KPGNQSEQ------------NSYNNSIVHWLWELRRKGR 552
P E+ +S ++ W LR R
Sbjct: 255 IPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 293
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 29/228 (12%)
Query: 310 RLKELKKATGNFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGKQEFIA-EVT 366
R K+ + ++ ++ LG G F V + K +A+K +++ + +GK+ + E+
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 367 TIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSL-DKFI---FYDETNSGPGEVTLNWE 422
+ ++H N+V L L+ + + G L D+ + FY E ++
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--------- 119
Query: 423 KRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIM---LDSEFNARLGDFGLARTIQENL 479
+I A+ YLH+ ++HRD+K N++ LD + + DFGL++ E+
Sbjct: 120 ---RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDP 171
Query: 480 KTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ ST GTPGY+APE + D ++ GV+ + CG P
Sbjct: 172 GSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 327 LGKGGFGTVYKGIWRN--KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL----- 379
LG GG G V+ + + K +A+K++ T Q + + E+ I L H N+VK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 380 ---------IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHG 430
+G E + +V EYM + GP L RL ++
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETD------LANVLEQGP---LLEEHARL-FMYQ 128
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSE-FNARLGDFGLARTIQENLKTHHSTKEIA 489
+ L Y+H+ + VLHRD+K +N+ +++E ++GDFGLAR + + E
Sbjct: 129 LLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL 185
Query: 490 GTPGYMAPESFLV-GRATIETDIYAFGVLILEVACGR 525
T Y +P L T D++A G + E+ G+
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 28/227 (12%)
Query: 314 LKKATGNFNPKNKLGKGGFGTVYKGI-WRN--KEIAVKRVS-ETSRQGKQ-EFIAEVTTI 368
L +A + ++G+G +G V+K +N + +A+KRV +T +G I EV +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 369 GSLR---HRNLVKLIGWC-YERHD----FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLN 420
L H N+V+L C R D LV+E++ D + D+ PG T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPE-PGVPT-- 119
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
E ++ + LD+LH+ RV+HRD+K NI++ S +L DFGLAR +
Sbjct: 120 -ETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM- 174
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ + T Y APE L D+++ G + E+ RKP
Sbjct: 175 ---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP 217
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 37/216 (17%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER 386
LG+G FG V+ VK++S + +Q + +V +L+ R+ V+ ER
Sbjct: 32 LGQGSFGKVF---------LVKKISGSD--ARQLYAMKVLKKATLKVRDRVRT---KMER 77
Query: 387 -------HDFL--LVYEYMPNGSLDKFIFYDETNSG------PGEVTLNWEKRLSVIHGT 431
H F+ L Y + G L ++ D G EV E +
Sbjct: 78 DILVEVNHPFIVKLHYAFQTEGKL--YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGT 491
+ ALD+LH+ +++RD+K NI+LD E + +L DFGL++ ++ K +S GT
Sbjct: 136 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS---FCGT 189
Query: 492 PGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
YMAPE T D ++FGVL+ E+ G P
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 74 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 124
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 179
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 75 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 125
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 180
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 75 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 125
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 180
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 74 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 124
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 179
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 28/227 (12%)
Query: 314 LKKATGNFNPKNKLGKGGFGTVYKGI-WRN--KEIAVKRVS-ETSRQGKQ-EFIAEVTTI 368
L +A + ++G+G +G V+K +N + +A+KRV +T +G I EV +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 369 GSLR---HRNLVKLIGWC-YERHD----FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLN 420
L H N+V+L C R D LV+E++ D + D+ PG T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPE-PGVPT-- 119
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
E ++ + LD+LH+ RV+HRD+K NI++ S +L DFGLAR +
Sbjct: 120 -ETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM- 174
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ + T Y APE L D+++ G + E+ RKP
Sbjct: 175 ---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP 217
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 37/216 (17%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER 386
LG+G FG V+ VK++S + +Q + +V +L+ R+ V+ ER
Sbjct: 33 LGQGSFGKVF---------LVKKISGSD--ARQLYAMKVLKKATLKVRDRVRT---KMER 78
Query: 387 -------HDFL--LVYEYMPNGSLDKFIFYDETNSG------PGEVTLNWEKRLSVIHGT 431
H F+ L Y + G L ++ D G EV E +
Sbjct: 79 DILVEVNHPFIVKLHYAFQTEGKL--YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 136
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGT 491
+ ALD+LH+ +++RD+K NI+LD E + +L DFGL++ ++ K +S GT
Sbjct: 137 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS---FCGT 190
Query: 492 PGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
YMAPE T D ++FGVL+ E+ G P
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 74 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 124
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 179
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 74 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 124
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 179
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 73 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 123
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 124 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 178
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 28/227 (12%)
Query: 314 LKKATGNFNPKNKLGKGGFGTVYKGI-WRN--KEIAVKRVS-ETSRQGKQ-EFIAEVTTI 368
L +A + ++G+G +G V+K +N + +A+KRV +T +G I EV +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 369 GSLR---HRNLVKLIGWC-YERHD----FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLN 420
L H N+V+L C R D LV+E++ D + D+ PG T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPE-PGVPT-- 119
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
E ++ + LD+LH+ RV+HRD+K NI++ S +L DFGLAR +
Sbjct: 120 -ETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM- 174
Query: 481 THHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ + T Y APE L D+++ G + E+ RKP
Sbjct: 175 ---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP 217
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 37/216 (17%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYER 386
LG+G FG V+ VK++S + +Q + +V +L+ R+ V+ ER
Sbjct: 32 LGQGSFGKVF---------LVKKISGSD--ARQLYAMKVLKKATLKVRDRVRT---KMER 77
Query: 387 -------HDFL--LVYEYMPNGSLDKFIFYDETNSG------PGEVTLNWEKRLSVIHGT 431
H F+ L Y + G L ++ D G EV E +
Sbjct: 78 DILVEVNHPFIVKLHYAFQTEGKL--YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGT 491
+ ALD+LH+ +++RD+K NI+LD E + +L DFGL++ ++ K +S GT
Sbjct: 136 ALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS---FCGT 189
Query: 492 PGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
YMAPE T D ++FGVL+ E+ G P
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 74 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 124
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 179
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 75 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 125
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 180
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 326 KLGKGGFGTVYKGIWRNKE----IAVKRV--SETSRQGKQEFIAEVTTIGSLRHRNLVKL 379
K+G+G +GTV+K +N+E +A+KRV + + E+ + L+H+N+V+L
Sbjct: 9 KIGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
+ LV+E+ + L K+ +D N L+ E S + + L + H
Sbjct: 67 HDVLHSDKKLTLVFEFC-DQDLKKY--FDSCNGD-----LDPEIVKSFLFQLLKGLGFCH 118
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
+ + VLHRD+K N++++ +L +FGLAR ++ + + E+ + P
Sbjct: 119 S---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY--SAEVVTL--WYRPPD 171
Query: 500 FLVGRATIET--DIYAFGVLILEVA-CGRK--PGN 529
L G T D+++ G + E+A GR PGN
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN 206
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 75 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 125
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 180
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 75 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 125
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 180
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 74 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 124
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAPE--LLK 179
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 75 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 125
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 180
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 74 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 124
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 179
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 74 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 124
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 179
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 74 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 124
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAPE--LLK 179
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 75 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 125
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAPE--LLK 180
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEF-IAEVTTIGSLR--- 372
AT + P ++G G +GTVYK + V S G++ I+ V + LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 373 ---HRNLVKLIGWCY-ERHD----FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKR 424
H N+V+L+ C R D LV+E++ D + D+ PG L E
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPP-PG---LPAETI 114
Query: 425 LSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHS 484
++ + LD+LH ++HRD+K NI++ S +L DFGLAR + +
Sbjct: 115 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM----A 167
Query: 485 TKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ T Y APE L D+++ G + E+ RKP
Sbjct: 168 LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKP 209
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 46/286 (16%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNKE----IAVKRVSETSRQGKQEFIAEVTTIGSL---- 371
+F ++LG G +G V+K R+KE AVKR S + +G ++ ++ +GS
Sbjct: 58 SFQRLSRLGHGSYGEVFK--VRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVG 114
Query: 372 RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGT 431
+H V+L +E L + + SL + + +V W + T
Sbjct: 115 QHPCCVRLE-QAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQV---W----GYLRDT 166
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGT 491
AL +LH+ + ++H D+K +NI L +LGDFGL L T + + G
Sbjct: 167 LLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLV----ELGTAGAGEVQEGD 219
Query: 492 PGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELRRKG 551
P YMAPE L G D+++ G+ ILEVAC + + E W+ R+G
Sbjct: 220 PRYMAPE-LLQGSYGTAADVFSLGLTILEVACNMELPHGGEG-----------WQQLRQG 267
Query: 552 RILDAADSRLGGEFSEKEMECVLILGLACCHPNPHLRPSMKTVLQV 597
+ + L E+ VL++ L P+P LR + + +L +
Sbjct: 268 YLPPEFTAGL-----SSELRSVLVMML---EPDPKLRATAEALLAL 305
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 74 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 124
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAPE--LLK 179
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEF-IAEVTTIGSLR--- 372
AT + P ++G G +GTVYK + V S G++ I+ V + LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 373 ---HRNLVKLIGWCY-ERHD----FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKR 424
H N+V+L+ C R D LV+E++ D + D+ PG L E
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPP-PG---LPAETI 114
Query: 425 LSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHS 484
++ + LD+LH ++HRD+K NI++ S +L DFGLAR + +
Sbjct: 115 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM----A 167
Query: 485 TKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ T Y APE L D+++ G + E+ RKP
Sbjct: 168 LAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKP 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G +G V + R E +AVK V E I + I L H N+VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 74 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 124
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MXGTLPYVAPE--LLK 179
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3U4X|A Chain A, Crystal Structure Of A Lectin From Camptosema Pedicellatum
Seeds In Complex With
5-Bromo-4-Chloro-3-Indolyl-Alpha-D-Mannose
Length = 236
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 26 SLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVTYDVRGAPITNQSGRAIYKDQFQLWRDN 84
SLHF F F++ ++ L D ST + +Q+T G+P +N GRA+Y +W D
Sbjct: 125 SLHFTFNQFSQSPKDLILQGDASTDSDGNLQLTRVSNGSPQSNSVGRALYYAPVHVW-DK 183
Query: 85 KNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
V A+F TF I + + P +G+AF IA + +P S G+ LG+
Sbjct: 184 SAVVASFDATFTFLIKSPDSDPADGIAFFIANTDSSIPHGSGGRLLGL 231
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 144 IVAIEFDTKKSYE-QDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYD--GQN 200
IVA+E DT + + D N H+G+++ S IR TR N+ +G + Y+ +
Sbjct: 4 IVAVELDTYPNTDIGDPNYQHIGINIKS---IRSKATTRWNVQDGKVGTAHISYNSVAKR 60
Query: 201 ITVFVA--NMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
++ V+ + +S +DL+ LPE V VG SASTG + N + SW+F
Sbjct: 61 LSAIVSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGVYKETNTILSWSF 111
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 30/246 (12%)
Query: 293 DDIEGLINGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVK 348
+D EG++ L P + E ++ + +LG+G FG V++ ++K+ AVK
Sbjct: 49 EDNEGVLLTEKLKPVDY---EYREEVHWMTHQPRLGRGSFGEVHR--MKDKQTGFQCAVK 103
Query: 349 RVS-ETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFY 407
+V E R + E+ L +V L G E + E + GSL + I
Sbjct: 104 KVRLEVFR------VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-- 155
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN-ARL 466
G L ++ L + + L+YLH +R+LH D+K+ N++L S+ + A L
Sbjct: 156 --KQMG----CLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAAL 206
Query: 467 GDFGLARTIQEN--LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACG 524
DFG A +Q + K+ + I GT +MAPE + + DI++ ++L + G
Sbjct: 207 CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
Query: 525 RKPGNQ 530
P Q
Sbjct: 267 CHPWTQ 272
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 327 LGKGGFGTVY--KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
LG G F V+ K K A+K + ++ E+ + ++H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS-VIHGTSQALDYLHNGSE 443
+ LV + + G L I E + EK S VI A+ YLH E
Sbjct: 77 STTHYYLVMQLVSGGELFDRIL---------ERGVYTEKDASLVIQQVLSAVKYLH---E 124
Query: 444 KRVLHRDIKSSNIM-LDSEFNARL--GDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
++HRD+K N++ L E N+++ DFGL++ Q + + GTPGY+APE
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS-----TACGTPGYVAPEVL 179
Query: 501 LVGRATIETDIYAFGVLILEVACGRKP 527
+ D ++ GV+ + CG P
Sbjct: 180 AQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 27/235 (11%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQGKQEF------I 362
+KE + + LG GGFG+VY GI N +A+K V + E
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 363 AEVTTIGSLR--HRNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFYDETNSGPGEVTL 419
EV + + +++L+ W +ER D F+L+ E P D F F E + L
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFITERGA------L 112
Query: 420 NWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARLGDFGLARTIQEN 478
E S +A+ + HN VLHRDIK NI++D + +L DFG +++
Sbjct: 113 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQ 533
+ T + P ++ + GR+ +++ G+L+ ++ CG P E+
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYH-GRSAA---VWSLGILLYDMVCGDIPFEHDEE 220
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 35/247 (14%)
Query: 306 PKKFRLKELKKATGNFNPK----NKLGKGGFGTVYKGI--WRNKEIAVKRVS-------- 351
PK L+ L G ++ K + LG G FG V+ + +NKE+ VK +
Sbjct: 7 PKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDC 66
Query: 352 --ETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDE 409
E + GK E+ + + H N++K++ + F LV E +G LD F F D
Sbjct: 67 WIEDPKLGK--VTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDR 123
Query: 410 TNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDF 469
L+ + A+ YL K ++HRDIK NI++ +F +L DF
Sbjct: 124 HPR------LDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDF 174
Query: 470 GLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRAT--IETDIYAFGVLILEVACGRKP 527
G A ++ K ++ GT Y APE L+G E ++++ GV + + P
Sbjct: 175 GSAAYLERG-KLFYT---FCGTIEYCAPE-VLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
Query: 528 GNQSEQN 534
+ E+
Sbjct: 230 FCELEET 236
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 27/235 (11%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQGKQEF------I 362
+KE + + LG GGFG+VY GI N +A+K V + E
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 363 AEVTTIGSLR--HRNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFYDETNSGPGEVTL 419
EV + + +++L+ W +ER D F+L+ E P D F F E + L
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFITERGA------L 112
Query: 420 NWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARLGDFGLARTIQEN 478
E S +A+ + HN VLHRDIK NI++D + +L DFG +++
Sbjct: 113 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQ 533
+ T + P ++ + GR+ +++ G+L+ ++ CG P E+
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYH-GRSAA---VWSLGILLYDMVCGDIPFEHDEE 220
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 27/235 (11%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQGKQEF------I 362
+KE + + LG GGFG+VY GI N +A+K V + E
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 363 AEVTTIGSLR--HRNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFYDETNSGPGEVTL 419
EV + + +++L+ W +ER D F+L+ E P D F F E + L
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFITERGA------L 112
Query: 420 NWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARLGDFGLARTIQEN 478
E S +A+ + HN VLHRDIK NI++D + +L DFG +++
Sbjct: 113 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQ 533
+ T + P ++ + GR+ +++ G+L+ ++ CG P E+
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYH-GRSAA---VWSLGILLYDMVCGDIPFEHDEE 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 327 LGKGGFGTVYKGIWRNKEI--AVKRVSETSRQGKQE---FIAEVTTI-GSLRHRNLVKLI 380
+GKG FG V + +E+ AVK + + + K+E ++E + +++H LV L
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL- 104
Query: 381 GWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
+ ++ D L V +Y+ G L FY L R S AL YLH
Sbjct: 105 HFSFQTADKLYFVLDYINGGEL----FYHLQRE---RCFLEPRARFYAAEIAS-ALGYLH 156
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
+ + +++RD+K NI+LDS+ + L DFGL + EN++ + +T GTP Y+APE
Sbjct: 157 SLN---IVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPEV 210
Query: 500 FLVGRATIETDIYAFGVLILEVACGRKP 527
D + G ++ E+ G P
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 327 LGKGGFGTVYK-----GIWRNKEIAVKRVSETS--RQGKQ--EFIAEVTTIGSLRHRNLV 377
LGKGG+G V++ G K A+K + + R K AE + ++H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 378 KLIGWCYERHDFLLVYEYMPNGSL-----DKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
LI L+ EY+ G L + IF ++T + S
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTAC-------------FYLAEIS 131
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR-TIQENLKTHHSTKEIAGT 491
AL +LH +K +++RD+K NIML+ + + +L DFGL + +I + TH GT
Sbjct: 132 MALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH----TFCGT 184
Query: 492 PGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
YMAPE + D ++ G L+ ++ G P
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 327 LGKGGFGTVYK-----GIWRNKEIAVKRVSETS--RQGKQ--EFIAEVTTIGSLRHRNLV 377
LGKGG+G V++ G K A+K + + R K AE + ++H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 378 KLIGWCYERHDFLLVYEYMPNGSL-----DKFIFYDETNSGPGEVTLNWEKRLSVIHGTS 432
LI L+ EY+ G L + IF ++T + S
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTAC-------------FYLAEIS 131
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR-TIQENLKTHHSTKEIAGT 491
AL +LH +K +++RD+K NIML+ + + +L DFGL + +I + TH GT
Sbjct: 132 MALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH----XFCGT 184
Query: 492 PGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
YMAPE + D ++ G L+ ++ G P
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 31/257 (12%)
Query: 284 RRYRARELD---DDIEGLINGTNLAPKKFRLKE-LKKATGNFNPKNKLGKGGFGTVYKGI 339
R R+RE +D EG++ L P + +E + AT +LG+G FG V++
Sbjct: 58 RGSRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQL----RLGRGSFGEVHRME 113
Query: 340 WRNK--EIAVKRVS-ETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYM 396
+ + AVK+V E R E+ L +V L G E + E +
Sbjct: 114 DKQTGFQCAVKKVRLEVFR------AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELL 167
Query: 397 PNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNI 456
GSL + + + L ++ L + + L+YLH+ +R+LH D+K+ N+
Sbjct: 168 EGGSLGQLVKE--------QGCLPEDRALYYLGQALEGLEYLHS---RRILHGDVKADNV 216
Query: 457 MLDSE-FNARLGDFGLARTIQEN--LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYA 513
+L S+ +A L DFG A +Q + K+ + I GT +MAPE L + D+++
Sbjct: 217 LLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWS 276
Query: 514 FGVLILEVACGRKPGNQ 530
++L + G P Q
Sbjct: 277 SCCMMLHMLNGCHPWTQ 293
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFI-AEVTTIGSLRHRNLVKLIGWCYE 385
+GKG +G V++G+W + +AVK S SR + F E+ LRH N++ I
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFS--SRDEQSWFRETEIYNTVLLRHDNILGFIASDMT 73
Query: 386 RHD----FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH-- 439
+ L+ Y +GSL F+ TL L + + L +LH
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFL---------QRQTLEPHLALRLAVSAACGLAHLHVE 124
Query: 440 ---NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN---LKTHHSTKEIAGTPG 493
+ + HRD KS N+++ S + D GLA + L ++ + GT
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR--VGTKR 182
Query: 494 YMAPESF--LVGRATIE----TDIYAFGVLILEVA 522
YMAPE + E TDI+AFG+++ E+A
Sbjct: 183 YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 317 ATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEF-IAEVTTIGSLR--- 372
AT + P ++G G +GTVYK + V S G++ I+ V + LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 373 ---HRNLVKLIGWCY-ERHD----FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKR 424
H N+V+L+ C R D LV+E++ D + D+ PG L E
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPP-PG---LPAETI 114
Query: 425 LSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHS 484
++ + LD+LH ++HRD+K NI++ S +L DFGLAR + +
Sbjct: 115 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM----A 167
Query: 485 TKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ T Y APE L D+++ G + E+ RKP
Sbjct: 168 LFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKP 209
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 29/236 (12%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQGKQEF------I 362
+KE + + LG GGFG+VY GI N +A+K V + E
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 363 AEVTTIGSLR--HRNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFYDETNSGPGEVTL 419
EV + + +++L+ W +ER D F+L+ E P D F F E + L
Sbjct: 83 MEVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFITERGA------L 134
Query: 420 NWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARLGDFGLARTIQEN 478
E S +A+ + HN VLHRDIK NI++D + +L DFG +++
Sbjct: 135 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 191
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRKPGNQSEQ 533
+ T + GT Y PE R + +++ G+L+ ++ CG P E+
Sbjct: 192 VYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 242
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 90/210 (42%), Gaps = 20/210 (9%)
Query: 327 LGKGGFGTVYKGIWRNKE--IAVKRVSETSRQGKQEFIAEVTTIGS-LRHRNLVKLIGWC 383
LG+G G V + R E +AVK V E I + I L H N+VK G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
E + L EY G L +D G + ++ H + YLH
Sbjct: 74 REGNIQYLFLEYCSGGEL-----FDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIG- 124
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ HRDIK N++LD N ++ DFGLA + N + K + GT Y+APE L+
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCGTLPYVAPE--LLK 179
Query: 504 RATIE---TDIYAFGVLILEVACGRKPGNQ 530
R D+++ G+++ + G P +Q
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 27/234 (11%)
Query: 312 KELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQGKQEFI------A 363
KE + + LG GGFG+VY GI N +A+K V + E
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 364 EVTTIGSLR--HRNLVKLIGWCYERHD-FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLN 420
EV + + +++L+ W +ER D F+L+ E P D F F E + L
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILE-RPEPVQDLFDFITERGA------LQ 112
Query: 421 WEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARLGDFGLARTIQENL 479
E S +A+ + HN VLHRDIK NI++D + +L DFG +++ +
Sbjct: 113 EELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 169
Query: 480 KTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQ 533
T + P ++ + GR+ +++ G+L+ ++ CG P E+
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYH-GRSAA---VWSLGILLYDMVCGDIPFEHDEE 219
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 99/234 (42%), Gaps = 29/234 (12%)
Query: 318 TGNFNPKNKLGKGGFGTVYK--GIWRNKEIA--VKRVSETSRQGKQEFIAEVTTIGSLRH 373
T + +LGKG F V + + +E A + + S + Q+ E L+H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI----FYDETNSGPGEVTLNWEKRLSVIH 429
N+V+L E L+++ + G L + I +Y E ++ H
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---------------H 114
Query: 430 GTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTK 486
Q L+ + + + V+HR++K N++L S+ +L DFGLA ++ +
Sbjct: 115 CIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG-- 172
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSI 540
AGTPGY++PE D++A GV++ + G P +Q+ I
Sbjct: 173 -FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI 225
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 30/246 (12%)
Query: 293 DDIEGLINGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVK 348
+D EG++ L P + E ++ + ++G+G FG V++ ++K+ AVK
Sbjct: 35 EDNEGVLLTEKLKPVDY---EYREEVHWMTHQPRVGRGSFGEVHR--MKDKQTGFQCAVK 89
Query: 349 RVS-ETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFY 407
+V E R + E+ L +V L G E + E + GSL + I
Sbjct: 90 KVRLEVFR------VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-- 141
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN-ARL 466
G L ++ L + + L+YLH +R+LH D+K+ N++L S+ + A L
Sbjct: 142 --KQMG----CLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAAL 192
Query: 467 GDFGLARTIQEN--LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACG 524
DFG A +Q + K+ + I GT +MAPE + + DI++ ++L + G
Sbjct: 193 CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
Query: 525 RKPGNQ 530
P Q
Sbjct: 253 CHPWTQ 258
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 30/246 (12%)
Query: 293 DDIEGLINGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKE----IAVK 348
+D EG++ L P + E ++ + ++G+G FG V++ ++K+ AVK
Sbjct: 51 EDNEGVLLTEKLKPVDY---EYREEVHWMTHQPRVGRGSFGEVHR--MKDKQTGFQCAVK 105
Query: 349 RVS-ETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFY 407
+V E R + E+ L +V L G E + E + GSL + I
Sbjct: 106 KVRLEVFR------VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-- 157
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN-ARL 466
G L ++ L + + L+YLH +R+LH D+K+ N++L S+ + A L
Sbjct: 158 --KQMG----CLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAAL 208
Query: 467 GDFGLARTIQEN--LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACG 524
DFG A +Q + K+ + I GT +MAPE + + DI++ ++L + G
Sbjct: 209 CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
Query: 525 RKPGNQ 530
P Q
Sbjct: 269 CHPWTQ 274
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 31/257 (12%)
Query: 284 RRYRARELD---DDIEGLINGTNLAPKKFRLKE-LKKATGNFNPKNKLGKGGFGTVYKGI 339
R R+RE +D EG++ L P + +E + AT +LG+G FG V++
Sbjct: 39 RGSRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQL----RLGRGSFGEVHRME 94
Query: 340 WRNK--EIAVKRVS-ETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYM 396
+ + AVK+V E R E+ L +V L G E + E +
Sbjct: 95 DKQTGFQCAVKKVRLEVFR------AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELL 148
Query: 397 PNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNI 456
GSL + + + L ++ L + + L+YLH+ +R+LH D+K+ N+
Sbjct: 149 EGGSLGQLVKE--------QGCLPEDRALYYLGQALEGLEYLHS---RRILHGDVKADNV 197
Query: 457 MLDSE-FNARLGDFGLARTIQEN--LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYA 513
+L S+ +A L DFG A +Q + K + I GT +MAPE L + D+++
Sbjct: 198 LLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWS 257
Query: 514 FGVLILEVACGRKPGNQ 530
++L + G P Q
Sbjct: 258 SCCMMLHMLNGCHPWTQ 274
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 29/235 (12%)
Query: 312 KELKKATGNFNPKNKLGKGGFGTVYKGIW--RNKEIAVKRVSETSRQGKQEFI------A 363
KE + + LG GGFG+VY GI N +A+K V + E
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 364 EVTTIGSLR--HRNLVKLIGWCYERHD-FLLVYEYM-PNGSLDKFIFYDETNSGPGEVTL 419
EV + + +++L+ W +ER D F+L+ E M P L FI T G L
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDW-FERPDSFVLILERMEPVQDLFDFI----TERG----AL 111
Query: 420 NWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLD-SEFNARLGDFGLARTIQEN 478
E S +A+ + HN VLHRDIK NI++D + +L DFG +++
Sbjct: 112 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 168
Query: 479 LKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQ 533
+ T + P ++ + GR+ +++ G+L+ ++ CG P E+
Sbjct: 169 VYTDFDGTRVYSPPEWIRYHRYH-GRSAA---VWSLGILLYDMVCGDIPFEHDEE 219
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 37/226 (16%)
Query: 327 LGKGGFGTVYKG--IWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLR-HRNLVKLIGWC 383
L +GGF VY+ + +E A+KR+ + + I EV + L H N+V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 384 ---YERHD-----FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
E D FLL+ E + G L +F+ E+ GP L+ + L + + T +A+
Sbjct: 96 SIGKEESDTGQAEFLLLTE-LCKGQLVEFLKKMESR-GP----LSCDTVLKIFYQTCRAV 149
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA------ 489
++H + ++HRD+K N++L ++ +L DFG A TI S + A
Sbjct: 150 QHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 490 ---GTPGYMAPE------SFLVGRATIETDIYAFGVLILEVACGRK 526
TP Y PE +F +G + DI+A G IL + C R+
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGE---KQDIWALGC-ILYLLCFRQ 250
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 327 LGKGGFGTVYKGIW--RNKEIAVKRVSETSRQGKQEFI------AEVTTIGSLR--HRNL 376
LG GGFG+VY GI N +A+K V + E EV + + +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 377 VKLIGWCYERHD-FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
++L+ W +ER D F+L+ E P D F F E + L E S +A+
Sbjct: 72 IRLLDW-FERPDSFVLILE-RPEPVQDLFDFITERGA------LQEELARSFFWQVLEAV 123
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLD-SEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+ HN VLHRDIK NI++D + +L DFG +++ + T + P +
Sbjct: 124 RHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 180
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQ 533
+ + GR+ +++ G+L+ ++ CG P E+
Sbjct: 181 IRYHRYH-GRSAA---VWSLGILLYDMVCGDIPFEHDEE 215
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 29/158 (18%)
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA- 434
LVKL + + +V EYMP G + F G R S H A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIG----------RFSEPHARFYAA 148
Query: 435 -----LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA 489
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T +
Sbjct: 149 QIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVK------GRTWXLC 199
Query: 490 GTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
GTP Y+APE L D +A GVLI E+A G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 327 LGKGGFGTVYKGIW--RNKEIAVKRVSETSRQGKQEFI------AEVTTIGSLR--HRNL 376
LG GGFG+VY GI N +A+K V + E EV + + +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 377 VKLIGWCYERHD-FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
++L+ W +ER D F+L+ E P D F F E + L E S +A+
Sbjct: 75 IRLLDW-FERPDSFVLILE-RPEPVQDLFDFITERGA------LQEELARSFFWQVLEAV 126
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLD-SEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+ HN VLHRDIK NI++D + +L DFG +++ + T + P +
Sbjct: 127 RHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 183
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQ 533
+ + GR+ +++ G+L+ ++ CG P E+
Sbjct: 184 IRYHRYH-GRSAA---VWSLGILLYDMVCGDIPFEHDEE 218
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 29/158 (18%)
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA- 434
LVKL + + +V EYMP G + F G R S H A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIG----------RFSEPHARFYAA 148
Query: 435 -----LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA 489
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T +
Sbjct: 149 QIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVK------GRTWXLC 199
Query: 490 GTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
GTP Y+APE L D +A GVLI E+A G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 327 LGKGGFGTVYKGIW--RNKEIAVKRVSETSRQGKQEFI------AEVTTIGSLR--HRNL 376
LG GGFG+VY GI N +A+K V + E EV + + +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 377 VKLIGWCYERHD-FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
++L+ W +ER D F+L+ E P D F F E + L E S +A+
Sbjct: 72 IRLLDW-FERPDSFVLILE-RPEPVQDLFDFITERGA------LQEELARSFFWQVLEAV 123
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLD-SEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+ HN VLHRDIK NI++D + +L DFG +++ + T + P +
Sbjct: 124 RHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 180
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQ 533
+ + GR+ +++ G+L+ ++ CG P E+
Sbjct: 181 IRYHRYH-GRSAA---VWSLGILLYDMVCGDIPFEHDEE 215
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+M+D + ++ DFGLA+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGLAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 327 LGKGGFGTVYKGIW--RNKEIAVKRVSETSRQGKQEFI------AEVTTIGSLR--HRNL 376
LG GGFG+VY GI N +A+K V + E EV + + +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 377 VKLIGWCYERHD-FLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
++L+ W +ER D F+L+ E P D F F E + L E S +A+
Sbjct: 72 IRLLDW-FERPDSFVLILE-RPEPVQDLFDFITERGA------LQEELARSFFWQVLEAV 123
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLD-SEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+ HN VLHRDIK NI++D + +L DFG +++ + T + P +
Sbjct: 124 RHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 180
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQ 533
+ + GR+ +++ G+L+ ++ CG P E+
Sbjct: 181 IRYHRYH-GRSAA---VWSLGILLYDMVCGDIPFEHDEE 215
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 33/241 (13%)
Query: 302 TNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGKQ 359
T+ P KF +++ K T LG+G + V + KE AVK + + + +
Sbjct: 3 TDSLPGKF--EDMYKLTSEL-----LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRS 55
Query: 360 EFIAEVTTIGSLR-HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVT 418
EV T+ + ++N+++LI + + F LV+E + GS+ I +
Sbjct: 56 RVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHI--------QKQKH 107
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTI 475
N + V+ + ALD+LH K + HRD+K NI+ +S ++ DF L +
Sbjct: 108 FNEREASRVVRDVAAALDFLHT---KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGM 164
Query: 476 Q-ENLKTHHSTKEI---AGTPGYMAPE--SFLVGRATI---ETDIYAFGVLILEVACGRK 526
+ N T +T E+ G+ YMAPE +AT D+++ GV++ + G
Sbjct: 165 KLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYP 224
Query: 527 P 527
P
Sbjct: 225 P 225
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 33/223 (14%)
Query: 327 LGKGGFGTVYKG--IWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLR----------HR 374
LGKGGFGTV+ G + ++A+K + G VT + H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 375 NLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNS---GPGEVTLNWEKRLSVIHGT 431
+++L+ W + F+LV E P + D F + E GP
Sbjct: 99 GVIRLLDWFETQEGFMLVLE-RPLPAQDLFDYITEKGPLGEGPSRCFFG----------- 146
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFN-ARLGDFGLARTIQENLKTHHSTKEIAG 490
Q + + + + V+HRDIK NI++D A+L DFG + + T +
Sbjct: 147 -QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYS 205
Query: 491 TPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQ 533
P +++ + AT +++ G+L+ ++ CG P + ++
Sbjct: 206 PPEWISRHQYHALPAT----VWSLGILLYDMVCGDIPFERDQE 244
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+M+D + ++ DFGLA+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGLAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 23/227 (10%)
Query: 310 RLKELKKATGNFNPKNKLGKGGFGTV--YKGIWRNKEIAVKRVS--ETSRQGKQEFIAEV 365
++++L+ ++ +G+G FG V + K A+K +S E ++ F E
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 119
Query: 366 TTIGSLRHRNLVKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKR 424
I + + V + + ++ +L +V EYMP G L + +V W +
Sbjct: 120 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-------SNYDVPEKWARF 172
Query: 425 LSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHS 484
+ ALD +H+ +HRD+K N++LD + +L DFG + +
Sbjct: 173 YTA--EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 227
Query: 485 TKEIAGTPGYMAPESFLV----GRATIETDIYAFGVLILEVACGRKP 527
T GTP Y++PE G E D ++ GV + E+ G P
Sbjct: 228 TA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 27/229 (11%)
Query: 310 RLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKEI----AVKRVS--ETSRQGKQEFIA 363
++++L+ ++ +G+G FG V + R+K A+K +S E ++ F
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFW 122
Query: 364 EVTTIGSLRHRNLVKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWE 422
E I + + V + + ++ +L +V EYMP G L + +V W
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-------SNYDVPEKWA 175
Query: 423 KRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTH 482
+ + ALD +H+ +HRD+K N++LD + +L DFG + +
Sbjct: 176 RFYTA--EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 230
Query: 483 HSTKEIAGTPGYMAPESFLV----GRATIETDIYAFGVLILEVACGRKP 527
T GTP Y++PE G E D ++ GV + E+ G P
Sbjct: 231 CDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 320 NFNPKNKLGKGGFGT-VYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVK 378
+F PK+ LG G GT VY+G++ N+++AVKR+ + + S H N+++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRE--SDEHPNVIR 82
Query: 379 LIGWCYER-HDFLLVYEYMPNGSLDKFIFY-DETNSGPGEVTLNWEKRLSVIHGTSQALD 436
+C E+ F + + +L +++ D + G +TL + T+ L
Sbjct: 83 Y--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITL--------LQQTTSGLA 132
Query: 437 YLHNGSEKRVLHRDIKSSNIMLD-----SEFNARLGDFGLARTIQENLKTHHSTKEIAGT 491
+LH+ + ++HRD+K NI++ + A + DFGL + + + + GT
Sbjct: 133 HLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGT 189
Query: 492 PGYMAPESF---LVGRATIETDIYAFG-VLILEVACGRKPGNQSEQNSYN 537
G++APE T DI++ G V ++ G P +S Q N
Sbjct: 190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN 239
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 23/227 (10%)
Query: 310 RLKELKKATGNFNPKNKLGKGGFGTV--YKGIWRNKEIAVKRVS--ETSRQGKQEFIAEV 365
++++L+ ++ +G+G FG V + K A+K +S E ++ F E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 366 TTIGSLRHRNLVKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKR 424
I + + V + + ++ +L +V EYMP G L + +V W +
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-------SNYDVPEKWARF 177
Query: 425 LSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHS 484
+ ALD +H+ +HRD+K N++LD + +L DFG + +
Sbjct: 178 YTA--EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 232
Query: 485 TKEIAGTPGYMAPESFLV----GRATIETDIYAFGVLILEVACGRKP 527
T GTP Y++PE G E D ++ GV + E+ G P
Sbjct: 233 TA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY P G + F G R S H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIG----------RFSEPHARFY 146
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+M+D + ++ DFG A+ ++ T
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------GRTWX 197
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 101
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY P G + F G R S H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIG----------RFSEPHARFY 147
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+M+D + ++ DFG A+ ++ T
Sbjct: 148 AAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TWX 198
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 44/249 (17%)
Query: 298 LINGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQG 357
L N +NL +KE K ++ L +G F + NK A+K+ ++ +
Sbjct: 10 LSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEK 69
Query: 358 KQEFIA-----------------EVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGS 400
K++F E+ I +++ + G + ++YEYM N S
Sbjct: 70 KRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS 129
Query: 401 L---DKFIFYDETNSG---PGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSS 454
+ D++ F + N P +V +I + Y+HN EK + HRD+K S
Sbjct: 130 ILKFDEYFFVLDKNYTCFIPIQVIK------CIIKSVLNSFSYIHN--EKNICHRDVKPS 181
Query: 455 NIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG---YMAPESFLVGRAT--IET 509
NI++D +L DFG + + + K+I G+ G +M PE F + +
Sbjct: 182 NILMDKNGRVKLSDFGESEYMVD--------KKIKGSRGTYEFMPPEFFSNESSYNGAKV 233
Query: 510 DIYAFGVLI 518
DI++ G+ +
Sbjct: 234 DIWSLGICL 242
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+M+D + ++ DFG A+ ++ T + GTP Y
Sbjct: 155 FEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------GRTWXLCGTPEY 205
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+M+D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+M+D + ++ DFG A+ ++ T + GTP Y
Sbjct: 155 FEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------GRTWXLCGTPEY 205
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+M+D + ++ DFG A+ ++ T + GTP Y
Sbjct: 155 FEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------GRTWXLCGTPEY 205
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T +AGTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLAGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY P G + F G R S H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIG----------RFSEPHARFY 146
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+M+D + ++ DFG A+ ++ T
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 29/158 (18%)
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA- 434
LVKL + + +V EY+P G + F G R S H A
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFYAA 148
Query: 435 -----LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIA 489
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T +
Sbjct: 149 QIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVK------GRTWXLC 199
Query: 490 GTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
GTP Y+APE L D +A GVLI E+A G P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 326 KLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
+LG G FG V++ + + + K ++ K E++ + L H L+ L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
++++ +L+ E++ G L I ++ EV I+ QA + L + E
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV----------INYMRQACEGLKHMHE 167
Query: 444 KRVLHRDIKSSNIMLDSE--FNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
++H DIK NIM +++ + ++ DFGLA L K T + APE +
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLAT----KLNPDEIVKVTTATAEFAAPE--I 221
Query: 502 VGRATI--ETDIYAFGVLILEVACGRKP 527
V R + TD++A GVL + G P
Sbjct: 222 VDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 155 FEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR------TWXLCGTPEY 205
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2D3P|A Chain A, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|B Chain B, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|C Chain C, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|D Chain D, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3R|A Chain A, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|B Chain B, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|C Chain C, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|D Chain D, Cratylia Folibunda Seed Lectin At Acidic Ph
Length = 236
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 26 SLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVTYDVRGAPITNQSGRAIYKDQFQLWRDN 84
SLHF F F++ ++ L D ST + +Q+T G+P +N GRA+Y +W D
Sbjct: 125 SLHFTFNQFSQNPKDLILQGDASTDSDGNLQLTRVSNGSPQSNSVGRALYYAPVHVW-DK 183
Query: 85 KNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
V A+F TF I + + +G+AF IA + +P S G+ LG+
Sbjct: 184 SAVVASFDATFTFLIKSTDSDIADGIAFFIANTDSSIPHGSGGRLLGL 231
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 144 IVAIEFDTKKSYE-QDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYD--GQN 200
IVA+E DT + + D N H+G+++ S IR TR N+ +G + Y+ +
Sbjct: 4 IVAVELDTYPNTDIGDPNYQHIGINIKS---IRSKATTRWNVQDGKVGTAHISYNSVAKR 60
Query: 201 ITVFVA--NMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
++ V+ + +S +DL+ LPE V VG SASTG + N + SW+F
Sbjct: 61 LSAIVSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGLYKETNTILSWSF 111
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 93
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY+P G + F G R S H
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFY 139
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+++D + ++ DFG A+ ++ T
Sbjct: 140 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWX 190
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 191 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY+P G + F G R S H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFY 146
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+++D + ++ DFG A+ ++ T
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY+P G + F G R S H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFY 146
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+++D + ++ DFG A+ ++ T
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY+P G + F G R S H
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFY 146
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+++D + ++ DFG A+ ++ T
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 23/218 (10%)
Query: 320 NFNPKNKLGKGGFGTVYKG--IWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNL- 376
+ P +LG+G +G V K + + AVKR+ T +Q+ + I S R +
Sbjct: 35 DLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDI-SXRTVDCP 93
Query: 377 --VKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQA 434
V G + D + E + + SLDKF Y + + + +++V +A
Sbjct: 94 FTVTFYGALFREGDVWICXE-LXDTSLDKF--YKQVIDKGQTIPEDILGKIAV--SIVKA 148
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEI-AGTPG 493
L++LH S+ V+HRD+K SN+++++ + DFG++ + +++ K+I AG
Sbjct: 149 LEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDV-----AKDIDAGCKP 201
Query: 494 YMAPESF---LVGRA-TIETDIYAFGVLILEVACGRKP 527
Y APE L + ++++DI++ G+ +E+A R P
Sbjct: 202 YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFP 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY+P G + F G R S H
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFY 146
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+++D + ++ DFG A+ ++ T
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 101
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY+P G + F G R S H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFY 147
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+++D + ++ DFG A+ ++ T
Sbjct: 148 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 198
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 101
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY+P G + F G R S H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFY 147
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+++D + ++ DFG A+ ++ T
Sbjct: 148 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWX 198
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY+P G + F G R S H
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFY 146
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+++D + ++ DFG A+ ++ T
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 100
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY+P G + F G R S H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFY 146
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+++D + ++ DFG A+ ++ T
Sbjct: 147 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 101
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY+P G + F G R S H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFY 147
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+++D + ++ DFG A+ ++ T
Sbjct: 148 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 198
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 101
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY+P G + F G R S H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFY 147
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+++D + ++ DFG A+ ++ T
Sbjct: 148 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWX 198
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 20/224 (8%)
Query: 327 LGKGGFGTVYKGIWRN--KEIAVKRVSE---TSRQG--KQEFIAEVTTIGSLRHRNLVKL 379
+GKG F V + I R ++ AVK V TS G ++ E + L+H ++V+L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
+ +V+E+M L F ++G + + ++ H Q L+ L
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL-CFEIVKRADAG-----FVYSEAVAS-HYMRQILEALR 144
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNA---RLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
+ ++HRD+K N++L S+ N+ +LGDFG+A + E+ GTP +MA
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR---VGTPHFMA 201
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSI 540
PE D++ GV++ + G P +++ + I
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII 245
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 86
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY+P G + F G R S H
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFY 132
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+++D + ++ DFG A+ ++ T
Sbjct: 133 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWT 183
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 184 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 101
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY+P G + F G R S H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFY 147
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+++D + ++ DFG A+ ++ T
Sbjct: 148 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWT 198
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 50/220 (22%)
Query: 327 LGKGGFGTVY-------------KGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRH 373
LG G FG V K + + K + +K++ T + E + ++
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEKRILQAVNF 121
Query: 374 RNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
LVKL + + +V EY+P G + F G R S H
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIG----------RFSEPHARFY 167
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A +YLH+ +++RD+K N+++D + ++ DFG A+ ++ T
Sbjct: 168 AAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWX 218
Query: 488 IAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ GTP Y+APE L D +A GVLI E+A G P
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ +T + GTP Y
Sbjct: 175 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GATWTLCGTPEY 225
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1IOA|A Chain A, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus
Vulgaris
pdb|1IOA|B Chain B, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus
Vulgaris
Length = 240
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 25/232 (10%)
Query: 29 FNFQSFTEQNRNELSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWRDNKNV 87
FNF +F ++ L + + +K +Q+T P + GRA Y D Q+ +D+ NV
Sbjct: 6 FNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQI-KDSNNV 64
Query: 88 KATFST--TFVLNILNQTAQPGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGTNQSQIV 145
A+F+T TF++ NQ+ GLAF + P+ + ++LGI N N ++ V
Sbjct: 65 -ASFNTNFTFIIRAKNQSIS-AYGLAFALVPVNSPPQKKQ-EFLGIFN-TNNPEPNARTV 120
Query: 146 AIEFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQNITV-- 203
A+ F+T K+ D + N + VN + NG VQ+ YD N +
Sbjct: 121 AVVFNTFKN-RIDFDKNFIKPYVNENCDFHKY--------NGEKTDVQITYDSSNNDLRV 171
Query: 204 ---FVANMETPLLSEPIDLSEYLPEKVFVGFSASTG---DDTQLNCVKSWAF 249
F + +S + L + + E V VGFS ++G D T+ + V SW+F
Sbjct: 172 FLHFTVSQVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWSF 223
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 149 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 199
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 200 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 147 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPEY 197
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP
Sbjct: 140 TFEYLHSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAKRVK------GRTWXLCGTPE 190
Query: 494 YMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
Y+APE L D +A GVLI E+A G P
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 46/262 (17%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKL--- 379
+G+G +G V Y + + + +A+K++S Q Q + E+ + + RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDI 91
Query: 380 --IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ D +V + M L K + L+ + ++ + L Y
Sbjct: 92 IRAPTIEQMKDVYIVQDLM-ETDLYKLL---------KTQHLSNDHICYFLYQILRGLKY 141
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
+H+ + VLHRD+K SN++L++ + ++ DFGLAR + E T Y AP
Sbjct: 142 IHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 498 ESFLVGRA-TIETDIYAFGVLILEVACGRK--PGNQSEQNSYNNSIVHWLWELRRKGRIL 554
E L + T DI++ G ++ E+ R PG H+L +L IL
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK------------HYLDQLNHILGIL 246
Query: 555 DAADSRLGGEFSEKEMECVLIL 576
G S++++ C++ L
Sbjct: 247 --------GSPSQEDLNCIINL 260
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 155 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 205
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 155 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 205
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 327 LGKGGFGTVYKGIWRN--KEIAVKRVSE------TSRQGKQEF--IAEVTTIGSLRHRNL 376
LG G G V R K++A+K +S+ ++R+ E+ + L H +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+K+ + ++ D+ +V E M G L DK + N E T + A+
Sbjct: 77 IKIKNF-FDAEDYYIVLELMEGGELFDKVV----GNKRLKEATCKL-----YFYQMLLAV 126
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTKEIAGTP 492
YLH E ++HRD+K N++L S+ ++ DFG ++ + E + + GTP
Sbjct: 127 QYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTP 179
Query: 493 GYMAPESFL-VGRATI--ETDIYAFGVLILEVACGRKP 527
Y+APE + VG A D ++ GV++ G P
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 327 LGKGGFGTVYKGIWRN--KEIAVKRVSE------TSRQGKQEF--IAEVTTIGSLRHRNL 376
LG G G V R K++A+K +S+ ++R+ E+ + L H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+K+ + ++ D+ +V E M G L DK + N E T + A+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVV----GNKRLKEATCKL-----YFYQMLLAV 127
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTKEIAGTP 492
YLH E ++HRD+K N++L S+ ++ DFG ++ + E + + GTP
Sbjct: 128 QYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTP 180
Query: 493 GYMAPESFL-VGRATI--ETDIYAFGVLILEVACGRKP 527
Y+APE + VG A D ++ GV++ G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 327 LGKGGFGTVYKGIWRN--KEIAVKRVSE------TSRQGKQEF--IAEVTTIGSLRHRNL 376
LG G G V R K++A+K +S+ ++R+ E+ + L H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+K+ + ++ D+ +V E M G L DK + N E T + A+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVV----GNKRLKEATCKL-----YFYQMLLAV 127
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTKEIAGTP 492
YLH E ++HRD+K N++L S+ ++ DFG ++ + E + + GTP
Sbjct: 128 QYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTP 180
Query: 493 GYMAPESFL-VGRATI--ETDIYAFGVLILEVACGRKP 527
Y+APE + VG A D ++ GV++ G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 327 LGKGGFGTVYKGIWRN--KEIAVKRVSE------TSRQGKQEF--IAEVTTIGSLRHRNL 376
LG G G V R K++A+K +S+ ++R+ E+ + L H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+K+ + ++ D+ +V E M G L DK + N E T + A+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVV----GNKRLKEATCKL-----YFYQMLLAV 127
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTKEIAGTP 492
YLH E ++HRD+K N++L S+ ++ DFG ++ + E + + GTP
Sbjct: 128 QYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTP 180
Query: 493 GYMAPESFL-VGRATI--ETDIYAFGVLILEVACGRKP 527
Y+APE + VG A D ++ GV++ G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 327 LGKGGFGTVYKGI-WRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
LG+G FG V++ + +K+ + + + + E++ + RHRN++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 386 RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKR 445
+ ++++E++ LD F + N+ E LN + +S +H +AL +LH+ +
Sbjct: 73 MEELVMIFEFI--SGLDIF---ERINTSAFE--LNEREIVSYVHQVCEALQFLHSHN--- 122
Query: 446 VLHRDIKSSNIMLDSEFNA--RLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVG 503
+ H DI+ NI+ + ++ ++ +FG AR LK + + + P Y APE
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQAR----QLKPGDNFRLLFTAPEYYAPEVHQHD 178
Query: 504 RATIETDIYAFGVLILEVACGRKP 527
+ TD+++ G L+ + G P
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINP 202
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 327 LGKGGFGTVYKGIWRN--KEIAVKRVSE------TSRQGKQEF--IAEVTTIGSLRHRNL 376
LG G G V R K++A+K +S+ ++R+ E+ + L H +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+K+ + ++ D+ +V E M G L DK + N E T + A+
Sbjct: 84 IKIKNF-FDAEDYYIVLELMEGGELFDKVV----GNKRLKEATCKL-----YFYQMLLAV 133
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTKEIAGTP 492
YLH E ++HRD+K N++L S+ ++ DFG ++ + E + + GTP
Sbjct: 134 QYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTP 186
Query: 493 GYMAPESFL-VGRATI--ETDIYAFGVLILEVACGRKP 527
Y+APE + VG A D ++ GV++ G P
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 175 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPEY 225
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLXGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 327 LGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLIGWC 383
+G+G +G V R +A+K++S Q Q + E+ + RH N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGI---- 106
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEV----TLNWEKRLSVIHGTSQALDYLH 439
D L D +I D + ++ L+ + ++ + L Y+H
Sbjct: 107 ---RDILRASTL--EAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIH 161
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
+ + VLHRD+K SN+++++ + ++ DFGLAR E T Y APE
Sbjct: 162 SAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 500 FLVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
L + T DI++ G ++ E+ R PG
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 26/216 (12%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKL--- 379
+G+G +G V Y + + + +A+K++S Q Q + E+ + RH N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 109
Query: 380 --IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ D LV M L K + L+ + ++ + L Y
Sbjct: 110 IRAPTIEQMKDVYLVTHLM-GADLYKLL---------KTQHLSNDHICYFLYQILRGLKY 159
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
+H+ + VLHRD+K SN++L++ + ++ DFGLAR + E T Y AP
Sbjct: 160 IHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 498 ESFLVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
E L + T DI++ G ++ E+ R PG
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|1MVQ|A Chain A, Cratylia Mollis Lectin (Isoform 1) In Complex With
Methyl-Alpha-D- Mannose
Length = 236
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 26 SLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVTYDVRGAPITNQSGRAIYKDQFQLWRDN 84
SLHF F F++ ++ L D ST + +Q+T G+P ++ GRA+Y +W D
Sbjct: 125 SLHFTFNQFSQSPKDLILQGDASTDSDGNLQLTRVSNGSPQSDSVGRALYYAPVHIW-DK 183
Query: 85 KNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
V A+F TF I + + +G+AF IA + +P S G+ LG+
Sbjct: 184 SAVVASFDATFTFLIKSPDREIADGIAFFIANTDSSIPHGSGGRLLGL 231
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 144 IVAIEFDTKKSYEQDIND---NHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYD--G 198
IVA+E DT DI D H+G+++ S IR TR ++ NG + Y+
Sbjct: 4 IVAVELDTYP--NTDIGDPSYQHIGINIKS---IRSKATTRWDVQNGKVGTAHISYNSVA 58
Query: 199 QNITVFVA--NMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
+ ++ V+ + +S +DL+ LPE V VG SASTG + N + SW+F
Sbjct: 59 KRLSAVVSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGLYKETNTILSWSF 111
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKL--- 379
+G+G +G V Y + + + +A+K++S Q Q + E+ + + RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDI 91
Query: 380 --IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ D +V + M L K + L+ + ++ + L Y
Sbjct: 92 IRAPTIEQMKDVYIVQDLM-ETDLYKLL---------KTQHLSNDHICYFLYQILRGLKY 141
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
+H+ + VLHRD+K SN++L++ + ++ DFGLAR + E T Y AP
Sbjct: 142 IHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 498 ESFLVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
E L + T DI++ G ++ E+ R PG
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 181
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
Query: 65 ITNQSGRAIYKDQFQLWRDNKNVKATFST--TFVLNILNQTAQPGEGLAFVIAGNKDLPE 122
+ N GRA+Y +W A F T TFV++ N + +G F IA P+
Sbjct: 37 VRNTVGRALYSSPIHIWDSKTGNVANFVTSFTFVIDAPN-SYNVADGFTFFIAPVDTKPQ 95
Query: 123 NSEGQWLGIVNGITNGTNQSQIVAIEFDT--KKSYEQDINDNHVGLDVNSVYSIRQVPLT 180
+ G +LG+ N + SQ VA+EFDT +++ D H+G+DVNS+ SI
Sbjct: 96 -TGGGYLGVFNS-KDYDKTSQTVAVEFDTFYNTAWDPSNGDRHIGIDVNSIKSINTKSWA 153
Query: 181 RVNLANGTDIKVQVRYDG 198
L NG + V + ++G
Sbjct: 154 ---LQNGKEANVVIAFNG 168
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKL--- 379
+G+G +G V Y + + + +A+K++S Q Q + E+ + RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 380 --IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ D +V + M L K + L+ + ++ + L Y
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLL---------KTQHLSNDHICYFLYQILRGLKY 139
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
+H+ + VLHRD+K SN++L++ + ++ DFGLAR + E T Y AP
Sbjct: 140 IHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 498 ESFLVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
E L + T DI++ G ++ E+ R PG
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKL--- 379
+G+G +G V Y + + + +A+K++S Q Q + E+ + RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 380 --IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ D +V + M L K + L+ + ++ + L Y
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLL---------KTQHLSNDHICYFLYQILRGLKY 139
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
+H+ + VLHRD+K SN++L++ + ++ DFGLAR + E T Y AP
Sbjct: 140 IHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 498 ESFLVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
E L + T DI++ G ++ E+ R PG
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|C Chain C, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|E Chain E, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 181
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
Query: 65 ITNQSGRAIYKDQFQLWRDNKNVKATFST--TFVLNILNQTAQPGEGLAFVIAGNKDLPE 122
+ N GRA+Y +W A F T TFV++ N + +G F IA P+
Sbjct: 37 VRNTVGRALYSSPIHIWDSKTGNVANFVTSFTFVIDAPN-SYNVADGFTFFIAPVDTKPQ 95
Query: 123 NSEGQWLGIVNGITNGTNQSQIVAIEFDT--KKSYEQDINDNHVGLDVNSVYSIRQVPLT 180
+ G +LG+ N + SQ VA+EFDT +++ D H+G+DVNS+ SI
Sbjct: 96 -TGGGYLGVFNS-KDYDKTSQTVAVEFDTFYNTAWDPSNGDRHIGIDVNSIKSINTKSW- 152
Query: 181 RVNLANGTDIKVQVRYDG 198
L NG + V + ++G
Sbjct: 153 --KLQNGKEANVVIAFNG 168
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLIGW 382
+G+G +G V Y + + + +A+K++S Q Q + E+ + RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--- 86
Query: 383 CYERHDFLLV--YEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+D + E M + + + + + L+ + ++ + L Y+H+
Sbjct: 87 ----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
+ VLHRD+K SN++L++ + ++ DFGLAR + E T Y APE
Sbjct: 143 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 501 LVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
L + T DI++ G ++ E+ R PG
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKL--- 379
+G+G +G V Y + + + +A+K++S Q Q + E+ + RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 380 --IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ D +V + M L K + L+ + ++ + L Y
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLL---------KTQHLSNDHICYFLYQILRGLKY 139
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
+H+ + VLHRD+K SN++L++ + ++ DFGLAR + E T Y AP
Sbjct: 140 IHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 498 ESFLVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
E L + T DI++ G ++ E+ R PG
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLIGW 382
+G+G +G V Y + + + +A+K++S Q Q + E+ + RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--- 88
Query: 383 CYERHDFLLV--YEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+D + E M + + + + + L+ + ++ + L Y+H+
Sbjct: 89 ----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
+ VLHRD+K SN++L++ + ++ DFGLAR + E T Y APE
Sbjct: 145 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 501 LVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
L + T DI++ G ++ E+ R PG
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|2B7Y|A Chain A, Fava Bean Lectin-Glucose Complex
pdb|2B7Y|C Chain C, Fava Bean Lectin-Glucose Complex
Length = 182
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 65 ITNQSGRAIYKDQFQLWRDNKNVKATFSTTFVLNILNQTA-QPGEGLAFVIAGNKDLPEN 123
+ N GRA+Y +W A F+TTF+ I +G F IA P+
Sbjct: 38 VKNTVGRALYSLPIHIWDSETGNVADFTTTFIFVIDAPNGYNVADGFTFFIAPVDTKPQ- 96
Query: 124 SEGQWLGIVNGITNGTNQSQIVAIEFDT--KKSYEQDINDNHVGLDVNSVYSIRQVPLTR 181
+ G +LG+ NG + +Q VA+EFDT +++ H+G+DVN++ SI
Sbjct: 97 TGGGYLGVFNG-KDYDKTAQTVAVEFDTFYNAAWDPSNGKRHIGIDVNTIKSIST---KS 152
Query: 182 VNLANGTDIKVQVRYDG 198
NL NG + V + ++
Sbjct: 153 WNLQNGEEAHVAISFNA 169
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 34/237 (14%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRV-SETSRQG-KQEFIAEVTTIGSLRHRNLVKLIG 381
K+G+G FG V+K R +++A+K+V E ++G + E+ + L+H N+V LI
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 382 WC------YERH--DFLLVYEYMPN---GSLDKFIFYDETNSGPGEVTLNWEKRLSVIHG 430
C Y R LV+++ + G L + + TL+ KR V+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---------KFTLSEIKR--VMQM 133
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR--TIQENLKTHHSTKEI 488
L Y+H ++LHRD+K++N+++ + +L DFGLAR ++ +N + + +
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 489 AGTPGYMAPESFLVGRAT-IETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWL 544
T Y PE L R D++ G ++ E+ R P Q + +++ L
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQL 245
>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex
pdb|1OFS|C Chain C, Pea Lectin-sucrose Complex
Length = 187
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 65 ITNQSGRAIYKDQFQLW-RDNKNVKATFST--TFVLNILNQTAQPGEGLAFVIAGNKDLP 121
+ N GRA+Y +W R+ NV A F T TFV+N N + +G F IA P
Sbjct: 37 VKNTVGRALYSSPIHIWDRETGNV-ANFVTSFTFVINAPN-SYNVADGFTFFIAPVDTKP 94
Query: 122 ENSEGQWLGIVNGITNGTNQSQIVAIEFDT--KKSYEQDINDNHVGLDVNSVYSIRQVPL 179
+ + G +LG+ N +Q VA+EFDT +++ D H+G+DVN SI+ V
Sbjct: 95 Q-TGGGYLGVFNS-AEYDKTTQTVAVEFDTFYNAAWDPSNRDRHIGIDVN---SIKSVNT 149
Query: 180 TRVNLANGTDIKVQVRYDGQNITVFVANMETPLLSEPIDLSE 221
L NG + V + ++ N+ T L+ P L E
Sbjct: 150 KSWKLQNGEEANVVIAFNA------ATNVLTVSLTYPNSLEE 185
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSETSRQG-KQEFIAEVTTIGSLRHRNLVKL--- 379
+G+G +G V Y + + + +A+K++S Q Q + E+ + RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDI 93
Query: 380 --IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ D +V + M L K + L+ + ++ + L Y
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLL---------KTQHLSNDHICYFLYQILRGLKY 143
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
+H+ + VLHRD+K SN++L++ + ++ DFGLAR + E T Y AP
Sbjct: 144 IHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 498 ESFLVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
E L + T DI++ G ++ E+ R PG
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 34/237 (14%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRV-SETSRQG-KQEFIAEVTTIGSLRHRNLVKLIG 381
K+G+G FG V+K R +++A+K+V E ++G + E+ + L+H N+V LI
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 382 WC------YER--HDFLLVYEYMPN---GSLDKFIFYDETNSGPGEVTLNWEKRLSVIHG 430
C Y R LV+++ + G L + + TL+ KR V+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV---------KFTLSEIKR--VMQM 133
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR--TIQENLKTHHSTKEI 488
L Y+H ++LHRD+K++N+++ + +L DFGLAR ++ +N + + +
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 489 AGTPGYMAPESFLVGRAT-IETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWL 544
T Y PE L R D++ G ++ E+ R P Q + +++ L
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQL 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLIGW 382
+G+G +G V Y + + + +A+K++S Q Q + E+ + RH N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--- 94
Query: 383 CYERHDFLLV--YEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+D + E M + + + + + L+ + ++ + L Y+H+
Sbjct: 95 ----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 150
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
+ VLHRD+K SN++L++ + ++ DFGLAR + E T Y APE
Sbjct: 151 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 501 LVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
L + T DI++ G ++ E+ R PG
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLIGW 382
+G+G +G V Y + + + +A+K++S Q Q + E+ + RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--- 86
Query: 383 CYERHDFLLV--YEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+D + E M + + + + + L+ + ++ + L Y+H+
Sbjct: 87 ----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
+ VLHRD+K SN++L++ + ++ DFGLAR + E T Y APE
Sbjct: 143 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 501 LVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
L + T DI++ G ++ E+ R PG
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 34/237 (14%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRV-SETSRQG-KQEFIAEVTTIGSLRHRNLVKLIG 381
K+G+G FG V+K R +++A+K+V E ++G + E+ + L+H N+V LI
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 382 WC------YERH--DFLLVYEYMPN---GSLDKFIFYDETNSGPGEVTLNWEKRLSVIHG 430
C Y R LV+++ + G L + + TL+ KR V+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---------KFTLSEIKR--VMQM 133
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR--TIQENLKTHHSTKEI 488
L Y+H ++LHRD+K++N+++ + +L DFGLAR ++ +N + + +
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 489 AGTPGYMAPESFLVGRAT-IETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWL 544
T Y PE L R D++ G ++ E+ R P Q + +++ L
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQL 245
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 81
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF----IFYDETNSGPGEVT---LNWEKRL 425
H+N++ L+ + P SL++F I + ++ +V L+ E+
Sbjct: 82 HKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMM 182
Query: 486 KEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGR 525
+ T Y APE L DI++ G ++ E+ C +
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 327 LGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKL---- 379
+G+G +G V +A+K++S Q Q + E+ + RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 380 -IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYL 438
+ D +V + M L K + L+ + ++ + L Y+
Sbjct: 95 RAPTIEQMKDVYIVQDLM-ETDLYKLL---------KTQHLSNDHICYFLYQILRGLKYI 144
Query: 439 HNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPE 498
H+ + VLHRD+K SN++L++ + ++ DFGLAR + E T Y APE
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
Query: 499 SFLVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
L + T DI++ G ++ E+ R PG
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 18/212 (8%)
Query: 327 LGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLIGWC 383
+G+G +G V +A+K++S Q Q + E+ + RH N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 84
Query: 384 YERHDFLLV--YEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+D + E M + + + + + L+ + ++ + L Y+H+
Sbjct: 85 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 141
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+ VLHRD+K SN++L++ + ++ DFGLAR + E T Y APE L
Sbjct: 142 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 502 VGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
+ T DI++ G ++ E+ R PG
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 327 LGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKL---- 379
+G+G +G V +A+K++S Q Q + E+ + RH N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 380 -IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYL 438
+ D +V + M L K + L+ + ++ + L Y+
Sbjct: 96 RAPTIEQMKDVYIVQDLM-ETDLYKLL---------KTQHLSNDHICYFLYQILRGLKYI 145
Query: 439 HNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPE 498
H+ + VLHRD+K SN++L++ + ++ DFGLAR + E T Y APE
Sbjct: 146 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
Query: 499 SFLVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
L + T DI++ G ++ E+ R PG
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI ++A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 18/212 (8%)
Query: 327 LGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLIGWC 383
+G+G +G V +A+K++S Q Q + E+ + RH N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 91
Query: 384 YERHDFLLV--YEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+D + E M + + + + + L+ + ++ + L Y+H+
Sbjct: 92 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 148
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+ VLHRD+K SN++L++ + ++ DFGLAR + E T Y APE L
Sbjct: 149 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 502 VGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
+ T DI++ G ++ E+ R PG
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 327 LGKGGFGTVYKGIWRN--KEIAVKRVSE------TSRQGKQEF--IAEVTTIGSLRHRNL 376
LG G G V R K++A++ +S+ ++R+ E+ + L H +
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+K+ + ++ D+ +V E M G L DK + N E T + A+
Sbjct: 217 IKIKNF-FDAEDYYIVLELMEGGELFDKVV----GNKRLKEATCKL-----YFYQMLLAV 266
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTKEIAGTP 492
YLH E ++HRD+K N++L S+ ++ DFG ++ + E + + GTP
Sbjct: 267 QYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTP 319
Query: 493 GYMAPESFL-VGRATIE--TDIYAFGVLILEVACGRKPGNQ 530
Y+APE + VG A D ++ GV++ G P ++
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 18/212 (8%)
Query: 327 LGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLIGWC 383
+G+G +G V +A+K++S Q Q + E+ + RH N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 92
Query: 384 YERHDFLLV--YEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+D + E M + + + + + L+ + ++ + L Y+H+
Sbjct: 93 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 149
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+ VLHRD+K SN++L++ + ++ DFGLAR + E T Y APE L
Sbjct: 150 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 502 VGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
+ T DI++ G ++ E+ R PG
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 18/212 (8%)
Query: 327 LGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLIGWC 383
+G+G +G V +A+K++S Q Q + E+ + RH N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 83
Query: 384 YERHDFLLV--YEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+D + E M + + + + + L+ + ++ + L Y+H+
Sbjct: 84 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 140
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+ VLHRD+K SN++L++ + ++ DFGLAR + E T Y APE L
Sbjct: 141 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 502 VGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
+ T DI++ G ++ E+ R PG
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 18/212 (8%)
Query: 327 LGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLIGWC 383
+G+G +G V +A+K++S Q Q + E+ + RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 384 YERHDFLLV--YEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+D + E M + + + + + L+ + ++ + L Y+H+
Sbjct: 91 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+ VLHRD+K SN++L++ + ++ DFGLAR + E T Y APE L
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 502 VGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
+ T DI++ G ++ E+ R PG
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKL--- 379
+G+G +G V Y + + + +A+K++S Q Q + E+ + RH N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 109
Query: 380 --IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
+ D +V + M L K + L+ + ++ + L Y
Sbjct: 110 IRAPTIEQMKDVYIVQDLM-ETDLYKLL---------KTQHLSNDHICYFLYQILRGLKY 159
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
+H+ + VLHRD+K SN++L++ + ++ DFGLAR + E T Y AP
Sbjct: 160 IHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 498 ESFLVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
E L + T DI++ G ++ E+ R PG
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLIIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE + D +A GVLI E+A G P
Sbjct: 205 LAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 34/237 (14%)
Query: 326 KLGKGGFGTVYKGIWRN--KEIAVKRV-SETSRQG-KQEFIAEVTTIGSLRHRNLVKLIG 381
K+G+G FG V+K R +++A+K+V E ++G + E+ + L+H N+V LI
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 382 WC------YERH--DFLLVYEYMPN---GSLDKFIFYDETNSGPGEVTLNWEKRLSVIHG 430
C Y R LV+++ + G L + + TL+ KR V+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---------KFTLSEIKR--VMQM 132
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR--TIQENLKTHHSTKEI 488
L Y+H ++LHRD+K++N+++ + +L DFGLAR ++ +N + + +
Sbjct: 133 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 489 AGTPGYMAPESFLVGRAT-IETDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWL 544
T Y PE L R D++ G ++ E+ R P Q + +++ L
Sbjct: 190 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQL 244
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 327 LGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKL---- 379
+G+G +G V +A+K++S Q Q + E+ + RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 380 -IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYL 438
+ D +V + M L K + L+ + ++ + L Y+
Sbjct: 95 RAPTIEQMKDVYIVQDLM-ETDLYKLL---------KTQHLSNDHICYFLYQILRGLKYI 144
Query: 439 HNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPE 498
H+ + VLHRD+K SN++L++ + ++ DFGLAR + E T Y APE
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 499 SFLVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
L + T DI++ G ++ E+ R PG
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 327 LGKGGFGTVYKGIWRN--KEIAVKRVSE------TSRQGKQEF--IAEVTTIGSLRHRNL 376
LG G G V R K++A++ +S+ ++R+ E+ + L H +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 377 VKLIGWCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
+K+ + ++ D+ +V E M G L DK + N E T + A+
Sbjct: 203 IKIKNF-FDAEDYYIVLELMEGGELFDKVV----GNKRLKEATCKL-----YFYQMLLAV 252
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHHSTKEIAGTP 492
YLH E ++HRD+K N++L S+ ++ DFG ++ + E + + GTP
Sbjct: 253 QYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTP 305
Query: 493 GYMAPESFL-VGRATIE--TDIYAFGVLILEVACGRKP 527
Y+APE + VG A D ++ GV++ G P
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 26/216 (12%)
Query: 327 LGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLIGWC 383
+G+G +G V +A+K++S Q Q + E+ + RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 384 YERHDFLLV--YEYMPNGSLDKFIFYDETNSGPGEVT----LNWEKRLSVIHGTSQALDY 437
+D + E M D +I D + ++ L+ + ++ + L Y
Sbjct: 91 ---NDIIRAPTIEQMK----DVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKY 143
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
+H+ + VLHRD+K SN++L++ + ++ DFGLAR + E T Y AP
Sbjct: 144 IHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 498 ESFLVGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
E L + T DI++ G ++ E+ R PG
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 18/212 (8%)
Query: 327 LGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLIGWC 383
+G+G +G V +A+K++S Q Q + E+ + RH N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 84
Query: 384 YERHDFLLV--YEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+D + E M + + + + + L+ + ++ + L Y+H+
Sbjct: 85 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 141
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+ VLHRD+K SN++L++ + ++ DFGLAR + E T Y APE L
Sbjct: 142 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 502 VGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
+ T DI++ G ++ E+ R PG
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 26/215 (12%)
Query: 316 KATGNFN-----PKNKLGKGGFGTVYKGIWRN--KEIAVKRVSETSR--QGKQEFIAEVT 366
++ NFN +LG+G F V + I ++ +E A K + + R + E + E+
Sbjct: 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIA 80
Query: 367 TIGSLRHRNLVKLIGWCYER-HDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRL 425
+ + V + YE + +L+ EY G + P + E
Sbjct: 81 VLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCL-------PELAEMVSEN-- 131
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEF---NARLGDFGLARTIQENLKTH 482
VI Q L+ ++ + ++H D+K NI+L S + + ++ DFG++R I +
Sbjct: 132 DVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL- 190
Query: 483 HSTKEIAGTPGYMAPESFLVGRATIETDIYAFGVL 517
+EI GTP Y+APE T TD++ G++
Sbjct: 191 ---REIMGTPEYLAPEILNYDPITTATDMWNIGII 222
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 43/216 (19%)
Query: 327 LGKGGFGTVYKGIWRN--KEIAVKRVSETSRQGKQEFIA-----EVTTIGSLRHRNLVKL 379
+G G +G+V I + +++A+K++S R + E A E+ + ++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLS---RPFQSEIFAKRAYRELLLLKHMQHENVIGL 88
Query: 380 I------GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
+ +DF LV +M L K + + + EK +++ +
Sbjct: 89 LDVFTPASSLRNFYDFYLVMPFM-QTDLQKIM----------GLKFSEEKIQYLVYQMLK 137
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAG--- 490
L Y+H+ V+HRD+K N+ ++ + ++ DFGLAR H+ E+ G
Sbjct: 138 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR---------HADAEMTGYVV 185
Query: 491 TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
T Y APE L +T DI++ G ++ E+ G+
Sbjct: 186 TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L
pdb|1AVB|B Chain B, Arcelin-1 From Phaseolus Vulgaris L
Length = 226
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 27/237 (11%)
Query: 29 FNFQSFTEQNRNELSFDNSTVAKSAIQVTYDVRGAPITNQSGRAIYKDQFQLWRDNKNVK 88
FN ++F + N + ++TV+ + +V+G + GRA Y Q+ +
Sbjct: 6 FNVETFNKTNL--ILQGDATVSSEGHLLLTNVKGNE-EDSMGRAFYSAPIQINDRTIDNL 62
Query: 89 ATFSTTFVLNILNQTAQ-PGEGLAFVIAGNKDLPENSEGQWLGIVNGITNGTNQSQIVAI 147
A+FST F I + + GLAF + P+ +G++LG+ N TN + VA+
Sbjct: 63 ASFSTNFTFRINAKNIENSAYGLAFALVPVGSRPK-LKGRYLGLFN-TTNYDRDAHTVAV 120
Query: 148 EFDTKKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLA--NGTDIKVQVRYDGQNITVFV 205
FDT N + +DVN SIR + N NG +V++ YD + V
Sbjct: 121 VFDTVS--------NRIEIDVN---SIRPIATESCNFGHNNGEKAEVRITYDSPKNDLRV 169
Query: 206 ANM-----ETPLLSEPIDLSEYLPEKVFVGFSASTG---DDTQLNCVKSWAFDGSDI 254
+ + E +S + L + + + V VGFSA++G + T+ + V SW+F + I
Sbjct: 170 SLLYPSSEEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFSSNFI 226
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
LD+LH+ +++RD+K NI+LD E + +L DFGL++ ++ K +S GT
Sbjct: 142 GLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS---FCGTVE 195
Query: 494 YMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
YMAPE + D +++GVL+ E+ G P
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 318 TGNFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQ-GKQEFIAEVTTIGSLRHR 374
+ +F K+ LG+G +G V + + +A+K++ + + E+ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 375 NLVKLIGW----CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHG 430
N++ + +E + + + + + L + I L+ + I+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---------STQMLSDDHIQYFIYQ 120
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK---- 486
T +A+ LH + V+HRD+K SN++++S + ++ DFGLAR I E+ +
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 487 ---EIAGTPGYMAPESFLV-GRATIETDIYAFGVLILEVACGR 525
E T Y APE L + + D+++ G ++ E+ R
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1WUV|A Chain A, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|D Chain D, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|G Chain G, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|J Chain J, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|2D7F|A Chain A, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|F Chain F, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|L Chain L, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|S Chain S, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2EF6|A Chain A, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|B Chain B, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|C Chain C, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|D Chain D, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2P2K|A Chain A, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|B Chain B, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|C Chain C, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|D Chain D, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
Length = 237
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 8/111 (7%)
Query: 144 IVAIEFDTKKSYE-QDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYD--GQN 200
IVA+E DT + + D N H+G+D+ SV R + N+ NG + Y+ G+
Sbjct: 4 IVAVELDTYPNTDIGDPNYPHIGIDIKSV---RSKKTAKWNMQNGKVGTAHIIYNSVGKR 60
Query: 201 ITVFVA--NMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
++ V+ N ++ +S +DL LPE V VG SASTG + N + SW+F
Sbjct: 61 LSAVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSF 111
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 23 QVSSLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQL 80
+ ++LHF F F++ ++ L D +T +++T G+P + GRA++ +
Sbjct: 122 ETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHI 181
Query: 81 WRDNKNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
W + V A+F TF I + + P +G+AF I+ + +P S G+ LG+
Sbjct: 182 WESSA-VVASFDATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGL 232
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 26/220 (11%)
Query: 325 NKLGKGGFGTV--YKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGW 382
KLG+GGF V +G+ A+KR+ +Q ++E E H N+++L+ +
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 383 CYE----RHDFLLVYEYMPNGSLDKFI--FYDETNSGPGEVTLNWEKRLSVIHGTSQALD 436
C +H+ L+ + G+L I D+ N L ++ L ++ G + L+
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN------FLTEDQILWLLLGICRGLE 148
Query: 437 YLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFG---LARTIQENLKTHHSTKEIAG--- 490
+H K HRD+K +NI+L E L D G A E + + ++ A
Sbjct: 149 AIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 491 TPGYMAPESFLVGRATI---ETDIYAFGVLILEVACGRKP 527
T Y APE F V + TD+++ G ++ + G P
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 43/216 (19%)
Query: 327 LGKGGFGTVYKGIWRN--KEIAVKRVSETSRQGKQEFIA-----EVTTIGSLRHRNLVKL 379
+G G +G+V I + +++A+K++S R + E A E+ + ++H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLS---RPFQSEIFAKRAYRELLLLKHMQHENVIGL 106
Query: 380 I------GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQ 433
+ +DF LV +M L K + + + EK +++ +
Sbjct: 107 LDVFTPASSLRNFYDFYLVMPFM-QTDLQKIM----------GMEFSEEKIQYLVYQMLK 155
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAG--- 490
L Y+H+ V+HRD+K N+ ++ + ++ DFGLAR H+ E+ G
Sbjct: 156 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR---------HADAEMTGYVV 203
Query: 491 TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGR 525
T Y APE L +T DI++ G ++ E+ G+
Sbjct: 204 TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 75
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF----IFYDETNSGPGEVT---LNWEKRL 425
H+N++ L+ + P SL++F I + ++ +V L+ E+
Sbjct: 76 HKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 123
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 124 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMM 176
Query: 486 KEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGR 525
T Y APE L D+++ G ++ E+ C +
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 27/230 (11%)
Query: 327 LGKGGFGT--VYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+G G FG + + N+ +AVK + E + + E+ SLRH N+V+
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSG---PGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+V EY G L F N+G E +++ +S + Y H
Sbjct: 85 TPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLIS-------GVSYCH-- 131
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLG--DFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
+V HRD+K N +LD RL DFG +++ H K GTP Y+APE
Sbjct: 132 -AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS----SVLHSQPKSTVGTPAYIAPEV 186
Query: 500 FLVGRATIET-DIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELR 548
L + D+++ GV + + G P E+ +H + ++
Sbjct: 187 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ 236
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 318 TGNFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQ-GKQEFIAEVTTIGSLRHR 374
+ +F K+ LG+G +G V + + +A+K++ + + E+ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 375 NLVKLIGW----CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHG 430
N++ + +E + + + + + L + I L+ + I+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---------STQMLSDDHIQYFIYQ 120
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK-------THH 483
T +A+ LH + V+HRD+K SN++++S + ++ DFGLAR I E+
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 484 STKEIAGTPGYMAPESFLV-GRATIETDIYAFGVLILEVACGR 525
E T Y APE L + + D+++ G ++ E+ R
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 21/176 (11%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRN--KEIAVKRVSETSRQ--GKQEFIAEVTTIGSL 371
K N+ K+ +G+G +G VY +N K +A+K+V+ + + E+T + L
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 372 RHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGE-----VTLNWEKRLS 426
+ +++L HD ++ + + L +I + +S + + L + +
Sbjct: 85 KSDYIIRL-------HDLIIPEDLLKFDEL--YIVLEIADSDLKKLFKTPIFLTEQHVKT 135
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTH 482
+++ ++H E ++HRD+K +N +L+ + + ++ DFGLARTI + H
Sbjct: 136 ILYNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIH 188
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 318 TGNFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQ-GKQEFIAEVTTIGSLRHR 374
+ +F K+ LG+G +G V + + +A+K++ + + E+ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 375 NLVKLIGW----CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHG 430
N++ + +E + + + + + L + I L+ + I+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---------STQMLSDDHIQYFIYQ 120
Query: 431 TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK-------THH 483
T +A+ LH + V+HRD+K SN++++S + ++ DFGLAR I E+
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 484 STKEIAGTPGYMAPESFLV-GRATIETDIYAFGVLILEVACGR 525
E T Y APE L + + D+++ G ++ E+ R
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 81
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF----IFYDETNSGPGEVT---LNWEKRL 425
H+N++ L+ + P SL++F I + ++ +V L+ E+
Sbjct: 82 HKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMM 182
Query: 486 KEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGR 525
+ T Y APE L D+++ G ++ E+ C +
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 20/174 (11%)
Query: 359 QEFIAEVTTIGSLRHRNLVKLIGWCYERHD--FLLVYEYMPNGSLDKFIFYDETNSGPGE 416
++ E+ + L H N+VKL+ + ++ +V+E + G + + P
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV---------PTL 131
Query: 417 VTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQ 476
L+ ++ + ++YLH ++++HRDIK SN+++ + + ++ DFG++ +
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 477 ENLKTHHSTKEIAGTPGYMAPESFLVGRATIE---TDIYAFGVLILEVACGRKP 527
+ +T GTP +MAPES R D++A GV + G+ P
Sbjct: 189 GSDALLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 86
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF----IFYDETNSGPGEVT---LNWEKRL 425
H+N++ L+ + P SL++F I + ++ +V L+ E+
Sbjct: 87 HKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 134
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 135 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMM 187
Query: 486 KEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGR 525
T Y APE L D+++ G ++ E+ C +
Sbjct: 188 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 18/212 (8%)
Query: 327 LGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGK-QEFIAEVTTIGSLRHRNLVKLIGWC 383
+G+G +G V +A++++S Q Q + E+ + RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 384 YERHDFLLV--YEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+D + E M + + + + + L+ + ++ + L Y+H+
Sbjct: 91 ---NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+ VLHRD+K SN++L++ + ++ DFGLAR + E T Y APE L
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 502 VGRA-TIETDIYAFGVLILEVACGRK--PGNQ 530
+ T DI++ G ++ E+ R PG
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 320 NFNPKNKLGKGGFGTVY--KGIWRNKEIAVKRVSETSRQGKQ-EFIAEVTTIGSLRHRNL 376
+F+ +G+GGFG VY + K A+K + + + KQ E +A L R +
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA-------LNERIM 241
Query: 377 VKLI--GWCYERHDFLLVYEYMPNGSLDKFIF-YDETNSGPGEVTLNWEKRLSVIHGTSQ 433
+ L+ G C F++ Y + + DK F D N G L+ S
Sbjct: 242 LSLVSTGDC----PFIVCMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 296
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A L+++HN + V++RD+K +NI+LD + R+ D GLA + K H S
Sbjct: 297 AAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KPHASV-- 350
Query: 488 IAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRKPGNQ 530
GT GYMAPE G A + D ++ G ++ ++ G P Q
Sbjct: 351 --GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 392
>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|2LTN|C Chain C, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|1BQP|A Chain A, The Structure Of The Pea Lectin-D-Mannopyranose Complex
pdb|1BQP|C Chain C, The Structure Of The Pea Lectin-D-Mannopyranose Complex
pdb|1HKD|A Chain A, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
pdb|1HKD|C Chain C, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
Length = 181
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 65 ITNQSGRAIYKDQFQLW-RDNKNVKATFST--TFVLNILNQTAQPGEGLAFVIAGNKDLP 121
+ N GRA+Y +W R+ NV A F T TFV+N N + +G F IA P
Sbjct: 37 VKNTVGRALYSSPIHIWDRETGNV-ANFVTSFTFVINAPN-SYNVADGFTFFIAPVDTKP 94
Query: 122 ENSEGQWLGIVNGITNGTNQSQIVAIEFDT--KKSYEQDINDNHVGLDVNSVYSIRQVPL 179
+ + G +LG+ N +Q VA+EFDT +++ D H+G+DVN SI+ V
Sbjct: 95 Q-TGGGYLGVFNS-AEYDKTTQTVAVEFDTFYNAAWDPSNRDRHIGIDVN---SIKSVNT 149
Query: 180 TRVNLANGTDIKVQVRYDG 198
L NG + V + ++
Sbjct: 150 KSWKLQNGEEANVVIAFNA 168
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP Y
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEY 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+AP L D +A GVLI E+A G P
Sbjct: 205 LAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 320 NFNPKNKLGKGGFGTVY--KGIWRNKEIAVKRVSETSRQGKQ-EFIAEVTTIGSLRHRNL 376
+F+ +G+GGFG VY + K A+K + + + KQ E +A L R +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA-------LNERIM 242
Query: 377 VKLI--GWCYERHDFLLVYEYMPNGSLDKFIF-YDETNSGPGEVTLNWEKRLSVIHGTSQ 433
+ L+ G C F++ Y + + DK F D N G L+ S
Sbjct: 243 LSLVSTGDC----PFIVCMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A L+++HN + V++RD+K +NI+LD + R+ D GLA + K H S
Sbjct: 298 AAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KPHASV-- 351
Query: 488 IAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRKPGNQ 530
GT GYMAPE G A + D ++ G ++ ++ G P Q
Sbjct: 352 --GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 320 NFNPKNKLGKGGFGTVY--KGIWRNKEIAVKRVSETSRQGKQ-EFIAEVTTIGSLRHRNL 376
+F+ +G+GGFG VY + K A+K + + + KQ E +A L R +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA-------LNERIM 242
Query: 377 VKLI--GWCYERHDFLLVYEYMPNGSLDKFIF-YDETNSGPGEVTLNWEKRLSVIHGTSQ 433
+ L+ G C F++ Y + + DK F D N G L+ S
Sbjct: 243 LSLVSTGDC----PFIVCMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A L+++HN + V++RD+K +NI+LD + R+ D GLA + K H S
Sbjct: 298 AAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KPHASV-- 351
Query: 488 IAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRKPGNQ 530
GT GYMAPE G A + D ++ G ++ ++ G P Q
Sbjct: 352 --GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 320 NFNPKNKLGKGGFGTVY--KGIWRNKEIAVKRVSETSRQGKQ-EFIAEVTTIGSLRHRNL 376
+F+ +G+GGFG VY + K A+K + + + KQ E +A L R +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA-------LNERIM 242
Query: 377 VKLI--GWCYERHDFLLVYEYMPNGSLDKFIF-YDETNSGPGEVTLNWEKRLSVIHGTSQ 433
+ L+ G C F++ Y + + DK F D N G L+ S
Sbjct: 243 LSLVSTGDC----PFIVCMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 434 A------LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKE 487
A L+++HN + V++RD+K +NI+LD + R+ D GLA + K H S
Sbjct: 298 AAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KPHASV-- 351
Query: 488 IAGTPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRKPGNQ 530
GT GYMAPE G A + D ++ G ++ ++ G P Q
Sbjct: 352 --GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 27/230 (11%)
Query: 327 LGKGGFGT--VYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+G G FG + + N+ +AVK + E + E+ SLRH N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSG---PGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+V EY G L F N+G E +++ +S + Y H
Sbjct: 86 TPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLIS-------GVSYCH-- 132
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLG--DFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
+V HRD+K N +LD RL DFG +++ H K GTP Y+APE
Sbjct: 133 -AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS----SVLHSQPKSTVGTPAYIAPEV 187
Query: 500 FLVGRATIET-DIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELR 548
L + D+++ GV + + G P E+ +H + ++
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ 237
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 74
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI----------QMELDHERMSY 123
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 124 LLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA----GTSFMMT 176
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|1AZD|A Chain A, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|B Chain B, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|C Chain C, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|D Chain D, Concanavalin From Canavalia Brasiliensis
pdb|3JU9|A Chain A, Crystal Structure Of A Lectin From Canavalia Brasiliensis
Seed (conbr) Complexed With Alpha-aminobutyric Acid
pdb|4H55|A Chain A, Crystal Structure Of Canavalia Brasiliensis Seed Lectin
(Conbr) In Complex With Beta-D-Ribofuranose
Length = 237
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 144 IVAIEFDTKKSYEQDINDN---HVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYD--G 198
IVA+E DT DI D H+G+D+ SV S + + N+ NG + Y+ G
Sbjct: 4 IVAVELDTYP--NTDIGDPSYPHIGIDIKSVRSKKTA---KWNMQNGKVGTAHIIYNSVG 58
Query: 199 QNITVFVA--NMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
+ ++ V+ N ++ +S +DL LPE V VG SASTG + N + SW+F
Sbjct: 59 KRLSAVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSF 111
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 23 QVSSLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQL 80
+ ++LHF F F++ ++ L D +T + +++T G+P + GRA++ +
Sbjct: 122 ETNALHFMFNQFSKDQKDLILQGDATTGTEGNLRLTRVSSNGSPQGSSVGRALFYAPVHI 181
Query: 81 WRDNKNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
W ++ V A+F TF I + + P +G+AF I+ + +P S G+ LG+
Sbjct: 182 W-ESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGL 232
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 81
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI----------QMELDHERMSY 130
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 131 LLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA----GTSFMMT 183
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 123/303 (40%), Gaps = 59/303 (19%)
Query: 327 LGKGGFGTVYKGIWRN---------KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLV 377
LG+G F ++KG+ R E+ +K + + R + F + + L H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G C+ + +LV E++ GSLD ++ + + W +L V + A+ +
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYL-----KKNKNCINILW--KLEVAKQLAWAMHF 128
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
L E ++H ++ + NI+L E E+ KT G P ++
Sbjct: 129 L---EENTLIHGNVCAKNILLIRE---------------EDRKT--------GNPPFIKL 162
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGN---QSEQNSYNNSIVHWLWELRRKG-RI 553
+ + DI + + C P N +++ S+ + LWE+ G +
Sbjct: 163 SDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTT----LWEICSGGDKP 218
Query: 554 LDAADSRLGGEFSE--------KEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADPP 605
L A DS+ +F E K E ++ C P RPS + +++ L+ P
Sbjct: 219 LSALDSQRKLQFYEDRHQLPAPKAAELANLIN-NCMDYEPDHRPSFRAIIRDLNSLFTPD 277
Query: 606 VLP 608
++P
Sbjct: 278 LVP 280
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
Query: 433 QALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTP 492
+AL YL + V+HRD+K SNI+LD +L DFG++ + ++ S AG
Sbjct: 135 KALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS----AGCA 188
Query: 493 GYMAPESFLVGRAT-----IETDIYAFGVLILEVACGRKP 527
YMAPE T I D+++ G+ ++E+A G+ P
Sbjct: 189 AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 95/237 (40%), Gaps = 32/237 (13%)
Query: 306 PKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEV 365
P ++K+++ +F +G+G FG V +N + +V K E +
Sbjct: 61 PFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNAD----KVFAMKILNKWEMLKRA 116
Query: 366 TTIGSLRHRNLVKLIG---WCYERH-------DFLLVYEYMPNGSLDKFIFYDETNSGPG 415
T R V + G W H + LV +Y G L + E + P
Sbjct: 117 ET-ACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFE-DRLPE 174
Query: 416 EVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI 475
E+ + + + A+D +H + +HRDIK NI++D + RL DFG +
Sbjct: 175 EMARFYLAEMVI------AIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL 225
Query: 476 QENLKTHHSTKEIAGTPGYMAPESFLV-----GRATIETDIYAFGVLILEVACGRKP 527
E+ S GTP Y++PE GR E D ++ GV + E+ G P
Sbjct: 226 MEDGTVQSSVA--VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 27/230 (11%)
Query: 327 LGKGGFGT--VYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+G G FG + + N+ +AVK + E + + E+ SLRH N+V+
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSG---PGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+V EY G L F N+G E +++ +S + Y H
Sbjct: 86 TPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLIS-------GVSYAH-- 132
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARL--GDFGLARTIQENLKTHHSTKEIAGTPGYMAPES 499
+V HRD+K N +LD RL DFG ++ H K GTP Y+APE
Sbjct: 133 -AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA----SVLHSQPKSAVGTPAYIAPEV 187
Query: 500 FLVGRATIET-DIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELR 548
L + D+++ GV + + G P E+ +H + ++
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ 237
>pdb|2OW4|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Conm) In Complex With Man1-2man-Ome
Length = 237
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 144 IVAIEFDTKKSYEQDINDN---HVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYD--G 198
IVA+E DT DI D H+G+D+ SV R + N+ NG + Y+ G
Sbjct: 4 IVAVELDTYP--NTDIGDPSYPHIGIDIKSV---RSKKTAKWNMQNGKVGTAHIIYNSVG 58
Query: 199 QNITVFVA--NMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
+ ++ V+ N ++ +S +DL LPE V VG SASTG + N + SW+F
Sbjct: 59 KRLSAVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSF 111
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 23 QVSSLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQL 80
+ ++LHF+F F++ ++ L D +T +++T G+P + GRA++ +
Sbjct: 122 ETNALHFSFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHI 181
Query: 81 WRDNKNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
W ++ V A+F TF I + + P +G+AF I+ + +P S G+ LG+
Sbjct: 182 W-ESSAVVASFDATFTFLIKSSDSHPADGIAFFISNIDSSIPSGSTGRLLGL 232
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVN 81
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D +V E M + +L + I ++ L+ E+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI----------QMELDHERMSY 130
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 131 LLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMT 183
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACG 524
T Y APE L DI++ GV++ E+ G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVN 81
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI----------QMELDHERMSY 130
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 131 LLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA----GTSFMMT 183
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2CWM|A Chain A, Native Crystal Structure Of No Releasing Inductive Lectin
From Seeds Of The Canavalia Maritima (Conm)
pdb|2CWM|D Chain D, Native Crystal Structure Of No Releasing Inductive Lectin
From Seeds Of The Canavalia Maritima (Conm)
pdb|2CY6|A Chain A, Crystal Structure Of Conm In Complex With Trehalose And
Maltose
pdb|2CY6|D Chain D, Crystal Structure Of Conm In Complex With Trehalose And
Maltose
pdb|2CYF|A Chain A, The Crystal Structure Of Canavalia Maritima Lectin (Conm)
In Complex With Trehalose And Maltose
pdb|2CYF|C Chain C, The Crystal Structure Of Canavalia Maritima Lectin (Conm)
In Complex With Trehalose And Maltose
pdb|2P37|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|B Chain B, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|C Chain C, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|D Chain D, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P34|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|B Chain B, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|C Chain C, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|D Chain D, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|3SNM|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds Complexed With Indole-3-Acetic Acid
pdb|4I30|A Chain A, Crystal Structure Of Canavalia Maritima Seeds Lectin
(Conm) Co- Crystalized With Gamma-Aminobutyric Acid
(Gaba) And Soaked With Adenine
Length = 237
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 144 IVAIEFDTKKSYEQDINDN---HVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYD--G 198
IVA+E DT DI D H+G+D+ SV R + N+ NG + Y+ G
Sbjct: 4 IVAVELDTYP--NTDIGDPSYPHIGIDIKSV---RSKKTAKWNMQNGKVGTAHIIYNSVG 58
Query: 199 QNITVFVA--NMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
+ ++ V+ N ++ +S +DL LPE V VG SASTG + N + SW+F
Sbjct: 59 KRLSAVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSF 111
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 23 QVSSLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQL 80
+ ++LHF F F++ ++ L D +T +++T G+P + GRA++ +
Sbjct: 122 ETNALHFVFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHI 181
Query: 81 WRDNKNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
W + V A+F TF I + + P +G+AF I+ + +P S G+ LG+
Sbjct: 182 WESSA-VVASFDATFTFLIKSSDSHPADGIAFFISNIDSSIPSGSTGRLLGL 232
>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|C Chain C, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|E Chain E, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|G Chain G, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOB|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|C Chain C, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|E Chain E, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|G Chain G, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOC|A Chain A, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|C Chain C, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|E Chain E, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|G Chain G, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|A Chain A, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|C Chain C, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|E Chain E, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|G Chain G, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOE|A Chain A, X-Ray Crystal Structure Determination And Refinement At
1.9 Angstroms Resolution Of Isolectin I From The Seeds
Of Lathyrus Ochrus
pdb|1LOE|C Chain C, X-Ray Crystal Structure Determination And Refinement At
1.9 Angstroms Resolution Of Isolectin I From The Seeds
Of Lathyrus Ochrus
pdb|1LOF|A Chain A, X-Ray Structure Of A Biantennary Octasaccharide-Lectin
Complex At 2.3 Angstroms Resolution
pdb|1LOG|A Chain A, X-Ray Structure Of A
(Alpha-Man(1-3)beta-Man(1-4)glcnac)-Lectin Complex At
2.1 Angstroms Resolution
pdb|1LOG|C Chain C, X-Ray Structure Of A
(Alpha-Man(1-3)beta-Man(1-4)glcnac)-Lectin Complex At
2.1 Angstroms Resolution
Length = 181
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 65 ITNQSGRAIYKDQFQLWRDNKNVKATFST--TFVLNILNQTAQPGEGLAFVIAGNKDLPE 122
+ N GRA+Y +W A F T TFV++ N + +G F IA P+
Sbjct: 37 VRNTVGRALYSSPIHIWDSKTGNVANFVTSFTFVIDAPN-SYNVADGFTFFIAPVDTKPQ 95
Query: 123 NSEGQWLGIVNGITNGTNQSQIVAIEFDT--KKSYEQDINDNHVGLDVNSVYSIRQVPLT 180
+ G +LG+ N + SQ VA+EFDT +++ D H+G+DVNS+ SI
Sbjct: 96 -TGGGYLGVFNS-KDYDKTSQTVAVEFDTFYNTAWDPSNGDRHIGIDVNSIKSINTKSWA 153
Query: 181 RVNLANGTDIKVQVRYDG 198
L NG + V + ++
Sbjct: 154 ---LQNGKEANVVIAFNA 168
>pdb|2OVU|A Chain A, Crystal Strucure Of A Lectin From Canavalia Gladiata (Cgl)
In Complex With Man1-2man-Ome
Length = 237
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 144 IVAIEFDTKKSYEQDINDN---HVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYD--G 198
IVA+E DT DI D H+G+D+ SV S + + N+ NG + Y+ G
Sbjct: 4 IVAVELDTYP--NTDIGDPDYPHIGIDIKSVRSKKTA---KWNMQNGKVGTAHIIYNSVG 58
Query: 199 QNITVFVA--NMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
+ ++ V+ N ++ +S +DL LPE V VG SASTG + N + SW+F
Sbjct: 59 KRLSAVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSF 111
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 23 QVSSLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQL 80
+ ++LHF F F++ ++ L D +T +++T G+P + GRA++ +
Sbjct: 122 ETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHI 181
Query: 81 WRDNKNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
W ++ V A+F TF I + + P +G+AF I+ + +P S G+ LG+
Sbjct: 182 W-ESSAVVASFDATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGL 232
>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin
Complex At 2.3 Angstroms Resolution
Length = 181
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 65 ITNQSGRAIYKDQFQLWRDNKNVKATFST--TFVLNILNQTAQPGEGLAFVIAGNKDLPE 122
+ N GRA+Y +W A F T TFV++ N + +G F IA P+
Sbjct: 37 VRNTVGRALYSSPIHIWDSKTGNVANFVTSFTFVIDAPN-SYNVADGFTFFIAPVDTKPQ 95
Query: 123 NSEGQWLGIVNGITNGTNQSQIVAIEFDT--KKSYEQDINDNHVGLDVNSVYSIRQVPLT 180
+ G +LG+ N + SQ VA+EFDT +++ D H+G+DVNS+ SI
Sbjct: 96 -TGGGYLGVFNS-KDYDKTSQTVAVEFDTFYNTAWDPSNGDRHIGIDVNSIKSINTKSW- 152
Query: 181 RVNLANGTDIKVQVRYDG 198
L NG + V + ++
Sbjct: 153 --KLQNGKEANVVIAFNA 168
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 324 KNKLGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLR-HRNLVKLI 380
++ LG+G V I ++E AVK + + + EV + + HRN+++LI
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ E F LV+E M GS+ I N + V+ + ALD+LHN
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRR--------HFNELEASVVVQDVASALDFLHN 129
Query: 441 GSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHH-STKEI---AGTPG 493
K + HRD+K NI+ + ++ DFGL I+ N ST E+ G+
Sbjct: 130 ---KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAE 186
Query: 494 YMAPESF--LVGRATI---ETDIYAFGVLILEVACGRKP 527
YMAPE A+I D+++ GV++ + G P
Sbjct: 187 YMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 27/195 (13%)
Query: 408 DETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLG 467
+E + G + + E +S ++ +++L S ++ +HRD+ + NI+L ++
Sbjct: 185 EEDSDGFYKEPITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKIC 241
Query: 468 DFGLARTIQENLKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV---AC 523
DFGLAR I +N + K P +MAPES + ++D++++GVL+ E+
Sbjct: 242 DFGLARDIYKN--PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGG 299
Query: 524 GRKPGNQSEQNSYNNSIVHWLWELRRKGRILDAADSRLGGEFSEKEMECVLILGLACCHP 583
PG Q +++ + R+G + A E+S E+ ++ L C H
Sbjct: 300 SPYPGVQMDEDFCSR---------LREGMRMRAP------EYSTPEIYQIM---LDCWHR 341
Query: 584 NPHLRPSMKTVLQVL 598
+P RP +++ L
Sbjct: 342 DPKERPRFAELVEKL 356
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 119
Query: 373 HRNLVKLIG------WCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI----------QMELDHERMSY 168
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 169 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 221
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVN 81
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D +V E M + +L + I ++ L+ E+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI----------QMELDHERMSY 130
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 131 LLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMT 183
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACG 524
T Y APE L DI++ GV++ E+ G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 29/218 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 81
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D +V E M + +L + I ++ L+ E+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI----------QMELDHERMSY 130
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART + T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM---TP 184
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACG 524
E+ T Y APE L DI++ G ++ E+ G
Sbjct: 185 EVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
L E + ++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+ K A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 254 --PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 295
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
L E + ++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+ K A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 247 --PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 288
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
L E + ++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+ K A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 252 --PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 293
>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
pdb|1RIN|C Chain C, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
Length = 180
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 65 ITNQSGRAIYKDQFQLW-RDNKNVKATFST--TFVLNILNQTAQPGEGLAFVIAGNKDLP 121
+ N GRA+Y +W R+ NV A F T TFV+N N + +G F IA P
Sbjct: 37 VKNTVGRALYSSPIHIWDRETGNV-ANFVTSFTFVINAPN-SYNVADGFTFFIAPVDTKP 94
Query: 122 ENSEGQWLGIVNGITNGTNQSQIVAIEFDT--KKSYEQDINDNHVGLDVNSVYSIRQVPL 179
+ + G +LG+ N ++ VA+EFDT +++ D H+G+DVN SI+ V
Sbjct: 95 Q-TGGGYLGVFNS-AEYDKTTETVAVEFDTFYNAAWDPSNRDRHIGIDVN---SIKSVNT 149
Query: 180 TRVNLANGTDIKVQVRYDG 198
L NG + V + ++
Sbjct: 150 KSWKLQNGEEANVVIAFNA 168
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 81
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI----------QMELDHERMSY 130
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 183
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 419 LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQEN 478
L E + ++ +++L + ++ +HRD+ + NI+L + ++ DFGLAR I ++
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 479 LKTHHSTKEIAGTP-GYMAPESFLVGRATIETDIYAFGVLILEV 521
+ K A P +MAPE+ TI++D+++FGVL+ E+
Sbjct: 245 --PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 286
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 38/219 (17%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSE--TSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
+G G +G+V Y R K +AVK++S S + E+ + L+H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 382 WCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRLS------VIHGTSQ 433
+ P S++ F ++ T G + + LS +++ +
Sbjct: 95 V------------FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLR 142
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L Y+H+ ++HRD+K SN+ ++ + R+ DFGLAR E + + +T+
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR------W 193
Query: 494 YMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
Y APE L +T DI++ G ++ E+ G+ PG+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 81
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI----------QMELDHERMSY 130
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 183
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 435 LDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
+YLH+ +++RD+K N+++D + ++ DFG A+ ++ T + GTP
Sbjct: 154 FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEA 204
Query: 495 MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+APE L D +A GVLI E+A G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 47/239 (19%)
Query: 321 FNPKNKLGKGGFGTVYKG-----IWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRN 375
F ++K+G+G F +VY + ++IA+K + TS + AE+ + ++
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIR--IAAELQCLTVAGGQD 80
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQAL 435
V + +C+ ++D +++ MP L+ F D NS L++++ + +AL
Sbjct: 81 NVMGVKYCFRKNDHVVIA--MPY--LEHESFLDILNS------LSFQEVREYMLNLFKAL 130
Query: 436 DYLHNGSEKRVLHRDIKSSNIMLDSEFNA-RLGDFGLARTIQEN---------------- 478
+H ++HRD+K SN + + L DFGLA+ +
Sbjct: 131 KRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQER 187
Query: 479 ---------LKTHHSTKEIAGTPGYMAPESFL-VGRATIETDIYAFGVLILEVACGRKP 527
L AGTPG+ APE T D+++ GV+ L + GR P
Sbjct: 188 CSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 82
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 83 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI----------QMELDHERMSY 131
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 132 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 184
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 75
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 76 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI----------QMELDHERMSY 124
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 125 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 177
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 82
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 83 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI----------QMELDHERMSY 131
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 132 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 184
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 80
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 81 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI----------QMELDHERMSY 129
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 130 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 182
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 183 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 74
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI----------QMELDHERMSY 123
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 124 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 176
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 119
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI----------QMELDHERMSY 168
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 169 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 221
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 75
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 76 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI----------QMELDHERMSY 124
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 125 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 177
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 38/219 (17%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSE--TSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
+G G +G+V Y R K +AVK++S S + E+ + L+H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 86
Query: 382 WCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRLS------VIHGTSQ 433
+ P S++ F ++ T G + + LS +++ +
Sbjct: 87 ------------VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR 134
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L Y+H+ ++HRD+K SN+ ++ + R+ DFGLAR E + + +T+
Sbjct: 135 GLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR------W 185
Query: 494 YMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
Y APE L +T DI++ G ++ E+ G+ PG+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 224
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 122/303 (40%), Gaps = 59/303 (19%)
Query: 327 LGKGGFGTVYKGIWRN---------KEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLV 377
LG+G F ++KG+ R E+ +K + + R + F + + L H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 378 KLIGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDY 437
G C + +LV E++ GSLD ++ + + W +L V + A+ +
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYL-----KKNKNCINILW--KLEVAKQLAAAMHF 128
Query: 438 LHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAP 497
L E ++H ++ + NI+L E E+ KT G P ++
Sbjct: 129 L---EENTLIHGNVCAKNILLIRE---------------EDRKT--------GNPPFIKL 162
Query: 498 ESFLVGRATIETDIYAFGVLILEVACGRKPGN---QSEQNSYNNSIVHWLWELRRKG-RI 553
+ + DI + + C P N +++ S+ + LWE+ G +
Sbjct: 163 SDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTT----LWEICSGGDKP 218
Query: 554 LDAADSRLGGEFSE--------KEMECVLILGLACCHPNPHLRPSMKTVLQVLSGEADPP 605
L A DS+ +F E K E ++ C P RPS + +++ L+ P
Sbjct: 219 LSALDSQRKLQFYEDRHQLPAPKAAELANLIN-NCMDYEPDHRPSFRAIIRDLNSLFTPD 277
Query: 606 VLP 608
++P
Sbjct: 278 LVP 280
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 91/228 (39%), Gaps = 23/228 (10%)
Query: 327 LGKGGFGT--VYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+G G FG + + N+ +AVK + E + + E+ SLRH N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSG---PGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+V EY G L F N+G E +++ +S + Y H
Sbjct: 86 TPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLIS-------GVSYCH-- 132
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+V HRD+K N +LD RL + L H K+ GTP Y+APE L
Sbjct: 133 -AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVL--HSQPKDTVGTPAYIAPEVLL 189
Query: 502 VGRATIET-DIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELR 548
+ D+++ GV + + G P E+ +H + ++
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ 237
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVN 81
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI----------QMELDHERMSY 130
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA----GTSFMMT 183
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3
Angstroms Resolution Of The Lentil Lectin
pdb|2LAL|C Chain C, Crystal Structure Determination And Refinement At 2.3
Angstroms Resolution Of The Lentil Lectin
pdb|1LEM|A Chain A, The Monosaccharide Binding Site Of Lentil Lectin: An X-Ray
And Molecular Modelling Study
pdb|1LEN|A Chain A, Refinement Of Two Crystal Forms Of Lentil Lectin At 1.8
Angstroms Resolution
pdb|1LEN|C Chain C, Refinement Of Two Crystal Forms Of Lentil Lectin At 1.8
Angstroms Resolution
pdb|1LES|A Chain A, Lentil Lectin Complexed With Sucrose
pdb|1LES|C Chain C, Lentil Lectin Complexed With Sucrose
Length = 181
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 70 GRAIYKDQFQLW-RDNKNVKATFSTTFVLNI-LNQTAQPGEGLAFVIAGNKDLPENSEGQ 127
GRA+Y +W RD NV A F T+F I + +G F IA P+ + G
Sbjct: 42 GRALYSTPIHIWDRDTGNV-ANFVTSFTFVIDAPSSYNVADGFTFFIAPVDTKPQ-TGGG 99
Query: 128 WLGIVNGITNGTNQSQIVAIEFDT--KKSYEQDINDNHVGLDVNSVYSIRQVPLTRVNLA 185
+LG+ N SQ VA+EFDT +++ + H+G+DVN SI+ V NL
Sbjct: 100 YLGVFNS-KEYDKTSQTVAVEFDTFYNAAWDPSNKERHIGIDVN---SIKSVNTKSWNLQ 155
Query: 186 NGTDIKVQVRYDGQNITVFVANMETPLLSEP 216
NG V + ++ N+ T L+ P
Sbjct: 156 NGERANVVIAFNA------ATNVLTVTLTYP 180
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 46/259 (17%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVK--------RVSETSRQGKQEFI 362
L EL+K ++ K +G+G +G V I N+ A++ ++ + + + +
Sbjct: 21 LLELQKK---YHLKGAIGQGSYGVVRVAI-ENQTRAIRAIKIMNKNKIRQINPKDVERIK 76
Query: 363 AEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSL-DKFIFYDETNSGPGEVTL-- 419
EV + L H N+ +L + LV E G L DK + + ++G + +
Sbjct: 77 TEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVK 136
Query: 420 ---------NWEKRLSVIHGTSQALDY-----------------LHNGSEKRVLHRDIKS 453
N E IHG ++LD+ LH + + HRDIK
Sbjct: 137 TQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKP 196
Query: 454 SNIML--DSEFNARLGDFGLARTIQE-NLKTHHSTKEIAGTPGYMAPESFLVGRATI--E 508
N + + F +L DFGL++ + N ++ AGTP ++APE + +
Sbjct: 197 ENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256
Query: 509 TDIYAFGVLILEVACGRKP 527
D ++ GVL+ + G P
Sbjct: 257 CDAWSAGVLLHLLLMGAVP 275
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 81
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKFI-------FYDETNSGPGEVTLNWEKRL 425
H+N++ L+ + P SL++F D S ++ L+ E+
Sbjct: 82 HKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMM 182
Query: 486 KEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACG 524
T Y APE L DI++ G ++ E+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 30/231 (12%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGS 370
+KE++ +F +G+G FG V +N E R+ K E + T
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTE----RIYAMKILNKWEMLKRAETACF 137
Query: 371 LRHRNL--------VKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNW 421
R++ + + + ++ + L LV +Y G L + E L
Sbjct: 138 REERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL-------SKFEDKLPE 190
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKT 481
+ I A+D +H + +HRDIK N++LD + RL DFG + ++
Sbjct: 191 DMARFYIGEMVLAIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV 247
Query: 482 HHSTKEIAGTPGYMAPESFL-----VGRATIETDIYAFGVLILEVACGRKP 527
S GTP Y++PE +G+ E D ++ GV + E+ G P
Sbjct: 248 QSSVA--VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 30/231 (12%)
Query: 311 LKELKKATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGS 370
+KE++ +F +G+G FG V +N E R+ K E + T
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTE----RIYAMKILNKWEMLKRAETACF 121
Query: 371 LRHRNL--------VKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNW 421
R++ + + + ++ + L LV +Y G L + E L
Sbjct: 122 REERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL-------SKFEDKLPE 174
Query: 422 EKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKT 481
+ I A+D +H + +HRDIK N++LD + RL DFG + ++
Sbjct: 175 DMARFYIGEMVLAIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV 231
Query: 482 HHSTKEIAGTPGYMAPESFL-----VGRATIETDIYAFGVLILEVACGRKP 527
S GTP Y++PE +G+ E D ++ GV + E+ G P
Sbjct: 232 QSSVA--VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 326 KLGKGGFGTVYKGIWRNKE----IAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKL-- 379
K+G+G +G VYK ++ + A+K++ T E+ + L+H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS--MSACREIALLRELKHPNVISLQK 85
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
+ + L+++Y + F+ + + V L S+++ + YLH
Sbjct: 86 VFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNAR----LGDFGLARTIQENLKTHHSTKEIAGTPGYM 495
VLHRD+K +NI++ E R + D G AR LK + T Y
Sbjct: 146 ANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYR 202
Query: 496 APESFLVGRA-TIETDIYAFGVLILEV 521
APE L R T DI+A G + E+
Sbjct: 203 APELLLGARHYTKAIDIWAIGCIFAEL 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 38/219 (17%)
Query: 327 LGKGGFGTV---YKGIWRNKEIAVKRVSE--TSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
+G G +G+V Y R K +AVK++S S + E+ + L+H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 382 WCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRLS------VIHGTSQ 433
+ P S++ F ++ T G + + LS +++ +
Sbjct: 95 V------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR 142
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPG 493
L Y+H+ ++HRD+K SN+ ++ + R+ DFGLAR E + + +T+
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR------W 193
Query: 494 YMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
Y APE L +T DI++ G ++ E+ G+ PG+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 327 LGKGGFGTVYKG-IWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYE 385
+G G FG V++ + + E+A+K+V + R +E ++ I ++H N+V L + Y
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNREL--QIMRI--VKHPNVVDLKAFFYS 103
Query: 386 RHD-----FL-LVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
D FL LV EY+P Y + + + ++ ++L Y+H
Sbjct: 104 NGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKL-----YMYQLLRSLAYIH 158
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNA-RLGDFGLARTIQENLKTHHSTKEIAGTPG----- 493
+ + HRDIK N++LD +L DFG A+ + IAG P
Sbjct: 159 SIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL------------IAGEPNVSXIC 203
Query: 494 ---YMAPE-SFLVGRATIETDIYAFGVLILEVACGR 525
Y APE F T DI++ G ++ E+ G+
Sbjct: 204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2YZ4|A Chain A, The Neutron Structure Of Concanavalin A At 2.2 Angstroms
Length = 237
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 144 IVAIEFDTKKSYEQDINDN---HVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQN 200
IVA+E DT + DI D H+G+D+ SV R + N+ NG + Y+ +
Sbjct: 4 IVAVELDTYPN--TDIGDPSYPHIGIDIKSV---RSKKTAKWNMQNGKVGTAHIIYNSVD 58
Query: 201 ----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
V N ++ +S +DL LPE V VG SASTG + N + SW+F
Sbjct: 59 KRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSF 111
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 23 QVSSLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQL 80
+ ++LHF F F++ ++ L D +T +++T G+P + GRA++ +
Sbjct: 122 ETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHI 181
Query: 81 WRDNKNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
W ++ V A+F TF I + + P +G+AF I+ + +P S G+ LG+
Sbjct: 182 W-ESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGL 232
>pdb|2CTV|A Chain A, High Resolution Crystallographic Studies Of Native
Concanavalin A Using Rapid Laue Data Collection Methods
And The Introduction Of A Monochromatic Large-Angle
Oscillation Technique (Lot)
pdb|1CON|A Chain A, The Refined Structure Of Cadmium Substituted Concanavalin
A At 2.0 Angstroms Resolution
pdb|5CNA|A Chain A, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|B Chain B, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|C Chain C, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|D Chain D, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|1APN|A Chain A, The Crystallographic Structure Of Metal-Free Concanavalin
A At 2.5 Angstroms Resolution
pdb|1APN|B Chain B, The Crystallographic Structure Of Metal-Free Concanavalin
A At 2.5 Angstroms Resolution
pdb|1CVN|A Chain A, Concanavalin A Complexed To Trimannoside
pdb|1CVN|B Chain B, Concanavalin A Complexed To Trimannoside
pdb|1CVN|C Chain C, Concanavalin A Complexed To Trimannoside
pdb|1CVN|D Chain D, Concanavalin A Complexed To Trimannoside
pdb|1ENS|A Chain A, Crystals Of Demetallized Concanavalin A Soaked With Cobalt
Having A Cobalt Ion Bound In The S1 Site
pdb|1ENS|B Chain B, Crystals Of Demetallized Concanavalin A Soaked With Cobalt
Having A Cobalt Ion Bound In The S1 Site
pdb|1ENQ|A Chain A, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|B Chain B, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|C Chain C, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|D Chain D, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1CES|A Chain A, Crystals Of Demetallized Concanavalin A Soaked With Zinc
Have A Zinc Ion Bound In The S1 Site
pdb|1CES|B Chain B, Crystals Of Demetallized Concanavalin A Soaked With Zinc
Have A Zinc Ion Bound In The S1 Site
pdb|1VAL|A Chain A, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|B Chain B, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|C Chain C, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|D Chain D, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAM|A Chain A, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|B Chain B, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|C Chain C, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|D Chain D, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VLN|A Chain A, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|B Chain B, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|C Chain C, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|D Chain D, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|E Chain E, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|F Chain F, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|G Chain G, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|H Chain H, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1GIC|A Chain A, Concanavalin A Complexed With Methyl
Alpha-d-glucopyranoside
pdb|1GIC|B Chain B, Concanavalin A Complexed With Methyl
Alpha-d-glucopyranoside
pdb|1TEI|A Chain A, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|B Chain B, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|C Chain C, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|D Chain D, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|E Chain E, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|F Chain F, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|G Chain G, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|H Chain H, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1ONA|A Chain A, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|B Chain B, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|C Chain C, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|D Chain D, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1CJP|A Chain A, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|B Chain B, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|C Chain C, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|D Chain D, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1BXH|A Chain A, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|B Chain B, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|C Chain C, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|D Chain D, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1QGL|A Chain A, Room Temperature Structure Of Concanavalin A Complexed To
Bivalent Ligand
pdb|1QGL|B Chain B, Room Temperature Structure Of Concanavalin A Complexed To
Bivalent Ligand
pdb|1QDC|A Chain A, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|B Chain B, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|C Chain C, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|D Chain D, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|A Chain A, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|B Chain B, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|C Chain C, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|D Chain D, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1DQ0|A Chain A, Locked, Metal-Free Concanavalin A, A Minor Species In
Solution
pdb|1DQ1|A Chain A, Calcium;calcium Concanavalin A
pdb|1DQ2|A Chain A, Unlocked Metal-Free Concanavalin A
pdb|1DQ2|B Chain B, Unlocked Metal-Free Concanavalin A
pdb|1DQ4|A Chain A, A Transient Unlocked Concanavalin A Structure With Mn2+
Bound In The Transition Metal Ion Binding Site S1 And An
Empty Calcium Binding Site S2
pdb|1DQ4|B Chain B, A Transient Unlocked Concanavalin A Structure With Mn2+
Bound In The Transition Metal Ion Binding Site S1 And An
Empty Calcium Binding Site S2
pdb|1DQ5|A Chain A, Manganese;manganese Concanavalin A At Ph 5.0
pdb|1DQ6|A Chain A, Manganese;manganese Concanavalin A At Ph 7.0
pdb|1QNY|A Chain A, X-Ray Refinement Of D2o Soaked Crystal Of Concanavalin A
pdb|1C57|A Chain A, Direct Determination Of The Positions Of Deuterium Atoms
Of Bound Water In Concanavalin A By Neutron Laue
Crystallography
pdb|3ENR|A Chain A, Zinc-Calcium Concanavalin A At Ph 6.15
pdb|3ENR|B Chain B, Zinc-Calcium Concanavalin A At Ph 6.15
pdb|1I3H|A Chain A, Concanavalin A-Dimannose Structure
pdb|1GKB|A Chain A, Concanavalin A, New Crystal Form
pdb|1GKB|B Chain B, Concanavalin A, New Crystal Form
pdb|1JW6|A Chain A, Crystal Structure Of The Complex Of Concanavalin A And
Hexapeptide
pdb|1JOJ|A Chain A, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|B Chain B, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|C Chain C, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|D Chain D, Concanavalin A-Hexapeptide Complex
pdb|1JUI|A Chain A, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|B Chain B, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|C Chain C, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|D Chain D, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JYC|A Chain A, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|B Chain B, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|C Chain C, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|D Chain D, Concanavalin A15-Mer Peptide Complex
pdb|1JYI|A Chain A, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|B Chain B, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|C Chain C, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|D Chain D, Concanavalin A/12-mer Peptide Complex
pdb|1JN2|P Chain P, Crystal Structure Of Meso-Tetrasulphonatophenyl Porphyrin
Complexed With Concanavalin A
pdb|1HQW|A Chain A, Crystal Structure Of The Complex Of Concanavalin A With A
Tripeptide Ypy
pdb|1NXD|1 Chain 1, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|2 Chain 2, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|3 Chain 3, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|4 Chain 4, Crystal Structure Of Mnmn Concanavalin A
pdb|1XQN|A Chain A, The 15k Neutron Structure Of Saccharide-Free Concanavalin
A
pdb|2A7A|A Chain A, On The Routine Use Of Soft X-Rays In Macromolecular
Crystallography, Part Iii- The Optimal Data Collection
Wavelength
pdb|2G4I|A Chain A, Anomalous Substructure Of Concanavalin A
pdb|1ENR|A Chain A, Co-Crystals Of Demetallized Concanavalin A With Zinc And
Calcium Having A Zinc Ion Bound In The S1 Site And A
Calcium Ion Bound In The S2 Site
pdb|1JBC|A Chain A, Concanavalin A
pdb|1NLS|A Chain A, Concanavalin A And Its Bound Solvent At 0.94a Resolution
pdb|1SCR|A Chain A, High-Resolution Structures Of Single-Metal-Substituted
Concanavalin A: The Co,Ca-Protein At 1.6 Angstroms And
The Ni,Ca-Protein At 2.0 Angstroms
pdb|1SCS|A Chain A, High-Resolution Structures Of Single-Metal-Substituted
Concanavalin A: The Co,Ca-Protein At 1.6 Angstroms And
The Ni,Ca-Protein At 2.0 Angstroms
pdb|2ENR|A Chain A, Co-crystals Of Demetallized Concanavalin A With Cadmium
Having A Cadmium Ion Bound In Both The S1 Site And The
S2 Site
pdb|2UU8|A Chain A, X-Ray Structure Of Ni, Ca Concanavalin A At Ultra-High
Resolution (0.94a)
pdb|3D4K|A Chain A, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|B Chain B, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|C Chain C, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|D Chain D, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3NWK|A Chain A, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|B Chain B, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|C Chain C, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|D Chain D, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3QLQ|A Chain A, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|B Chain B, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|C Chain C, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|D Chain D, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
Length = 237
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 144 IVAIEFDTKKSYEQDINDN---HVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQN 200
IVA+E DT DI D H+G+D+ SV R + N+ NG + Y+ +
Sbjct: 4 IVAVELDTYP--NTDIGDPSYPHIGIDIKSV---RSKKTAKWNMQNGKVGTAHIIYNSVD 58
Query: 201 ----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
V N ++ +S +DL LPE V VG SASTG + N + SW+F
Sbjct: 59 KRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSF 111
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 23 QVSSLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQL 80
+ ++LHF F F++ ++ L D +T +++T G+P + GRA++ +
Sbjct: 122 ETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHI 181
Query: 81 WRDNKNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
W ++ V A+F TF I + + P +G+AF I+ + +P S G+ LG+
Sbjct: 182 W-ESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGL 232
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 81
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D +V E M + +L + I ++ L+ E+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI----------QMELDHERMSY 130
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMT 183
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACG 524
T Y APE L DI++ G ++ E+ G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y + ++ +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVN 81
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D LV E M + +L + I ++ L+ E+
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI----------QMELDHERMSY 130
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA----GTSFMMT 183
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVA 522
T Y APE L DI++ G ++ E+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEF-NA--RLGDFGLARTIQENLKTHH 483
++ +A+ YLH+ + + HRD+K N++ S+ NA +L DFG A+ +H+
Sbjct: 120 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 172
Query: 484 STKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
S E TP Y+APE + D+++ GV++ + CG P
Sbjct: 173 SLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 28/189 (14%)
Query: 345 IAVKRVS---ETSRQGKQEFIAEVTTIGSLRHRNLVKLIGW------CYERHDFLLVYEY 395
+AVK++S + K+ + E+ + + H+N++ L+ E D LV E
Sbjct: 52 VAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 396 MPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSN 455
M + +L + I + L+ E+ +++ + +LH+ ++HRD+K SN
Sbjct: 111 M-DANLCQVI----------HMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 456 IMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFG 515
I++ S+ ++ DFGLART N T Y APE L DI++ G
Sbjct: 157 IVVKSDCTLKILDFGLARTACTNF----MMTPYVVTRYYRAPEVILGMGYAANVDIWSVG 212
Query: 516 VLILEVACG 524
++ E+ G
Sbjct: 213 CIMGELVKG 221
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 23/228 (10%)
Query: 327 LGKGGFGT--VYKGIWRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWCY 384
+G G FG + + N+ +AVK + E + + E+ SLRH N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 385 ERHDFLLVYEYMPNGSLDKFIFYDETNSG---PGEVTLNWEKRLSVIHGTSQALDYLHNG 441
+V EY G L F N+G E +++ +S + Y H
Sbjct: 86 TPTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLIS-------GVSYCH-- 132
Query: 442 SEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFL 501
+V HRD+K N +LD RL + L H K GTP Y+APE L
Sbjct: 133 -AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVL--HSQPKSTVGTPAYIAPEVLL 189
Query: 502 VGRATIET-DIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWLWELR 548
+ D+++ GV + + G P E+ +H + ++
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ 237
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 83
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D +V E M + +L + I ++ L+ E+
Sbjct: 84 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI----------QMELDHERMSY 132
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 133 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMV 185
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACG 524
T Y APE L DI++ G ++ E+ G
Sbjct: 186 PFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 31/219 (14%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 81
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF----IFYDETNSGPGEVT---LNWEKRL 425
H+N++ L+ + P SL++F I + ++ +V L+ E+
Sbjct: 82 HKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMM 182
Query: 486 KEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACG 524
T Y APE L DI++ G ++ E+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 108/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGI--WRNKEIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRL 74
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 75 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 173
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+AG T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 174 ---HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVSETSR-------QGKQEFIAEVTTI 368
K G + + LG+G +G V K + ++ + + V + G+ E+ +
Sbjct: 2 KLIGKYLMGDLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLL 60
Query: 369 GSLRHRNLVKLIGWCY--ERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
LRH+N+++L+ Y E+ +V EY G + +S P EKR
Sbjct: 61 RRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML------DSVP-------EKRFP 107
Query: 427 VI--HG----TSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLK 480
V HG L+YLH+ + ++H+DIK N++L + ++ G+A +
Sbjct: 108 VCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP-FA 163
Query: 481 THHSTKEIAGTPGYMAPE--SFLVGRATIETDIYAFGVLILEVACGRKP 527
+ + G+P + PE + L + + DI++ GV + + G P
Sbjct: 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 108/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGI--WRNKEIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRL 74
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 75 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 173
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+AG T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 174 ---HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 81
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D +V E M + +L + I ++ L+ E+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI----------QMELDHERMSY 130
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMT 183
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACG 524
T Y APE L DI++ G ++ E+ G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 31/219 (14%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVN 82
Query: 373 HRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF----IFYDETNSGPGEVT---LNWEKRL 425
H+N++ L+ + P SL++F I + ++ +V L+ E+
Sbjct: 83 HKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 130
Query: 426 SVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHST 485
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 131 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMM 183
Query: 486 KEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACG 524
T Y APE L DI++ G ++ E+ G
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 27/246 (10%)
Query: 299 INGTNLAPKKFRLKELKKATGN-FNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSET-- 353
+ NLA K R ++ G+ + +G G +G V R +++A+K++
Sbjct: 34 VAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD 93
Query: 354 SRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDK-FIFYDETNS 412
+ + E+ + +H N++ + ++ +P G ++ D S
Sbjct: 94 VVTNAKRTLRELKILKHFKHDNIIAIKD---------ILRPTVPYGEFKSVYVVLDLMES 144
Query: 413 GPGEVT-----LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLG 467
++ L E ++ + L Y+H+ +V+HRD+K SN++++ ++G
Sbjct: 145 DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIG 201
Query: 468 DFGLARTIQENLKTH-HSTKEIAGTPGYMAPESFL-VGRATIETDIYAFGVLILEVACGR 525
DFG+AR + + H + E T Y APE L + T D+++ G + E+ R
Sbjct: 202 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
Query: 526 K--PGN 529
+ PG
Sbjct: 262 QLFPGK 267
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 34/230 (14%)
Query: 327 LGKGGFGTVYKGIWRNK---EIAVKRVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
+G G FG + R+K E+ + E + E+ SLRH N+V+
Sbjct: 28 IGSGNFGVA--RLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSG---PGEVTLNWEKRLSVIHGTSQALDYLHN 440
++ EY G L + I N+G E +++ LS + Y H+
Sbjct: 86 LTPTHLAIIMEYASGGELYERI----CNAGRFSEDEARFFFQQLLS-------GVSYCHS 134
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLG--DFGLARTIQENLKTHHSTKEIAGTPGYMAPE 498
++ HRD+K N +LD RL DFG +++ H K GTP Y+APE
Sbjct: 135 ---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKS----SVLHSQPKSTVGTPAYIAPE 187
Query: 499 SFLVGRATIE---TDIYAFGVLILEVACGRKPGNQSEQ-NSYNNSIVHWL 544
L R + D+++ GV + + G P E+ Y +I L
Sbjct: 188 VLL--RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 101/257 (39%), Gaps = 38/257 (14%)
Query: 306 PKKFRLKELKKATGNFNPKNKLGKGGF-----------GTVYKGIWRNKEIAVKRVSETS 354
P RLKE++ +F +G+G F G VY NK +KR +
Sbjct: 48 PIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSC 107
Query: 355 RQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFL-LVYEYMPNGSLDKFIFYDETNSG 413
+ +++ + R + + + ++ ++L LV EY G L + S
Sbjct: 108 FREERDVLVN-------GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLL------SK 154
Query: 414 PGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLAR 473
GE R + A+D +H +HRDIK NI+LD + RL DFG
Sbjct: 155 FGERIPAEMARFYLAE-IVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCL 210
Query: 474 TIQENLKTHHSTKEIAGTPGYMAPESF-------LVGRATIETDIYAFGVLILEVACGRK 526
++ + T S + GTP Y++PE G E D +A GV E+ G+
Sbjct: 211 KLRAD-GTVRSLVAV-GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQT 268
Query: 527 PGNQSEQNSYNNSIVHW 543
P IVH+
Sbjct: 269 PFYADSTAETYGKIVHY 285
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVN 81
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D +V E M + +L + I ++ L+ E+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI----------QMELDHERMSY 130
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 131 LLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMT 183
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACG 524
T Y APE L DI++ G ++ E+ G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 316 KATGNFNPKNKLGKGGFGTVYKGIWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLR 372
K N P +G Y I + +A+K++S + K+ + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVN 81
Query: 373 HRNLVKLIGW------CYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLS 426
H+N++ L+ E D +V E M + +L + I ++ L+ E+
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI----------QMELDHERMSY 130
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTK 486
+++ + +LH+ ++HRD+K SNI++ S+ ++ DFGLART T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA----GTSFMMT 183
Query: 487 EIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACG 524
T Y APE L DI++ G ++ E+ G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 108/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGI--WRNKEIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRL 70
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 71 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 169
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+AG T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 170 ---HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 27/246 (10%)
Query: 299 INGTNLAPKKFRLKELKKATGN-FNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSET-- 353
+ NLA K R ++ G+ + +G G +G V R +++A+K++
Sbjct: 33 VAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD 92
Query: 354 SRQGKQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDK-FIFYDETNS 412
+ + E+ + +H N++ + ++ +P G ++ D S
Sbjct: 93 VVTNAKRTLRELKILKHFKHDNIIAIKD---------ILRPTVPYGEFKSVYVVLDLMES 143
Query: 413 GPGEVT-----LNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLG 467
++ L E ++ + L Y+H+ +V+HRD+K SN++++ ++G
Sbjct: 144 DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIG 200
Query: 468 DFGLARTIQENLKTH-HSTKEIAGTPGYMAPESFL-VGRATIETDIYAFGVLILEVACGR 525
DFG+AR + + H + E T Y APE L + T D+++ G + E+ R
Sbjct: 201 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
Query: 526 K--PGN 529
+ PG
Sbjct: 261 QLFPGK 266
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 28/189 (14%)
Query: 345 IAVKRVS---ETSRQGKQEFIAEVTTIGSLRHRNLVKLIGW------CYERHDFLLVYEY 395
+AVK++S + K+ + E+ + + H+N++ L+ E D LV E
Sbjct: 50 VAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 108
Query: 396 MPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSN 455
M + +L + I + L+ E+ +++ + +LH+ ++HRD+K SN
Sbjct: 109 M-DANLCQVI----------HMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 154
Query: 456 IMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESFLVGRATIETDIYAFG 515
I++ S+ ++ DFGLART N T Y APE L DI++ G
Sbjct: 155 IVVKSDCTLKILDFGLARTASTNF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 210
Query: 516 VLILEVACG 524
++ E+ G
Sbjct: 211 CIMGELVKG 219
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 101/232 (43%), Gaps = 43/232 (18%)
Query: 320 NFNPKNKLGKGGFGTVYKGIWRNKE--IAVKRVSETSRQ--GKQEFIAEVTTIGSLRHRN 375
N+ K+ +G+G +G VY +N E +A+K+V+ + + E+T + L+
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 376 LVKLIGWCYE----RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGT 431
+++L + D L + + + L K + L E ++++
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLF--------KTPIFLTEEHIKTILYNL 138
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTI---------------- 475
+++H E ++HRD+K +N +L+ + + ++ DFGLARTI
Sbjct: 139 LLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENE 195
Query: 476 -----QENLKTHHSTKEIAGTPGYMAPESFLVGR-ATIETDIYAFGVLILEV 521
+NLK ++ + T Y APE L+ T DI++ G + E+
Sbjct: 196 EPGPHNKNLKKQLTSHVV--TRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 74
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 173
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 174 ---HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGI--WRNKEIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRL 70
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--------IFYDETNSGPGEVTL 419
+ ++H N++ L+ + P SL++F + + N+ L
Sbjct: 71 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKL 118
Query: 420 NWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 169
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 170 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 26/219 (11%)
Query: 324 KNKLGKGGFGTVYKGI--WRNKEIAVKRVSETSRQGKQEFIAEVTTIGSLR-HRNLVKLI 380
++ LG+G V I ++E AVK + + + EV + + HRN+++LI
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 381 GWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
+ E F LV+E M GS+ I N + V+ + ALD+LHN
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRR--------HFNELEASVVVQDVASALDFLHN 129
Query: 441 GSEKRVLHRDIKSSNIMLDSEFN---ARLGDFGLARTIQENLKTHH-STKEI---AGTPG 493
K + HRD+K NI+ + ++ DF L I+ N ST E+ G+
Sbjct: 130 ---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAE 186
Query: 494 YMAPESF--LVGRATI---ETDIYAFGVLILEVACGRKP 527
YMAPE A+I D+++ GV++ + G P
Sbjct: 187 YMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 48/230 (20%)
Query: 327 LGKGGFGTVYKG--IWRNKEIAVKRVS---ETSRQGKQEFIAEVTTIGSLRHRNLVKLIG 381
+G G +G+V + +IAVK++S ++ K+ + E+ + ++H N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 117
Query: 382 WCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRLS------VIHGTSQ 433
+ P SL++F ++ G + ++L+ +I+ +
Sbjct: 118 V------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 165
Query: 434 ALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAG--- 490
L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR H+ E+ G
Sbjct: 166 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMTGYVA 213
Query: 491 TPGYMAPESFL-VGRATIETDIYAFGVLILEVACGRK--PG----NQSEQ 533
T Y APE L + DI++ G ++ E+ GR PG NQ +Q
Sbjct: 214 TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQ 263
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 74
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 75 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR------ 173
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 174 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 74
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 75 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 173
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 174 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 20/224 (8%)
Query: 327 LGKGGFGTVYKGIWRN--KEIAVKRVSE---TSRQG--KQEFIAEVTTIGSLRHRNLVKL 379
+GKG F V + I R ++ AVK V TS G ++ E + L+H ++V+L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
+ +V+E+M L F ++G + + ++ H Q L+ L
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL-CFEIVKRADAG-----FVYSEAVAS-HYMRQILEALR 144
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNA---RLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
+ ++HRD+K ++L S+ N+ +LG FG+A + E+ GTP +MA
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR---VGTPHFMA 201
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSI 540
PE D++ GV++ + G P +++ + I
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII 245
>pdb|2CNA|A Chain A, The Covalent And Three-Dimensional Structure Of
Concanavalin A, Iv.Atomic Coordinates,Hydrogen
Bonding,And Quaternary Structure
Length = 237
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 23 QVSSLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQL 80
Q +LHF F F++ ++ L D +T +++T G+P + GRA++ +
Sbjct: 122 QTDALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPEGSSVGRALFYAPVHI 181
Query: 81 WRDNKNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
W + V A F TF I + + P +G+AF I+ + +P S G+ LG+
Sbjct: 182 WESSATVSA-FEATFAFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGL 232
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 144 IVAIEFDTKKSYEQDINDN---HVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQN 200
IVA+E DT + DI D H+G+D+ SV S + + N+ +G + Y+ +
Sbjct: 4 IVAVELDTYPN--TDIGDPSYPHIGIDIKSVRSKKTA---KWNMQDGKVGTAHIIYNSVD 58
Query: 201 ----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
V N + +S +DL++ LPE V VG SASTG + N + SW+F
Sbjct: 59 KRLSAVVSYPNADATSVSYDVDLNDVLPEWVRVGLSASTGLYKETNTILSWSF 111
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 318 TGNFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQGKQEFIAEVTTIGSLRHRN 375
T + K +G G + + I + N E AVK + ++ R +E I + G +H N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE-IEILLRYG--QHPN 77
Query: 376 LVKLIGWCYERHDFLLVYEYMPNGSL-DKFI---FYDETNSGPGEVTLNWEKRLSVIHGT 431
++ L + +V E M G L DK + F+ E + +V+
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREAS------------AVLFTI 125
Query: 432 SQALDYLHNGSEKRVLHRDIKSSNIMLDSEF----NARLGDFGLARTIQENLKTHHSTKE 487
++ ++YLH + V+HRD+K SNI+ E + R+ DFG A+ ++ +
Sbjct: 126 TKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR-------AENG 175
Query: 488 IAGTPGY----MAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
+ TP Y +APE DI++ GVL+ + G P
Sbjct: 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 26 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 81
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 82 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 180
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 181 ---HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 26 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 81
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 82 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 180
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 181 ---HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 326 KLGKGGFGTVYKGIWRNKEIAVK--RVSETSRQGKQEFIAEVTTIGSLRHRNLVKLIGWC 383
KL + G ++KG W+ +I VK +V + S + ++F E + H N++ ++G C
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 384 YE---RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHN 440
H L+ + +MP GSL + ++ TN ++ + + ++ + +LH
Sbjct: 77 QSPPAPHPTLITH-WMPYGSLYN-VLHEGTN-----FVVDQSQAVKFALDMARGMAFLHT 129
Query: 441 GSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGYMAPESF 500
E + + S ++M+D + AR+ + + Q + + P ++APE+
Sbjct: 130 -LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMY--------APAWVAPEAL 180
Query: 501 LVGRATI---ETDIYAFGVLILEVACGRKP 527
D+++F VL+ E+ P
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 26 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 81
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 82 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 180
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 181 ---HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|1CN1|A Chain A, Crystal Structure Of Demetallized Concanavalin A. The
Metal- Binding Region
pdb|1CN1|B Chain B, Crystal Structure Of Demetallized Concanavalin A. The
Metal- Binding Region
pdb|3CNA|A Chain A, Structure Of Concanavalin A At 2.4 Angstroms Resolution
Length = 237
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 144 IVAIEFDTKKSYEQDINDN---HVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQN 200
IVA+E DT + DI D H+G+D+ SV S + + N+ +G + Y+ +
Sbjct: 4 IVAVELDTYPN--TDIGDPSYPHIGIDIKSVRSKKTA---KWNMQDGKVGTAHIIYNSVD 58
Query: 201 ----ITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
V N + +S +DL++ LPE V VG SASTG + N + SW+F
Sbjct: 59 KRLSAVVSYPNADATSVSYDVDLNDVLPEWVRVGLSASTGLYKETNTILSWSF 111
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 23 QVSSLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQL 80
Q +LHF F F++ ++ L D +T +++T G+P + GRA++ +
Sbjct: 122 QTDALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPEGSSVGRALFYAPVHI 181
Query: 81 WRDNKNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
W ++ +F TF I + + P +G+AF I+ + +P S G+ LG+
Sbjct: 182 W-ESSAATVSFEATFAFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGL 232
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 20/224 (8%)
Query: 327 LGKGGFGTVYKGIWRN--KEIAVKRVSE---TSRQG--KQEFIAEVTTIGSLRHRNLVKL 379
+GKG F V + I R ++ AVK V TS G ++ E + L+H ++V+L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 380 IGWCYERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLH 439
+ +V+E+M L F ++G + + ++ H Q L+ L
Sbjct: 94 LETYSSDGMLYMVFEFMDGADL-CFEIVKRADAG-----FVYSEAVAS-HYMRQILEALR 146
Query: 440 NGSEKRVLHRDIKSSNIMLDSEFNA---RLGDFGLARTIQENLKTHHSTKEIAGTPGYMA 496
+ ++HRD+K ++L S+ N+ +LG FG+A + E+ GTP +MA
Sbjct: 147 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR---VGTPHFMA 203
Query: 497 PESFLVGRATIETDIYAFGVLILEVACGRKPGNQSEQNSYNNSI 540
PE D++ GV++ + G P +++ + I
Sbjct: 204 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII 247
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGI--WRNKEIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRL 74
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 75 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 173
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 174 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 24 EVPERYQNLSP---IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 79
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 80 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR------ 178
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 179 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|2GDF|A Chain A, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|B Chain B, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|C Chain C, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|D Chain D, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|3AX4|A Chain A, Three-Dimensional Structure Of Lectin From Dioclea
Violacea And Comparative Vasorelaxant Effects With
Dioclea Rostrata
Length = 237
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 144 IVAIEFDTKKSYE-QDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQ--- 199
IVA+E D+ + + D N H+G+D+ S IR R N+ G V + Y+
Sbjct: 4 IVAVELDSYPNTDIGDPNYPHIGIDIKS---IRSKSTARWNMQTGKVGTVHISYNSVAKR 60
Query: 200 -NITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
+ V + + +S +DL+ LPE V VG SA+TG + N + SW+F
Sbjct: 61 LSAVVSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSF 111
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 26 SLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWRD 83
SLHF+F F++ ++ L D T + +++T G P N GRA++ +W
Sbjct: 125 SLHFSFHKFSQNPKDLILQGDAFTDSDGNLELTKVSSSGDPQGNSVGRALFYAPVHIWEK 184
Query: 84 NKNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
+ V A+F TF I + +P +G+ F IA + +P S G+ LG+
Sbjct: 185 SA-VVASFDATFTFLIKSPDREPADGITFFIANTDTSIPSGSGGRLLGL 232
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 47/235 (20%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGI--WRNKEIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 25 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRL 80
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 81 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 179
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PG 528
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 180 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|3SH3|A Chain A, Crystal Structure Of A Pro-Inflammatory Lectin From The
Seeds Of Dioclea Wilsonii Standl
Length = 237
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 144 IVAIEFDTKKSYE-QDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQ--- 199
IVA+E D+ + + D N H+G+D+ S IR R N+ G V + Y+
Sbjct: 4 IVAVELDSYPNTDIGDPNYPHIGIDIKS---IRSKSTARWNMQTGKVGTVHISYNSVAKR 60
Query: 200 -NITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
+ V + + +S +DL+ LPE V VG SA+TG + N + SW+F
Sbjct: 61 LSAVVSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSF 111
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 26 SLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWRD 83
SLHF+F F++ ++ L D T + +++T G P N GRA++ +W
Sbjct: 125 SLHFSFHKFSQNPKDLILQGDAFTDSDGNLELTKVSNSGDPQGNSVGRALFYAPVHIWEK 184
Query: 84 NKNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
+ V A+F TF I + +P +G+ F IA + +P S G+ LG+
Sbjct: 185 SA-VVASFDATFTFLIKSPDREPADGITFFIANTDTSIPSGSGGRLLGL 232
>pdb|2JE9|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|B Chain B, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|C Chain C, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|D Chain D, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
Length = 239
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 144 IVAIEFDTKKSYE-QDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQ--- 199
IVA+E D+ + + D N H+G+D+ S IR R N+ G V + Y+
Sbjct: 6 IVAVELDSYPNTDIGDPNYPHIGIDIKS---IRSKSTARWNMQTGKVGTVHISYNSVAKR 62
Query: 200 -NITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
+ V + + +S +DL+ LPE V VG SA+TG + N + SW+F
Sbjct: 63 LSAVVSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSF 113
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 26 SLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWRD 83
SLHF+F F++ ++ L D T + +Q+T G P N GRA++ +W
Sbjct: 127 SLHFSFHKFSQNPKDLILQGDAFTDSDGNLQLTKVSSSGDPQGNSVGRALFYAPVHIWEK 186
Query: 84 NKNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
+ V A+F TF I + +P +G+ F IA + +P S G+ LG+
Sbjct: 187 SA-VVASFDATFTFLIKSPDREPADGITFFIANTDTSIPSGSGGRLLGL 234
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEF-NA--RLGDFGLARTIQENLKTHH 483
++ +A+ YLH+ + + HRD+K N++ S+ NA +L DFG A+ +H+
Sbjct: 126 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 178
Query: 484 STKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
S TP Y+APE + D+++ GV++ + CG P
Sbjct: 179 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGI--WRNKEIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRL 70
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 71 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 169
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 170 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|2JEC|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|B Chain B, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|C Chain C, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|D Chain D, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
Length = 239
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 144 IVAIEFDTKKSYE-QDINDNHVGLDVNSVYSIRQVPLTRVNLANGTDIKVQVRYDGQ--- 199
IVA+E D+ + + D N H+G+D+ S IR R N+ G V + Y+
Sbjct: 6 IVAVELDSYPNTDIGDPNYPHIGIDIKS---IRSKSTARWNMQTGKVGTVHISYNSVAKR 62
Query: 200 -NITVFVANMETPLLSEPIDLSEYLPEKVFVGFSASTGDDTQLNCVKSWAF 249
+ V + + +S +DL+ LPE V VG SA+TG + N + SW+F
Sbjct: 63 LSAVVSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSF 113
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 26 SLHFNFQSFTEQNRNE-LSFDNSTVAKSAIQVT-YDVRGAPITNQSGRAIYKDQFQLWRD 83
SLHF+F F++ ++ L D T + +Q+T G P N GRA++ +W
Sbjct: 127 SLHFSFNQFSQNPKDLILQGDAFTDSDGNLQLTKVSSSGDPQGNSVGRALFYAPVHIWEK 186
Query: 84 NKNVKATFSTTFVLNILNQTAQPGEGLAFVIAG-NKDLPENSEGQWLGI 131
+ V A+F TF I + +P +G+ F IA + +P S G+ LG+
Sbjct: 187 SA-VVASFDATFTFLIKSPDREPADGITFFIANTDTSIPSGSGGRLLGL 234
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEF-NA--RLGDFGLARTIQENLKTHH 483
++ +A+ YLH+ + + HRD+K N++ S+ NA +L DFG A+ +H+
Sbjct: 127 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 179
Query: 484 STKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
S TP Y+APE + D+++ GV++ + CG P
Sbjct: 180 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 26 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 81
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 82 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 180
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 181 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEF-NA--RLGDFGLARTIQENLKTHH 483
++ +A+ YLH+ + + HRD+K N++ S+ NA +L DFG A+ +H+
Sbjct: 128 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 180
Query: 484 STKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
S TP Y+APE + D+++ GV++ + CG P
Sbjct: 181 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 16/148 (10%)
Query: 327 LGKGGFGTVYKGIWRNKEIAVKRVSETSRQGKQE---FIAEVTTIGSLRHRNLVKLIGWC 383
+GKG FG VY G W E+A+ R+ + R + + F EV RH N+V +G C
Sbjct: 41 IGKGRFGQVYHGRWHG-EVAI-RLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 384 YERHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYLHNGSE 443
++ +L + ++ L+ K + + + YLH
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVV-------RDAKIVLDVNKTRQIAQEIVKGMGYLH---A 148
Query: 444 KRVLHRDIKSSNIMLDSEFNARLGDFGL 471
K +LH+D+KS N+ D+ + DFGL
Sbjct: 149 KGILHKDLKSKNVFYDNG-KVVITDFGL 175
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 74
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 75 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 173
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 174 ---HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 40/242 (16%)
Query: 300 NGTNLAPKKFRLKELKKATGNFNPKNKLGKGGFGTVYKGIWR--NKEIAVKRVSETSRQG 357
+G +L + + + + G + K +G G + + + + N E AVK + ++ R
Sbjct: 9 SGVDLGTENLYFQSMVFSDG-YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDP 67
Query: 358 KQEFIAEVTTIGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSL-DKFI---FYDETNSG 413
+E I + G +H N++ L + LV E M G L DK + F+ E +
Sbjct: 68 SEE-IEILLRYG--QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREAS 124
Query: 414 PGEVTLNWEKRLSVIHGTSQALDYLHNGSEKRVLHRDIKSSNIM-LDSEFNA---RLGDF 469
V+H + ++YLH+ + V+HRD+K SNI+ +D N R+ DF
Sbjct: 125 ------------FVLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDF 169
Query: 470 GLARTIQENLKTHHSTKEIAGTPGY----MAPESFLVGRATIETDIYAFGVLILEVACGR 525
G A+ ++ + + TP Y +APE DI++ G+L+ + G
Sbjct: 170 GFAKQLR-------AENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGY 222
Query: 526 KP 527
P
Sbjct: 223 TP 224
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEF-NA--RLGDFGLARTIQENLKTHH 483
++ +A+ YLH+ + + HRD+K N++ S+ NA +L DFG A+ +H+
Sbjct: 121 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 173
Query: 484 STKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
S TP Y+APE + D+++ GV++ + CG P
Sbjct: 174 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 427 VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEF-NA--RLGDFGLARTIQENLKTHH 483
++ +A+ YLH+ + + HRD+K N++ S+ NA +L DFG A+ +H+
Sbjct: 166 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHN 218
Query: 484 STKEIAGTPGYMAPESFLVGRATIETDIYAFGVLILEVACGRKP 527
S TP Y+APE + D+++ GV++ + CG P
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 74
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 75 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 173
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 174 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 74
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 75 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 173
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 174 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 47/236 (19%)
Query: 313 ELKKATGNFNPKNKLGKGGFGTVYKGIWRNK--EIAVKRVS---ETSRQGKQEFIAEVTT 367
E+ + N +P +G G +G+V +AVK++S ++ K+ + E+
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 74
Query: 368 IGSLRHRNLVKLIGWCYERHDFLLVYEYMPNGSLDKF--IFYDETNSGPGEVTLNWEKRL 425
+ ++H N++ L+ + P SL++F ++ G + ++L
Sbjct: 75 LKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 426 S------VIHGTSQALDYLHNGSEKRVLHRDIKSSNIMLDSEFNARLGDFGLARTIQENL 479
+ +I+ + L Y+H+ ++HRD+K SN+ ++ + ++ DFGLAR
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 173
Query: 480 KTHHSTKEIAG---TPGYMAPESFLVGRATIET-DIYAFGVLILEVACGRK--PGN 529
H+ E+ G T Y APE L +T DI++ G ++ E+ GR PG
Sbjct: 174 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 39/249 (15%)
Query: 327 LGKGGFGTVYKGIWRNKE----IAVKRVSETSRQGKQEF-IAEVTTIGSLRHRNLVKLIG 381
LG+G V++G R+K+ A+K + S + + E + L H+N+VKL
Sbjct: 17 LGQGATANVFRG--RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 382 WCYE---RHDFLLVYEYMPNGSLDKFIFYDETNSGPGEVTLNWEKRLSVIHGTSQALDYL 438
E RH +L+ E+ P GSL + +E ++ G L + L V+ +++L
Sbjct: 75 IEEETTTRHK-VLIMEFCPCGSL--YTVLEEPSNAYG---LPESEFLIVLRDVVGGMNHL 128
Query: 439 HNGSEKRVLHRDIKSSNIML----DSEFNARLGDFGLARTIQENLKTHHSTKEIAGTPGY 494
E ++HR+IK NIM D + +L DFG AR ++++ + GT Y
Sbjct: 129 R---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD----EQFVXLYGTEEY 181
Query: 495 MAPESFLVGRATIE----------TDIYAFGVLILEVACGRKPGNQSEQNSYNNSIVHWL 544
+ P+ + RA + D+++ GV A G P E N +++ +
Sbjct: 182 LHPDMY--ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239
Query: 545 WELRRKGRI 553
+ G I
Sbjct: 240 ITGKPSGAI 248
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,484,632
Number of Sequences: 62578
Number of extensions: 838205
Number of successful extensions: 4711
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 227
Number of HSP's that attempted gapping in prelim test: 1983
Number of HSP's gapped (non-prelim): 1229
length of query: 644
length of database: 14,973,337
effective HSP length: 105
effective length of query: 539
effective length of database: 8,402,647
effective search space: 4529026733
effective search space used: 4529026733
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)