Query 006454
Match_columns 644
No_of_seqs 244 out of 1379
Neff 4.3
Searched_HMMs 29240
Date Tue Mar 26 01:27:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006454.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006454hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 7E-206 2E-210 1666.1 45.4 540 102-644 1-541 (555)
2 1pj3_A NAD-dependent malic enz 100.0 6E-205 2E-209 1663.0 45.1 541 102-644 3-546 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 4E-205 1E-209 1668.6 43.0 544 98-644 33-578 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 1E-120 4E-125 980.4 30.3 379 185-635 59-449 (487)
5 2a9f_A Putative malic enzyme ( 100.0 1E-111 4E-116 899.9 19.9 361 174-616 24-391 (398)
6 1vl6_A Malate oxidoreductase; 100.0 4E-106 1E-110 856.3 24.0 354 173-612 27-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 1.2E-85 4.1E-90 709.6 26.1 382 176-640 24-420 (439)
8 3gvp_A Adenosylhomocysteinase 98.8 6.6E-08 2.3E-12 104.8 15.1 168 305-512 112-318 (435)
9 3h9u_A Adenosylhomocysteinase; 98.8 2.8E-08 9.5E-13 107.8 12.1 130 351-514 171-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.2 4.1E-06 1.4E-10 89.3 10.9 219 218-502 26-295 (401)
11 3n58_A Adenosylhomocysteinase; 97.8 0.00011 3.7E-09 80.4 12.6 128 351-512 207-345 (464)
12 3ond_A Adenosylhomocysteinase; 97.7 9.3E-05 3.2E-09 81.5 9.6 132 351-515 225-366 (488)
13 4dio_A NAD(P) transhydrogenase 97.0 0.00082 2.8E-08 72.4 6.8 110 381-508 187-322 (405)
14 1l7d_A Nicotinamide nucleotide 97.0 0.0023 7.8E-08 67.4 10.0 226 218-501 19-296 (384)
15 3p2y_A Alanine dehydrogenase/p 96.4 0.0033 1.1E-07 67.3 6.5 100 382-502 182-305 (381)
16 3k92_A NAD-GDH, NAD-specific g 96.4 0.05 1.7E-06 59.0 15.4 178 305-502 126-329 (424)
17 3d4o_A Dipicolinate synthase s 96.3 0.03 1E-06 56.5 12.0 122 362-512 133-255 (293)
18 4fcc_A Glutamate dehydrogenase 96.2 0.22 7.6E-06 54.4 19.3 183 304-502 140-354 (450)
19 3aoe_E Glutamate dehydrogenase 96.0 0.041 1.4E-06 59.6 12.2 178 305-503 123-324 (419)
20 3jyo_A Quinate/shikimate dehyd 95.9 0.02 6.7E-07 58.4 8.7 88 368-475 111-205 (283)
21 1a4i_A Methylenetetrahydrofola 95.9 0.018 6.1E-07 60.0 8.4 96 362-501 143-239 (301)
22 3l07_A Bifunctional protein fo 95.7 0.027 9.1E-07 58.3 8.8 83 364-484 141-224 (285)
23 3tri_A Pyrroline-5-carboxylate 95.6 0.056 1.9E-06 54.4 10.6 121 384-533 3-127 (280)
24 3p2o_A Bifunctional protein fo 95.3 0.045 1.5E-06 56.6 8.8 92 363-498 139-231 (285)
25 3r3j_A Glutamate dehydrogenase 95.3 0.55 1.9E-05 51.5 17.5 190 305-514 145-368 (456)
26 3ngx_A Bifunctional protein fo 95.2 0.042 1.5E-06 56.6 8.3 82 362-483 130-212 (276)
27 3aog_A Glutamate dehydrogenase 95.2 0.27 9.2E-06 53.6 14.8 179 305-502 140-344 (440)
28 1b0a_A Protein (fold bifunctio 95.2 0.04 1.4E-06 57.0 7.9 95 362-500 137-232 (288)
29 3tnl_A Shikimate dehydrogenase 95.0 0.043 1.5E-06 57.0 7.8 91 368-475 138-237 (315)
30 4a5o_A Bifunctional protein fo 95.0 0.059 2E-06 55.8 8.6 83 364-484 141-224 (286)
31 2yfq_A Padgh, NAD-GDH, NAD-spe 95.0 0.18 6.2E-06 54.6 12.8 179 305-502 116-326 (421)
32 3don_A Shikimate dehydrogenase 95.0 0.024 8.3E-07 57.8 5.7 86 368-475 101-186 (277)
33 1edz_A 5,10-methylenetetrahydr 95.0 0.037 1.3E-06 58.0 7.1 114 365-502 149-278 (320)
34 3t4e_A Quinate/shikimate dehyd 94.9 0.045 1.5E-06 56.8 7.6 90 369-475 133-231 (312)
35 4e12_A Diketoreductase; oxidor 94.9 0.059 2E-06 53.9 8.2 98 385-504 5-124 (283)
36 4a26_A Putative C-1-tetrahydro 94.8 0.061 2.1E-06 56.0 8.2 95 361-499 142-239 (300)
37 1gpj_A Glutamyl-tRNA reductase 94.8 0.24 8.1E-06 52.5 12.7 102 381-502 164-269 (404)
38 2egg_A AROE, shikimate 5-dehyd 94.6 0.039 1.3E-06 56.3 6.1 87 369-475 125-215 (297)
39 3oj0_A Glutr, glutamyl-tRNA re 94.6 0.021 7E-07 51.2 3.6 88 362-475 4-91 (144)
40 1v8b_A Adenosylhomocysteinase; 94.2 0.23 7.9E-06 54.6 11.4 124 358-514 234-357 (479)
41 1c1d_A L-phenylalanine dehydro 94.1 0.17 5.7E-06 53.6 9.8 163 308-503 93-266 (355)
42 2bma_A Glutamate dehydrogenase 94.1 0.67 2.3E-05 51.0 14.6 178 306-502 159-372 (470)
43 2tmg_A Protein (glutamate dehy 94.0 1.2 4.2E-05 48.1 16.2 178 306-502 115-319 (415)
44 3u62_A Shikimate dehydrogenase 93.9 0.098 3.4E-06 52.5 7.1 144 314-499 42-200 (253)
45 2c2x_A Methylenetetrahydrofola 93.8 0.13 4.5E-06 53.0 8.0 98 362-501 136-234 (281)
46 2rir_A Dipicolinate synthase, 93.7 0.22 7.5E-06 50.3 9.4 110 375-512 148-257 (300)
47 1v9l_A Glutamate dehydrogenase 93.7 0.41 1.4E-05 51.9 11.9 177 306-502 116-325 (421)
48 1pjc_A Protein (L-alanine dehy 93.6 0.17 5.9E-06 52.7 8.5 96 382-501 165-269 (361)
49 2dpo_A L-gulonate 3-dehydrogen 93.4 0.23 7.7E-06 51.4 8.9 123 384-532 6-151 (319)
50 1leh_A Leucine dehydrogenase; 93.2 0.17 5.9E-06 53.6 7.8 159 311-502 93-264 (364)
51 1mld_A Malate dehydrogenase; o 93.1 0.34 1.1E-05 49.8 9.8 101 386-502 2-120 (314)
52 1bgv_A Glutamate dehydrogenase 93.1 1.8 6.2E-05 47.3 15.9 178 307-502 137-350 (449)
53 1pzg_A LDH, lactate dehydrogen 93.1 0.18 6.3E-06 52.1 7.7 102 385-504 10-137 (331)
54 3fbt_A Chorismate mutase and s 92.9 0.15 5.3E-06 52.1 6.8 104 369-502 107-218 (282)
55 3u95_A Glycoside hydrolase, fa 92.8 0.19 6.5E-06 54.9 7.8 42 480-524 140-181 (477)
56 3o8q_A Shikimate 5-dehydrogena 92.8 0.16 5.5E-06 51.7 6.7 50 368-428 110-159 (281)
57 3pwz_A Shikimate dehydrogenase 92.4 0.17 6E-06 51.2 6.3 98 314-428 44-153 (272)
58 2o4c_A Erythronate-4-phosphate 92.3 1.2 4.1E-05 47.5 13.0 188 352-583 81-281 (380)
59 2ewd_A Lactate dehydrogenase,; 92.3 0.17 5.7E-06 51.6 6.1 100 385-503 5-125 (317)
60 3dtt_A NADP oxidoreductase; st 92.1 0.2 6.8E-06 49.0 6.2 109 378-502 13-127 (245)
61 1hyh_A L-hicdh, L-2-hydroxyiso 92.1 0.16 5.6E-06 51.4 5.7 102 385-503 2-126 (309)
62 3d64_A Adenosylhomocysteinase; 92.1 0.37 1.3E-05 53.2 8.9 110 362-502 258-367 (494)
63 1gtm_A Glutamate dehydrogenase 92.0 1.2 4.1E-05 48.0 12.6 114 306-432 115-250 (419)
64 3tum_A Shikimate dehydrogenase 91.9 0.27 9.4E-06 49.9 7.0 48 369-427 110-157 (269)
65 3fef_A Putative glucosidase LP 91.5 0.29 9.9E-06 53.3 7.2 106 382-502 3-149 (450)
66 2ekl_A D-3-phosphoglycerate de 91.1 2 6.9E-05 44.1 12.6 121 351-500 90-233 (313)
67 1p77_A Shikimate 5-dehydrogena 90.9 0.28 9.7E-06 49.0 6.0 49 368-428 103-151 (272)
68 1b8p_A Protein (malate dehydro 90.9 0.27 9.4E-06 50.6 6.0 111 385-502 6-136 (329)
69 2eez_A Alanine dehydrogenase; 90.9 0.64 2.2E-05 48.5 8.8 96 382-501 164-268 (369)
70 1ldn_A L-lactate dehydrogenase 90.8 0.28 9.7E-06 50.3 5.9 105 385-502 7-126 (316)
71 2i6t_A Ubiquitin-conjugating e 90.7 0.42 1.4E-05 49.1 7.1 101 385-503 15-129 (303)
72 3oet_A Erythronate-4-phosphate 90.7 1.3 4.4E-05 47.4 11.0 118 351-500 83-211 (381)
73 1nyt_A Shikimate 5-dehydrogena 90.6 0.42 1.5E-05 47.6 6.9 49 368-428 103-151 (271)
74 2v6b_A L-LDH, L-lactate dehydr 90.6 0.079 2.7E-06 54.0 1.6 123 386-525 2-139 (304)
75 2d5c_A AROE, shikimate 5-dehyd 90.6 0.37 1.3E-05 47.5 6.4 81 369-475 102-182 (263)
76 3ce6_A Adenosylhomocysteinase; 90.6 1.8 6.2E-05 47.6 12.4 107 376-513 266-373 (494)
77 3mw9_A GDH 1, glutamate dehydr 90.5 1.5 5E-05 48.7 11.6 179 305-502 136-352 (501)
78 3hdj_A Probable ornithine cycl 90.4 1.3 4.3E-05 45.7 10.4 111 371-512 110-227 (313)
79 2i99_A MU-crystallin homolog; 90.2 0.9 3.1E-05 46.3 9.0 114 369-509 122-237 (312)
80 1x7d_A Ornithine cyclodeaminas 90.1 0.53 1.8E-05 49.3 7.4 114 369-510 116-238 (350)
81 1zud_1 Adenylyltransferase THI 90.1 0.37 1.2E-05 47.9 5.9 37 381-428 25-61 (251)
82 2hjr_A Malate dehydrogenase; m 90.0 0.22 7.7E-06 51.4 4.4 128 385-529 15-160 (328)
83 1a5z_A L-lactate dehydrogenase 89.9 0.48 1.6E-05 48.5 6.7 99 386-504 2-121 (319)
84 1obb_A Maltase, alpha-glucosid 89.7 0.29 9.8E-06 53.8 5.2 124 384-525 3-174 (480)
85 1o6z_A MDH, malate dehydrogena 89.7 0.22 7.4E-06 50.9 3.9 103 386-502 2-122 (303)
86 2g1u_A Hypothetical protein TM 89.6 0.63 2.1E-05 41.9 6.6 37 380-428 15-51 (155)
87 1t2d_A LDH-P, L-lactate dehydr 89.5 0.31 1E-05 50.3 4.9 102 385-504 5-131 (322)
88 3rui_A Ubiquitin-like modifier 89.4 0.36 1.2E-05 50.9 5.4 37 381-428 31-67 (340)
89 2dbq_A Glyoxylate reductase; D 89.1 4.5 0.00016 41.7 13.4 93 379-500 145-241 (334)
90 2gcg_A Glyoxylate reductase/hy 89.1 2.9 9.8E-05 43.0 11.9 122 351-500 98-247 (330)
91 2rcy_A Pyrroline carboxylate r 88.9 1.9 6.6E-05 41.6 9.9 93 384-504 4-96 (262)
92 3d0o_A L-LDH 1, L-lactate dehy 88.9 0.48 1.6E-05 48.7 5.8 107 383-502 5-126 (317)
93 2zqz_A L-LDH, L-lactate dehydr 88.8 0.29 9.9E-06 50.7 4.2 106 384-502 9-128 (326)
94 2hk9_A Shikimate dehydrogenase 88.8 0.75 2.6E-05 45.9 7.1 84 369-475 114-197 (275)
95 1s6y_A 6-phospho-beta-glucosid 88.6 0.3 1E-05 53.0 4.3 127 385-525 8-175 (450)
96 3h5n_A MCCB protein; ubiquitin 88.5 1.5 5.1E-05 45.9 9.4 38 380-428 114-151 (353)
97 1omo_A Alanine dehydrogenase; 88.3 1.6 5.6E-05 44.8 9.4 112 369-510 112-229 (322)
98 1ez4_A Lactate dehydrogenase; 88.3 0.36 1.2E-05 49.8 4.5 105 385-502 6-124 (318)
99 1smk_A Malate dehydrogenase, g 88.3 0.86 3E-05 46.9 7.3 104 385-502 9-128 (326)
100 1guz_A Malate dehydrogenase; o 88.2 0.85 2.9E-05 46.5 7.1 100 386-502 2-121 (310)
101 1u8x_X Maltose-6'-phosphate gl 88.2 0.43 1.5E-05 52.2 5.2 126 384-525 28-194 (472)
102 2vhw_A Alanine dehydrogenase; 87.9 0.64 2.2E-05 48.8 6.1 95 381-499 165-268 (377)
103 2zyd_A 6-phosphogluconate dehy 87.8 1.2 4E-05 48.5 8.3 102 381-502 12-116 (480)
104 3d1l_A Putative NADP oxidoredu 87.8 0.39 1.3E-05 46.9 4.1 98 381-502 7-105 (266)
105 1y6j_A L-lactate dehydrogenase 87.4 0.48 1.7E-05 48.7 4.8 98 385-502 8-126 (318)
106 4g2n_A D-isomer specific 2-hyd 87.4 3.6 0.00012 43.2 11.4 192 351-581 116-336 (345)
107 1nvt_A Shikimate 5'-dehydrogen 87.2 0.53 1.8E-05 47.2 4.8 49 367-428 111-159 (287)
108 2hmt_A YUAA protein; RCK, KTN, 87.1 0.41 1.4E-05 41.2 3.5 103 382-502 4-108 (144)
109 4huj_A Uncharacterized protein 87.0 0.67 2.3E-05 44.5 5.3 93 385-503 24-117 (220)
110 3ba1_A HPPR, hydroxyphenylpyru 87.0 3.5 0.00012 42.8 11.0 107 363-501 124-253 (333)
111 1wwk_A Phosphoglycerate dehydr 86.9 3.6 0.00012 42.0 11.0 110 362-500 102-233 (307)
112 3h8v_A Ubiquitin-like modifier 86.8 0.65 2.2E-05 47.9 5.3 38 380-428 32-69 (292)
113 3gvi_A Malate dehydrogenase; N 86.6 0.87 3E-05 47.3 6.2 106 382-502 5-127 (324)
114 3vku_A L-LDH, L-lactate dehydr 86.6 0.55 1.9E-05 48.9 4.7 106 384-502 9-128 (326)
115 4e21_A 6-phosphogluconate dehy 86.5 2.3 7.9E-05 44.5 9.4 95 382-501 20-117 (358)
116 1txg_A Glycerol-3-phosphate de 86.4 1.4 4.7E-05 44.0 7.4 94 386-502 2-107 (335)
117 1up7_A 6-phospho-beta-glucosid 86.2 1.3 4.5E-05 47.5 7.6 124 385-525 3-164 (417)
118 3gt0_A Pyrroline-5-carboxylate 86.2 1.7 5.7E-05 42.2 7.6 98 385-503 3-101 (247)
119 1lld_A L-lactate dehydrogenase 86.2 0.46 1.6E-05 47.7 3.8 103 384-503 7-128 (319)
120 1z82_A Glycerol-3-phosphate de 86.1 0.62 2.1E-05 47.4 4.7 95 384-504 14-116 (335)
121 1f0y_A HCDH, L-3-hydroxyacyl-C 86.0 0.95 3.2E-05 45.3 6.0 32 385-428 16-47 (302)
122 4gsl_A Ubiquitin-like modifier 86.0 0.76 2.6E-05 52.1 5.7 37 381-428 323-359 (615)
123 3k5p_A D-3-phosphoglycerate de 85.8 5.7 0.00019 42.9 12.2 193 350-581 101-322 (416)
124 1oju_A MDH, malate dehydrogena 85.7 0.85 2.9E-05 46.7 5.5 104 386-502 2-121 (294)
125 1xdw_A NAD+-dependent (R)-2-hy 85.7 4.9 0.00017 41.5 11.3 119 351-500 91-235 (331)
126 3jtm_A Formate dehydrogenase, 85.7 4.8 0.00016 42.3 11.3 174 351-555 108-309 (351)
127 1npy_A Hypothetical shikimate 85.7 1.1 3.7E-05 45.3 6.2 48 369-428 105-152 (271)
128 2j6i_A Formate dehydrogenase; 85.6 3.6 0.00012 43.3 10.3 144 331-501 88-259 (364)
129 3kkj_A Amine oxidase, flavin-c 85.5 0.75 2.6E-05 40.8 4.4 31 386-428 4-34 (336)
130 4hy3_A Phosphoglycerate oxidor 85.2 3.1 0.00011 44.0 9.7 179 362-581 133-339 (365)
131 1ur5_A Malate dehydrogenase; o 85.2 1 3.6E-05 45.9 5.9 100 385-502 3-122 (309)
132 2p4q_A 6-phosphogluconate dehy 85.1 1.6 5.5E-05 47.7 7.6 98 385-502 11-112 (497)
133 4ina_A Saccharopine dehydrogen 85.1 1.4 4.8E-05 46.6 7.0 96 385-500 2-108 (405)
134 3ado_A Lambda-crystallin; L-gu 84.7 1.4 4.7E-05 45.9 6.6 126 384-533 6-152 (319)
135 3vh1_A Ubiquitin-like modifier 84.6 0.9 3.1E-05 51.3 5.5 38 380-428 323-360 (598)
136 2xxj_A L-LDH, L-lactate dehydr 84.6 0.38 1.3E-05 49.4 2.3 100 385-502 1-119 (310)
137 2d4a_B Malate dehydrogenase; a 84.4 0.87 3E-05 46.7 4.9 99 386-502 1-119 (308)
138 1hdo_A Biliverdin IX beta redu 84.4 3 0.0001 37.8 8.0 98 384-499 3-111 (206)
139 3p7m_A Malate dehydrogenase; p 84.3 0.6 2.1E-05 48.4 3.6 106 383-502 4-125 (321)
140 2d0i_A Dehydrogenase; structur 84.2 6 0.00021 40.9 11.1 91 380-500 142-236 (333)
141 2cuk_A Glycerate dehydrogenase 84.0 7.5 0.00026 39.8 11.6 117 351-501 87-231 (311)
142 1jw9_B Molybdopterin biosynthe 84.0 0.79 2.7E-05 45.4 4.2 38 381-429 28-65 (249)
143 3tl2_A Malate dehydrogenase; c 84.0 0.76 2.6E-05 47.5 4.3 107 382-502 6-130 (315)
144 3nep_X Malate dehydrogenase; h 84.0 0.61 2.1E-05 48.3 3.5 104 386-502 2-121 (314)
145 4dgs_A Dehydrogenase; structur 83.7 6.1 0.00021 41.3 11.0 176 363-581 130-331 (340)
146 3lk7_A UDP-N-acetylmuramoylala 83.5 1.6 5.6E-05 46.6 6.7 119 381-538 6-125 (451)
147 1qp8_A Formate dehydrogenase; 83.5 11 0.00036 38.6 12.5 118 350-500 70-211 (303)
148 3ic5_A Putative saccharopine d 83.4 1.1 3.7E-05 37.3 4.3 84 384-489 5-92 (118)
149 1ks9_A KPA reductase;, 2-dehyd 83.4 1.8 6.2E-05 42.0 6.5 95 386-502 2-100 (291)
150 4egb_A DTDP-glucose 4,6-dehydr 83.3 3.7 0.00013 40.7 8.8 106 382-499 22-149 (346)
151 3i83_A 2-dehydropantoate 2-red 83.2 1.2 4E-05 45.2 5.2 98 385-503 3-109 (320)
152 1hye_A L-lactate/malate dehydr 83.2 1.8 6.1E-05 44.2 6.6 103 386-502 2-125 (313)
153 2raf_A Putative dinucleotide-b 83.0 2.4 8.1E-05 40.5 7.0 80 380-503 15-94 (209)
154 1x0v_A GPD-C, GPDH-C, glycerol 82.7 2.6 8.8E-05 42.7 7.5 109 384-503 8-128 (354)
155 2izz_A Pyrroline-5-carboxylate 82.6 2.4 8.3E-05 43.0 7.3 101 383-503 21-122 (322)
156 1lu9_A Methylene tetrahydromet 82.6 2.1 7E-05 42.7 6.6 75 340-428 70-152 (287)
157 3k96_A Glycerol-3-phosphate de 82.4 3.8 0.00013 42.8 8.8 100 384-503 29-137 (356)
158 3evt_A Phosphoglycerate dehydr 82.2 3.6 0.00012 42.7 8.5 189 351-581 83-301 (324)
159 1y7t_A Malate dehydrogenase; N 82.1 0.93 3.2E-05 46.1 4.0 110 385-502 5-133 (327)
160 2iz1_A 6-phosphogluconate dehy 82.1 3.1 0.00011 44.9 8.3 99 384-502 5-106 (474)
161 1pgj_A 6PGDH, 6-PGDH, 6-phosph 82.0 1.9 6.5E-05 46.7 6.6 97 386-502 3-106 (478)
162 2pi1_A D-lactate dehydrogenase 81.7 7 0.00024 40.6 10.5 139 352-522 87-251 (334)
163 3pqe_A L-LDH, L-lactate dehydr 81.6 0.74 2.5E-05 47.9 3.1 106 384-502 5-125 (326)
164 2yq5_A D-isomer specific 2-hyd 81.2 15 0.00051 38.4 12.8 120 351-501 92-238 (343)
165 3abi_A Putative uncharacterize 81.2 1.2 4E-05 46.1 4.4 89 385-500 17-109 (365)
166 1jay_A Coenzyme F420H2:NADP+ o 81.2 0.92 3.2E-05 42.4 3.3 94 386-503 2-101 (212)
167 3hg7_A D-isomer specific 2-hyd 81.1 3.5 0.00012 42.9 7.9 177 363-583 103-304 (324)
168 3i6i_A Putative leucoanthocyan 80.8 1 3.6E-05 45.1 3.8 101 381-496 7-117 (346)
169 2vns_A Metalloreductase steap3 80.8 1.5 5.2E-05 41.9 4.7 96 380-503 24-119 (215)
170 4fgw_A Glycerol-3-phosphate de 80.6 1.7 5.9E-05 46.5 5.5 95 385-489 35-140 (391)
171 1dxy_A D-2-hydroxyisocaproate 80.3 13 0.00044 38.4 11.9 120 351-501 90-235 (333)
172 4dll_A 2-hydroxy-3-oxopropiona 80.3 1.7 5.8E-05 44.1 5.2 34 383-428 30-63 (320)
173 3k6j_A Protein F01G10.3, confi 80.2 2.3 7.9E-05 46.4 6.5 32 385-428 55-86 (460)
174 2w2k_A D-mandelate dehydrogena 80.1 13 0.00044 38.7 11.8 96 379-500 158-257 (348)
175 3fi9_A Malate dehydrogenase; s 80.0 2.8 9.7E-05 43.9 6.9 107 382-502 6-129 (343)
176 1y8q_A Ubiquitin-like 1 activa 80.0 1.5 5.1E-05 45.8 4.7 37 381-428 33-69 (346)
177 2nac_A NAD-dependent formate d 79.5 6.7 0.00023 41.9 9.6 166 379-581 186-357 (393)
178 1sc6_A PGDH, D-3-phosphoglycer 79.4 19 0.00065 38.4 13.1 120 350-500 90-234 (404)
179 3b1f_A Putative prephenate deh 79.3 2.7 9.4E-05 41.3 6.2 96 384-501 6-103 (290)
180 3phh_A Shikimate dehydrogenase 79.1 1.6 5.5E-05 44.4 4.5 98 369-499 107-209 (269)
181 2pgd_A 6-phosphogluconate dehy 78.9 4.1 0.00014 44.1 7.9 98 385-502 3-104 (482)
182 3pp8_A Glyoxylate/hydroxypyruv 78.8 3.5 0.00012 42.5 7.0 191 351-581 86-301 (315)
183 3pef_A 6-phosphogluconate dehy 78.8 2.7 9.1E-05 41.6 5.9 32 385-428 2-33 (287)
184 1yj8_A Glycerol-3-phosphate de 78.8 2.4 8.2E-05 43.8 5.8 108 385-503 22-145 (375)
185 4gwg_A 6-phosphogluconate dehy 78.5 4.7 0.00016 44.2 8.3 98 385-502 5-106 (484)
186 2g76_A 3-PGDH, D-3-phosphoglyc 78.5 8 0.00028 40.2 9.7 120 351-500 111-256 (335)
187 3o38_A Short chain dehydrogena 78.4 3.3 0.00011 39.9 6.4 76 381-475 19-112 (266)
188 2uyy_A N-PAC protein; long-cha 78.3 3 0.0001 41.7 6.1 32 385-428 31-62 (316)
189 1lss_A TRK system potassium up 78.2 4.3 0.00015 34.6 6.3 33 384-428 4-36 (140)
190 3c85_A Putative glutathione-re 78.0 3.5 0.00012 37.7 6.1 37 381-428 36-72 (183)
191 2pzm_A Putative nucleotide sug 78.0 5.7 0.00019 39.5 8.1 103 380-499 16-136 (330)
192 2h78_A Hibadh, 3-hydroxyisobut 78.0 2.1 7E-05 42.6 4.9 32 385-428 4-35 (302)
193 3gvx_A Glycerate dehydrogenase 78.0 13 0.00045 37.9 10.9 176 363-582 85-282 (290)
194 2qrj_A Saccharopine dehydrogen 77.9 5.3 0.00018 43.0 8.2 71 384-486 214-289 (394)
195 3ggo_A Prephenate dehydrogenas 77.8 4.9 0.00017 41.0 7.7 93 385-499 34-128 (314)
196 3l6d_A Putative oxidoreductase 77.7 3 0.0001 42.0 6.1 36 381-428 6-41 (306)
197 3gpi_A NAD-dependent epimerase 77.6 1.5 5.1E-05 42.6 3.6 97 383-499 2-109 (286)
198 3vrd_B FCCB subunit, flavocyto 77.4 1.7 6E-05 44.4 4.2 35 384-428 2-36 (401)
199 3doj_A AT3G25530, dehydrogenas 77.3 2.4 8.2E-05 42.7 5.2 36 381-428 18-53 (310)
200 3gg9_A D-3-phosphoglycerate de 77.2 9.5 0.00033 40.0 9.8 189 351-581 97-325 (352)
201 2q1w_A Putative nucleotide sug 77.0 8.6 0.00029 38.2 9.1 104 381-499 18-137 (333)
202 3llv_A Exopolyphosphatase-rela 77.0 2.5 8.5E-05 37.0 4.6 34 383-428 5-38 (141)
203 2z2v_A Hypothetical protein PH 76.8 1.8 6.2E-05 45.4 4.2 120 383-531 15-137 (365)
204 1id1_A Putative potassium chan 76.2 2.1 7.1E-05 38.3 3.9 34 383-428 2-35 (153)
205 1j4a_A D-LDH, D-lactate dehydr 76.1 21 0.00073 36.8 12.0 123 350-502 91-238 (333)
206 3cky_A 2-hydroxymethyl glutara 76.1 2.8 9.4E-05 41.4 5.1 32 385-428 5-36 (301)
207 3ip1_A Alcohol dehydrogenase, 75.7 16 0.00056 37.9 11.1 80 372-474 201-292 (404)
208 3r6d_A NAD-dependent epimerase 75.7 2.8 9.7E-05 39.1 4.8 93 385-497 6-106 (221)
209 3e8x_A Putative NAD-dependent 75.6 4.4 0.00015 38.2 6.2 97 380-499 17-131 (236)
210 3pdu_A 3-hydroxyisobutyrate de 75.6 2.4 8.3E-05 41.9 4.6 32 385-428 2-33 (287)
211 2x0j_A Malate dehydrogenase; o 75.4 3.2 0.00011 42.7 5.5 104 386-502 2-121 (294)
212 2dq4_A L-threonine 3-dehydroge 75.1 5.5 0.00019 40.3 7.2 93 361-473 143-240 (343)
213 3c24_A Putative oxidoreductase 74.8 3.9 0.00013 40.4 5.8 91 385-502 12-104 (286)
214 1hyu_A AHPF, alkyl hydroperoxi 74.7 1.6 5.4E-05 47.3 3.2 100 313-428 134-244 (521)
215 2x5o_A UDP-N-acetylmuramoylala 74.5 13 0.00044 39.4 10.1 110 382-526 3-112 (439)
216 1yb4_A Tartronic semialdehyde 74.2 4.2 0.00014 39.8 5.9 30 385-426 4-33 (295)
217 4e5n_A Thermostable phosphite 74.2 11 0.00039 38.9 9.4 195 351-581 89-317 (330)
218 1mx3_A CTBP1, C-terminal bindi 73.9 16 0.00055 38.1 10.5 208 331-580 89-333 (347)
219 3dhn_A NAD-dependent epimerase 73.8 4.5 0.00015 37.6 5.7 96 385-498 5-111 (227)
220 1tt5_B Ubiquitin-activating en 73.7 2 6.9E-05 46.5 3.7 37 381-428 37-73 (434)
221 2z1m_A GDP-D-mannose dehydrata 73.7 6.8 0.00023 38.4 7.3 101 383-499 2-127 (345)
222 4aj2_A L-lactate dehydrogenase 73.7 1.4 4.8E-05 46.0 2.4 118 381-515 16-149 (331)
223 3qha_A Putative oxidoreductase 73.4 3.1 0.00011 41.7 4.8 33 384-428 15-47 (296)
224 3qsg_A NAD-binding phosphogluc 73.4 15 0.00052 37.0 9.9 33 385-428 25-57 (312)
225 3ldh_A Lactate dehydrogenase; 73.3 1.4 4.8E-05 46.1 2.3 116 384-516 21-152 (330)
226 2g5c_A Prephenate dehydrogenas 73.1 6.3 0.00021 38.6 6.8 97 385-502 2-99 (281)
227 4id9_A Short-chain dehydrogena 72.6 8.6 0.00029 38.1 7.8 97 380-499 15-126 (347)
228 1gdh_A D-glycerate dehydrogena 72.5 13 0.00045 38.1 9.3 121 352-500 90-239 (320)
229 1vpd_A Tartronate semialdehyde 72.5 3.2 0.00011 40.9 4.5 32 385-428 6-37 (299)
230 3d1c_A Flavin-containing putat 72.4 3.2 0.00011 41.2 4.6 36 383-429 3-38 (369)
231 3fwz_A Inner membrane protein 71.9 2.1 7.3E-05 37.9 2.9 32 385-428 8-39 (140)
232 3m2p_A UDP-N-acetylglucosamine 71.8 11 0.00037 36.9 8.2 93 385-499 3-109 (311)
233 3slg_A PBGP3 protein; structur 71.3 20 0.00067 35.9 10.1 101 381-499 21-141 (372)
234 4hb9_A Similarities with proba 71.1 3.6 0.00012 41.1 4.7 32 385-428 2-33 (412)
235 1bg6_A N-(1-D-carboxylethyl)-L 71.0 12 0.0004 37.5 8.4 93 385-500 5-110 (359)
236 1y8q_B Anthracycline-, ubiquit 70.4 2.9 0.0001 47.6 4.2 37 381-428 14-50 (640)
237 5mdh_A Malate dehydrogenase; o 70.1 1.7 5.7E-05 45.3 2.0 110 385-502 4-132 (333)
238 2ph5_A Homospermidine synthase 69.8 11 0.00038 41.6 8.4 99 384-500 13-115 (480)
239 3vtz_A Glucose 1-dehydrogenase 69.2 12 0.00042 36.5 7.9 79 379-475 9-92 (269)
240 3nrc_A Enoyl-[acyl-carrier-pro 69.1 9.9 0.00034 37.2 7.2 79 381-476 23-115 (280)
241 4b8w_A GDP-L-fucose synthase; 68.8 8 0.00027 37.1 6.3 93 381-499 3-113 (319)
242 1n2s_A DTDP-4-, DTDP-glucose o 68.5 6.1 0.00021 38.2 5.5 86 386-499 2-104 (299)
243 4ezb_A Uncharacterized conserv 68.2 4.9 0.00017 40.9 5.0 33 385-428 25-57 (317)
244 3ehe_A UDP-glucose 4-epimerase 68.1 16 0.00054 35.7 8.4 95 386-499 3-114 (313)
245 4a9w_A Monooxygenase; baeyer-v 68.0 3.8 0.00013 40.0 4.0 34 384-429 3-36 (357)
246 1i36_A Conserved hypothetical 67.7 9.5 0.00033 36.8 6.7 30 386-427 2-31 (264)
247 3kb6_A D-lactate dehydrogenase 67.5 23 0.00079 36.7 9.9 111 379-523 136-252 (334)
248 3s2u_A UDP-N-acetylglucosamine 67.3 8.3 0.00028 39.5 6.5 41 456-500 84-124 (365)
249 3hyw_A Sulfide-quinone reducta 67.2 3.9 0.00013 42.8 4.1 34 385-428 3-36 (430)
250 2c20_A UDP-glucose 4-epimerase 67.2 13 0.00045 36.4 7.6 99 385-499 2-118 (330)
251 3hhp_A Malate dehydrogenase; M 67.0 5.7 0.00019 41.0 5.2 103 386-502 2-121 (312)
252 3enk_A UDP-glucose 4-epimerase 66.9 18 0.00061 35.6 8.6 97 384-499 5-129 (341)
253 1e6u_A GDP-fucose synthetase; 66.8 7.8 0.00027 37.9 5.9 87 384-499 3-107 (321)
254 3fbs_A Oxidoreductase; structu 66.4 5.2 0.00018 38.1 4.5 32 385-428 3-34 (297)
255 2p5y_A UDP-glucose 4-epimerase 66.0 13 0.00044 36.3 7.3 98 386-499 2-117 (311)
256 4b4u_A Bifunctional protein fo 66.0 19 0.00063 37.6 8.7 84 363-484 158-242 (303)
257 2bka_A CC3, TAT-interacting pr 65.8 12 0.00042 34.9 6.9 102 382-499 16-132 (242)
258 2pv7_A T-protein [includes: ch 65.7 17 0.00057 36.4 8.2 32 385-428 22-54 (298)
259 3ek2_A Enoyl-(acyl-carrier-pro 65.7 8.1 0.00028 36.9 5.7 81 379-475 9-103 (271)
260 2nvu_B Maltose binding protein 65.7 4.5 0.00015 46.3 4.5 35 383-428 410-444 (805)
261 3l4b_C TRKA K+ channel protien 65.6 5.2 0.00018 37.8 4.2 92 386-500 2-100 (218)
262 2ahr_A Putative pyrroline carb 65.6 5.3 0.00018 38.6 4.4 90 385-502 4-93 (259)
263 3klj_A NAD(FAD)-dependent dehy 65.5 6.6 0.00022 40.8 5.4 36 384-431 9-44 (385)
264 3fg2_P Putative rubredoxin red 65.1 5.7 0.00019 41.0 4.8 37 385-431 2-38 (404)
265 3ef6_A Toluene 1,2-dioxygenase 64.8 10 0.00036 39.2 6.7 37 385-431 3-39 (410)
266 3alj_A 2-methyl-3-hydroxypyrid 64.8 6.1 0.00021 40.1 4.8 38 381-430 8-45 (379)
267 2yjz_A Metalloreductase steap4 68.5 1.4 4.6E-05 42.3 0.0 92 382-502 17-108 (201)
268 3fpc_A NADP-dependent alcohol 64.8 7.2 0.00025 39.6 5.4 50 367-428 151-200 (352)
269 1f8f_A Benzyl alcohol dehydrog 64.4 28 0.00095 35.5 9.7 50 367-427 174-223 (371)
270 3f8d_A Thioredoxin reductase ( 64.4 6 0.00021 38.1 4.5 33 384-428 15-47 (323)
271 2zbw_A Thioredoxin reductase; 63.9 6.1 0.00021 38.8 4.5 34 384-429 5-38 (335)
272 1uzm_A 3-oxoacyl-[acyl-carrier 63.7 18 0.00062 34.6 7.8 79 378-475 9-92 (247)
273 3oz2_A Digeranylgeranylglycero 63.7 5.9 0.0002 39.2 4.4 31 386-428 6-36 (397)
274 3lzw_A Ferredoxin--NADP reduct 63.5 6.4 0.00022 38.2 4.5 33 384-428 7-39 (332)
275 2yy7_A L-threonine dehydrogena 62.6 8 0.00027 37.5 5.0 98 385-498 3-117 (312)
276 3lxd_A FAD-dependent pyridine 62.5 6.3 0.00022 40.7 4.6 38 383-430 8-45 (415)
277 3h8l_A NADH oxidase; membrane 62.4 6.9 0.00024 40.2 4.8 36 385-429 2-37 (409)
278 1hxh_A 3BETA/17BETA-hydroxyste 62.2 14 0.00049 35.4 6.7 77 381-475 3-91 (253)
279 3ec7_A Putative dehydrogenase; 62.1 4.6 0.00016 41.5 3.4 97 381-496 20-116 (357)
280 2ywl_A Thioredoxin reductase r 62.0 7.7 0.00026 34.9 4.5 32 385-428 2-33 (180)
281 2cvz_A Dehydrogenase, 3-hydrox 61.9 6 0.00021 38.5 4.0 30 386-428 3-32 (289)
282 1ygy_A PGDH, D-3-phosphoglycer 61.8 24 0.00082 38.7 9.2 120 351-499 88-232 (529)
283 3c96_A Flavin-containing monoo 61.8 7.7 0.00026 39.8 5.0 35 384-429 4-38 (410)
284 3e48_A Putative nucleoside-dip 61.7 12 0.00042 36.0 6.2 97 386-499 2-106 (289)
285 2jae_A L-amino acid oxidase; o 61.6 7 0.00024 41.0 4.7 42 377-430 4-45 (489)
286 2dkn_A 3-alpha-hydroxysteroid 61.5 11 0.00039 35.1 5.8 69 386-476 3-74 (255)
287 3axb_A Putative oxidoreductase 61.4 7.6 0.00026 40.2 4.9 38 379-427 18-55 (448)
288 3nix_A Flavoprotein/dehydrogen 61.0 10 0.00035 38.6 5.7 35 384-430 5-39 (421)
289 1tt5_A APPBP1, amyloid protein 60.9 4.4 0.00015 44.9 3.2 37 381-428 29-65 (531)
290 3dme_A Conserved exported prot 60.9 7.7 0.00026 38.1 4.6 33 384-428 4-36 (369)
291 3itj_A Thioredoxin reductase 1 60.9 5.7 0.00019 38.7 3.6 33 384-428 22-54 (338)
292 3ew7_A LMO0794 protein; Q8Y8U8 60.7 24 0.0008 32.2 7.6 91 386-499 2-103 (221)
293 2vou_A 2,6-dihydroxypyridine h 60.6 9 0.00031 39.1 5.3 35 383-429 4-38 (397)
294 2xdo_A TETX2 protein; tetracyc 60.6 7.6 0.00026 39.7 4.7 36 382-429 24-59 (398)
295 1vl0_A DTDP-4-dehydrorhamnose 60.0 9.8 0.00034 36.7 5.2 88 381-499 9-113 (292)
296 1ryi_A Glycine oxidase; flavop 60.0 7.8 0.00027 38.8 4.6 35 384-430 17-51 (382)
297 2q7v_A Thioredoxin reductase; 59.7 8 0.00027 37.9 4.5 33 384-428 8-40 (325)
298 1pqw_A Polyketide synthase; ro 59.7 23 0.00079 32.4 7.4 50 367-428 22-72 (198)
299 3sc6_A DTDP-4-dehydrorhamnose 59.6 7.1 0.00024 37.6 4.1 83 386-499 7-106 (287)
300 3i1j_A Oxidoreductase, short c 59.6 28 0.00095 32.8 8.2 38 380-428 10-47 (247)
301 1y56_B Sarcosine oxidase; dehy 59.4 8 0.00027 38.8 4.5 34 384-429 5-38 (382)
302 3rp8_A Flavoprotein monooxygen 59.4 8.6 0.0003 39.2 4.9 36 382-429 21-56 (407)
303 2x4g_A Nucleoside-diphosphate- 59.2 23 0.00077 34.8 7.7 97 385-499 14-126 (342)
304 2q1s_A Putative nucleotide sug 59.0 14 0.00046 37.5 6.2 103 381-499 29-151 (377)
305 2x3n_A Probable FAD-dependent 58.7 7.8 0.00027 39.4 4.4 34 384-429 6-39 (399)
306 1hdc_A 3-alpha, 20 beta-hydrox 58.6 11 0.00039 36.2 5.3 77 381-475 2-90 (254)
307 3r9u_A Thioredoxin reductase; 58.6 8.5 0.00029 37.0 4.4 33 384-428 4-37 (315)
308 2gf3_A MSOX, monomeric sarcosi 58.4 8.6 0.00029 38.5 4.5 35 385-431 4-38 (389)
309 2d8a_A PH0655, probable L-thre 58.3 10 0.00035 38.4 5.1 48 367-427 153-200 (348)
310 3sxp_A ADP-L-glycero-D-mannohe 58.3 21 0.00072 35.7 7.4 108 380-499 6-138 (362)
311 2wm3_A NMRA-like family domain 58.2 5.7 0.00019 38.7 3.1 99 384-500 5-115 (299)
312 1yvv_A Amine oxidase, flavin-c 58.2 9 0.00031 37.5 4.6 33 385-429 3-35 (336)
313 2nu8_A Succinyl-COA ligase [AD 58.1 19 0.00066 36.3 7.1 86 384-495 7-93 (288)
314 3cgv_A Geranylgeranyl reductas 57.9 7 0.00024 39.1 3.8 35 384-430 4-38 (397)
315 3ab1_A Ferredoxin--NADP reduct 57.9 9.1 0.00031 38.2 4.6 35 383-429 13-47 (360)
316 2q0l_A TRXR, thioredoxin reduc 57.9 9 0.00031 37.1 4.5 33 385-428 2-34 (311)
317 4eqs_A Coenzyme A disulfide re 57.8 8.5 0.00029 40.6 4.6 34 386-429 2-35 (437)
318 3pid_A UDP-glucose 6-dehydroge 57.7 24 0.00082 38.2 8.1 44 465-514 146-189 (432)
319 2gqw_A Ferredoxin reductase; f 57.7 11 0.00038 39.1 5.4 38 384-431 7-44 (408)
320 3cty_A Thioredoxin reductase; 57.5 9.2 0.00031 37.4 4.5 33 384-428 16-48 (319)
321 1ek6_A UDP-galactose 4-epimera 57.3 14 0.00049 36.4 5.9 103 385-499 3-132 (348)
322 1sb8_A WBPP; epimerase, 4-epim 57.3 14 0.00047 36.8 5.9 101 382-499 25-153 (352)
323 1xq6_A Unknown protein; struct 57.2 15 0.00051 34.1 5.7 101 382-499 2-133 (253)
324 3i3l_A Alkylhalidase CMLS; fla 57.2 14 0.0005 40.9 6.5 38 382-431 21-58 (591)
325 3k7m_X 6-hydroxy-L-nicotine ox 57.2 9.5 0.00032 39.0 4.7 32 386-429 3-34 (431)
326 3k31_A Enoyl-(acyl-carrier-pro 57.2 19 0.00065 35.7 6.8 81 379-475 25-119 (296)
327 2zcu_A Uncharacterized oxidore 57.0 9.2 0.00031 36.6 4.3 98 386-499 1-104 (286)
328 2c5a_A GDP-mannose-3', 5'-epim 57.0 38 0.0013 34.3 9.2 98 384-499 29-145 (379)
329 1zk7_A HGII, reductase, mercur 56.9 10 0.00034 40.0 4.9 33 384-428 4-36 (467)
330 3tzq_B Short-chain type dehydr 56.9 14 0.00046 36.1 5.6 78 380-475 7-96 (271)
331 3cmm_A Ubiquitin-activating en 56.9 9.4 0.00032 45.6 5.2 37 381-428 24-60 (1015)
332 2vdc_G Glutamate synthase [NAD 56.9 11 0.00036 40.5 5.2 34 383-428 121-154 (456)
333 3iwa_A FAD-dependent pyridine 56.8 7.3 0.00025 41.1 3.9 37 384-430 3-39 (472)
334 2gag_B Heterotetrameric sarcos 56.5 11 0.00037 37.9 4.9 36 384-429 21-56 (405)
335 2q2v_A Beta-D-hydroxybutyrate 56.5 11 0.00039 36.1 4.9 37 381-428 1-37 (255)
336 3dje_A Fructosyl amine: oxygen 56.4 10 0.00034 39.1 4.8 37 384-431 6-42 (438)
337 4gqa_A NAD binding oxidoreduct 56.1 9.2 0.00031 39.8 4.4 112 372-494 13-129 (412)
338 3ruf_A WBGU; rossmann fold, UD 56.0 8.5 0.00029 38.2 4.0 101 382-499 23-151 (351)
339 2gv8_A Monooxygenase; FMO, FAD 55.9 10 0.00034 39.7 4.7 36 383-428 5-40 (447)
340 3un1_A Probable oxidoreductase 55.9 36 0.0012 33.0 8.4 76 382-475 26-107 (260)
341 1c0p_A D-amino acid oxidase; a 55.7 12 0.00041 37.4 5.1 34 384-429 6-39 (363)
342 4a7p_A UDP-glucose dehydrogena 55.7 39 0.0013 36.5 9.4 33 384-428 8-40 (446)
343 1k0i_A P-hydroxybenzoate hydro 55.6 11 0.00039 38.0 5.0 33 385-429 3-35 (394)
344 3gaf_A 7-alpha-hydroxysteroid 55.4 28 0.00097 33.5 7.6 78 380-475 8-100 (256)
345 2uzz_A N-methyl-L-tryptophan o 55.4 9.4 0.00032 38.0 4.2 35 385-431 3-37 (372)
346 3sx6_A Sulfide-quinone reducta 55.3 11 0.00037 39.4 4.9 36 385-429 5-40 (437)
347 1np3_A Ketol-acid reductoisome 55.3 13 0.00043 38.2 5.3 87 383-496 15-104 (338)
348 3grf_A Ornithine carbamoyltran 55.2 38 0.0013 35.5 8.9 131 321-470 96-240 (328)
349 3urh_A Dihydrolipoyl dehydroge 55.0 10 0.00035 40.3 4.7 34 384-429 25-58 (491)
350 3uuw_A Putative oxidoreductase 55.0 8.3 0.00028 38.4 3.8 91 382-496 4-95 (308)
351 3tpc_A Short chain alcohol deh 55.0 35 0.0012 32.6 8.1 77 381-475 4-92 (257)
352 3ktd_A Prephenate dehydrogenas 54.8 16 0.00056 38.0 6.1 91 385-499 9-101 (341)
353 4ej6_A Putative zinc-binding d 54.4 27 0.00093 35.8 7.7 92 359-474 159-263 (370)
354 2cul_A Glucose-inhibited divis 54.4 12 0.00039 35.7 4.5 33 384-428 3-35 (232)
355 2o7s_A DHQ-SDH PR, bifunctiona 54.4 14 0.00049 40.2 5.8 36 381-428 361-396 (523)
356 4hkt_A Inositol 2-dehydrogenas 54.3 10 0.00036 38.1 4.4 89 385-496 4-92 (331)
357 2eq6_A Pyruvate dehydrogenase 54.0 9.3 0.00032 40.4 4.2 35 383-429 5-39 (464)
358 1dxl_A Dihydrolipoamide dehydr 54.0 13 0.00043 39.0 5.1 33 384-428 6-38 (470)
359 3n74_A 3-ketoacyl-(acyl-carrie 54.0 10 0.00036 36.2 4.2 78 380-475 5-94 (261)
360 3gg2_A Sugar dehydrogenase, UD 54.0 11 0.00039 40.5 4.9 32 385-428 3-34 (450)
361 2oln_A NIKD protein; flavoprot 53.9 12 0.0004 38.0 4.7 35 385-431 5-39 (397)
362 3uox_A Otemo; baeyer-villiger 53.8 12 0.00042 40.9 5.2 35 383-429 8-42 (545)
363 1vdc_A NTR, NADPH dependent th 53.8 9.2 0.00032 37.4 3.8 33 383-427 7-39 (333)
364 3qvo_A NMRA family protein; st 53.7 20 0.00067 33.9 6.0 101 382-499 21-125 (236)
365 1o5i_A 3-oxoacyl-(acyl carrier 53.6 49 0.0017 31.6 8.9 76 380-475 15-92 (249)
366 2dtx_A Glucose 1-dehydrogenase 53.6 55 0.0019 31.7 9.3 76 381-475 5-85 (264)
367 2xve_A Flavin-containing monoo 53.4 11 0.00038 40.0 4.6 38 385-428 3-40 (464)
368 2r9z_A Glutathione amide reduc 53.3 11 0.00038 39.8 4.6 33 384-428 4-36 (463)
369 3r1i_A Short-chain type dehydr 53.2 42 0.0014 32.9 8.5 78 380-475 28-120 (276)
370 3kd9_A Coenzyme A disulfide re 53.2 11 0.00036 39.6 4.4 36 384-429 3-38 (449)
371 3p19_A BFPVVD8, putative blue 53.2 18 0.0006 35.4 5.7 82 379-475 11-98 (266)
372 3oig_A Enoyl-[acyl-carrier-pro 53.1 28 0.00096 33.4 7.1 80 380-475 3-98 (266)
373 3dfz_A SIRC, precorrin-2 dehyd 52.9 11 0.00038 37.2 4.2 36 381-428 28-63 (223)
374 3f1l_A Uncharacterized oxidore 52.7 36 0.0012 32.6 7.8 38 380-428 8-45 (252)
375 4g6h_A Rotenone-insensitive NA 52.6 6.2 0.00021 42.7 2.5 32 385-428 43-74 (502)
376 4ep1_A Otcase, ornithine carba 52.5 70 0.0024 33.7 10.4 131 321-474 121-257 (340)
377 1dlj_A UDP-glucose dehydrogena 52.5 15 0.0005 38.7 5.4 30 386-428 2-31 (402)
378 1zk4_A R-specific alcohol dehy 52.4 12 0.00039 35.4 4.1 38 380-428 2-39 (251)
379 2ydy_A Methionine adenosyltran 52.4 27 0.00093 33.9 6.9 92 384-499 2-110 (315)
380 1xg5_A ARPG836; short chain de 52.3 38 0.0013 32.7 7.9 36 382-428 30-65 (279)
381 3e03_A Short chain dehydrogena 52.2 55 0.0019 31.8 9.1 37 381-428 3-39 (274)
382 3m6i_A L-arabinitol 4-dehydrog 52.1 17 0.0006 36.8 5.7 58 358-427 155-212 (363)
383 2ehd_A Oxidoreductase, oxidore 52.1 31 0.0011 32.2 7.1 74 384-475 5-89 (234)
384 3moi_A Probable dehydrogenase; 52.0 8.1 0.00028 40.0 3.2 89 385-495 3-92 (387)
385 3dqp_A Oxidoreductase YLBE; al 51.8 23 0.00078 32.8 6.0 94 386-499 2-106 (219)
386 1rpn_A GDP-mannose 4,6-dehydra 51.6 31 0.0011 33.8 7.2 104 382-499 12-138 (335)
387 2hqm_A GR, grase, glutathione 51.6 11 0.00038 39.9 4.3 34 383-428 10-43 (479)
388 3s5w_A L-ornithine 5-monooxyge 51.6 11 0.00039 39.1 4.3 40 384-430 30-69 (463)
389 1yb1_A 17-beta-hydroxysteroid 51.6 47 0.0016 32.1 8.4 38 380-428 27-64 (272)
390 1fmc_A 7 alpha-hydroxysteroid 51.6 22 0.00076 33.4 6.0 37 381-428 8-44 (255)
391 1t2a_A GDP-mannose 4,6 dehydra 51.6 34 0.0012 34.3 7.7 101 385-499 25-156 (375)
392 1rkx_A CDP-glucose-4,6-dehydra 51.5 27 0.00093 34.7 6.9 102 382-499 7-132 (357)
393 3v76_A Flavoprotein; structura 51.5 12 0.0004 39.6 4.4 35 384-430 27-61 (417)
394 3h28_A Sulfide-quinone reducta 51.5 13 0.00044 38.7 4.7 35 385-429 3-37 (430)
395 2qcu_A Aerobic glycerol-3-phos 51.4 12 0.00043 39.9 4.7 34 384-429 3-36 (501)
396 2wpf_A Trypanothione reductase 51.4 15 0.00053 39.3 5.4 32 384-426 7-38 (495)
397 4a2c_A Galactitol-1-phosphate 51.4 40 0.0014 33.7 8.1 55 361-427 139-193 (346)
398 3rkr_A Short chain oxidoreduct 51.3 40 0.0014 32.4 7.9 76 381-474 26-116 (262)
399 4ap3_A Steroid monooxygenase; 51.2 12 0.0004 41.1 4.5 35 383-429 20-54 (549)
400 3h7a_A Short chain dehydrogena 51.2 41 0.0014 32.3 8.0 77 381-475 4-94 (252)
401 3nrn_A Uncharacterized protein 51.2 14 0.00049 37.8 4.9 33 386-430 2-34 (421)
402 3ka7_A Oxidoreductase; structu 51.0 14 0.00049 37.5 4.8 32 386-429 2-33 (425)
403 1mo9_A ORF3; nucleotide bindin 50.8 12 0.00042 40.2 4.6 35 383-429 42-76 (523)
404 4hv4_A UDP-N-acetylmuramate--L 50.8 19 0.00066 38.9 6.1 107 384-526 22-130 (494)
405 2qae_A Lipoamide, dihydrolipoy 50.6 13 0.00045 39.1 4.6 34 384-429 2-35 (468)
406 1qsg_A Enoyl-[acyl-carrier-pro 50.5 17 0.00058 35.0 5.1 78 382-475 7-98 (265)
407 3oqb_A Oxidoreductase; structu 50.4 11 0.00038 38.7 3.9 96 382-496 4-112 (383)
408 1q1r_A Putidaredoxin reductase 50.4 15 0.00053 38.4 5.1 37 384-430 4-40 (431)
409 3ntd_A FAD-dependent pyridine 50.3 17 0.00057 39.0 5.5 37 385-431 2-38 (565)
410 4gcm_A TRXR, thioredoxin reduc 50.2 13 0.00046 36.2 4.3 32 385-428 7-38 (312)
411 3st7_A Capsular polysaccharide 50.1 40 0.0014 33.9 7.9 79 386-499 2-94 (369)
412 2pnf_A 3-oxoacyl-[acyl-carrier 50.1 38 0.0013 31.6 7.3 38 380-428 3-40 (248)
413 2d1y_A Hypothetical protein TT 50.0 34 0.0012 32.8 7.1 79 381-475 3-88 (256)
414 3k30_A Histamine dehydrogenase 50.0 16 0.00056 40.8 5.5 34 384-429 391-424 (690)
415 3uko_A Alcohol dehydrogenase c 50.0 30 0.001 35.4 7.1 44 373-427 183-226 (378)
416 1m6i_A Programmed cell death p 49.8 16 0.00054 39.2 5.1 38 383-430 10-47 (493)
417 2zb4_A Prostaglandin reductase 49.8 29 0.001 35.1 6.9 56 362-428 137-195 (357)
418 1nff_A Putative oxidoreductase 49.6 28 0.00094 33.7 6.4 78 380-475 3-92 (260)
419 1pl8_A Human sorbitol dehydrog 49.6 23 0.00078 36.0 6.1 49 367-427 156-204 (356)
420 2a8x_A Dihydrolipoyl dehydroge 49.6 12 0.00042 39.2 4.2 33 384-428 3-35 (464)
421 3qiv_A Short-chain dehydrogena 49.5 29 0.00098 32.9 6.4 77 380-474 5-96 (253)
422 2yqu_A 2-oxoglutarate dehydrog 49.5 14 0.00046 38.8 4.5 33 385-429 2-34 (455)
423 2fwm_X 2,3-dihydro-2,3-dihydro 49.5 67 0.0023 30.6 9.1 77 381-475 4-85 (250)
424 3grk_A Enoyl-(acyl-carrier-pro 49.4 20 0.00068 35.5 5.5 80 380-475 27-120 (293)
425 1fl2_A Alkyl hydroperoxide red 49.4 13 0.00044 36.0 4.0 32 385-428 2-33 (310)
426 1iy8_A Levodione reductase; ox 49.3 37 0.0013 32.7 7.3 38 380-428 9-46 (267)
427 2e4g_A Tryptophan halogenase; 49.2 15 0.00051 39.9 4.9 38 384-430 25-62 (550)
428 2bc0_A NADH oxidase; flavoprot 49.1 16 0.00056 38.8 5.1 37 384-429 35-71 (490)
429 3cgb_A Pyridine nucleotide-dis 49.0 12 0.00042 39.6 4.1 63 359-431 8-73 (480)
430 2aqj_A Tryptophan halogenase, 49.0 14 0.00049 39.6 4.7 37 384-429 5-41 (538)
431 1zmd_A Dihydrolipoyl dehydroge 49.0 14 0.00048 38.9 4.5 34 384-429 6-39 (474)
432 3mz0_A Inositol 2-dehydrogenas 48.9 23 0.0008 35.8 6.0 93 385-496 3-95 (344)
433 4dry_A 3-oxoacyl-[acyl-carrier 48.9 20 0.00068 35.3 5.4 79 379-475 28-122 (281)
434 2gn4_A FLAA1 protein, UDP-GLCN 48.9 15 0.00051 37.2 4.6 101 380-499 17-142 (344)
435 2v3a_A Rubredoxin reductase; a 48.9 13 0.00046 37.8 4.2 35 384-428 4-38 (384)
436 4gde_A UDP-galactopyranose mut 48.8 17 0.00057 38.0 5.0 23 384-406 10-32 (513)
437 1yqd_A Sinapyl alcohol dehydro 48.8 35 0.0012 34.9 7.4 49 367-427 171-219 (366)
438 2ew2_A 2-dehydropantoate 2-red 48.6 16 0.00055 35.6 4.6 98 385-503 4-112 (316)
439 1ebd_A E3BD, dihydrolipoamide 48.6 13 0.00045 38.9 4.2 32 385-428 4-35 (455)
440 1ges_A Glutathione reductase; 48.6 12 0.0004 39.5 3.8 33 384-428 4-36 (450)
441 3sx2_A Putative 3-ketoacyl-(ac 48.5 47 0.0016 32.1 7.9 39 379-428 8-46 (278)
442 1gy8_A UDP-galactose 4-epimera 48.5 27 0.00094 35.1 6.4 45 454-498 82-143 (397)
443 2weu_A Tryptophan 5-halogenase 48.5 11 0.00039 39.9 3.8 37 385-430 3-39 (511)
444 3d6n_B Aspartate carbamoyltran 48.4 1.8E+02 0.0062 29.8 12.6 127 321-474 85-215 (291)
445 2nm0_A Probable 3-oxacyl-(acyl 48.4 48 0.0016 32.0 7.9 77 380-475 17-98 (253)
446 2p2s_A Putative oxidoreductase 48.3 33 0.0011 34.4 7.0 84 383-487 3-88 (336)
447 1rsg_A FMS1 protein; FAD bindi 48.2 5 0.00017 42.8 0.9 25 382-406 6-30 (516)
448 4imr_A 3-oxoacyl-(acyl-carrier 48.2 74 0.0025 31.1 9.4 77 381-475 30-120 (275)
449 3ko8_A NAD-dependent epimerase 48.1 42 0.0014 32.5 7.5 94 386-499 2-113 (312)
450 3tpf_A Otcase, ornithine carba 48.0 1.1E+02 0.0037 31.8 10.8 129 321-472 87-222 (307)
451 1w4x_A Phenylacetone monooxyge 47.9 16 0.00056 39.4 5.0 36 382-429 14-49 (542)
452 1onf_A GR, grase, glutathione 47.9 14 0.00049 39.4 4.4 33 385-429 3-35 (500)
453 3v8b_A Putative dehydrogenase, 47.7 40 0.0014 33.2 7.3 77 381-475 25-116 (283)
454 2a87_A TRXR, TR, thioredoxin r 47.6 14 0.00047 36.6 4.0 34 383-428 13-46 (335)
455 3evn_A Oxidoreductase, GFO/IDH 47.6 21 0.00073 35.9 5.5 93 383-496 4-96 (329)
456 1trb_A Thioredoxin reductase; 47.5 8.6 0.00029 37.4 2.4 34 383-428 4-37 (320)
457 2x6t_A ADP-L-glycero-D-manno-h 47.4 30 0.001 34.5 6.5 102 382-499 44-163 (357)
458 3uog_A Alcohol dehydrogenase; 47.4 17 0.0006 37.0 4.8 44 372-427 178-221 (363)
459 3ak4_A NADH-dependent quinucli 47.3 24 0.00082 33.8 5.6 77 381-475 9-97 (263)
460 2jl1_A Triphenylmethane reduct 47.2 9.9 0.00034 36.5 2.8 99 385-499 1-107 (287)
461 3rih_A Short chain dehydrogena 47.2 46 0.0016 33.1 7.8 78 380-475 37-130 (293)
462 1lvl_A Dihydrolipoamide dehydr 47.1 16 0.00054 38.6 4.6 33 384-428 5-37 (458)
463 3rwb_A TPLDH, pyridoxal 4-dehy 47.1 23 0.00078 34.0 5.4 78 380-475 2-91 (247)
464 3op4_A 3-oxoacyl-[acyl-carrier 47.0 16 0.00056 35.0 4.3 77 381-475 6-94 (248)
465 2zat_A Dehydrogenase/reductase 46.8 60 0.0021 30.9 8.3 39 379-428 9-47 (260)
466 2qa2_A CABE, polyketide oxygen 46.8 16 0.00055 39.3 4.6 34 383-428 11-44 (499)
467 3ihm_A Styrene monooxygenase A 46.8 15 0.0005 38.4 4.2 32 385-428 23-54 (430)
468 2bry_A NEDD9 interacting prote 46.8 17 0.00059 39.0 4.9 37 383-431 91-127 (497)
469 3tsc_A Putative oxidoreductase 46.8 51 0.0017 31.9 7.8 39 380-429 7-45 (277)
470 3o0h_A Glutathione reductase; 46.8 17 0.00059 38.5 4.8 33 384-428 26-58 (484)
471 3tox_A Short chain dehydrogena 46.7 34 0.0012 33.7 6.6 77 381-475 5-96 (280)
472 1lqt_A FPRA; NADP+ derivative, 46.7 17 0.00059 38.7 4.8 38 384-428 3-42 (456)
473 3lad_A Dihydrolipoamide dehydr 46.6 19 0.00064 37.9 5.0 33 384-428 3-35 (476)
474 3l8k_A Dihydrolipoyl dehydroge 46.5 17 0.00059 38.3 4.7 35 384-430 4-38 (466)
475 2hcy_A Alcohol dehydrogenase 1 46.5 35 0.0012 34.4 6.9 44 371-427 158-202 (347)
476 4b63_A L-ornithine N5 monooxyg 46.3 11 0.00039 40.4 3.4 22 386-407 41-62 (501)
477 4eez_A Alcohol dehydrogenase 1 46.2 47 0.0016 33.2 7.7 47 369-427 150-196 (348)
478 3t7c_A Carveol dehydrogenase; 46.2 89 0.003 30.8 9.6 38 380-428 24-61 (299)
479 3oc4_A Oxidoreductase, pyridin 46.2 20 0.00067 37.6 5.1 36 385-430 3-38 (452)
480 1fjh_A 3alpha-hydroxysteroid d 46.2 36 0.0012 32.1 6.6 70 385-475 2-73 (257)
481 3awd_A GOX2181, putative polyo 46.0 33 0.0011 32.5 6.2 37 381-428 10-46 (260)
482 4a5l_A Thioredoxin reductase; 46.0 14 0.00049 35.6 3.8 31 386-428 6-36 (314)
483 2fzw_A Alcohol dehydrogenase c 45.9 42 0.0014 34.1 7.4 44 373-427 180-223 (373)
484 3pxx_A Carveol dehydrogenase; 45.9 50 0.0017 31.8 7.6 37 381-428 7-43 (287)
485 2qa1_A PGAE, polyketide oxygen 45.8 16 0.00056 39.2 4.5 35 382-428 9-43 (500)
486 3euw_A MYO-inositol dehydrogen 45.7 31 0.0011 34.7 6.3 90 385-496 5-94 (344)
487 2bi7_A UDP-galactopyranose mut 45.5 18 0.00062 37.4 4.7 34 384-429 3-36 (384)
488 3uve_A Carveol dehydrogenase ( 45.5 44 0.0015 32.5 7.2 38 380-428 7-44 (286)
489 1kyq_A Met8P, siroheme biosynt 45.5 13 0.00046 37.8 3.6 36 381-428 10-45 (274)
490 1udb_A Epimerase, UDP-galactos 45.4 37 0.0013 33.4 6.7 99 386-499 2-124 (338)
491 1p0f_A NADP-dependent alcohol 45.4 43 0.0015 34.1 7.4 37 380-427 188-224 (373)
492 3qj4_A Renalase; FAD/NAD(P)-bi 45.2 13 0.00044 37.0 3.3 35 385-428 2-36 (342)
493 4eye_A Probable oxidoreductase 45.2 23 0.00078 35.9 5.2 47 369-427 145-192 (342)
494 1xhc_A NADH oxidase /nitrite r 45.1 13 0.00045 38.1 3.5 35 384-431 8-42 (367)
495 1v59_A Dihydrolipoamide dehydr 45.1 19 0.00065 37.9 4.8 34 384-429 5-38 (478)
496 1vl8_A Gluconate 5-dehydrogena 45.0 85 0.0029 30.3 9.2 38 380-428 17-54 (267)
497 3c4n_A Uncharacterized protein 45.0 20 0.00068 36.9 4.8 35 385-429 37-71 (405)
498 3gwf_A Cyclohexanone monooxyge 44.9 15 0.00052 40.1 4.2 36 383-429 7-42 (540)
499 1nhp_A NADH peroxidase; oxidor 44.7 15 0.00053 38.3 4.0 35 386-430 2-36 (447)
500 3c4a_A Probable tryptophan hyd 44.7 20 0.00068 36.4 4.7 33 386-428 2-34 (381)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=6.8e-206 Score=1666.12 Aligned_cols=540 Identities=53% Similarity=0.934 Sum_probs=532.4
Q ss_pred ccccccccCcCCccCCCCCHHHHhccccCCCCCCcccCHHHHHHHHHHHHhccCCchhHHHHHHHHHHhhHHHHHHHhhh
Q 006454 102 ASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLID 181 (644)
Q Consensus 102 ~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFY~ll~~ 181 (644)
++|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+||++++++|+||+||++||++||+||||++++
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchhhHHHHHHHhhhhcCCCccccccCCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCcccccchh
Q 006454 182 NVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVG 261 (644)
Q Consensus 182 ~~ee~lPivYTPtVG~acq~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 261 (644)
|++|+|||+||||||++|++||+|||+|+|+|||++|+|+++++++|||.++|+|||||||||||||||||++|||||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhcCCCCCceeeeeecCCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCCccceecccCCCCc
Q 006454 262 KLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHN 341 (644)
Q Consensus 262 Kl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~n 341 (644)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+++|||+++|| ||||+++|
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~-~EDf~~~~ 239 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQ-FEDFANAN 239 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEE-ECSCCHHH
T ss_pred HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEe-ecccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHcCCCceeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCe
Q 006454 342 AFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKK 421 (644)
Q Consensus 342 Af~lL~ryr~~~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~ 421 (644)
||++|+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++
T Consensus 240 af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~ 318 (555)
T 1gq2_A 240 AFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKR 318 (555)
T ss_dssp HHHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTT
T ss_pred HHHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999985 9999999999
Q ss_pred EEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 006454 422 IWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNP 501 (644)
Q Consensus 422 i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNP 501 (644)
|||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||||||++|+++|+||||||||||
T Consensus 319 i~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNP 397 (555)
T 1gq2_A 319 IWMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNP 397 (555)
T ss_dssp EEEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSS
T ss_pred EEEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCC
Confidence 999999999999996 5999999999987778899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHhcccCCcEEEeeCCCCCCccc-CCeeecccCCCccccchhhhHHHHHhCCcccCHHHHHHHHHHHHccc
Q 006454 502 TSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQV 580 (644)
Q Consensus 502 ts~aEct~edA~~wT~GraifASGSPF~pV~~-~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v 580 (644)
|+++|||||||++||+|+|||||||||+||+| +||+++|||+||+|||||||||+++++|++|||+|+++||+|||+++
T Consensus 398 t~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~alA~~v 477 (555)
T 1gq2_A 398 TSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEV 477 (555)
T ss_dssp GGGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTC
T ss_pred CCccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCCCCCC
Q 006454 581 TQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 644 (644)
Q Consensus 581 ~~e~~~~g~l~P~~~~ir~vs~~IA~aVa~~A~~~GlA~~~~~p~dl~~~i~~~m~~P~Y~~~~ 644 (644)
+++++..+.|||++++||+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|+|++|+
T Consensus 478 ~~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~P~Y~~~~ 541 (555)
T 1gq2_A 478 SEENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCFV 541 (555)
T ss_dssp CHHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHTTSCCCSCCCCS
T ss_pred ccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCCcc
Confidence 9999999999999999999999999999999999999998788899999999999999999874
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=5.6e-205 Score=1663.02 Aligned_cols=541 Identities=50% Similarity=0.911 Sum_probs=532.8
Q ss_pred ccccccccCcCCccCCCCCHHHHhccccCCCCCCcccCHHHHHHHHHHHHhccCCchhHHHHHHHHHHhhHHHHHHHhhh
Q 006454 102 ASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLID 181 (644)
Q Consensus 102 ~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFY~ll~~ 181 (644)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+||++++++|+||+||++||++||+|||||+++
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchhhHHHHHHHhhhhcCCCccccccCCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCcccccchh
Q 006454 182 NVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVG 261 (644)
Q Consensus 182 ~~ee~lPivYTPtVG~acq~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 261 (644)
|++|+|||+||||||++|++||+|||+|+|+|||++|+|+|+++|+|||.++|+|||||||||||||||||++||+||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhcCCCCCceeeeeecCCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCCccceecccCCCCc
Q 006454 262 KLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHN 341 (644)
Q Consensus 262 Kl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~n 341 (644)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+++|||+++|| ||||+++|
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~-~EDf~~~~ 241 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQ-FEDFGNHN 241 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEE-ECSCCHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEe-ehhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHcCCCceeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCe
Q 006454 342 AFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKK 421 (644)
Q Consensus 342 Af~lL~ryr~~~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~ 421 (644)
||++|+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++
T Consensus 242 af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~ 320 (564)
T 1pj3_A 242 AFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVEN-GLSEQEAQKK 320 (564)
T ss_dssp HHHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHT-TCCHHHHHHT
T ss_pred HHHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHc-CCChHHhhCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999984 9999999999
Q ss_pred EEEEccCCcccCCCccCCchhhhhhccccCCC--CCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 006454 422 IWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 422 i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 499 (644)
|||||++|||+++|.++|+++|++||++.++. ++|+|||+.+|||||||+|+++|+||||||++|+++|+||||||||
T Consensus 321 i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS 400 (564)
T 1pj3_A 321 IWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALS 400 (564)
T ss_dssp EEEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECC
T ss_pred EEEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECC
Confidence 99999999999999445999999999987776 7999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHhcccCCcEEEeeCCCCCCccc-CCeeecccCCCccccchhhhHHHHHhCCcccCHHHHHHHHHHHHc
Q 006454 500 NPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAG 578 (644)
Q Consensus 500 NPts~aEct~edA~~wT~GraifASGSPF~pV~~-~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~ 578 (644)
|||+++|||||||++||+|+|||||||||+||+| +||+|+|||+||+|||||||||+++++|++|||+|+++||+|||+
T Consensus 401 NPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~aLA~ 480 (564)
T 1pj3_A 401 NPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTS 480 (564)
T ss_dssp SSGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHT
T ss_pred CCCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCCeECCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred ccCccCCCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCCCCCC
Q 006454 579 QVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 644 (644)
Q Consensus 579 ~v~~e~~~~g~l~P~~~~ir~vs~~IA~aVa~~A~~~GlA~~~~~p~dl~~~i~~~m~~P~Y~~~~ 644 (644)
+++++++..+.|||+++++|+||.+||.||+++|+++|+|+..++|+|+.+|+++.||+|.|++|+
T Consensus 481 ~v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~p~Y~~~~ 546 (564)
T 1pj3_A 481 QLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKERTWRSEYDSLL 546 (564)
T ss_dssp TCCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHHTCCCCSCCCCC
T ss_pred hcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHhhCCCCCCcc
Confidence 999999999999999999999999999999999999999998888899999999999999999874
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=4.1e-205 Score=1668.57 Aligned_cols=544 Identities=47% Similarity=0.847 Sum_probs=534.9
Q ss_pred ccccccccccccCcCCccCCCCCHHHHhccccCCCCCCcccCHHHHHHHHHHHHhccCCchhHHHHHHHHHHhhHHHHHH
Q 006454 98 SVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYK 177 (644)
Q Consensus 98 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFY~ 177 (644)
..+..+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 34467999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccCCcccchhhHHHHHHHhhhhcCCCccccccCCc--chHHHHHhcCCCCCeeEEEEecCceeecCCCCCCcc
Q 006454 178 LLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDK--GKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHG 255 (644)
Q Consensus 178 ll~~~~ee~lPivYTPtVG~acq~~s~i~r~p~Glyis~~d~--g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~G 255 (644)
|+++|++|+|||+||||||++|++||+|||+|+|+|||++|+ |+|+++|+|||.++|+|||||||||||||||||++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cccchhhhhhHhhhcCCCCCceeeeeecCCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCCccceecc
Q 006454 256 MGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQVFE 335 (644)
Q Consensus 256 mgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~Av~~~fGp~~lIq~fE 335 (644)
|||||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++|| ||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~-~E 271 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQ-FE 271 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEE-EC
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEee-Hh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cCCCCcHHHHHHHHcCCCceeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCCh
Q 006454 336 DFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPL 415 (644)
Q Consensus 336 Df~~~nAf~lL~ryr~~~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~ 415 (644)
||+++|||++|+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|++ .|+|+
T Consensus 272 Df~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~ 350 (605)
T 1o0s_A 272 DFANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQN-EGISK 350 (605)
T ss_dssp SCCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHT-TTCCH
T ss_pred hcCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHH-cCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997 49999
Q ss_pred hhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEE
Q 006454 416 EETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPII 495 (644)
Q Consensus 416 eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPII 495 (644)
|||+++|||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||+|||++|+++|+||||
T Consensus 351 eeA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PII 429 (605)
T 1o0s_A 351 EEACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPII 429 (605)
T ss_dssp HHHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEE
T ss_pred hhhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEE
Confidence 999999999999999999996 5999999999987778899999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCcccCCeeecccCCCccccchhhhHHHHHhCCcccCHHHHHHHHHH
Q 006454 496 FSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEA 575 (644)
Q Consensus 496 FaLSNPts~aEct~edA~~wT~GraifASGSPF~pV~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~a 575 (644)
|||||||+++|||||||++||+|+|||||||||+||+|+||+++|||+||+|||||||||+++++|++|||+|+++||+|
T Consensus 430 FaLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aAA~a 509 (605)
T 1o0s_A 430 FALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKK 509 (605)
T ss_dssp EECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHHHHH
T ss_pred EECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcCCeEcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcccCccCCCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCCCCCC
Q 006454 576 LAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 644 (644)
Q Consensus 576 LA~~v~~e~~~~g~l~P~~~~ir~vs~~IA~aVa~~A~~~GlA~~~~~p~dl~~~i~~~m~~P~Y~~~~ 644 (644)
||++++++++..|.|||++++||+||.+||.||+++|+++|+|+..++|+|+.+|+++.||+|.|++|+
T Consensus 510 LA~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~~~~d~~~~i~~~~w~P~Y~~~~ 578 (605)
T 1o0s_A 510 VASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQVYNTEYEELI 578 (605)
T ss_dssp HHHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSSCCSCHHHHHHHHSCCCSCCCCS
T ss_pred HHhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCccc
Confidence 999999999999999999999999999999999999999999998888899999999999999999874
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=1e-120 Score=980.35 Aligned_cols=379 Identities=30% Similarity=0.419 Sum_probs=344.3
Q ss_pred ccCCcccchhhHHHHHHHhhhhcCCCccccccCCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCC-cccccchhhh
Q 006454 185 ELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGC-HGMGIPVGKL 263 (644)
Q Consensus 185 e~lPivYTPtVG~acq~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~-~GmgI~iGKl 263 (644)
+.|||+||||||++|++|+ +|+++++++..+|+ +|||||||||||||||+|+ +|||||+||+
T Consensus 59 ~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kgn----~VaVVTDG~aILGLGDiG~~agmpImeGKl 121 (487)
T 3nv9_A 59 NWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRGN----FVGVVSDSTRVLGDGDVTPPGGLGVMEGKA 121 (487)
T ss_dssp GGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGGG----EEEEEECSSSBGGGBCCCGGGGHHHHHHHH
T ss_pred HHCeeeeCcchHHHHHHHH-------------hChHHHhhhcccCC----EEEEEEcCceeeeccccccccCCchhhhHH
Confidence 4599999999999999986 46777787777764 8999999999999999999 5999999999
Q ss_pred hhHhhhcCCCCCceeeeeecCCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcHH
Q 006454 264 SLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNAF 343 (644)
Q Consensus 264 ~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nAf 343 (644)
+|||+||||| |||||||+||+| +++|| |+|+ |||+++.++||. || ||||+++|||
T Consensus 122 ~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------defv-e~v~~~~P~fG~---In-lEDf~ap~af 176 (487)
T 3nv9_A 122 LLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAVI-EFVQRIQHTFGA---IN-LEDISQPNCY 176 (487)
T ss_dssp HHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHHH-HHHHHHGGGCSE---EE-ECSCCTTHHH
T ss_pred HHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHHH-HHHHHhCCCCCe---ec-HhhcCCchHH
Confidence 9999999999 999999999765 45664 3333 466666666766 99 9999999999
Q ss_pred HHHHHHcC--CCceeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCe
Q 006454 344 DLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKK 421 (644)
Q Consensus 344 ~lL~ryr~--~~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~ 421 (644)
++|+|||+ +||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+. .|+++ ++
T Consensus 177 ~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~----~~ 247 (487)
T 3nv9_A 177 KILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP----KK 247 (487)
T ss_dssp HHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG----GG
T ss_pred HHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc----cc
Confidence 99999998 799999999999999999999999999999999999999999999999999975 49986 89
Q ss_pred EEEEccCCcccCCCccCC-----chhhhhhccccC--CCCCHHHHHhccCCcEEEEccCC-CCCCCHHHHHHHHcCCCCc
Q 006454 422 IWLVDSKGLIVSSRLESL-----QHFKKPWAHEHE--PVKELVDAVNAIKPTILIGTSGQ-GRTFTKEVVEAMASLNEKP 493 (644)
Q Consensus 422 i~lvDs~GLi~~~R~~~L-----~~~k~~fA~~~~--~~~~L~eaV~~vkPtvLIG~S~~-~g~Fteevv~~Ma~~~erP 493 (644)
|||||++|||+++|.+ | .++|.+||++.. +.++|+|||+. +|||||+|++ +|+||+|+|++|+ +||
T Consensus 248 i~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma---~~P 321 (487)
T 3nv9_A 248 IVMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG---EKP 321 (487)
T ss_dssp EEEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC---SSC
T ss_pred EEEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc---CCC
Confidence 9999999999999954 6 346678888653 46799999998 7999999977 7999999999995 899
Q ss_pred EEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCcccCCeeecccCCCccccchhhhHHHHHhCCcccCHHHHHHHH
Q 006454 494 IIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAA 573 (644)
Q Consensus 494 IIFaLSNPts~aEct~edA~~wT~GraifASGSPF~pV~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA 573 (644)
||||||||| +|||||||++ +|+||||||| +++|||+||+|+|||||+|++++||++|||+|+++||
T Consensus 322 IIFaLSNPt--pEi~pe~A~~--~G~aIvATGr----------sd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~~AAA 387 (487)
T 3nv9_A 322 IVFCCANPV--PEIYPYEAKE--AGAYIVATGR----------GDFPNQVNNSVGFPGILKGALIVRARKITDNMAIAAS 387 (487)
T ss_dssp EEEECCSSS--CSSCHHHHHH--TTCSEEEESC----------TTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHHHHHH
T ss_pred EEEECCCCC--ccCCHHHHHH--hCCEEEEECC----------CCCcccCcceeEcchhhHHHHHcCCcccCHHHHHHHH
Confidence 999999999 7999999998 5999999995 5779999999999999999999999999999999999
Q ss_pred HHHHcccCccCCCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCC-CCchhHHHHHHhCC
Q 006454 574 EALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRL-PPPKDLVKYAESCM 635 (644)
Q Consensus 574 ~aLA~~v~~e~~~~g~l~P~~~~ir~vs~~IA~aVa~~A~~~GlA~~~-~~p~dl~~~i~~~m 635 (644)
++||++++++++.++.|||++++ ++||.+||.||+++|+++|+|+.. ++++++.+++++.+
T Consensus 388 ~ALA~~v~~~~l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~ 449 (487)
T 3nv9_A 388 RALAEFAEKRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDI 449 (487)
T ss_dssp HHHHHHHHHTCCBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHH
T ss_pred HHHHhhCCcccCCCCceeCCccc-cchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999 789999999999999999999976 67889999998765
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=1.2e-111 Score=899.89 Aligned_cols=361 Identities=28% Similarity=0.410 Sum_probs=331.3
Q ss_pred HHHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCccccccCCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCC
Q 006454 174 LFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGC 253 (644)
Q Consensus 174 LFY~ll~~~~ee~lPivYTPtVG~acq~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~ 253 (644)
+++++.+++.| +|||+||||||++|++|+ ++| ++++ +|+.++++|+|||||+|||||||+|+
T Consensus 24 ~~~~~~~~~~~-~l~i~YtP~V~~~c~~i~---~~p----------~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G~ 85 (398)
T 2a9f_A 24 VQPKVDIKTKH-DLSIAYTPGVASVSSAIA---KDK----------TLAY----DLTTKKNTVAVISDGTAVLGLGDIGP 85 (398)
T ss_dssp EEESSCCSSHH-HHHHHSTTTTHHHHHHHH---HCG----------GGHH----HHSGGGTEEEEEECSSSCTTSCCCCH
T ss_pred EEEecccCCHH-HCeEEECchHHHHHHHHH---hCH----------HHHH----HhcccCCEEEEEECCccccCCCCccc
Confidence 34555666655 689999999999999987 344 5544 68999999999999999999999999
Q ss_pred c-ccccchhhhhhHhhhcCCCCCceeeeeecCCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCC-ccc
Q 006454 254 H-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-ILI 331 (644)
Q Consensus 254 ~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~Av~~~fGp~-~lI 331 (644)
+ ||+||+||+.|||+||||| |+|||||+|| +||||++|+..| |. ..|
T Consensus 86 ~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~I 134 (398)
T 2a9f_A 86 EAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGGI 134 (398)
T ss_dssp HHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSEE
T ss_pred ccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeEe
Confidence 8 9999999999999999999 9999999996 699999999999 87 899
Q ss_pred eecccCCCCcHHHHHHHHcCC--CceeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHH
Q 006454 332 QVFEDFANHNAFDLLEKYGTT--HLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISK 409 (644)
Q Consensus 332 q~fEDf~~~nAf~lL~ryr~~--~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~ 409 (644)
| ||||+++|||++|+|||++ +|||||||||||+|+|||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 135 ~-lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~--- 210 (398)
T 2a9f_A 135 N-LEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA--- 210 (398)
T ss_dssp E-ECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH---
T ss_pred c-cccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc---
Confidence 9 9999999999999999975 999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCC---CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHH
Q 006454 410 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAM 486 (644)
Q Consensus 410 ~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~---~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~M 486 (644)
|+ ++||++|++|||+++|.++|+++|++||++..+ ..+|+|+|+. +|||||+|+ +|+||+|+|++|
T Consensus 211 --Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~M 279 (398)
T 2a9f_A 211 --GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKM 279 (398)
T ss_dssp --TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTS
T ss_pred --CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhh
Confidence 64 899999999999999933599999999997543 4689999998 899999999 899999999999
Q ss_pred HcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCcccCCeeecccCCCccccchhhhHHHHHhCCcccCH
Q 006454 487 ASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHD 566 (644)
Q Consensus 487 a~~~erPIIFaLSNPts~aEct~edA~~wT~GraifASGSPF~pV~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd 566 (644)
+ ++|||||||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|+++++|++|||
T Consensus 280 a---~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d 342 (398)
T 2a9f_A 280 A---ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITV 342 (398)
T ss_dssp C---SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCH
T ss_pred C---CCCEEEECCCCC--ccCCHHHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCCH
Confidence 7 899999999999 89999999999 99999999 4899999999999999999999999999999
Q ss_pred HHHHHHHHHHHcccCccCCCCCcccCCCCCchhhHHHHHHHHHHHHHHcC
Q 006454 567 DMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELG 616 (644)
Q Consensus 567 ~M~laAA~aLA~~v~~e~~~~g~l~P~~~~ir~vs~~IA~aVa~~A~~~G 616 (644)
+|+++||++||++++++++.++.|||++++ |+||.+||.||+++|++..
T Consensus 343 ~m~~aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa~~A~~~~ 391 (398)
T 2a9f_A 343 EMQIAAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVRSVVLKSE 391 (398)
T ss_dssp HHHHHHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTCCCCC---
T ss_pred HHHHHHHHHHHhcCCcccCCCCccCCCCCc-chhHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999 9999999999999998653
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=3.6e-106 Score=856.32 Aligned_cols=354 Identities=28% Similarity=0.436 Sum_probs=329.8
Q ss_pred HHHHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCccccccCCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCC
Q 006454 173 KLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLG 252 (644)
Q Consensus 173 ~LFY~ll~~~~ee~lPivYTPtVG~acq~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG 252 (644)
..++++.++|.|+ |||+||||||++|++|+ ++|.++| +|+.++++|+|||||||||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~~v~--------------~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPEKTY--------------VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGGGHH--------------HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHHHHH--------------hhcccCCeEEEEECCccccCCCccc
Confidence 3566777888775 89999999999999987 5554444 6899999999999999999999999
Q ss_pred Cc-ccccchhhhhhHhhhcCCCCCceeeeeecCCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCC-cc
Q 006454 253 CH-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-IL 330 (644)
Q Consensus 253 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~Av~~~fGp~-~l 330 (644)
++ ||+||+||+.||++||||| |+|||||+|| +||||++|++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 98 9999999999999999999 9999999996 699999999999 77 88
Q ss_pred ceecccCCCCcHHHHHHHHcC--CCceeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 006454 331 IQVFEDFANHNAFDLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEIS 408 (644)
Q Consensus 331 Iq~fEDf~~~nAf~lL~ryr~--~~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~ 408 (644)
|| ||||+++|||++|+|||+ ++|||||||||||+|++||+++|+|++|++++|+||||+|||+||+++|++++..
T Consensus 138 i~-lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~-- 214 (388)
T 1vl6_A 138 IN-LEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL-- 214 (388)
T ss_dssp EE-ECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH--
T ss_pred eC-HhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC--
Confidence 99 999999999999999997 5999999999999999999999999999999999999999999999999999864
Q ss_pred HhcCCChhhhcCeEEEEccCCcccCCCccC-CchhhhhhccccCC---CCCHHHHHhccCCcEEEEccCCCCCCCHHHHH
Q 006454 409 KQTNMPLEETRKKIWLVDSKGLIVSSRLES-LQHFKKPWAHEHEP---VKELVDAVNAIKPTILIGTSGQGRTFTKEVVE 484 (644)
Q Consensus 409 ~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~-L~~~k~~fA~~~~~---~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~ 484 (644)
| .++||++|++|||+.+|.+. |+++|++||++... ..+|+|+|+. +|||||+|+ +|+||+|+|+
T Consensus 215 ---G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk 282 (388)
T 1vl6_A 215 ---G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIK 282 (388)
T ss_dssp ---T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHT
T ss_pred ---C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHH
Confidence 6 38999999999999999643 99999999987543 4689999998 899999999 7999999999
Q ss_pred HHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCcccCCeeecccCCCccccchhhhHHHHHhCCccc
Q 006454 485 AMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRV 564 (644)
Q Consensus 485 ~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~GraifASGSPF~pV~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~I 564 (644)
.|+ ++||||+||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|+++++|+ |
T Consensus 283 ~Ma---~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i 344 (388)
T 1vl6_A 283 KMS---RKPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-I 344 (388)
T ss_dssp TSC---SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-C
T ss_pred hcC---CCCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-c
Confidence 996 799999999999 99999999999 99999999 489999999999999999999999999 9
Q ss_pred CHHHHHHHHHHHHcccCccCCCCCcccCCCCCchhhHHHHHHHHHHHH
Q 006454 565 HDDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKA 612 (644)
Q Consensus 565 td~M~laAA~aLA~~v~~e~~~~g~l~P~~~~ir~vs~~IA~aVa~~A 612 (644)
||+|+++||++||+++ ++.++.|||++++ |+||.+||.||+++|
T Consensus 345 ~~~m~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 345 TKNMLLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp CHHHHHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHhhh---ccCCCcccCCCCc-chhhHHHHHHHHhhC
Confidence 9999999999999999 6778999999999 999999999999875
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=1.2e-85 Score=709.62 Aligned_cols=382 Identities=30% Similarity=0.437 Sum_probs=345.8
Q ss_pred HHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCccccccCCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCc-
Q 006454 176 YKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH- 254 (644)
Q Consensus 176 Y~ll~~~~ee~lPivYTPtVG~acq~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~- 254 (644)
+++.+++.| +|||+||||||++|++|++ |++++++ |+.++++|+|||||+|||||||+|.+
T Consensus 24 ~~~~~~~~~-~l~~~YtP~v~~~c~~~~~-------------~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG~hS 85 (439)
T 2dvm_A 24 PKVSLESRE-ELTLAYTPGVAEPCKEIAR-------------DPGKVYE----YTSKGNLVAVVSDGSRILGLGNIGPLA 85 (439)
T ss_dssp ESSCCCSHH-HHHHHSTTTTHHHHHHHHH-------------CGGGHHH----HSSGGGEEEEEECSTTBTTTBCCCHHH
T ss_pred EeeccCCHH-HCeeEECchhHHHHHHHHH-------------CHHHHHh----hcccCcEEEEEECCCeEecccceeccc
Confidence 344555555 6899999999999999983 6777775 88889999999999999999999997
Q ss_pred ccccchhhhhhHhhhcCCCCCceeeeeecCCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCC-cccee
Q 006454 255 GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-ILIQV 333 (644)
Q Consensus 255 GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~Av~~~fGp~-~lIq~ 333 (644)
++|+++||++||++||||| ++|++||+. | .|||+++|+..+ |+ ..||
T Consensus 86 ~sPvmh~ka~lf~~~gGid---~~yi~ldv~--------d-------------------~de~~~~v~~l~-~~f~Gin- 133 (439)
T 2dvm_A 86 GLPVMEGKALLFKRFGGVD---AFPIMIKEQ--------E-------------------PNKFIDIVKAIA-PTFGGIN- 133 (439)
T ss_dssp HHHHHHHHHHHHHHHHCCE---EEEEECSCC--------S-------------------HHHHHHHHHHTG-GGCSEEE-
T ss_pred cCHHHHHHHHHHHHhCCCC---CeeeeeecC--------C-------------------HHHHHHHHHHhC-ccCcEEE-
Confidence 8999999999999999999 999999992 1 488888888766 55 5699
Q ss_pred cccCCCCcHHHHHHHHcC--CCceeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhc
Q 006454 334 FEDFANHNAFDLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQT 411 (644)
Q Consensus 334 fEDf~~~nAf~lL~ryr~--~~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~ 411 (644)
||||+.||||++|++|++ ++||||||+||||++.++|+++|++..|++++++|+||+|||+||.+|+.+|.. .
T Consensus 134 vED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~-----~ 208 (439)
T 2dvm_A 134 LEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTE-----A 208 (439)
T ss_dssp ECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHH-----T
T ss_pred EEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHH-----c
Confidence 999999999999999986 699999999999999999999999999999999999999999999999999986 3
Q ss_pred CCChhhhcCeEEEEc----cCCcccCCCccC---CchhhhhhccccC---CCCCHHHHHhccCCcEEEEccCCC-CCCCH
Q 006454 412 NMPLEETRKKIWLVD----SKGLIVSSRLES---LQHFKKPWAHEHE---PVKELVDAVNAIKPTILIGTSGQG-RTFTK 480 (644)
Q Consensus 412 Gls~eeAr~~i~lvD----s~GLi~~~R~~~---L~~~k~~fA~~~~---~~~~L~eaV~~vkPtvLIG~S~~~-g~Fte 480 (644)
|+++ ++||++| ++||++++ +. |.+++++|++... ...+|.|+++. +|+|||+|+.+ |.|++
T Consensus 209 G~~~----~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~~~ 280 (439)
T 2dvm_A 209 GVKP----ENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVIKP 280 (439)
T ss_dssp TCCG----GGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSSCH
T ss_pred CCCc----CeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCCCh
Confidence 8753 7899999 99999887 24 7788888987533 24689999986 89999999985 89999
Q ss_pred HHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCcccCCeeecccCCCccccchhhhHHHHHhC
Q 006454 481 EVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSG 560 (644)
Q Consensus 481 evv~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~GraifASGSPF~pV~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~ 560 (644)
++++.|+ ++||||+||||+ +||++++|++| |.+++|||+ ++.|+|+||+|+|||||+|+++++
T Consensus 281 e~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG~----------~ml~~Q~nn~~~FPGi~~g~l~~~ 343 (439)
T 2dvm_A 281 QWIEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATGR----------SDYPNQINNLLGFPGIFRGALDVR 343 (439)
T ss_dssp HHHTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBSC----------SSSSSBCCGGGTHHHHHHHHHHTT
T ss_pred HHHHhcC---CCCEEEECCCCC--CcchHHHHHHc--CCeEEcCCC----------chhHHHHHHHhcccCchHHHHhcC
Confidence 9998885 899999999999 89999999998 899999994 899999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHHcccCccCCCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCC
Q 006454 561 AIRVHDDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAY 640 (644)
Q Consensus 561 a~~Itd~M~laAA~aLA~~v~~e~~~~g~l~P~~~~ir~vs~~IA~aVa~~A~~~GlA~~~~~p~dl~~~i~~~m~~P~Y 640 (644)
|++|||+|+++||++||++++++ .++.|||++++ |+||.+||.||+++|+++|+|+..++|+|+.+|+++.||.+.|
T Consensus 344 a~~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~~~~~~~~~~~~~~~~~~~~~ 420 (439)
T 2dvm_A 344 ARTITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVARTKVKGEWVEEHTIRLIEFYEN 420 (439)
T ss_dssp CSCCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhCccc--cCCccCCCccc-chhhHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHhhhhHH
Confidence 99999999999999999999876 68999999999 9999999999999999999998777788999999999998754
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.77 E-value=6.6e-08 Score=104.84 Aligned_cols=168 Identities=12% Similarity=0.217 Sum_probs=123.4
Q ss_pred CchhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcHH-------HHH--------------HHHc-------CCCcee
Q 006454 305 AIGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNAF-------DLL--------------EKYG-------TTHLVF 356 (644)
Q Consensus 305 ~~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nAf-------~lL--------------~ryr-------~~~~~F 356 (644)
-+-|||...++..+.+ ..++|+.+|. |=+ .=.. +++ .||+ -.+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~--~~~~p~~ilD---dGg-dl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi 185 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV--EGWQPNMILD---DGG-DLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAM 185 (435)
T ss_dssp CCHHHHHHHHHHHHCB--TTBCCSEEEE---SSS-HHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEE
T ss_pred CCHHHHHHHHHHHHhc--cCCCCcEEEe---cch-HHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEE
Confidence 4667888888776642 3456766653 422 1111 111 3443 269999
Q ss_pred ----------ecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 006454 357 ----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 426 (644)
Q Consensus 357 ----------NDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvD 426 (644)
.|++.||+-++++|+..+ ++..|.+.+++|+|+|..|.++|+.+.. .|. +++.+|
T Consensus 186 ~vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra-----~Ga-------~Viv~D 250 (435)
T 3gvp_A 186 NVNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKA-----MGS-------IVYVTE 250 (435)
T ss_dssp ECTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEC
T ss_pred EecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHH-----CCC-------EEEEEe
Confidence 899999999999999754 7999999999999999999999998864 264 588888
Q ss_pred cCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCC
Q 006454 427 SKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQS 505 (644)
Q Consensus 427 s~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~a 505 (644)
.+.. +...|. ..-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .
T Consensus 251 ~dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~ 311 (435)
T 3gvp_A 251 IDPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--T 311 (435)
T ss_dssp SCHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--T
T ss_pred CChh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--c
Confidence 7421 111121 11123579999985 99999999888999999999995 778999999997 8
Q ss_pred CCCHHHH
Q 006454 506 ECTAEEA 512 (644)
Q Consensus 506 Ect~edA 512 (644)
|+..+..
T Consensus 312 EId~~~L 318 (435)
T 3gvp_A 312 EIDVASL 318 (435)
T ss_dssp TBTGGGG
T ss_pred cCCHHHH
Confidence 8887665
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.77 E-value=2.8e-08 Score=107.81 Aligned_cols=130 Identities=18% Similarity=0.208 Sum_probs=105.5
Q ss_pred CCCcee----------ecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 006454 351 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 420 (644)
Q Consensus 351 ~~~~~F----------NDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~ 420 (644)
..+|+| .|++.||+-+++.|++ +.++..|.+.+++|+|.|..|.++|+.+... |.
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~---ratg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIK---RATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHH---HhcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 579999 8999999999999996 4579999999999999999999999998653 63
Q ss_pred eEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 006454 421 KIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 421 ~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 499 (644)
+++++|++. .+...|. ......+|.|+++. .|++|.+++..+.++++.++.|. +..||+-+|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 588888742 1111121 11223589999986 99999988888999999999995 789999999
Q ss_pred CCCCCCCCCHHHHhc
Q 006454 500 NPTSQSECTAEEAYT 514 (644)
Q Consensus 500 NPts~aEct~edA~~ 514 (644)
++. .|+.++.+.+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 997 8999987765
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.22 E-value=4.1e-06 Score=89.33 Aligned_cols=219 Identities=18% Similarity=0.239 Sum_probs=128.2
Q ss_pred CcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCc--ccccchhhhhhHhhhcCCCCCceeeeeecCCCCccccccCc
Q 006454 218 DKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH--GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDE 295 (644)
Q Consensus 218 d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp 295 (644)
.+..+.++.++ ..+|+|.++++..+|++|.+.. |+.|..+ ..+|. | +++|.+.+-.
T Consensus 26 tP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~p~------- 83 (401)
T 1x13_A 26 TPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNAPL------- 83 (401)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSCCC-------
T ss_pred CHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCCCC-------
Confidence 45566666654 4589999999999999998875 8888888 66765 2 5677654311
Q ss_pred ccccccccCCchhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcHHHHHHHHc-CCCceee-cCC------c----ch
Q 006454 296 FYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNAFDLLEKYG-TTHLVFN-DDI------Q----GT 363 (644)
Q Consensus 296 lYlG~r~~R~~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nAf~lL~ryr-~~~~~FN-DDi------Q----GT 363 (644)
.+.++.+++. ..+|- |=..+. | -.++++.+ ..+.+|+ +.+ | .+
T Consensus 84 -------------------~~~i~~l~~~---~~li~-~~~~~~-d-~~~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~ 138 (401)
T 1x13_A 84 -------------------DDEIALLNPG---TTLVS-FIWPAQ-N-PELMQKLAERNVTVMAMDSVPRISRAQSLDALS 138 (401)
T ss_dssp -------------------HHHHTTCCTT---CEEEE-CCCGGG-C-HHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHH
T ss_pred -------------------HHHHHHhcCC---CcEEE-EecCCC-C-HHHHHHHHHCCCEEEEeehhhhhhhhcccchHH
Confidence 2333333220 11222 222211 1 12333333 4566663 222 2 45
Q ss_pred HHHHHHHHHHHHHHh----CC----------CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 364 ASVVLAGLISAMKFL----GG----------SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 364 aaVvLAgll~Alr~~----g~----------~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
....+|| .+|++.. ++ .+...+|+|+|+|.+|.++++++.. .|. +++++|++.
T Consensus 139 ~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~v~D~~~ 205 (401)
T 1x13_A 139 SMANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANS-----LGA-------IVRAFDTRP 205 (401)
T ss_dssp HHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCG
T ss_pred HHHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcCCH
Confidence 5556665 3343332 22 2568999999999999999988754 262 588999864
Q ss_pred cccCCCccCCch------------hhhhhccccCC------CCCHHHHHhccCCcEEEEccCCC-----CCCCHHHHHHH
Q 006454 430 LIVSSRLESLQH------------FKKPWAHEHEP------VKELVDAVNAIKPTILIGTSGQG-----RTFTKEVVEAM 486 (644)
Q Consensus 430 Li~~~R~~~L~~------------~k~~fA~~~~~------~~~L~eaV~~vkPtvLIG~S~~~-----g~Fteevv~~M 486 (644)
-..... +.+.. .+-.|++...+ ..+|.+.++. .|++|++...+ .+++++.++.|
T Consensus 206 ~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~m 282 (401)
T 1x13_A 206 EVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSM 282 (401)
T ss_dssp GGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTS
T ss_pred HHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcC
Confidence 321100 00100 00011111000 0147788875 99999996443 57899999999
Q ss_pred HcCCCCcEEEecCCCC
Q 006454 487 ASLNEKPIIFSLSNPT 502 (644)
Q Consensus 487 a~~~erPIIFaLSNPt 502 (644)
. +..+|+-+|+|.
T Consensus 283 k---~g~vIVdva~~~ 295 (401)
T 1x13_A 283 K---AGSVIVDLAAQN 295 (401)
T ss_dssp C---TTCEEEETTGGG
T ss_pred C---CCcEEEEEcCCC
Confidence 5 678999999873
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.82 E-value=0.00011 Score=80.43 Aligned_cols=128 Identities=17% Similarity=0.189 Sum_probs=97.7
Q ss_pred CCCcee----------ecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 006454 351 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 420 (644)
Q Consensus 351 ~~~~~F----------NDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~ 420 (644)
-.+|+| .|+..||+-.++.|+. |.++..|...+++|+|.|..|.++|+.+... |+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-----Ga------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-----GA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHC-----CC-------
Confidence 479999 5778999999888885 6679999999999999999999999988642 63
Q ss_pred eEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 006454 421 KIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 421 ~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 499 (644)
+++.+|.+. .....|. ..-...+|.|+++. .|+++-+++..++++++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp------------~~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDP------------ICALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSH------------HHHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCc------------chhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 588887631 1111111 11123579999986 99999998888899999999995 778888888
Q ss_pred CCCCCCCCCHHHH
Q 006454 500 NPTSQSECTAEEA 512 (644)
Q Consensus 500 NPts~aEct~edA 512 (644)
+.. .|+..+..
T Consensus 335 Rgd--vEID~~aL 345 (464)
T 3n58_A 335 HFD--NEIQVAAL 345 (464)
T ss_dssp SST--TTBTCGGG
T ss_pred CCC--cccCHHHH
Confidence 876 56665444
No 12
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.68 E-value=9.3e-05 Score=81.47 Aligned_cols=132 Identities=17% Similarity=0.219 Sum_probs=99.9
Q ss_pred CCCcee----------ecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 006454 351 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 420 (644)
Q Consensus 351 ~~~~~F----------NDDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~ 420 (644)
-.+|+| .|+++||+-.++.|+. |.++..|.+.+++|.|+|..|.++|+.+.. .|.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa-----~GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQ-----AGA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHH-----CCC-------
Confidence 479999 6889999999999886 789999999999999999888888888764 363
Q ss_pred eEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 006454 421 KIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 500 (644)
Q Consensus 421 ~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 500 (644)
+++++|++.. + ..... ...-...++.++++. .|+++-.++..++++.+.++.|. +..||+-.++
T Consensus 290 ~Viv~D~~~~----~---a~~Aa----~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQAT----MEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHHHH----HTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSS
T ss_pred EEEEEcCCHH----H---HHHHH----HhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCC
Confidence 6888887421 1 11111 111122456666664 89999999888899999998884 7889999999
Q ss_pred CCCCCCCCHHHHhcc
Q 006454 501 PTSQSECTAEEAYTW 515 (644)
Q Consensus 501 Pts~aEct~edA~~w 515 (644)
+. .|...++.-.|
T Consensus 354 ~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 354 FD--NEIDMLGLETH 366 (488)
T ss_dssp TT--TTBTHHHHHTS
T ss_pred CC--cccchHHHHHh
Confidence 85 78888776555
No 13
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.99 E-value=0.00082 Score=72.41 Aligned_cols=110 Identities=16% Similarity=0.192 Sum_probs=71.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc--------------hhhhhh
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ--------------HFKKPW 446 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~--------------~~k~~f 446 (644)
.+...|++|+|+|.+|.++|+++... |. +++++|++.-..+...+ +- +-+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHH-TTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccch
Confidence 36789999999999999999988643 63 58999987532111000 00 001124
Q ss_pred ccccCC------CCCHHHHHhccCCcEEEEccCCC-----CCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCC
Q 006454 447 AHEHEP------VKELVDAVNAIKPTILIGTSGQG-----RTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECT 508 (644)
Q Consensus 447 A~~~~~------~~~L~eaV~~vkPtvLIG~S~~~-----g~Fteevv~~Ma~~~erPIIFaLSN-Pts~aEct 508 (644)
+++..+ ..+|.|+++. .|++|++...+ .+||+|+++.|. +..+|+-+|- |-...|+|
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 432111 2478999986 99999985433 479999999995 8899999995 33445554
No 14
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.98 E-value=0.0023 Score=67.40 Aligned_cols=226 Identities=15% Similarity=0.126 Sum_probs=120.3
Q ss_pred CcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCc--ccccchhhhhhHhhhcCCCCCceeeeeecCCCC-----ccc
Q 006454 218 DKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH--GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTN-----NEK 290 (644)
Q Consensus 218 d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTn-----Ne~ 290 (644)
.+..+.++.+. ..+|+|.++++.-.|+.|.... |..|..++-.++ ++. +|+|.+.+- +++
T Consensus 19 ~P~~v~~L~~~----G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~a------diil~v~~p~~~~~~~~ 85 (384)
T 1l7d_A 19 SPEVVKKLVGL----GFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQA------DVVWKVQRPMTAEEGTD 85 (384)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSC------SEEEEEECCCCGGGSCC
T ss_pred CHHHHHHHHhC----CCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCC------CEEEEecCcccccCCHH
Confidence 34555555543 5689999999999999997764 777777766665 333 355555432 111
Q ss_pred c---c-cCcccccccccCCchhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcHHHHHHHHcCCCceeecCCcchHHH
Q 006454 291 L---L-DDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASV 366 (644)
Q Consensus 291 L---L-~DplYlG~r~~R~~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nAf~lL~ryr~~~~~FNDDiQGTaaV 366 (644)
. + ..-.+++.-+.- ++ .+.++++.++ |- .++. +|-.....+- ..+++|+ ...
T Consensus 86 ~i~~l~~~~~~i~~~~~~-----~~---~~~~~~~~~~-gi-~~~~-~e~~~~~~~~-------~~l~~l~------~~a 141 (384)
T 1l7d_A 86 EVALIKEGAVLMCHLGAL-----TN---RPVVEALTKR-KI-TAYA-MELMPRISRA-------QSMDILS------SQS 141 (384)
T ss_dssp GGGGSCTTCEEEEECCGG-----GC---HHHHHHHHHT-TC-EEEE-GGGCCCSGGG-------GGGCHHH------HHH
T ss_pred HHHhhccCCEEEEEeccc-----CC---HHHHHHHHHC-CC-EEEE-eccccccccc-------cccchhh------HHH
Confidence 1 1 122233333221 11 1122232221 11 1223 3322211000 0112222 111
Q ss_pred HHH---HHHHHHHHhCC----------CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccC
Q 006454 367 VLA---GLISAMKFLGG----------SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVS 433 (644)
Q Consensus 367 vLA---gll~Alr~~g~----------~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~ 433 (644)
.+| +++.+.+..++ .+...|++|+|+|.+|.+++..+.. .|. +++++|++.-
T Consensus 142 ~~ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~~~d~~~~--- 206 (384)
T 1l7d_A 142 NLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LGA-------VVMATDVRAA--- 206 (384)
T ss_dssp HHHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCST---
T ss_pred HHHHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCHH---
Confidence 223 45556665553 5788999999999999999887754 362 3899998532
Q ss_pred CCccCCchhhh-----------------hhccccC------CCCCHHHHHhccCCcEEEEccCC-----CCCCCHHHHHH
Q 006454 434 SRLESLQHFKK-----------------PWAHEHE------PVKELVDAVNAIKPTILIGTSGQ-----GRTFTKEVVEA 485 (644)
Q Consensus 434 ~R~~~L~~~k~-----------------~fA~~~~------~~~~L~eaV~~vkPtvLIG~S~~-----~g~Fteevv~~ 485 (644)
|.+.+..+-. .|++... ....|.+.++. .|++|.++.. +.+++++.++.
T Consensus 207 -~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~ 283 (384)
T 1l7d_A 207 -TKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTK 283 (384)
T ss_dssp -THHHHHHTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTT
T ss_pred -HHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhc
Confidence 1110100000 1111100 00127777774 9999999833 34689999999
Q ss_pred HHcCCCCcEEEecCCC
Q 006454 486 MASLNEKPIIFSLSNP 501 (644)
Q Consensus 486 Ma~~~erPIIFaLSNP 501 (644)
|. +..+|+-+|-+
T Consensus 284 mk---~g~vivdva~~ 296 (384)
T 1l7d_A 284 MK---PGSVIIDLAVE 296 (384)
T ss_dssp SC---TTCEEEETTGG
T ss_pred CC---CCCEEEEEecC
Confidence 95 67789888864
No 15
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.45 E-value=0.0033 Score=67.26 Aligned_cols=100 Identities=22% Similarity=0.200 Sum_probs=66.9
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh-------------hhhhcc
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-------------KKPWAH 448 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~-------------k~~fA~ 448 (644)
+...|++|+|+|.+|..+|+.+... |. +++++|++.- |.+.+... ...|++
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~----~l~~~~~lGa~~~~l~~~~~~~~gya~ 245 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPE----VAEQVRSVGAQWLDLGIDAAGEGGYAR 245 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGG----GHHHHHHTTCEECCCC-----------
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHH----HHHHHHHcCCeEEeccccccccccchh
Confidence 5789999999999999999988653 63 5889998642 10101110 011221
Q ss_pred cc------CCCCCHHHHHhccCCcEEEEccCCC-----CCCCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 449 EH------EPVKELVDAVNAIKPTILIGTSGQG-----RTFTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 449 ~~------~~~~~L~eaV~~vkPtvLIG~S~~~-----g~Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
+. ....+|.|+++. .|++|++...+ .+||+++++.|. +..+|+-+|=+.
T Consensus 246 ~~~~~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 246 ELSEAERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp --CHHHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred hhhHHHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 10 012368888886 99999975333 479999999995 788999998644
No 16
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.40 E-value=0.05 Score=59.03 Aligned_cols=178 Identities=19% Similarity=0.183 Sum_probs=125.2
Q ss_pred CchhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcHH-H-HHHHHcC---C--Ccee----------ecCCcchHHHH
Q 006454 305 AIGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNAF-D-LLEKYGT---T--HLVF----------NDDIQGTASVV 367 (644)
Q Consensus 305 ~~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nAf-~-lL~ryr~---~--~~~F----------NDDiQGTaaVv 367 (644)
.+..|-..|...|+.++.+.-||+.-|- =+|++..-.. . +.+.|+. . -.++ .|--.-||--+
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dip-ApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv 204 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIP-APDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGV 204 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEC-CBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcc-CCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHH
Confidence 4556777889999999999889877776 6888763221 1 4456642 1 1222 23345688888
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhh-hhh
Q 006454 368 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK-KPW 446 (644)
Q Consensus 368 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k-~~f 446 (644)
..++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +-+.+.|++|-|++.. .|+... +.+
T Consensus 205 ~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~ 271 (424)
T 3k92_A 205 TICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD--GLDIPYLLDK 271 (424)
T ss_dssp HHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT--CCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHH
Confidence 889999999999999999999999999999999999763 53 4467999999999764 343321 122
Q ss_pred ccccC-------CCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 006454 447 AHEHE-------PVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 502 (644)
Q Consensus 447 A~~~~-------~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 502 (644)
..... ..-+-.+ +-.++.||||=+..+ +..|++-++.+ .-.+|.--+| |+
T Consensus 272 ~~~~g~i~~~~a~~~~~~~-i~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 272 RDSFGMVTNLFTDVITNEE-LLEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CCSSSCCGGGCSCCBCHHH-HHHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHHhCCCCCCCcEEecCcc-ceeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 21111 1112234 345789999988775 69999988776 5788888888 65
No 17
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.27 E-value=0.03 Score=56.49 Aligned_cols=122 Identities=15% Similarity=0.190 Sum_probs=80.3
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch
Q 006454 362 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 441 (644)
Q Consensus 362 GTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~ 441 (644)
.+-+|+=.++..++...+..|.+.+++|+|+|..|..+|+.+.. .|. +++.+|+.. .+ +..
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~dr~~----~~---~~~ 193 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAA-----LGA-------KVKVGARES----DL---LAR 193 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHH
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHH
Confidence 34455555555566677889999999999999999999998754 253 588888742 11 111
Q ss_pred hhhhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecC-CCCCCCCCCHHHH
Q 006454 442 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS-NPTSQSECTAEEA 512 (644)
Q Consensus 442 ~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS-NPts~aEct~edA 512 (644)
.+ .+--......+|.|+++. .|++|-... .+.++++.++.|. +..+|+=+| +|. ++..+.|
T Consensus 194 ~~-~~g~~~~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~l~~mk---~~~~lin~ar~~~---~~~~~~a 255 (293)
T 3d4o_A 194 IA-EMGMEPFHISKAAQELRD--VDVCINTIP-ALVVTANVLAEMP---SHTFVIDLASKPG---GTDFRYA 255 (293)
T ss_dssp HH-HTTSEEEEGGGHHHHTTT--CSEEEECCS-SCCBCHHHHHHSC---TTCEEEECSSTTC---SBCHHHH
T ss_pred HH-HCCCeecChhhHHHHhcC--CCEEEECCC-hHHhCHHHHHhcC---CCCEEEEecCCCC---CCCHHHH
Confidence 11 110000012468888875 999997664 5799999998884 567888888 443 3445444
No 18
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.23 E-value=0.22 Score=54.44 Aligned_cols=183 Identities=15% Similarity=0.103 Sum_probs=125.2
Q ss_pred CCchhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcH-----HHHHHHHcCC-Ccee----------ecCCcchHHHH
Q 006454 304 RAIGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNA-----FDLLEKYGTT-HLVF----------NDDIQGTASVV 367 (644)
Q Consensus 304 R~~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nA-----f~lL~ryr~~-~~~F----------NDDiQGTaaVv 367 (644)
..+..|-..|...||..+.+..||+.=|- -.|+...-. +...++++.. -+|| .+.-..||-=+
T Consensus 140 ~~s~~El~R~~~~f~~eL~~~iG~d~dvp-a~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv 218 (450)
T 4fcc_A 140 GKSEGEVMRFCQALMTELYRHLGADTDVP-AGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGL 218 (450)
T ss_dssp TCCHHHHHHHHHHHHHHHGGGCBTTTEEE-ECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhheecCCCCCC-ccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeH
Confidence 34667888899999999999999988887 788865322 2233333332 2333 23334488878
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc
Q 006454 368 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 447 (644)
Q Consensus 368 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA 447 (644)
.-++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=|-+-|++|-|++.. .++..+....
T Consensus 219 ~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l 285 (450)
T 4fcc_A 219 VYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARL 285 (450)
T ss_dssp HHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHH
Confidence 888899999999999999999999999999999998753 63 4566789999988753 3544332111
Q ss_pred cc--cCCCCCHHHH-------------HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 006454 448 HE--HEPVKELVDA-------------VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 502 (644)
Q Consensus 448 ~~--~~~~~~L~ea-------------V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 502 (644)
.+ ....+.+.+. +-.++.|||+=+..+ +..|++-++.+.+. .-.+|.-=+| |+
T Consensus 286 ~e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a~-g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 286 IEIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQLIAN-GVKAVAEGANMPT 354 (450)
T ss_dssp HHHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHHT-TCCEEECCSSSCB
T ss_pred HHHhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHHHHhc-CceEEecCCCCCC
Confidence 11 0011122221 234689999988775 59999999998642 2357777777 55
No 19
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.03 E-value=0.041 Score=59.61 Aligned_cols=178 Identities=13% Similarity=0.124 Sum_probs=122.3
Q ss_pred CchhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcH--HHHHHHHcC---C--Ccee----------ecCCcchHHHH
Q 006454 305 AIGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNA--FDLLEKYGT---T--HLVF----------NDDIQGTASVV 367 (644)
Q Consensus 305 ~~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nA--f~lL~ryr~---~--~~~F----------NDDiQGTaaVv 367 (644)
.+..|-..|...|++++.+.-||..-|= =+|++..-. --+.+.|+. . -.++ .+.-.-||-=+
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvp-A~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 201 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDIL-GPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGA 201 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEE-EEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEE-CCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHH
Confidence 3456777889999999999888887777 799987422 124556631 1 1222 23334577777
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEccCCcccCCCccCCchhh-hh
Q 006454 368 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLESLQHFK-KP 445 (644)
Q Consensus 368 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~-lvDs~GLi~~~R~~~L~~~k-~~ 445 (644)
.-++-.+++..|.+|++.||+|-|.|..|...|++|.+ .| -+++ +.|++|-|+.... |+..+ +.
T Consensus 202 ~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~-----~G-------akVVavsD~~G~i~dp~G--ld~~~l~~ 267 (419)
T 3aoe_E 202 LLVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAER-----LG-------MRVVAVATSMGGMYAPEG--LDVAEVLS 267 (419)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEEETTEEEECTTC--CCHHHHHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEEEcCCCeEECCCC--CCHHHHHH
Confidence 77888889999999999999999999999999998865 35 3455 9999999997642 33221 11
Q ss_pred hccccCCCC----CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCC
Q 006454 446 WAHEHEPVK----ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTS 503 (644)
Q Consensus 446 fA~~~~~~~----~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pts 503 (644)
++....... +-.| +-.++.|||+=++. ++.+|++-.+.+ .-.||.--+| |++
T Consensus 268 ~~~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t 324 (419)
T 3aoe_E 268 AYEATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN 324 (419)
T ss_dssp HHHHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC
T ss_pred HHHhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC
Confidence 111111000 0012 34578999998876 569999888877 5679998888 653
No 20
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.92 E-value=0.02 Score=58.45 Aligned_cols=88 Identities=17% Similarity=0.219 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc
Q 006454 368 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 447 (644)
Q Consensus 368 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA 447 (644)
-.|++.+++..+.++++.+++|+|||.+|.+++..+.. .|. ++|+++|+. .++ .+...+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 46788999988889999999999999777777766654 364 679999874 222 222222222
Q ss_pred cc-------cCCCCCHHHHHhccCCcEEEEccCCC
Q 006454 448 HE-------HEPVKELVDAVNAIKPTILIGTSGQG 475 (644)
Q Consensus 448 ~~-------~~~~~~L~eaV~~vkPtvLIG~S~~~ 475 (644)
.. ..+..+|.++++. +|++|-++..|
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888886 89999887765
No 21
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.90 E-value=0.018 Score=59.99 Aligned_cols=96 Identities=20% Similarity=0.256 Sum_probs=77.6
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc
Q 006454 362 GTASVVLAGLISAMKFLGGSLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 440 (644)
Q Consensus 362 GTaaVvLAgll~Alr~~g~~L~d~riv~~GAG-sAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~ 440 (644)
+-.-+|-.|++-.++..+.+++..++|++|+| ..|.-+|.++... | .++++++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 44567888999999999999999999999999 5799999888652 4 358888753
Q ss_pred hhhhhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 006454 441 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNP 501 (644)
Q Consensus 441 ~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNP 501 (644)
..+|.+.++. +|++|+..+.++.+|+++|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 1468899986 99999999999999999875 45566666644
No 22
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.71 E-value=0.027 Score=58.27 Aligned_cols=83 Identities=17% Similarity=0.258 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh
Q 006454 364 ASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF 442 (644)
Q Consensus 364 aaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~ 442 (644)
.-++-.|++-.++..+.+|+..++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~-------------- 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF-------------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 4578888999999999999999999999987 899999988652 53 47777653
Q ss_pred hhhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHH
Q 006454 443 KKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVE 484 (644)
Q Consensus 443 k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~ 484 (644)
..+|.+.++. +|++|...+.++.++.|+|+
T Consensus 195 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (285)
T 3l07_A 195 ----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK 224 (285)
T ss_dssp ----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC
T ss_pred ----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC
Confidence 1368899986 99999999999999998873
No 23
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.62 E-value=0.056 Score=54.35 Aligned_cols=121 Identities=16% Similarity=0.250 Sum_probs=75.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhcc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 463 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 463 (644)
..||.|+|+|..|.++|..+... |.. ..+++++|++ . +.++..++.|- .....++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~---~~~~~l~~~~g--i~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----L---DKLDFFKEKCG--VHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----S---HHHHHHHHTTC--CEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----H---HHHHHHHHHcC--CEEeCChHHHHhc-
Confidence 46899999999999999988753 643 2478998874 1 12323322221 1112578899885
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC--CCCcEEEecCCCCCCCCCCHHHHhcccCC--cEEEeeCCCCCCccc
Q 006454 464 KPTILIGTSGQGRTFTKEVVEAMASL--NEKPIIFSLSNPTSQSECTAEEAYTWSQG--RAIFASGSPFDPFEY 533 (644)
Q Consensus 464 kPtvLIG~S~~~g~Fteevv~~Ma~~--~erPIIFaLSNPts~aEct~edA~~wT~G--raifASGSPF~pV~~ 533 (644)
+|++| ++..+ ...+++++.+..+ .++.+|...++..+ .++.-+|... +++-+ -|+.|...
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~-----~~~l~~~l~~~~~vvr~--mPn~p~~v 127 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT-----TPLIEKWLGKASRIVRA--MPNTPSSV 127 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC-----HHHHHHHHTCCSSEEEE--ECCGGGGG
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC-----HHHHHHHcCCCCeEEEE--ecCChHHh
Confidence 78877 34444 4568899888764 56668888888774 3444445432 33322 36555544
No 24
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.30 E-value=0.045 Score=56.58 Aligned_cols=92 Identities=16% Similarity=0.246 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch
Q 006454 363 TASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 441 (644)
Q Consensus 363 TaaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~ 441 (644)
-.-++-.|++-.++..+.+|+..++|++|+|. .|..+|.+|... |. .+++++++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 45678889999999999999999999999976 899999998752 52 47888753
Q ss_pred hhhhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEec
Q 006454 442 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSL 498 (644)
Q Consensus 442 ~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaL 498 (644)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=+
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDV 231 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDV 231 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEEC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEe
Confidence 1368888986 99999999999999998874 34455544
No 25
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.27 E-value=0.55 Score=51.45 Aligned_cols=190 Identities=17% Similarity=0.171 Sum_probs=127.3
Q ss_pred CchhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcHH--HHHHHHc---CCCc-ee----------ecCCcchHHHHH
Q 006454 305 AIGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNAF--DLLEKYG---TTHL-VF----------NDDIQGTASVVL 368 (644)
Q Consensus 305 ~~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nAf--~lL~ryr---~~~~-~F----------NDDiQGTaaVvL 368 (644)
.+..|...|...||..+.+-+||..=|= =+|++..-.. -+.+.|+ ...+ |+ ..--.-||-=+.
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~Dvp-ApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~ 223 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVP-AGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVV 223 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEE-ECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcC-CCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHH
Confidence 3566778888889999988889987777 7888764321 2445554 2221 11 112235777777
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhh---
Q 006454 369 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP--- 445 (644)
Q Consensus 369 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~--- 445 (644)
-++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|++.. .|+..+..
T Consensus 224 ~~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~ 290 (456)
T 3r3j_A 224 YFAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIM 290 (456)
T ss_dssp HHHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHH
Confidence 78888899999999999999999999999999998764 53 3345899999988754 34332211
Q ss_pred ------------hccccCCCC--CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCCHH
Q 006454 446 ------------WAHEHEPVK--ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAE 510 (644)
Q Consensus 446 ------------fA~~~~~~~--~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pts~aEct~e 510 (644)
|+...+... +- +.+-.++.||||=+.. ++..|++-++.+.+ +.-+||.--+| |++ +| ++
T Consensus 291 ~~k~~~~~~v~~~~~~~~~a~~v~~-~~i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~T-~e--A~ 364 (456)
T 3r3j_A 291 DIKNNQRLRLKEYLKYSKTAKYFEN-QKPWNIPCDIAFPCAT-QNEINENDADLFIQ-NKCKMIVEGANMPTH-IK--AL 364 (456)
T ss_dssp HHHHTSCCCGGGGGGTCSSCEEECS-CCGGGSCCSEEEECSC-TTCBCHHHHHHHHH-HTCCEEECCSSSCBC-TT--HH
T ss_pred HHHHhcCcchhhhhhcCCCceEeCC-ccccccCccEEEeCCC-ccchhhHHHHHHHh-cCCeEEEecCCCCCC-HH--HH
Confidence 111000000 00 1133568999998887 57999999999843 25689999998 653 44 55
Q ss_pred HHhc
Q 006454 511 EAYT 514 (644)
Q Consensus 511 dA~~ 514 (644)
+.+.
T Consensus 365 ~iL~ 368 (456)
T 3r3j_A 365 HKLK 368 (456)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 26
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.25 E-value=0.042 Score=56.56 Aligned_cols=82 Identities=15% Similarity=0.272 Sum_probs=67.6
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc
Q 006454 362 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 440 (644)
Q Consensus 362 GTaaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~ 440 (644)
+-.-+|-.|++..++..+ |+..++|++|+|. .|..+|.++... |. .+++++++
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~------------ 183 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK------------ 183 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 344678889999999999 9999999999985 899999998752 42 57888752
Q ss_pred hhhhhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHH
Q 006454 441 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVV 483 (644)
Q Consensus 441 ~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv 483 (644)
..+|.+.++. +|++|...+.++.++++++
T Consensus 184 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~v 212 (276)
T 3ngx_A 184 ------------TKDIGSMTRS--SKIVVVAVGRPGFLNREMV 212 (276)
T ss_dssp ------------CSCHHHHHHH--SSEEEECSSCTTCBCGGGC
T ss_pred ------------cccHHHhhcc--CCEEEECCCCCccccHhhc
Confidence 1468899997 9999999999988888876
No 27
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.19 E-value=0.27 Score=53.61 Aligned_cols=179 Identities=15% Similarity=0.129 Sum_probs=120.9
Q ss_pred CchhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcHH---HHHHHHcC---C--Ccee----------ecCCcchHHH
Q 006454 305 AIGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNAF---DLLEKYGT---T--HLVF----------NDDIQGTASV 366 (644)
Q Consensus 305 ~~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nAf---~lL~ryr~---~--~~~F----------NDDiQGTaaV 366 (644)
.+..|-..|...|+.++.+.-||..-|= =+|++.. .. -+.+.|+. . -.++ .+.-.-||-=
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvp-A~DvGt~-~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~G 217 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIP-APDVNTG-EREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRG 217 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEC-CBCTTCC-HHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEE-CCCCCCC-HHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHH
Confidence 3456777889999999999888877777 7899874 22 24556631 1 1222 2333457777
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccC---Cchhh
Q 006454 367 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES---LQHFK 443 (644)
Q Consensus 367 vLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~---L~~~k 443 (644)
+.-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++|-|++...=+ |..++
T Consensus 218 v~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----Ga------kvVavsD~~G~i~dp~Gld~~~l~~~~ 286 (440)
T 3aog_A 218 VFITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----GA------RVVAVQDHTGTVYNEAGIDPYDLLRHV 286 (440)
T ss_dssp HHHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----CC------EEEEEEcCCcEEECCCCCCHHHHHHHH
Confidence 7778888899999999999999999999999999988753 53 2344999999999865311 22222
Q ss_pred hhhcc--c--cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 006454 444 KPWAH--E--HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 502 (644)
Q Consensus 444 ~~fA~--~--~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 502 (644)
..+-. + ....-+-.| +-.++.||||=++. ++..|++-++.+ .-.+|.--+| |+
T Consensus 287 ~~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~ 344 (440)
T 3aog_A 287 QEFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPT 344 (440)
T ss_dssp HHTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HhcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCcccc
Confidence 22110 0 000012334 44678999998766 558888887776 5678887887 65
No 28
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.15 E-value=0.04 Score=57.03 Aligned_cols=95 Identities=14% Similarity=0.176 Sum_probs=75.3
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc
Q 006454 362 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 440 (644)
Q Consensus 362 GTaaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~ 440 (644)
+-.-+|-.|++-.++..+.+++..++|++|+|. .|.-+|.++... | ..+++++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC------------
Confidence 445678889999999999999999999999995 699998888642 4 358888742
Q ss_pred hhhhhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 006454 441 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 500 (644)
Q Consensus 441 ~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 500 (644)
..+|.+.++. +|++|+..+.++.+|+++|+ +.-+|+=++-
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi 232 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGI 232 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCC
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccC
Confidence 0468899987 99999999999999988873 3445555553
No 29
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.04 E-value=0.043 Score=57.04 Aligned_cols=91 Identities=22% Similarity=0.308 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc
Q 006454 368 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 447 (644)
Q Consensus 368 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA 447 (644)
-.|++.+|+..|.++++.++|++|||.+|.+||..|.. .|. ++|+++++.+ .+.+........+.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~~----~~~~~a~~la~~~~ 202 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRKD----DFYANAEKTVEKIN 202 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECSS----TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECCC----chHHHHHHHHHHhh
Confidence 46788888888999999999999999777777776654 364 6899998852 11111222222221
Q ss_pred cc---------cCCCCCHHHHHhccCCcEEEEccCCC
Q 006454 448 HE---------HEPVKELVDAVNAIKPTILIGTSGQG 475 (644)
Q Consensus 448 ~~---------~~~~~~L~eaV~~vkPtvLIG~S~~~ 475 (644)
.. -++..+|.++++. +|++|-++..|
T Consensus 203 ~~~~~~~~~~~~~~~~~l~~~l~~--aDiIINaTp~G 237 (315)
T 3tnl_A 203 SKTDCKAQLFDIEDHEQLRKEIAE--SVIFTNATGVG 237 (315)
T ss_dssp HHSSCEEEEEETTCHHHHHHHHHT--CSEEEECSSTT
T ss_pred hhcCCceEEeccchHHHHHhhhcC--CCEEEECccCC
Confidence 10 0111235566664 89999777655
No 30
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.02 E-value=0.059 Score=55.78 Aligned_cols=83 Identities=16% Similarity=0.269 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh
Q 006454 364 ASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF 442 (644)
Q Consensus 364 aaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~ 442 (644)
.-++-.|++-.|+..+.+|+..++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~-------------- 194 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF-------------- 194 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 4577888999999999999999999999875 899999998752 42 47777652
Q ss_pred hhhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHH
Q 006454 443 KKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVE 484 (644)
Q Consensus 443 k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~ 484 (644)
..+|.+.++. +|++|+..+.++.++.|+|+
T Consensus 195 ----------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (286)
T 4a5o_A 195 ----------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK 224 (286)
T ss_dssp ----------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC
T ss_pred ----------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC
Confidence 1368899986 99999999999999998874
No 31
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.01 E-value=0.18 Score=54.58 Aligned_cols=179 Identities=15% Similarity=0.165 Sum_probs=109.9
Q ss_pred CchhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcHH--HHHHHHc---CCC---cee----------ecCCcchHHH
Q 006454 305 AIGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNAF--DLLEKYG---TTH---LVF----------NDDIQGTASV 366 (644)
Q Consensus 305 ~~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nAf--~lL~ryr---~~~---~~F----------NDDiQGTaaV 366 (644)
.+..|-..|...|+.++.+.-||..-|- =+|++..-.. -+.+.|+ ... .++ .+.-.-||-=
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvp-A~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~G 194 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIP-APDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFG 194 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEE-EECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEE-CCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHH
Confidence 3456777889999999999888888787 7999875221 3455664 111 222 2223357666
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC-----CcccCCCccCCch
Q 006454 367 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK-----GLIVSSRLESLQH 441 (644)
Q Consensus 367 vLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~-----GLi~~~R~~~L~~ 441 (644)
+.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +=+-+.|++ |-|++... |+.
T Consensus 195 v~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~-----~Ga------kvVavsD~~~~~~~G~i~d~~G--ld~ 261 (421)
T 2yfq_A 195 VAVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER-----QGG------KVCAIAEWDRNEGNYALYNENG--IDF 261 (421)
T ss_dssp HHHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH-----TTC------CEEECCBCCSSSCSBCCBCSSC--CCH
T ss_pred HHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEEecCCCccceEEECCCC--CCH
Confidence 777788889999999999999999999999999998875 363 334489999 99998643 432
Q ss_pred hhh-hhccccCCCCCH-------HHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 006454 442 FKK-PWAHEHEPVKEL-------VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 502 (644)
Q Consensus 442 ~k~-~fA~~~~~~~~L-------~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 502 (644)
... .+.........+ .+.+-.++.||||=++. ++..|++-.+.+ .-.+|.-=+| |+
T Consensus 262 ~~l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 262 KELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHHCC---------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 211 111111111000 01223456777776654 456777766655 4556666666 44
No 32
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=94.99 E-value=0.024 Score=57.76 Aligned_cols=86 Identities=21% Similarity=0.268 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc
Q 006454 368 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 447 (644)
Q Consensus 368 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA 447 (644)
-.|++.+++..+.++++.+++|+|||.+|.++|..|.. .|. ++|+++++. .++.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 34677888888999999999999999888888777754 364 578988885 222222221 111
Q ss_pred cccCCCCCHHHHHhccCCcEEEEccCCC
Q 006454 448 HEHEPVKELVDAVNAIKPTILIGTSGQG 475 (644)
Q Consensus 448 ~~~~~~~~L~eaV~~vkPtvLIG~S~~~ 475 (644)
. ....++.++++. +|++|-++..|
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G 186 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG 186 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC
Confidence 0 112345565654 89999776654
No 33
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.99 E-value=0.037 Score=57.98 Aligned_cols=114 Identities=18% Similarity=0.282 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHH---------hCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCC
Q 006454 365 SVVLAGLISAMKF---------LGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS 434 (644)
Q Consensus 365 aVvLAgll~Alr~---------~g~~L~d~riv~~GAGs-AG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~ 434 (644)
.++-.|.+-.++. .|.++...++|++|+|. .|.-+|.++... | .+++++|+...-...
T Consensus 149 PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~ 216 (320)
T 1edz_A 149 PCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFT 216 (320)
T ss_dssp CHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEE
T ss_pred CCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHh
Confidence 3444555666666 68899999999999996 598888888642 4 359999997655555
Q ss_pred CccCCchhhhhhccccCC---C--CCHHHHHhccCCcEEEEccCCCCC-CCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 435 RLESLQHFKKPWAHEHEP---V--KELVDAVNAIKPTILIGTSGQGRT-FTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 435 R~~~L~~~k~~fA~~~~~---~--~~L~eaV~~vkPtvLIG~S~~~g~-Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
|.+.+.. .+|.... . .+|.++++. +|++|+..+.++. +|.++|+ +.-+|+-++.|-
T Consensus 217 ra~~la~----~~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 217 RGESLKL----NKHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp SCCCSSC----CCCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred HHHHHhh----hcccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 5433331 1121100 1 469999997 9999999999887 8988873 234555555543
No 34
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=94.93 E-value=0.045 Score=56.81 Aligned_cols=90 Identities=27% Similarity=0.365 Sum_probs=57.9
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc
Q 006454 369 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 448 (644)
Q Consensus 369 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 448 (644)
.|++.+|+..|.++++.++|++|||.+|.+|+..|.. .|. ++|+++++. ..|.+........+..
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~~ 197 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVNE 197 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhhh
Confidence 5778888888999999999999999888777777754 364 689999884 2221112222222221
Q ss_pred c------cCCCCCH---HHHHhccCCcEEEEccCCC
Q 006454 449 E------HEPVKEL---VDAVNAIKPTILIGTSGQG 475 (644)
Q Consensus 449 ~------~~~~~~L---~eaV~~vkPtvLIG~S~~~ 475 (644)
. ..+..++ .+.++. .|++|-++..|
T Consensus 198 ~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 198 NTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred ccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 1 0112344 566665 89999877765
No 35
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.92 E-value=0.059 Score=53.91 Aligned_cols=98 Identities=20% Similarity=0.309 Sum_probs=57.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhh-------hccc--------
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP-------WAHE-------- 449 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~-------fA~~-------- 449 (644)
+||.|+|+|..|.+||..++.. |. +++++|++- + .++..+.. +...
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~~~~~~~~g~~~~~~~ 65 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDINT----D---ALDAAKKRFEGLAAVYEKEVAGAADGA 65 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSH----H---HHHHHHHHHHHHHHHHHHHSTTCTTTH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCH----H---HHHHHHHHHHHHHHHHHHhcccCCHHH
Confidence 6899999999999999998753 63 688898741 1 12222111 1000
Q ss_pred -------cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCC
Q 006454 450 -------HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQ 504 (644)
Q Consensus 450 -------~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~ 504 (644)
.....++.|+++. .|++|=+-...-...+++++.+.+....-.|+ .||-.+.
T Consensus 66 ~~~~~~~i~~~~~~~~~~~~--aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il-~s~tS~~ 124 (283)
T 4e12_A 66 AQKALGGIRYSDDLAQAVKD--ADLVIEAVPESLDLKRDIYTKLGELAPAKTIF-ATNSSTL 124 (283)
T ss_dssp HHHHHHHCEEESCHHHHTTT--CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEE-EECCSSS
T ss_pred HHHHHcCeEEeCCHHHHhcc--CCEEEEeccCcHHHHHHHHHHHHhhCCCCcEE-EECCCCC
Confidence 0123578888876 89888432211114566777776655444444 3444443
No 36
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=94.85 E-value=0.061 Score=55.99 Aligned_cols=95 Identities=23% Similarity=0.303 Sum_probs=74.3
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCC
Q 006454 361 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL 439 (644)
Q Consensus 361 QGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L 439 (644)
.|-.-++-.|++-.++..+.+|+..++|++|+|. .|..+|.+|... |. .+++++++ .
T Consensus 142 ~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~-------T--- 199 (300)
T 4a26_A 142 PPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG-------T--- 199 (300)
T ss_dssp CSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------S---
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------C---
Confidence 3445678888999999999999999999999876 899999998752 42 48888872 1
Q ss_pred chhhhhhccccCCCCCHH--HHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 006454 440 QHFKKPWAHEHEPVKELV--DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 440 ~~~k~~fA~~~~~~~~L~--eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 499 (644)
.+|. +.++. +|++|...+.++.++.++|+ +.-+|+=++
T Consensus 200 --------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 --------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp --------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred --------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1355 88886 99999999999999998873 444555443
No 37
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.78 E-value=0.24 Score=52.49 Aligned_cols=102 Identities=20% Similarity=0.355 Sum_probs=63.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHH
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 460 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 460 (644)
++.+.+++|+|+|..|..+|..+... |. ++|+++|+. ..| .....+.+--+.-+..++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57889999999999999998887643 64 579988873 111 1111122211111224688888
Q ss_pred hccCCcEEEEccCCCC-CCCHHHHHH--HH-cCCCCcEEEecCCCC
Q 006454 461 NAIKPTILIGTSGQGR-TFTKEVVEA--MA-SLNEKPIIFSLSNPT 502 (644)
Q Consensus 461 ~~vkPtvLIG~S~~~g-~Fteevv~~--Ma-~~~erPIIFaLSNPt 502 (644)
+ +.|++|=+++.+. .++++.++. |. +...+-+++-++.|.
T Consensus 226 ~--~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 A--RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp H--TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred c--CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 6 4899998776553 457788887 43 222334555566553
No 38
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.63 E-value=0.039 Score=56.29 Aligned_cols=87 Identities=20% Similarity=0.259 Sum_probs=57.1
Q ss_pred HHHHHHHHHhC-CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc
Q 006454 369 AGLISAMKFLG-GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 447 (644)
Q Consensus 369 Agll~Alr~~g-~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA 447 (644)
.|++.+++..+ .+++..+++|+|||.+|.++|..|.. .|. ++++++|+. .+| .......+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 78999999999999888888777754 364 579998874 111 222222221
Q ss_pred cccCCC---CCHHHHHhccCCcEEEEccCCC
Q 006454 448 HEHEPV---KELVDAVNAIKPTILIGTSGQG 475 (644)
Q Consensus 448 ~~~~~~---~~L~eaV~~vkPtvLIG~S~~~ 475 (644)
...... .++.++++. .|++|-+.+.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 100011 245566654 89999887765
No 39
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.63 E-value=0.021 Score=51.16 Aligned_cols=88 Identities=14% Similarity=0.217 Sum_probs=50.5
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch
Q 006454 362 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 441 (644)
Q Consensus 362 GTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~ 441 (644)
|-.+|+.+++-.+-+.. ..|++|+|+|..|..++..+.. .|. + ++++|+. .++ ...
T Consensus 4 ~~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~ 59 (144)
T 3oj0_A 4 GKVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRA 59 (144)
T ss_dssp CCCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHH
T ss_pred CcccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHH
Confidence 33445555443333322 7899999999999888776643 242 4 8888873 111 222
Q ss_pred hhhhhccccCCCCCHHHHHhccCCcEEEEccCCC
Q 006454 442 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQG 475 (644)
Q Consensus 442 ~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~ 475 (644)
+.+.+.-+.....++.++++. .|++|=+++.+
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~ 91 (144)
T 3oj0_A 60 FAEKYEYEYVLINDIDSLIKN--NDVIITATSSK 91 (144)
T ss_dssp HHHHHTCEEEECSCHHHHHHT--CSEEEECSCCS
T ss_pred HHHHhCCceEeecCHHHHhcC--CCEEEEeCCCC
Confidence 222221111234578888875 88888665543
No 40
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.21 E-value=0.23 Score=54.62 Aligned_cols=124 Identities=17% Similarity=0.251 Sum_probs=87.5
Q ss_pred cCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCcc
Q 006454 358 DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE 437 (644)
Q Consensus 358 DDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~ 437 (644)
+.+.|+......|+ .+..|..+...+++|+|.|..|.++|+.+... |+ +++.+|++.. +.
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~~- 293 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----CA- 293 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----HH-
T ss_pred hchHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----hH-
Confidence 34445555556663 25678899999999999999999999998653 53 5888887521 00
Q ss_pred CCchhhhhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 006454 438 SLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 514 (644)
Q Consensus 438 ~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~ 514 (644)
+. .+...-...+|.|+++. .|++|.+....+.++++.++.|. +.-||.=.+.-. .|+.-++..+
T Consensus 294 -~~-----a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 294 -IQ-----AVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp -HH-----HHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred -HH-----HHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 00 11111122479999986 99999998888899999999884 567888777654 6667766665
No 41
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=94.14 E-value=0.17 Score=53.63 Aligned_cols=163 Identities=17% Similarity=0.204 Sum_probs=104.2
Q ss_pred hhhHHHHHHHHHHHHHhcCCCccceecccCCCCcHH---HHHHHHcC---CCcee---ecCCcchHHHHHHHHHHHHHHh
Q 006454 308 QEYAELLHEFMTAVKQNYGERILIQVFEDFANHNAF---DLLEKYGT---THLVF---NDDIQGTASVVLAGLISAMKFL 378 (644)
Q Consensus 308 ~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nAf---~lL~ryr~---~~~~F---NDDiQGTaaVvLAgll~Alr~~ 378 (644)
.+-++++..|.+++.+..|+. |= =+|++.. .. -+.+.|+. +-..+ .|--.-||-=+.-++-.+++..
T Consensus 93 ~~~e~~~r~~~~~~~~l~g~~--ip-a~D~gt~-~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~ 168 (355)
T 1c1d_A 93 STWARILRIHAENIDKLSGNY--WT-GPDVNTN-SADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHR 168 (355)
T ss_dssp HHHHHHHHHHHHHHHHTTTSE--EE-EECTTCC-HHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHhcCCc--cc-CCCCCCC-HHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhc
Confidence 455677888888888877763 33 5899763 33 24555551 11111 1111236666666778888889
Q ss_pred CC-CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHH
Q 006454 379 GG-SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV 457 (644)
Q Consensus 379 g~-~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ 457 (644)
|. .|++.+++|.|.|..|..+|+.+.. .|. ++++.|++ ..| .++.+.|- ...-++.
T Consensus 169 G~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~----~~~a~~~g---a~~v~~~ 225 (355)
T 1c1d_A 169 GLGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER----VAHAVALG---HTAVALE 225 (355)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH----HHHHHHTT---CEECCGG
T ss_pred CCCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH----HHHHHhcC---CEEeChH
Confidence 98 8999999999999999999988754 363 57788874 111 11222221 0111333
Q ss_pred HHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCC
Q 006454 458 DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTS 503 (644)
Q Consensus 458 eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pts 503 (644)
|..+ ++.|+|+=+ +.++.++++-++.| +-.+|.--+| |+.
T Consensus 226 ell~-~~~DIliP~-A~~~~I~~~~~~~l----k~~iVie~AN~p~t 266 (355)
T 1c1d_A 226 DVLS-TPCDVFAPC-AMGGVITTEVARTL----DCSVVAGAANNVIA 266 (355)
T ss_dssp GGGG-CCCSEEEEC-SCSCCBCHHHHHHC----CCSEECCSCTTCBC
T ss_pred Hhhc-CccceecHh-HHHhhcCHHHHhhC----CCCEEEECCCCCCC
Confidence 4333 578999954 45679999999998 3568887777 653
No 42
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.09 E-value=0.67 Score=50.99 Aligned_cols=178 Identities=15% Similarity=0.175 Sum_probs=119.7
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcHH--HHHHHHcC---C-Ccee----------ecCCcchHHHHHH
Q 006454 306 IGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNAF--DLLEKYGT---T-HLVF----------NDDIQGTASVVLA 369 (644)
Q Consensus 306 ~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nAf--~lL~ryr~---~-~~~F----------NDDiQGTaaVvLA 369 (644)
+..|...|-..||..+.+..||..=|- =+|++..-.. -+.+.|+. . ..|+ .++-.-||-=+.-
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~Dvp-ApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~ 237 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVP-AGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVY 237 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEE-ECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCcc-CCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHH
Confidence 456677788889999998889987676 7898764221 24455542 1 1111 1223457766777
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEccCCcccCCCccCCchh------
Q 006454 370 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLESLQHF------ 442 (644)
Q Consensus 370 gll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~-lvDs~GLi~~~R~~~L~~~------ 442 (644)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +++ +.|++|-|+... .|+..
T Consensus 238 ~~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~edl~~l~ 303 (470)
T 2bma_A 238 FVLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTHENLEFLI 303 (470)
T ss_dssp HHHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCHHHHHHHH
T ss_pred HHHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCHHHHHHHH
Confidence 7888899999999999999999999999999998653 53 444 888888888753 34222
Q ss_pred --h-------hhhcccc---CCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 006454 443 --K-------KPWAHEH---EPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 502 (644)
Q Consensus 443 --k-------~~fA~~~---~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 502 (644)
| ..|+... +.... .+.. .++.||||=+.. ++..|++-++.+-+ |.-.+|.--+| |+
T Consensus 304 ~~k~~~~g~v~~~~~~~~~a~~v~~-~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 304 DLKEEKKGRIKEYLNHSSTAKYFPN-EKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HHHTTTTCCGGGGGGTCSSCEECSS-CCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHHhcCCcHHHHHhhcCCcEEecC-cCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 1 1222100 00000 1222 568999998885 66999999999854 46679998888 55
No 43
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=93.96 E-value=1.2 Score=48.07 Aligned_cols=178 Identities=18% Similarity=0.144 Sum_probs=117.4
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcH--HHHHHHHc---CC--Cceee----------cCCcchHHHHH
Q 006454 306 IGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNA--FDLLEKYG---TT--HLVFN----------DDIQGTASVVL 368 (644)
Q Consensus 306 ~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nA--f~lL~ryr---~~--~~~FN----------DDiQGTaaVvL 368 (644)
+.+|-..|...|+.++.+.-||..-|= =+|++..-. --+.+.|+ .. ..++- +.-.-||-=+.
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvp-a~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 193 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIP-APDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVK 193 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEEC-CBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEe-CCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHH
Confidence 445677889999999999888877776 789986421 12344552 11 12332 22234666666
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhh-hhhc
Q 006454 369 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK-KPWA 447 (644)
Q Consensus 369 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k-~~fA 447 (644)
-++-.+++..|.+++..||+|.|.|..|...|++|.+ +.|. +=+-+.|++|-|++... |+... +.+.
T Consensus 194 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e----~~Ga------kvVavsD~~G~i~dp~G--ld~~~l~~~~ 261 (415)
T 2tmg_A 194 VCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQ----ELGS------KVVAVSDSRGGIYNPEG--FDVEELIRYK 261 (415)
T ss_dssp HHHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHH----TTCC------EEEEEECSSCEEECTTC--CCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHH----hcCC------EEEEEEeCCCeEECCCC--CCHHHHHHHH
Confidence 6778888999999999999999999999999998865 1253 33448999999987642 33311 1121
Q ss_pred cccCC--------CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 006454 448 HEHEP--------VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 502 (644)
Q Consensus 448 ~~~~~--------~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 502 (644)
..... .-+-.| +-.++.|+||=+.. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 262 ~~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 262 KEHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HHSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred HhhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 11110 012334 45678999997776 558888877766 4567777777 55
No 44
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=93.90 E-value=0.098 Score=52.47 Aligned_cols=144 Identities=15% Similarity=0.312 Sum_probs=82.2
Q ss_pred HHHHHHHHHHhcC--------CCccceecccCCCCcHHHHHH--HHcCCCceeecCCcchHHHHHHHHHHHHHHhCCCCC
Q 006454 314 LHEFMTAVKQNYG--------ERILIQVFEDFANHNAFDLLE--KYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLA 383 (644)
Q Consensus 314 idefv~Av~~~fG--------p~~lIq~fEDf~~~nAf~lL~--ryr~~~~~FNDDiQGTaaVvLAgll~Alr~~g~~L~ 383 (644)
+++|++.++..|. -..++. +=|- ++.|..+=. ....+ .=+|-|- .|++.+|+.. .++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~-~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~ 108 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMR-YVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVK 108 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGG-GSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCC
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHH-HhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCC
Confidence 4667776664442 233455 5565 666654410 00011 3345553 3677777654 577
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhcc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 463 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 463 (644)
+ +++|+|||.+|.+++..|.. .|. ++|+++|+. .+|.+.|.. .|.. ....++.++++.
T Consensus 109 ~-~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la~---~~~~--~~~~~~~~~~~~- 166 (253)
T 3u62_A 109 E-PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALDF---PVKI--FSLDQLDEVVKK- 166 (253)
T ss_dssp S-SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCCS---SCEE--EEGGGHHHHHHT-
T ss_pred C-eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHHH---Hccc--CCHHHHHhhhcC-
Confidence 8 99999999999998887765 364 679999984 222222221 1110 123467788875
Q ss_pred CCcEEEEccCCC-----CCCCHHHHHHHHcCCCCcEEEecC
Q 006454 464 KPTILIGTSGQG-----RTFTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 464 kPtvLIG~S~~~-----g~Fteevv~~Ma~~~erPIIFaLS 499 (644)
+|++|-++..+ ..+..+.+ .+..+|+-++
T Consensus 167 -aDiVInatp~gm~p~~~~i~~~~l------~~~~~V~Div 200 (253)
T 3u62_A 167 -AKSLFNTTSVGMKGEELPVSDDSL------KNLSLVYDVI 200 (253)
T ss_dssp -CSEEEECSSTTTTSCCCSCCHHHH------TTCSEEEECS
T ss_pred -CCEEEECCCCCCCCCCCCCCHHHh------CcCCEEEEee
Confidence 99999766543 12343333 2456666654
No 45
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=93.79 E-value=0.13 Score=53.03 Aligned_cols=98 Identities=13% Similarity=0.269 Sum_probs=75.2
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc
Q 006454 362 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 440 (644)
Q Consensus 362 GTaaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~ 440 (644)
+-.-+|-.|++-.++..|.+++..++|++|+|. .|.-+|.++.. .|. -..+++++++
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 445677888999999999999999999999996 58888877753 210 1458887542
Q ss_pred hhhhhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 006454 441 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNP 501 (644)
Q Consensus 441 ~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNP 501 (644)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 234 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVS 234 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCC
Confidence 1468899986 99999999999999999874 34567666654
No 46
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.73 E-value=0.22 Score=50.26 Aligned_cols=110 Identities=18% Similarity=0.205 Sum_probs=72.3
Q ss_pred HHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCC
Q 006454 375 MKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVK 454 (644)
Q Consensus 375 lr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~ 454 (644)
++..+..|.+.+++|+|+|..|..+|+.+.. .|. +++.+|+.- .+ +...+..-++. ....
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~~~g~~~-~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAA-----LGA-------NVKVGARSS----AH---LARITEMGLVP-FHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHHHHHTTCEE-EEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHH-----CCC-------EEEEEECCH----HH---HHHHHHCCCeE-Echh
Confidence 4456889999999999999999999998864 253 688888741 11 11111100110 0124
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHH
Q 006454 455 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEA 512 (644)
Q Consensus 455 ~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA 512 (644)
+|.|+++. .|++|-+... +.++++.++.|. +..+|+=+|.-. .+|..+.+
T Consensus 208 ~l~~~l~~--aDvVi~~~p~-~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a 257 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIPS-MILNQTVLSSMT---PKTLILDLASRP--GGTDFKYA 257 (300)
T ss_dssp GHHHHSTT--CSEEEECCSS-CCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHH
T ss_pred hHHHHhhC--CCEEEECCCh-hhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHH
Confidence 68888875 9999977664 689998887774 567888888532 34445444
No 47
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=93.70 E-value=0.41 Score=51.91 Aligned_cols=177 Identities=18% Similarity=0.191 Sum_probs=115.0
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcHHH---HHHHHcC-----CCceeecC----------CcchHHHH
Q 006454 306 IGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNAFD---LLEKYGT-----THLVFNDD----------IQGTASVV 367 (644)
Q Consensus 306 ~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nAf~---lL~ryr~-----~~~~FNDD----------iQGTaaVv 367 (644)
+.+|-..|...|+.++.+.-||..-|= =+|++.. +.+ +.+.|+. ...++.-+ -.-||-=+
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvp-A~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv 193 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIP-APDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGV 193 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEE-ECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEe-CCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHH
Confidence 456678889999999999888887777 7999873 222 3355531 11223222 12366666
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEccCCcccCCCccCCc---hhh
Q 006454 368 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLESLQ---HFK 443 (644)
Q Consensus 368 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~-lvDs~GLi~~~R~~~L~---~~k 443 (644)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +++ +.|++|-|++...=+++ .++
T Consensus 194 ~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~Ga-------kVVavsD~~G~i~dp~GlD~~~l~~~k 261 (421)
T 1v9l_A 194 AVATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MGA-------KVIAVSDINGVAYRKEGLNVELIQKNK 261 (421)
T ss_dssp HHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSSCEEECTTCCCTHHHHHTT
T ss_pred HHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEECCCcEEECCCCCCHHHHHHHH
Confidence 66777888889999999999999999999999988864 353 455 89999999876421121 122
Q ss_pred hh--------hcccc--CCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 006454 444 KP--------WAHEH--EPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 502 (644)
Q Consensus 444 ~~--------fA~~~--~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 502 (644)
.. |.... ....+-.| +-.++.|+|+=+.. ++..|++-++.+ .-.||.--+| |+
T Consensus 262 ~~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~ 325 (421)
T 1v9l_A 262 GLTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPT 325 (421)
T ss_dssp TSCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCB
T ss_pred HhhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcC
Confidence 11 11000 11101122 33468899997664 568888777766 5678888887 55
No 48
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.58 E-value=0.17 Score=52.69 Aligned_cols=96 Identities=20% Similarity=0.294 Sum_probs=63.6
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcccc----CCCCCHH
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH----EPVKELV 457 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~----~~~~~L~ 457 (644)
++..+++|+|||.+|.+++..+.. .| | +++++|+. ..| ++..+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 667899999999999999888764 35 2 68889874 122 223333333210 1113566
Q ss_pred HHHhccCCcEEEEccCCCCC-----CCHHHHHHHHcCCCCcEEEecCCC
Q 006454 458 DAVNAIKPTILIGTSGQGRT-----FTKEVVEAMASLNEKPIIFSLSNP 501 (644)
Q Consensus 458 eaV~~vkPtvLIG~S~~~g~-----Fteevv~~Ma~~~erPIIFaLSNP 501 (644)
+.++ +.|++|.+.+.++. ++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~--~~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVA--EADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHH--TCSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHc--CCCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 7776 48999999877653 5888888874 45577777754
No 49
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.35 E-value=0.23 Score=51.39 Aligned_cols=123 Identities=15% Similarity=0.204 Sum_probs=70.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhh-------hccc-------
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP-------WAHE------- 449 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~-------fA~~------- 449 (644)
-+||.|+|+|..|.+||..++.. |. +++++|.+- +.++..+.. ++..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~~-------~~~~~~~~~i~~~l~~l~~~G~~~g~~ 66 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEP-------RQITGALENIRKEMKSLQQSGSLKGSL 66 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCH-------HHHHHHHHHHHHHHHHHHHTTCCCSSS
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCCH-------HHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 36899999999999999998753 64 588888741 111111110 0000
Q ss_pred --------cCCCCCHHHHHhccCCcEEEEccCCCC-CCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcE
Q 006454 450 --------HEPVKELVDAVNAIKPTILIGTSGQGR-TFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRA 520 (644)
Q Consensus 450 --------~~~~~~L~eaV~~vkPtvLIG~S~~~g-~Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~Gra 520 (644)
.....++.|+++. .|++|= +.... .+.+++++.+.++...-.|++ ||=++ .++.+..+......
T Consensus 67 ~~~~~~~~i~~~~~~~eav~~--aDlVie-avpe~~~~k~~v~~~l~~~~~~~~Ii~-s~tS~---i~~~~la~~~~~~~ 139 (319)
T 2dpo_A 67 SAEEQLSLISSCTNLAEAVEG--VVHIQE-CVPENLDLKRKIFAQLDSIVDDRVVLS-SSSSC---LLPSKLFTGLAHVK 139 (319)
T ss_dssp CHHHHHHTEEEECCHHHHTTT--EEEEEE-CCCSCHHHHHHHHHHHHTTCCSSSEEE-ECCSS---CCHHHHHTTCTTGG
T ss_pred chHHHhhceEEeCCHHHHHhc--CCEEEE-eccCCHHHHHHHHHHHHhhCCCCeEEE-EeCCC---hHHHHHHHhcCCCC
Confidence 0123589999986 788773 33222 245677788877665444554 44222 44555555443222
Q ss_pred EEeeCCCCCCcc
Q 006454 521 IFASGSPFDPFE 532 (644)
Q Consensus 521 ifASGSPF~pV~ 532 (644)
=|.-+-||.|+.
T Consensus 140 r~ig~Hp~~P~~ 151 (319)
T 2dpo_A 140 QCIVAHPVNPPY 151 (319)
T ss_dssp GEEEEEECSSTT
T ss_pred CeEEeecCCchh
Confidence 233445787774
No 50
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.15 E-value=0.17 Score=53.58 Aligned_cols=159 Identities=14% Similarity=0.127 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHhcCCCccceecccCCCCcHHHHHHHHcCCC-ceeecC---------CcchHHHHHHHHHHHHHHh-C
Q 006454 311 AELLHEFMTAVKQNYGERILIQVFEDFANHNAFDLLEKYGTTH-LVFNDD---------IQGTASVVLAGLISAMKFL-G 379 (644)
Q Consensus 311 ~~fidefv~Av~~~fGp~~lIq~fEDf~~~nAf~lL~ryr~~~-~~FNDD---------iQGTaaVvLAgll~Alr~~-g 379 (644)
++++..|.+++.+..|+. |- =+|++..- . .+...-+++ ++---- ..-||--+.-++..+++.. |
T Consensus 93 ~~~~r~~~~~~~~l~g~~--i~-A~D~Gt~~-~-~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G 167 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGRY--IT-AEDVGTTV-D-DMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFG 167 (364)
T ss_dssp HHHHHHHHHHHHTTTTSE--EB-CBCTTCCH-H-HHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCce--EE-cccCCCCH-H-HHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhcc
Confidence 456677777777777763 34 57987543 2 333333333 211111 1235555555666666664 7
Q ss_pred C-CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHH
Q 006454 380 G-SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 458 (644)
Q Consensus 380 ~-~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 458 (644)
. +|++.+|+|.|+|..|..+|+.+.+. |. ++++.|++ + +.+..+...|--+ .-++.+
T Consensus 168 ~~~L~GktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~------~-~~l~~~a~~~ga~---~v~~~~ 225 (364)
T 1leh_A 168 SDSLEGLAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN------K-AAVSAAVAEEGAD---AVAPNA 225 (364)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC------H-HHHHHHHHHHCCE---ECCGGG
T ss_pred ccCCCcCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC------H-HHHHHHHHHcCCE---EEChHH
Confidence 6 89999999999999999999998653 63 47788853 1 1233333332111 112223
Q ss_pred HHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 006454 459 AVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 502 (644)
Q Consensus 459 aV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 502 (644)
.. ..+.|++|=+ +..+.++++.++.| .-.+|.--+| |+
T Consensus 226 ll-~~~~DIvip~-a~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 226 IY-GVTCDIFAPC-ALGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp TT-TCCCSEEEEC-SCSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred Hh-ccCCcEeecc-chHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 22 2578999965 45668999888887 3467776666 54
No 51
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=93.14 E-value=0.34 Score=49.81 Aligned_cols=101 Identities=22% Similarity=0.306 Sum_probs=65.7
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCC---CCCHHHHHh
Q 006454 386 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAVN 461 (644)
Q Consensus 386 riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~---~~~L~eaV~ 461 (644)
||+|+|| |..|..++..|+. .|+ ...++|+|.+-. .+...+|.+...+ . +... ..++.|+++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 8999998 9999998877652 354 367999998641 1000012221100 0 0011 136888998
Q ss_pred ccCCcEEEEccCCCC--------------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 462 AIKPTILIGTSGQGR--------------TFTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 462 ~vkPtvLIG~S~~~g--------------~Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
. .|+.|=+.+.+. ...+++++.|.+++...+|+=.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 7 899885555443 23567888888889888888899998
No 52
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=93.11 E-value=1.8 Score=47.28 Aligned_cols=178 Identities=17% Similarity=0.181 Sum_probs=117.0
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcHH--HHHHHHc---CC--Cceeec----------CCcchHHHHHH
Q 006454 307 GQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNAF--DLLEKYG---TT--HLVFND----------DIQGTASVVLA 369 (644)
Q Consensus 307 g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nAf--~lL~ryr---~~--~~~FND----------DiQGTaaVvLA 369 (644)
..|-..|-..||..+.+..||..-|- =+|++..-.. -+.+.|+ .. .-|+-. .-.-||-=+.-
T Consensus 137 ~~e~~r~~r~f~~~L~~~ig~~~dvp-A~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~ 215 (449)
T 1bgv_A 137 DREVMRFCQAFMTELYRHIGPDIDVP-AGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVY 215 (449)
T ss_dssp HHHHHHHHHHHHHHHGGGCBTTTEEE-ECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhheeCCCCcCC-CCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHH
Confidence 45677788889999988889988887 8999875211 1233443 21 122211 22346666666
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCC-chh------
Q 006454 370 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL-QHF------ 442 (644)
Q Consensus 370 gll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L-~~~------ 442 (644)
++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +=+-+.|++|-|++.. .| ++.
T Consensus 216 ~~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~ 282 (449)
T 1bgv_A 216 YVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYML 282 (449)
T ss_dssp HHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHH
T ss_pred HHHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHH
Confidence 7788889999999999999999999999999888653 53 3344789999888753 24 221
Q ss_pred --h-------hhhccc--cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 006454 443 --K-------KPWAHE--HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 502 (644)
Q Consensus 443 --k-------~~fA~~--~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 502 (644)
+ ..|+.. .+... -.+ +-.++.|+|+=+.. ++..|++-.+.+.+ |.-.+|.-=+| |+
T Consensus 283 ~~k~~~~g~v~~y~~~~~a~~i~-~~e-~~~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 283 EMRASGRNKVQDYADKFGVQFFP-GEK-PWGQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHHCCCCTHHHHHHHTCEEEE-TCC-GGGSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhccCCChhhcccccCCEEeC-chh-hhcCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 1 111110 00000 001 22568999997775 66999999999864 34578888888 65
No 53
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.06 E-value=0.18 Score=52.11 Aligned_cols=102 Identities=20% Similarity=0.281 Sum_probs=67.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCcc----CCchhhhhhccccCC---CCCHH
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEP---VKELV 457 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~~~---~~~L~ 457 (644)
.||.|+|||+.|.++|.+++.. |+ -+++|+|.+- ++-+ .+.+.. .+...... ..++.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~----~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ 73 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVK----GMPEGKALDLSHVT-SVVDTNVSVRAEYSYE 73 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHHH-HHTTCCCCEEEECSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECCh----hHHHHHHHHHHhhh-hccCCCCEEEEeCCHH
Confidence 5899999999999999998763 54 1399999862 2111 011111 11111111 25788
Q ss_pred HHHhccCCcEEEEccCCC---CC----------------CCHHHHHHHHcCCCCcEEEecCCCCCC
Q 006454 458 DAVNAIKPTILIGTSGQG---RT----------------FTKEVVEAMASLNEKPIIFSLSNPTSQ 504 (644)
Q Consensus 458 eaV~~vkPtvLIG~S~~~---g~----------------Fteevv~~Ma~~~erPIIFaLSNPts~ 504 (644)
|+++. .|++|=+.+.+ |. .-+++.+.|.++++.-+|+=-|||..-
T Consensus 74 ea~~~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~ 137 (331)
T 1pzg_A 74 AALTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDC 137 (331)
T ss_dssp HHHTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH
T ss_pred HHhCC--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHH
Confidence 88886 89988665444 22 146888889999988888888999843
No 54
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=92.88 E-value=0.15 Score=52.08 Aligned_cols=104 Identities=20% Similarity=0.287 Sum_probs=65.6
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc
Q 006454 369 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 448 (644)
Q Consensus 369 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 448 (644)
.|++.+|+..|.++++.+++++|||.+|.+++..|.. .|. ++|+++++. .+|.+ .+|.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt----~~ka~-------~La~ 164 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN----PEKTS-------EIYG 164 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC----HHHHH-------HHCT
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHH-------HHHH
Confidence 7889999988999999999999999888888877764 364 689999874 22211 1221
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCCC-------CCCHHHHHHHHcCCCCcEEEecC-CCC
Q 006454 449 EHEPVKELVDAVNAIKPTILIGTSGQGR-------TFTKEVVEAMASLNEKPIIFSLS-NPT 502 (644)
Q Consensus 449 ~~~~~~~L~eaV~~vkPtvLIG~S~~~g-------~Fteevv~~Ma~~~erPIIFaLS-NPt 502 (644)
.-. ..++.+.-+ +++|++|-++..|= .+..+.+ .+..++|=+. ||.
T Consensus 165 ~~~-~~~~~~l~~-l~~DivInaTp~Gm~~~~~~~pi~~~~l------~~~~~v~DlvY~P~ 218 (282)
T 3fbt_A 165 EFK-VISYDELSN-LKGDVIINCTPKGMYPKEGESPVDKEVV------AKFSSAVDLIYNPV 218 (282)
T ss_dssp TSE-EEEHHHHTT-CCCSEEEECSSTTSTTSTTCCSSCHHHH------TTCSEEEESCCSSS
T ss_pred hcC-cccHHHHHh-ccCCEEEECCccCccCCCccCCCCHHHc------CCCCEEEEEeeCCC
Confidence 100 112333222 37999998776541 1344433 2456777664 653
No 55
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=92.84 E-value=0.19 Score=54.94 Aligned_cols=42 Identities=24% Similarity=0.350 Sum_probs=29.8
Q ss_pred HHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEee
Q 006454 480 KEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFAS 524 (644)
Q Consensus 480 eevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~GraifAS 524 (644)
.++++.|.++|+.-+++=.|||. +-+|- -+.++++=++|=..
T Consensus 140 ~~i~~~i~~~~P~A~~in~tNP~--~i~t~-a~~~~~~~k~vGlC 181 (477)
T 3u95_A 140 LEIAEKMKKMAPKAYLMQTANPV--FEITQ-AVRRWTGANIIGFC 181 (477)
T ss_dssp HHHHHHHHHHCTTCEEEECSSCH--HHHHH-HHHHHHCCCEEEEC
T ss_pred HHHHHHHHhhCCCeEEEEecChH--HHHHH-HHHHhCCCCeEEEC
Confidence 68999999999999999999998 44443 23444544444333
No 56
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.80 E-value=0.16 Score=51.74 Aligned_cols=50 Identities=20% Similarity=0.252 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 368 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 368 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
-.|++.+|+..|.++++.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 110 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 110 GEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred HHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 46788888888999999999999999888777776654 364 679999884
No 57
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.39 E-value=0.17 Score=51.23 Aligned_cols=98 Identities=19% Similarity=0.250 Sum_probs=60.6
Q ss_pred HHHHHHHHHH-hcCCCccceecccCCCCcHHHHHHHHc---------CCCceeecC-CcchHHHHHHHHHHH-HHHhCCC
Q 006454 314 LHEFMTAVKQ-NYGERILIQVFEDFANHNAFDLLEKYG---------TTHLVFNDD-IQGTASVVLAGLISA-MKFLGGS 381 (644)
Q Consensus 314 idefv~Av~~-~fGp~~lIq~fEDf~~~nAf~lL~ryr---------~~~~~FNDD-iQGTaaVvLAgll~A-lr~~g~~ 381 (644)
+.++++.++. .|+. ++ -.---...++++|++.. +.+ ++.|+ ..|.-.= -.|++.+ |+..|.+
T Consensus 44 l~~~~~~~~~~~~~G---~n-VTiP~K~~v~~~~d~l~~~A~~iGAvNTv-~~~~g~l~G~NTD-~~G~~~~lL~~~~~~ 117 (272)
T 3pwz_A 44 FEAQVLQFRSEGGKG---MN-ITAPFKLRAFELADRRSERAQLARAANAL-KFEDGRIVAENFD-GIGLLRDIEENLGEP 117 (272)
T ss_dssp HHHHHHHHHHTTCCE---EE-ECTTCHHHHHHHCSEECHHHHHHTCCSEE-EEETTEEEEECCH-HHHHHHHHHTTSCCC
T ss_pred HHHHHHHHhhCCCCE---EE-ECchhHHHHHHHHhhCCHHHHHhCccceE-EccCCeEEEecCC-HHHHHHHHHHHcCCC
Confidence 4667776653 4533 33 12222234555555432 122 33333 3553332 4588888 8888889
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+++.+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred ccCCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 999999999999887777776654 364 679988874
No 58
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=92.35 E-value=1.2 Score=47.48 Aligned_cols=188 Identities=11% Similarity=0.083 Sum_probs=110.3
Q ss_pred CCceeecCC---cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 352 THLVFNDDI---QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 352 ~~~~FNDDi---QGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+.+.|.-- +.+|=-+++.+|+..|..|..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 455555432 2344458999999999999999999999999999999999988642 64 58888863
Q ss_pred CcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEcc---C-----CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 006454 429 GLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS---G-----QGRTFTKEVVEAMASLNEKPIIFSLSN 500 (644)
Q Consensus 429 GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S---~-----~~g~Fteevv~~Ma~~~erPIIFaLSN 500 (644)
.- . . . ......+|.|+++. .|+++=.- . ..+.|+++.++.|. +..+|.=.|.
T Consensus 149 ~~------~----~--~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~sR 208 (380)
T 2o4c_A 149 RQ------A----R--E---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNASR 208 (380)
T ss_dssp HH------H----H--S---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECSC
T ss_pred hh------h----h--c---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECCC
Confidence 10 0 0 0 01123579999986 89887542 1 34688999998884 5667776664
Q ss_pred CCCCCCCCHHHHhcccCCcEEEeeCCCC--CCcccCCeeecccCCCccccchhhhHHHHHhCCcccCHHHHHHHHHHHHc
Q 006454 501 PTSQSECTAEEAYTWSQGRAIFASGSPF--DPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAG 578 (644)
Q Consensus 501 Pts~aEct~edA~~wT~GraifASGSPF--~pV~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~ 578 (644)
-.---|-.-.+|+ .+|+..-|.=-=| +|. .+.. .. + +|..+-|=++--...+ -..|...+++.+..
T Consensus 209 G~vvd~~aL~~aL--~~g~i~~A~LDV~~~EP~-~~~~-l~--~-~nvi~TPHiag~t~e~-----~~~~~~~~~~nl~~ 276 (380)
T 2o4c_A 209 GAVVDNQALRRLL--EGGADLEVALDVWEGEPQ-ADPE-LA--A-RCLIATPHIAGYSLEG-----KLRGTAQIYQAYCA 276 (380)
T ss_dssp GGGBCHHHHHHHH--HTTCCEEEEESCCTTTTS-CCHH-HH--T-TCSEECSSCTTCCHHH-----HHHHHHHHHHHHHH
T ss_pred CcccCHHHHHHHH--HhCCCceEEeeeeccCCC-Cchh-hc--c-CCEEEccccCcCCHHH-----HHHHHHHHHHHHHH
Confidence 2211111122233 3455433311111 110 1111 11 1 4788888776322211 23455556666666
Q ss_pred ccCcc
Q 006454 579 QVTQE 583 (644)
Q Consensus 579 ~v~~e 583 (644)
....+
T Consensus 277 ~l~g~ 281 (380)
T 2o4c_A 277 WRGIA 281 (380)
T ss_dssp HHTCC
T ss_pred HHcCC
Confidence 65433
No 59
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.30 E-value=0.17 Score=51.62 Aligned_cols=100 Identities=15% Similarity=0.290 Sum_probs=64.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccC----CchhhhhhccccCC---CCCHH
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES----LQHFKKPWAHEHEP---VKELV 457 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~----L~~~k~~fA~~~~~---~~~L~ 457 (644)
.||.|+|||+.|.++|..++.. |+ .+++++|.+- ++.+. +.+. ..+...... ..++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GIPQGKALDITHS-MVMFGSTSKVIGTDDY- 67 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHH-HHHHTCCCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 5899999999999999998754 54 2599999852 21110 1110 011100111 1456
Q ss_pred HHHhccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 006454 458 DAVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTS 503 (644)
Q Consensus 458 eaV~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPts 503 (644)
++++. +|++|=+.+.+.. ..+++++.+.++++.-||+-.|||..
T Consensus 68 ~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 68 ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 67765 8988866544431 24678888888888889999999974
No 60
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.14 E-value=0.2 Score=49.00 Aligned_cols=109 Identities=15% Similarity=0.223 Sum_probs=61.8
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc--cCCCccCCc-hhhhhhccc--cCC
Q 006454 378 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI--VSSRLESLQ-HFKKPWAHE--HEP 452 (644)
Q Consensus 378 ~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi--~~~R~~~L~-~~k~~fA~~--~~~ 452 (644)
...++...||.|+|+|..|.++|..|... | .+++++|++-=- .+.....+. .....++.. ...
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45577889999999999999999998753 5 368888875211 000000000 001223322 122
Q ss_pred CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHH-HcCCCCcEEEecCCCC
Q 006454 453 VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAM-ASLNEKPIIFSLSNPT 502 (644)
Q Consensus 453 ~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~M-a~~~erPIIFaLSNPt 502 (644)
..++.|+++. +|++| ++-.+. ...++++.+ +..-+..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3578999986 88877 333332 345666666 4333667999999974
No 61
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.10 E-value=0.16 Score=51.42 Aligned_cols=102 Identities=15% Similarity=0.244 Sum_probs=62.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch---hhhhhccccCC--CCCHHHH
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH---FKKPWAHEHEP--VKELVDA 459 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~---~k~~fA~~~~~--~~~L~ea 459 (644)
.||.|+|||+.|..+|..|+.. |+ ...++++|++ .++.+.+.. +...+...... ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDAN----EAKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSS----HHHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCC----HHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999988653 54 2579999985 111111110 00011100001 1355 66
Q ss_pred HhccCCcEEEEccCCC-------CCC-----------CHHHHHHHHcCCCCcEEEecCCCCC
Q 006454 460 VNAIKPTILIGTSGQG-------RTF-----------TKEVVEAMASLNEKPIIFSLSNPTS 503 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~-------g~F-----------teevv~~Ma~~~erPIIFaLSNPts 503 (644)
++. .|++|=+...+ |.. -+++++.|.+++...+|+-+|||..
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 664 88887554432 211 1588888988888888888999984
No 62
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=92.07 E-value=0.37 Score=53.20 Aligned_cols=110 Identities=17% Similarity=0.300 Sum_probs=77.7
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch
Q 006454 362 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 441 (644)
Q Consensus 362 GTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~ 441 (644)
|+......|+ .+.+|..+...+++|+|.|..|.++|+.+.. .|+ +++.+|++.. + .++.
T Consensus 258 ~~~~~l~~gw---~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~-----~G~-------~V~v~d~~~~----~--~~~a 316 (494)
T 3d64_A 258 GCRESLVDGI---KRATDVMIAGKIAVVAGYGDVGKGCAQSLRG-----LGA-------TVWVTEIDPI----C--ALQA 316 (494)
T ss_dssp HHHTTHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECSCHH----H--HHHH
T ss_pred hhhhhhhhhh---hhccccccCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCChH----h--HHHH
Confidence 3434445552 3578999999999999999999999998853 253 5888887521 0 0000
Q ss_pred hhhhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 442 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 442 ~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
. ...-...+|.|+++. .|+++......+.++++.++.|. +.-||.=.+...
T Consensus 317 ~-----~~G~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 317 A-----MEGYRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp H-----TTTCEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred H-----HcCCEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 0 111112479999986 99999998778899999999994 567888777754
No 63
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=91.97 E-value=1.2 Score=48.00 Aligned_cols=114 Identities=24% Similarity=0.276 Sum_probs=80.0
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCccceecccCCCCcHHH---HHHHHc---CCC-c---eeecC----------CcchHH
Q 006454 306 IGQEYAELLHEFMTAVKQNYGERILIQVFEDFANHNAFD---LLEKYG---TTH-L---VFNDD----------IQGTAS 365 (644)
Q Consensus 306 ~g~eY~~fidefv~Av~~~fGp~~lIq~fEDf~~~nAf~---lL~ryr---~~~-~---~FNDD----------iQGTaa 365 (644)
+.+|-..|...|+.++.+.-||..-|= =+|++.. +.+ +.+.|. ... + ++--+ -.-||-
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~-a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~ 192 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIP-APDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATAR 192 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEC-CBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEe-CCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhh
Confidence 445778889999999999888877776 7898873 222 334552 221 2 33222 224666
Q ss_pred HHHHHHHHHHHHhCCC-CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEE-ccCCccc
Q 006454 366 VVLAGLISAMKFLGGS-LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLV-DSKGLIV 432 (644)
Q Consensus 366 VvLAgll~Alr~~g~~-L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lv-Ds~GLi~ 432 (644)
=+.-++..+++..|.+ |++.++.|+|.|..|..+|+++... .|+ +++.+ |+.|-++
T Consensus 193 Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 193 GASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEE
T ss_pred HHHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCcccc
Confidence 6667788889999999 9999999999999999999988641 254 34444 8877544
No 64
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=91.86 E-value=0.27 Score=49.87 Aligned_cols=48 Identities=33% Similarity=0.440 Sum_probs=40.2
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 369 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 369 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
.|++.+++..|.+++..|+|++|||-|+.+|+-.|.+ .|. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCC
Confidence 4567888889999999999999999999888877654 364 78999987
No 65
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=91.52 E-value=0.29 Score=53.35 Aligned_cols=106 Identities=17% Similarity=0.277 Sum_probs=67.4
Q ss_pred CCCceEEEeCcChH--HHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc---ccCCCCCH
Q 006454 382 LADQRFLFLGAGEA--GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH---EHEPVKEL 456 (644)
Q Consensus 382 L~d~riv~~GAGsA--G~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~---~~~~~~~L 456 (644)
++..||.|+|||+. |.|++..|+.. ..+ . ..|+|+|.+- ++-+.+....+.+.+ .-.-..++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 45679999999995 78999888742 122 2 3899999851 110001111111111 00112589
Q ss_pred HHHHhccCCcEEEEccCCC---------------CCC---------------------CHHHHHHHHcCCCCcEEEecCC
Q 006454 457 VDAVNAIKPTILIGTSGQG---------------RTF---------------------TKEVVEAMASLNEKPIIFSLSN 500 (644)
Q Consensus 457 ~eaV~~vkPtvLIG~S~~~---------------g~F---------------------teevv~~Ma~~~erPIIFaLSN 500 (644)
.||++. +|.+|=.-.+| |.. -.++++.|.+++..-+|+-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999987 89887544332 221 3577788889999999999999
Q ss_pred CC
Q 006454 501 PT 502 (644)
Q Consensus 501 Pt 502 (644)
|.
T Consensus 148 Pv 149 (450)
T 3fef_A 148 PM 149 (450)
T ss_dssp SH
T ss_pred ch
Confidence 98
No 66
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=91.08 E-value=2 Score=44.07 Aligned_cols=121 Identities=16% Similarity=0.129 Sum_probs=80.6
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhc
Q 006454 351 TTHLVFNDDI---QGTASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQT 411 (644)
Q Consensus 351 ~~~~~FNDDi---QGTaaVvLAgll~Alr~----------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~ 411 (644)
..+.+.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~----- 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM----- 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----
Confidence 3556666432 23444588888888775 35689999999999999999999988642
Q ss_pred CCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHHHHH
Q 006454 412 NMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVEAMA 487 (644)
Q Consensus 412 Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~~Ma 487 (644)
|+ +++.+|+.. . . . ..+ .+ .-...+|.|+++. .|+++=.-- ..+.++++.++.|.
T Consensus 165 G~-------~V~~~d~~~----~--~-~-~~~-~~---g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD----I--R-E-KAE-KI---NAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC----C--H-H-HHH-HT---TCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc----c--h-h-HHH-hc---CceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 64 588888741 1 0 0 011 11 1111378898886 898885432 34678888888884
Q ss_pred cCCCCcEEEecCC
Q 006454 488 SLNEKPIIFSLSN 500 (644)
Q Consensus 488 ~~~erPIIFaLSN 500 (644)
+..++.-.|.
T Consensus 224 ---~ga~lIn~ar 233 (313)
T 2ekl_A 224 ---DNVIIVNTSR 233 (313)
T ss_dssp ---TTEEEEESSC
T ss_pred ---CCCEEEECCC
Confidence 5668887776
No 67
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.93 E-value=0.28 Score=48.98 Aligned_cols=49 Identities=27% Similarity=0.355 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 368 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 368 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
-.|++.+|+..|..++..+++|+|||.+|.++|..|... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 467888888888899999999999998888888777642 4 468888874
No 68
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=90.93 E-value=0.27 Score=50.57 Aligned_cols=111 Identities=13% Similarity=0.123 Sum_probs=66.9
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC--Ccc--cCCCccCCchhhhhhccccCCCCCHHHH
Q 006454 385 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK--GLI--VSSRLESLQHFKKPWAHEHEPVKELVDA 459 (644)
Q Consensus 385 ~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~--GLi--~~~R~~~L~~~k~~fA~~~~~~~~L~ea 459 (644)
.||+|.|| |..|..++..|+. .|+-...-...++++|.+ ..- .++...+|.+.-.+|..+.....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 58999998 9999998887754 243111112479999975 100 0000001211101222221222578999
Q ss_pred HhccCCcEEEEccCCCCC--------------CCHHHHHHHHcCC-CCcEEEecCCCC
Q 006454 460 VNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLN-EKPIIFSLSNPT 502 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~-erPIIFaLSNPt 502 (644)
++. .|++|=+.+.+.. .++++++++.+++ .+.+|+=.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 987 8988866654432 2567889999986 787777789998
No 69
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.85 E-value=0.64 Score=48.45 Aligned_cols=96 Identities=20% Similarity=0.316 Sum_probs=60.1
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccc----cCCCCCHH
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE----HEPVKELV 457 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~----~~~~~~L~ 457 (644)
+...+++|+|+|..|..+|+.+.. .|. +++++|++- .+ +...+..+... .....++.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l~ 224 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANIK 224 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHHH
Confidence 778999999999999999888764 362 688888741 11 22221112110 11123577
Q ss_pred HHHhccCCcEEEEccCCCC-----CCCHHHHHHHHcCCCCcEEEecCCC
Q 006454 458 DAVNAIKPTILIGTSGQGR-----TFTKEVVEAMASLNEKPIIFSLSNP 501 (644)
Q Consensus 458 eaV~~vkPtvLIG~S~~~g-----~Fteevv~~Ma~~~erPIIFaLSNP 501 (644)
++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 225 ~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 225 KSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 88875 899999887553 46899999885 34566666643
No 70
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.78 E-value=0.28 Score=50.27 Aligned_cols=105 Identities=16% Similarity=0.260 Sum_probs=62.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCC-CCHHHHHhcc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV-KELVDAVNAI 463 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~-~~L~eaV~~v 463 (644)
.||.|+|||..|.++|-.+... |+ ...++++|.+--..+....++.+. .++....... .+..++++.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999766542 54 257999998521111000011111 1111100000 123456665
Q ss_pred CCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 464 KPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 464 kPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
.|+.|=+.+.+.. .-+++++.|.+++..-++|=.|||.
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv 126 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV 126 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch
Confidence 8988866555431 2357788888888887888889998
No 71
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.70 E-value=0.42 Score=49.13 Aligned_cols=101 Identities=18% Similarity=0.270 Sum_probs=64.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccc-cCCCCCHHHHHhcc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAI 463 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~eaV~~v 463 (644)
.||.|+|||..|.|+|..++.. |+ -..++|+|.+-= ..+...++.+ +... .....++ ++++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999998643 54 268999998631 1111111221 2111 1112466 66775
Q ss_pred CCcEEEEccCCC--CC-----------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 006454 464 KPTILIGTSGQG--RT-----------FTKEVVEAMASLNEKPIIFSLSNPTS 503 (644)
Q Consensus 464 kPtvLIG~S~~~--g~-----------Fteevv~~Ma~~~erPIIFaLSNPts 503 (644)
.|+.|=+.+.+ |- .-+++++.|.+++..-+|+=.|||..
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~ 129 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE 129 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH
Confidence 89988655443 10 13578888889999999888999983
No 72
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=90.67 E-value=1.3 Score=47.37 Aligned_cols=118 Identities=13% Similarity=0.134 Sum_probs=85.1
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 351 TTHLVFNDDI---QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 351 ~~~~~FNDDi---QGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
..+.+.|.-- +.+|=-+++.+|+..|..|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECC
Confidence 3455555432 3455568999999999999999999999999999999999998643 65 5888886
Q ss_pred CCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccC--------CCCCCCHHHHHHHHcCCCCcEEEecC
Q 006454 428 KGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG--------QGRTFTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 428 ~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~--------~~g~Fteevv~~Ma~~~erPIIFaLS 499 (644)
.. .. .. ......+|.|+++. .|+++=.-- ..+.|+++.++.|. +..|+.=.|
T Consensus 151 ~~------~~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~a 210 (381)
T 3oet_A 151 PR------AA-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINAC 210 (381)
T ss_dssp HH------HH-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECS
T ss_pred Ch------HH-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECC
Confidence 21 00 00 11234689999986 898874421 34689999999984 677888776
Q ss_pred C
Q 006454 500 N 500 (644)
Q Consensus 500 N 500 (644)
.
T Consensus 211 R 211 (381)
T 3oet_A 211 R 211 (381)
T ss_dssp C
T ss_pred C
Confidence 6
No 73
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.63 E-value=0.42 Score=47.61 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 368 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 368 LAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
-.|++.+|+..|.+++..+++|+|||.+|..+|..+... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~-----G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSL-----D-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHc-----C-------CEEEEEECC
Confidence 567788888888899999999999998888877777542 4 468888874
No 74
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.57 E-value=0.079 Score=54.04 Aligned_cols=123 Identities=20% Similarity=0.295 Sum_probs=67.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCC-CCCHHHHHhccC
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP-VKELVDAVNAIK 464 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~-~~~L~eaV~~vk 464 (644)
||.|+|||+.|.++|-.++. .|+ ...++|+|.+---..+...++.+.. +|.....- ..+. ++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~~-~a~~~-- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHGTRVWHGGH-SELAD-- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSCCEEEEECG-GGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCCeEEEECCH-HHhCC--
Confidence 89999999999999987754 254 2479999985210000000011100 11111000 0233 55665
Q ss_pred CcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeC
Q 006454 465 PTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASG 525 (644)
Q Consensus 465 PtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~GraifASG 525 (644)
.|++|=+.+.+.. .-+++++.|+++++.-+|+-.|||.. ...+.+.+.+.-.-+|.+|
T Consensus 68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~---~~~~~~~~~~~~~rviG~g 139 (304)
T 2v6b_A 68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVD---LLTDLATQLAPGQPVIGSG 139 (304)
T ss_dssp CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHH---HHHHHHHHHSCSSCEEECT
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchH---HHHHHHHHhCChhcEEeCC
Confidence 8988866544432 12788888988888878877999984 2233344444333455554
No 75
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=90.56 E-value=0.37 Score=47.45 Aligned_cols=81 Identities=23% Similarity=0.412 Sum_probs=54.5
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc
Q 006454 369 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 448 (644)
Q Consensus 369 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 448 (644)
.|++.+++..|.++++ +++|+|+|.+|..+|..+.. .|. +++++|++ .++ .......|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~----~~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT----PQR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----HHH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC----HHH---HHHHHHHhcc
Confidence 5888889988889999 99999999999999887754 242 58888874 111 1122222211
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC
Q 006454 449 EHEPVKELVDAVNAIKPTILIGTSGQG 475 (644)
Q Consensus 449 ~~~~~~~L~eaV~~vkPtvLIG~S~~~ 475 (644)
. ..++.++ + ++|++|-+...+
T Consensus 162 ~---~~~~~~~-~--~~Divi~~tp~~ 182 (263)
T 2d5c_A 162 R---AVPLEKA-R--EARLLVNATRVG 182 (263)
T ss_dssp E---ECCGGGG-G--GCSEEEECSSTT
T ss_pred c---hhhHhhc-c--CCCEEEEccCCC
Confidence 1 2456665 4 489998766644
No 76
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.56 E-value=1.8 Score=47.65 Aligned_cols=107 Identities=16% Similarity=0.214 Sum_probs=74.8
Q ss_pred HHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccc-cCCCC
Q 006454 376 KFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVK 454 (644)
Q Consensus 376 r~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~ 454 (644)
|..+..+.+.+++|+|+|..|.++|..+.. .|. +++.+|++- .+...|+. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka-----~Ga-------~Viv~d~~~------------~~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKG-----QGA-------RVSVTEIDP------------INALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCH------------HHHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH------------HHHHHHHHcCCEEe
Confidence 456678899999999999999999988764 252 688888741 11112221 11124
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHh
Q 006454 455 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAY 513 (644)
Q Consensus 455 ~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~ 513 (644)
++.|+++. .|++|-+++..++++++.++.|. +.-+|.-.+... .|+..+..+
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~ 373 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLE 373 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHH
Confidence 68888875 99999998888899989999884 556777777754 356555544
No 77
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=90.55 E-value=1.5 Score=48.68 Aligned_cols=179 Identities=20% Similarity=0.254 Sum_probs=116.6
Q ss_pred CchhhhHHHHHHHHHHHHH--hcCCCccceecccCCCCcHH--HHHHHHcC---CC------ceeecCC---------cc
Q 006454 305 AIGQEYAELLHEFMTAVKQ--NYGERILIQVFEDFANHNAF--DLLEKYGT---TH------LVFNDDI---------QG 362 (644)
Q Consensus 305 ~~g~eY~~fidefv~Av~~--~fGp~~lIq~fEDf~~~nAf--~lL~ryr~---~~------~~FNDDi---------QG 362 (644)
.+..|-..|...||..+.+ -.||..-|= =+|++..-.. -+.+.|+. .. |+-..-+ .-
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dip-ApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eA 214 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVP-APDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISA 214 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEEC-CBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEe-cCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCc
Confidence 4567888999999999985 678887777 7898764321 26677752 11 1212211 23
Q ss_pred hHHHHHHHHHH------HHHHhCC--CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCC
Q 006454 363 TASVVLAGLIS------AMKFLGG--SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS 434 (644)
Q Consensus 363 TaaVvLAgll~------Alr~~g~--~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~ 434 (644)
||-=+.-++-+ +++..|. .|++.||+|-|.|..|...|+.|.+ .|. +=+-+.|++|-|+..
T Consensus 215 Tg~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e-----~Ga------kVVavsDs~G~iyd~ 283 (501)
T 3mw9_A 215 TGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHR-----FGA------KCITVGESDGSIWNP 283 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHH-----TTC------EEEEEECSSCEEECT
T ss_pred hHHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHH-----CCC------EEEEEEcCCceEECC
Confidence 55444444443 3456675 4899999999999999999999875 363 446689999999976
Q ss_pred CccCCchhhh-hhccccC------CCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 006454 435 RLESLQHFKK-PWAHEHE------PVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 502 (644)
Q Consensus 435 R~~~L~~~k~-~fA~~~~------~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 502 (644)
. .++..+. .+..... ....+.+.+-.++.||||=+..+ +..|++-++.+ .-.||.--+| |+
T Consensus 284 ~--Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 284 D--GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp T--CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred C--CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 4 3433221 1111110 00001112445789999988876 69999988876 5789999998 54
No 78
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=90.37 E-value=1.3 Score=45.74 Aligned_cols=111 Identities=13% Similarity=0.179 Sum_probs=69.9
Q ss_pred HHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccc-
Q 006454 371 LISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE- 449 (644)
Q Consensus 371 ll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~- 449 (644)
.+++-.+..+ ...++.|+|+|..|-.+++.+... .++ ++|+++|+. + ...+...+...
T Consensus 110 ~laa~~La~~--~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~---a~~la~~l~~~~ 168 (313)
T 3hdj_A 110 VLAAGALARP--RSSVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------A---SPEILERIGRRC 168 (313)
T ss_dssp HHHHHHHSCT--TCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------C---CHHHHHHHHHHH
T ss_pred HHHHHhhccC--CCcEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------H---HHHHHHHHHHhc
Confidence 3444444333 457999999999998888776543 233 789999996 2 12233333211
Q ss_pred ---cCCCCCHHHHHhccCCcEEEEccCCC-CCCCHHHHHHHHcCCCCcEEEecCC--CCCCCCCCHHHH
Q 006454 450 ---HEPVKELVDAVNAIKPTILIGTSGQG-RTFTKEVVEAMASLNEKPIIFSLSN--PTSQSECTAEEA 512 (644)
Q Consensus 450 ---~~~~~~L~eaV~~vkPtvLIG~S~~~-g~Fteevv~~Ma~~~erPIIFaLSN--Pts~aEct~edA 512 (644)
.... ++.|+++. .|++|-+.... ..|..+.+ .+..+|..++. |. +-|+.++-.
T Consensus 169 g~~~~~~-~~~eav~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 169 GVPARMA-APADIAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp TSCEEEC-CHHHHHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred CCeEEEe-CHHHHHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCCCCCc-hhhcCHHHH
Confidence 1223 89999987 99999765543 24444332 36678888875 43 578888754
No 79
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=90.18 E-value=0.9 Score=46.30 Aligned_cols=114 Identities=14% Similarity=0.178 Sum_probs=64.2
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc
Q 006454 369 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 448 (644)
Q Consensus 369 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 448 (644)
++.+++.... +....+|.|+|+|..|..++..+... .|+ ++++++|+. .+ ..+.+...+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~---~~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KE---NAEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HH---HHHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HH---HHHHHHHHhhC
Confidence 3445553332 45667999999999999998887653 243 578888873 11 12222222210
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC--CCCCCCCCH
Q 006454 449 EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN--PTSQSECTA 509 (644)
Q Consensus 449 ~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN--Pts~aEct~ 509 (644)
......++.|+++. +|++|=+... +++++.. ....+.-+|+.+|. |. .-|+.+
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~----~~~v~~~-~~l~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLA----TEPILFG-EWVKPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCC----SSCCBCG-GGSCTTCEEEECCCCSTT-CCSBCH
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCC----CCcccCH-HHcCCCcEEEeCCCCCCC-ceeccH
Confidence 01124689999986 8988854332 1233321 12234567887743 43 355543
No 80
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=90.13 E-value=0.53 Score=49.27 Aligned_cols=114 Identities=12% Similarity=0.178 Sum_probs=68.4
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc
Q 006454 369 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 448 (644)
Q Consensus 369 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 448 (644)
+|.+++.... +....++.|+|+|..|..++..+... .++ ++++++|+. .+ ....+...|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~---~a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PL---ATAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HH---HHHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HH---HHHHHHHHHHh
Confidence 4556665553 24568999999999999988776543 233 679988873 22 23333333321
Q ss_pred c----cCCCCCHHHHHhccCCcEEEEccCCC---CCCCHHHHHHHHcCCCCcEEEecCC--CCCCCCCCHH
Q 006454 449 E----HEPVKELVDAVNAIKPTILIGTSGQG---RTFTKEVVEAMASLNEKPIIFSLSN--PTSQSECTAE 510 (644)
Q Consensus 449 ~----~~~~~~L~eaV~~vkPtvLIG~S~~~---g~Fteevv~~Ma~~~erPIIFaLSN--Pts~aEct~e 510 (644)
. .....++.|+++. .|++|=++..+ ..|..+.+ .+.-.|+.++. |. +-|+.++
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l------~~G~~V~~vgs~~p~-~~El~~~ 238 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDML------EPGMHLNAVGGDCPG-KTELHAD 238 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGC------CTTCEEEECSCCBTT-BEEECHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHc------CCCCEEEECCCCCCC-ceeeCHH
Confidence 1 1124689999986 89998766543 12333222 23447777765 55 5676654
No 81
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.09 E-value=0.37 Score=47.92 Aligned_cols=37 Identities=30% Similarity=0.409 Sum_probs=32.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 45678999999999999999998764 76 789999987
No 82
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.97 E-value=0.22 Score=51.43 Aligned_cols=128 Identities=15% Similarity=0.226 Sum_probs=71.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcccc--CCCCCHHHHHhc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVNA 462 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~eaV~~ 462 (644)
.||.|+|||+.|.++|.+++. .|+ -+++|+|.+-=..+.-...+.+...++.... ....++ ++++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~------~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDL------GDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC
Confidence 589999999999999988764 254 1399999852101000001111111111110 011456 77775
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccc--CCcEEEeeCC
Q 006454 463 IKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS--QGRAIFASGS 526 (644)
Q Consensus 463 vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT--~GraifASGS 526 (644)
.|++|=+.+.+ |. .-+++.+.+.++++.-+|+=-|||.+- ..+-+.+.+ .-.-+|++|.
T Consensus 83 --aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~---~t~~~~~~~~~~~~rviG~~t 157 (328)
T 2hjr_A 83 --SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDA---MVYYFKEKSGIPANKVCGMSG 157 (328)
T ss_dssp --CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---HHHHHHHHHCCCGGGEEESCH
T ss_pred --CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHH---HHHHHHHhcCCChhhEEEeCc
Confidence 89888554333 21 245778888888888777667999843 233333332 2234556665
Q ss_pred CCC
Q 006454 527 PFD 529 (644)
Q Consensus 527 PF~ 529 (644)
+.+
T Consensus 158 ~Ld 160 (328)
T 2hjr_A 158 VLD 160 (328)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 83
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.87 E-value=0.48 Score=48.48 Aligned_cols=99 Identities=14% Similarity=0.299 Sum_probs=61.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhh------hccccC-CCCCHHH
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP------WAHEHE-PVKELVD 458 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~------fA~~~~-~~~~L~e 458 (644)
||.|+|||..|.++|..++.. |. ...++++|.+- ++ +...... +..... ...+ .+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~i~~~d-~~ 63 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KR---AEGDALDLIHGTPFTRRANIYAGD-YA 63 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HH---HHHHHHHHHHHGGGSCCCEEEECC-GG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HH---HHHHHHHHHhhhhhcCCcEEEeCC-HH
Confidence 799999999999999887653 54 24799999851 11 1111111 110000 0123 34
Q ss_pred HHhccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCCC
Q 006454 459 AVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQ 504 (644)
Q Consensus 459 aV~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPts~ 504 (644)
+++. .|++|=+-..+.. .-+++++.|.+++..-+|+-.|||...
T Consensus 64 ~~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 64 DLKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDV 121 (319)
T ss_dssp GGTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHH
T ss_pred HhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHH
Confidence 5554 8888755544431 126888899888887788889999843
No 84
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=89.68 E-value=0.29 Score=53.79 Aligned_cols=124 Identities=15% Similarity=0.182 Sum_probs=74.6
Q ss_pred CceEEEeCcChHH--HHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc-cc-cC-C---CCC
Q 006454 384 DQRFLFLGAGEAG--TGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-HE-HE-P---VKE 455 (644)
Q Consensus 384 d~riv~~GAGsAG--~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-~~-~~-~---~~~ 455 (644)
..||.|+|||+.| .++|..|+.. .++ +-..++|+|.+- ++-+........+. +. .+ . ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 4689999999964 4456666531 122 236799999852 21111111111221 10 11 1 257
Q ss_pred HHHHHhccCCcEEEEccCCC---------------CCCC-------------------------HHHHHHHHcCCCCcEE
Q 006454 456 LVDAVNAIKPTILIGTSGQG---------------RTFT-------------------------KEVVEAMASLNEKPII 495 (644)
Q Consensus 456 L~eaV~~vkPtvLIG~S~~~---------------g~Ft-------------------------eevv~~Ma~~~erPII 495 (644)
+.++++. .|++|=+.+++ |.|. +++++.|.++|..-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8899986 89888655431 3333 6899999999999999
Q ss_pred EecCCCCCCCCCCHHHHhcccCCcEEEeeC
Q 006454 496 FSLSNPTSQSECTAEEAYTWSQGRAIFASG 525 (644)
Q Consensus 496 FaLSNPts~aEct~edA~~wT~GraifASG 525 (644)
+=.|||. . +..+-+.++..- -+|.+|
T Consensus 149 i~~TNPv--d-i~t~~~~k~p~~-rviG~c 174 (480)
T 1obb_A 149 LQAANPI--F-EGTTLVTRTVPI-KAVGFC 174 (480)
T ss_dssp EECSSCH--H-HHHHHHHHHSCS-EEEEEC
T ss_pred EEeCCcH--H-HHHHHHHHCCCC-cEEecC
Confidence 9999998 2 333444555444 455554
No 85
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=89.65 E-value=0.22 Score=50.85 Aligned_cols=103 Identities=18% Similarity=0.271 Sum_probs=63.5
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc--CCcccCCCccCCchhhhhhccccCC-CCCHHHHHh
Q 006454 386 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KGLIVSSRLESLQHFKKPWAHEHEP-VKELVDAVN 461 (644)
Q Consensus 386 riv~~G-AGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs--~GLi~~~R~~~L~~~k~~fA~~~~~-~~~L~eaV~ 461 (644)
||+|.| ||..|..++..|+. .|+ ...++|+|. +-=-.++-..+|.+... +.++..- ..+ .++++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~-~~a~~ 69 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGG-YEDTA 69 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECC-GGGGT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCC-HHHhC
Confidence 899999 99999998887754 244 256999997 31000000001222111 1111000 022 45666
Q ss_pred ccCCcEEEEccCCCC---C-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 462 AIKPTILIGTSGQGR---T-----------FTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 462 ~vkPtvLIG~S~~~g---~-----------Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
. .|++|=+.+.+. . .+++++++|.+++.+.+|+--|||.
T Consensus 70 ~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv 122 (303)
T 1o6z_A 70 G--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 5 899886666553 2 4677889999999999999999997
No 86
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.62 E-value=0.63 Score=41.92 Aligned_cols=37 Identities=22% Similarity=0.389 Sum_probs=28.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+.+...+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 44566899999999999999988864 25 368899875
No 87
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.47 E-value=0.31 Score=50.34 Aligned_cols=102 Identities=18% Similarity=0.229 Sum_probs=63.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCcc----CCchhhhhhcccc--CCCCCHHH
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEH--EPVKELVD 458 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~--~~~~~L~e 458 (644)
.||.|+|||+.|.++|.+++. .|+- +++|+|.+ .++-+ .+.+...+..... ....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~-----~g~~------~v~L~Di~----~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQ-----KNLG------DVVLFDIV----KNMPHGKALDTSHTNVMAYSNCKVSGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSS----SSHHHHHHHHHHTHHHHHTCCCCEEEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCC----HHHHHHHHHHHHhhhhhcCCCcEEEECCCH-H
Confidence 489999999999999988875 2651 39999975 22211 1111111111110 011456 7
Q ss_pred HHhccCCcEEEEccCCC---CC----------------CCHHHHHHHHcCCCCcEEEecCCCCCC
Q 006454 459 AVNAIKPTILIGTSGQG---RT----------------FTKEVVEAMASLNEKPIIFSLSNPTSQ 504 (644)
Q Consensus 459 aV~~vkPtvLIG~S~~~---g~----------------Fteevv~~Ma~~~erPIIFaLSNPts~ 504 (644)
+++. .|++|=+.+.+ |. .-+++.+.|.++++.-+|+=.|||...
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~ 131 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDV 131 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHH
Confidence 7776 89888664333 21 356788888888988887767999843
No 88
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.36 E-value=0.36 Score=50.91 Aligned_cols=37 Identities=27% Similarity=0.453 Sum_probs=33.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+|++.||+++|||..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCC
Confidence 46789999999999999999999875 76 789999996
No 89
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=89.07 E-value=4.5 Score=41.69 Aligned_cols=93 Identities=16% Similarity=0.214 Sum_probs=61.0
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHH
Q 006454 379 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 458 (644)
Q Consensus 379 g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 458 (644)
|..|.+.+|.|+|.|..|..+|..+.. .|. +++.+|+.. .. ... ..+ .-...+|.|
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~----~~~-~~~---g~~~~~l~~ 200 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKG-----FNM-------RILYYSRTR----KE----EVE-REL---NAEFKPLED 200 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----CH----HHH-HHH---CCEECCHHH
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHh-----CCC-------EEEEECCCc----ch----hhH-hhc---CcccCCHHH
Confidence 457889999999999999999998864 253 688888741 11 011 111 011247889
Q ss_pred HHhccCCcEEEEcc-CC---CCCCCHHHHHHHHcCCCCcEEEecCC
Q 006454 459 AVNAIKPTILIGTS-GQ---GRTFTKEVVEAMASLNEKPIIFSLSN 500 (644)
Q Consensus 459 aV~~vkPtvLIG~S-~~---~g~Fteevv~~Ma~~~erPIIFaLSN 500 (644)
+++. .|+++=.- .. .+.+++++++.|. +..+|.-.|.
T Consensus 201 ~l~~--aDvVil~vp~~~~t~~~i~~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 201 LLRE--SDFVVLAVPLTRETYHLINEERLKLMK---KTAILINIAR 241 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTCEEEECSC
T ss_pred HHhh--CCEEEECCCCChHHHHhhCHHHHhcCC---CCcEEEECCC
Confidence 8886 88877432 21 2567788888774 5567776663
No 90
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=89.07 E-value=2.9 Score=43.04 Aligned_cols=122 Identities=15% Similarity=0.202 Sum_probs=77.5
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHHh---------------------CCCCCCceEEEeCcChHHHHHHHHHHHH
Q 006454 351 TTHLVFNDDI---QGTASVVLAGLISAMKFL---------------------GGSLADQRFLFLGAGEAGTGIAELIALE 406 (644)
Q Consensus 351 ~~~~~FNDDi---QGTaaVvLAgll~Alr~~---------------------g~~L~d~riv~~GAGsAG~GIA~ll~~~ 406 (644)
..+.+.|--- +.+|=-+++.+|+..|-. |..|.+.+|.|+|.|..|..+|+.+..
T Consensus 98 ~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~- 176 (330)
T 2gcg_A 98 RGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKP- 176 (330)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGG-
T ss_pred CCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 4677777543 234444788888887622 356889999999999999999998753
Q ss_pred HHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHH
Q 006454 407 ISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEV 482 (644)
Q Consensus 407 m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteev 482 (644)
.|+ +++.+|+.. .+ ....+ .+ .-...+|.|+++. .|+++=.-. ..+.+++++
T Consensus 177 ----~G~-------~V~~~d~~~----~~---~~~~~-~~---g~~~~~l~e~l~~--aDvVi~~vp~~~~t~~~i~~~~ 232 (330)
T 2gcg_A 177 ----FGV-------QRFLYTGRQ----PR---PEEAA-EF---QAEFVSTPELAAQ--SDFIVVACSLTPATEGLCNKDF 232 (330)
T ss_dssp ----GTC-------CEEEEESSS----CC---HHHHH-TT---TCEECCHHHHHHH--CSEEEECCCCCTTTTTCBSHHH
T ss_pred ----CCC-------EEEEECCCC----cc---hhHHH-hc---CceeCCHHHHHhh--CCEEEEeCCCChHHHHhhCHHH
Confidence 264 588888641 11 11111 11 0011278888886 898874432 235677888
Q ss_pred HHHHHcCCCCcEEEecCC
Q 006454 483 VEAMASLNEKPIIFSLSN 500 (644)
Q Consensus 483 v~~Ma~~~erPIIFaLSN 500 (644)
++.|. +..++.-.|.
T Consensus 233 ~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 233 FQKMK---ETAVFINISR 247 (330)
T ss_dssp HHHSC---TTCEEEECSC
T ss_pred HhcCC---CCcEEEECCC
Confidence 88773 4556665554
No 91
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.87 E-value=1.9 Score=41.59 Aligned_cols=93 Identities=12% Similarity=0.216 Sum_probs=61.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhcc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 463 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 463 (644)
..||.|+|+|..|..+|..+... |.. ...+++++|+. .++ + ......++.|+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~----------~--g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN----------T--TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS----------S--SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc----------C--ceEEeCCHHHHHhc-
Confidence 45899999999999999988653 420 01368888874 111 0 00112467788875
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCC
Q 006454 464 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQ 504 (644)
Q Consensus 464 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~ 504 (644)
+|++| ++..+ ...+++++.+....+..+|+.++|..+.
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLNI 96 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCCH
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCCH
Confidence 88776 33333 4578888888765566678888887753
No 92
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.86 E-value=0.48 Score=48.67 Aligned_cols=107 Identities=14% Similarity=0.252 Sum_probs=65.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc-cccCCCCCHHHHHh
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-HEHEPVKELVDAVN 461 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~eaV~ 461 (644)
...||.|+|||..|..+|-.|+.. |+ -..++|+|.+-=..++....|.+. .+|. ++..-..+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 456999999999999988876542 54 267999997510000100112222 2332 11000013356677
Q ss_pred ccCCcEEEEccCCCCCC--------------CHHHHHHHHcCCCCcEEEecCCCC
Q 006454 462 AIKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 462 ~vkPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLSNPt 502 (644)
. .|++|=+.+.+..- =+++++.|.+++..-+|+=.|||.
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV 126 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 5 89988666555321 246777788889999999999998
No 93
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=88.84 E-value=0.29 Score=50.73 Aligned_cols=106 Identities=17% Similarity=0.263 Sum_probs=63.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhcc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 463 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 463 (644)
..||.|+|||+.|..+|-+|+.. ++ -..++|+|.+-=-.++-..+|.+.. +|.++..-..+-.++++.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHHH-HhcCCeEEEECCHHHhCC-
Confidence 36999999999999988877542 44 2689999984100000000122211 222110000123566776
Q ss_pred CCcEEEEccCCCCCC--------------CHHHHHHHHcCCCCcEEEecCCCC
Q 006454 464 KPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 464 kPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLSNPt 502 (644)
.|+.|=+.+.+..- -+++++.|.+++..-+|+=.|||.
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 128 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 89998666555321 245677778889999999999998
No 94
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=88.77 E-value=0.75 Score=45.90 Aligned_cols=84 Identities=19% Similarity=0.371 Sum_probs=56.4
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc
Q 006454 369 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 448 (644)
Q Consensus 369 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 448 (644)
.|++.+++..|..++..+++|+|+|.+|..+|..+... |. +++++|+. .++ .......+.
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~----~~~---~~~l~~~~g- 173 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT----KEK---AIKLAQKFP- 173 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS----HHH---HHHHTTTSC-
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC----HHH---HHHHHHHcC-
Confidence 48888888888899999999999999999998888653 42 68888874 111 111111110
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC
Q 006454 449 EHEPVKELVDAVNAIKPTILIGTSGQG 475 (644)
Q Consensus 449 ~~~~~~~L~eaV~~vkPtvLIG~S~~~ 475 (644)
.....++.++++. +|++|-+...+
T Consensus 174 -~~~~~~~~~~~~~--aDiVi~atp~~ 197 (275)
T 2hk9_A 174 -LEVVNSPEEVIDK--VQVIVNTTSVG 197 (275)
T ss_dssp -EEECSCGGGTGGG--CSEEEECSSTT
T ss_pred -CeeehhHHhhhcC--CCEEEEeCCCC
Confidence 0011256677764 89999776644
No 95
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=88.58 E-value=0.3 Score=53.04 Aligned_cols=127 Identities=14% Similarity=0.261 Sum_probs=76.9
Q ss_pred ceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc--ccC-C---CCCHH
Q 006454 385 QRFLFLGAGEA-GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH--EHE-P---VKELV 457 (644)
Q Consensus 385 ~riv~~GAGsA-G~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~--~~~-~---~~~L~ 457 (644)
.||.|+|||+. |.+++..|+.. ..++. -..++|+|.+-- ++|.+.+......+.. ..+ . ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 58999999997 55655555431 12442 367999998520 0211111111122211 111 1 25788
Q ss_pred HHHhccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 006454 458 DAVNAIKPTILIGTSGQGRT----------------------------------FTKEVVEAMASLNEKPIIFSLSNPTS 503 (644)
Q Consensus 458 eaV~~vkPtvLIG~S~~~g~----------------------------------Fteevv~~Ma~~~erPIIFaLSNPts 503 (644)
|+++. .|++|=+.++++. .-+++++.|.++|..-+|+=.|||..
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvd 156 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAG 156 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHH
Confidence 99997 9999877665431 13588899999999999999999982
Q ss_pred CCCCCHHHHhcccCCcEEEeeC
Q 006454 504 QSECTAEEAYTWSQGRAIFASG 525 (644)
Q Consensus 504 ~aEct~edA~~wT~GraifASG 525 (644)
+..+-+++.+.-.-+|.+|
T Consensus 157 ---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 157 ---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp ---HHHHHHHHHCCCCCEEECC
T ss_pred ---HHHHHHHHhCCCCCEEEeC
Confidence 2334445556332566654
No 96
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=88.54 E-value=1.5 Score=45.90 Aligned_cols=38 Identities=24% Similarity=0.534 Sum_probs=33.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+|++.||+++|+|..|.-+|..|+.+ |+ ++|.++|.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCC
Confidence 346789999999999999999999875 76 789999986
No 97
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=88.35 E-value=1.6 Score=44.81 Aligned_cols=112 Identities=19% Similarity=0.205 Sum_probs=67.0
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc
Q 006454 369 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 448 (644)
Q Consensus 369 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 448 (644)
++.+++..+.. ....++.|+|+|..|-.+++.+... .++ ++++++|+. .++ .+.+...|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HHH---HHHHHHHHHh
Confidence 34555555432 3567999999999998888877643 233 678988873 222 3333333321
Q ss_pred ---ccCCCCCHHHHHhccCCcEEEEccCCCC-CCCHHHHHHHHcCCCCcEEEecC--CCCCCCCCCHH
Q 006454 449 ---EHEPVKELVDAVNAIKPTILIGTSGQGR-TFTKEVVEAMASLNEKPIIFSLS--NPTSQSECTAE 510 (644)
Q Consensus 449 ---~~~~~~~L~eaV~~vkPtvLIG~S~~~g-~Fteevv~~Ma~~~erPIIFaLS--NPts~aEct~e 510 (644)
+.. ..++.|++ . .|++|=++..+- .|..+. ..+.-.|+.++ +|. +.|+.++
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~------l~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEW------VEEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGG------CCTTCEEEECSCCSTT-CCCBCHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHH------cCCCeEEEECCCCCCC-ccccCHH
Confidence 112 46898988 4 899986655431 233222 23455788883 454 5777664
No 98
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.34 E-value=0.36 Score=49.79 Aligned_cols=105 Identities=14% Similarity=0.229 Sum_probs=62.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 464 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 464 (644)
.||.|+|||+.|..+|-+|+.. ++ -..++|+|.+-=-.++-..+|.+.. +|.++..-..+..++++.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGGG-GGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHHH-HhcCCeEEEECCHHHhCC--
Confidence 6999999999999988876543 44 2689999984100000000122211 232210000123566775
Q ss_pred CcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 465 PTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 465 PtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
.|+.|=+.+.+.. .-+++++.|.+++..-+|+=.|||.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 124 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV 124 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH
Confidence 8998866555432 1245777788899999999999998
No 99
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=88.26 E-value=0.86 Score=46.93 Aligned_cols=104 Identities=21% Similarity=0.299 Sum_probs=65.0
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhh-ccccCCCCCHHHHHhc
Q 006454 385 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-AHEHEPVKELVDAVNA 462 (644)
Q Consensus 385 ~riv~~G-AGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f-A~~~~~~~~L~eaV~~ 462 (644)
.||+|+| +|..|..++..|+. .|+ ...++++|.+.- .+...+|.+...+. .+......++.++++.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999998887653 353 256999996421 00000011100000 0000011257888886
Q ss_pred cCCcEEEEccCCCC--------------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 463 IKPTILIGTSGQGR--------------TFTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 463 vkPtvLIG~S~~~g--------------~Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
.|++|=+.+.+. ..+++++++|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 899886665443 23677888888889888999999998
No 100
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=88.23 E-value=0.85 Score=46.46 Aligned_cols=100 Identities=22% Similarity=0.298 Sum_probs=60.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCC----chhhhhhcccc--CCCCCHHHH
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL----QHFKKPWAHEH--EPVKELVDA 459 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L----~~~k~~fA~~~--~~~~~L~ea 459 (644)
||.|+|||..|.++|..++.. ++ -..++++|.+- ++-+.+ .+....+.... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 799999999999999887642 22 25799999852 211111 11100010000 01134544
Q ss_pred HhccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 460 VNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
++. .|++|=+.+.+ |- .-+++++.|++++..-+|+-.|||-
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 654 88887554433 21 1157778888888888888899997
No 101
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=88.18 E-value=0.43 Score=52.22 Aligned_cols=126 Identities=15% Similarity=0.229 Sum_probs=76.8
Q ss_pred CceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc-cccCC-----CCCH
Q 006454 384 DQRFLFLGAGEA-GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-HEHEP-----VKEL 456 (644)
Q Consensus 384 d~riv~~GAGsA-G~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-~~~~~-----~~~L 456 (644)
..||.|+|||+. +.++|..|+.. ..++. -..++|+|.+- ++.+.+......+. .-..+ ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55567666531 01442 36799999852 22111111112221 10111 2578
Q ss_pred HHHHhccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 457 VDAVNAIKPTILIGTSGQGRT----------------------------------FTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 457 ~eaV~~vkPtvLIG~S~~~g~----------------------------------Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
.++++. .|++|=+.+.++. .=+++++.|.++|..-+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 899986 9998866655321 1358889999999999999999998
Q ss_pred CCCCCCHHHHhcccCCcEEEeeC
Q 006454 503 SQSECTAEEAYTWSQGRAIFASG 525 (644)
Q Consensus 503 s~aEct~edA~~wT~GraifASG 525 (644)
. +..+-+++.+.-.-+|.+|
T Consensus 175 d---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 A---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 2 3334445555333566554
No 102
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.89 E-value=0.64 Score=48.80 Aligned_cols=95 Identities=17% Similarity=0.275 Sum_probs=61.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccc----cCCCCCH
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE----HEPVKEL 456 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~----~~~~~~L 456 (644)
.+...+++|+|+|..|..+|+.+.. .|. +++.+|+. .. .++..+..+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~-----~Ga-------~V~~~d~~----~~---~l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANG-----MGA-------TVTVLDIN----ID---KLRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESC----HH---HHHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCC----HH---HHHHHHHhcCCeeEeccCCHHHH
Confidence 4778999999999999999988764 253 58888874 11 122222212111 0012357
Q ss_pred HHHHhccCCcEEEEccCCCC-----CCCHHHHHHHHcCCCCcEEEecC
Q 006454 457 VDAVNAIKPTILIGTSGQGR-----TFTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 457 ~eaV~~vkPtvLIG~S~~~g-----~Fteevv~~Ma~~~erPIIFaLS 499 (644)
.+.++. .|++|.+.+.++ .++++.++.|. +.-+|.=+|
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va 268 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIA 268 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEe
Confidence 788875 899998776553 56888888884 344666555
No 103
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=87.76 E-value=1.2 Score=48.54 Aligned_cols=102 Identities=13% Similarity=0.162 Sum_probs=63.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHH
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 459 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~ea 459 (644)
.++..+|.|+|+|..|..+|..|... |. +++++|+. . +..+.....+.. ......++.|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~----~---~~~~~l~~~~~~~gi~~~~s~~e~ 72 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRS----R---EKTEEVIAENPGKKLVPYYTVKEF 72 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS----H---HHHHHHHHHSTTSCEEECSSHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCC----H---HHHHHHHhhCCCCCeEEeCCHHHH
Confidence 35678999999999999999998742 53 57778763 1 112222211100 01123578898
Q ss_pred Hhcc-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 006454 460 VNAI-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 502 (644)
Q Consensus 460 V~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 502 (644)
++.. +||++| ++-..+..++++++.+...- +.-||.-+||-.
T Consensus 73 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 73 VESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 8754 478777 44444456888998887544 356888888865
No 104
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=87.76 E-value=0.39 Score=46.85 Aligned_cols=98 Identities=15% Similarity=0.265 Sum_probs=60.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHH
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 460 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 460 (644)
++...||.|+|+|..|..+|..+... |. +.++++|++ . +.++.....+ ......++.|++
T Consensus 7 ~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~~ 66 (266)
T 3d1l_A 7 SIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRT----E---ESARELAQKV--EAEYTTDLAEVN 66 (266)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSS----H---HHHHHHHHHT--TCEEESCGGGSC
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCC----H---HHHHHHHHHc--CCceeCCHHHHh
Confidence 45557899999999999999988653 53 247888863 1 1122222111 001124566666
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 006454 461 NAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 502 (644)
Q Consensus 461 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 502 (644)
+ ++|++|=+.. ... .+++++.+.... +..+|.-+||-.
T Consensus 67 ~--~~Dvvi~av~-~~~-~~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 67 P--YAKLYIVSLK-DSA-FAELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp S--CCSEEEECCC-HHH-HHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred c--CCCEEEEecC-HHH-HHHHHHHHHhhcCCCcEEEECCCCC
Confidence 5 4888874333 323 388888887644 567888888854
No 105
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=87.44 E-value=0.48 Score=48.72 Aligned_cols=98 Identities=21% Similarity=0.299 Sum_probs=61.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc------ccC-CCCCHH
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH------EHE-PVKELV 457 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~------~~~-~~~~L~ 457 (644)
.||.|+|||..|..+|-+|+. .|+ -..++|+|.+ .++ ++.....+.+ +.. ...+ .
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~----~~~---~~g~~~dl~~~~~~~~~~~i~~~~-~ 69 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVF----KEK---AIGEAMDINHGLPFMGQMSLYAGD-Y 69 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC----------CCHHHHHHTTSCCCTTCEEEC--C-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCC----hHH---HHHHHHHHHHhHHhcCCeEEEECC-H
Confidence 589999999999998887654 254 2589999985 222 1111111111 100 0123 4
Q ss_pred HHHhccCCcEEEEccCCCCCC--------------CHHHHHHHHcCCCCcEEEecCCCC
Q 006454 458 DAVNAIKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 458 eaV~~vkPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLSNPt 502 (644)
++++. .|+.|=+.+.+..- -+++++.|.+++..-+|+=.|||.
T Consensus 70 ~a~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (318)
T 1y6j_A 70 SDVKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV 126 (318)
T ss_dssp GGGTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH
T ss_pred HHhCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 56665 89988665554321 168889999989999999999997
No 106
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=87.37 E-value=3.6 Score=43.20 Aligned_cols=192 Identities=16% Similarity=0.132 Sum_probs=109.9
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHHh---------------------CCCCCCceEEEeCcChHHHHHHHHHHHH
Q 006454 351 TTHLVFNDDI---QGTASVVLAGLISAMKFL---------------------GGSLADQRFLFLGAGEAGTGIAELIALE 406 (644)
Q Consensus 351 ~~~~~FNDDi---QGTaaVvLAgll~Alr~~---------------------g~~L~d~riv~~GAGsAG~GIA~ll~~~ 406 (644)
..+++.|--- +.+|=-+++-+|+..|-. |..|.+.++.|+|.|..|..+|+.+..
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~- 194 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARG- 194 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHT-
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHH-
Confidence 3455555432 245556788888877632 567889999999999999999999864
Q ss_pred HHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHH
Q 006454 407 ISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEV 482 (644)
Q Consensus 407 m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteev 482 (644)
.|+ +++.+|+... .... +.......+|.|+++. .|+++=.-- .-+.|+++.
T Consensus 195 ----~G~-------~V~~~dr~~~---------~~~~---~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 195 ----FGL-------AIHYHNRTRL---------SHAL---EEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp ----TTC-------EEEEECSSCC---------CHHH---HTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred ----CCC-------EEEEECCCCc---------chhh---hcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 254 5888887521 0100 1111112589999986 898884432 236899999
Q ss_pred HHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCC-CCCcccCCeeecccCCCccccchhhhHHHHHhCC
Q 006454 483 VEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSP-FDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGA 561 (644)
Q Consensus 483 v~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~GraifASGSP-F~pV~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a 561 (644)
++.|. +..|+.=.|.-.---|-.-.+|+ .+|+.-.| |-. |++ |- .....-=+..|+.+-|=+|-...-
T Consensus 250 l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~gA-~LDVf~~-EP-~~~~pL~~~~nvilTPHia~~t~e--- 318 (345)
T 4g2n_A 250 IAKIP---EGAVVINISRGDLINDDALIEAL--RSKHLFAA-GLDVFAN-EP-AIDPRYRSLDNIFLTPHIGSATHE--- 318 (345)
T ss_dssp HHHSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEE-EESCCTT-TT-SCCTTGGGCTTEEECCSCTTCBHH---
T ss_pred HhhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCceEE-EecCCCC-CC-CCCchHHhCCCEEEcCccCcCCHH---
Confidence 99994 66788777753322222222333 34654322 211 110 00 000011234588888876632111
Q ss_pred cccCHHHHHHHHHHHHcccC
Q 006454 562 IRVHDDMLLAAAEALAGQVT 581 (644)
Q Consensus 562 ~~Itd~M~laAA~aLA~~v~ 581 (644)
-.+.|...+++-|.....
T Consensus 319 --~~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 319 --TRDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp --HHHHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHHHHHc
Confidence 124566666666666554
No 107
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=87.23 E-value=0.53 Score=47.24 Aligned_cols=49 Identities=24% Similarity=0.264 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 367 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 367 vLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
...|++.+++..+.++++.+++|+|||.+|.++|..++. .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 678999999988889999999999998666666665542 12 68888874
No 108
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=87.13 E-value=0.41 Score=41.19 Aligned_cols=103 Identities=14% Similarity=0.189 Sum_probs=52.1
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHH-
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA- 459 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~ea- 459 (644)
++..+|+|+|+|..|..+|+.+.. .| .+++++|++. .+.+.+......+.. +......|.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g-------~~v~~~d~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MG-------HEVLAVDINE----EKVNAYASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TT-------CCCEEEESCH----HHHHTTTTTCSEEEECCTTCHHHHHTTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HHHHHHHHhCCEEEEeCCCCHHHHHhcC
Confidence 455789999999999999888764 25 2578888742 111111111001111 11111122222
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 460 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
++ ++|++|=+.+..-..+..+++...+.+...||...+||.
T Consensus 68 ~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 68 IR--NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp GG--GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred CC--CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 22 589998665532011233444444455556666666665
No 109
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=87.05 E-value=0.67 Score=44.49 Aligned_cols=93 Identities=14% Similarity=0.188 Sum_probs=57.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEE-EccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhcc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWL-VDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 463 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~l-vDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 463 (644)
.||.|+|+|..|..+|..+... |. ++++ +|++ .+.++...+.+-- ....+..|+++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~-------~~~~~~l~~~~g~--~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG-------PASLSSVTDRFGA--SVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC-------GGGGHHHHHHHTT--TEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC-------HHHHHHHHHHhCC--CcccChHHHHhc-
Confidence 5899999999999999988652 53 3555 5552 1223332222210 111244566764
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 006454 464 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 503 (644)
Q Consensus 464 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts 503 (644)
+|++| ++..+ ...+++++.++. .+..+|+.++||..
T Consensus 82 -aDvVi-lavp~-~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVPY-DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESCG-GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCCh-HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 78877 33332 456777777765 45669999999984
No 110
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=87.00 E-value=3.5 Score=42.83 Aligned_cols=107 Identities=15% Similarity=0.269 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE
Q 006454 363 TASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW 423 (644)
Q Consensus 363 TaaVvLAgll~Alr~-------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~ 423 (644)
+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++
T Consensus 124 vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~ 191 (333)
T 3ba1_A 124 VADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEA-----FDC-------PIS 191 (333)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEE
Confidence 344467777776553 2467889999999999999999998864 254 588
Q ss_pred EEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHHHHHcCCCCcEEEecC
Q 006454 424 LVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 424 lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLS 499 (644)
.+|+.. .. .. .+ ....+|.|+++. .|+++=.-- ..+.++++.++.|. +..+|.-.|
T Consensus 192 ~~dr~~----~~---~~----g~----~~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~mk---~gailIn~s 251 (333)
T 3ba1_A 192 YFSRSK----KP---NT----NY----TYYGSVVELASN--SDILVVACPLTPETTHIINREVIDALG---PKGVLINIG 251 (333)
T ss_dssp EECSSC----CT---TC----CS----EEESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC---TTCEEEECS
T ss_pred EECCCc----hh---cc----Cc----eecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHHHhcCC---CCCEEEECC
Confidence 888742 11 11 01 012478898886 898774421 23688888999884 456777666
Q ss_pred CC
Q 006454 500 NP 501 (644)
Q Consensus 500 NP 501 (644)
.-
T Consensus 252 rG 253 (333)
T 3ba1_A 252 RG 253 (333)
T ss_dssp CG
T ss_pred CC
Confidence 53
No 111
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=86.92 E-value=3.6 Score=42.03 Aligned_cols=110 Identities=16% Similarity=0.218 Sum_probs=73.4
Q ss_pred chHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE
Q 006454 362 GTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW 423 (644)
Q Consensus 362 GTaaVvLAgll~Alr~------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~ 423 (644)
.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+.. .|+ +++
T Consensus 102 ~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~-----~G~-------~V~ 169 (307)
T 1wwk_A 102 SVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANA-----LGM-------NIL 169 (307)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEE
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHH-----CCC-------EEE
Confidence 3444577778877662 2457899999999999999999998864 264 588
Q ss_pred EEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHHHHHcCCCCcEEEecC
Q 006454 424 LVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 424 lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLS 499 (644)
.+|+.. . . ...+ .+ .-...+|.|+++. .|+++=.-- ..+.++++.++.|. +.-++.=.|
T Consensus 170 ~~d~~~----~---~-~~~~-~~---g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lin~a 232 (307)
T 1wwk_A 170 LYDPYP----N---E-ERAK-EV---NGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK---KTAILINTS 232 (307)
T ss_dssp EECSSC----C---H-HHHH-HT---TCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC---TTCEEEECS
T ss_pred EECCCC----C---h-hhHh-hc---CccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC---CCeEEEECC
Confidence 888741 1 0 0111 11 1112378898885 898885422 34678888988884 566777777
Q ss_pred C
Q 006454 500 N 500 (644)
Q Consensus 500 N 500 (644)
.
T Consensus 233 r 233 (307)
T 1wwk_A 233 R 233 (307)
T ss_dssp C
T ss_pred C
Confidence 6
No 112
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.77 E-value=0.65 Score=47.85 Aligned_cols=38 Identities=21% Similarity=0.337 Sum_probs=34.2
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+|++.||+++|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D 69 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYD 69 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 468999999999999999999999876 76 789999987
No 113
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=86.63 E-value=0.87 Score=47.34 Aligned_cols=106 Identities=16% Similarity=0.284 Sum_probs=64.9
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCC---CCCHHH
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVD 458 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~---~~~L~e 458 (644)
++..||.|+|||..|.++|.+|+. .|+ + .+.|+|.+-=..++-..+|.+.. .|...... ..+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~-----~~~----~--~v~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGL-----KEL----G--DVVLFDIAEGTPQGKGLDIAESS-PVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHHHH-HHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHh-----CCC----C--eEEEEeCCchhHHHHHHHHhchh-hhcCCCCEEEEeCCH-H
Confidence 556799999999999999988865 365 2 59999985211100000122211 12211111 1344 7
Q ss_pred HHhccCCcEEEEccCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 006454 459 AVNAIKPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 459 aV~~vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 502 (644)
+++. .|++|=+.+.+ |. | -+++++.|.+++..-+|+-.|||.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv 127 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL 127 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc
Confidence 7776 89887554433 31 1 156778888899999999999997
No 114
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.58 E-value=0.55 Score=48.94 Aligned_cols=106 Identities=17% Similarity=0.265 Sum_probs=65.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhcc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 463 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 463 (644)
..||.++|||..|..+|..|+.. |+ ...+.|+|..-=..++-.-+|.+.. +|.+...-..+..++++.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~~-~~~~~~~i~~~~~~a~~~- 76 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDAL-PFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhhh-hhcCCcEEEECcHHHhcC-
Confidence 46899999999999999888753 55 2589999983110000000132221 232110001123456665
Q ss_pred CCcEEEEccCCC---C-----CC------CHHHHHHHHcCCCCcEEEecCCCC
Q 006454 464 KPTILIGTSGQG---R-----TF------TKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 464 kPtvLIG~S~~~---g-----~F------teevv~~Ma~~~erPIIFaLSNPt 502 (644)
.|++|=+.+.+ | +| -+++++.|.+++..-+|+-.|||.
T Consensus 77 -aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv 128 (326)
T 3vku_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch
Confidence 88877555443 1 23 258888999999999999999998
No 115
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.53 E-value=2.3 Score=44.55 Aligned_cols=95 Identities=13% Similarity=0.230 Sum_probs=61.2
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccc-cCCCCCHHHHH
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAV 460 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~eaV 460 (644)
++..||.|+|.|..|..+|..|... | .+++++|+. . +.++ .++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~---~~~~----~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----V---NAVQ----ALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----H---HHHH----HHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----H---HHHH----HHHHCCCEEeCCHHHHH
Confidence 3467999999999999999988753 5 357888863 1 1121 22221 12336888988
Q ss_pred hcc-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEecCCC
Q 006454 461 NAI-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNP 501 (644)
Q Consensus 461 ~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNP 501 (644)
+.. +||++|= +-..+ -.+++++.+... .+.-||.-+||-
T Consensus 77 ~~a~~~DvVi~-~vp~~-~v~~vl~~l~~~l~~g~iiId~st~ 117 (358)
T 4e21_A 77 AKLVKPRVVWL-MVPAA-VVDSMLQRMTPLLAANDIVIDGGNS 117 (358)
T ss_dssp HHSCSSCEEEE-CSCGG-GHHHHHHHHGGGCCTTCEEEECSSC
T ss_pred hcCCCCCEEEE-eCCHH-HHHHHHHHHHhhCCCCCEEEeCCCC
Confidence 874 5688773 33333 678888887654 356678777763
No 116
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=86.39 E-value=1.4 Score=44.04 Aligned_cols=94 Identities=13% Similarity=0.135 Sum_probs=57.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc--CCcccCCCccCCchhhhhhcc-------c-cCCCC-
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KGLIVSSRLESLQHFKKPWAH-------E-HEPVK- 454 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs--~GLi~~~R~~~L~~~k~~fA~-------~-~~~~~- 454 (644)
||.|+|+|..|..+|..|... | .+++++|+ +.- .++..++...+ . .....
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTE-------ILKSISAGREHPRLGVKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHH-------HHHHHHTTCCBTTTTBCCCSEEEECG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHH-------HHHHHHHhCcCcccCccccceEEecH
Confidence 799999999999999988753 5 36888887 311 01111111000 0 00112
Q ss_pred -CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 455 -ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 455 -~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
++.|+++. +|++|= +... ...+++++.++...+..+|..++|-.
T Consensus 63 ~~~~~~~~~--~D~vi~-~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLEN--AEVVLL-GVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTT--CSEEEE-CSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred HhHHHHHhc--CCEEEE-cCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 67777764 787763 3322 25788888876533456788888865
No 117
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=86.23 E-value=1.3 Score=47.54 Aligned_cols=124 Identities=13% Similarity=0.180 Sum_probs=76.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHH-hcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcccc---CCCCCHHHHH
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISK-QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH---EPVKELVDAV 460 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~-~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~---~~~~~L~eaV 460 (644)
.||.|+|||+. ++..++..+.+ ..++. -..++|+|.+- +|.+.........++.. ....++.|++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999994 55555444443 23442 36799999852 22110111111111111 1125788999
Q ss_pred hccCCcEEEEccCCCC---------------CC-------------------CHHHHHHHHcCCCCcEEEecCCCCCCCC
Q 006454 461 NAIKPTILIGTSGQGR---------------TF-------------------TKEVVEAMASLNEKPIIFSLSNPTSQSE 506 (644)
Q Consensus 461 ~~vkPtvLIG~S~~~g---------------~F-------------------teevv~~Ma~~~erPIIFaLSNPts~aE 506 (644)
+. .|+.|=..++++ .+ =.++++.|.++| .-+|+=.|||. .
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv--d- 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS--G- 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH--H-
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH--H-
Confidence 97 999998887763 22 258899999999 99999999998 2
Q ss_pred CCHHHHhcccCCcEEEeeC
Q 006454 507 CTAEEAYTWSQGRAIFASG 525 (644)
Q Consensus 507 ct~edA~~wT~GraifASG 525 (644)
+..+-+++.+.-.-+|.+|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 2333455656432566654
No 118
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.18 E-value=1.7 Score=42.21 Aligned_cols=98 Identities=15% Similarity=0.276 Sum_probs=59.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 464 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 464 (644)
.||.|+|+|..|..+|..+... |.. ..++++++|++ . +.++..++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 5899999999999999988753 531 12478888873 1 1222222221 11123678899986
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 006454 465 PTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 503 (644)
Q Consensus 465 PtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPts 503 (644)
+|++| ++..+ .-.+++++.+..+. +..+|...++-.+
T Consensus 64 aDvVi-lav~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILI-LSIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEE-ECSCT-TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 88877 33333 45778888876543 4557777777664
No 119
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=86.18 E-value=0.46 Score=47.67 Aligned_cols=103 Identities=17% Similarity=0.295 Sum_probs=61.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc-hhhhhhcccc--CCCCCHHHHH
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ-HFKKPWAHEH--EPVKELVDAV 460 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~-~~k~~fA~~~--~~~~~L~eaV 460 (644)
..||.|+|||+.|..+|..|... |. ..+++++|++---.++ ..++ .+..++..+. ....+. +++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~-~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDDP-EIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESCG-GGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCCH-HHh
Confidence 35899999999999999887642 53 1479999986300000 0010 0111111110 000132 445
Q ss_pred hccCCcEEEEccCCCCCCCH----------------HHHHHHHcCCCCcEEEecCCCCC
Q 006454 461 NAIKPTILIGTSGQGRTFTK----------------EVVEAMASLNEKPIIFSLSNPTS 503 (644)
Q Consensus 461 ~~vkPtvLIG~S~~~g~Fte----------------evv~~Ma~~~erPIIFaLSNPts 503 (644)
+ ..|++|=+.+.+. ++ ++++.|+++++..+|+.++||..
T Consensus 74 ~--~aD~Vii~v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 74 R--DADMVVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp T--TCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred C--CCCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 5 3888875554332 23 88899988888889999999984
No 120
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.14 E-value=0.62 Score=47.36 Aligned_cols=95 Identities=18% Similarity=0.319 Sum_probs=54.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc--------ccCCCCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH--------EHEPVKE 455 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~--------~~~~~~~ 455 (644)
+.||.|+|+|..|..+|..|..+ | .+++++|+.. . ..+..++.-.+ ......+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~----~---~~~~l~~~g~~~~~~~~~~~~~~~~~ 74 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRK----E---IVDLINVSHTSPYVEESKITVRATND 74 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSH----H---HHHHHHHHSCBTTBTTCCCCSEEESC
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCH----H---HHHHHHHhCCcccCCCCeeeEEEeCC
Confidence 47999999999999999998753 5 4688888741 1 11111111000 0001134
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCC
Q 006454 456 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQ 504 (644)
Q Consensus 456 L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~ 504 (644)
+.| ++ ..|++| ++-.+ ...+++++.++. +..+|..++|..+.
T Consensus 75 ~~~-~~--~aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 75 LEE-IK--KEDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp GGG-CC--TTEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred HHH-hc--CCCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 555 44 367555 22222 457777776654 45577888887654
No 121
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=86.05 E-value=0.95 Score=45.29 Aligned_cols=32 Identities=31% Similarity=0.523 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.||.|+|+|..|.+||..++.. |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998753 53 68899974
No 122
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=86.01 E-value=0.76 Score=52.09 Aligned_cols=37 Identities=27% Similarity=0.453 Sum_probs=33.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+|++.||+++|||..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D 359 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 359 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 56789999999999999999999875 76 789999997
No 123
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=85.81 E-value=5.7 Score=42.92 Aligned_cols=193 Identities=15% Similarity=0.206 Sum_probs=116.9
Q ss_pred cCCCceeecCC---cchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 006454 350 GTTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 408 (644)
Q Consensus 350 r~~~~~FNDDi---QGTaaVvLAgll~Alr~------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~ 408 (644)
+..++|||--- ..+|=-++|.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~-- 178 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL-- 178 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 45788888643 34566678888888763 24678899999999999999999987643
Q ss_pred HhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHH
Q 006454 409 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVE 484 (644)
Q Consensus 409 ~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~ 484 (644)
|+ +++.+|+.. + .... -+ ....+|.|+++. .|+++=.-- ..+.|+++.++
T Consensus 179 ---G~-------~V~~yd~~~-----~---~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~ 232 (416)
T 3k5p_A 179 ---GM-------TVRYYDTSD-----K---LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLR 232 (416)
T ss_dssp ---TC-------EEEEECTTC-----C---CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHH
T ss_pred ---CC-------EEEEECCcc-----h---hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHh
Confidence 65 688888741 1 1100 01 123689999987 898874321 23689999999
Q ss_pred HHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCC-CC--CcccCCeeecc-cCCCccccchhhhHHHHHhC
Q 006454 485 AMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSP-FD--PFEYGDNVFVP-GQANNAYIFPGLGLGLIMSG 560 (644)
Q Consensus 485 ~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~GraifASGSP-F~--pV~~~Gk~~~p-~Q~NN~yiFPGiglG~l~s~ 560 (644)
.|. +..++.=.|.=.---|---.+|+ ..|+.- +.|-. |+ |..-+.....| =+..|+.+-|=+|-...-+
T Consensus 233 ~mk---~gailIN~aRG~vvd~~aL~~aL--~~g~i~-gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea- 305 (416)
T 3k5p_A 233 KMK---KGAFLINNARGSDVDLEALAKVL--QEGHLA-GAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEA- 305 (416)
T ss_dssp HSC---TTEEEEECSCTTSBCHHHHHHHH--HTTSEE-EEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHH-
T ss_pred hCC---CCcEEEECCCChhhhHHHHHHHH--HcCCcc-EEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHH-
Confidence 994 67788888774422232233444 356543 22322 21 11101000011 2456899999876432222
Q ss_pred CcccCHHHHHHHHHHHHcccC
Q 006454 561 AIRVHDDMLLAAAEALAGQVT 581 (644)
Q Consensus 561 a~~Itd~M~laAA~aLA~~v~ 581 (644)
-+.|...+++.|.+.+.
T Consensus 306 ----~~~~~~~~~~nl~~~l~ 322 (416)
T 3k5p_A 306 ----QERIGTEVTRKLVEYSD 322 (416)
T ss_dssp ----HHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHh
Confidence 24566667777776653
No 124
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=85.75 E-value=0.85 Score=46.73 Aligned_cols=104 Identities=19% Similarity=0.210 Sum_probs=64.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcccc--CCCCCHHHHHhcc
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVNAI 463 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~eaV~~v 463 (644)
||.|+|||..|.++|-.|+.. |+ ...+.|+|.+-=..++-.-+|.+...+|-... ....+ .++++.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 799999999999999887653 54 24799999852111100001222221121110 00134 677876
Q ss_pred CCcEEEEccCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 006454 464 KPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 464 kPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 502 (644)
.|++|=+.+.+ |- | -+++++.|.+++..-+|+-.|||.
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv 121 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc
Confidence 89887555444 31 1 256778888999999999999998
No 125
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=85.75 E-value=4.9 Score=41.49 Aligned_cols=119 Identities=10% Similarity=0.135 Sum_probs=80.4
Q ss_pred CCCceeecCCc---chHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 006454 351 TTHLVFNDDIQ---GTASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 408 (644)
Q Consensus 351 ~~~~~FNDDiQ---GTaaVvLAgll~Alr~-------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~ 408 (644)
..+.+.|---. .+|=-+++.+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 91 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~--- 167 (331)
T 1xdw_A 91 LGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGRVAAQIFHG--- 167 (331)
T ss_dssp TTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHHHHHHHHHH---
T ss_pred CCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcCHHHHHHHHHHHH---
Confidence 46777775333 3444578888887761 2345888999999999999999998864
Q ss_pred HhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEc----cCCCCCCCHHHHH
Q 006454 409 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGT----SGQGRTFTKEVVE 484 (644)
Q Consensus 409 ~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~----S~~~g~Fteevv~ 484 (644)
.|+ +++.+|+.. .. . +. .++. ..+|.|+++. .|+++=. ....+.++++.++
T Consensus 168 --~G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~p~t~~t~~li~~~~l~ 222 (331)
T 1xdw_A 168 --MGA-------TVIGEDVFE----IK-G-IE----DYCT----QVSLDEVLEK--SDIITIHAPYIKENGAVVTRDFLK 222 (331)
T ss_dssp --TTC-------EEEEECSSC----CC-S-CT----TTCE----ECCHHHHHHH--CSEEEECCCCCTTTCCSBCHHHHH
T ss_pred --CCC-------EEEEECCCc----cH-H-HH----hccc----cCCHHHHHhh--CCEEEEecCCchHHHHHhCHHHHh
Confidence 264 588888742 11 1 11 1111 2378899886 8998864 1234688999998
Q ss_pred HHHcCCCCcEEEecCC
Q 006454 485 AMASLNEKPIIFSLSN 500 (644)
Q Consensus 485 ~Ma~~~erPIIFaLSN 500 (644)
.|. +.-++.=.|.
T Consensus 223 ~mk---~ga~lin~sr 235 (331)
T 1xdw_A 223 KMK---DGAILVNCAR 235 (331)
T ss_dssp TSC---TTEEEEECSC
T ss_pred hCC---CCcEEEECCC
Confidence 884 5668887774
No 126
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=85.68 E-value=4.8 Score=42.29 Aligned_cols=174 Identities=15% Similarity=0.090 Sum_probs=101.2
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 006454 351 TTHLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEI 407 (644)
Q Consensus 351 ~~~~~FNDDi---QGTaaVvLAgll~Alr~--------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m 407 (644)
..+.+.|--- +.+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~-- 185 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKP-- 185 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGG--
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHH--
Confidence 4566665322 23444578888887753 2567999999999999999999998864
Q ss_pred HHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHH
Q 006454 408 SKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVV 483 (644)
Q Consensus 408 ~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv 483 (644)
.|+ +++.+|+... . ....+.. ......+|.|+++. .|+++=.- ...+.|+++.+
T Consensus 186 ---~G~-------~V~~~dr~~~----~---~~~~~~~---g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 186 ---FGC-------NLLYHDRLQM----A---PELEKET---GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp ---GCC-------EEEEECSSCC----C---HHHHHHH---CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ---CCC-------EEEEeCCCcc----C---HHHHHhC---CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHH
Confidence 264 4888887421 0 1111110 01123579999987 89888431 23468999999
Q ss_pred HHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCccc-CCeeecccCCCccccchhhhHH
Q 006454 484 EAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLG 555 (644)
Q Consensus 484 ~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~GraifASGSPF~pV~~-~Gk~~~p~Q~NN~yiFPGiglG 555 (644)
+.|. +..+|.=.|+-.---|---.+|++ +|+.-.|.--=|++--. .... -=+..|+.+-|=++-.
T Consensus 244 ~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EP~~~~~p--L~~~~nvilTPHia~~ 309 (351)
T 3jtm_A 244 GKLK---KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVWDPQPAPKDHP--WRYMPNQAMTPHTSGT 309 (351)
T ss_dssp HHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTTCG--GGTSTTBCCCCSCGGG
T ss_pred hcCC---CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCCCCCCCCCCCh--hhcCCCEEECCcCCCC
Confidence 9994 677888777633222333334443 46644333222211100 0000 0134577788876543
No 127
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=85.67 E-value=1.1 Score=45.35 Aligned_cols=48 Identities=6% Similarity=0.197 Sum_probs=36.6
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 369 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 369 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.|+..+++..|.. ...+++++|||.+|.+++..|.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 5666677766654 56899999999999999888754 365 679988874
No 128
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=85.62 E-value=3.6 Score=43.25 Aligned_cols=144 Identities=13% Similarity=0.162 Sum_probs=88.8
Q ss_pred ceecccCCCCcH-HHHHHHHcCCCceeecCC---cchHHHHHHHHHHHHHH--------------------hCCCCCCce
Q 006454 331 IQVFEDFANHNA-FDLLEKYGTTHLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQR 386 (644)
Q Consensus 331 Iq~fEDf~~~nA-f~lL~ryr~~~~~FNDDi---QGTaaVvLAgll~Alr~--------------------~g~~L~d~r 386 (644)
|+ .-..+..|- .+.+.+.+..+.|.|--- +.+|=-+++.+|+..|- .+..|.+.+
T Consensus 88 I~-~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~t 166 (364)
T 2j6i_A 88 VV-VAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKT 166 (364)
T ss_dssp EE-ESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCE
T ss_pred EE-ECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCE
Confidence 55 455555542 233333222566666432 23444578888888762 367899999
Q ss_pred EEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCc
Q 006454 387 FLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPT 466 (644)
Q Consensus 387 iv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPt 466 (644)
|.|+|.|..|..+|+.+.. .|+ ++++.+|+... .....+ .+ ......+|.|+++. .|
T Consensus 167 vgIIG~G~IG~~vA~~l~~-----~G~------~~V~~~d~~~~-------~~~~~~-~~--g~~~~~~l~ell~~--aD 223 (364)
T 2j6i_A 167 IATIGAGRIGYRVLERLVP-----FNP------KELLYYDYQAL-------PKDAEE-KV--GARRVENIEELVAQ--AD 223 (364)
T ss_dssp EEEECCSHHHHHHHHHHGG-----GCC------SEEEEECSSCC-------CHHHHH-HT--TEEECSSHHHHHHT--CS
T ss_pred EEEECcCHHHHHHHHHHHh-----CCC------cEEEEECCCcc-------chhHHH-hc--CcEecCCHHHHHhc--CC
Confidence 9999999999999998853 264 33888886411 111111 11 00112479898885 89
Q ss_pred EEEEccCC----CCCCCHHHHHHHHcCCCCcEEEecCCC
Q 006454 467 ILIGTSGQ----GRTFTKEVVEAMASLNEKPIIFSLSNP 501 (644)
Q Consensus 467 vLIG~S~~----~g~Fteevv~~Ma~~~erPIIFaLSNP 501 (644)
+++=.--. .+.++++.+..|. +.-+|.-.|+-
T Consensus 224 vV~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~arG 259 (364)
T 2j6i_A 224 IVTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTARG 259 (364)
T ss_dssp EEEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSCG
T ss_pred EEEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCCC
Confidence 98854322 2688888888884 56788877763
No 129
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=85.54 E-value=0.75 Score=40.76 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=25.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.|+|+|||.||+-.|..|.+ .|+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 59999999999999988875 375 47788864
No 130
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=85.22 E-value=3.1 Score=44.01 Aligned_cols=179 Identities=15% Similarity=0.087 Sum_probs=100.8
Q ss_pred chHHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 006454 362 GTASVVLAGLISAMKF---------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 420 (644)
Q Consensus 362 GTaaVvLAgll~Alr~---------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~ 420 (644)
.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+.. .|+
T Consensus 133 ~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~------- 200 (365)
T 4hy3_A 133 PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA------- 200 (365)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------
Confidence 3455577777777662 2346889999999999999999998743 254
Q ss_pred eEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEc----cCCCCCCCHHHHHHHHcCCCCcEEE
Q 006454 421 KIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGT----SGQGRTFTKEVVEAMASLNEKPIIF 496 (644)
Q Consensus 421 ~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~----S~~~g~Fteevv~~Ma~~~erPIIF 496 (644)
+++.+|+.. . ....... .-...+|.|+++. .|+++=. ....+.++++.++.|. +.-++.
T Consensus 201 ~V~~~d~~~----~----~~~~~~~----g~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---~gailI 263 (365)
T 4hy3_A 201 RIRVFDPWL----P----RSMLEEN----GVEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---RGAAFI 263 (365)
T ss_dssp EEEEECSSS----C----HHHHHHT----TCEECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC---TTCEEE
T ss_pred EEEEECCCC----C----HHHHhhc----CeeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC---CCcEEE
Confidence 578788641 1 0011111 1112579999986 8998832 3345689999999885 567888
Q ss_pred ecCCCCCCCCCCHHHHhcccCCcEEEeeCCC-C--CCcccCCeeecccCCCccccchhhhHHHHHhCCcccCHHHHHHHH
Q 006454 497 SLSNPTSQSECTAEEAYTWSQGRAIFASGSP-F--DPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAA 573 (644)
Q Consensus 497 aLSNPts~aEct~edA~~wT~GraifASGSP-F--~pV~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA 573 (644)
=.|.-.---|---.+|+ ..|+.- | |-- | +|.. .+. .-=+..|+.+-|=+|-... .-.+.|...++
T Consensus 264 N~aRG~~vde~aL~~aL--~~g~i~-a-aLDV~~~EPl~-~~~--pL~~~~nvilTPHia~~t~-----e~~~~~~~~~~ 331 (365)
T 4hy3_A 264 LLSRADVVDFDALMAAV--SSGHIV-A-ASDVYPEEPLP-LDH--PVRSLKGFIRSAHRAGALD-----SAFKKMGDMVL 331 (365)
T ss_dssp ECSCGGGSCHHHHHHHH--HTTSSE-E-EESCCSSSSCC-TTC--GGGTCTTEEECCSCSSCCH-----HHHHHHHHHHH
T ss_pred ECcCCchhCHHHHHHHH--HcCCce-E-EeeCCCCCCCC-CCC--hhhcCCCEEECCccccCHH-----HHHHHHHHHHH
Confidence 77753322222222333 356543 3 321 1 1110 000 0114567888887664222 12345556666
Q ss_pred HHHHcccC
Q 006454 574 EALAGQVT 581 (644)
Q Consensus 574 ~aLA~~v~ 581 (644)
+-|.....
T Consensus 332 ~ni~~~~~ 339 (365)
T 4hy3_A 332 EDMDLMDR 339 (365)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 66666554
No 131
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=85.19 E-value=1 Score=45.92 Aligned_cols=100 Identities=20% Similarity=0.303 Sum_probs=61.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCcc----CCchhhhhhccccC--CCCCHHH
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHE--PVKELVD 458 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~~--~~~~L~e 458 (644)
.||.|+|||..|.++|-.++. .|+ . .++|+|.+- ++-+ +|.+...+...... ...++ +
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~----~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~ 66 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVE----GVPQGKALDLYEASPIEGFDVRVTGTNNY-A 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSS----SHHHHHHHHHHTTHHHHTCCCCEEEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCc----cHHHHHHHhHHHhHhhcCCCeEEEECCCH-H
Confidence 489999999999999997754 354 1 399999751 1110 12111111111100 01456 6
Q ss_pred HHhccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 459 AVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 459 aV~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
+++. .|+.|=+.+.+.. .-+++.+.+.+++..-+|+-.|||.
T Consensus 67 a~~~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 67 DTAN--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 122 (309)
T ss_dssp GGTT--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence 7775 8998866554432 1246788888888888887789998
No 132
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.07 E-value=1.6 Score=47.75 Aligned_cols=98 Identities=12% Similarity=0.176 Sum_probs=59.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhh-hhc-cccCCCCCHHHHHhc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWA-HEHEPVKELVDAVNA 462 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~-~fA-~~~~~~~~L~eaV~~ 462 (644)
.+|.|+|+|..|.++|..|+.. |. +++++|+. . +.++.... ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~----~---~~~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRT----Q---SKVDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----S---HHHHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCC----H---HHHHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999998753 63 57888863 1 11222211 000 011123578888875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 006454 463 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 502 (644)
Q Consensus 463 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 502 (644)
. +||++| ++-..+...+++++.+...- +.-||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 477766 33334345677887776543 346777788743
No 133
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=85.06 E-value=1.4 Score=46.57 Aligned_cols=96 Identities=23% Similarity=0.333 Sum_probs=54.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-----------ccCCC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-----------EHEPV 453 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-----------~~~~~ 453 (644)
.||+|+|||-.|..+|+.|++ .|- .-.+++++|++ .+ .+......+.. +..+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~---~~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LS---KCQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HH---HHHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HH---HHHHHHHHhhhhcCCceEEEEecCCCH
Confidence 489999998766666666543 231 01478888874 11 12222222211 11122
Q ss_pred CCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 006454 454 KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 500 (644)
Q Consensus 454 ~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 500 (644)
.++.++++..++|++|=+++. .+..+++++..+.. ..+| -+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~~g-~~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLRTG-VPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHHHT-CCEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHHhC-CCEE-EecC
Confidence 468888998899999977653 24567776654433 3444 2444
No 134
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=84.67 E-value=1.4 Score=45.91 Aligned_cols=126 Identities=19% Similarity=0.290 Sum_probs=65.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC-cccCCCccCCchhhhhhcc---c----------
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG-LIVSSRLESLQHFKKPWAH---E---------- 449 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G-Li~~~R~~~L~~~k~~fA~---~---------- 449 (644)
-.||.|+|||..|.|||..++.+ |+ ++.++|.+= .+... +...++.+.+ .
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~~~~~l~~~----~~~i~~~l~~~~~~g~~~~~~~~~ 69 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEPRQITGA----LENIRKEMKSLQQSGSLKGSLSAE 69 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCHHHHHHH----HHHHHHHHHHHHHTTCCCSSSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECCHHHHHHH----HHHHHHHHHHHHHcCCCCCccCHH
Confidence 36899999999999999988764 75 578888631 00000 0000111100 0
Q ss_pred -----cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccC--CcEEE
Q 006454 450 -----HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIF 522 (644)
Q Consensus 450 -----~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~--Graif 522 (644)
-....+|.|+++. .|.+|=+---.=-..+++.+.+.+++..-.|||=+.- =..+.+..+.+. .|+|.
T Consensus 70 ~~l~~i~~~~~l~~a~~~--ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTS----sl~is~ia~~~~~p~r~ig 143 (319)
T 3ado_A 70 EQLSLISSCTNLAEAVEG--VVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSS----CLLPSKLFTGLAHVKQCIV 143 (319)
T ss_dssp HHHHTEEEECCHHHHTTT--EEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCS----SCCHHHHHTTCTTGGGEEE
T ss_pred HHHhhcccccchHhHhcc--CcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhh----hccchhhhhhccCCCcEEE
Confidence 0112467777764 5555533222123456777777777766667653321 133333333222 34444
Q ss_pred eeCCCCCCccc
Q 006454 523 ASGSPFDPFEY 533 (644)
Q Consensus 523 ASGSPF~pV~~ 533 (644)
. -||.|+.+
T Consensus 144 ~--HffNP~~~ 152 (319)
T 3ado_A 144 A--HPVNPPYY 152 (319)
T ss_dssp E--EECSSTTT
T ss_pred e--cCCCCccc
Confidence 3 46666644
No 135
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=84.65 E-value=0.9 Score=51.33 Aligned_cols=38 Identities=26% Similarity=0.442 Sum_probs=33.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+|++.||+++|||..|..||+.|+.+ |+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 367789999999999999999999864 76 799999986
No 136
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=84.61 E-value=0.38 Score=49.41 Aligned_cols=100 Identities=18% Similarity=0.303 Sum_probs=62.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCcc----CCchhhhhhccccCC-CCCHHHH
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEP-VKELVDA 459 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~~~-~~~L~ea 459 (644)
.||.|+|||+.|..+|-+|+. .++ -..++|+|.+- ++.+ +|.+. .+|.++..- ..+ .++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~el~L~Di~~----~k~~g~a~dl~~~-~~~~~~~~v~~~~-~~a 64 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALAL-----LGV-----AREVVLVDLDR----KLAQAHAEDILHA-TPFAHPVWVWAGS-YGD 64 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSH----HHHHHHHHHHHTT-GGGSCCCEEEECC-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCh----hHHHHHHHHHHHh-HhhcCCeEEEECC-HHH
Confidence 389999999999998877654 243 25899999851 1110 12111 122211000 023 566
Q ss_pred HhccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 460 VNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
++. .|+.|=+.+.+.. .-+++++.|.+++..-+|+=.|||.
T Consensus 65 ~~~--aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (310)
T 2xxj_A 65 LEG--ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV 119 (310)
T ss_dssp GTT--EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred hCC--CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 765 8888855444432 1246777788889999999999998
No 137
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=84.41 E-value=0.87 Score=46.66 Aligned_cols=99 Identities=18% Similarity=0.364 Sum_probs=62.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCcc----CCchhhhhhcccc--CCCCCHHHH
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEH--EPVKELVDA 459 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~--~~~~~L~ea 459 (644)
||.|+|||..|.++|-.++.. |+ ..++|+|.+ .++.+ +|.+...++.+.. ....+. ++
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a 64 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGKPQGEALDLAHAAAELGVDIRISGSNSY-ED 64 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GG
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HH
Confidence 689999999999999776542 54 369999985 22211 1211110111110 001344 66
Q ss_pred HhccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 460 VNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
++. .|+.|=+.+.+.. .-+++++.|.+++..-+|+=.|||.
T Consensus 65 ~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (308)
T 2d4a_B 65 MRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV 119 (308)
T ss_dssp GTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence 775 9999866555532 1357888888888888777789998
No 138
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=84.37 E-value=3 Score=37.78 Aligned_cols=98 Identities=14% Similarity=0.129 Sum_probs=55.4
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHh
Q 006454 384 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVN 461 (644)
Q Consensus 384 d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~ 461 (644)
..+|+|.|| |-.|..+++.|++ .| .++++++++.- +...+......+.. +..+..++.++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 66 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVA 66 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHc
Confidence 368999998 8777777777754 25 36888887521 10111011111111 2122245778887
Q ss_pred ccCCcEEEEccCCCCC---------CCHHHHHHHHcCCCCcEEEecC
Q 006454 462 AIKPTILIGTSGQGRT---------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 462 ~vkPtvLIG~S~~~g~---------Fteevv~~Ma~~~erPIIFaLS 499 (644)
. +|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 67 ~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 67 G--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp T--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred C--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 5 8999988775432 1456677776554455665433
No 139
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=84.26 E-value=0.6 Score=48.37 Aligned_cols=106 Identities=18% Similarity=0.256 Sum_probs=64.2
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCC--CCHHHHH
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAV 460 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~eaV 460 (644)
+..||.|+|||..|.++|..|+. .|+ + .+.|+|.+-=..++-..+|.+.. .+....... .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEEEEcCCHHHH
Confidence 45799999999999999988765 365 2 69999985211000000122211 111111111 1224677
Q ss_pred hccCCcEEEEccCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 006454 461 NAIKPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 461 ~~vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 502 (644)
+. .|++|=+.+.+ |- | -+++++.+.+++..-+|+-.|||.
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 125 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL 125 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 76 89887555544 31 1 256778888899888999999997
No 140
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=84.17 E-value=6 Score=40.86 Aligned_cols=91 Identities=18% Similarity=0.201 Sum_probs=60.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHH
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 459 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 459 (644)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. ...+..-+. ..+|.|+
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~----~~----~~~~~~g~~----~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHR----KV----NVEKELKAR----YMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----CH----HHHHHHTEE----ECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch----hhhhhcCce----ecCHHHH
Confidence 67999999999999999999998753 253 688888741 10 111110011 1378888
Q ss_pred HhccCCcEEEEccCC----CCCCCHHHHHHHHcCCCCcEEEecCC
Q 006454 460 VNAIKPTILIGTSGQ----GRTFTKEVVEAMASLNEKPIIFSLSN 500 (644)
Q Consensus 460 V~~vkPtvLIG~S~~----~g~Fteevv~~Ma~~~erPIIFaLSN 500 (644)
++. .|+++=.-.. .+.++++.++.|. +. ++.-.|.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC
Confidence 886 8988743221 3578888888884 45 7766663
No 141
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=83.99 E-value=7.5 Score=39.83 Aligned_cols=117 Identities=18% Similarity=0.213 Sum_probs=79.2
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHHh---------------------CCCCCCceEEEeCcChHHHHHHHHHHHH
Q 006454 351 TTHLVFNDDI---QGTASVVLAGLISAMKFL---------------------GGSLADQRFLFLGAGEAGTGIAELIALE 406 (644)
Q Consensus 351 ~~~~~FNDDi---QGTaaVvLAgll~Alr~~---------------------g~~L~d~riv~~GAGsAG~GIA~ll~~~ 406 (644)
..+.+.|--- +.+|=-+++.+|+..|-. |..+.+.+|.|+|.|..|..+|+.+..
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 165 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALA- 165 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHH-
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHH-
Confidence 4566666433 233444788888876531 456889999999999999999998864
Q ss_pred HHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHH
Q 006454 407 ISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEV 482 (644)
Q Consensus 407 m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteev 482 (644)
.|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...+.++++.
T Consensus 166 ----~G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 166 ----FGM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp ----TTC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred ----CCC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 254 588888741 11 11 1 13578898886 89888652 2345788888
Q ss_pred HHHHHcCCCCcEEEecCCC
Q 006454 483 VEAMASLNEKPIIFSLSNP 501 (644)
Q Consensus 483 v~~Ma~~~erPIIFaLSNP 501 (644)
++.| .+..++.=.|.-
T Consensus 216 l~~m---k~ga~lin~srg 231 (311)
T 2cuk_A 216 LFAM---KRGAILLNTARG 231 (311)
T ss_dssp HTTS---CTTCEEEECSCG
T ss_pred HhhC---CCCcEEEECCCC
Confidence 8777 366788888873
No 142
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=83.98 E-value=0.79 Score=45.37 Aligned_cols=38 Identities=26% Similarity=0.448 Sum_probs=32.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+-
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 35578999999999999999999865 75 7899999973
No 143
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=83.97 E-value=0.76 Score=47.53 Aligned_cols=107 Identities=19% Similarity=0.250 Sum_probs=66.4
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC--cccCCCccCCchhhhhhccccCCC--CCHH
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG--LIVSSRLESLQHFKKPWAHEHEPV--KELV 457 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G--Li~~~R~~~L~~~k~~fA~~~~~~--~~L~ 457 (644)
.+..||.++|||..|.++|-.++. .|+ ..+.|+|.+- -..++...+|.+. .++.+..... .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEEEcCCH
Confidence 455799999999999999998875 254 3799999861 1111111112222 2333211111 1113
Q ss_pred HHHhccCCcEEEEccCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 006454 458 DAVNAIKPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 458 eaV~~vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 502 (644)
++++. .|+.|=+.+.+ |- | -+++++.+++++..-+|+-.|||.
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv 130 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV 130 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH
Confidence 56665 88887555443 21 2 257888888999999999999997
No 144
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=83.97 E-value=0.61 Score=48.31 Aligned_cols=104 Identities=20% Similarity=0.276 Sum_probs=63.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCC--CCHHHHHhcc
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAI 463 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~eaV~~v 463 (644)
||.|+|||..|.++|-.|+.. |+ -+.+.|+|.+-=..++-..+|.+.. .+....... .+..++++.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~~-~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRESS-PIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHHH-HHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhccc-cccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988753 54 2589999985311110000122211 121100111 134566776
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 464 KPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 464 kPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
.|++|=+.+.+ |- .-+++++.+.+++...+|+-.|||.
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL 121 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch
Confidence 88877454443 21 1256778888999999999999998
No 145
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=83.66 E-value=6.1 Score=41.31 Aligned_cols=176 Identities=18% Similarity=0.193 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeE
Q 006454 363 TASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 422 (644)
Q Consensus 363 TaaVvLAgll~Alr~--------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i 422 (644)
+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ ++
T Consensus 130 vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-----~G~-------~V 197 (340)
T 4dgs_A 130 VADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-----FGM-------SV 197 (340)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EE
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH-----CCC-------EE
Confidence 455567777776652 2467899999999999999999998863 264 58
Q ss_pred EEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHHHHHcCCCCcEEEec
Q 006454 423 WLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSL 498 (644)
Q Consensus 423 ~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaL 498 (644)
+.+|+.. ... . .+. ...+|.|+++. .|+++=.-- ..+.++++.++.|. +.-++.=.
T Consensus 198 ~~~dr~~----~~~--~-----~~~----~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk---~gailIN~ 257 (340)
T 4dgs_A 198 RYWNRST----LSG--V-----DWI----AHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALG---PEGIVVNV 257 (340)
T ss_dssp EEECSSC----CTT--S-----CCE----ECSSHHHHHHT--CSEEEECC----------CHHHHHHTT---TTCEEEEC
T ss_pred EEEcCCc----ccc--c-----Cce----ecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC---CCCEEEEC
Confidence 8888742 110 0 111 13579999986 898884322 23578888888885 56688877
Q ss_pred CCCCCCCCCCHHHHhcccCCcEEEeeCCCCC--CcccCCeeecccCCCccccchhhhHHHHHhCCcccCHHHHHHHHHHH
Q 006454 499 SNPTSQSECTAEEAYTWSQGRAIFASGSPFD--PFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEAL 576 (644)
Q Consensus 499 SNPts~aEct~edA~~wT~GraifASGSPF~--pV~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aL 576 (644)
|.=.---|-.-.+|++ +|+.-.|.=-=|+ |.. +. .-=+..|+.+-|=+|-...-+ .+.|...+++.|
T Consensus 258 aRG~vvde~aL~~aL~--~g~i~gA~LDVf~~EP~~-~~---~L~~~~nvilTPHia~~t~e~-----~~~~~~~~~~nl 326 (340)
T 4dgs_A 258 ARGNVVDEDALIEALK--SGTIAGAGLDVFVNEPAI-RS---EFHTTPNTVLMPHQGSATVET-----RMAMGKLVLANL 326 (340)
T ss_dssp SCC----------------CCSSEEEESCCSSSSSC-CS---HHHHSSSEEECSSCSSCCHHH-----HHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHH--cCCceEEEeCCcCCCCCC-cc---chhhCCCEEEcCcCCcCCHHH-----HHHHHHHHHHHH
Confidence 7644333444444443 3443222111111 110 00 112345777777665322111 234555556666
Q ss_pred HcccC
Q 006454 577 AGQVT 581 (644)
Q Consensus 577 A~~v~ 581 (644)
.....
T Consensus 327 ~~~~~ 331 (340)
T 4dgs_A 327 AAHFA 331 (340)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 55543
No 146
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=83.48 E-value=1.6 Score=46.56 Aligned_cols=119 Identities=20% Similarity=0.251 Sum_probs=67.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHH
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 460 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 460 (644)
.++.+||+|+|.|.+|+++|++|.+ .| -++...|.+-.......+.|...-.++-..+.+ . +.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G-------~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~-~---~~~ 69 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LG-------AIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHP-L---ELL 69 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TT-------CEEEEEESSCGGGCHHHHHHHHTTCEEEESCCC-G---GGG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CC-------CEEEEEeCCcccCChHHHHHHhCCCEEEECCCh-H---Hhh
Confidence 4678999999999999999888865 36 468889985211000000111111111111111 1 111
Q ss_pred hccC-CcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCcccCCeee
Q 006454 461 NAIK-PTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVF 538 (644)
Q Consensus 461 ~~vk-PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~GraifASGSPF~pV~~~Gk~~ 538 (644)
. + +|.+|=.++.+ .=++++.++.. ..-||| +. +|-++...+++.|-.||| ||||-
T Consensus 70 ~--~~~d~vv~spgi~-~~~p~~~~a~~--~gi~v~-------~~----~e~~~~~~~~~~IaVTGT-------nGKTT 125 (451)
T 3lk7_A 70 D--EDFCYMIKNPGIP-YNNPMVKKALE--KQIPVL-------TE----VELAYLVSESQLIGITGS-------NGKTT 125 (451)
T ss_dssp G--SCEEEEEECTTSC-TTSHHHHHHHH--TTCCEE-------CH----HHHHHHHCCSEEEEEECS-------SCHHH
T ss_pred c--CCCCEEEECCcCC-CCChhHHHHHH--CCCcEE-------eH----HHHHHHhcCCCEEEEECC-------CCHHH
Confidence 1 3 68888666665 34677766654 345665 22 333455567788889997 67654
No 147
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=83.46 E-value=11 Score=38.60 Aligned_cols=118 Identities=17% Similarity=0.199 Sum_probs=78.4
Q ss_pred cCCCceeec-CCcc--hHHHHHHHHHHHHHHh-----------------CCCCCCceEEEeCcChHHHHHHHHHHHHHHH
Q 006454 350 GTTHLVFND-DIQG--TASVVLAGLISAMKFL-----------------GGSLADQRFLFLGAGEAGTGIAELIALEISK 409 (644)
Q Consensus 350 r~~~~~FND-DiQG--TaaVvLAgll~Alr~~-----------------g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~ 409 (644)
+..+++.|- +... +|=-+++.+|+..|-. +..|.+.++.|+|.|..|..+|+.+..
T Consensus 70 ~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~---- 145 (303)
T 1qp8_A 70 PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAA---- 145 (303)
T ss_dssp CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHH----
T ss_pred hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHH----
Confidence 346777774 3322 3334788888876631 226889999999999999999998864
Q ss_pred hcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 006454 410 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 485 (644)
Q Consensus 410 ~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~ 485 (644)
.|+ +++.+|+..- + . . .....+|.|+++. .|+++=.- ...+.++++.++.
T Consensus 146 -~G~-------~V~~~dr~~~------~---~---~----~~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~ 199 (303)
T 1qp8_A 146 -LGA-------QVRGFSRTPK------E---G---P----WRFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLAL 199 (303)
T ss_dssp -TTC-------EEEEECSSCC------C---S---S----SCCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred -CCC-------EEEEECCCcc------c---c---C----cccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhh
Confidence 264 5888887532 0 0 0 1123468888875 88887542 2345788888877
Q ss_pred HHcCCCCcEEEecCC
Q 006454 486 MASLNEKPIIFSLSN 500 (644)
Q Consensus 486 Ma~~~erPIIFaLSN 500 (644)
|. +..++.=.|.
T Consensus 200 mk---~gailin~sr 211 (303)
T 1qp8_A 200 MA---EDAVFVNVGR 211 (303)
T ss_dssp SC---TTCEEEECSC
T ss_pred CC---CCCEEEECCC
Confidence 74 5668777776
No 148
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=83.43 E-value=1.1 Score=37.27 Aligned_cols=84 Identities=17% Similarity=0.189 Sum_probs=51.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhh---hhcc-ccCCCCCHHHH
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK---PWAH-EHEPVKELVDA 459 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~---~fA~-~~~~~~~L~ea 459 (644)
..+|+|+|+|..|..+++.+.. .|. .+++++|++. . .+...+. .+.. +.....++.++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~----~---~~~~~~~~~~~~~~~d~~~~~~~~~~ 66 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL----A---ALAVLNRMGVATKQVDAKDEAGLAKA 66 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH----H---HHHHHHTTTCEEEECCTTCHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH----H---HHHHHHhCCCcEEEecCCCHHHHHHH
Confidence 4689999999999999888764 252 4688888741 1 1222111 1100 11112356666
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHcC
Q 006454 460 VNAIKPTILIGTSGQGRTFTKEVVEAMASL 489 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~ 489 (644)
++ ++|++|=+. |..++..+++.+.+.
T Consensus 67 ~~--~~d~vi~~~--~~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 67 LG--GFDAVISAA--PFFLTPIIAKAAKAA 92 (118)
T ss_dssp TT--TCSEEEECS--CGGGHHHHHHHHHHT
T ss_pred Hc--CCCEEEECC--CchhhHHHHHHHHHh
Confidence 66 589998665 334677888777653
No 149
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=83.42 E-value=1.8 Score=41.99 Aligned_cols=95 Identities=14% Similarity=0.124 Sum_probs=56.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhh---hhhccccCCCCCHHHHHhc
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK---KPWAHEHEPVKELVDAVNA 462 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k---~~fA~~~~~~~~L~eaV~~ 462 (644)
||.|+|+|..|..+|..|... | .+++++|+.- .+.+.+.... ..+ .......+ .++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~-~~~~~~~~-~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIF-NESLTAND-PDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEE-EEEEEESC-HHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCcee-eeeeeecC-ccccCC
Confidence 799999999999999988652 5 3688888752 2111121100 000 00001123 466764
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 006454 463 IKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 502 (644)
Q Consensus 463 vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 502 (644)
.|++|= +.... -.+++++.++... +..+|..++|..
T Consensus 64 --~d~vi~-~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLLV-TLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEEE-CSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEEE-EecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 888773 33332 3689999887643 456777789865
No 150
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=83.27 E-value=3.7 Score=40.73 Aligned_cols=106 Identities=11% Similarity=0.131 Sum_probs=63.0
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh----hhhhcc-ccCCCCC
Q 006454 382 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF----KKPWAH-EHEPVKE 455 (644)
Q Consensus 382 L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~----k~~fA~-~~~~~~~ 455 (644)
++..||+|.|| |-.|..+++.|++. |- .-+++.+|+...- .....+... ...+.. +..+..+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYS--GNLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTT--CCGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEeccccc--cchhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999998 88888888888753 52 2367777775321 111111111 111111 1222346
Q ss_pred HHHHHhccCCcEEEEccCCCCCC----------------CHHHHHHHHcCCCCcEEEecC
Q 006454 456 LVDAVNAIKPTILIGTSGQGRTF----------------TKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 456 L~eaV~~vkPtvLIG~S~~~g~F----------------teevv~~Ma~~~erPIIFaLS 499 (644)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 88888888899999887754321 366888888776666888543
No 151
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=83.24 E-value=1.2 Score=45.21 Aligned_cols=98 Identities=16% Similarity=0.202 Sum_probs=58.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC--------cccCCCccCCchhhhhhccccCCCCCH
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG--------LIVSSRLESLQHFKKPWAHEHEPVKEL 456 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G--------Li~~~R~~~L~~~k~~fA~~~~~~~~L 456 (644)
.||.|+|+|+-|..+|..|.+. | .+++++|+.- +...++ ....++ + ++.....++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~--~~g~~~--~-~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA--TLGDYT--F-RPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET--TTCCEE--E-CCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec--CCCcEE--E-eeeeeECCH
Confidence 5899999999999999888653 4 4688888753 111110 000000 0 000011344
Q ss_pred HHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 006454 457 VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 503 (644)
Q Consensus 457 ~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPts 503 (644)
.++.+ .+|++| ++... ..++++++.++..- +..+|+.+.|-..
T Consensus 66 ~~~~~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 44432 478776 55444 34678999987543 4567888999764
No 152
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=83.17 E-value=1.8 Score=44.22 Aligned_cols=103 Identities=20% Similarity=0.299 Sum_probs=64.1
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc--CCcccCCCccCCchhhhhhccccCCC----CCHHH
Q 006454 386 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KGLIVSSRLESLQHFKKPWAHEHEPV----KELVD 458 (644)
Q Consensus 386 riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs--~GLi~~~R~~~L~~~k~~fA~~~~~~----~~L~e 458 (644)
||+|.|| |..|..++..|+. .|+ ...++|+|. +-=-.++-..+|.+.. ++....-.. .++.+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~-~~~~~~~~i~~~~d~l~~ 70 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLREDIYDAL-AGTRSDANIYVESDENLR 70 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHHHHHHHHH-TTSCCCCEEEEEETTCGG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHHHHHHHhH-HhcCCCeEEEeCCcchHH
Confidence 8999999 9999998887753 244 256999997 2100000000122211 222100011 13677
Q ss_pred HHhccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 459 AVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 459 aV~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
+++. .|++|=+.+.+.. .+++++++|.+++ +.+|+-.|||.
T Consensus 71 al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv 125 (313)
T 1hye_A 71 IIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV 125 (313)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence 8876 8988877665531 3568889999999 99999999998
No 153
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=82.95 E-value=2.4 Score=40.46 Aligned_cols=80 Identities=16% Similarity=0.228 Sum_probs=49.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHH
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 459 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 459 (644)
..+...||.|+|+|..|..+|..+... | .+++++|+. .. +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~--------~~--------------------~ 54 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK--------DQ--------------------A 54 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT--------CC--------------------C
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC--------HH--------------------H
Confidence 346678999999999999999988652 5 368888763 11 1
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 006454 460 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 503 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts 503 (644)
++ ++|++|= +.. ....+++++.++...+..+|.-+||+..
T Consensus 55 ~~--~aD~vi~-av~-~~~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 55 TT--LGEIVIM-AVP-YPALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp SS--CCSEEEE-CSC-HHHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred hc--cCCEEEE-cCC-cHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 22 3566552 222 2345677776654323678888999653
No 154
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=82.68 E-value=2.6 Score=42.70 Aligned_cols=109 Identities=14% Similarity=0.170 Sum_probs=63.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhh-----hhccc------cCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-----PWAHE------HEP 452 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~-----~fA~~------~~~ 452 (644)
..||.|+|+|..|..+|..+...-... . ....+++++|+..-.. .+. .....++ .|-.. ...
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~-~----~~~~~V~~~~r~~~~~-~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQL-A----QFDPRVTMWVFEEDIG-GKK-LTEIINTQHENVKYLPGHKLPPNVVA 80 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHC-T----TEEEEEEEECCCCBSS-SSB-HHHHHHHHSCCTTTSTTCCCCTTEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcc-c----CCCCeEEEEEcChhhh-hhH-HHHHHHhcCcccccCCcccCccCeEE
Confidence 368999999999999999997652110 0 0014688888753211 000 0111110 01000 001
Q ss_pred CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 006454 453 VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 503 (644)
Q Consensus 453 ~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPts 503 (644)
..++.|+++. .|++| ++... ...+++++.++.+. +..+|..++|-..
T Consensus 81 ~~~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 81 VPDVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp ESSHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred EcCHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 2468888875 88776 33333 46789999887653 4668889999654
No 155
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=82.64 E-value=2.4 Score=43.03 Aligned_cols=101 Identities=12% Similarity=0.180 Sum_probs=60.0
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhc
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 462 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 462 (644)
+..||.|+|+|..|..+|..|... |.. ...+++++|+. .++ +.++..++ + ...-..+..|+++.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~~l~~-~--G~~~~~~~~e~~~~ 84 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVSALRK-M--GVKLTPHNKETVQH 84 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHHHHHH-H--TCEEESCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHHHHHH-c--CCEEeCChHHHhcc
Confidence 345899999999999999988653 531 11468888873 110 01111111 0 00112467788875
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCCC
Q 006454 463 IKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPTS 503 (644)
Q Consensus 463 vkPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPts 503 (644)
.|++| ++-.+ ...+++++.+... .+..+|.-++|..+
T Consensus 85 --aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 85 --SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp --CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred --CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 77666 33333 4577888877653 34568888888774
No 156
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=82.60 E-value=2.1 Score=42.68 Aligned_cols=75 Identities=20% Similarity=0.230 Sum_probs=50.5
Q ss_pred CcHHHHHHHHcC------CCceeecCCcchHHHHHHHHHHHHHHh-CCCCCCceEEEeC-cChHHHHHHHHHHHHHHHhc
Q 006454 340 HNAFDLLEKYGT------THLVFNDDIQGTASVVLAGLISAMKFL-GGSLADQRFLFLG-AGEAGTGIAELIALEISKQT 411 (644)
Q Consensus 340 ~nAf~lL~ryr~------~~~~FNDDiQGTaaVvLAgll~Alr~~-g~~L~d~riv~~G-AGsAG~GIA~ll~~~m~~~~ 411 (644)
..+.+++++-+. ...+| .|..|.- .--.|++.+++.. +.+++..++||.| +|.+|.++|..+++ .
T Consensus 70 ~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~-----~ 142 (287)
T 1lu9_A 70 AAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAG-----E 142 (287)
T ss_dssp HHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHH-----T
T ss_pred HHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHH-----C
Confidence 356666665542 22234 3444532 2456777788776 7889999999999 89888888888764 3
Q ss_pred CCChhhhcCeEEEEccC
Q 006454 412 NMPLEETRKKIWLVDSK 428 (644)
Q Consensus 412 Gls~eeAr~~i~lvDs~ 428 (644)
|. +++++|++
T Consensus 143 G~-------~V~i~~R~ 152 (287)
T 1lu9_A 143 GA-------EVVLCGRK 152 (287)
T ss_dssp TC-------EEEEEESS
T ss_pred cC-------EEEEEECC
Confidence 53 38888874
No 157
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=82.37 E-value=3.8 Score=42.76 Aligned_cols=100 Identities=19% Similarity=0.176 Sum_probs=58.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhh--hhhccc------cCCCCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK--KPWAHE------HEPVKE 455 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k--~~fA~~------~~~~~~ 455 (644)
..||.|+|+|+-|..+|..|.+. | .+++++|++-- +.+.+.... ..|-.. .....+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~----~~~~i~~~~~~~~~l~g~~l~~~i~~t~d 92 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESD----HVDEMQAEGVNNRYLPNYPFPETLKAYCD 92 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHH----HHHHHHHHSSBTTTBTTCCCCTTEEEESC
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHH----HHHHHHHcCCCcccCCCCccCCCeEEECC
Confidence 46899999999999999988753 5 35778887411 000011100 001000 001247
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 006454 456 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 503 (644)
Q Consensus 456 L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPts 503 (644)
+.|+++. +|++| ++. +-.+.+++++.++.+. +..+|..++|-..
T Consensus 93 ~~ea~~~--aDvVi-laV-p~~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 93 LKASLEG--VTDIL-IVV-PSFAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHHHTT--CCEEE-ECC-CHHHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHHHhc--CCEEE-ECC-CHHHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 8888875 77766 333 2236778888877644 4567778888554
No 158
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=82.24 E-value=3.6 Score=42.72 Aligned_cols=189 Identities=17% Similarity=0.268 Sum_probs=110.5
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHH
Q 006454 351 TTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 409 (644)
Q Consensus 351 ~~~~~FNDDi---QGTaaVvLAgll~Alr~------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~ 409 (644)
..+++.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 4677777642 33444577777777642 26679999999999999999999988642
Q ss_pred hcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 006454 410 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 485 (644)
Q Consensus 410 ~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~ 485 (644)
|+ +++.+|+..- . .+.....+ ...+|.|+++. .|+++=.- ...+.|+++.++.
T Consensus 160 --G~-------~V~~~dr~~~----~---~~~~~~~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 160 --GM-------HVIGVNTTGH----P---ADHFHETV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp --TC-------EEEEEESSCC----C---CTTCSEEE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred --CC-------EEEEECCCcc----h---hHhHhhcc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 64 5888887521 1 11111111 12468888886 88887431 2246889999888
Q ss_pred HHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEee-----CCCCCCcccCCeeecccCCCccccchhhhHHHHHhC
Q 006454 486 MASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFAS-----GSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSG 560 (644)
Q Consensus 486 Ma~~~erPIIFaLSNPts~aEct~edA~~wT~GraifAS-----GSPF~pV~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~ 560 (644)
|. +..++.=.|.-..--|-.-.+|++ +|+.-.|. .-|.++ +. .-=+..|+.+-|=+|-.
T Consensus 217 mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~----~~--pL~~~~nvilTPHia~~----- 280 (324)
T 3evt_A 217 TK---QQPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPEPLPT----DH--PLWQRDDVLITPHISGQ----- 280 (324)
T ss_dssp CC---SCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSSSCCT----TC--GGGGCSSEEECCSCTTC-----
T ss_pred CC---CCCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCCCCCC----CC--hhhcCCCEEEcCccccC-----
Confidence 84 567887777633222322233333 35432211 112111 00 01134578888876521
Q ss_pred CcccCHHHHHHHHHHHHcccC
Q 006454 561 AIRVHDDMLLAAAEALAGQVT 581 (644)
Q Consensus 561 a~~Itd~M~laAA~aLA~~v~ 581 (644)
...-.+.|...+++-|...+.
T Consensus 281 t~~~~~~~~~~~~~nl~~~l~ 301 (324)
T 3evt_A 281 IAHFRATVFPIFAANFAQFVK 301 (324)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHh
Confidence 122346677777777766653
No 159
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=82.08 E-value=0.93 Score=46.12 Aligned_cols=110 Identities=17% Similarity=0.158 Sum_probs=65.4
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc---ccCCCccCCchhhhhhccccCCCCCHHHHH
Q 006454 385 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL---IVSSRLESLQHFKKPWAHEHEPVKELVDAV 460 (644)
Q Consensus 385 ~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL---i~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 460 (644)
.||+|.|| |..|.-++..|+. .|.--..-...++++|...- ..... .+|.+...+|..+.....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~-~dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVV-MELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHH-HHHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchh-hhhhcccccccCCeEeccChHHHh
Confidence 48999997 9999999888754 24310000137999997420 00000 012111112322222225688888
Q ss_pred hccCCcEEEEccCCCCC--------------CCHHHHHHHHcCC-CCcEEEecCCCC
Q 006454 461 NAIKPTILIGTSGQGRT--------------FTKEVVEAMASLN-EKPIIFSLSNPT 502 (644)
Q Consensus 461 ~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~-erPIIFaLSNPt 502 (644)
+. +|++|=+.+.+.. .|.++++++.+++ .+.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 75 9999977776532 3556788888876 566788899996
No 160
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=82.07 E-value=3.1 Score=44.90 Aligned_cols=99 Identities=15% Similarity=0.176 Sum_probs=61.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHhc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 462 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 462 (644)
..||.|+|+|..|..+|..|... |. +++++|+. . +.++..+..+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~----~---~~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRT----T---SKTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----H---HHHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCC----H---HHHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 36899999999999999988652 53 57788763 1 112222221100 01123578888875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 006454 463 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 502 (644)
Q Consensus 463 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 502 (644)
. +||++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 478777 44444445678888776543 456788888854
No 161
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.96 E-value=1.9 Score=46.73 Aligned_cols=97 Identities=19% Similarity=0.225 Sum_probs=59.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc-----cccCCCCCHHHHH
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-----HEHEPVKELVDAV 460 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-----~~~~~~~~L~eaV 460 (644)
||.|+|+|..|..+|..|... |. +++++|+.. + .++...+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~---~~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----S---KSEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----H---HHHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 799999999999999988652 53 588888741 1 1111111110 0011235788888
Q ss_pred hcc-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCC
Q 006454 461 NAI-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 502 (644)
Q Consensus 461 ~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 502 (644)
+.. ++|++| ++...+...+++++.+... .+.-||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 754 488877 3443433567888777643 3456788888854
No 162
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=81.71 E-value=7 Score=40.59 Aligned_cols=139 Identities=16% Similarity=0.132 Sum_probs=87.1
Q ss_pred CCceeecC-C--cchHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHH
Q 006454 352 THLVFNDD-I--QGTASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 409 (644)
Q Consensus 352 ~~~~FNDD-i--QGTaaVvLAgll~Alr~-------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~ 409 (644)
.+.+.|-- . ..+|=-+++-+|+..|- .|..|.+.++.|+|.|..|-.+|+.+...
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~--- 163 (334)
T 2pi1_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF--- 163 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC---
Confidence 45555542 1 23455677888877752 35678999999999999999999988642
Q ss_pred hcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 006454 410 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 485 (644)
Q Consensus 410 ~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~ 485 (644)
|+ +++.+|+.. . . . .. .......+|.|+++. .|+++=.- ...+.|+++.++.
T Consensus 164 --G~-------~V~~~d~~~----~--~-~--~~----~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 219 (334)
T 2pi1_A 164 --GM-------KVLCYDVVK----R--E-D--LK----EKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp --TC-------EEEEECSSC----C--H-H--HH----HTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred --cC-------EEEEECCCc----c--h-h--hH----hcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhh
Confidence 64 688888742 1 1 1 00 111112359999986 89887541 3346899999999
Q ss_pred HHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEE
Q 006454 486 MASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIF 522 (644)
Q Consensus 486 Ma~~~erPIIFaLSNPts~aEct~edA~~wT~Graif 522 (644)
|. +..||.=.|.-..--|-.-.+|+ .+|+.-.
T Consensus 220 mk---~gailIN~aRg~~vd~~aL~~aL--~~g~i~g 251 (334)
T 2pi1_A 220 MK---DGVYLINTARGKVVDTDALYRAY--QRGKFSG 251 (334)
T ss_dssp SC---TTEEEEECSCGGGBCHHHHHHHH--HTTCEEE
T ss_pred CC---CCcEEEECCCCcccCHHHHHHHH--HhCCceE
Confidence 94 66788777763322233333343 3455443
No 163
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=81.61 E-value=0.74 Score=47.91 Aligned_cols=106 Identities=16% Similarity=0.204 Sum_probs=64.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCC-CCCHHHHHhc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP-VKELVDAVNA 462 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~-~~~L~eaV~~ 462 (644)
-.||.|+|||..|..+|..|+.. |+ ...+.++|.+-=..++-.-+|.+. .+|....-. ..+-.++++.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 36899999999999999988753 54 258999997410000000013332 233211000 1122356665
Q ss_pred cCCcEEEEccCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 006454 463 IKPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 463 vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 502 (644)
.|++|=+.+.+ |- | -+++++.+++++..-+|+-.|||.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv 125 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV 125 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH
Confidence 88877554433 31 1 257778888999999999999998
No 164
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=81.23 E-value=15 Score=38.45 Aligned_cols=120 Identities=12% Similarity=0.194 Sum_probs=80.8
Q ss_pred CCCceeecCCc---chHHHHHHHHHHHHHH----------h----------CCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 006454 351 TTHLVFNDDIQ---GTASVVLAGLISAMKF----------L----------GGSLADQRFLFLGAGEAGTGIAELIALEI 407 (644)
Q Consensus 351 ~~~~~FNDDiQ---GTaaVvLAgll~Alr~----------~----------g~~L~d~riv~~GAGsAG~GIA~ll~~~m 407 (644)
..+.+.|---- .+|=-+++-+|+..|- . |..|.+.++.|+|.|..|..+|+.+...
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~- 170 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM- 170 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC-
Confidence 35777775332 3455678888887761 2 3467899999999999999999988642
Q ss_pred HHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHH
Q 006454 408 SKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVV 483 (644)
Q Consensus 408 ~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv 483 (644)
|+ +++.+|+.. . .... ..+ ...+|.|+++. .|+++=.-- ..+.|+++.+
T Consensus 171 ----G~-------~V~~~d~~~----~--~~~~----~~~----~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 171 ----GA-------KVIAYDVAY----N--PEFE----PFL----TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp ----TC-------EEEEECSSC----C--GGGT----TTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHH
T ss_pred ----CC-------EEEEECCCh----h--hhhh----ccc----cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHH
Confidence 64 688888852 1 1011 111 11379999986 899885432 3468999999
Q ss_pred HHHHcCCCCcEEEecCCC
Q 006454 484 EAMASLNEKPIIFSLSNP 501 (644)
Q Consensus 484 ~~Ma~~~erPIIFaLSNP 501 (644)
+.|. +..++.=.|.-
T Consensus 224 ~~mk---~gailIN~aRg 238 (343)
T 2yq5_A 224 KEMK---KSAYLINCARG 238 (343)
T ss_dssp HHSC---TTCEEEECSCG
T ss_pred hhCC---CCcEEEECCCC
Confidence 9994 66788877653
No 165
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=81.19 E-value=1.2 Score=46.13 Aligned_cols=89 Identities=21% Similarity=0.311 Sum_probs=53.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc----ccCCCCCHHHHH
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----EHEPVKELVDAV 460 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----~~~~~~~L~eaV 460 (644)
-||+++|||-.|--+|+.|.+ ..++.++|... +.++..+ +++. +..+..+|.+++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~~-~~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKVK-EFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHHT-TTSEEEECCTTCHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHHh-ccCCcEEEecCCHHHHHHHH
Confidence 379999999988777766632 13577777631 1122221 2222 222334688888
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 006454 461 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 500 (644)
Q Consensus 461 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 500 (644)
++ .|++|- +.|.-+..+++++-.+... . ++-+|-
T Consensus 76 ~~--~DvVi~--~~p~~~~~~v~~~~~~~g~-~-yvD~s~ 109 (365)
T 3abi_A 76 KE--FELVIG--ALPGFLGFKSIKAAIKSKV-D-MVDVSF 109 (365)
T ss_dssp TT--CSEEEE--CCCGGGHHHHHHHHHHHTC-E-EEECCC
T ss_pred hC--CCEEEE--ecCCcccchHHHHHHhcCc-c-eEeeec
Confidence 85 798875 4455678888888665443 2 455663
No 166
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=81.16 E-value=0.92 Score=42.45 Aligned_cols=94 Identities=19% Similarity=0.191 Sum_probs=59.0
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc---c--ccCCCCCHHHH
Q 006454 386 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA---H--EHEPVKELVDA 459 (644)
Q Consensus 386 riv~~G-AGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA---~--~~~~~~~L~ea 459 (644)
||+|+| +|..|..+|..+.. .| .+++++|++ .+ .++..++.+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~----~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRR----EE---KAEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESS----HH---HHHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCC----HH---HHHHHHHHhccccccCCCC-hhhHHHH
Confidence 799999 99999999988864 24 368888874 11 1222211111 0 011 2478888
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 006454 460 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 503 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts 503 (644)
++. .|++|=+.. + ...+++++.+....+..+|.-++|+.+
T Consensus 62 ~~~--~D~Vi~~~~-~-~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-W-EHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-H-HHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-h-hhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 886 898884433 3 235677776654334678999999774
No 167
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=81.14 E-value=3.5 Score=42.90 Aligned_cols=177 Identities=19% Similarity=0.180 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 006454 363 TASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 426 (644)
Q Consensus 363 TaaVvLAgll~Alr~----------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvD 426 (644)
+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 170 (324)
T 3hg7_A 103 MSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----GM-------KVLGVS 170 (324)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 444577777777663 35679999999999999999999998643 64 588888
Q ss_pred cCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEc----cCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 427 SKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGT----SGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 427 s~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~----S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
+.. .. ..... ......+|.|+++. .|+++=. ...-+.|+++.++.|. +..++.=.|.-.
T Consensus 171 r~~----~~---~~~~~-----~~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk---~gailIN~aRG~ 233 (324)
T 3hg7_A 171 RSG----RE---RAGFD-----QVYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK---PGAILFNVGRGN 233 (324)
T ss_dssp SSC----CC---CTTCS-----EEECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC---TTCEEEECSCGG
T ss_pred CCh----HH---hhhhh-----cccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC---CCcEEEECCCch
Confidence 754 11 11111 11123579898886 8888753 1224678888887774 567887777533
Q ss_pred CCCCCCHHHHhcccCCcEEEe-----eCCCCCCcccCCeeecccCCCccccchhhhHHHHHhCCcccCHHHHHHHHHHHH
Q 006454 503 SQSECTAEEAYTWSQGRAIFA-----SGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALA 577 (644)
Q Consensus 503 s~aEct~edA~~wT~GraifA-----SGSPF~pV~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA 577 (644)
.--|---.+|++ +|+.-.| ..=|.++- . .-=+..|+.+-|=++- .+. ...|...+++-|.
T Consensus 234 ~vde~aL~~aL~--~g~i~ga~lDV~~~EPl~~~----~--pL~~~~nvilTPHia~------~t~-~~~~~~~~~~nl~ 298 (324)
T 3hg7_A 234 AINEGDLLTALR--TGKLGMAVLDVFEQEPLPAD----S--PLWGQPNLIITPHNSA------YSF-PDDVAQIFVRNYI 298 (324)
T ss_dssp GBCHHHHHHHHH--TTSSSEEEESCCSSSSCCTT----C--TTTTCTTEEECCSCSS------CCC-HHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHH--cCCceEEEeccCCCCCCCCC----C--hhhcCCCEEEeCCCcc------ccH-HHHHHHHHHHHHH
Confidence 222222223332 3443111 11122110 0 0013457888887653 222 3567777777777
Q ss_pred cccCcc
Q 006454 578 GQVTQE 583 (644)
Q Consensus 578 ~~v~~e 583 (644)
....-+
T Consensus 299 ~~~~G~ 304 (324)
T 3hg7_A 299 RFIDGQ 304 (324)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 766533
No 168
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=80.79 E-value=1 Score=45.13 Aligned_cols=101 Identities=15% Similarity=0.145 Sum_probs=60.1
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc---hhh---hhhcc-ccCC
Q 006454 381 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ---HFK---KPWAH-EHEP 452 (644)
Q Consensus 381 ~L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~---~~k---~~fA~-~~~~ 452 (644)
+++..+|+|.|| |-.|-.|++.|++ .| .+++.++++.- ...+.+. ..+ ..+.. +..+
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~---~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGP---RSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSC---CCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC---CChhHHHHHHHHHhCCcEEEEeecCC
Confidence 355679999999 8888888887764 25 35888887520 0000011 000 00111 1122
Q ss_pred CCCHHHHHhccCCcEEEEccCCCCC-CCHHHHHHHHcCC-CCcEEE
Q 006454 453 VKELVDAVNAIKPTILIGTSGQGRT-FTKEVVEAMASLN-EKPIIF 496 (644)
Q Consensus 453 ~~~L~eaV~~vkPtvLIG~S~~~g~-Fteevv~~Ma~~~-erPIIF 496 (644)
..+|.++++..++|++|=+.+.... -+..+++++.+.. -+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 3468888987779999988775432 3788999998766 455654
No 169
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=80.76 E-value=1.5 Score=41.93 Aligned_cols=96 Identities=15% Similarity=0.166 Sum_probs=55.6
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHH
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 459 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 459 (644)
++-...||.|+|+|..|..+|..+.. .|. +++++|++- +.++ .++...-...++.++
T Consensus 24 ~~~~~~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~-------~~~~----~~~~~g~~~~~~~~~ 80 (215)
T 2vns_A 24 VPDEAPKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP-------KRTA----RLFPSAAQVTFQEEA 80 (215)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH-------HHHH----HHSBTTSEEEEHHHH
T ss_pred CCCCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH-------HHHH----HHHHcCCceecHHHH
Confidence 33345689999999999999998864 253 588888741 1111 111111111268888
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 006454 460 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 503 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts 503 (644)
++. +|++|=+.. +. ..+++++ ++...+.-+|.-+||+..
T Consensus 81 ~~~--~DvVi~av~-~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 81 VSS--PEVIFVAVF-RE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp TTS--CSEEEECSC-GG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred HhC--CCEEEECCC-hH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 874 898884333 32 3455554 333235668888999873
No 170
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=80.62 E-value=1.7 Score=46.52 Aligned_cols=95 Identities=18% Similarity=0.333 Sum_probs=49.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChh-hhcCeEEEEccCC-------cccCCCcc--CCchhhhhhccccCCCC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLE-ETRKKIWLVDSKG-------LIVSSRLE--SLQHFKKPWAHEHEPVK 454 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~e-eAr~~i~lvDs~G-------Li~~~R~~--~L~~~k~~fA~~~~~~~ 454 (644)
.||.|+|||+=|+.+|..+.+.-.. .+.- +-.=++|..|..= .|...|.+ -|+..+.| ..-....
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~---~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--~~i~~t~ 109 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKG---YPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--DNLVANP 109 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH---CTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--SSEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCC---ccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--CCcEEeC
Confidence 4999999999999999999875321 1000 0012467655430 12222211 12222211 0001124
Q ss_pred CHHHHHhccCCcEEE-EccCCCCCCCHHHHHHHHcC
Q 006454 455 ELVDAVNAIKPTILI-GTSGQGRTFTKEVVEAMASL 489 (644)
Q Consensus 455 ~L~eaV~~vkPtvLI-G~S~~~g~Fteevv~~Ma~~ 489 (644)
+|.|+++. .|++| .+.+ .|-.++++.+..+
T Consensus 110 dl~~al~~--ad~ii~avPs---~~~r~~l~~l~~~ 140 (391)
T 4fgw_A 110 DLIDSVKD--VDIIVFNIPH---QFLPRICSQLKGH 140 (391)
T ss_dssp CHHHHHTT--CSEEEECSCG---GGHHHHHHHHTTT
T ss_pred CHHHHHhc--CCEEEEECCh---hhhHHHHHHhccc
Confidence 78888876 56554 3333 4577777777654
No 171
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=80.34 E-value=13 Score=38.43 Aligned_cols=120 Identities=15% Similarity=0.137 Sum_probs=80.5
Q ss_pred CCCceeecCCcc---hHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 006454 351 TTHLVFNDDIQG---TASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 408 (644)
Q Consensus 351 ~~~~~FNDDiQG---TaaVvLAgll~Alr~-------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~ 408 (644)
..+.+.|---.. +|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~--- 166 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKG--- 166 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHH---
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHH---
Confidence 467777753333 344478888887651 3457899999999999999999998864
Q ss_pred HhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHH
Q 006454 409 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVE 484 (644)
Q Consensus 409 ~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~ 484 (644)
.|+ +++.+|+.. .. . .. .++. ..+|.|+++. .|+++=.-. ..+.|+++.++
T Consensus 167 --~G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 167 --FGA-------KVIAYDPYP----MK-G-DH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp --TTC-------EEEEECSSC----CS-S-CC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred --CCC-------EEEEECCCc----ch-h-hH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 264 588888752 11 1 11 1121 1378898886 898885422 23578899999
Q ss_pred HHHcCCCCcEEEecCCC
Q 006454 485 AMASLNEKPIIFSLSNP 501 (644)
Q Consensus 485 ~Ma~~~erPIIFaLSNP 501 (644)
.|. +.-++.=.|.-
T Consensus 222 ~mk---~ga~lIn~srg 235 (333)
T 1dxy_A 222 LMK---PGAIVINTARP 235 (333)
T ss_dssp HSC---TTEEEEECSCT
T ss_pred hCC---CCcEEEECCCC
Confidence 884 56677777653
No 172
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=80.29 E-value=1.7 Score=44.12 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=27.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
...||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 457999999999999999998753 53 58888863
No 173
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=80.17 E-value=2.3 Score=46.43 Aligned_cols=32 Identities=22% Similarity=0.435 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.||.|+|+|..|.|||..++.+ |. +++++|.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-----GI-------ETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECc
Confidence 6899999999999999988753 64 57788763
No 174
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=80.10 E-value=13 Score=38.66 Aligned_cols=96 Identities=15% Similarity=0.064 Sum_probs=62.7
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHH
Q 006454 379 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 458 (644)
Q Consensus 379 g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 458 (644)
|..|.+.+|.|+|.|..|..+|+.+... .|+ +++.+|+.. .+ ....+..-+. ...+|.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~----~~---~~~~~~~g~~---~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAP----AD---AETEKALGAE---RVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSC----CC---HHHHHHHTCE---ECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCC----cc---hhhHhhcCcE---EeCCHHH
Confidence 5679999999999999999999988522 263 688888742 11 1111100011 1247888
Q ss_pred HHhccCCcEEEEccC----CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 006454 459 AVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSN 500 (644)
Q Consensus 459 aV~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSN 500 (644)
+++. .|+++=.-- ..+.++++.++.|. +..+|.-.|.
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~sr 257 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTAR 257 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSC
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCC
Confidence 8886 898875421 23688888888883 5567766665
No 175
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=80.03 E-value=2.8 Score=43.91 Aligned_cols=107 Identities=15% Similarity=0.293 Sum_probs=64.1
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccc-cCCCCCHHHH
Q 006454 382 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDA 459 (644)
Q Consensus 382 L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~ea 459 (644)
+...||.++|| |..|..+|-.++. .|+ ...+.|+|.+-=..++-.-+|.+. .|... ..-..++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 34679999998 9999999865543 365 246999997410000000013322 22110 0012578889
Q ss_pred HhccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcE-EEecCCCC
Q 006454 460 VNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPI-IFSLSNPT 502 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPI-IFaLSNPt 502 (644)
++. .|++|=+.+.+ |- .-+++++.+.+++..-+ |+-.|||.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch
Confidence 986 89888554433 21 23467777888888885 88899997
No 176
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=79.95 E-value=1.5 Score=45.80 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=32.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 56688999999999999999999876 76 799999976
No 177
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=79.48 E-value=6.7 Score=41.89 Aligned_cols=166 Identities=11% Similarity=0.049 Sum_probs=90.4
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHH
Q 006454 379 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 458 (644)
Q Consensus 379 g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 458 (644)
+..|.+.++.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. ....+ .+ ......+|.|
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a-----~G~-------~V~~~d~~~----~~---~~~~~-~~--G~~~~~~l~e 243 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAP-----FDV-------HLHYTDRHR----LP---ESVEK-EL--NLTWHATRED 243 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----CC---HHHHH-HH--TCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHh-----CCC-------EEEEEcCCc----cc---hhhHh-hc--CceecCCHHH
Confidence 567999999999999999999998753 253 588888631 11 11111 11 0011247889
Q ss_pred HHhccCCcEEEEcc----CCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCC--Ccc
Q 006454 459 AVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFD--PFE 532 (644)
Q Consensus 459 aV~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~GraifASGSPF~--pV~ 532 (644)
+++. .|+++=.- ...++|+++.++.|. +.-+|.=.|.-.---|-.-.+|+ .+|+.--|.--=|. |..
T Consensus 244 ll~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~gA~lDV~~~EP~~ 316 (393)
T 2nac_A 244 MYPV--CDVVTLNCPLHPETEHMINDETLKLFK---RGAYIVNTARGKLCDRDAVARAL--ESGRLAGYAGDVWFPQPAP 316 (393)
T ss_dssp HGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC---TTEEEEECSCGGGBCHHHHHHHH--HTTSEEEEEESCCSSSSCC
T ss_pred HHhc--CCEEEEecCCchHHHHHhhHHHHhhCC---CCCEEEECCCchHhhHHHHHHHH--HcCCeeEEEEEecCCCCCC
Confidence 8886 89887542 224688888888884 56677777752211221222333 34553333211111 110
Q ss_pred cCCeeecccCCCccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 006454 533 YGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 581 (644)
Q Consensus 533 ~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 581 (644)
....+ =+..|+.+-|=++-...-+ ...|...+++-|.....
T Consensus 317 -~~~pL--~~~~nvilTPHia~~T~e~-----~~~~~~~~~~nl~~~~~ 357 (393)
T 2nac_A 317 -KDHPW--RTMPYNGMTPHISGTTLTA-----QARYAAGTREILECFFE 357 (393)
T ss_dssp -TTCGG--GTSTTBCCCCSCTTCSHHH-----HHHHHHHHHHHHHHHHH
T ss_pred -CCChh--HcCCCEEECCCCCcCcHHH-----HHHHHHHHHHHHHHHHc
Confidence 01100 1355888888776422221 23344555555555543
No 178
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=79.36 E-value=19 Score=38.41 Aligned_cols=120 Identities=18% Similarity=0.209 Sum_probs=82.1
Q ss_pred cCCCceeecCC---cchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 006454 350 GTTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 408 (644)
Q Consensus 350 r~~~~~FNDDi---QGTaaVvLAgll~Alr~------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~ 408 (644)
+..++|||--- +.+|=-++|.+|+..|- .|..|.+.++.|+|-|..|..+|+.+...
T Consensus 90 ~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~-- 167 (404)
T 1sc6_A 90 KRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL-- 167 (404)
T ss_dssp HTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC--
Confidence 35678887543 34555688899988773 25679999999999999999999988642
Q ss_pred HhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHH
Q 006454 409 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVE 484 (644)
Q Consensus 409 ~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~ 484 (644)
|+ +++.+|+..- ..+. -+ ....+|.|+++. .|+++=.- ...+.|+++.++
T Consensus 168 ---G~-------~V~~~d~~~~------~~~~-----~~---~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 221 (404)
T 1sc6_A 168 ---GM-------YVYFYDIENK------LPLG-----NA---TQVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEIS 221 (404)
T ss_dssp ---TC-------EEEEECSSCC------CCCT-----TC---EECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHH
T ss_pred ---CC-------EEEEEcCCch------hccC-----Cc---eecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHh
Confidence 64 5888887421 1010 01 112478888886 88887542 223578888888
Q ss_pred HHHcCCCCcEEEecCC
Q 006454 485 AMASLNEKPIIFSLSN 500 (644)
Q Consensus 485 ~Ma~~~erPIIFaLSN 500 (644)
.|. +.-++.=.|.
T Consensus 222 ~mk---~ga~lIN~aR 234 (404)
T 1sc6_A 222 LMK---PGSLLINASR 234 (404)
T ss_dssp HSC---TTEEEEECSC
T ss_pred hcC---CCeEEEECCC
Confidence 884 5667777775
No 179
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=79.27 E-value=2.7 Score=41.33 Aligned_cols=96 Identities=16% Similarity=0.135 Sum_probs=56.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhcc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 463 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 463 (644)
-.||.|+|+|..|..+|..+... |. ..+++++|++. +.++..++.-..+ ....++.|+++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~-------~~~~~~~~~g~~~-~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD-------RSRDIALERGIVD-EATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH-------HHHHHHHHTTSCS-EEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH-------HHHHHHHHcCCcc-cccCCHHHhhcC-
Confidence 36899999999999999988653 32 14688888741 1111111100000 012355566664
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC--CCCcEEEecCCC
Q 006454 464 KPTILIGTSGQGRTFTKEVVEAMASL--NEKPIIFSLSNP 501 (644)
Q Consensus 464 kPtvLIG~S~~~g~Fteevv~~Ma~~--~erPIIFaLSNP 501 (644)
+|++| ++..+... +++++.+... .+..||.-+||-
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGST 103 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSC
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCC
Confidence 78777 44434333 7888888764 455677766763
No 180
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=79.08 E-value=1.6 Score=44.36 Aligned_cols=98 Identities=18% Similarity=0.246 Sum_probs=57.0
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc
Q 006454 369 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 448 (644)
Q Consensus 369 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 448 (644)
.|++.+++..| +.|++|+|||.+|.+|+..|... | .+|+++++. .+|.+.|. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 35666665433 78999999999999988887653 4 579988884 33322122 1110
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC----CCCCHHHHH-HHHcCCCCcEEEecC
Q 006454 449 EHEPVKELVDAVNAIKPTILIGTSGQG----RTFTKEVVE-AMASLNEKPIIFSLS 499 (644)
Q Consensus 449 ~~~~~~~L~eaV~~vkPtvLIG~S~~~----g~Fteevv~-~Ma~~~erPIIFaLS 499 (644)
......+| . ++|++|-++..| -.+.++.+. .+. +..+++=++
T Consensus 163 ~~~~~~~l----~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~v 209 (269)
T 3phh_A 163 DCFMEPPK----S--AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLA 209 (269)
T ss_dssp EEESSCCS----S--CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESC
T ss_pred eEecHHHh----c--cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeC
Confidence 10111222 1 699999776654 146777555 343 355776554
No 181
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=78.95 E-value=4.1 Score=44.10 Aligned_cols=98 Identities=13% Similarity=0.156 Sum_probs=59.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhh-hhc-cccCCCCCHHHHHhc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWA-HEHEPVKELVDAVNA 462 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~-~fA-~~~~~~~~L~eaV~~ 462 (644)
.||.|+|+|..|..+|..|... |. +++++|+. . +.++..++ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~----~---~~~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----V---SKVDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----T---HHHHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCC----H---HHHHHHHhccccCCCeEEeCCHHHHHhh
Confidence 4799999999999999988652 53 58888863 1 11222211 000 000113578888863
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 006454 463 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 502 (644)
Q Consensus 463 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 502 (644)
+ +||++| ++...+...+++++.+...- +.-||.-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 588777 44434345778887776543 356788888854
No 182
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=78.78 E-value=3.5 Score=42.54 Aligned_cols=191 Identities=12% Similarity=0.097 Sum_probs=109.6
Q ss_pred CCCceeecCC----cchHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHh
Q 006454 351 TTHLVFNDDI----QGTASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 410 (644)
Q Consensus 351 ~~~~~FNDDi----QGTaaVvLAgll~Alr~----------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~ 410 (644)
..+++.|--- +..|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~----- 160 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQA----- 160 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHT-----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHH-----
Confidence 4566665321 34566778888888763 2567899999999999999999998864
Q ss_pred cCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHH
Q 006454 411 TNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAM 486 (644)
Q Consensus 411 ~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~M 486 (644)
.|+ +++.+|+..- ..+... .+. ...+|.|+++. .|+++=.- ..-+.|+++.++.|
T Consensus 161 ~G~-------~V~~~dr~~~-------~~~~~~-~~~----~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 161 WGF-------PLRCWSRSRK-------SWPGVE-SYV----GREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp TTC-------CEEEEESSCC-------CCTTCE-EEE----SHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred CCC-------EEEEEcCCch-------hhhhhh-hhc----ccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhC
Confidence 264 5788887421 111111 110 11468888885 88887431 23468888888888
Q ss_pred HcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCccc-CCeeecccCCCccccchhhhHHHHHhCCcccC
Q 006454 487 ASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVH 565 (644)
Q Consensus 487 a~~~erPIIFaLSNPts~aEct~edA~~wT~GraifASGSPF~pV~~-~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~It 565 (644)
. +..++.=.|.-..--|---.+|++ .|+.-.|.=-=|++--. .+.. -=+..|+.+-|=++- .+. .
T Consensus 220 k---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~~~p--L~~~~nvilTPHia~------~t~-~ 285 (315)
T 3pp8_A 220 P---DGAYVLNLARGVHVQEADLLAALD--SGKLKGAMLDVFSQEPLPQESP--LWRHPRVAMTPHIAA------VTR-P 285 (315)
T ss_dssp C---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTTCG--GGGCTTEEECSSCSS------CCC-H
T ss_pred C---CCCEEEECCCChhhhHHHHHHHHH--hCCccEEEcCCCCCCCCCCCCh--hhcCCCEEECCCCCc------ccH-H
Confidence 4 567777776633222222233333 45543332111111000 0000 113467788887652 222 2
Q ss_pred HHHHHHHHHHHHcccC
Q 006454 566 DDMLLAAAEALAGQVT 581 (644)
Q Consensus 566 d~M~laAA~aLA~~v~ 581 (644)
+.|...+++-|.....
T Consensus 286 ~~~~~~~~~ni~~~~~ 301 (315)
T 3pp8_A 286 AEAIDYISRTITQLEK 301 (315)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc
Confidence 5677777777766654
No 183
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=78.77 E-value=2.7 Score=41.63 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 5899999999999999988753 5 367888874
No 184
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=78.76 E-value=2.4 Score=43.76 Aligned_cols=108 Identities=10% Similarity=0.162 Sum_probs=60.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhh-----hhccc------cCCC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-----PWAHE------HEPV 453 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~-----~fA~~------~~~~ 453 (644)
.||.|+|+|..|..+|..|...-... . .-..+++++|+..-+. .+. ..+..++ .|-.. ....
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~----~-~~~~~V~~~~r~~~~~-~~~-~~~~l~~~~~~~~~~~~~~~~~~i~~~ 94 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNN----Y-LFENEVRMWIRDEFVN-GER-MVDIINNKHENTKYLKGVPLPHNIVAH 94 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHC----T-TBCSCEEEECCSCC----CC-HHHHHHHHCBCTTTSTTCBCCTTEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCcc----C-CCCCeEEEEECChhhh-hHH-HHHHHHhcCcccccCCcccCcCCeEEE
Confidence 48999999999999999998652110 0 0014688888753210 000 0111110 00000 0012
Q ss_pred CCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHc----C-CCCcEEEecCCCCC
Q 006454 454 KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMAS----L-NEKPIIFSLSNPTS 503 (644)
Q Consensus 454 ~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~----~-~erPIIFaLSNPts 503 (644)
.++.|+++. .|++|= +-.. ...+++++.++. . .+..+|..++|-.+
T Consensus 95 ~~~~ea~~~--aDvVil-av~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 95 SDLASVIND--ADLLIF-IVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp SSTHHHHTT--CSEEEE-CCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred CCHHHHHcC--CCEEEE-cCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 467788875 787662 2222 467888888865 3 34568888998654
No 185
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=78.48 E-value=4.7 Score=44.17 Aligned_cols=98 Identities=14% Similarity=0.204 Sum_probs=62.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcccc--CCCCCHHHHHhc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVNA 462 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~eaV~~ 462 (644)
.+|.|+|+|..|..+|..|... |. +++++|+. . +..+.....-+... ....++.|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~----~---~~~~~l~~~g~~g~~i~~~~s~~e~v~~ 65 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----V---SKVDDFLANEAKGTKVVGAQSLKEMVSK 65 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----T---HHHHHHHHTTTTTSSCEECSSHHHHHHT
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCC----H---HHHHHHHhcccCCCceeccCCHHHHHhh
Confidence 5899999999999999988753 63 58888873 1 11222221111110 113688898875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCC
Q 006454 463 I-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 502 (644)
Q Consensus 463 v-kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 502 (644)
+ +||++| ++-..+.-++++++.+..+ .+..||.-.||-.
T Consensus 66 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 66 LKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp BCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 4 588776 3333444567788877654 4567888888844
No 186
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=78.46 E-value=8 Score=40.21 Aligned_cols=120 Identities=13% Similarity=0.070 Sum_probs=78.3
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHH
Q 006454 351 TTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 409 (644)
Q Consensus 351 ~~~~~FNDDi---QGTaaVvLAgll~Alr~------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~ 409 (644)
..++|.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 111 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~---- 186 (335)
T 2g76_A 111 KGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQS---- 186 (335)
T ss_dssp HTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHT----
T ss_pred CCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHH----
Confidence 3566666432 23445577888887664 2567999999999999999999998853
Q ss_pred hcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccc-cCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHH
Q 006454 410 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVE 484 (644)
Q Consensus 410 ~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~ 484 (644)
.|+ +++.+|+.. . .. .+.. .-...+|.|+++. .|+++=.-. ..+.|+++.++
T Consensus 187 -~G~-------~V~~~d~~~----~------~~---~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 243 (335)
T 2g76_A 187 -FGM-------KTIGYDPII----S------PE---VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFA 243 (335)
T ss_dssp -TTC-------EEEEECSSS----C------HH---HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHT
T ss_pred -CCC-------EEEEECCCc----c------hh---hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHh
Confidence 253 588888641 1 10 1111 1112478898886 898885421 23578888888
Q ss_pred HHHcCCCCcEEEecCC
Q 006454 485 AMASLNEKPIIFSLSN 500 (644)
Q Consensus 485 ~Ma~~~erPIIFaLSN 500 (644)
.|. +..++.=.|.
T Consensus 244 ~mk---~gailIN~ar 256 (335)
T 2g76_A 244 QCK---KGVRVVNCAR 256 (335)
T ss_dssp TSC---TTEEEEECSC
T ss_pred hCC---CCcEEEECCC
Confidence 774 5678777776
No 187
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=78.37 E-value=3.3 Score=39.92 Aligned_cols=76 Identities=17% Similarity=0.265 Sum_probs=45.8
Q ss_pred CCCCceEEEeCc-Ch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc----------
Q 006454 381 SLADQRFLFLGA-GE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH---------- 448 (644)
Q Consensus 381 ~L~d~riv~~GA-Gs-AG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~---------- 448 (644)
.++++++||.|| |+ .|..+|+.+++ .| -+++++|++- +.+...+..+..
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~ 79 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EG-------ADVVISDYHE-------RRLGETRDQLADLGLGRVEAVV 79 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TT-------CEEEEEESCH-------HHHHHHHHHHHTTCSSCEEEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CC-------CEEEEecCCH-------HHHHHHHHHHHhcCCCceEEEE
Confidence 478899999999 74 77778777764 35 3588888741 112222222211
Q ss_pred -ccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 449 -EHEPVKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 449 -~~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
|..+..++.++++.+ +.|+||=..+..
T Consensus 80 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 80 CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred eCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcC
Confidence 111223455666655 799999877754
No 188
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=78.31 E-value=3 Score=41.72 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=25.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.||.|+|+|..|..+|..+.. .|. +++++|+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-----MGH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 689999999999999998864 253 58888864
No 189
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=78.19 E-value=4.3 Score=34.63 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=25.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 3589999999999999888764 24 468889874
No 190
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=78.04 E-value=3.5 Score=37.75 Aligned_cols=37 Identities=22% Similarity=0.320 Sum_probs=28.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
++.+.+|+|+|+|..|..+|+.|... .| .+++++|++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 35677999999999999999988542 04 358888874
No 191
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=78.01 E-value=5.7 Score=39.47 Aligned_cols=103 Identities=16% Similarity=0.172 Sum_probs=61.2
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCc---cCCchhhhhhcc-ccCCCC
Q 006454 380 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRL---ESLQHFKKPWAH-EHEPVK 454 (644)
Q Consensus 380 ~~L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~---~~L~~~k~~fA~-~~~~~~ 454 (644)
.+++..+|+|.|| |-.|..+++.|++ .| .+++++|+.. .... +.+. ...+.. +..+..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFA---TGKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCS---SSCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhhhccC--CceEEEeeCCCHH
Confidence 4577889999998 7777777776653 25 3688888741 1110 1110 111111 212223
Q ss_pred CHHHHHhccCCcEEEEccCCCCC--C-----------CHHHHHHHHcCCCCcEEEecC
Q 006454 455 ELVDAVNAIKPTILIGTSGQGRT--F-----------TKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 455 ~L~eaV~~vkPtvLIG~S~~~g~--F-----------teevv~~Ma~~~erPIIFaLS 499 (644)
++.++++.+++|++|=+.+.... . +..+++++.+..-+.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 57778876689999988876532 0 345677776655567888544
No 192
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=78.01 E-value=2.1 Score=42.58 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999998753 53 68888874
No 193
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=77.98 E-value=13 Score=37.92 Aligned_cols=176 Identities=13% Similarity=0.100 Sum_probs=103.7
Q ss_pred hHHHHHHHHHHHHHHh----------------CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 006454 363 TASVVLAGLISAMKFL----------------GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 426 (644)
Q Consensus 363 TaaVvLAgll~Alr~~----------------g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvD 426 (644)
+|=-+++-+|+..|-. ...|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 152 (290)
T 3gvx_A 85 VAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYT 152 (290)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEe
Confidence 4445666666665521 1458899999999999999999998753 64 688888
Q ss_pred cCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 427 SKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 427 s~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
+.. .. ... +. ...+|.|+++. .|+++=.- ...+.++++.++.|. +..+|.=.|.-.
T Consensus 153 r~~----~~---~~~-----~~---~~~~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG~ 212 (290)
T 3gvx_A 153 RSS----VD---QNV-----DV---ISESPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARAD 212 (290)
T ss_dssp SSC----CC---TTC-----SE---ECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCGG
T ss_pred ccc----cc---ccc-----cc---ccCChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehhc
Confidence 752 11 111 11 23579999986 88877432 224678888888884 667888777533
Q ss_pred CCCCCCHHHHhcccCCcEEEeeCCCC--CCcccCCeeecccCCCccccchhhhHHHHHhCCcccCHHHHHHHHHHHHccc
Q 006454 503 SQSECTAEEAYTWSQGRAIFASGSPF--DPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQV 580 (644)
Q Consensus 503 s~aEct~edA~~wT~GraifASGSPF--~pV~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v 580 (644)
.--|---.+|++ +|+.-.|.=--| +|. ..-=+..|+.+-|=++=| ....-.+.|...+++-|....
T Consensus 213 ~vd~~aL~~aL~--~g~i~ga~lDV~~~EP~------~pL~~~~nvilTPHiag~----~t~e~~~~~~~~~~~ni~~~~ 280 (290)
T 3gvx_A 213 VVSKPDMIGFLK--ERSDVWYLSDVWWNEPE------ITETNLRNAILSPHVAGG----MSGEIMDIAIQLAFENVRNFF 280 (290)
T ss_dssp GBCHHHHHHHHH--HCTTCEEEESCCTTTTS------CCSCCCSSEEECCSCSSC----BTTBCCHHHHHHHHHHHHHHT
T ss_pred ccCCcchhhhhh--hccceEEeeccccCCcc------cchhhhhhhhcCccccCC----ccchHHHHHHHHHHHHHHhhh
Confidence 212222223333 343322211111 111 111245688888876511 223456778888888887766
Q ss_pred Cc
Q 006454 581 TQ 582 (644)
Q Consensus 581 ~~ 582 (644)
.-
T Consensus 281 ~~ 282 (290)
T 3gvx_A 281 EG 282 (290)
T ss_dssp C-
T ss_pred cC
Confidence 53
No 194
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=77.86 E-value=5.3 Score=42.98 Aligned_cols=71 Identities=25% Similarity=0.379 Sum_probs=47.7
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhc
Q 006454 384 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 462 (644)
Q Consensus 384 d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 462 (644)
--|++++|+ |-+|.|-++.+.. .|.. ..++...|.+= ..+.. +| +.++
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~-----lGa~----~~~V~v~D~~~---~~~g~-------~~-----------~~i~- 262 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHK-----VGIP----DANILKWDIKE---TSRGG-------PF-----------DEIP- 262 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHH-----TTCC----GGGEEEECHHH---HTTCS-------CC-----------THHH-
T ss_pred CCeEEEEcCCCHHHHHHHHHHHh-----CCCC----cCceEEeeccc---cccCC-------ch-----------hhHh-
Confidence 468999999 9999999988864 2641 12566666641 01100 01 2344
Q ss_pred cCCcEEEEccCC----CCCCCHHHHHHH
Q 006454 463 IKPTILIGTSGQ----GRTFTKEVVEAM 486 (644)
Q Consensus 463 vkPtvLIG~S~~----~g~Fteevv~~M 486 (644)
..|++||+--. |-++|+|+|+.|
T Consensus 263 -~aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 263 -QADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp -HSSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred -hCCEEEECcCcCCCCCcccCHHHHhcC
Confidence 38999998765 568999999988
No 195
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=77.76 E-value=4.9 Score=41.04 Aligned_cols=93 Identities=18% Similarity=0.244 Sum_probs=51.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHH-HHhcc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD-AVNAI 463 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e-aV~~v 463 (644)
.||.|+|+|..|..+|..+... |. ..+++++|++- +.++..++.-+. .....++.| +++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~~-------~~~~~a~~~G~~-~~~~~~~~~~~~~~- 94 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDINP-------ESISKAVDLGII-DEGTTSIAKVEDFS- 94 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCH-------HHHHHHHHTTSC-SEEESCTTGGGGGC-
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECCH-------HHHHHHHHCCCc-chhcCCHHHHhhcc-
Confidence 7999999999999999988753 64 14789888741 111111100000 001134555 5554
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEecC
Q 006454 464 KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLS 499 (644)
Q Consensus 464 kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLS 499 (644)
+|++| ++.... -.+++++.+... .+.-||.-.+
T Consensus 95 -aDvVi-lavp~~-~~~~vl~~l~~~l~~~~iv~d~~ 128 (314)
T 3ggo_A 95 -PDFVM-LSSPVR-TFREIAKKLSYILSEDATVTDQG 128 (314)
T ss_dssp -CSEEE-ECSCGG-GHHHHHHHHHHHSCTTCEEEECC
T ss_pred -CCEEE-EeCCHH-HHHHHHHHHhhccCCCcEEEECC
Confidence 67666 444332 345666666542 3444555443
No 196
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=77.70 E-value=3 Score=42.00 Aligned_cols=36 Identities=14% Similarity=0.238 Sum_probs=28.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+...||.|+|+|..|.++|..|... |. +++++|+.
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 34567999999999999999998753 53 57777764
No 197
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=77.56 E-value=1.5 Score=42.56 Aligned_cols=97 Identities=13% Similarity=0.203 Sum_probs=56.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhc
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 462 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 462 (644)
+..||+|.|||-.|..+++.|++ .| .+++.++++. +.+.+.-..+.-+..+..++.++++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~-----~g-------~~V~~~~r~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~~ 62 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTA-----QG-------HEVTGLRRSA-------QPMPAGVQTLIADVTRPDTLASIVHL 62 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECTT-------SCCCTTCCEEECCTTCGGGCTTGGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCc-------cccccCCceEEccCCChHHHHHhhcC
Confidence 34689999999888888887765 25 3577777641 11211111111122222345556654
Q ss_pred cCCcEEEEccCCCC-----------CCCHHHHHHHHcCCCCcEEEecC
Q 006454 463 IKPTILIGTSGQGR-----------TFTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 463 vkPtvLIG~S~~~g-----------~Fteevv~~Ma~~~erPIIFaLS 499 (644)
++|++|=+.+... ..|..+++++.+..-+-+||.=|
T Consensus 63 -~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 63 -RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp -CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred -CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 6999997664321 12567788877655567887544
No 198
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=77.35 E-value=1.7 Score=44.35 Aligned_cols=35 Identities=20% Similarity=0.458 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
..||||+|+|.||+..|..|.+. |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 46899999999999999988653 31 1368888875
No 199
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=77.28 E-value=2.4 Score=42.75 Aligned_cols=36 Identities=17% Similarity=0.201 Sum_probs=28.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+.+-.||.|+|+|..|..+|..|... |. +++++|+.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 33446999999999999999998753 53 68888874
No 200
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=77.20 E-value=9.5 Score=39.98 Aligned_cols=189 Identities=15% Similarity=0.125 Sum_probs=111.9
Q ss_pred CCCceeecC--CcchHHHHHHHHHHHHHH----------------------------hCCCCCCceEEEeCcChHHHHHH
Q 006454 351 TTHLVFNDD--IQGTASVVLAGLISAMKF----------------------------LGGSLADQRFLFLGAGEAGTGIA 400 (644)
Q Consensus 351 ~~~~~FNDD--iQGTaaVvLAgll~Alr~----------------------------~g~~L~d~riv~~GAGsAG~GIA 400 (644)
..++|.|.- -..+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|
T Consensus 97 ~gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA 176 (352)
T 3gg9_A 97 KGVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVA 176 (352)
T ss_dssp HTCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHH
T ss_pred CCeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHH
Confidence 356666521 224455677777777663 24678899999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEcc----CCCC
Q 006454 401 ELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGR 476 (644)
Q Consensus 401 ~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g 476 (644)
+.+... |+ +++.+|+.. .. + ..... ......+|.|+++. .|+++=.- ...+
T Consensus 177 ~~l~~~-----G~-------~V~~~d~~~----~~-~---~~~~~---g~~~~~~l~ell~~--aDiV~l~~Plt~~t~~ 231 (352)
T 3gg9_A 177 GYGRAF-----GM-------NVLVWGREN----SK-E---RARAD---GFAVAESKDALFEQ--SDVLSVHLRLNDETRS 231 (352)
T ss_dssp HHHHHT-----TC-------EEEEECSHH----HH-H---HHHHT---TCEECSSHHHHHHH--CSEEEECCCCSTTTTT
T ss_pred HHHHhC-----CC-------EEEEECCCC----CH-H---HHHhc---CceEeCCHHHHHhh--CCEEEEeccCcHHHHH
Confidence 988642 64 588888741 00 0 00000 01123589999987 89887532 2346
Q ss_pred CCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEE------EeeCCCCCCcccCCeeecccCCCccccch
Q 006454 477 TFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAI------FASGSPFDPFEYGDNVFVPGQANNAYIFP 550 (644)
Q Consensus 477 ~Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~Grai------fASGSPF~pV~~~Gk~~~p~Q~NN~yiFP 550 (644)
.|+++.++.|. +..++.=.|.-..--|---.+|++ +|+.- |.. -|.++ .. .-=+..|+.+-|
T Consensus 232 li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~-EPl~~----~~--pL~~~~nvilTP 299 (352)
T 3gg9_A 232 IITVADLTRMK---PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFET-EPILQ----GH--TLLRMENCICTP 299 (352)
T ss_dssp CBCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSS-SCCCS----CC--GGGGCTTEEECC
T ss_pred hhCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCC-CCCCC----CC--hhhcCCCEEECC
Confidence 88999998884 677888888744334444445554 34432 222 12211 00 011346888888
Q ss_pred hhhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 006454 551 GLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 581 (644)
Q Consensus 551 GiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 581 (644)
=+|-.. ..-.+.|...+++-|.....
T Consensus 300 Hia~~t-----~e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 300 HIGYVE-----RESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp SCTTCB-----HHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCC-----HHHHHHHHHHHHHHHHHHHc
Confidence 775211 11224566667777766654
No 201
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=77.04 E-value=8.6 Score=38.22 Aligned_cols=104 Identities=17% Similarity=0.244 Sum_probs=59.5
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh-hhhhcc-ccCCCCCHH
Q 006454 381 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-KKPWAH-EHEPVKELV 457 (644)
Q Consensus 381 ~L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~-k~~fA~-~~~~~~~L~ 457 (644)
.++..+|+|.|| |-.|..+++.|++ .| .+++++|+.. ....+.+... +..+.. +..+..++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355678999985 7777777777654 25 4688888751 1111112111 111111 222224577
Q ss_pred HHHhccCCcEEEEccCCCCC-------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 458 DAVNAIKPTILIGTSGQGRT-------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 458 eaV~~vkPtvLIG~S~~~g~-------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
++++..++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 88887789999988776532 0345777777665568888543
No 202
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=76.98 E-value=2.5 Score=36.97 Aligned_cols=34 Identities=24% Similarity=0.509 Sum_probs=26.7
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+..+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~-----~g-------~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA-----AG-------KKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEECC
Confidence 34689999999999999998865 25 368888874
No 203
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=76.84 E-value=1.8 Score=45.35 Aligned_cols=120 Identities=20% Similarity=0.215 Sum_probs=66.1
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc-c--ccCCCCCHHHH
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-H--EHEPVKELVDA 459 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-~--~~~~~~~L~ea 459 (644)
.+.||+|+|||.+|-.+|+.|++. .++.++|+. .++ ++.....+. . +..+..+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 357999999999999998887531 358888873 111 222222221 0 11223568888
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCc
Q 006454 460 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPF 531 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~GraifASGSPF~pV 531 (644)
++. +|++|=+.. . .+..+++++-.+. .=.++-+|.-....+.-.++|.+ .|. .+..|+=|+|-
T Consensus 75 l~~--~DvVIn~~P-~-~~~~~v~~a~l~~--G~~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGALP-G-FLGFKSIKAAIKS--KVDMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECCC-H-HHHHHHHHHHHHT--TCCEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HhC--CCEEEECCC-h-hhhHHHHHHHHHh--CCeEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 885 899997632 2 3566776654332 22356677622112222344443 343 33455556664
No 204
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=76.18 E-value=2.1 Score=38.27 Aligned_cols=34 Identities=6% Similarity=0.137 Sum_probs=27.3
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
...+|+|+|+|..|..+|+.|.. .| .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~-----~g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQ-----RG-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 45789999999999999998864 24 468889884
No 205
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=76.13 E-value=21 Score=36.76 Aligned_cols=123 Identities=14% Similarity=0.118 Sum_probs=81.7
Q ss_pred cCCCceeecCCcc---hHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 006454 350 GTTHLVFNDDIQG---TASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 408 (644)
Q Consensus 350 r~~~~~FNDDiQG---TaaVvLAgll~Alr~------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~ 408 (644)
+..+.+.|----. +|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 91 ~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~--- 167 (333)
T 1j4a_A 91 ELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEG--- 167 (333)
T ss_dssp HTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHH---
T ss_pred hCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHH---
Confidence 3467777753333 344478888888762 2346888999999999999999998864
Q ss_pred HhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHH
Q 006454 409 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVE 484 (644)
Q Consensus 409 ~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~ 484 (644)
.|+ +++.+|+.. . . . .+ .++. ...+|.|+++. .|+++=.-. ..+.++++.++
T Consensus 168 --~G~-------~V~~~d~~~----~--~-~--~~-~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 168 --FGA-------KVITYDIFR----N--P-E--LE-KKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp --TTC-------EEEEECSSC----C--H-H--HH-HTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHH
T ss_pred --CCC-------EEEEECCCc----c--h-h--HH-hhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHh
Confidence 264 588888742 1 1 1 11 1221 12378898886 888885422 23578888888
Q ss_pred HHHcCCCCcEEEecCCCC
Q 006454 485 AMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 485 ~Ma~~~erPIIFaLSNPt 502 (644)
.|. +..++.-.|.-.
T Consensus 224 ~mk---~ga~lIn~arg~ 238 (333)
T 1j4a_A 224 KMK---QDVVIVNVSRGP 238 (333)
T ss_dssp HSC---TTEEEEECSCGG
T ss_pred hCC---CCcEEEECCCCc
Confidence 884 566887777633
No 206
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=76.10 E-value=2.8 Score=41.37 Aligned_cols=32 Identities=19% Similarity=0.331 Sum_probs=25.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.||.|+|+|..|..+|..+.. .|. +++++|+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-----EGV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 589999999999999988864 253 57888863
No 207
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=75.67 E-value=16 Score=37.89 Aligned_cols=80 Identities=19% Similarity=0.379 Sum_probs=44.9
Q ss_pred HHHHHHhC-CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccc-
Q 006454 372 ISAMKFLG-GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE- 449 (644)
Q Consensus 372 l~Alr~~g-~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~- 449 (644)
+.|+...+ ..-..++|+|+|||..|...+.+.. ..|. ++++.+|+. +.+..+|+.
T Consensus 201 ~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~~------------~~~~~~~~~l 257 (404)
T 3ip1_A 201 YNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILK-----HAGA------SKVILSEPS------------EVRRNLAKEL 257 (404)
T ss_dssp HHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEECSC------------HHHHHHHHHH
T ss_pred HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECCC------------HHHHHHHHHc
Confidence 34443333 3445789999999877765544443 2464 578888753 122233321
Q ss_pred ------cCCCCCHHHHHhc----cCCcEEEEccCC
Q 006454 450 ------HEPVKELVDAVNA----IKPTILIGTSGQ 474 (644)
Q Consensus 450 ------~~~~~~L~eaV~~----vkPtvLIG~S~~ 474 (644)
.....++.+.|+. -+.|+.|-+++.
T Consensus 258 Ga~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 258 GADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp TCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred CCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 0112356555554 368898877764
No 208
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=75.67 E-value=2.8 Score=39.08 Aligned_cols=93 Identities=15% Similarity=0.132 Sum_probs=54.5
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCcc-CCchhh-----hhhcc-ccCCCCCH
Q 006454 385 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE-SLQHFK-----KPWAH-EHEPVKEL 456 (644)
Q Consensus 385 ~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~-~L~~~k-----~~fA~-~~~~~~~L 456 (644)
++|+|.|| |-.|..+++.|++. .| -++++++++. + .++... ..+.. +..+..++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~d~~~~ 67 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TD-------MHITLYGRQL-------KTRIPPEIIDHERVTVIEGSFQNPGXL 67 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CC-------CEEEEEESSH-------HHHSCHHHHTSTTEEEEECCTTCHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CC-------ceEEEEecCc-------cccchhhccCCCceEEEECCCCCHHHH
Confidence 45999996 77777777777621 35 3688887741 1 122210 01111 22222467
Q ss_pred HHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEe
Q 006454 457 VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFS 497 (644)
Q Consensus 457 ~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFa 497 (644)
.++++. .|++|=+.+..+.-++.+++.|.+..-+-|||.
T Consensus 68 ~~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~i 106 (221)
T 3r6d_A 68 EQAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGV 106 (221)
T ss_dssp HHHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEE
Confidence 778874 899997776543227788888876554556654
No 209
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=75.64 E-value=4.4 Score=38.16 Aligned_cols=97 Identities=12% Similarity=0.111 Sum_probs=55.5
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhh----hhcc-ccCCC
Q 006454 380 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----PWAH-EHEPV 453 (644)
Q Consensus 380 ~~L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~----~fA~-~~~~~ 453 (644)
.+|++.+|+|.|| |-.|..+++.|++ .| -++++++++. + .+...+. .+.. +..
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~----~---~~~~~~~~~~~~~~~~Dl~-- 75 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE----E---QGPELRERGASDIVVANLE-- 75 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG----G---GHHHHHHTTCSEEEECCTT--
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh----H---HHHHHHhCCCceEEEcccH--
Confidence 4578899999998 7788888877764 25 3688888741 1 1221111 1111 111
Q ss_pred CCHHHHHhccCCcEEEEccCCCCC------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 454 KELVDAVNAIKPTILIGTSGQGRT------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 454 ~~L~eaV~~vkPtvLIG~S~~~g~------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
.++.++++ ++|++|=+.+.... -+..+++++.+..-+-|||.=|
T Consensus 76 ~~~~~~~~--~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 76 EDFSHAFA--SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp SCCGGGGT--TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHc--CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 45666666 59999977775421 0345667776555556666444
No 210
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=75.62 E-value=2.4 Score=41.92 Aligned_cols=32 Identities=19% Similarity=0.270 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 3799999999999999998764 5 357888874
No 211
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=75.41 E-value=3.2 Score=42.69 Aligned_cols=104 Identities=21% Similarity=0.264 Sum_probs=64.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCC--CCHHHHHhcc
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAI 463 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~eaV~~v 463 (644)
||.|+|||..|..+|-+|+.. |+ -..+.|+|..-=..++-.-+|.+-. +|....... .+-.++++.
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~~-~~~~~~~~i~~~~d~~~~~~- 69 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAA-AGIDKYPKIVGGADYSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHH-GGGTCCCEEEEESCGGGGTT-
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhccc-ccCCCCCeEecCCCHHHhCC-
Confidence 799999999999988887642 54 2569999975211111111233321 222111110 122245665
Q ss_pred CCcEEEEccCCCCC--CC------------HHHHHHHHcCCCCcEEEecCCCC
Q 006454 464 KPTILIGTSGQGRT--FT------------KEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 464 kPtvLIG~S~~~g~--Ft------------eevv~~Ma~~~erPIIFaLSNPt 502 (644)
.|+.|=+.+.+.. -| +++++++++++...||.-.|||.
T Consensus 70 -aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv 121 (294)
T 2x0j_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 8999866665532 12 46788888999999999999997
No 212
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=75.08 E-value=5.5 Score=40.30 Aligned_cols=93 Identities=18% Similarity=0.239 Sum_probs=50.5
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc
Q 006454 361 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 440 (644)
Q Consensus 361 QGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~ 440 (644)
++.....++..+.+++....- ..++++|+|||..|...+.+... .|. ++++.+|+. ..| ++
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~ 203 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---LA 203 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HG
T ss_pred HHHhhhHHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HH
Confidence 333333444445666623333 88999999998777766655432 363 468888863 111 11
Q ss_pred hhhhhhccc--cCCCCCHHHHHhcc---CCcEEEEccC
Q 006454 441 HFKKPWAHE--HEPVKELVDAVNAI---KPTILIGTSG 473 (644)
Q Consensus 441 ~~k~~fA~~--~~~~~~L~eaV~~v---kPtvLIG~S~ 473 (644)
..++- |.. .....++.+.++.. +.|++|=+++
T Consensus 204 ~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 204 FARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp GGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred HHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 11211 221 01123566666533 5788887766
No 213
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=74.76 E-value=3.9 Score=40.38 Aligned_cols=91 Identities=14% Similarity=0.229 Sum_probs=56.7
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhcc
Q 006454 385 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 463 (644)
Q Consensus 385 ~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 463 (644)
.||.|+|+ |..|..+|..+.. .| .+++++|+. . +.++..+. + .-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g-------~~V~~~~r~----~---~~~~~~~~-~---g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SA-------HHLAAIEIA----P---EGRDRLQG-M---GIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SS-------SEEEEECCS----H---HHHHHHHH-T---TCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEEECC----H---HHHHHHHh-c---CCCcCCHHHHhcC-
Confidence 48999999 9999999998864 25 368888863 1 11212111 1 1111245566664
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCC
Q 006454 464 KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 502 (644)
Q Consensus 464 kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 502 (644)
+|++|= +..+.. .+++++.+... .+..||.-+|+..
T Consensus 68 -aDvVi~-av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVVL-ALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEEE-CSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEEE-cCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 888873 333333 68888888754 3456777788854
No 214
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=74.70 E-value=1.6 Score=47.35 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHhcCCCccceecccCCCCcHHHHHHHHc-CCCcee--ecCCcchHHHHHHHHHHHHHHhC--------CC
Q 006454 313 LLHEFMTAVKQNYGERILIQVFEDFANHNAFDLLEKYG-TTHLVF--NDDIQGTASVVLAGLISAMKFLG--------GS 381 (644)
Q Consensus 313 fidefv~Av~~~fGp~~lIq~fEDf~~~nAf~lL~ryr-~~~~~F--NDDiQGTaaVvLAgll~Alr~~g--------~~ 381 (644)
.+..+++.+...+ ++ |. |+-+....-.++-++|. ..+|++ |+..-+.+.....-|+..+.... ..
T Consensus 134 ~~~~~l~~~a~~~-~~--v~-~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~ 209 (521)
T 1hyu_A 134 DVVQALNLMAVLN-PR--IK-HTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNK 209 (521)
T ss_dssp HHHHHHHHHHHHC-TT--EE-EEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHT
T ss_pred HHHHHHHHHHhHc-Cc--eE-EEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccc
Confidence 3556666666667 44 44 44333345567888996 566654 66666667666666666543321 01
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
-...+|+|+|||.||+..|..+.+ .|+ ++.++|.+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCcccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 234679999999999999988764 253 57777753
No 215
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=74.52 E-value=13 Score=39.38 Aligned_cols=110 Identities=11% Similarity=0.120 Sum_probs=60.8
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHh
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 461 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~ 461 (644)
++.+||+|+|.|.+|++.|+.+.+ .|. ++...|++-..... ..|. .-..+--.+ .. .++++
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~~~~~~--~~l~-~G~~~~~g~---~~-~~~~~ 63 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRMTPPGL--DKLP-EAVERHTGS---LN-DEWLM 63 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSSSCTTG--GGSC-TTSCEEESS---CC-HHHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCCCcchh--HHhh-CCCEEEECC---Cc-HHHhc
Confidence 567899999999999999866643 363 57788886321100 1121 111110000 12 56676
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCC
Q 006454 462 AIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGS 526 (644)
Q Consensus 462 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~GraifASGS 526 (644)
.+|.+|=.++.+- -.+++..+.. ...|++ +. .|-++...+.+.|-.|||
T Consensus 64 --~~d~vV~s~gi~~-~~p~~~~a~~--~~~~v~-------~~----~~~~~~~~~~~vI~VTGT 112 (439)
T 2x5o_A 64 --AADLIVASPGIAL-AHPSLSAAAD--AGIEIV-------GD----IELFCREAQAPIVAITGS 112 (439)
T ss_dssp --TCSEEEECTTSCT-TCHHHHHHHH--TTCEEE-------CH----HHHHHHHCCSCEEEEECS
T ss_pred --cCCEEEeCCCCCC-CCHHHHHHHH--CCCcEE-------EH----HHHHHHhcCCCEEEEECC
Confidence 4888875555542 2466665443 233443 11 233344455778888887
No 216
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=74.20 E-value=4.2 Score=39.82 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=23.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 426 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvD 426 (644)
.||.|+|+|..|..+|..+... |. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-----GH-------QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-----TC-------EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 4899999999999999988642 53 577776
No 217
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=74.20 E-value=11 Score=38.91 Aligned_cols=195 Identities=13% Similarity=0.104 Sum_probs=107.7
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 006454 351 TTHLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEI 407 (644)
Q Consensus 351 ~~~~~FNDDi---QGTaaVvLAgll~Alr~--------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m 407 (644)
..+.+.|--- +.+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~-- 166 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG-- 166 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT--
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH--
Confidence 3455555321 23455677777776652 2456889999999999999999988753
Q ss_pred HHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHH
Q 006454 408 SKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVV 483 (644)
Q Consensus 408 ~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv 483 (644)
.|+ +++.+|+... . ....+..-+ ...+|.|+++. .|+++=.- ...+.++++.+
T Consensus 167 ---~G~-------~V~~~d~~~~----~---~~~~~~~g~----~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 167 ---WGA-------TLQYHEAKAL----D---TQTEQRLGL----RQVACSELFAS--SDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp ---SCC-------EEEEECSSCC----C---HHHHHHHTE----EECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCCC----c---HhHHHhcCc----eeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHH
Confidence 364 5888887521 1 111111111 12379999986 88887542 23468899998
Q ss_pred HHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCcccCCeeecc-------cCCCccccchhhhHHH
Q 006454 484 EAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVP-------GQANNAYIFPGLGLGL 556 (644)
Q Consensus 484 ~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~GraifASGSPF~pV~~~Gk~~~p-------~Q~NN~yiFPGiglG~ 556 (644)
+.|. +..+|.=.|+-..--|---.+|+ .+|+.-.|-=-=|++-.+ .....| =+..|+.+-|=+|-..
T Consensus 224 ~~mk---~gailIN~arg~~vd~~aL~~aL--~~g~i~gA~lDV~~~E~~-~~~~~Pl~~~~~L~~~~nvilTPHia~~t 297 (330)
T 4e5n_A 224 ALVR---PGALLVNPCRGSVVDEAAVLAAL--ERGQLGGYAADVFEMEDW-ARADRPQQIDPALLAHPNTLFTPHIGSAV 297 (330)
T ss_dssp TTSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCGGGCT-TCTTCCSSCCHHHHTCSSEEECSSCTTCC
T ss_pred hhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCccEEEecccccccc-cccCCCCCCCchHHcCCCEEECCcCCCCh
Confidence 8884 67788877763322222223333 345544332111111100 000001 1245777777765321
Q ss_pred HHhCCcccCHHHHHHHHHHHHcccC
Q 006454 557 IMSGAIRVHDDMLLAAAEALAGQVT 581 (644)
Q Consensus 557 l~s~a~~Itd~M~laAA~aLA~~v~ 581 (644)
..-.+.|...+++-|.....
T Consensus 298 -----~e~~~~~~~~~~~ni~~~~~ 317 (330)
T 4e5n_A 298 -----RAVRLEIERCAAQNILQALA 317 (330)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHHHHHHHHHc
Confidence 11234566666666666554
No 218
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=73.95 E-value=16 Score=38.11 Aligned_cols=208 Identities=16% Similarity=0.124 Sum_probs=117.1
Q ss_pred ceecccCCCCcHHHHHHHHcCCCceeecCC---cchHHHHHHHHHHHHHHh------------------------C-CCC
Q 006454 331 IQVFEDFANHNAFDLLEKYGTTHLVFNDDI---QGTASVVLAGLISAMKFL------------------------G-GSL 382 (644)
Q Consensus 331 Iq~fEDf~~~nAf~lL~ryr~~~~~FNDDi---QGTaaVvLAgll~Alr~~------------------------g-~~L 382 (644)
|+ .--.+..| .++-.--+..+.|.|--- +.+|=-+++.+|+..|-. | ..|
T Consensus 89 I~-~~~~G~d~-id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l 166 (347)
T 1mx3_A 89 IV-RIGSGFDN-IDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARI 166 (347)
T ss_dssp EE-ESSSCCTT-BCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCC
T ss_pred EE-EcccccCc-ccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCC
Confidence 55 45555444 222222234677777432 344555788888887721 1 468
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhc
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 462 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 462 (644)
.+.++.|+|.|..|..+|+.+.. .|+ +++.+|++- .. .....+ ......+|.|+++.
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~~-----~~~~~~--g~~~~~~l~ell~~ 223 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKA-----FGF-------NVLFYDPYL----SD-----GVERAL--GLQRVSTLQDLLFH 223 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTTS----CT-----THHHHH--TCEECSSHHHHHHH
T ss_pred CCCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch-----hhHhhc--CCeecCCHHHHHhc
Confidence 89999999999999999998854 364 588888641 11 011111 00112478898886
Q ss_pred cCCcEEEEcc----CCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEe-----eCCCCCCccc
Q 006454 463 IKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFA-----SGSPFDPFEY 533 (644)
Q Consensus 463 vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~GraifA-----SGSPF~pV~~ 533 (644)
.|+++=.- ...++++++.++.|. +.-+|.=.|+=..--|..-.+|++ +|+.-.| ..-|+++
T Consensus 224 --aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~--- 293 (347)
T 1mx3_A 224 --SDCVTLHCGLNEHNHHLINDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF--- 293 (347)
T ss_dssp --CSEEEECCCCCTTCTTSBSHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT---
T ss_pred --CCEEEEcCCCCHHHHHHhHHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC---
Confidence 88887532 234578888888774 566888777643223322334443 4544322 2233221
Q ss_pred CCeeecccCCCccccchhhhHHHHHhCCcccCHHHHHHHHHHHHccc
Q 006454 534 GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQV 580 (644)
Q Consensus 534 ~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v 580 (644)
.+.. -=..+|+.+-|=++-. .....+.|...+++-+....
T Consensus 294 ~~~~--L~~~~nvi~tPHia~~-----t~~~~~~~~~~~~~ni~~~~ 333 (347)
T 1mx3_A 294 SQGP--LKDAPNLICTPHAAWY-----SEQASIEMREEAAREIRRAI 333 (347)
T ss_dssp TSST--TTTCSSEEECSSCTTC-----CHHHHHHHHHHHHHHHHHHH
T ss_pred CCch--HHhCCCEEEEchHHHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 1111 1246899999987632 22223455556666665554
No 219
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=73.83 E-value=4.5 Score=37.55 Aligned_cols=96 Identities=9% Similarity=0.163 Sum_probs=53.6
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhcc
Q 006454 385 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 463 (644)
Q Consensus 385 ~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 463 (644)
.||+|.|| |-.|..+++.|++ .| .++++++++. ++.+.+...-..+.-+..+..++.++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHP----EKIKIENEHLKVKKADVSSLDEVCEVCKG- 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCG----GGCCCCCTTEEEECCCTTCHHHHHHHHTT-
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCc----ccchhccCceEEEEecCCCHHHHHHHhcC-
Confidence 58999996 6666666666643 25 4788888852 11111211111111122223467788874
Q ss_pred CCcEEEEccCCCC----------CCCHHHHHHHHcCCCCcEEEec
Q 006454 464 KPTILIGTSGQGR----------TFTKEVVEAMASLNEKPIIFSL 498 (644)
Q Consensus 464 kPtvLIG~S~~~g----------~Fteevv~~Ma~~~erPIIFaL 498 (644)
+|++|=+.+... ..+..++++|.+..-+-+||.=
T Consensus 68 -~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 111 (227)
T 3dhn_A 68 -ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVG 111 (227)
T ss_dssp -CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred -CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 899998765431 1245677777766555666643
No 220
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=73.75 E-value=2 Score=46.48 Aligned_cols=37 Identities=27% Similarity=0.497 Sum_probs=32.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.|++.||+++|||..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 37 ~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 37 LLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 45688999999999999999999874 76 789999986
No 221
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=73.70 E-value=6.8 Score=38.40 Aligned_cols=101 Identities=14% Similarity=0.284 Sum_probs=57.5
Q ss_pred CCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCcc--CCchh----hhhhcc-ccCCCC
Q 006454 383 ADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE--SLQHF----KKPWAH-EHEPVK 454 (644)
Q Consensus 383 ~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~--~L~~~----k~~fA~-~~~~~~ 454 (644)
++.+|+|.|| |-.|..+++.|++ .| .+++++|++. +..+ .+... +..+.. +..+..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 65 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRS----GEFASWRLKELGIENDVKIIHMDLLEFS 65 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCC----STTTTHHHHHTTCTTTEEECCCCTTCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCC----cccccccHhhccccCceeEEECCCCCHH
Confidence 4578999998 7777777777754 25 3688888742 1100 01000 011111 112224
Q ss_pred CHHHHHhccCCcEEEEccCCCCC------C----------CHHHHHHHHcCCC-CcEEEecC
Q 006454 455 ELVDAVNAIKPTILIGTSGQGRT------F----------TKEVVEAMASLNE-KPIIFSLS 499 (644)
Q Consensus 455 ~L~eaV~~vkPtvLIG~S~~~g~------F----------teevv~~Ma~~~e-rPIIFaLS 499 (644)
++.++++.+++|++|=+.+.... + |..+++++.+... +.|||.=|
T Consensus 66 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 66 NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 57788888899999998876421 0 3445666555443 67887644
No 222
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=73.65 E-value=1.4 Score=45.98 Aligned_cols=118 Identities=17% Similarity=0.236 Sum_probs=69.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcccc--CCCCCHHH
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVD 458 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~e 458 (644)
+....||.++|||..|.++|-.++.. |+ ...+.|+|.+-=..++-.-+|.+. ..|.... ....+. +
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~-~ 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDY-S 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSG-G
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCH-H
Confidence 34567999999999999999888642 54 257999997410000000012221 1232210 011344 3
Q ss_pred HHhccCCcEEEEccCCC---C-----CC------CHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcc
Q 006454 459 AVNAIKPTILIGTSGQG---R-----TF------TKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTW 515 (644)
Q Consensus 459 aV~~vkPtvLIG~S~~~---g-----~F------teevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~w 515 (644)
+++. .|++|=+.+.+ | +| -+++.+.|++++..-+|+-.|||.. ...+-+++.
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd---i~t~~~~k~ 149 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVD---ILTYVAWKI 149 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHH---HHHHHHHHH
Confidence 4665 88887444433 3 12 2477888889999999999999973 333444444
No 223
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=73.45 E-value=3.1 Score=41.67 Aligned_cols=33 Identities=15% Similarity=0.255 Sum_probs=26.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
..||.|+|+|..|.++|..+.. .|. +++++|++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~-----~G~-------~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE-----WPG-------GVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT-----STT-------CEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 3589999999999999998864 253 57888874
No 224
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=73.41 E-value=15 Score=36.99 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=27.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.||.|+|+|..|.++|..+... |. ++++++|+.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 6899999999999999999764 53 478889884
No 225
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=73.29 E-value=1.4 Score=46.12 Aligned_cols=116 Identities=12% Similarity=0.132 Sum_probs=68.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcccc--CCCCCHHHHHh
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVN 461 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~eaV~ 461 (644)
..||.++|||..|.++|-.++.. |+ -..+.|+|.+-=..++-..+|.+. ..|.... ....++.+ ++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~~ 88 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-SA 88 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-hC
Confidence 46999999999999999988753 55 247999997310000000012221 2333211 01134443 55
Q ss_pred ccCCcEEEEccCC---CC-----CC------CHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccc
Q 006454 462 AIKPTILIGTSGQ---GR-----TF------TKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS 516 (644)
Q Consensus 462 ~vkPtvLIG~S~~---~g-----~F------teevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT 516 (644)
. .|+.|=+.+. +| +| -+++++.+.+++..-+|+-.|||.. ....-+++.+
T Consensus 89 d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvd---i~t~~~~k~s 152 (330)
T 3ldh_A 89 G--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGT---DKNKQDWKLS 152 (330)
T ss_dssp S--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH---HHHHHHHHHH
T ss_pred C--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccH---HHHHHHHHHh
Confidence 4 8988834333 33 12 2467788889999999999999972 3344455544
No 226
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=73.08 E-value=6.3 Score=38.56 Aligned_cols=97 Identities=18% Similarity=0.230 Sum_probs=55.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 464 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 464 (644)
.||.|+|+|..|..+|..+.. .|.. .+++++|++. +.++..++.-+.. ....++.|+++. +
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~-----~~V~~~d~~~-------~~~~~~~~~g~~~-~~~~~~~~~~~~-~ 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDINP-------ESISKAVDLGIID-EGTTSIAKVEDF-S 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCH-------HHHHHHHHTTSCS-EEESCGGGGGGT-C
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCC-----cEEEEEeCCH-------HHHHHHHHCCCcc-cccCCHHHHhcC-C
Confidence 379999999999999998864 2531 3688888741 1111111000000 012356666662 3
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHc-CCCCcEEEecCCCC
Q 006454 465 PTILIGTSGQGRTFTKEVVEAMAS-LNEKPIIFSLSNPT 502 (644)
Q Consensus 465 PtvLIG~S~~~g~Fteevv~~Ma~-~~erPIIFaLSNPt 502 (644)
+|++| ++..+ ..+.++++.+.. ..+..+|.-+||-.
T Consensus 63 aDvVi-lavp~-~~~~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 PDFVM-LSSPV-RTFREIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp CSEEE-ECSCH-HHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred CCEEE-EcCCH-HHHHHHHHHHHhhCCCCcEEEECCCCc
Confidence 78777 33333 246677777654 33455777677744
No 227
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=72.64 E-value=8.6 Score=38.08 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=58.1
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHH
Q 006454 380 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 458 (644)
Q Consensus 380 ~~L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 458 (644)
++++..+|+|.|| |-.|..+++.|++ .| -+++.+|+.. .. ..+...+ -+..+..++.+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~-~~~~~~~----~Dl~d~~~~~~ 73 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRT-----QG-------RTVRGFDLRP----SG-TGGEEVV----GSLEDGQALSD 73 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEESSC----CS-SCCSEEE----SCTTCHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC----CC-CCccEEe----cCcCCHHHHHH
Confidence 4577789999998 8888888887764 25 3578887742 11 1111111 12222245778
Q ss_pred HHhccCCcEEEEccCCCCCC--------------CHHHHHHHHcCCCCcEEEecC
Q 006454 459 AVNAIKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 459 aV~~vkPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLS 499 (644)
+++ ++|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 74 ~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 74 AIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 887 599999887754311 345888888777778888655
No 228
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=72.52 E-value=13 Score=38.09 Aligned_cols=121 Identities=16% Similarity=0.156 Sum_probs=75.2
Q ss_pred CCceeecCC---cchHHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 006454 352 THLVFNDDI---QGTASVVLAGLISAMKF---------------------LGGSLADQRFLFLGAGEAGTGIAELIALEI 407 (644)
Q Consensus 352 ~~~~FNDDi---QGTaaVvLAgll~Alr~---------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m 407 (644)
.+.+.|--- +.+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 90 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~-- 167 (320)
T 1gdh_A 90 GIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQG-- 167 (320)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHT--
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHH--
Confidence 455555332 23344477777777653 2346889999999999999999998853
Q ss_pred HHhcCCChhhhcCeEEEEcc-CCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHH
Q 006454 408 SKQTNMPLEETRKKIWLVDS-KGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEV 482 (644)
Q Consensus 408 ~~~~Gls~eeAr~~i~lvDs-~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteev 482 (644)
.| -+++.+|+ .. +. ...+..-+ ....+|.|+++. .|+++=.-- ..+.++++.
T Consensus 168 ---~G-------~~V~~~d~~~~-------~~-~~~~~~g~---~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~~ 224 (320)
T 1gdh_A 168 ---FD-------MDIDYFDTHRA-------SS-SDEASYQA---TFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKAT 224 (320)
T ss_dssp ---TT-------CEEEEECSSCC-------CH-HHHHHHTC---EECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHH
T ss_pred ---CC-------CEEEEECCCCc-------Ch-hhhhhcCc---EEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHHH
Confidence 25 36888887 41 10 01110001 112378898886 888774421 235777888
Q ss_pred HHHHHcCCCCcEEEecCC
Q 006454 483 VEAMASLNEKPIIFSLSN 500 (644)
Q Consensus 483 v~~Ma~~~erPIIFaLSN 500 (644)
++.|. +.-+|.-.|.
T Consensus 225 l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 225 IKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HTTSC---TTEEEEECSC
T ss_pred HhhCC---CCcEEEECCC
Confidence 87774 5567777775
No 229
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=72.47 E-value=3.2 Score=40.87 Aligned_cols=32 Identities=16% Similarity=0.282 Sum_probs=25.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----G-------YSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 4899999999999999888642 5 258888874
No 230
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=72.39 E-value=3.2 Score=41.25 Aligned_cols=36 Identities=19% Similarity=0.413 Sum_probs=28.8
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+..+|+|+|||.||+..|..+.+ .|. .++.++|+..
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 35689999999999999998864 253 2799999874
No 231
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=71.91 E-value=2.1 Score=37.88 Aligned_cols=32 Identities=16% Similarity=0.393 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SD-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 578999999999999998865 25 368999984
No 232
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=71.82 E-value=11 Score=36.88 Aligned_cols=93 Identities=12% Similarity=0.214 Sum_probs=58.3
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHhc
Q 006454 385 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 462 (644)
Q Consensus 385 ~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 462 (644)
.||+|.|| |-.|..+++.|++ .| .+++.+++. .+..+ +. ...+.. +.. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 8888888887765 25 368888885 22211 22 111111 222 345777777
Q ss_pred cCCcEEEEccCCCCC------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 463 IKPTILIGTSGQGRT------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 463 vkPtvLIG~S~~~g~------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
++|++|=+.+..+. -|..+++++.+.+-+-+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 69999988776532 1467888888777667888543
No 233
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=71.30 E-value=20 Score=35.93 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=61.5
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch-hhhhhcc-ccC-CCCCH
Q 006454 381 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH-FKKPWAH-EHE-PVKEL 456 (644)
Q Consensus 381 ~L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~-~k~~fA~-~~~-~~~~L 456 (644)
.+...||+|.|| |-.|..+++.|++. .| .+++.+|+.. ++...+.. ....+.. +.. +..++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 466789999995 88888888877653 13 4688888742 11111111 1111211 222 23457
Q ss_pred HHHHhccCCcEEEEccCCCC----------------CCCHHHHHHHHcCCCCcEEEecC
Q 006454 457 VDAVNAIKPTILIGTSGQGR----------------TFTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 457 ~eaV~~vkPtvLIG~S~~~g----------------~Fteevv~~Ma~~~erPIIFaLS 499 (644)
.++++. +|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 778874 999997666432 23567899988877 78888655
No 234
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=71.11 E-value=3.6 Score=41.13 Aligned_cols=32 Identities=22% Similarity=0.328 Sum_probs=25.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
-||+|+|||.||+-.|-.|.+ .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 489999999999999988865 375 46677754
No 235
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=71.04 E-value=12 Score=37.54 Aligned_cols=93 Identities=17% Similarity=0.279 Sum_probs=53.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc---cc-------c--CC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA---HE-------H--EP 452 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA---~~-------~--~~ 452 (644)
.||.|+|+|..|..+|..+... | .+++++|++. +.++..++... .. . ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----G-------QSVLAWDIDA-------QRIKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCH-------HHHHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEeCCH-------HHHHHHHhcCCeEEecccccccccccee
Confidence 5899999999999999888642 5 3588888741 11111111100 00 0 01
Q ss_pred CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEecCC
Q 006454 453 VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSN 500 (644)
Q Consensus 453 ~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSN 500 (644)
..++.++++. +|++|=+.. . ...+++++.++.. .+..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~~v~-~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILIVVP-A-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEECSC-G-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEEeCC-c-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2467777764 787663322 2 2357888877654 33455665644
No 236
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=70.44 E-value=2.9 Score=47.56 Aligned_cols=37 Identities=30% Similarity=0.476 Sum_probs=32.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+|+..||+++|+|..|+-+|+.|+.+ |+ ++|.++|.+
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 46789999999999999999999875 76 789999987
No 237
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=70.14 E-value=1.7 Score=45.30 Aligned_cols=110 Identities=16% Similarity=0.139 Sum_probs=67.4
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC---cccCCCccCCchhhhhhccccCCCCCHHHHH
Q 006454 385 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG---LIVSSRLESLQHFKKPWAHEHEPVKELVDAV 460 (644)
Q Consensus 385 ~riv~~G-AGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G---Li~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 460 (644)
.||++.| ||..|.-+|-+|+. .|+-.++-.-.+.|+|... .+.-... +|.+...+|.++.....++.+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~~l~L~Di~~~~~~~~g~a~-DL~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPIILVLLDITPMMGVLDGVLM-ELQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCCEEEEEeCCCccccchhhHh-hhHhhhhcccCCEEEcCCcHHHh
Confidence 5899999 79999998888764 2441111111399999852 1111111 14332223433222235688888
Q ss_pred hccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcE-EEecCCCC
Q 006454 461 NAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPI-IFSLSNPT 502 (644)
Q Consensus 461 ~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPI-IFaLSNPt 502 (644)
+. .|++|=+.+.+ |- ..+++++++.+++.+-+ |+-.|||.
T Consensus 78 ~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv 132 (333)
T 5mdh_A 78 KD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA 132 (333)
T ss_dssp TT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch
Confidence 86 89888555443 21 24678888888888774 88899996
No 238
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=69.81 E-value=11 Score=41.57 Aligned_cols=99 Identities=13% Similarity=0.273 Sum_probs=55.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHH----HH
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV----DA 459 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~----ea 459 (644)
+.||||+|||+.|-++|.+|++. .++. ..+|.+.|++- .+.+-.+.....+....-...+.. .+
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~----~~~~~~~~~g~~~~~~~Vdadnv~~~l~aL 80 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEG----TKVDVAQQYGVSFKLQQITPQNYLEVIGST 80 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSC----CSCCHHHHHTCEEEECCCCTTTHHHHTGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccch----hhhhHHhhcCCceeEEeccchhHHHHHHHH
Confidence 57899999999999999999864 3432 24688888742 111101111112221111112232 34
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 006454 460 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 500 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 500 (644)
|+. +|++|=+| ...++.+++++-.+. .=-.+-++|
T Consensus 81 l~~--~DvVIN~s--~~~~~l~Im~aclea--Gv~YlDTa~ 115 (480)
T 2ph5_A 81 LEE--NDFLIDVS--IGISSLALIILCNQK--GALYINAAT 115 (480)
T ss_dssp CCT--TCEEEECC--SSSCHHHHHHHHHHH--TCEEEESSC
T ss_pred hcC--CCEEEECC--ccccCHHHHHHHHHc--CCCEEECCC
Confidence 543 59999644 335777888876532 223455555
No 239
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=69.20 E-value=12 Score=36.49 Aligned_cols=79 Identities=16% Similarity=0.197 Sum_probs=43.9
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHH
Q 006454 379 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 458 (644)
Q Consensus 379 g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 458 (644)
..+++++++||.||++ ||...|+..+.+ .| -+++++|++.- .+......+.-+..+..++.+
T Consensus 9 ~~~~~~k~vlVTGas~---GIG~aia~~l~~-~G-------~~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~~ 70 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSS---GIGLAVVDALVR-YG-------AKVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVKE 70 (269)
T ss_dssp -CTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESCC---------CTTSSEEEECCTTCHHHHHH
T ss_pred ccCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCch-------hccCceeEEEecCCCHHHHHH
Confidence 4578899999999854 444455555544 36 35888886421 111111111112222234555
Q ss_pred HHhcc-----CCcEEEEccCCC
Q 006454 459 AVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 459 aV~~v-----kPtvLIG~S~~~ 475 (644)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 71 AVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcC
Confidence 66655 899999777654
No 240
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=69.10 E-value=9.9 Score=37.18 Aligned_cols=79 Identities=11% Similarity=0.114 Sum_probs=44.3
Q ss_pred CCCCceEEEeCcC-h--HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc------ccC
Q 006454 381 SLADQRFLFLGAG-E--AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH------EHE 451 (644)
Q Consensus 381 ~L~d~riv~~GAG-s--AG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~------~~~ 451 (644)
.+++.++||.||. . .|..||+.+++ .| -+++++|+.- ..+.+...+..+.+ +..
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~-----~~~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EG-------AELAFTYVGQ-----FKDRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TT-------CEEEEEECTT-----CHHHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cC-------CEEEEeeCch-----HHHHHHHHHHhcCCceEEEeecC
Confidence 4778899999974 3 45556665543 35 3588888863 01112222221111 112
Q ss_pred CCCCHHHHHhcc-----CCcEEEEccCCCC
Q 006454 452 PVKELVDAVNAI-----KPTILIGTSGQGR 476 (644)
Q Consensus 452 ~~~~L~eaV~~v-----kPtvLIG~S~~~g 476 (644)
...++.++++.+ ++|+||=..+...
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFAP 115 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 223455556555 7999998877653
No 241
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=68.76 E-value=8 Score=37.06 Aligned_cols=93 Identities=14% Similarity=0.177 Sum_probs=56.1
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHH
Q 006454 381 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 459 (644)
Q Consensus 381 ~L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 459 (644)
.++..||+|.|| |-.|..+++.|.+ .|.. .....- .+...+. +..+..++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~---~~~~~~--------------~~~~~~~----D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAGL---PGEDWV--------------FVSSKDA----DLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTCC---TTCEEE--------------ECCTTTC----CTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCCc---cccccc--------------ccCceec----ccCCHHHHHHH
Confidence 466789999996 8888888777764 3530 000000 0111110 11122457888
Q ss_pred HhccCCcEEEEccCCCCC-----------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 460 VNAIKPTILIGTSGQGRT-----------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~-----------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
++..++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 988899999988876431 1335788887776667888544
No 242
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=68.45 E-value=6.1 Score=38.19 Aligned_cols=86 Identities=12% Similarity=0.261 Sum_probs=54.6
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccC
Q 006454 386 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 464 (644)
Q Consensus 386 riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 464 (644)
||+|.|| |-.|..+++.|+ . | .+++.+|++.-... -+..+..++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~~--------------~D~~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEFC--------------GDFSNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSSC--------------CCTTCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEecccccccc--------------ccCCCHHHHHHHHHhcC
Confidence 7899998 877877777664 2 4 46888887531110 01111235778888778
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 465 PTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 465 PtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
+|++|=+.+.... -+..+++++.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999998876531 14567777765544 5887544
No 243
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=68.24 E-value=4.9 Score=40.86 Aligned_cols=33 Identities=27% Similarity=0.358 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.||.|+|+|..|.++|..+... |. .+++++|+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999988753 51 468888875
No 244
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=68.06 E-value=16 Score=35.67 Aligned_cols=95 Identities=16% Similarity=0.235 Sum_probs=53.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccC
Q 006454 386 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 464 (644)
Q Consensus 386 riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 464 (644)
+|+|.|| |-.|..+++.|++ .| .++.+++.. ..+.+.+...-..+.-+..+ .++.++++ +
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-----~g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~ 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-----SN--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLK--G 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-----TS--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHT--T
T ss_pred EEEEECCCchHHHHHHHHHHh-----CC--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhc--C
Confidence 7899997 7677777766643 23 344444321 11111111111111112233 67888887 5
Q ss_pred CcEEEEccCCCCC-C---------------CHHHHHHHHcCCCCcEEEecC
Q 006454 465 PTILIGTSGQGRT-F---------------TKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 465 PtvLIG~S~~~g~-F---------------teevv~~Ma~~~erPIIFaLS 499 (644)
+|++|-+.+.... . |..++++|.+..-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988875421 1 234778887777778998655
No 245
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=67.99 E-value=3.8 Score=40.00 Aligned_cols=34 Identities=12% Similarity=0.377 Sum_probs=27.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
..+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4689999999999999988864 353 589999864
No 246
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=67.66 E-value=9.5 Score=36.81 Aligned_cols=30 Identities=20% Similarity=0.285 Sum_probs=23.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
||.|+|+|..|..+|..+... |. +++++|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-----g~-------~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-----GV-------EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC-----CC-------eEEEeCC
Confidence 789999999999999988652 53 5776665
No 247
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=67.46 E-value=23 Score=36.72 Aligned_cols=111 Identities=14% Similarity=0.156 Sum_probs=70.8
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHH
Q 006454 379 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 458 (644)
Q Consensus 379 g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 458 (644)
|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+. .+ + ...... ....+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~-----~~-~---~~~~~~----~~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV-----KR-E---DLKEKG----CVYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS-----CC-H---HHHHTT----CEECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCc-----cc-h---hhhhcC----ceecCHHH
Confidence 4568889999999999999999888543 64 57777763 11 1 111111 12257999
Q ss_pred HHhccCCcEEEEc----cCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcc--cCCcEEEe
Q 006454 459 AVNAIKPTILIGT----SGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTW--SQGRAIFA 523 (644)
Q Consensus 459 aV~~vkPtvLIG~----S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~w--T~GraifA 523 (644)
.++. .|+++=. ...-+.|+++.++.|. +..++.=.| +-++-=|+|+-. ..|+.--|
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk---~~a~lIN~a----RG~iVde~aL~~aL~~g~i~gA 252 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTA----RGKVVDTDALYRAYQRGKFSGL 252 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECS----CGGGBCHHHHHHHHHTTCEEEE
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcC---CCeEEEecC----ccccccHHHHHHHHHhCCceEE
Confidence 9987 8888743 2334799999999994 555666444 455555554421 35655433
No 248
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=67.31 E-value=8.3 Score=39.50 Aligned_cols=41 Identities=20% Similarity=0.343 Sum_probs=26.5
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 006454 456 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 500 (644)
Q Consensus 456 L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 500 (644)
+...++..|||++||..+.. --.....|+....|+|.=-+|
T Consensus 84 ~~~~l~~~~PDvVi~~g~~~----s~p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 84 ALRVIRQLRPVCVLGLGGYV----TGPGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHHCCSEEEECSSST----HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHhcCCCEEEEcCCcc----hHHHHHHHHHcCCCEEEEecc
Confidence 34568888999999986643 112222345567899975555
No 249
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=67.19 E-value=3.9 Score=42.80 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+||||+|+|.||+..|..|.+. +- .-+|.|+|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4899999999999999988653 21 1368888875
No 250
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=67.16 E-value=13 Score=36.40 Aligned_cols=99 Identities=13% Similarity=0.160 Sum_probs=57.3
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHhc
Q 006454 385 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 462 (644)
Q Consensus 385 ~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 462 (644)
.+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+.. ...+.. +..+..++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVD-----EG-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37899986 7777777777754 25 3688887631 111111211 111111 11222357777876
Q ss_pred cCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 463 IKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 463 vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
.++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 679999988775431 1345777777666567888544
No 251
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=66.98 E-value=5.7 Score=40.99 Aligned_cols=103 Identities=21% Similarity=0.293 Sum_probs=64.6
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCC--CCCHHHHHhc
Q 006454 386 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP--VKELVDAVNA 462 (644)
Q Consensus 386 riv~~G-AGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~--~~~L~eaV~~ 462 (644)
||.|+| +|..|..+|-+|... .++ ...+.|+|..-. ..+-.-+|.+. ++-..-.. ..+..++.+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 799999 899999998777542 243 257999999741 11111112221 11000000 0246678886
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 463 IKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 463 vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
.|+.|=+.+.+ |- .-+++++.+.+++..-+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 99888666554 21 1246777888899999999999997
No 252
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=66.89 E-value=18 Score=35.59 Aligned_cols=97 Identities=18% Similarity=0.117 Sum_probs=58.8
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhh----------cc-ccC
Q 006454 384 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW----------AH-EHE 451 (644)
Q Consensus 384 d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f----------A~-~~~ 451 (644)
..+|+|.|| |-.|..+++.|++ .| .+++++|+.. . ........+ .. +..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV----N---SKREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS----S---SCTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC----c---chHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 6666666666654 25 3688888741 1 111111111 01 111
Q ss_pred CCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 452 PVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 452 ~~~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
+..++.++++..++|++|=+.+.... -|..++++|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 22457788887789999988775421 1446788888777678888644
No 253
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=66.82 E-value=7.8 Score=37.87 Aligned_cols=87 Identities=14% Similarity=0.194 Sum_probs=55.2
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhc
Q 006454 384 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 462 (644)
Q Consensus 384 d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 462 (644)
..||+|.|| |-.|..+++.|++ .|. +++++++. ... ++. +..++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~-D~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DEL-NLL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTC-CTT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccC-Ccc-----------CHHHHHHHHHh
Confidence 468999996 7777777777653 242 46666543 111 121 11357778886
Q ss_pred cCCcEEEEccCCCCC-----------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 463 IKPTILIGTSGQGRT-----------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 463 vkPtvLIG~S~~~g~-----------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
+++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 789999988876531 1346677777666667888654
No 254
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=66.44 E-value=5.2 Score=38.14 Aligned_cols=32 Identities=28% Similarity=0.369 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+|+|+|||.||+..|..|.. .| .++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----AR-------KNILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCC
Confidence 589999999999999988865 25 368999974
No 255
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=66.02 E-value=13 Score=36.31 Aligned_cols=98 Identities=17% Similarity=0.271 Sum_probs=55.3
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHhcc
Q 006454 386 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 463 (644)
Q Consensus 386 riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~v 463 (644)
||+|.|| |-.|..+++.|++ .| .+++++|+.- ....+.+.. ...+.. +..+..++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6899987 6667677766653 25 3578887621 111111211 111111 112223577788766
Q ss_pred CCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 464 KPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 464 kPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
++|++|=+.+..+. -|..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 89999988876431 0345677776665567887544
No 256
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=65.96 E-value=19 Score=37.62 Aligned_cols=84 Identities=19% Similarity=0.350 Sum_probs=66.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch
Q 006454 363 TASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 441 (644)
Q Consensus 363 TaaVvLAgll~Alr~~g~~L~d~riv~~GAGs-AG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~ 441 (644)
-.-+|-.|++--|+..+.+|+..++|++|.+. .|.-+|-||.. .|. .+.+|.|+
T Consensus 158 ~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------- 212 (303)
T 4b4u_A 158 YGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------- 212 (303)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-------------
T ss_pred ccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-------------
Confidence 34578889999999999999999999999664 57777777654 243 36666542
Q ss_pred hhhhhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHH
Q 006454 442 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVE 484 (644)
Q Consensus 442 ~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~ 484 (644)
.++|.+.+++ +|++|...+.++.++.++|+
T Consensus 213 -----------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk 242 (303)
T 4b4u_A 213 -----------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK 242 (303)
T ss_dssp -----------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC
T ss_pred -----------CCCHHHHhhc--CCeEEeccCCCCcccccccc
Confidence 1358888886 99999999999999999886
No 257
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=65.81 E-value=12 Score=34.92 Aligned_cols=102 Identities=16% Similarity=0.173 Sum_probs=54.1
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHH
Q 006454 382 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 459 (644)
Q Consensus 382 L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~ea 459 (644)
++..+++|.|| |-.|..+++.|++. |. ..+++++|++. ++.+.+......+.. +-.+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 34578999995 66777777776642 52 12788888752 111111111111111 11122345566
Q ss_pred HhccCCcEEEEccCCCCC-------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 460 VNAIKPTILIGTSGQGRT-------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~-------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
++ ++|++|=+.+.... -+..++++|.+...+-|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 65 58999988775420 1345666666554455666433
No 258
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=65.73 E-value=17 Score=36.38 Aligned_cols=32 Identities=19% Similarity=0.402 Sum_probs=25.7
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~G-AGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.||.|+| +|..|..+|..+.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 5899999 99999999998864 253 58888864
No 259
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=65.73 E-value=8.1 Score=36.92 Aligned_cols=81 Identities=14% Similarity=0.147 Sum_probs=44.7
Q ss_pred CCCCCCceEEEeCcC---hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc------c
Q 006454 379 GGSLADQRFLFLGAG---EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH------E 449 (644)
Q Consensus 379 g~~L~d~riv~~GAG---sAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~------~ 449 (644)
..+++++++||.||+ -.|.+||+.+++ .| -+++++|+.. ...+.+......+.+ +
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D 72 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EG-------AELAFTYVGD----RFKDRITEFAAEFGSELVFPCD 72 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHHHHHTTCCCEEECC
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cC-------CCEEEEecch----hhHHHHHHHHHHcCCcEEEECC
Confidence 356889999999984 445556666553 36 3688888751 111112222111111 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 450 HEPVKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 450 ~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
.....++.++++.+ ++|+||=..+..
T Consensus 73 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 73 VADDAQIDALFASLKTHWDSLDGLVHSIGFA 103 (271)
T ss_dssp TTCHHHHHHHHHHHHHHCSCEEEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 11223455555555 789999777654
No 260
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=65.68 E-value=4.5 Score=46.26 Aligned_cols=35 Identities=26% Similarity=0.508 Sum_probs=31.3
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+..||+++|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 678999999999999999998864 76 799999987
No 261
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=65.57 E-value=5.2 Score=37.81 Aligned_cols=92 Identities=15% Similarity=0.183 Sum_probs=51.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhh----hcc-ccCCCCCHHHH-
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP----WAH-EHEPVKELVDA- 459 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~----fA~-~~~~~~~L~ea- 459 (644)
||+|+|+|..|..+|+.|... | .+++++|++ . +.+...... +-. +......|.++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~----~---~~~~~l~~~~~~~~i~gd~~~~~~l~~a~ 62 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKD----R---ELCEEFAKKLKATIIHGDGSHKEILRDAE 62 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESC----H---HHHHHHHHHSSSEEEESCTTSHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC----H---HHHHHHHHHcCCeEEEcCCCCHHHHHhcC
Confidence 799999999999999988652 5 468899974 1 112211111 111 11111235444
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHc-CCCCcEEEecCC
Q 006454 460 VNAIKPTILIGTSGQGRTFTKEVVEAMAS-LNEKPIIFSLSN 500 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~-~~erPIIFaLSN 500 (644)
++ +++++|-+.... .....+..+++ .+..+-|++..|
T Consensus 63 i~--~ad~vi~~~~~d--~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 63 VS--KNDVVVILTPRD--EVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp CC--TTCEEEECCSCH--HHHHHHHHHHHHTSCCCEEEECCC
T ss_pred cc--cCCEEEEecCCc--HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 33 589998665533 22333444443 356666666655
No 262
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=65.57 E-value=5.3 Score=38.59 Aligned_cols=90 Identities=13% Similarity=0.150 Sum_probs=53.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 464 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 464 (644)
.||.|+|+|..|..+|..+.. .| .+++++|++ . +.+....+.+ ......++.|+++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~~~~-- 60 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS----L---ERSKEIAEQL--ALPYAMSHQDLIDQ-- 60 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS----H---HHHHHHHHHH--TCCBCSSHHHHHHT--
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC----H---HHHHHHHHHc--CCEeeCCHHHHHhc--
Confidence 489999999999999887753 24 468888863 1 1122222111 11223578888874
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 465 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 465 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
+|++|=+.. + ...+++++.+. +..+|.-+++-.
T Consensus 61 ~D~Vi~~v~-~-~~~~~v~~~l~---~~~~vv~~~~~~ 93 (259)
T 2ahr_A 61 VDLVILGIK-P-QLFETVLKPLH---FKQPIISMAAGI 93 (259)
T ss_dssp CSEEEECSC-G-GGHHHHHTTSC---CCSCEEECCTTC
T ss_pred CCEEEEEeC-c-HhHHHHHHHhc---cCCEEEEeCCCC
Confidence 888774333 3 34567776653 334666665543
No 263
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=65.51 E-value=6.6 Score=40.84 Aligned_cols=36 Identities=28% Similarity=0.437 Sum_probs=27.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 431 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi 431 (644)
.-||||+|||.||+..|..|. ..| .+|.++|+.--+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 458999999999999999881 122 579999886543
No 264
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=65.08 E-value=5.7 Score=40.99 Aligned_cols=37 Identities=27% Similarity=0.452 Sum_probs=29.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 431 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi 431 (644)
++|||+|||.||+..|..|.+ .|.+ .+|.++|+..-.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCCCC
Confidence 589999999999999998865 3541 379999987533
No 265
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=64.78 E-value=10 Score=39.25 Aligned_cols=37 Identities=16% Similarity=0.310 Sum_probs=29.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 431 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi 431 (644)
.+|||+|||.||+..|..|.+ .|. ..+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~-----~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGF-----EGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCc-----CCeEEEEECCCCC
Confidence 489999999999999998865 354 2469999886543
No 266
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=64.77 E-value=6.1 Score=40.05 Aligned_cols=38 Identities=18% Similarity=0.133 Sum_probs=28.0
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
+++..+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 3456799999999999999988765 363 6888887543
No 267
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=68.46 E-value=1.4 Score=42.30 Aligned_cols=92 Identities=12% Similarity=0.119 Sum_probs=53.0
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHh
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 461 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~ 461 (644)
+.+.||.|+|+|..|..+|..+... | .+++++|+.-- . +.+ +...-...++.|+++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G-------~~V~~~~r~~~----~-~~~-------~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----G-------YSVVFGSRNPQ----V-SSL-------LPRGAEVLCYSEAAS 72 (201)
Confidence 4567899999999999999888653 4 24677776421 1 111 111111125666666
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 006454 462 AIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 502 (644)
Q Consensus 462 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 502 (644)
. +|++| ++..+. -++++++ ++...+..+|.-++|..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~~-l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLAE-LADSLKGRVLIDVSNNQ 108 (201)
Confidence 4 67665 333332 3555652 33233456888888876
No 268
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=64.75 E-value=7.2 Score=39.59 Aligned_cols=50 Identities=12% Similarity=0.133 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 367 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 367 vLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.++..+.|++..+. -..++++|+|||..|...+.+.. ..|. ++++.+|+.
T Consensus 151 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~a~qla~-----~~Ga------~~Vi~~~~~ 200 (352)
T 3fpc_A 151 MMTTGFHGAELANI-KLGDTVCVIGIGPVGLMSVAGAN-----HLGA------GRIFAVGSR 200 (352)
T ss_dssp HHHHHHHHHHHTTC-CTTCCEEEECCSHHHHHHHHHHH-----TTTC------SSEEEECCC
T ss_pred hhHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHH-----HcCC------cEEEEECCC
Confidence 34444556655443 34688999999977765544432 2464 578888773
No 269
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=64.42 E-value=28 Score=35.49 Aligned_cols=50 Identities=18% Similarity=0.050 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 367 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 367 vLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
.++..+.|+.....--..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 174 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 333334455333333356899999999877766655432 253 46888876
No 270
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=64.40 E-value=6 Score=38.11 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
..+|+|+|||.||+..|..+.+ .|. ++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEecc
Confidence 4689999999999999988865 253 58999997
No 271
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=63.92 E-value=6.1 Score=38.79 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
..+|+|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RG-------LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCCC
Confidence 4689999999999999988754 25 3689999864
No 272
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=63.74 E-value=18 Score=34.60 Aligned_cols=79 Identities=14% Similarity=0.186 Sum_probs=43.7
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHH
Q 006454 378 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV 457 (644)
Q Consensus 378 ~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ 457 (644)
...++++.++||.||+. ||...++..+.+ .| -+++++|++- ++ +.... .+.-+..+..++.
T Consensus 9 ~~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~-~~~~D~~~~~~~~ 69 (247)
T 1uzm_A 9 AKPPFVSRSVLVTGGNR---GIGLAIAQRLAA-DG-------HKVAVTHRGS----GA---PKGLF-GVEVDVTDSDAVD 69 (247)
T ss_dssp CCCCCCCCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----CC---CTTSE-EEECCTTCHHHHH
T ss_pred ccccCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----HH---HHHhc-CeeccCCCHHHHH
Confidence 34468888999999743 444555555544 35 3588888741 11 21111 1111222223455
Q ss_pred HHHhcc-----CCcEEEEccCCC
Q 006454 458 DAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 458 eaV~~v-----kPtvLIG~S~~~ 475 (644)
++++.+ ++|+||=..+..
T Consensus 70 ~~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 70 RAFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 555544 689999887754
No 273
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=63.70 E-value=5.9 Score=39.19 Aligned_cols=31 Identities=23% Similarity=0.458 Sum_probs=24.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
-|+|+|||.||+-.|..|.+ .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 38999999999999888865 375 46777764
No 274
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=63.53 E-value=6.4 Score=38.19 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=26.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
..+|||+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 3589999999999999988764 253 68899986
No 275
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=62.60 E-value=8 Score=37.53 Aligned_cols=98 Identities=14% Similarity=0.163 Sum_probs=57.7
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHhc
Q 006454 385 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 462 (644)
Q Consensus 385 ~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 462 (644)
.+|+|.|| |-.|..+++.|++.- .| .+++.+|+.. .... +.+ +..+.. +..+..++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~~~-~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LNTD-VVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CSCH-HHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----cccc-ccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 888888888776520 12 3688887641 1100 100 111111 21222457788887
Q ss_pred cCCcEEEEccCCCCC---------------CCHHHHHHHHcCCCCcEEEec
Q 006454 463 IKPTILIGTSGQGRT---------------FTKEVVEAMASLNEKPIIFSL 498 (644)
Q Consensus 463 vkPtvLIG~S~~~g~---------------Fteevv~~Ma~~~erPIIFaL 498 (644)
.++|++|=+.+.... -|..+++++.+..-+.+||.=
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 117 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPS 117 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 789999988875421 134677777766556788743
No 276
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=62.52 E-value=6.3 Score=40.71 Aligned_cols=38 Identities=13% Similarity=0.287 Sum_probs=29.8
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
...+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCCC
Confidence 35789999999999999999865 3542 36999988643
No 277
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=62.38 E-value=6.9 Score=40.16 Aligned_cols=36 Identities=11% Similarity=0.173 Sum_probs=27.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
.+|||+|||.||+..|..|.+... .| .+|.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999999876211 13 4688888664
No 278
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=62.18 E-value=14 Score=35.40 Aligned_cols=77 Identities=13% Similarity=0.160 Sum_probs=41.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhh------cc-ccCCC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW------AH-EHEPV 453 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f------A~-~~~~~ 453 (644)
+|+++++||.||+. ||...++..+.+ .| -+++++|++- +.+......+ .+ +..+.
T Consensus 3 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~~ 64 (253)
T 1hxh_A 3 RLQGKVALVTGGAS---GVGLEVVKLLLG-EG-------AKVAFSDINE-------AAGQQLAAELGERSMFVRHDVSSE 64 (253)
T ss_dssp TTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEECSCH-------HHHHHHHHHHCTTEEEECCCTTCH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHcCCceEEEEccCCCH
Confidence 57788999999743 444445555544 35 3588887641 1122221111 00 11122
Q ss_pred CCHHHHHhcc-----CCcEEEEccCCC
Q 006454 454 KELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 454 ~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
.++.++++.+ ++|+||=..+..
T Consensus 65 ~~v~~~~~~~~~~~g~id~lv~~Ag~~ 91 (253)
T 1hxh_A 65 ADWTLVMAAVQRRLGTLNVLVNNAGIL 91 (253)
T ss_dssp HHHHHHHHHHHHHHCSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455555554 689999877654
No 279
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=62.14 E-value=4.6 Score=41.48 Aligned_cols=97 Identities=14% Similarity=0.139 Sum_probs=53.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHH
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 460 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 460 (644)
.+...||.|+|+|..|...++.+.. +..|. +-+.++|++ .+ ......+.|--......++.|++
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~---~~~~~------~lvav~d~~----~~---~~~~~a~~~g~~~~~~~~~~~ll 83 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLAN---TVSGV------EVVAVCDIV----AG---RAQAALDKYAIEAKDYNDYHDLI 83 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH---TCTTE------EEEEEECSS----TT---HHHHHHHHHTCCCEEESSHHHHH
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHh---hCCCc------EEEEEEeCC----HH---HHHHHHHHhCCCCeeeCCHHHHh
Confidence 3445799999999988766655532 11121 224467763 11 12233333311112247899999
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 006454 461 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 496 (644)
Q Consensus 461 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 496 (644)
+.-++|+++ +++.. .+..+++....+. .++|+.
T Consensus 84 ~~~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 116 (357)
T 3ec7_A 84 NDKDVEVVI-ITASN-EAHADVAVAALNA-NKYVFC 116 (357)
T ss_dssp HCTTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred cCCCCCEEE-EcCCc-HHHHHHHHHHHHC-CCCEEe
Confidence 987899988 55544 4555555554432 255554
No 280
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=62.03 E-value=7.7 Score=34.87 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=26.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
-+++|+|+|.+|+-.|..+.+. | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 3799999999999999888652 5 468899875
No 281
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=61.94 E-value=6 Score=38.51 Aligned_cols=30 Identities=20% Similarity=0.360 Sum_probs=23.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
||.|+|+|..|..+|..+.. |. +++++|+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCC
Confidence 79999999999999988742 42 47788763
No 282
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=61.83 E-value=24 Score=38.68 Aligned_cols=120 Identities=19% Similarity=0.137 Sum_probs=76.1
Q ss_pred CCCceeecCC---cchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHH
Q 006454 351 TTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 409 (644)
Q Consensus 351 ~~~~~FNDDi---QGTaaVvLAgll~Alr~------------------~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~ 409 (644)
..+.|.|--- ..+|=-++|-+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~---- 163 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAA---- 163 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHT----
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHh----
Confidence 3455555432 23455578888887653 2467889999999999999999998854
Q ss_pred hcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 006454 410 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 485 (644)
Q Consensus 410 ~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~ 485 (644)
.|+ +++.+|+.- .+ ...+ .+ .-...+|.|+++. .|+++=+- ...+.++++.+..
T Consensus 164 -~G~-------~V~~~d~~~----~~----~~a~-~~---g~~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~ 221 (529)
T 1ygy_A 164 -FGA-------YVVAYDPYV----SP----ARAA-QL---GIELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALAK 221 (529)
T ss_dssp -TTC-------EEEEECTTS----CH----HHHH-HH---TCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred -CCC-------EEEEECCCC----Ch----hHHH-hc---CcEEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHhC
Confidence 253 588888741 11 1111 00 1111378899986 88887543 2335677766666
Q ss_pred HHcCCCCcEEEecC
Q 006454 486 MASLNEKPIIFSLS 499 (644)
Q Consensus 486 Ma~~~erPIIFaLS 499 (644)
| .+..+|.=.|
T Consensus 222 ~---k~g~ilin~a 232 (529)
T 1ygy_A 222 T---KPGVIIVNAA 232 (529)
T ss_dssp S---CTTEEEEECS
T ss_pred C---CCCCEEEECC
Confidence 6 3566887777
No 283
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=61.78 E-value=7.7 Score=39.84 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=27.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+.+|+|+|||.||+..|-.|.+ .|+ +++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCC
Confidence 4689999999999999988865 364 2377787754
No 284
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=61.72 E-value=12 Score=36.04 Aligned_cols=97 Identities=14% Similarity=0.064 Sum_probs=57.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHhcc
Q 006454 386 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 463 (644)
Q Consensus 386 riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~v 463 (644)
||+|.|| |-.|..+++.|.+ +.| .++..++++. ++...+.+....+.+ +-.+..+|.++++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~----~~g-------~~V~~~~R~~----~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIA----NHI-------DHFHIGVRNV----EKVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHH----TTC-------TTEEEEESSG----GGSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhh----CCC-------CcEEEEECCH----HHHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 8888888877543 113 3577777642 111111111111111 22222467888875
Q ss_pred CCcEEEEccCCCCC------CCHHHHHHHHcCCCCcEEEecC
Q 006454 464 KPTILIGTSGQGRT------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 464 kPtvLIG~S~~~g~------Fteevv~~Ma~~~erPIIFaLS 499 (644)
.|++|=+++.... -++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 7999988775421 2567888888777677888533
No 285
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=61.61 E-value=7 Score=40.99 Aligned_cols=42 Identities=19% Similarity=0.295 Sum_probs=31.1
Q ss_pred HhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 377 FLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 377 ~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
+.++.-+..+|+|+|||.||+..|-.|.+ .| .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~-----~g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQK-----AG-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeccCC
Confidence 34444456799999999999999988864 25 36788887644
No 286
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=61.54 E-value=11 Score=35.14 Aligned_cols=69 Identities=13% Similarity=0.190 Sum_probs=39.1
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhcc-
Q 006454 386 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI- 463 (644)
Q Consensus 386 riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v- 463 (644)
++||.|| |-.|..+|+.|++ .| .+++++|++. + .+.. .+.-+.....++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899987 5555556655543 25 3688888741 1 1211 1111111113466667655
Q ss_pred -CCcEEEEccCCCC
Q 006454 464 -KPTILIGTSGQGR 476 (644)
Q Consensus 464 -kPtvLIG~S~~~g 476 (644)
++|++|=+.+...
T Consensus 61 ~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 61 GVLDGLVCCAGVGV 74 (255)
T ss_dssp TCCSEEEECCCCCT
T ss_pred CCccEEEECCCCCC
Confidence 8999998877653
No 287
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=61.37 E-value=7.6 Score=40.22 Aligned_cols=38 Identities=21% Similarity=0.407 Sum_probs=28.9
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 379 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 379 g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
+..+.+..|||+|||.+|+.+|-.|.+. | ..++.++|+
T Consensus 18 ~~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 18 GSHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp ---CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred cccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 3345677999999999999999988763 3 146899998
No 288
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=61.01 E-value=10 Score=38.57 Aligned_cols=35 Identities=31% Similarity=0.508 Sum_probs=27.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|++-.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 3589999999999999987754 364 5889998743
No 289
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=60.94 E-value=4.4 Score=44.87 Aligned_cols=37 Identities=19% Similarity=0.349 Sum_probs=32.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 29 ~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 29 ALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 46689999999999999999999864 76 799999986
No 290
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=60.89 E-value=7.7 Score=38.11 Aligned_cols=33 Identities=24% Similarity=0.440 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4589999999999999988865 363 68899987
No 291
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=60.86 E-value=5.7 Score=38.66 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=26.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
..+|||+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 46899999999999999888652 53 58889884
No 292
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=60.72 E-value=24 Score=32.21 Aligned_cols=91 Identities=9% Similarity=0.131 Sum_probs=52.7
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh--hhhhcc-ccCCCCCHHHHHh
Q 006454 386 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF--KKPWAH-EHEPVKELVDAVN 461 (644)
Q Consensus 386 riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~--k~~fA~-~~~~~~~L~eaV~ 461 (644)
||+|.|| |-.|..+++.|++ .| .++++++++. +.+... ...+.. +..+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 7788888777764 25 4688887741 111111 001111 1111112 6676
Q ss_pred ccCCcEEEEccCCCCCC-------CHHHHHHHHcCCCCcEEEecC
Q 006454 462 AIKPTILIGTSGQGRTF-------TKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 462 ~vkPtvLIG~S~~~g~F-------teevv~~Ma~~~erPIIFaLS 499 (644)
. +|++|=+.+..... ++.++++|.+...+-+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 4 89999887764321 367888887665566776544
No 293
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=60.65 E-value=9 Score=39.13 Aligned_cols=35 Identities=11% Similarity=0.197 Sum_probs=27.3
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
...+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 45789999999999999988865 364 577777653
No 294
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=60.64 E-value=7.6 Score=39.72 Aligned_cols=36 Identities=19% Similarity=0.470 Sum_probs=28.7
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
..+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 345799999999999999988764 364 688999864
No 295
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=60.02 E-value=9.8 Score=36.67 Aligned_cols=88 Identities=20% Similarity=0.280 Sum_probs=54.8
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHH
Q 006454 381 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 459 (644)
Q Consensus 381 ~L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 459 (644)
+-...||++.|| |-.|..+++.|++ .| .+++.+|++ ..| +.+ ..++.++
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-l~d-----------~~~~~~~ 58 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DLD-ITN-----------VLAVNKF 58 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TCC-TTC-----------HHHHHHH
T ss_pred ccccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cCC-CCC-----------HHHHHHH
Confidence 345678999987 7777777766653 24 368888774 111 221 1357777
Q ss_pred HhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 460 VNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
++.+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 59 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 59 FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 877789999988876431 03567777766554 7888554
No 296
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=59.96 E-value=7.8 Score=38.76 Aligned_cols=35 Identities=29% Similarity=0.384 Sum_probs=28.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G-------~~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----EN-------KNTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEeCCCC
Confidence 4689999999999999998875 26 36999998643
No 297
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=59.73 E-value=8 Score=37.94 Aligned_cols=33 Identities=18% Similarity=0.296 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
..+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR-----AQ-------LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----cC-------CcEEEEeCC
Confidence 4689999999999999988764 25 368999987
No 298
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=59.70 E-value=23 Score=32.44 Aligned_cols=50 Identities=12% Similarity=0.197 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 367 VLAGLISAMKFLGGSLADQRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 367 vLAgll~Alr~~g~~L~d~riv~~G-AGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.++..+.+++..+.--.++++++.| +|..|..+++++... | -+++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G-------~~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-----G-------ARIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-----C-------CEEEEEeCC
Confidence 3344444554334444568999999 487787777766532 5 257878763
No 299
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=59.61 E-value=7.1 Score=37.58 Aligned_cols=83 Identities=22% Similarity=0.395 Sum_probs=54.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccC
Q 006454 386 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 464 (644)
Q Consensus 386 riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 464 (644)
||+|.|| |-.|..+++.|++ .| .+++.+|+. .. ++. +..++.++++..+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~-D~~-----------d~~~~~~~~~~~~ 56 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LL-DIT-----------NISQVQQVVQEIR 56 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TS-CTT-----------CHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------cc-CCC-----------CHHHHHHHHHhcC
Confidence 8999996 8788777776653 24 368888871 11 122 1135778888778
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 465 PTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 465 PtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
+|++|=+.+.... .+..+++++.+..-| +||.=|
T Consensus 57 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~v~~SS 106 (287)
T 3sc6_A 57 PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAK-LVYIST 106 (287)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCe-EEEEch
Confidence 9999988776531 034577777766554 887544
No 300
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=59.60 E-value=28 Score=32.82 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=24.8
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
..|+++++||.||++ ||...|+..+.+ .| -+++++|++
T Consensus 10 ~~l~~k~vlITGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAAR---GIGAAAARAYAA-HG-------ASVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEecC
Confidence 357889999999853 344445555544 36 358888874
No 301
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=59.44 E-value=8 Score=38.77 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4689999999999999998875 263 599999874
No 302
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=59.38 E-value=8.6 Score=39.25 Aligned_cols=36 Identities=14% Similarity=0.216 Sum_probs=27.3
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
.+.-+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQ-----SGI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 345689999999999999988865 364 577888754
No 303
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=59.22 E-value=23 Score=34.78 Aligned_cols=97 Identities=20% Similarity=0.168 Sum_probs=53.9
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHhc
Q 006454 385 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 462 (644)
Q Consensus 385 ~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 462 (644)
.||+|.|| |-.|..+++.|++ .| .+++.+|++. +..+.+......+.. +..+..++.++++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~- 76 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALR- 76 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHc-
Confidence 38999996 8888888877764 25 3688888742 111112211111111 1122235777777
Q ss_pred cCCcEEEEccCCCCCC--------------CHHHHHHHHcCCCCcEEEecC
Q 006454 463 IKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 463 vkPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLS 499 (644)
++|++|=+.+..+.. +..+++++.+..-+.|||.=|
T Consensus 77 -~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 77 -GLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp -TCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred -CCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 499999887754311 346777777666567888544
No 304
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=58.99 E-value=14 Score=37.53 Aligned_cols=103 Identities=14% Similarity=0.190 Sum_probs=57.6
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc-hhhhhhcc-ccCCCCCHH
Q 006454 381 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ-HFKKPWAH-EHEPVKELV 457 (644)
Q Consensus 381 ~L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~-~~k~~fA~-~~~~~~~L~ 457 (644)
+++..+|+|.|| |-.|..+++.|++ .|. .+++.+|+.. ....+.+. ..+..+.. +..+..++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~---~~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LGV------NQVHVVDNLL---SAEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TTC------SEEEEECCCT---TCCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cCC------ceEEEEECCC---CCchhhccCCCceEEEECCCCCHHHHH
Confidence 355678999997 7778777777764 251 4688888742 11001121 00111111 111122455
Q ss_pred HHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcC-CCCcEEEecC
Q 006454 458 DAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASL-NEKPIIFSLS 499 (644)
Q Consensus 458 eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~-~erPIIFaLS 499 (644)
++++ ++|++|=+.+.... -|..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 5565 69999988876431 145567777665 4567887544
No 305
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=58.72 E-value=7.8 Score=39.37 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 4689999999999999988865 364 588888764
No 306
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=58.59 E-value=11 Score=36.17 Aligned_cols=77 Identities=13% Similarity=0.150 Sum_probs=40.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhh------c-cccCCC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW------A-HEHEPV 453 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f------A-~~~~~~ 453 (644)
+|+++++||.||++ ||...++..+.+ .| -+++++|++- +.++.....+ . -+..+.
T Consensus 2 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~~ 63 (254)
T 1hdc_A 2 DLSGKTVIITGGAR---GLGAEAARQAVA-AG-------ARVVLADVLD-------EEGAATARELGDAARYQHLDVTIE 63 (254)
T ss_dssp CCCCSEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHTTGGGEEEEECCTTCH
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHhCCceeEEEecCCCH
Confidence 46788999999743 344444444444 36 3588887741 1122111111 0 111122
Q ss_pred CCHHHHHhcc-----CCcEEEEccCCC
Q 006454 454 KELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 454 ~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
.++.++++.+ ++|+||=..+..
T Consensus 64 ~~~~~~~~~~~~~~g~iD~lv~nAg~~ 90 (254)
T 1hdc_A 64 EDWQRVVAYAREEFGSVDGLVNNAGIS 90 (254)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455555544 799999877654
No 307
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=58.59 E-value=8.5 Score=36.97 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=25.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEE-EccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWL-VDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~l-vDs~ 428 (644)
..+|||+|||.||+..|..+.+. |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988753 53 4566 8873
No 308
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=58.38 E-value=8.6 Score=38.48 Aligned_cols=35 Identities=26% Similarity=0.266 Sum_probs=28.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 431 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi 431 (644)
..|+|+|||.+|+.+|-.|.+ .| .++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~-----~G-------~~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAK-----QG-------VKTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCCCC
Confidence 579999999999999998865 25 368999987543
No 309
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=58.33 E-value=10 Score=38.42 Aligned_cols=48 Identities=13% Similarity=0.084 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 367 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 367 vLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
.++..+.|++..+. ..++|+|+|||..|..++.++.. .|. ++++.+|+
T Consensus 153 ~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEP 200 (348)
T ss_dssp HHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 33444556643333 88999999999888776665542 363 46888876
No 310
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=58.31 E-value=21 Score=35.74 Aligned_cols=108 Identities=21% Similarity=0.238 Sum_probs=57.1
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc---cCCCccCCchhh------hhhcc-
Q 006454 380 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI---VSSRLESLQHFK------KPWAH- 448 (644)
Q Consensus 380 ~~L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi---~~~R~~~L~~~k------~~fA~- 448 (644)
..++..+|+|.|| |-.|..+++.|++. ..| -+++.+|+..-- ...+.+.+.... ..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~---~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQEN---HPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHH---CTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhh---CCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 3577889999976 77777777776541 014 468888874210 000001111111 01111
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 449 EHEPVKELVDAVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 449 ~~~~~~~L~eaV~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
+-.+..++.++ ...++|++|=+.+.... -|..+++++.+..-+ |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 11111234444 33479999988775431 134677777766655 888655
No 311
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=58.25 E-value=5.7 Score=38.70 Aligned_cols=99 Identities=11% Similarity=0.121 Sum_probs=58.2
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCc--cCCchhhhhhcc-ccCCCCCHHHH
Q 006454 384 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRL--ESLQHFKKPWAH-EHEPVKELVDA 459 (644)
Q Consensus 384 d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~--~~L~~~k~~fA~-~~~~~~~L~ea 459 (644)
..+|+|.|| |..|..+++.|++. | ..++..++++. ++. ..+......+.+ +-.+..+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 88888888877653 4 13677777741 110 001110111111 11222467788
Q ss_pred HhccCCcEEEEccCCCCC--------CCHHHHHHHHcCCCCcEEEecCC
Q 006454 460 VNAIKPTILIGTSGQGRT--------FTKEVVEAMASLNEKPIIFSLSN 500 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~--------Fteevv~~Ma~~~erPIIFaLSN 500 (644)
++. +|++|-+++.... .++.++++|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 875 8999987653211 2557788887766667888 664
No 312
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=58.16 E-value=9 Score=37.47 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
.+|+|+|||.+|+..|-.|.+ .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999988865 364 588888763
No 313
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=58.13 E-value=19 Score=36.34 Aligned_cols=86 Identities=19% Similarity=0.089 Sum_probs=54.6
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhc
Q 006454 384 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 462 (644)
Q Consensus 384 d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 462 (644)
..||.++|+ |..|.-+++.+.+ .|. +-++.||.+.- +. + .+ ..+-..++.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~-----~g~------~~V~~V~p~~~---g~-~-------~~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIA-----YGT------KMVGGVTPGKG---GT-T-------HL--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-----HTC------EEEEEECTTCT---TC-E-------ET--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----CCC------eEEEEeCCCcc---cc-e-------eC--CeeccCCHHHHhhc
Confidence 468999999 9988777666543 253 35778887411 01 1 00 01113679998885
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEE
Q 006454 463 IKPTILIGTSGQGRTFTKEVVEAMASLNEKPII 495 (644)
Q Consensus 463 vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPII 495 (644)
.+||+.|= .+.+ .+..+++++..+..-+.+|
T Consensus 63 ~~~D~viI-~tP~-~~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 63 TGATASVI-YVPA-PFCKDSILEAIDAGIKLII 93 (288)
T ss_dssp HCCCEEEE-CCCG-GGHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEEE-ecCH-HHHHHHHHHHHHCCCCEEE
Confidence 57998883 3333 5888999988876666533
No 314
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=57.94 E-value=7 Score=39.15 Aligned_cols=35 Identities=20% Similarity=0.348 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
+-.|+|+|||.||+..|-.|.+ .|+ ++.++|++-.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~~ 38 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCC
Confidence 4579999999999999988865 364 5778887653
No 315
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=57.91 E-value=9.1 Score=38.20 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=27.7
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
...+|||+|||.||+..|..+.. .| .++.++|+..
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 47 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGM-----NN-------ISCRIIESMP 47 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEecCC
Confidence 35789999999999999887754 25 3688999863
No 316
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=57.88 E-value=9 Score=37.11 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+|+|+|||.||+..|..+.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 379999999999999988864 253 279999985
No 317
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=57.82 E-value=8.5 Score=40.57 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=26.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
||||+|||.||+-.|..+.+. |. .-+|.|+|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999887643 42 23689998754
No 318
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=57.71 E-value=24 Score=38.15 Aligned_cols=44 Identities=23% Similarity=0.247 Sum_probs=31.1
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 006454 465 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 514 (644)
Q Consensus 465 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~ 514 (644)
-+++|=.|+++--.|+++.+... ++-++| ||...-|-.+..-..
T Consensus 146 g~iVV~~STv~pgtt~~l~~~l~---~~~v~~---sPe~~~~G~A~~~~l 189 (432)
T 3pid_A 146 NAVMIIKSTIPVGFTRDIKERLG---IDNVIF---SPEFLREGRALYDNL 189 (432)
T ss_dssp TSEEEECSCCCTTHHHHHHHHHT---CCCEEE---CCCCCCTTSHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHh---hccEee---cCccCCcchhhhccc
Confidence 35677788887667888877664 345655 888888888876554
No 319
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=57.67 E-value=11 Score=39.06 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=30.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 431 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi 431 (644)
..+|||+|||.||+..|..+.+. |. ..+|.++|+..-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCC
Confidence 46899999999999999988753 53 1369999987644
No 320
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=57.52 E-value=9.2 Score=37.39 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=26.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 4689999999999999988864 253 58899984
No 321
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=57.34 E-value=14 Score=36.39 Aligned_cols=103 Identities=17% Similarity=0.143 Sum_probs=57.6
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCC---CccCCchhhh------hhcc-ccCCC
Q 006454 385 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS---RLESLQHFKK------PWAH-EHEPV 453 (644)
Q Consensus 385 ~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~---R~~~L~~~k~------~fA~-~~~~~ 453 (644)
.+|+|.|| |-.|..+++.|++ .| .+++++|+.---..+ ..+.+...+. .+.. +..+.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 70 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLE-----AG-------YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ 70 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH
Confidence 58999986 7777777777764 25 358888764110000 0000111110 1111 11122
Q ss_pred CCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 454 KELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 454 ~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
.++.++++..++|++|=+.+.... -|..++++|.+..-+.|||.=|
T Consensus 71 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 71 GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 357777876689999988875421 1446778887766567888543
No 322
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=57.31 E-value=14 Score=36.83 Aligned_cols=101 Identities=12% Similarity=0.193 Sum_probs=58.4
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhh----------hhcc-c
Q 006454 382 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----------PWAH-E 449 (644)
Q Consensus 382 L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~----------~fA~-~ 449 (644)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+...+. .+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLK-----LD-------QKVVGLDNFA---TGHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCC---ccchhhHHHHhhhcccccCCceEEEECC
Confidence 45578999998 7778777777764 25 3688888742 111111221111 1111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 450 HEPVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 450 ~~~~~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
..+..++.++++ ++|++|=+.+..+. -|..+++++.+..-+-|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 112235677777 69999998886431 1345677776665566887543
No 323
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=57.21 E-value=15 Score=34.12 Aligned_cols=101 Identities=14% Similarity=0.046 Sum_probs=55.6
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHH
Q 006454 382 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 459 (644)
Q Consensus 382 L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~ea 459 (644)
+...+|+|.|| |-.|..+++.|++ .|- ..++++++++. ++.+.+.. ...+.. +..+..++.++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~-----~~~-----g~~V~~~~r~~----~~~~~~~~-~~~~~~~D~~d~~~~~~~ 66 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKE-----GSD-----KFVAKGLVRSA----QGKEKIGG-EADVFIGDITDADSINPA 66 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHH-----TTT-----TCEEEEEESCH----HHHHHTTC-CTTEEECCTTSHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHh-----cCC-----CcEEEEEEcCC----CchhhcCC-CeeEEEecCCCHHHHHHH
Confidence 34578999996 6667777766654 220 14688887741 10000100 001111 11222457777
Q ss_pred HhccCCcEEEEccCCCCC----------------C-------------CHHHHHHHHcCCCCcEEEecC
Q 006454 460 VNAIKPTILIGTSGQGRT----------------F-------------TKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~----------------F-------------teevv~~Ma~~~erPIIFaLS 499 (644)
++. +|++|=+.+.... | +..++++|.+..-+.|||.=|
T Consensus 67 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 67 FQG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp HTT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HcC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 774 8999977764321 1 467788887665566777533
No 324
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=57.21 E-value=14 Score=40.91 Aligned_cols=38 Identities=11% Similarity=0.236 Sum_probs=30.5
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 431 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi 431 (644)
+++.+|||+|||.||+..|-.|.+ .|+ ++.++|+.-..
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~~ 58 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAFP 58 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCCC
Confidence 567899999999999999987764 363 69999998443
No 325
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=57.21 E-value=9.5 Score=39.01 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=25.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+|+|+|||.||+..|..|.+. | .++.++++..
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G-------~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----G-------KKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----C-------CeEEEEecCC
Confidence 699999999999999988753 5 3577887643
No 326
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=57.16 E-value=19 Score=35.69 Aligned_cols=81 Identities=7% Similarity=0.140 Sum_probs=45.2
Q ss_pred CCCCCCceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc------cc
Q 006454 379 GGSLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA------HE 449 (644)
Q Consensus 379 g~~L~d~riv~~GAGs---AG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA------~~ 449 (644)
..+|+++++||.||++ .|.+||+.+++ .| -+++++|++. ...+.+......+. -|
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D 88 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QG-------AEVALTYLSE----TFKKRVDPLAESLGVKLTVPCD 88 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHHHHHHTCCEEEECC
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CC-------CEEEEEeCCh----HHHHHHHHHHHhcCCeEEEEcC
Confidence 3468889999999963 44446666654 36 3588888751 11111111111110 11
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 450 HEPVKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 450 ~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
..+..++.++++.+ +.|+||=..+..
T Consensus 89 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 89 VSDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 12223455666655 799999877754
No 327
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=57.01 E-value=9.2 Score=36.58 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=54.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHhcc
Q 006454 386 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 463 (644)
Q Consensus 386 riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~v 463 (644)
||+|.|| |-.|..+++.|++. ..| .+++.++++. ++.+.+......+.. +-.+..++.++++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5889997 77777777776531 002 3588887641 111101110111111 11222457777775
Q ss_pred CCcEEEEccCCCC----CCCHHHHHHHHcCCCCcEEEecC
Q 006454 464 KPTILIGTSGQGR----TFTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 464 kPtvLIG~S~~~g----~Fteevv~~Ma~~~erPIIFaLS 499 (644)
+|++|=+++... ..++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 799998876421 23788899998766667887543
No 328
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=57.00 E-value=38 Score=34.28 Aligned_cols=98 Identities=13% Similarity=0.132 Sum_probs=56.7
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHh
Q 006454 384 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVN 461 (644)
Q Consensus 384 d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~ 461 (644)
..+|+|.|| |-.|..+++.|++ .| .+++.+|++- .....+......+.. +..+..++.++++
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVTE 92 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHHT
T ss_pred CCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHhC
Confidence 468999998 7777777777754 25 3688888742 111111111111111 1122235777776
Q ss_pred ccCCcEEEEccCCCCC--C---------------CHHHHHHHHcCCCCcEEEecC
Q 006454 462 AIKPTILIGTSGQGRT--F---------------TKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 462 ~vkPtvLIG~S~~~g~--F---------------teevv~~Ma~~~erPIIFaLS 499 (644)
++|++|=+.+.... + |..+++++.+..-+.|||.=|
T Consensus 93 --~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 93 --GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp --TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred --CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 59999988875432 1 345677776665567887544
No 329
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=56.90 E-value=10 Score=39.96 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999987764 25 379999986
No 330
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=56.90 E-value=14 Score=36.10 Aligned_cols=78 Identities=12% Similarity=0.135 Sum_probs=43.7
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc-------cccCC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-------HEHEP 452 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-------~~~~~ 452 (644)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++ . +.+......+. -|..+
T Consensus 7 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~Dv~~ 68 (271)
T 3tzq_B 7 AELENKVAIITGACG---GIGLETSRVLAR-AG-------ARVVLADLP----E---TDLAGAAASVGRGAVHHVVDLTN 68 (271)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECT----T---SCHHHHHHHHCTTCEEEECCTTC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEcCC----H---HHHHHHHHHhCCCeEEEECCCCC
Confidence 367889999999753 344444444444 36 358888874 1 12333222221 01122
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 453 VKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 453 ~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
..++.++++.+ +.|+||=..+..
T Consensus 69 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 69 EVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455566554 799999877754
No 331
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=56.88 E-value=9.4 Score=45.65 Aligned_cols=37 Identities=24% Similarity=0.404 Sum_probs=33.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 24 rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 24 KMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 57789999999999999999999876 76 799999986
No 332
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=56.87 E-value=11 Score=40.47 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=28.1
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
...+|+|+|+|.||+..|..|... |. ++.++|+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecc
Confidence 457899999999999999998753 53 58899885
No 333
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=56.83 E-value=7.3 Score=41.08 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=27.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
..+|||+|||.||+..|..|.+.- .| .+|.++|+..-
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~---~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD---PE-------AHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC---TT-------SEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCc
Confidence 468999999999999999886530 12 47888988644
No 334
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=56.45 E-value=11 Score=37.94 Aligned_cols=36 Identities=14% Similarity=0.271 Sum_probs=28.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+..|+|+|||.+|+.+|-.|.+. .|. .++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 46899999999999999988751 151 3699999875
No 335
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=56.45 E-value=11 Score=36.08 Aligned_cols=37 Identities=24% Similarity=0.251 Sum_probs=22.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+|+++++||.||+. ||...++..+.+ .|. +++++|++
T Consensus 1 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G~-------~V~~~~r~ 37 (255)
T 2q2v_A 1 TLKGKTALVTGSTS---GIGLGIAQVLAR-AGA-------NIVLNGFG 37 (255)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEECSS
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 36678999999843 344444444444 363 58888764
No 336
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=56.45 E-value=10 Score=39.11 Aligned_cols=37 Identities=24% Similarity=0.321 Sum_probs=29.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 431 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi 431 (644)
+..|||+|||.+|+..|-.|.+ .|. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 4579999999999999988865 364 379999987553
No 337
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=56.08 E-value=9.2 Score=39.77 Aligned_cols=112 Identities=14% Similarity=0.174 Sum_probs=51.0
Q ss_pred HHHHHHhCCCCCC-ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcccc
Q 006454 372 ISAMKFLGGSLAD-QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH 450 (644)
Q Consensus 372 l~Alr~~g~~L~d-~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~ 450 (644)
|+.-.+....+++ .||-|+|+|..|..-++.+...-.....+. +-.+=+-++|++ . +....+.+.|--.
T Consensus 13 ~~~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~--~~~elvav~d~~----~---~~a~~~a~~~~~~- 82 (412)
T 4gqa_A 13 LGTENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLP--KRPHLYALADQD----Q---AMAERHAAKLGAE- 82 (412)
T ss_dssp ------------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSS--SEEEEEEEECSS----H---HHHHHHHHHHTCS-
T ss_pred cccccCccccccccceEEEEcCcHHHHHHHHHHHhccccccccC--CCeEEEEEEcCC----H---HHHHHHHHHcCCC-
Confidence 4444455556665 599999999888665555544311100010 001223456652 1 1122222222110
Q ss_pred CCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHc----CCCCcE
Q 006454 451 EPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMAS----LNEKPI 494 (644)
Q Consensus 451 ~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~----~~erPI 494 (644)
.-..++.|.++.-++|+++ +++....=-+-++++|.+ .+|+|+
T Consensus 83 ~~y~d~~~ll~~~~vD~V~-I~tp~~~H~~~~~~al~aGkhVl~EKP~ 129 (412)
T 4gqa_A 83 KAYGDWRELVNDPQVDVVD-ITSPNHLHYTMAMAAIAAGKHVYCEKPL 129 (412)
T ss_dssp EEESSHHHHHHCTTCCEEE-ECSCGGGHHHHHHHHHHTTCEEEEESCS
T ss_pred eEECCHHHHhcCCCCCEEE-ECCCcHHHHHHHHHHHHcCCCeEeecCC
Confidence 1136899999988899877 666553323444445543 345554
No 338
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=56.00 E-value=8.5 Score=38.19 Aligned_cols=101 Identities=12% Similarity=0.174 Sum_probs=60.3
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhh----------hhcc-c
Q 006454 382 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----------PWAH-E 449 (644)
Q Consensus 382 L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~----------~fA~-~ 449 (644)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+...+. .+.. +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45689999996 8888888877764 25 46888887421 11111111111 1111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 450 HEPVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 450 ~~~~~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
..+..++.++++ ++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 122235777777 69999988875421 1345788888777778998633
No 339
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=55.92 E-value=10 Score=39.70 Aligned_cols=36 Identities=17% Similarity=0.299 Sum_probs=28.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
...+|+|+|||.||+..|..|.+ .|.. .++.++|+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecC
Confidence 35689999999999999988864 3541 378899886
No 340
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=55.90 E-value=36 Score=32.99 Aligned_cols=76 Identities=11% Similarity=0.018 Sum_probs=41.5
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHH
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAV 460 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV 460 (644)
++++++||.||++ ||...++..+.+ .| -+++++|++- .+ +...+..+.. +..+..++.+++
T Consensus 26 ~~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~~~~~~~Dv~d~~~v~~~~ 87 (260)
T 3un1_A 26 NQQKVVVITGASQ---GIGAGLVRAYRD-RN-------YRVVATSRSI----KP---SADPDIHTVAGDISKPETADRIV 87 (260)
T ss_dssp TTCCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----CC---CSSTTEEEEESCTTSHHHHHHHH
T ss_pred cCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----hh---cccCceEEEEccCCCHHHHHHHH
Confidence 5678899999753 344444444444 36 3688888751 11 1111111111 222223455556
Q ss_pred hcc-----CCcEEEEccCCC
Q 006454 461 NAI-----KPTILIGTSGQG 475 (644)
Q Consensus 461 ~~v-----kPtvLIG~S~~~ 475 (644)
+.+ ++|+||=..+..
T Consensus 88 ~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 88 REGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHCCCCCEEEECCCCC
Confidence 654 799999877654
No 341
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=55.67 E-value=12 Score=37.43 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=27.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4689999999999999988854 35 4699999764
No 342
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=55.66 E-value=39 Score=36.49 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
..||.|+|+|.-|+.+|..+++. | .+++++|.+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-----G-------~~V~~~D~~ 40 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-----G-------HEVVCVDKD 40 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 46999999999999999998763 5 468888874
No 343
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=55.56 E-value=11 Score=37.98 Aligned_cols=33 Identities=15% Similarity=0.362 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
.+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999888653 64 578888764
No 344
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=55.43 E-value=28 Score=33.49 Aligned_cols=78 Identities=23% Similarity=0.277 Sum_probs=43.2
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc----------c
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------E 449 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----------~ 449 (644)
.+|+++++||.||++ ||...++..+.++ | -+++++|++- +.++.....+.. +
T Consensus 8 ~~l~~k~vlVTGas~---gIG~~ia~~l~~~-G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D 69 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAA---GIGRAIAGTFAKA-G-------ASVVVTDLKS-------EGAEAVAAAIRQAGGKAIGLECN 69 (256)
T ss_dssp TCCTTCEEEECSCSS---HHHHHHHHHHHHH-T-------CEEEEEESSH-------HHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCCEEEEECCCC---HHHHHHHHHHHHC-C-------CEEEEEeCCH-------HHHHHHHHHHHhcCCcEEEEECC
Confidence 457889999999864 4444455555442 6 3588888741 112222211111 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 450 HEPVKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 450 ~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
..+..++.++++.+ ++|+||=..+..
T Consensus 70 v~d~~~v~~~~~~~~~~~g~id~lv~nAg~~ 100 (256)
T 3gaf_A 70 VTDEQHREAVIKAALDQFGKITVLVNNAGGG 100 (256)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11223455555554 799999877654
No 345
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=55.40 E-value=9.4 Score=38.02 Aligned_cols=35 Identities=11% Similarity=0.300 Sum_probs=28.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 431 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi 431 (644)
..|+|+|||.+|+.+|-.|.+ .|+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~-----~G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATR-----AGL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCCCC
Confidence 479999999999999988875 263 58999987543
No 346
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=55.32 E-value=11 Score=39.40 Aligned_cols=36 Identities=19% Similarity=0.351 Sum_probs=27.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
.+|||+|||.||+..|..|.+.+.. | -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~--g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS--G-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG--G-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC--c-------CEEEEEeCCC
Confidence 5899999999999999998764311 2 4688888754
No 347
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=55.28 E-value=13 Score=38.24 Aligned_cols=87 Identities=13% Similarity=0.139 Sum_probs=51.9
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccc-cCCCCCHHHHHh
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVN 461 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~eaV~ 461 (644)
+..||.|+|+|..|..+|..+.. .|. +++++|+.. .+ .. ..++. .-...++.|+++
T Consensus 15 ~~~~I~IIG~G~mG~alA~~L~~-----~G~-------~V~~~~~~~----~~--~~-----~~a~~~G~~~~~~~e~~~ 71 (338)
T 1np3_A 15 QGKKVAIIGYGSQGHAHACNLKD-----SGV-------DVTVGLRSG----SA--TV-----AKAEAHGLKVADVKTAVA 71 (338)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECCTT----CH--HH-----HHHHHTTCEEECHHHHHH
T ss_pred cCCEEEEECchHHHHHHHHHHHH-----CcC-------EEEEEECCh----HH--HH-----HHHHHCCCEEccHHHHHh
Confidence 35689999999999999988864 253 477777641 10 01 11111 001127888887
Q ss_pred ccCCcEEEEccCCCCCCCHHHHH-HHHcCC-CCcEEE
Q 006454 462 AIKPTILIGTSGQGRTFTKEVVE-AMASLN-EKPIIF 496 (644)
Q Consensus 462 ~vkPtvLIG~S~~~g~Fteevv~-~Ma~~~-erPIIF 496 (644)
. +|++| ++..... .+++++ .++.+. +..+|.
T Consensus 72 ~--aDvVi-lavp~~~-~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 72 A--ADVVM-ILTPDEF-QGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp T--CSEEE-ECSCHHH-HHHHHHHHTGGGCCTTCEEE
T ss_pred c--CCEEE-EeCCcHH-HHHHHHHHHHhhCCCCCEEE
Confidence 5 88877 4444433 378887 665433 334444
No 348
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=55.21 E-value=38 Score=35.47 Aligned_cols=131 Identities=7% Similarity=0.033 Sum_probs=87.9
Q ss_pred HHHhcCCCccceecccCCCCcHHHHHHHHcCCCceee--cCCcchHHHHHHHHHHHHHHhC------CCCCCceEEEeCc
Q 006454 321 VKQNYGERILIQVFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLG------GSLADQRFLFLGA 392 (644)
Q Consensus 321 v~~~fGp~~lIq~fEDf~~~nAf~lL~ryr~~~~~FN--DDiQGTaaVvLAgll~Alr~~g------~~L~d~riv~~GA 392 (644)
+-.+| .++++ .-.+. +.+.+.|.+|- ++||.| || .--=.=+||=++.=.+..| +++++.||.++|-
T Consensus 96 vls~~-~D~iv--iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD 169 (328)
T 3grf_A 96 VFSRM-VDICT--ARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGD 169 (328)
T ss_dssp HHTTT-CSEEE--EECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESC
T ss_pred HHHhh-CCEEE--EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCC
Confidence 44567 66654 35654 35556667764 689999 66 5566678888888777777 3799999999999
Q ss_pred ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccc---c---CCCCCHHHHHhccCCc
Q 006454 393 GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE---H---EPVKELVDAVNAIKPT 466 (644)
Q Consensus 393 GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~---~---~~~~~L~eaV~~vkPt 466 (644)
+.- .+|+-++.++.+ .|+ +|.++-.+|+..+-. +.+...-+.+|.. + ....++.|+|+. .|
T Consensus 170 ~~~--~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~--aD 236 (328)
T 3grf_A 170 SMN--NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPI-KEVIDECEEIIAKHGTGGSIKIFHDCKKGCEG--VD 236 (328)
T ss_dssp CSS--HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCC-HHHHHHHHHHHHHHTCCCEEEEESSHHHHHTT--CS
T ss_pred CCc--chHHHHHHHHHH-cCC-------EEEEECChHhhhCCC-HHHHHHHHHHHhhccCCCeEEEEcCHHHHhcC--CC
Confidence 852 578888887766 474 689999998863211 1122222233322 1 123689999997 99
Q ss_pred EEEE
Q 006454 467 ILIG 470 (644)
Q Consensus 467 vLIG 470 (644)
|+.-
T Consensus 237 vvyt 240 (328)
T 3grf_A 237 VVYT 240 (328)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9974
No 349
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=55.05 E-value=10 Score=40.25 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+.+++|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LG-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 4689999999999999988865 35 4689999754
No 350
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=55.03 E-value=8.3 Score=38.37 Aligned_cols=91 Identities=5% Similarity=0.099 Sum_probs=49.6
Q ss_pred CCCceEEEeCcChHHHH-HHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHH
Q 006454 382 LADQRFLFLGAGEAGTG-IAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 460 (644)
Q Consensus 382 L~d~riv~~GAGsAG~G-IA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 460 (644)
++..||.|+|+|..|.. .++.+.. ..|. +-+.++|++ .+......+.|- .+...++.|++
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~----~~~~------~l~av~d~~-------~~~~~~~a~~~~--~~~~~~~~~ll 64 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTK----SERF------EFVGAFTPN-------KVKREKICSDYR--IMPFDSIESLA 64 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTS----CSSS------EEEEEECSC-------HHHHHHHHHHHT--CCBCSCHHHHH
T ss_pred cccCcEEEEecCHHHHHHHHHHHHh----CCCe------EEEEEECCC-------HHHHHHHHHHcC--CCCcCCHHHHH
Confidence 34579999999998865 5554432 1121 223367763 111222322331 12257899999
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 006454 461 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 496 (644)
Q Consensus 461 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 496 (644)
+ ++|+++ +++... ...+++....+ ..++++.
T Consensus 65 ~--~~D~V~-i~tp~~-~h~~~~~~al~-~gk~vl~ 95 (308)
T 3uuw_A 65 K--KCDCIF-LHSSTE-THYEIIKILLN-LGVHVYV 95 (308)
T ss_dssp T--TCSEEE-ECCCGG-GHHHHHHHHHH-TTCEEEE
T ss_pred h--cCCEEE-EeCCcH-hHHHHHHHHHH-CCCcEEE
Confidence 8 799988 555553 45555544333 2355553
No 351
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=55.02 E-value=35 Score=32.63 Aligned_cols=77 Identities=13% Similarity=0.177 Sum_probs=40.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhh------cc-ccCCC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW------AH-EHEPV 453 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f------A~-~~~~~ 453 (644)
+++++++||.||++ ||...++..+.+ .| -+++++|++- .+ +......+ .. |..+.
T Consensus 4 ~l~~k~~lVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~Dv~~~ 65 (257)
T 3tpc_A 4 QLKSRVFIVTGASS---GLGAAVTRMLAQ-EG-------ATVLGLDLKP----PA---GEEPAAELGAAVRFRNADVTNE 65 (257)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESSC----C---------------CEEEECCTTCH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----HH---HHHHHHHhCCceEEEEccCCCH
Confidence 57788999999853 344445555544 36 3588888741 11 21111111 11 11222
Q ss_pred CCHHHHHhcc-----CCcEEEEccCCC
Q 006454 454 KELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 454 ~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
.++.++++.+ +.|+||=..+..
T Consensus 66 ~~v~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 66 ADATAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455566554 799999776654
No 352
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=54.78 E-value=16 Score=38.00 Aligned_cols=91 Identities=8% Similarity=0.114 Sum_probs=52.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhcc-
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI- 463 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v- 463 (644)
.||.|+|+|..|..+|..|... | .+++++|++- +.+...+. .......++.|+++..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~~-------~~~~~a~~---~G~~~~~~~~e~~~~a~ 66 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRSR-------SGAKSAVD---EGFDVSADLEATLQRAA 66 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSCH-------HHHHHHHH---TTCCEESCHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCCH-------HHHHHHHH---cCCeeeCCHHHHHHhcc
Confidence 5899999999999999888753 5 3688888741 11111110 0011124677776542
Q ss_pred -CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 006454 464 -KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 464 -kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 499 (644)
.+|++| ++.... -++++++.++.+.+.-||.=++
T Consensus 67 ~~aDlVi-lavP~~-~~~~vl~~l~~~~~~~iv~Dv~ 101 (341)
T 3ktd_A 67 AEDALIV-LAVPMT-AIDSLLDAVHTHAPNNGFTDVV 101 (341)
T ss_dssp HTTCEEE-ECSCHH-HHHHHHHHHHHHCTTCCEEECC
T ss_pred cCCCEEE-EeCCHH-HHHHHHHHHHccCCCCEEEEcC
Confidence 467666 344332 4667777766554444554443
No 353
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=54.45 E-value=27 Score=35.82 Aligned_cols=92 Identities=21% Similarity=0.307 Sum_probs=53.4
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccC
Q 006454 359 DIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES 438 (644)
Q Consensus 359 DiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~ 438 (644)
+.++.....++..+.|++..+.+ .+++++|.|||..|...+.+... .|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~---------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLARL-----AGA------TTVILSTRQ---------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC----------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----------
Confidence 34454444556666677665544 46799999998777655444332 464 578888763
Q ss_pred Cchhhhhhccc-------cCCCCCHHHHHhc---c---CCcEEEEccCC
Q 006454 439 LQHFKKPWAHE-------HEPVKELVDAVNA---I---KPTILIGTSGQ 474 (644)
Q Consensus 439 L~~~k~~fA~~-------~~~~~~L~eaV~~---v---kPtvLIG~S~~ 474 (644)
+.+..+|++ .....++.+.++. . +.|++|=+++.
T Consensus 217 --~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~ 263 (370)
T 4ej6_A 217 --ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGV 263 (370)
T ss_dssp --HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCC
T ss_pred --HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCC
Confidence 222333332 1112467777665 2 57888887663
No 354
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=54.45 E-value=12 Score=35.73 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=26.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+.+|+|+|||.||+-.|..+.+ .| .++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-----~g-------~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-----KG-------VRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 4679999999999999988865 25 368888875
No 355
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=54.44 E-value=14 Score=40.23 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=20.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+++++++||.|||.+|.++|..+.+ .|. +++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~-----~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKE-----KGA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHH-----HCC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 5778899999998666666555543 252 58888774
No 356
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=54.26 E-value=10 Score=38.06 Aligned_cols=89 Identities=18% Similarity=0.239 Sum_probs=50.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 464 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 464 (644)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ .+......+.|- .. ..++.|+++.-+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~-------~~~~~~~~~~~~--~~-~~~~~~~l~~~~ 63 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSG----NADA------RLVAVADAF-------PAAAEAIAGAYG--CE-VRTIDAIEAAAD 63 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS-------HHHHHHHHHHTT--CE-ECCHHHHHHCTT
T ss_pred eEEEEECCCHHHHHHHHHHhh----CCCc------EEEEEECCC-------HHHHHHHHHHhC--CC-cCCHHHHhcCCC
Confidence 589999999988776665543 1121 223366763 111222222221 12 678999999777
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 006454 465 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 496 (644)
Q Consensus 465 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 496 (644)
+|+++ +++.. ....++++...+. .++|+.
T Consensus 64 ~D~V~-i~tp~-~~h~~~~~~al~~-gk~v~~ 92 (331)
T 4hkt_A 64 IDAVV-ICTPT-DTHADLIERFARA-GKAIFC 92 (331)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCEEE-EeCCc-hhHHHHHHHHHHc-CCcEEE
Confidence 89887 44444 4455555544332 355553
No 357
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=54.02 E-value=9.3 Score=40.37 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=28.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
++.++||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35789999999999999988854 25 3699999864
No 358
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.02 E-value=13 Score=39.05 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g-------~~V~liE~~ 38 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----G-------FKTTCIEKR 38 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCC
Confidence 46799999999999999887653 5 368999986
No 359
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=53.98 E-value=10 Score=36.19 Aligned_cols=78 Identities=27% Similarity=0.338 Sum_probs=43.9
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc-------cccCC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-------HEHEP 452 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-------~~~~~ 452 (644)
.+++++++||.||++ ||...++..+.+ .| -+++++|++- +.++..+..+. -+..+
T Consensus 5 m~l~~k~vlITGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~ 66 (261)
T 3n74_A 5 MSLEGKVALITGAGS---GFGEGMAKRFAK-GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADISK 66 (261)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTTS
T ss_pred ccCCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCCC
Confidence 467889999999864 333444444443 36 3588888741 12222222221 11122
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 453 VKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 453 ~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
..++.++++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 67 EADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 23456666655 899999877754
No 360
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=53.98 E-value=11 Score=40.46 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.||.|+|+|..|..+|..++.. | .+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 4899999999999999988753 5 368888874
No 361
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=53.92 E-value=12 Score=37.99 Aligned_cols=35 Identities=14% Similarity=0.307 Sum_probs=28.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 431 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi 431 (644)
..|||+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 579999999999999988865 363 58999987554
No 362
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=53.81 E-value=12 Score=40.89 Aligned_cols=35 Identities=26% Similarity=0.297 Sum_probs=28.9
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999998864 364 589999874
No 363
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=53.80 E-value=9.2 Score=37.44 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=26.8
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
...+|+|+|||.||+..|..|.+. |+ ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 346899999999999999988652 53 5788987
No 364
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=53.66 E-value=20 Score=33.87 Aligned_cols=101 Identities=19% Similarity=0.174 Sum_probs=55.5
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHH
Q 006454 382 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 459 (644)
Q Consensus 382 L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~ea 459 (644)
..-.+|+|.|| |-.|..|++.|++ .|- -++++++++. ++...+......+.+ +..+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 33468999995 6677777766653 241 3677777642 111111111111111 22223467778
Q ss_pred HhccCCcEEEEccCCCCC--CCHHHHHHHHcCCCCcEEEecC
Q 006454 460 VNAIKPTILIGTSGQGRT--FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 460 V~~vkPtvLIG~S~~~g~--Fteevv~~Ma~~~erPIIFaLS 499 (644)
++. .|++|=+.+.... -++.++++|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 875 7999966654332 2567888887665555666444
No 365
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=53.62 E-value=49 Score=31.64 Aligned_cols=76 Identities=20% Similarity=0.252 Sum_probs=42.2
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc-cccCCCCCHHH
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-HEHEPVKELVD 458 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~e 458 (644)
..++++++||.||++ ||...++..+.+ .| -+++++|++. +.+......+. -+. ..++.+
T Consensus 15 ~~~~~k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~D~--~~~~~~ 74 (249)
T 1o5i_A 15 LGIRDKGVLVLAASR---GIGRAVADVLSQ-EG-------AEVTICARNE-------ELLKRSGHRYVVCDL--RKDLDL 74 (249)
T ss_dssp -CCTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHTCSEEEECCT--TTCHHH
T ss_pred hccCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEcCCH-------HHHHhhCCeEEEeeH--HHHHHH
Confidence 457889999999853 344444444444 36 3588888753 00111000111 111 235666
Q ss_pred HHhcc-CCcEEEEccCCC
Q 006454 459 AVNAI-KPTILIGTSGQG 475 (644)
Q Consensus 459 aV~~v-kPtvLIG~S~~~ 475 (644)
+++.+ +.|+||=..+..
T Consensus 75 ~~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 75 LFEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHHSCCCSEEEECCCCC
T ss_pred HHHHhcCCCEEEECCCCC
Confidence 66666 799999877754
No 366
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=53.58 E-value=55 Score=31.68 Aligned_cols=76 Identities=17% Similarity=0.279 Sum_probs=41.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHH
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 460 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 460 (644)
+|++.++||.||+. ||...|+..+.+ .| -+++++|++. .+.......+ -+..+..++.+++
T Consensus 5 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~~~~~~~~~----~Dl~~~~~v~~~~ 65 (264)
T 2dtx_A 5 DLRDKVVIVTGASM---GIGRAIAERFVD-EG-------SKVIDLSIHD----PGEAKYDHIE----CDVTNPDQVKASI 65 (264)
T ss_dssp GGTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----CCSCSSEEEE----CCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEecCc----ccCCceEEEE----ecCCCHHHHHHHH
Confidence 36678899999753 444555555544 36 3688888742 1111111111 1111223455555
Q ss_pred hcc-----CCcEEEEccCCC
Q 006454 461 NAI-----KPTILIGTSGQG 475 (644)
Q Consensus 461 ~~v-----kPtvLIG~S~~~ 475 (644)
+.+ ++|+||=..+..
T Consensus 66 ~~~~~~~g~iD~lv~~Ag~~ 85 (264)
T 2dtx_A 66 DHIFKEYGSISVLVNNAGIE 85 (264)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 544 799999877654
No 367
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=53.43 E-value=11 Score=40.00 Aligned_cols=38 Identities=16% Similarity=0.288 Sum_probs=27.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+|+|+|||.||+..|..+.+.. ..|+.. .++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~~----~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAEI----PELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCCC----CEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCCC----CcEEEEEcC
Confidence 58999999999999999987632 135420 138888876
No 368
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=53.28 E-value=11 Score=39.83 Aligned_cols=33 Identities=30% Similarity=0.498 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999988865 25 469999986
No 369
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=53.19 E-value=42 Score=32.90 Aligned_cols=78 Identities=19% Similarity=0.264 Sum_probs=45.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc----------c
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------E 449 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----------~ 449 (644)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++ . +.++..+..+.. |
T Consensus 28 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~D 89 (276)
T 3r1i_A 28 FDLSGKRALITGAST---GIGKKVALAYAE-AG-------AQVAVAARH----S---DALQVVADEIAGVGGKALPIRCD 89 (276)
T ss_dssp GCCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESS----G---GGGHHHHHHHHHTTCCCEEEECC
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC----H---HHHHHHHHHHHhcCCeEEEEEcC
Confidence 367889999999754 444455555544 36 368888874 1 223333322221 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 450 HEPVKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 450 ~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
-.+..++.++++.+ ++|+||=..+..
T Consensus 90 l~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11223456666655 799999777654
No 370
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=53.16 E-value=11 Score=39.56 Aligned_cols=36 Identities=14% Similarity=0.243 Sum_probs=27.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
..+|||+|||.||+..|..|.+. +- ..++.++|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCC
Confidence 46899999999999999888653 21 14688888764
No 371
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=53.15 E-value=18 Score=35.42 Aligned_cols=82 Identities=20% Similarity=0.253 Sum_probs=40.7
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHH
Q 006454 379 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELV 457 (644)
Q Consensus 379 g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~ 457 (644)
+.++.++++||.||++ ||...++..+.+ .|. +++++|++- ++.+.+...+..+.. +..+..++.
T Consensus 11 ~~~~~~k~vlVTGas~---gIG~aia~~l~~-~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~Dv~d~~~v~ 75 (266)
T 3p19_A 11 GRGSMKKLVVITGASS---GIGEAIARRFSE-EGH-------PLLLLARRV----ERLKALNLPNTLCAQVDVTDKYTFD 75 (266)
T ss_dssp ----CCCEEEEESTTS---HHHHHHHHHHHH-TTC-------CEEEEESCH----HHHHTTCCTTEEEEECCTTCHHHHH
T ss_pred CCCCCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEECCH----HHHHHhhcCCceEEEecCCCHHHHH
Confidence 3457788999999753 444455555544 363 588888741 110111111111111 212223455
Q ss_pred HHHhcc-----CCcEEEEccCCC
Q 006454 458 DAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 458 eaV~~v-----kPtvLIG~S~~~ 475 (644)
++++.+ ++|+||=..+..
T Consensus 76 ~~~~~~~~~~g~iD~lvnnAg~~ 98 (266)
T 3p19_A 76 TAITRAEKIYGPADAIVNNAGMM 98 (266)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHHCCCCCEEEECCCcC
Confidence 556544 789999777654
No 372
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=53.11 E-value=28 Score=33.35 Aligned_cols=80 Identities=11% Similarity=0.084 Sum_probs=43.8
Q ss_pred CCCCCceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc--------c
Q 006454 380 GSLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA--------H 448 (644)
Q Consensus 380 ~~L~d~riv~~GAGs---AG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA--------~ 448 (644)
.++++.++||.||+. .|..+|+.+++ .|. +++++|+.. ...+.+......+. -
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~ 66 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHE-----AGA-------RLIFTYAGE----RLEKSVHELAGTLDRNDSIILPC 66 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESSG----GGHHHHHHHHHTSSSCCCEEEEC
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHH-----CCC-------EEEEecCch----HHHHHHHHHHHhcCCCCceEEeC
Confidence 357889999999853 45556666653 363 588888751 11011111111111 1
Q ss_pred ccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 449 EHEPVKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 449 ~~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
|..+..++.++++.+ +.|+||=..+..
T Consensus 67 D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 67 DVTNDAEIETCFASIKEQVGVIHGIAHCIAFA 98 (266)
T ss_dssp CCSSSHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCeeEEEEccccc
Confidence 222223466666655 789999877754
No 373
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=52.89 E-value=11 Score=37.25 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=29.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+|++.++|++|+|..|..-+++|+.+ | -++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 57889999999999999998888753 4 358888874
No 374
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=52.71 E-value=36 Score=32.58 Aligned_cols=38 Identities=24% Similarity=0.383 Sum_probs=24.5
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
..|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~ 45 (252)
T 3f1l_A 8 DLLNDRIILVTGASD---GIGREAAMTYAR-YG-------ATVILLGRN 45 (252)
T ss_dssp TTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 457889999999754 344444444444 36 368888874
No 375
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=52.60 E-value=6.2 Score=42.74 Aligned_cols=32 Identities=16% Similarity=0.318 Sum_probs=25.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.||||+|+|.||+-.|+.|.. .+ -+|.|+|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999988876632 12 369999985
No 376
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=52.54 E-value=70 Score=33.74 Aligned_cols=131 Identities=18% Similarity=0.234 Sum_probs=84.9
Q ss_pred HHHhcCCCccceecccCCCCcHHHHHHHHcCCCceee--cCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHH
Q 006454 321 VKQNYGERILIQVFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTG 398 (644)
Q Consensus 321 v~~~fGp~~lIq~fEDf~~~nAf~lL~ryr~~~~~FN--DDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~G 398 (644)
+-.+| .++++ .-.+. +.+.+.|.+|- ++||.| || .--=.=+||=++.-.+..| ++++.||+++|-| . -
T Consensus 121 vLs~y-~D~Iv--iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~-~--n 190 (340)
T 4ep1_A 121 VLSHY-IDGIM--IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDG-N--N 190 (340)
T ss_dssp HHHHH-CSEEE--EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC-C--H
T ss_pred HHHHh-CCEEE--EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCC-c--h
Confidence 44556 56554 35553 35556666764 689999 55 4445667788777666666 5999999999998 2 3
Q ss_pred HHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccc-c---CCCCCHHHHHhccCCcEEEEccCC
Q 006454 399 IAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-H---EPVKELVDAVNAIKPTILIGTSGQ 474 (644)
Q Consensus 399 IA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~---~~~~~L~eaV~~vkPtvLIG~S~~ 474 (644)
+|+-++.++.+ .|+ +|.++-.+|+.-.. .+-..-+.+|+. + ....++.|+|+. .||+.-..=+
T Consensus 191 va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w~ 257 (340)
T 4ep1_A 191 VCHSLLLASAK-VGM-------HMTVATPVGYRPNE---EIVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVWM 257 (340)
T ss_dssp HHHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC-
T ss_pred hHHHHHHHHHH-cCC-------EEEEECCcccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCcc
Confidence 78888877766 474 68899888875321 111122233332 1 123689999997 9999876543
No 377
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=52.54 E-value=15 Score=38.72 Aligned_cols=30 Identities=23% Similarity=0.461 Sum_probs=24.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
||.|+|+|..|..+|..+.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999887752 3 368888874
No 378
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=52.43 E-value=12 Score=35.42 Aligned_cols=38 Identities=18% Similarity=0.265 Sum_probs=25.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.++++.++||.||.. ||...++..+.+ .| -+++++|++
T Consensus 2 ~~~~~k~vlVtGasg---giG~~~a~~l~~-~G-------~~V~~~~r~ 39 (251)
T 1zk4_A 2 NRLDGKVAIITGGTL---GIGLAIATKFVE-EG-------AKVMITGRH 39 (251)
T ss_dssp CTTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCcEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357788999999743 455555555554 35 358888874
No 379
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=52.40 E-value=27 Score=33.93 Aligned_cols=92 Identities=15% Similarity=0.202 Sum_probs=49.1
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhc
Q 006454 384 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 462 (644)
Q Consensus 384 d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 462 (644)
..+|+|.|| |-.|..+++.|++ .| .+++.+|+. +.. + ..+.-+..+..++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~~---~--~~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NN-------WHAVGCGFR------RAR---P--KFEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEccC------CCC---C--CeEEecCCCHHHHHHHHHh
Confidence 358999998 7778777777753 25 368887753 111 0 1111122223467788887
Q ss_pred cCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 463 IKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 463 vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
+++|++|=+.+.... -|..+++++.+..- .|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 789999988775421 03457777765543 6777543
No 380
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=52.30 E-value=38 Score=32.72 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=23.1
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+++.++||.||.. ||...|+..+.+ .|. +++++|++
T Consensus 30 l~~k~vlVTGasg---gIG~~la~~l~~-~G~-------~V~~~~r~ 65 (279)
T 1xg5_A 30 WRDRLALVTGASG---GIGAAVARALVQ-QGL-------KVVGCART 65 (279)
T ss_dssp GTTCEEEEESTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred cCCCEEEEECCCc---hHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 6778999998743 444455555544 363 58888874
No 381
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=52.17 E-value=55 Score=31.80 Aligned_cols=37 Identities=22% Similarity=0.411 Sum_probs=25.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 3 ~l~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 39 (274)
T 3e03_A 3 TLSGKTLFITGASR---GIGLAIALRAAR-DG-------ANVAIAAKS 39 (274)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCcEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEecc
Confidence 57889999999864 455555555554 36 368999885
No 382
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=52.13 E-value=17 Score=36.82 Aligned_cols=58 Identities=16% Similarity=0.106 Sum_probs=35.5
Q ss_pred cCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 358 DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 358 DDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
++.++.....++..+.|++..+.+ ..++|+|+|||..|...+.+.. + .|. ++++.+|+
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGVR-LGDPVLICGAGPIGLITMLCAK-A----AGA------CPLVITDI 212 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCC-TTCCEEEECCSHHHHHHHHHHH-H----TTC------CSEEEEES
T ss_pred CHHHHHhhhHHHHHHHHHHHcCCC-CCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECC
Confidence 333444443455556667655543 4678999999877766554443 2 464 56888876
No 383
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=52.10 E-value=31 Score=32.19 Aligned_cols=74 Identities=22% Similarity=0.293 Sum_probs=38.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhh-----cc-ccCCCCCHH
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-----AH-EHEPVKELV 457 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f-----A~-~~~~~~~L~ 457 (644)
..++||.||+. ||...++..+.+ .| -+++++|++. +.++.....+ .. +..+..++.
T Consensus 5 ~k~vlVtGasg---giG~~~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~D~~~~~~~~ 66 (234)
T 2ehd_A 5 KGAVLITGASR---GIGEATARLLHA-KG-------YRVGLMARDE-------KRLQALAAELEGALPLPGDVREEGDWA 66 (234)
T ss_dssp CCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHSTTCEEEECCTTCHHHHH
T ss_pred CCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEECCH-------HHHHHHHHHhhhceEEEecCCCHHHHH
Confidence 46789998743 444455555544 35 3588888741 1122211111 00 111223455
Q ss_pred HHHhcc-----CCcEEEEccCCC
Q 006454 458 DAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 458 eaV~~v-----kPtvLIG~S~~~ 475 (644)
++++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~~~~id~li~~Ag~~ 89 (234)
T 2ehd_A 67 RAVAAMEEAFGELSALVNNAGVG 89 (234)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCcC
Confidence 555544 799999887754
No 384
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=51.97 E-value=8.1 Score=40.03 Aligned_cols=89 Identities=16% Similarity=0.182 Sum_probs=50.6
Q ss_pred ceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhcc
Q 006454 385 QRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 463 (644)
Q Consensus 385 ~riv~~GAG-sAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 463 (644)
.||.|+|+| .+|...+..|.. ..++ +-+.++|++ .+......+.| ..+...++.|+++.-
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~----~~~~------~l~av~d~~-------~~~~~~~a~~~--g~~~~~~~~ell~~~ 63 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRH----HPDA------QIVAACDPN-------EDVRERFGKEY--GIPVFATLAEMMQHV 63 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHH----CTTE------EEEEEECSC-------HHHHHHHHHHH--TCCEESSHHHHHHHS
T ss_pred eEEEEEeCCHHHHHHHHHHHHh----CCCe------EEEEEEeCC-------HHHHHHHHHHc--CCCeECCHHHHHcCC
Confidence 589999999 888777766643 1121 234466653 11122222233 122347899999988
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEE
Q 006454 464 KPTILIGTSGQGRTFTKEVVEAMASLNEKPII 495 (644)
Q Consensus 464 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPII 495 (644)
++|+++ +++.+ .+..+++....+. -++++
T Consensus 64 ~vD~V~-i~tp~-~~H~~~~~~al~a-Gk~Vl 92 (387)
T 3moi_A 64 QMDAVY-IASPH-QFHCEHVVQASEQ-GLHII 92 (387)
T ss_dssp CCSEEE-ECSCG-GGHHHHHHHHHHT-TCEEE
T ss_pred CCCEEE-EcCCc-HHHHHHHHHHHHC-CCcee
Confidence 899988 55545 3444555443322 34554
No 385
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=51.77 E-value=23 Score=32.76 Aligned_cols=94 Identities=16% Similarity=0.262 Sum_probs=51.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCC-CCCHHHHHhc
Q 006454 386 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEP-VKELVDAVNA 462 (644)
Q Consensus 386 riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~-~~~L~eaV~~ 462 (644)
||+|.|| |-.|..+++.|++ .| -++++++++. ++...+ .+..+.+ +..+ ..++.++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~----~~~~~~--~~~~~~~~D~~d~~~~~~~~~~- 62 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKV----EQVPQY--NNVKAVHFDVDWTPEEMAKQLH- 62 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSG----GGSCCC--TTEEEEECCTTSCHHHHHTTTT-
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCc----cchhhc--CCceEEEecccCCHHHHHHHHc-
Confidence 7899994 6666666665543 25 4688888752 111111 1111111 2122 234666666
Q ss_pred cCCcEEEEccCCCCC--------CCHHHHHHHHcCCCCcEEEecC
Q 006454 463 IKPTILIGTSGQGRT--------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 463 vkPtvLIG~S~~~g~--------Fteevv~~Ma~~~erPIIFaLS 499 (644)
++|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 63 -~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 63 -GMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp -TCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred -CCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 49999988775531 1456777776655555666433
No 386
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=51.63 E-value=31 Score=33.75 Aligned_cols=104 Identities=14% Similarity=0.137 Sum_probs=57.0
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch----hhhhhcc-ccCCCCC
Q 006454 382 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH----FKKPWAH-EHEPVKE 455 (644)
Q Consensus 382 L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~----~k~~fA~-~~~~~~~ 455 (644)
-...||+|.|| |-.|..+++.|++ .| .+++.+|+..- ......+.. ....+.. +..+..+
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 77 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLE-----KG-------YRVHGLVARRS--SDTRWRLRELGIEGDIQYEDGDMADACS 77 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCS--SCCCHHHHHTTCGGGEEEEECCTTCHHH
T ss_pred ccCCeEEEECCCChHHHHHHHHHHH-----CC-------CeEEEEeCCCc--cccccchhhccccCceEEEECCCCCHHH
Confidence 34578999987 7677777766654 25 36888887421 000000110 0111111 1122246
Q ss_pred HHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCC-CCcEEEecC
Q 006454 456 LVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLN-EKPIIFSLS 499 (644)
Q Consensus 456 L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~-erPIIFaLS 499 (644)
+.++++.+++|++|=+.+.... -|..+++++.+.. .+.+||.=|
T Consensus 78 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 78 VQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 7888888899999988775431 1335677776655 367887544
No 387
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=51.61 E-value=11 Score=39.94 Aligned_cols=34 Identities=29% Similarity=0.434 Sum_probs=28.1
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 43 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAK 43 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCC
Confidence 35689999999999999988865 25 469999986
No 388
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=51.59 E-value=11 Score=39.10 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=28.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
..+|||+|||.||+..|..|.+.-... + +-++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~-~------~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQ-G------ALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHH-C------CCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhccccc-C------cccEEEEecCCC
Confidence 347999999999999999987642110 0 046889988753
No 389
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=51.57 E-value=47 Score=32.10 Aligned_cols=38 Identities=37% Similarity=0.501 Sum_probs=25.0
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.++++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 27 ~~l~~k~vlITGasg---gIG~~la~~L~~-~G-------~~V~~~~r~ 64 (272)
T 1yb1_A 27 KSVTGEIVLITGAGH---GIGRLTAYEFAK-LK-------SKLVLWDIN 64 (272)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEEcC
Confidence 457889999999753 444455555544 35 358888874
No 390
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=51.56 E-value=22 Score=33.42 Aligned_cols=37 Identities=24% Similarity=0.408 Sum_probs=23.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
++++.++||.||+. ||...++..+.+ .| -+++++|+.
T Consensus 8 ~~~~~~vlVtGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 44 (255)
T 1fmc_A 8 RLDGKCAIITGAGA---GIGKEIAITFAT-AG-------ASVVVSDIN 44 (255)
T ss_dssp CCTTCEEEETTTTS---HHHHHHHHHHHT-TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCcc---HHHHHHHHHHHH-CC-------CEEEEEcCC
Confidence 57788999999732 344444454444 35 358888874
No 391
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=51.55 E-value=34 Score=34.29 Aligned_cols=101 Identities=16% Similarity=0.195 Sum_probs=56.6
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh----------hhhhcc-ccCC
Q 006454 385 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF----------KKPWAH-EHEP 452 (644)
Q Consensus 385 ~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~----------k~~fA~-~~~~ 452 (644)
.+|+|.|| |-.|..+++.|++ .| .+++++|+..--. ..+.+... ...+.. +..+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d 90 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLE-----KG-------YEVHGIVRRSSSF--NTGRIEHLYKNPQAHIEGNMKLHYGDLTD 90 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCSSC--CCTTTGGGC---------CEEEEECCTTC
T ss_pred cEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEECCcccc--chhhHHHHhhhhccccCCCceEEEccCCC
Confidence 57999996 7777777777654 25 3688888752100 00112211 011111 1122
Q ss_pred CCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCC---CcEEEecC
Q 006454 453 VKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNE---KPIIFSLS 499 (644)
Q Consensus 453 ~~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~e---rPIIFaLS 499 (644)
..++.++++.+++|++|=+.+.... -|..+++++.+..- +.|||.=|
T Consensus 91 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS 156 (375)
T 1t2a_A 91 STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 156 (375)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecc
Confidence 2457788888899999988775421 12346666665543 56777543
No 392
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=51.51 E-value=27 Score=34.68 Aligned_cols=102 Identities=15% Similarity=0.147 Sum_probs=58.9
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh-----hhhhcc-ccCCCC
Q 006454 382 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-----KKPWAH-EHEPVK 454 (644)
Q Consensus 382 L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~-----k~~fA~-~~~~~~ 454 (644)
++..+|+|.|| |-.|..+++.|++ .| .+++++|+.. .+...+... +..+.. +..+..
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQT-----MG-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHh-----CC-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 34578999996 7777777777754 25 3688888742 111111100 111111 112224
Q ss_pred CHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCC-CCcEEEecC
Q 006454 455 ELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLN-EKPIIFSLS 499 (644)
Q Consensus 455 ~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~-erPIIFaLS 499 (644)
++.++++.+++|++|=+.+.... -|..+++++.+.. -+.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 57788888889999988875421 0234666665544 467888655
No 393
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=51.48 E-value=12 Score=39.60 Aligned_cols=35 Identities=23% Similarity=0.315 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 4689999999999999887764 363 6899998654
No 394
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=51.47 E-value=13 Score=38.67 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
++|||+|||.||+..|..|.+. . .| .++.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~--~-~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL--M-PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH--C-TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC--C-CC-------CeEEEECCCC
Confidence 5899999999999999988762 0 12 4688888764
No 395
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=51.45 E-value=12 Score=39.88 Aligned_cols=34 Identities=21% Similarity=0.476 Sum_probs=27.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+-.|+|+|||.+|+++|-.+.+ .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999998875 364 588999864
No 396
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=51.39 E-value=15 Score=39.26 Aligned_cols=32 Identities=25% Similarity=0.293 Sum_probs=26.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 426 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvD 426 (644)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999988761 15 4699999
No 397
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=51.39 E-value=40 Score=33.72 Aligned_cols=55 Identities=16% Similarity=0.245 Sum_probs=31.7
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 361 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 361 QGTaaVvLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
++...-.++..+.+.+..+. ..++++++.|||..|...+.++ .+ .|. +.+..+|+
T Consensus 139 ~aa~l~~~~~~~~~~~~~~~-~~g~~VlV~GaG~vG~~aiq~a-k~----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLAQG-CENKNVIIIGAGTIGLLAIQCA-VA----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGHHHHHHHHHHHHHTTC-CTTSEEEEECCSHHHHHHHHHH-HH----TTC------SEEEEEES
T ss_pred HHHhchHHHHHHHHHHHhcc-CCCCEEEEECCCCcchHHHHHH-HH----cCC------cEEEEEec
Confidence 44333334444444444443 4578999999998875544333 32 364 56777776
No 398
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=51.29 E-value=40 Score=32.38 Aligned_cols=76 Identities=18% Similarity=0.297 Sum_probs=40.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc----------cc
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------EH 450 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----------~~ 450 (644)
.+++.++||.||++ ||...|+..+.+ .|. +++++|++. +.+......+.. +.
T Consensus 26 ~l~~k~vlITGas~---gIG~~la~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D~ 87 (262)
T 3rkr_A 26 SLSGQVAVVTGASR---GIGAAIARKLGS-LGA-------RVVLTARDV-------EKLRAVEREIVAAGGEAESHACDL 87 (262)
T ss_dssp TTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEEEESCH-------HHHHHHHHHHHHTTCEEEEEECCT
T ss_pred ccCCCEEEEECCCC---hHHHHHHHHHHH-CCC-------EEEEEECCH-------HHHHHHHHHHHHhCCceeEEEecC
Confidence 36778999999743 333444444443 363 588888741 112222222211 11
Q ss_pred CCCCCHHHHHhcc-----CCcEEEEccCC
Q 006454 451 EPVKELVDAVNAI-----KPTILIGTSGQ 474 (644)
Q Consensus 451 ~~~~~L~eaV~~v-----kPtvLIG~S~~ 474 (644)
....++.++++.+ ++|+||=..+.
T Consensus 88 ~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 88 SHSDAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp TCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 1223455555554 79999987775
No 399
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=51.20 E-value=12 Score=41.10 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=28.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 35689999999999999998865 353 689999864
No 400
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=51.19 E-value=41 Score=32.31 Aligned_cols=77 Identities=18% Similarity=0.234 Sum_probs=43.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc----------cc
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------EH 450 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----------~~ 450 (644)
+++++++||.||++ ||...++..+.+ .|. +++++|++. +.++..+..+.. |.
T Consensus 4 ~~~~k~vlVTGas~---GIG~aia~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~Dv 65 (252)
T 3h7a_A 4 TPRNATVAVIGAGD---YIGAEIAKKFAA-EGF-------TVFAGRRNG-------EKLAPLVAEIEAAGGRIVARSLDA 65 (252)
T ss_dssp -CCSCEEEEECCSS---HHHHHHHHHHHH-TTC-------EEEEEESSG-------GGGHHHHHHHHHTTCEEEEEECCT
T ss_pred CCCCCEEEEECCCc---hHHHHHHHHHHH-CCC-------EEEEEeCCH-------HHHHHHHHHHHhcCCeEEEEECcC
Confidence 56788999999864 455555555554 363 588888741 223333222211 11
Q ss_pred CCCCCHHHHHhcc----CCcEEEEccCCC
Q 006454 451 EPVKELVDAVNAI----KPTILIGTSGQG 475 (644)
Q Consensus 451 ~~~~~L~eaV~~v----kPtvLIG~S~~~ 475 (644)
.+..++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~v~~~~~~~~~~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 66 RNEDEVTAFLNAADAHAPLEVTIFNVGAN 94 (252)
T ss_dssp TCHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred CCHHHHHHHHHHHHhhCCceEEEECCCcC
Confidence 1223455555554 789999776654
No 401
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=51.16 E-value=14 Score=37.79 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=26.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
+|+|+|||.+|+..|-.|.+ .| .++.++|+..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLAR-----NG-------HEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCCC
Confidence 79999999999999988865 25 36888887643
No 402
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=51.02 E-value=14 Score=37.53 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=26.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+|+|+|||.+|+..|-.|.+. | .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCCC
Confidence 699999999999999888752 5 4688888763
No 403
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=50.82 E-value=12 Score=40.20 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=28.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
.+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 356899999999999999888652 5 3689999864
No 404
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=50.81 E-value=19 Score=38.87 Aligned_cols=107 Identities=23% Similarity=0.267 Sum_probs=58.5
Q ss_pred CceEEEeCcChHHH-HHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhc
Q 006454 384 DQRFLFLGAGEAGT-GIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 462 (644)
Q Consensus 384 d~riv~~GAGsAG~-GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 462 (644)
-+||.|+|.|-+|+ |+|++|.+ .| -++...|.+ .....+.|...-.++-- ... .+-+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~-----~G-------~~V~~~D~~---~~~~~~~l~~~gi~~~~-g~~----~~~~~- 80 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLAN-----EG-------YQISGSDLA---PNSVTQHLTALGAQIYF-HHR----PENVL- 80 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHH-----TT-------CEEEEECSS---CCHHHHHHHHTTCEEES-SCC----GGGGT-
T ss_pred CCEEEEEEEcHhhHHHHHHHHHh-----CC-------CeEEEEECC---CCHHHHHHHHCCCEEEC-CCC----HHHcC-
Confidence 37999999999999 58988865 36 368888864 11000111111111110 011 11233
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCC-cEEEeeCC
Q 006454 463 IKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQG-RAIFASGS 526 (644)
Q Consensus 463 vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPts~aEct~edA~~wT~G-raifASGS 526 (644)
.+|.+|=.++.+ .=++++.++.. ..-|||= . +|-++.+.++ +.|-.|||
T Consensus 81 -~~d~vV~Spgi~-~~~p~~~~a~~--~gi~v~~-------~----~e~l~~~~~~~~~IaVTGT 130 (494)
T 4hv4_A 81 -DASVVVVSTAIS-ADNPEIVAARE--ARIPVIR-------R----AEMLAELMRYRHGIAVAGT 130 (494)
T ss_dssp -TCSEEEECTTSC-TTCHHHHHHHH--TTCCEEE-------H----HHHHHHHHTTSEEEEEECS
T ss_pred -CCCEEEECCCCC-CCCHHHHHHHH--CCCCEEc-------H----HHHHHHHhcCCCEEEEecC
Confidence 388888555655 35777777665 2446652 2 2333444444 46777887
No 405
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=50.62 E-value=13 Score=39.06 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+.+|||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LG-------MKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 3579999999999999977764 25 3689999873
No 406
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=50.48 E-value=17 Score=35.05 Aligned_cols=78 Identities=13% Similarity=0.153 Sum_probs=42.4
Q ss_pred CCCceEEEeCcC---hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhh-----hc-cccCC
Q 006454 382 LADQRFLFLGAG---EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP-----WA-HEHEP 452 (644)
Q Consensus 382 L~d~riv~~GAG---sAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~-----fA-~~~~~ 452 (644)
|+++++||.||+ -.|..+|+.+++ .| -+++++|++. ...+.+...... +. -+..+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~-----~G-------~~V~~~~r~~----~~~~~~~~l~~~~~~~~~~~~D~~~ 70 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHR-----EG-------AELAFTYQND----KLKGRVEEFAAQLGSDIVLQCDVAE 70 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESST----TTHHHHHHHHHHTTCCCEEECCTTC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHH-----CC-------CEEEEEcCcH----HHHHHHHHHHHhcCCcEEEEccCCC
Confidence 677899999984 455556665543 36 3588888753 111111111111 10 01112
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 453 VKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 453 ~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
..++.++++.+ ++|+||=..+..
T Consensus 71 ~~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 71 DASIDTMFAELGKVWPKFDGFVHSIGFA 98 (265)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455555544 789999887764
No 407
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=50.38 E-value=11 Score=38.66 Aligned_cols=96 Identities=14% Similarity=0.130 Sum_probs=52.7
Q ss_pred CCCceEEEeC-cChHHHH-HH----HHHHHHHHHhcCCChhhhcCe----EEEEccCCcccCCCccCCchhhhhhcccc-
Q 006454 382 LADQRFLFLG-AGEAGTG-IA----ELIALEISKQTNMPLEETRKK----IWLVDSKGLIVSSRLESLQHFKKPWAHEH- 450 (644)
Q Consensus 382 L~d~riv~~G-AGsAG~G-IA----~ll~~~m~~~~Gls~eeAr~~----i~lvDs~GLi~~~R~~~L~~~k~~fA~~~- 450 (644)
.+..||.++| +|..|.+ .+ +.+.. ..++.... ... +.++|++ . +..+.+|...
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~----~~~~~l~~-~~~~~~~~av~~~~-------~----~~a~~~a~~~~ 67 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRD----QGGVRLKN-GDRIMPDPILVGRS-------A----EKVEALAKRFN 67 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHH----HTSEECTT-SCEEEEEEEEECSS-------S----HHHHHHHHHTT
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhh----cCceeecC-CcccceeeEEEcCC-------H----HHHHHHHHHhC
Confidence 3456899999 9999987 66 44432 22221100 011 1245542 1 1122344321
Q ss_pred -CC-CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 006454 451 -EP-VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 496 (644)
Q Consensus 451 -~~-~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 496 (644)
+. ..++.|+++.-++|+++ +.+.. .+..+++++..+. .++|+.
T Consensus 68 ~~~~~~~~~~ll~~~~iD~V~-i~tp~-~~h~~~~~~al~~-Gk~V~~ 112 (383)
T 3oqb_A 68 IARWTTDLDAALADKNDTMFF-DAATT-QARPGLLTQAINA-GKHVYC 112 (383)
T ss_dssp CCCEESCHHHHHHCSSCCEEE-ECSCS-SSSHHHHHHHHTT-TCEEEE
T ss_pred CCcccCCHHHHhcCCCCCEEE-ECCCc-hHHHHHHHHHHHC-CCeEEE
Confidence 11 37899999988899887 55544 4666665554432 356554
No 408
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=50.38 E-value=15 Score=38.37 Aligned_cols=37 Identities=22% Similarity=0.337 Sum_probs=29.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
..+|||+|||.||+..|..+.+ .|. ..+|.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCc-----CCCEEEEECCCC
Confidence 4689999999999999998865 364 237999998643
No 409
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=50.30 E-value=17 Score=39.03 Aligned_cols=37 Identities=14% Similarity=0.238 Sum_probs=28.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 431 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi 431 (644)
.+|||+|||.||+..|..|.+. |- ..+|.++|+..-+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCCc
Confidence 4899999999999999988653 21 2479999987543
No 410
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=50.20 E-value=13 Score=36.17 Aligned_cols=32 Identities=25% Similarity=0.319 Sum_probs=24.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
--|+|+|||.||+-.|..+.+ .| .++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g-------~~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----AN-------LKTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 357999999999998877654 35 368889864
No 411
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=50.13 E-value=40 Score=33.86 Aligned_cols=79 Identities=20% Similarity=0.338 Sum_probs=51.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccC
Q 006454 386 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 464 (644)
Q Consensus 386 riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 464 (644)
||+|.|| |-.|..+++.|++. |. -+++.+|+. .+..+|.++++.
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 7999994 88888888877653 42 257777664 111346677775
Q ss_pred CcEEEEccCCCCC------------CCHHHHHHHHcCCCC-cEEEecC
Q 006454 465 PTILIGTSGQGRT------------FTKEVVEAMASLNEK-PIIFSLS 499 (644)
Q Consensus 465 PtvLIG~S~~~g~------------Fteevv~~Ma~~~er-PIIFaLS 499 (644)
+|++|=+.+.... .+..+++++.+..-+ .+||.=|
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 8999976654321 246788888766555 6777543
No 412
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=50.08 E-value=38 Score=31.64 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=24.5
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.++++.+++|.||.. ||...++..+.+ .| -+++++|++
T Consensus 3 ~~~~~~~vlVtGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 40 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTR---GIGRAIAEKLAS-AG-------STVIITGTS 40 (248)
T ss_dssp CCCTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEESS
T ss_pred cccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357788999998743 444455555544 35 358888874
No 413
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=50.04 E-value=34 Score=32.79 Aligned_cols=79 Identities=18% Similarity=0.272 Sum_probs=41.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc-hhhhhhcc-ccCCCCCHHH
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ-HFKKPWAH-EHEPVKELVD 458 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~-~~k~~fA~-~~~~~~~L~e 458 (644)
+|+++++||.||+. ||...++..+.+ .| -+++++|++- ++ +.+. .....+.+ +..+..++.+
T Consensus 3 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~-~~~~~~~~~~~~~~D~~~~~~~~~ 66 (256)
T 2d1y_A 3 LFAGKGVLVTGGAR---GIGRAIAQAFAR-EG-------ALVALCDLRP----EG-KEVAEAIGGAFFQVDLEDERERVR 66 (256)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESST----TH-HHHHHHHTCEEEECCTTCHHHHHH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----hH-HHHHHHhhCCEEEeeCCCHHHHHH
Confidence 46778999999753 444445555544 36 3588888741 11 1010 00001111 2122234555
Q ss_pred HHhcc-----CCcEEEEccCCC
Q 006454 459 AVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 459 aV~~v-----kPtvLIG~S~~~ 475 (644)
+++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~g~iD~lv~~Ag~~ 88 (256)
T 2d1y_A 67 FVEEAAYALGRVDVLVNNAAIA 88 (256)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 66554 799999877654
No 414
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=49.96 E-value=16 Score=40.83 Aligned_cols=34 Identities=26% Similarity=0.465 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
..+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G-------~~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----G-------YDVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999988753 5 3699999863
No 415
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=49.95 E-value=30 Score=35.40 Aligned_cols=44 Identities=18% Similarity=0.167 Sum_probs=28.1
Q ss_pred HHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 373 SAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 373 ~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
.|+.....--.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 183 ~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 183 GAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp HHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred HHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 334333334457899999999877666554432 264 57888885
No 416
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=49.83 E-value=16 Score=39.16 Aligned_cols=38 Identities=21% Similarity=0.341 Sum_probs=29.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
...+|||+|||.||+..|..|.+. +. ..+|.|+|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 356899999999999999988653 21 257999998743
No 417
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=49.77 E-value=29 Score=35.08 Aligned_cols=56 Identities=13% Similarity=0.144 Sum_probs=35.0
Q ss_pred chHHHHHHHHHHHHHHhCCCCCC--ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 362 GTASVVLAGLISAMKFLGGSLAD--QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 362 GTaaVvLAgll~Alr~~g~~L~d--~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
++-...++..+.|+...+.--.+ ++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 33334455556666333333356 89999998 8888777666543 363 478888873
No 418
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=49.61 E-value=28 Score=33.67 Aligned_cols=78 Identities=17% Similarity=0.172 Sum_probs=42.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhh---c----cccCC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW---A----HEHEP 452 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f---A----~~~~~ 452 (644)
.+|+++++||.||+. ||...++..+.+ .| -+++++|++. +.++...... + -+..+
T Consensus 3 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~ 64 (260)
T 1nff_A 3 GRLTGKVALVSGGAR---GMGASHVRAMVA-EG-------AKVVFGDILD-------EEGKAMAAELADAARYVHLDVTQ 64 (260)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHTGGGEEEEECCTTC
T ss_pred CCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHhhcCceEEEecCCC
Confidence 357788999999754 444445555544 36 3588887741 1121111111 1 12122
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 453 VKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 453 ~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
..++.++++.+ ++|+||=..+..
T Consensus 65 ~~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 92 (260)
T 1nff_A 65 PAQWKAAVDTAVTAFGGLHVLVNNAGIL 92 (260)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455666644 799999777654
No 419
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=49.57 E-value=23 Score=36.01 Aligned_cols=49 Identities=20% Similarity=0.160 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 367 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 367 vLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
.++..+.|++..+.+ ..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGVT-LGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 344445566554433 46799999999777666554432 364 57888876
No 420
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=49.56 E-value=12 Score=39.23 Aligned_cols=33 Identities=27% Similarity=0.239 Sum_probs=26.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G-------~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LG-------LSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCC
Confidence 4579999999999999987754 25 368999986
No 421
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=49.54 E-value=29 Score=32.92 Aligned_cols=77 Identities=12% Similarity=0.158 Sum_probs=42.7
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc----------c
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------E 449 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----------~ 449 (644)
.+++++++||.||+. ||...|+..+.+ .|. +++++|++ .+.+......+.. +
T Consensus 5 ~~~~~k~vlITGas~---giG~~~a~~l~~-~G~-------~V~~~~r~-------~~~~~~~~~~~~~~~~~~~~~~~D 66 (253)
T 3qiv_A 5 MRFENKVGIVTGSGG---GIGQAYAEALAR-EGA-------AVVVADIN-------AEAAEAVAKQIVADGGTAISVAVD 66 (253)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESC-------HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEECCCC---hHHHHHHHHHHH-CCC-------EEEEEcCC-------HHHHHHHHHHHHhcCCcEEEEEcc
Confidence 467889999999743 344444444444 363 58888873 1112222222111 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCC
Q 006454 450 HEPVKELVDAVNAI-----KPTILIGTSGQ 474 (644)
Q Consensus 450 ~~~~~~L~eaV~~v-----kPtvLIG~S~~ 474 (644)
..+..++.++++.+ ++|+||=..+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 67 VSDPESAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp TTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 11223455556554 89999988775
No 422
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=49.53 E-value=14 Score=38.79 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
-+++|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LG-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 479999999999999987764 25 3689999863
No 423
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=49.50 E-value=67 Score=30.55 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=41.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHH
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 460 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 460 (644)
+|+++++||.||+. ||...++..+.+ .| -+++++|++--+ .... -..+.-+..+..++.+++
T Consensus 4 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~~~~-----~~~~--~~~~~~D~~d~~~~~~~~ 65 (250)
T 2fwm_X 4 DFSGKNVWVTGAGK---GIGYATALAFVE-AG-------AKVTGFDQAFTQ-----EQYP--FATEVMDVADAAQVAQVC 65 (250)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESCCCS-----SCCS--SEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCchhh-----hcCC--ceEEEcCCCCHHHHHHHH
Confidence 47788999999743 344445555544 36 358888875211 0010 001111222223455566
Q ss_pred hcc-----CCcEEEEccCCC
Q 006454 461 NAI-----KPTILIGTSGQG 475 (644)
Q Consensus 461 ~~v-----kPtvLIG~S~~~ 475 (644)
+.+ ++|+||=..+..
T Consensus 66 ~~~~~~~g~id~lv~~Ag~~ 85 (250)
T 2fwm_X 66 QRLLAETERLDALVNAAGIL 85 (250)
T ss_dssp HHHHHHCSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCcC
Confidence 544 799999777653
No 424
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=49.42 E-value=20 Score=35.53 Aligned_cols=80 Identities=15% Similarity=0.197 Sum_probs=43.3
Q ss_pred CCCCCceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc------cc
Q 006454 380 GSLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH------EH 450 (644)
Q Consensus 380 ~~L~d~riv~~GAGs---AG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~------~~ 450 (644)
..|+++++||.||++ .|..+|+.+++ .|. +++++|++- ...+.+......+.+ |.
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~-----~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dv 90 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAARE-----AGA-------ELAFTYQGD----ALKKRVEPLAEELGAFVAGHCDV 90 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHH-----TTC-------EEEEEECSH----HHHHHHHHHHHHHTCEEEEECCT
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHH-----CCC-------EEEEEcCCH----HHHHHHHHHHHhcCCceEEECCC
Confidence 458889999999864 45556665543 363 588888751 000111111111111 11
Q ss_pred CCCCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 451 EPVKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 451 ~~~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
.+..++.++++.+ +.|+||=..+..
T Consensus 91 ~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 91 ADAASIDAVFETLEKKWGKLDFLVHAIGFS 120 (293)
T ss_dssp TCHHHHHHHHHHHHHHTSCCSEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 2223455555544 799999777754
No 425
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=49.41 E-value=13 Score=36.01 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=24.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+|+|+|||.||+..|..+.+ .|. ++.+++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999988764 253 57777653
No 426
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=49.26 E-value=37 Score=32.67 Aligned_cols=38 Identities=26% Similarity=0.471 Sum_probs=24.5
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+++++++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 9 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 46 (267)
T 1iy8_A 9 TRFTDRVVLITGGGS---GLGRATAVRLAA-EG-------AKLSLVDVS 46 (267)
T ss_dssp -CCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 457888999999753 444555555544 36 358888874
No 427
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=49.20 E-value=15 Score=39.87 Aligned_cols=38 Identities=21% Similarity=0.346 Sum_probs=29.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
..+|||+|||.||.-.|-.|.+... .| -+|.|+|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999998876420 24 46999998643
No 428
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=49.10 E-value=16 Score=38.77 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=29.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
..+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 47899999999999999998764 20 125799999864
No 429
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=49.04 E-value=12 Score=39.65 Aligned_cols=63 Identities=14% Similarity=0.192 Sum_probs=28.8
Q ss_pred CCcchHHHHHHHHHHHHHH---hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 006454 359 DIQGTASVVLAGLISAMKF---LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 431 (644)
Q Consensus 359 DiQGTaaVvLAgll~Alr~---~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi 431 (644)
..||-|+++.---++--.. ...+....+|||+|||.||+..|..+.+.. .| .++.++|+....
T Consensus 8 ~~~~~~~~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 8 HHHGMASMTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp -----------------------------CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred cccccccccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 3456666655444432211 111122358999999999999999886531 12 479999987543
No 430
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=49.01 E-value=14 Score=39.63 Aligned_cols=37 Identities=22% Similarity=0.347 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
..+|||+|||.||+..|-.|.+... .| -++.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQ-------ANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SS-------CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEECCCC
Confidence 4689999999999999988875310 24 3689999854
No 431
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=48.99 E-value=14 Score=38.93 Aligned_cols=34 Identities=21% Similarity=0.170 Sum_probs=27.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+.++||+|||.||+..|..+.+. | .++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-----G-------FKTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEeCCC
Confidence 35799999999999999888642 5 3699999874
No 432
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=48.95 E-value=23 Score=35.75 Aligned_cols=93 Identities=13% Similarity=0.108 Sum_probs=51.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 464 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 464 (644)
.||.|+|+|..|...++.+.. +..+. +-+.++|++ .+......+.|--......++.|+++.-+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~---~~~~~------~l~av~d~~-------~~~~~~~~~~~g~~~~~~~~~~~ll~~~~ 66 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITN---KLSGA------EIVAVTDVN-------QEAAQKVVEQYQLNATVYPNDDSLLADEN 66 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---TCSSE------EEEEEECSS-------HHHHHHHHHHTTCCCEEESSHHHHHHCTT
T ss_pred EEEEEECccHHHHHHHHHHHh---hCCCc------EEEEEEcCC-------HHHHHHHHHHhCCCCeeeCCHHHHhcCCC
Confidence 489999999988766655542 11121 223466652 11122222222100112478999999878
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 006454 465 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 496 (644)
Q Consensus 465 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 496 (644)
+|+++ +++.. ....+++....+.. ++|+.
T Consensus 67 ~D~V~-i~tp~-~~h~~~~~~al~~G-k~vl~ 95 (344)
T 3mz0_A 67 VDAVL-VTSWG-PAHESSVLKAIKAQ-KYVFC 95 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CEEEE
T ss_pred CCEEE-ECCCc-hhHHHHHHHHHHCC-CcEEE
Confidence 99888 44444 45566666554433 55554
No 433
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=48.92 E-value=20 Score=35.31 Aligned_cols=79 Identities=16% Similarity=0.249 Sum_probs=40.0
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc-----------
Q 006454 379 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA----------- 447 (644)
Q Consensus 379 g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA----------- 447 (644)
..+++++++||.||++ ||...|+..+.+ .| -+++++|++- +.++.......
T Consensus 28 ~~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~ 89 (281)
T 4dry_A 28 KGSGEGRIALVTGGGT---GVGRGIAQALSA-EG-------YSVVITGRRP-------DVLDAAAGEIGGRTGNIVRAVV 89 (281)
T ss_dssp ------CEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHHHHHSSCEEEEE
T ss_pred CCCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEECCH-------HHHHHHHHHHHhcCCCeEEEEE
Confidence 3567889999999753 344444454444 36 3588888741 11222211111
Q ss_pred cccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 448 HEHEPVKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 448 ~~~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
-|..+..++.++++.+ ++|+||=..+..
T Consensus 90 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~ 122 (281)
T 4dry_A 90 CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSN 122 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 1112223455666655 799999877754
No 434
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=48.88 E-value=15 Score=37.18 Aligned_cols=101 Identities=18% Similarity=0.186 Sum_probs=60.3
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhh-------cc-cc
Q 006454 380 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-------AH-EH 450 (644)
Q Consensus 380 ~~L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f-------A~-~~ 450 (644)
..+++.+|+|.|| |..|..+++.|++. .|. .+++++|++- ..+...+..+ .. +-
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~----~g~------~~V~~~~r~~-------~~~~~~~~~~~~~~v~~~~~Dl 79 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDT----TNA------KKIIVYSRDE-------LKQSEMAMEFNDPRMRFFIGDV 79 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHH----CCC------SEEEEEESCH-------HHHHHHHHHHCCTTEEEEECCT
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhh----CCC------CEEEEEECCh-------hhHHHHHHHhcCCCEEEEECCC
Confidence 4577889999996 88888888877642 142 4788888741 1111111111 11 11
Q ss_pred CCCCCHHHHHhccCCcEEEEccCCCCC----C------------CHHHHHHHHcCCCCcEEEecC
Q 006454 451 EPVKELVDAVNAIKPTILIGTSGQGRT----F------------TKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 451 ~~~~~L~eaV~~vkPtvLIG~S~~~g~----F------------teevv~~Ma~~~erPIIFaLS 499 (644)
.+..++.++++ ++|++|=+.+.... . |..+++++.+..-+-|||.=|
T Consensus 80 ~d~~~l~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 80 RDLERLNYALE--GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp TCHHHHHHHTT--TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCHHHHHHHHh--cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 22235667776 59999998876531 0 235677776666567887554
No 435
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=48.88 E-value=13 Score=37.85 Aligned_cols=35 Identities=14% Similarity=0.286 Sum_probs=26.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+.++||+|||.||+..|..+.+ .|. .-++.++|+.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 3689999999999999988754 353 2357888764
No 436
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=48.83 E-value=17 Score=37.98 Aligned_cols=23 Identities=30% Similarity=0.466 Sum_probs=19.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHH
Q 006454 384 DQRFLFLGAGEAGTGIAELIALE 406 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~ 406 (644)
+--|||+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 35699999999999999988653
No 437
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=48.81 E-value=35 Score=34.87 Aligned_cols=49 Identities=14% Similarity=0.219 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 367 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 367 vLAgll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
+....+.|++..+.....++++|.|||..|..++.++.. .|. +++.+|+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~ 219 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVIST 219 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 333445667666655478999999999877766655532 352 5787775
No 438
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=48.59 E-value=16 Score=35.57 Aligned_cols=98 Identities=14% Similarity=0.225 Sum_probs=55.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccc---------cCCCCC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE---------HEPVKE 455 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~---------~~~~~~ 455 (644)
.||.|+|+|..|..+|..+... | .+++++|++.= .++..++.-... .-...+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~ 64 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPA-------HIEAIRKNGLIADFNGEEVVANLPIFS 64 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH-------HHHHHHHHCEEEEETTEEEEECCCEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHH-------HHHHHHhCCEEEEeCCCeeEecceeec
Confidence 4899999999999999888642 5 36888887421 111111110000 000012
Q ss_pred HHHHHhcc-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCCC
Q 006454 456 LVDAVNAI-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPTS 503 (644)
Q Consensus 456 L~eaV~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPts 503 (644)
..|+.+.+ +.|++|= +... -..+++++.++.+ .+..+|..++|...
T Consensus 65 ~~~~~~~~~~~d~vi~-~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 65 PEEIDHQNEQVDLIIA-LTKA-QQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp GGGCCTTSCCCSEEEE-CSCH-HHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred chhhcccCCCCCEEEE-Eecc-ccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 22222211 4787763 3323 2468888888764 34678888998663
No 439
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.58 E-value=13 Score=38.89 Aligned_cols=32 Identities=28% Similarity=0.305 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LG-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 479999999999999987764 25 369999986
No 440
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=48.57 E-value=12 Score=39.48 Aligned_cols=33 Identities=21% Similarity=0.413 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4689999999999999988864 25 469999986
No 441
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=48.54 E-value=47 Score=32.07 Aligned_cols=39 Identities=23% Similarity=0.298 Sum_probs=25.4
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 379 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 379 g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
..+|+++++||.||++ ||...|+..+.+ .| -+++++|+.
T Consensus 8 ~~~l~gk~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 46 (278)
T 3sx2_A 8 EGPLTGKVAFITGAAR---GQGRAHAVRLAA-DG-------ADIIAVDLC 46 (278)
T ss_dssp -CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEECC
T ss_pred CCCCCCCEEEEECCCC---hHHHHHHHHHHH-CC-------CeEEEEecc
Confidence 4578899999999753 344444444444 36 358889876
No 442
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=48.54 E-value=27 Score=35.13 Aligned_cols=45 Identities=16% Similarity=0.002 Sum_probs=31.0
Q ss_pred CCHHHHHhccC-CcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEec
Q 006454 454 KELVDAVNAIK-PTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSL 498 (644)
Q Consensus 454 ~~L~eaV~~vk-PtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaL 498 (644)
.++.++++..+ +|++|=+.+.... -|..++++|.+..-+.|||.=
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~S 143 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSS 143 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEEC
Confidence 35777787666 9999988876531 134577888776666788853
No 443
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=48.51 E-value=11 Score=39.86 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
.+|||+|||.||...|-.|.+... .| -++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G-------~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DR-------IDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GG-------SEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEEecCCC
Confidence 479999999999999998876431 24 36889988643
No 444
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=48.41 E-value=1.8e+02 Score=29.84 Aligned_cols=127 Identities=17% Similarity=0.176 Sum_probs=87.0
Q ss_pred HHHhcCCCccceecccCCCCcHHHHHHHHcCCCceee--cCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCc--ChHH
Q 006454 321 VKQNYGERILIQVFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGA--GEAG 396 (644)
Q Consensus 321 v~~~fGp~~lIq~fEDf~~~nAf~lL~ryr~~~~~FN--DDiQGTaaVvLAgll~Alr~~g~~L~d~riv~~GA--GsAG 396 (644)
+-.+||.++++ .-.+....+..+|.+|- ++||.| |-..--=.=+||=++.-.+..| +|++.||.++|- |+
T Consensus 85 vls~~~~D~iv--iR~~~~~~~~~~la~~~-~vPVINAG~g~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGDl~~~-- 158 (291)
T 3d6n_B 85 TFEGLGFDYVV--FRVPFVFFPYKEIVKSL-NLRLVNAGDGTHQHPSQGLIDFFTIKEHFG-EVKDLRVLYVGDIKHS-- 158 (291)
T ss_dssp HHHHTTCSEEE--EEESSCCCSCHHHHHTC-SSEEEEEEETTTBCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTC--
T ss_pred HHHHhcCCEEE--EEcCChHHHHHHHHHhC-CCCEEeCccCCCcCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCCC--
Confidence 45678756665 36676555554377774 699999 5455555667788877666665 799999999998 63
Q ss_pred HHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccCCcEEEEccCC
Q 006454 397 TGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQ 474 (644)
Q Consensus 397 ~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~ 474 (644)
-+|+-++.++.+ .|+ +|.++-.+|+.-.. +.... ..-..++.|+|+. .||+.-+--+
T Consensus 159 -rva~Sl~~~~~~-~g~-------~v~~~~P~~~~p~~----~~~~g------~~~~~d~~eav~~--aDvvy~~~~q 215 (291)
T 3d6n_B 159 -RVFRSGAPLLNM-FGA-------KIGVCGPKTLIPRD----VEVFK------VDVFDDVDKGIDW--ADVVIWLRLQ 215 (291)
T ss_dssp -HHHHHHHHHHHH-TTC-------EEEEESCGGGSCTT----GGGGC------EEEESSHHHHHHH--CSEEEECCCC
T ss_pred -chHHHHHHHHHH-CCC-------EEEEECCchhCCch----HHHCC------CEEEcCHHHHhCC--CCEEEEeCcc
Confidence 477777777766 474 69999999884322 22110 1113689999998 9999985443
No 445
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=48.41 E-value=48 Score=32.04 Aligned_cols=77 Identities=21% Similarity=0.274 Sum_probs=40.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHH
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 459 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 459 (644)
.+++.+++||.||+. ||...++..+.+ .| -+++++|++. +.++.. ..+.-+..+..++.++
T Consensus 17 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~-------~~~~~~-~~~~~Dl~d~~~v~~~ 77 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNR---GIGLAIARAFAD-AG-------DKVAITYRSG-------EPPEGF-LAVKCDITDTEQVEQA 77 (253)
T ss_dssp ---CCCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS-------CCCTTS-EEEECCTTSHHHHHHH
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh-------Hhhccc-eEEEecCCCHHHHHHH
Confidence 346678899999753 444455555554 36 3688888742 112220 0111121222345555
Q ss_pred Hhcc-----CCcEEEEccCCC
Q 006454 460 VNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 460 V~~v-----kPtvLIG~S~~~ 475 (644)
++.+ ++|+||=..+..
T Consensus 78 ~~~~~~~~g~iD~lv~nAg~~ 98 (253)
T 2nm0_A 78 YKEIEETHGPVEVLIANAGVT 98 (253)
T ss_dssp HHHHHHHTCSCSEEEEECSCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 5544 689999776653
No 446
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=48.27 E-value=33 Score=34.42 Aligned_cols=84 Identities=8% Similarity=0.080 Sum_probs=47.2
Q ss_pred CCceEEEeCcChHHH-HHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHh
Q 006454 383 ADQRFLFLGAGEAGT-GIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 461 (644)
Q Consensus 383 ~d~riv~~GAGsAG~-GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~ 461 (644)
+..||.|+|+|..|. .++..+ .. .|. +=+.++|++ .+ ....+.+.|- ...-..++.|+++
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l----~~-~~~------~lvav~d~~----~~---~~~~~a~~~~-~~~~~~~~~~ll~ 63 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQL----ID-AGA------ELAGVFESD----SD---NRAKFTSLFP-SVPFAASAEQLIT 63 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHH----HH-TTC------EEEEEECSC----TT---SCHHHHHHST-TCCBCSCHHHHHT
T ss_pred CccEEEEECCChHHHHHhhhhh----cC-CCc------EEEEEeCCC----HH---HHHHHHHhcC-CCcccCCHHHHhh
Confidence 346899999998774 343333 22 232 224578863 22 2334444441 1123478999998
Q ss_pred ccCCcEEEEccCCCCCCCHHHHH-HHH
Q 006454 462 AIKPTILIGTSGQGRTFTKEVVE-AMA 487 (644)
Q Consensus 462 ~vkPtvLIG~S~~~g~Fteevv~-~Ma 487 (644)
.-++|+++ +++.. .+..+++. ++.
T Consensus 64 ~~~~D~V~-i~tp~-~~h~~~~~~al~ 88 (336)
T 2p2s_A 64 DASIDLIA-CAVIP-CDRAELALRTLD 88 (336)
T ss_dssp CTTCCEEE-ECSCG-GGHHHHHHHHHH
T ss_pred CCCCCEEE-EeCCh-hhHHHHHHHHHH
Confidence 87899887 55544 34445444 454
No 447
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=48.22 E-value=5 Score=42.85 Aligned_cols=25 Identities=28% Similarity=0.438 Sum_probs=21.2
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHH
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALE 406 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~ 406 (644)
....+|+|+|||.||+..|..|.+.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc
Confidence 3457899999999999999998753
No 448
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=48.17 E-value=74 Score=31.06 Aligned_cols=77 Identities=17% Similarity=0.177 Sum_probs=42.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc----------ccc
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA----------HEH 450 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA----------~~~ 450 (644)
+|+++++||.||++ ||...++..+.+ .| -+++++|++ . +.+........ -+.
T Consensus 30 ~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~Dv 91 (275)
T 4imr_A 30 GLRGRTALVTGSSR---GIGAAIAEGLAG-AG-------AHVILHGVK----P---GSTAAVQQRIIASGGTAQELAGDL 91 (275)
T ss_dssp CCTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEESS----T---TTTHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEcCC----H---HHHHHHHHHHHhcCCeEEEEEecC
Confidence 57788999999753 344445555544 36 368888874 1 12333222221 122
Q ss_pred CCCCCHHHHHhcc----CCcEEEEccCCC
Q 006454 451 EPVKELVDAVNAI----KPTILIGTSGQG 475 (644)
Q Consensus 451 ~~~~~L~eaV~~v----kPtvLIG~S~~~ 475 (644)
.+..++.++++.+ +.|+||=..+..
T Consensus 92 ~~~~~~~~~~~~~~~~g~iD~lvnnAg~~ 120 (275)
T 4imr_A 92 SEAGAGTDLIERAEAIAPVDILVINASAQ 120 (275)
T ss_dssp TSTTHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 2223455555443 799999777643
No 449
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=48.14 E-value=42 Score=32.48 Aligned_cols=94 Identities=15% Similarity=0.186 Sum_probs=52.6
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHhcc
Q 006454 386 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 463 (644)
Q Consensus 386 riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~v 463 (644)
||+|.|| |-.|..+++.|++ .| .+++.+|+.. ......+ .....+.. +..+.. +.++++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~-~~~~~~~~~Dl~d~~-~~~~~~-- 62 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVE-----LG-------YEVVVVDNLS---SGRREFV-NPSAELHVRDLKDYS-WGAGIK-- 62 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS---SCCGGGS-CTTSEEECCCTTSTT-TTTTCC--
T ss_pred EEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC---CCchhhc-CCCceEEECccccHH-HHhhcC--
Confidence 7999998 8888888877764 25 3688887641 1111101 11111111 111112 444444
Q ss_pred CCcEEEEccCCCCCC----------------CHHHHHHHHcCCCCcEEEecC
Q 006454 464 KPTILIGTSGQGRTF----------------TKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 464 kPtvLIG~S~~~g~F----------------teevv~~Ma~~~erPIIFaLS 499 (644)
.|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 63 -~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 63 -GDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp -CSEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 39999887754211 245777777766678888654
No 450
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=48.02 E-value=1.1e+02 Score=31.75 Aligned_cols=129 Identities=13% Similarity=0.160 Sum_probs=84.2
Q ss_pred HHHhcCCCccceecccCCCCcHHHHHHHHcCCCceee--cCCcchHHHHHHHHHHHHHHhCCCCC-CceEEEeCcChHHH
Q 006454 321 VKQNYGERILIQVFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLGGSLA-DQRFLFLGAGEAGT 397 (644)
Q Consensus 321 v~~~fGp~~lIq~fEDf~~~nAf~lL~ryr~~~~~FN--DDiQGTaaVvLAgll~Alr~~g~~L~-d~riv~~GAGsAG~ 397 (644)
+-.+| .++++ .-.+. +.+.+.|.+|- ++||.| || .--=.=+||=++.-.+.. ++++ +.||.++|-|.
T Consensus 87 vls~~-~D~iv--iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~-g~l~~gl~va~vGD~~--- 156 (307)
T 3tpf_A 87 VIGAM-VDFVM--MRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWN-KMQNGIAKVAFIGDSN--- 156 (307)
T ss_dssp HHHHH-SSEEE--EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTT-CCGGGCCEEEEESCSS---
T ss_pred HHHHh-CCEEE--EecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCC---
Confidence 44557 56554 35654 45566677765 689998 65 455566777777655554 4799 99999999974
Q ss_pred HHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcccc----CCCCCHHHHHhccCCcEEEEcc
Q 006454 398 GIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH----EPVKELVDAVNAIKPTILIGTS 472 (644)
Q Consensus 398 GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~----~~~~~L~eaV~~vkPtvLIG~S 472 (644)
-+|+-++.++.+ .|+ +|.++-.+|+.-.. .+-...+.+|+.. ....++.|+|+. .||+.-..
T Consensus 157 ~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDvvyt~~ 222 (307)
T 3tpf_A 157 NMCNSWLITAAI-LGF-------EISIAMPKNYKISP---EIWEFAMKQALISGAKISLGYDKFEALKD--KDVVITDT 222 (307)
T ss_dssp HHHHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHTCEEEEESCHHHHHTT--CSEEEECC
T ss_pred ccHHHHHHHHHH-cCC-------EEEEECCCccCCCH---HHHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEecC
Confidence 488888887766 474 68899888874321 1111222333321 123689999997 99998654
No 451
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=47.94 E-value=16 Score=39.45 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=28.8
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
-.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRE-----LGR-------SVHVIETAG 49 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 345689999999999999988875 264 588999864
No 452
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=47.90 E-value=14 Score=39.43 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
.+|||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAAR-----HN-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 579999999999999988865 25 4699999863
No 453
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=47.74 E-value=40 Score=33.16 Aligned_cols=77 Identities=16% Similarity=0.247 Sum_probs=41.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc----------cc
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------EH 450 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----------~~ 450 (644)
++++.++||.||++ ||...++..+.+ .| -+++++|++- +.++.....+.. |.
T Consensus 25 ~~~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~Dv 86 (283)
T 3v8b_A 25 NQPSPVALITGAGS---GIGRATALALAA-DG-------VTVGALGRTR-------TEVEEVADEIVGAGGQAIALEADV 86 (283)
T ss_dssp --CCCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESSH-------HHHHHHHHHHTTTTCCEEEEECCT
T ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHHHhcCCcEEEEEccC
Confidence 46678899999754 444455555544 36 3688888741 112222222111 11
Q ss_pred CCCCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 451 EPVKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 451 ~~~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
.+..++.++++.+ ++|+||=..+..
T Consensus 87 ~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 87 SDELQMRNAVRDLVLKFGHLDIVVANAGIN 116 (283)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 1223455666655 799999777754
No 454
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=47.62 E-value=14 Score=36.58 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=26.8
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
...+|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAAR-----AQL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 45689999999999999988865 253 57788854
No 455
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=47.61 E-value=21 Score=35.85 Aligned_cols=93 Identities=12% Similarity=0.118 Sum_probs=50.2
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhc
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 462 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 462 (644)
+..||.|+|+|..|...++.+... .+. +-+.++|++ ..+ ...+.+.|-- .....++.|+++.
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~----~~~------~~~av~d~~----~~~---~~~~a~~~~~-~~~~~~~~~ll~~ 65 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLA----GNG------EVVAVSSRT----LES---AQAFANKYHL-PKAYDKLEDMLAD 65 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHH----CSE------EEEEEECSC----SST---TCC---CCCC-SCEESCHHHHHTC
T ss_pred CceEEEEEechHHHHHHHHHHHhC----CCc------EEEEEEcCC----HHH---HHHHHHHcCC-CcccCCHHHHhcC
Confidence 447999999999887666555321 121 224466763 221 2222222210 0124689999997
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 006454 463 IKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 496 (644)
Q Consensus 463 vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 496 (644)
-++|+++ +++.. .+..++++...+. .++++.
T Consensus 66 ~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 96 (329)
T 3evn_A 66 ESIDVIY-VATIN-QDHYKVAKAALLA-GKHVLV 96 (329)
T ss_dssp TTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCCCEEE-ECCCc-HHHHHHHHHHHHC-CCeEEE
Confidence 7789887 55544 4555655544332 355554
No 456
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=47.45 E-value=8.6 Score=37.35 Aligned_cols=34 Identities=29% Similarity=0.417 Sum_probs=26.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
...+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 45689999999999999988864 253 57788854
No 457
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=47.42 E-value=30 Score=34.45 Aligned_cols=102 Identities=15% Similarity=0.228 Sum_probs=53.5
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHH
Q 006454 382 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 460 (644)
Q Consensus 382 L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 460 (644)
++..+|+|.|| |-.|..+++.|++ .|. .+++++|+..--. ....+.... +.-+..+...+.+++
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~~~~--~~~~~~~~~--~~~d~~~~~~~~~~~ 108 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALND-----KGI------TDILVVDNLKDGT--KFVNLVDLN--IADYMDKEDFLIQIM 108 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHH-----TTC------CCEEEEECCSSGG--GGGGTTTSC--CSEEEEHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-----CCC------cEEEEEecCCCcc--hhhcccCce--EeeecCcHHHHHHHH
Confidence 45678999998 8788777777764 251 4578887642100 000111100 111111112355555
Q ss_pred hcc---CCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 461 NAI---KPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 461 ~~v---kPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
+.. ++|++|=+.+.... -|..+++++.+..- .|||.=|
T Consensus 109 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS 163 (357)
T 2x6t_A 109 AGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 163 (357)
T ss_dssp TTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred hhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcc
Confidence 532 69999988876532 03457777766554 7887543
No 458
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=47.36 E-value=17 Score=37.04 Aligned_cols=44 Identities=18% Similarity=0.116 Sum_probs=27.1
Q ss_pred HHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 372 ISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 372 l~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
+.|+...+.--..++++|.|+|..|...+.++.. .|. +++.+|+
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~-----~Ga-------~Vi~~~~ 221 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA-----TGA-------EVIVTSS 221 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEec
Confidence 3444323333457899999999777666554432 362 5777775
No 459
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=47.34 E-value=24 Score=33.84 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=41.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhh------hc-cccCCC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP------WA-HEHEPV 453 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~------fA-~~~~~~ 453 (644)
+|++.++||.||+. ||...++..+.+ .| -+++++|++- +.++..... +. -+..+.
T Consensus 9 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~d~ 70 (263)
T 3ak4_A 9 DLSGRKAIVTGGSK---GIGAAIARALDK-AG-------ATVAIADLDV-------MAAQAVVAGLENGGFAVEVDVTKR 70 (263)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHTCTTCCEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHHhcCCeEEEEeCCCH
Confidence 47788999999753 444455555544 36 3588887741 111111111 11 111122
Q ss_pred CCHHHHHhcc-----CCcEEEEccCCC
Q 006454 454 KELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 454 ~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
.++.++++.+ ++|+||=..+..
T Consensus 71 ~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 97 (263)
T 3ak4_A 71 ASVDAAMQKAIDALGGFDLLCANAGVS 97 (263)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 3455666644 799999877654
No 460
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=47.24 E-value=9.9 Score=36.47 Aligned_cols=99 Identities=17% Similarity=0.134 Sum_probs=55.5
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-ccCCCCCHHHHHhc
Q 006454 385 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 462 (644)
Q Consensus 385 ~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 462 (644)
.+|+|.|| |-.|..+++.|++. ..| .+++.++++. ++...+......+.+ +-.+..+|.++++.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~ 66 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKK---VPA-------SQIIAIVRNV----EKASTLADQGVEVRHGDYNQPESLQKAFAG 66 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTTHHHHHTTCEEEECCTTCHHHHHHHTTT
T ss_pred CeEEEEcCCchHHHHHHHHHHHh---CCC-------CeEEEEEcCH----HHHhHHhhcCCeEEEeccCCHHHHHHHHhc
Confidence 36899998 88887777776531 002 3588887741 111101111111111 11222457777774
Q ss_pred cCCcEEEEccCCCC------CCCHHHHHHHHcCCCCcEEEecC
Q 006454 463 IKPTILIGTSGQGR------TFTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 463 vkPtvLIG~S~~~g------~Fteevv~~Ma~~~erPIIFaLS 499 (644)
+|++|=+++..- .-+..+++++.+..-+.|||.=|
T Consensus 67 --~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 67 --VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp --CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred --CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998877531 02456778887766667887543
No 461
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=47.22 E-value=46 Score=33.05 Aligned_cols=78 Identities=14% Similarity=0.179 Sum_probs=43.5
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-----------
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------- 448 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----------- 448 (644)
.+|+++++||.||+. ||...|+..+.+ .| -+++++|++- +.++.....+..
T Consensus 37 ~~l~~k~vlVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~ 98 (293)
T 3rih_A 37 FDLSARSVLVTGGTK---GIGRGIATVFAR-AG-------ANVAVAARSP-------RELSSVTAELGELGAGNVIGVRL 98 (293)
T ss_dssp TCCTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESSG-------GGGHHHHHHHTTSSSSCEEEEEC
T ss_pred cCCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEECCH-------HHHHHHHHHHHhhCCCcEEEEEE
Confidence 457888999999753 344445555544 36 3688888751 123222222211
Q ss_pred ccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 449 EHEPVKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 449 ~~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
|..+..++.++++.+ +.|+||=..+..
T Consensus 99 Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 130 (293)
T 3rih_A 99 DVSDPGSCADAARTVVDAFGALDVVCANAGIF 130 (293)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred eCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 111123455556555 789999776653
No 462
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=47.14 E-value=16 Score=38.55 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=26.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+.++||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 45799999999999999877653 5 469999983
No 463
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=47.13 E-value=23 Score=33.97 Aligned_cols=78 Identities=18% Similarity=0.207 Sum_probs=41.8
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhc-------cccCC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-------HEHEP 452 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-------~~~~~ 452 (644)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++- +.+......+. -|..+
T Consensus 2 ~~l~gk~vlVTGas~---gIG~a~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~~ 63 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQ---GIGKAIAARLAA-DG-------ATVIVSDINA-------EGAKAAAASIGKKARAIAADISD 63 (247)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEECSCH-------HHHHHHHHHHCTTEEECCCCTTC
T ss_pred CCcCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHhCCceEEEEcCCCC
Confidence 357889999999753 344444444444 36 3588887641 11222221111 01112
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 453 VKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 453 ~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
..++.++++.+ +.|+||=..+..
T Consensus 64 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 91 (247)
T 3rwb_A 64 PGSVKALFAEIQALTGGIDILVNNASIV 91 (247)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCC
Confidence 23455555544 799999776643
No 464
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=47.04 E-value=16 Score=35.03 Aligned_cols=77 Identities=19% Similarity=0.231 Sum_probs=42.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc-------ccCCC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-------EHEPV 453 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-------~~~~~ 453 (644)
+++++++||.||++ ||...++..+.+ .|. +++++|++- +.++.....+.. +..+.
T Consensus 6 ~l~gk~~lVTGas~---gIG~a~a~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d~ 67 (248)
T 3op4_A 6 NLEGKVALVTGASR---GIGKAIAELLAE-RGA-------KVIGTATSE-------SGAQAISDYLGDNGKGMALNVTNP 67 (248)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEEESSH-------HHHHHHHHHHGGGEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCH-------HHHHHHHHHhcccceEEEEeCCCH
Confidence 57788999999754 344445555544 363 588887641 112222222111 11222
Q ss_pred CCHHHHHhcc-----CCcEEEEccCCC
Q 006454 454 KELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 454 ~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
.++.++++.+ +.|+||=..+..
T Consensus 68 ~~v~~~~~~~~~~~g~iD~lv~nAg~~ 94 (248)
T 3op4_A 68 ESIEAVLKAITDEFGGVDILVNNAGIT 94 (248)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455556554 799999887754
No 465
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=46.85 E-value=60 Score=30.94 Aligned_cols=39 Identities=18% Similarity=0.260 Sum_probs=25.0
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 379 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 379 g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
..+|++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 9 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (260)
T 2zat_A 9 RKPLENKVALVTASTD---GIGLAIARRLAQ-DG-------AHVVVSSRK 47 (260)
T ss_dssp -CTTTTCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 3568889999999753 444445555544 36 368888874
No 466
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=46.84 E-value=16 Score=39.29 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=26.7
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+.+|+|+|||.+|+..|-.|.+ .|+ ++.++|++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 56789999999999999988865 365 36677764
No 467
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=46.81 E-value=15 Score=38.44 Aligned_cols=32 Identities=19% Similarity=0.397 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+|+|+|||.||+-.|-.|.+ .|+ ++.++|+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~-----~G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQ-----HDV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------eEEEEcCC
Confidence 589999999999999988765 364 68888875
No 468
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=46.79 E-value=17 Score=38.99 Aligned_cols=37 Identities=27% Similarity=0.411 Sum_probs=29.1
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 431 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi 431 (644)
...+|+|+|||.||+..|..+.. .|+ ++.++|+..-+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~~ 127 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIKF 127 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEecccc
Confidence 35789999999999999988865 363 68899886443
No 469
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=46.78 E-value=51 Score=31.95 Aligned_cols=39 Identities=26% Similarity=0.373 Sum_probs=26.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
.+|+++++||.||++ ||...++..+.+ .| -+++++|+.+
T Consensus 7 ~~l~~k~~lVTGas~---GIG~a~a~~la~-~G-------~~V~~~~r~~ 45 (277)
T 3tsc_A 7 GKLEGRVAFITGAAR---GQGRAHAVRMAA-EG-------ADIIAVDIAG 45 (277)
T ss_dssp CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEECCS
T ss_pred cccCCCEEEEECCcc---HHHHHHHHHHHH-cC-------CEEEEEeccc
Confidence 468889999999754 444455555544 36 3688999854
No 470
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=46.77 E-value=17 Score=38.49 Aligned_cols=33 Identities=21% Similarity=0.425 Sum_probs=27.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+..++|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGA-----LG-------KRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----Cc-------CEEEEEeCC
Confidence 4689999999999999988865 35 468999984
No 471
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=46.73 E-value=34 Score=33.71 Aligned_cols=77 Identities=17% Similarity=0.176 Sum_probs=41.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhcc----------cc
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------EH 450 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----------~~ 450 (644)
+|+++++||.||++ ||...++..+.+ .|. +++++|++- +.+......+.. +.
T Consensus 5 ~l~gk~vlVTGas~---GIG~aia~~la~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~Dv 66 (280)
T 3tox_A 5 RLEGKIAIVTGASS---GIGRAAALLFAR-EGA-------KVVVTARNG-------NALAELTDEIAGGGGEAAALAGDV 66 (280)
T ss_dssp TTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEECCSCH-------HHHHHHHHHHTTTTCCEEECCCCT
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CCC-------EEEEEECCH-------HHHHHHHHHHHhcCCcEEEEECCC
Confidence 57788999999753 344445555444 363 588887641 112222222211 11
Q ss_pred CCCCCHHHHHhcc-----CCcEEEEccCCC
Q 006454 451 EPVKELVDAVNAI-----KPTILIGTSGQG 475 (644)
Q Consensus 451 ~~~~~L~eaV~~v-----kPtvLIG~S~~~ 475 (644)
.+..++.++++.+ +.|+||=..+..
T Consensus 67 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 96 (280)
T 3tox_A 67 GDEALHEALVELAVRRFGGLDTAFNNAGAL 96 (280)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 1112445555544 799999877754
No 472
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=46.72 E-value=17 Score=38.69 Aligned_cols=38 Identities=8% Similarity=0.045 Sum_probs=28.3
Q ss_pred CceEEEeCcChHHHHHHHHHHH-HHHH-hcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIAL-EISK-QTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~-~m~~-~~Gls~eeAr~~i~lvDs~ 428 (644)
..+|+|+|||.||+..|..+.. .... ..| .+|.++|+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g-------~~V~lie~~ 42 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLD-------MAVDMLEML 42 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCC-------EEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCC-------CeEEEEecC
Confidence 4689999999999999999976 4210 002 468999986
No 473
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=46.61 E-value=19 Score=37.88 Aligned_cols=33 Identities=24% Similarity=0.189 Sum_probs=27.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+-.++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 35799999999999999888653 5 468999986
No 474
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=46.48 E-value=17 Score=38.27 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=27.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
+..++|+|||.||+..|..+.+ .| .++.++|+++-
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G-------~~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AK-------YNVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCCC
Confidence 3579999999999999988864 35 36999996553
No 475
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=46.48 E-value=35 Score=34.41 Aligned_cols=44 Identities=18% Similarity=0.222 Sum_probs=29.1
Q ss_pred HHHHHHHhCCCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 371 LISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 371 ll~Alr~~g~~L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
.+.|++..+ .-.+++++|.|| |..|..++.++.. .| -+++.+|+
T Consensus 158 a~~~l~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-------a~V~~~~~ 202 (347)
T 2hcy_A 158 VYKALKSAN-LMAGHWVAISGAAGGLGSLAVQYAKA-----MG-------YRVLGIDG 202 (347)
T ss_dssp HHHHHHTTT-CCTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEEC
T ss_pred HHHHHHhcC-CCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CcEEEEcC
Confidence 355565442 235689999999 7778777766543 35 25888875
No 476
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=46.27 E-value=11 Score=40.44 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=18.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHH
Q 006454 386 RFLFLGAGEAGTGIAELIALEI 407 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m 407 (644)
-||++|||.+|+++|-.|.+..
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~ 62 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDAL 62 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH
T ss_pred cEEEEcccHHHHHHHHHHHhcC
Confidence 4899999999999998887653
No 477
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=46.25 E-value=47 Score=33.19 Aligned_cols=47 Identities=21% Similarity=0.188 Sum_probs=30.4
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 369 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 369 Agll~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
...+.+++..+.+ ..++++|+|||+.|.-.+.++..+ .| .+++.+|+
T Consensus 150 ~ta~~~l~~~~~~-~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 150 VTTYKAIKVSGVK-PGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeEEeeecccCCC-CCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 3445667766653 467999999998885544444322 23 46888876
No 478
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=46.20 E-value=89 Score=30.76 Aligned_cols=38 Identities=18% Similarity=0.316 Sum_probs=25.7
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+|+++++||.||++ ||...++..+.+ .| -+++++|+.
T Consensus 24 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~~~ 61 (299)
T 3t7c_A 24 GKVEGKVAFITGAAR---GQGRSHAITLAR-EG-------ADIIAIDVC 61 (299)
T ss_dssp CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEECC
T ss_pred cccCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEecc
Confidence 468889999999864 444445555544 36 368888875
No 479
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=46.19 E-value=20 Score=37.63 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=28.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
.+|||+|||.||+..|..|.+. ..| .++.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK---YPQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhh---CcC-------CcEEEEECCCC
Confidence 4899999999999999988763 012 47999998653
No 480
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=46.16 E-value=36 Score=32.13 Aligned_cols=70 Identities=13% Similarity=0.174 Sum_probs=38.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhcc-
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI- 463 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v- 463 (644)
+++||.||+. ||...++..+.+ .| -+++++|++- . .+.. .+.-+.....++.++++.+
T Consensus 2 k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~----~---~~~~---~~~~Dl~~~~~v~~~~~~~~ 60 (257)
T 1fjh_A 2 SIIVISGCAT---GIGAATRKVLEA-AG-------HQIVGIDIRD----A---EVIA---DLSTAEGRKQAIADVLAKCS 60 (257)
T ss_dssp CEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHTTCT
T ss_pred CEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCc----h---hhcc---ccccCCCCHHHHHHHHHHhC
Confidence 3688888743 444555555544 36 3588888741 1 1211 0111111123566777765
Q ss_pred -CCcEEEEccCCC
Q 006454 464 -KPTILIGTSGQG 475 (644)
Q Consensus 464 -kPtvLIG~S~~~ 475 (644)
++|+||=..+..
T Consensus 61 ~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 61 KGMDGLVLCAGLG 73 (257)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 789999877754
No 481
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=46.03 E-value=33 Score=32.45 Aligned_cols=37 Identities=11% Similarity=0.255 Sum_probs=23.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
++++.++||.||+. ||...|+..+.+ .| -+++++|++
T Consensus 10 ~l~~k~vlItGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 46 (260)
T 3awd_A 10 RLDNRVAIVTGGAQ---NIGLACVTALAE-AG-------ARVIIADLD 46 (260)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCEEEEeCCCc---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 57788999998742 344444444444 35 368888874
No 482
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=45.96 E-value=14 Score=35.61 Aligned_cols=31 Identities=16% Similarity=0.275 Sum_probs=23.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.|+|+|||.||+-.|..+.+ .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 68999999999988866654 353 57788864
No 483
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=45.89 E-value=42 Score=34.10 Aligned_cols=44 Identities=16% Similarity=0.076 Sum_probs=28.0
Q ss_pred HHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 373 SAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 373 ~Alr~~g~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
.++......-..++++|.|||..|...+.+... .|. ++++.+|+
T Consensus 180 ~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 180 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp HHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred HHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 334323333456899999999877766655433 263 47888875
No 484
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=45.87 E-value=50 Score=31.81 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=25.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+|+++++||.||++ ||...|+..+.+ .| -+++++|+.
T Consensus 7 ~l~gk~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~~~ 43 (287)
T 3pxx_A 7 RVQDKVVLVTGGAR---GQGRSHAVKLAE-EG-------ADIILFDIC 43 (287)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECC
T ss_pred ccCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CeEEEEccc
Confidence 57889999999864 444455555544 36 368899875
No 485
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=45.83 E-value=16 Score=39.20 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=26.8
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 382 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 382 L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
-.+..|+|+|||.+|+..|-.|.+ .|+ ++.++|++
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 43 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERL 43 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 456789999999999999988865 365 36666654
No 486
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=45.74 E-value=31 Score=34.75 Aligned_cols=90 Identities=16% Similarity=0.176 Sum_probs=50.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhhhhccccCCCCCHHHHHhccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 464 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 464 (644)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ . +......+.|- .....++.|+++.-+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----~---~~~~~~a~~~g--~~~~~~~~~~l~~~~ 65 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAA----NPDL------ELVVIADPF----I---EGAQRLAEANG--AEAVASPDEVFARDD 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS----H---HHHHHHHHTTT--CEEESSHHHHTTCSC
T ss_pred eEEEEECCcHHHHHHHHHHHh----CCCc------EEEEEECCC----H---HHHHHHHHHcC--CceeCCHHHHhcCCC
Confidence 589999999988776665543 1121 223466763 1 11222222221 112368999999777
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 006454 465 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 496 (644)
Q Consensus 465 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 496 (644)
+|+++ +++.. ....++++...+. .++|+.
T Consensus 66 ~D~V~-i~tp~-~~h~~~~~~al~~-gk~v~~ 94 (344)
T 3euw_A 66 IDGIV-IGSPT-STHVDLITRAVER-GIPALC 94 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHT-TCCEEE
T ss_pred CCEEE-EeCCc-hhhHHHHHHHHHc-CCcEEE
Confidence 99887 44544 4555555554433 355553
No 487
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=45.53 E-value=18 Score=37.40 Aligned_cols=34 Identities=24% Similarity=0.524 Sum_probs=27.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+.+|+|+|||.+|+..|..|.+ .| .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-----~g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-----KG-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEEecC
Confidence 4689999999999999988864 24 5788888853
No 488
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=45.52 E-value=44 Score=32.50 Aligned_cols=38 Identities=21% Similarity=0.286 Sum_probs=26.0
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 7 ~~l~~k~~lVTGas~---gIG~aia~~la~-~G-------~~V~~~~~~ 44 (286)
T 3uve_A 7 GRVEGKVAFVTGAAR---GQGRSHAVRLAQ-EG-------ADIIAVDIC 44 (286)
T ss_dssp CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEECC
T ss_pred cccCCCEEEEeCCCc---hHHHHHHHHHHH-CC-------CeEEEEecc
Confidence 468889999999864 444455555544 36 368889875
No 489
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=45.49 E-value=13 Score=37.78 Aligned_cols=36 Identities=31% Similarity=0.430 Sum_probs=29.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 381 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 381 ~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+|++.++||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57889999999999999999988753 5 458888864
No 490
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=45.40 E-value=37 Score=33.37 Aligned_cols=99 Identities=19% Similarity=0.245 Sum_probs=54.1
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhhh------hhcc-ccCCCCCHH
Q 006454 386 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK------PWAH-EHEPVKELV 457 (644)
Q Consensus 386 riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~------~fA~-~~~~~~~L~ 457 (644)
+|+|.|| |-.|..+++.|++ .| .+++++|+.. .+..+.+...+. .+.. +..+..++.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 66 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQ-----NG-------HDVIILDNLC---NSKRSVLPVIERLGGKHPTFVEGDIRNEALMT 66 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCTTHHHHHHHHHTSCCEEEECCTTCHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEecCC---CcchhHHHHHHhhcCCcceEEEccCCCHHHHH
Confidence 6888886 6666666666654 25 3577787531 111111111110 1111 111223577
Q ss_pred HHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 006454 458 DAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 499 (644)
Q Consensus 458 eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 499 (644)
++++..++|++|=+.+.... -|..++++|.+..-+.|||.=|
T Consensus 67 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 124 (338)
T 1udb_A 67 EILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSS 124 (338)
T ss_dssp HHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred HHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 78877789999988775421 1234677776655567888543
No 491
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=45.39 E-value=43 Score=34.09 Aligned_cols=37 Identities=14% Similarity=0.079 Sum_probs=25.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
..-..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 33356899999999887766655432 253 47888875
No 492
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=45.23 E-value=13 Score=37.01 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=26.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+|+|+|||.+|+.+|..|.+.. ..| -++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 37999999999999998886410 024 368888876
No 493
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=45.17 E-value=23 Score=35.85 Aligned_cols=47 Identities=26% Similarity=0.229 Sum_probs=30.6
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 006454 369 AGLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 427 (644)
Q Consensus 369 Agll~Alr~~g~~L~d~riv~~GA-GsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs 427 (644)
+..+.|+...+.--..++++|.|| |..|..++.++.. .|. +++.+|+
T Consensus 145 ~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 192 (342)
T 4eye_A 145 HTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKG-----MGA-------KVIAVVN 192 (342)
T ss_dssp HHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH-----cCC-------EEEEEeC
Confidence 344445544444456789999998 8888777665543 362 5777776
No 494
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=45.08 E-value=13 Score=38.12 Aligned_cols=35 Identities=17% Similarity=0.398 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 431 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GLi 431 (644)
..++||+|+|.||+..|..+.+ .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 3589999999999999888842 22 79999986543
No 495
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=45.06 E-value=19 Score=37.88 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 384 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 384 d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~-----~G-------~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ-----LG-------FNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 3579999999999999988865 25 3699999853
No 496
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=45.01 E-value=85 Score=30.35 Aligned_cols=38 Identities=16% Similarity=0.170 Sum_probs=25.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 380 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 380 ~~L~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
.+|+++++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 17 ~~l~~k~~lVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 54 (267)
T 1vl8_A 17 FDLRGRVALVTGGSR---GLGFGIAQGLAE-AG-------CSVVVASRN 54 (267)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cCCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 467888999999753 455555555554 36 358888874
No 497
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=44.97 E-value=20 Score=36.93 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 385 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 385 ~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
..|||+|||.+|+.+|-.|.+.. -| .++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCCC
Confidence 57999999999999998886520 14 3689999863
No 498
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=44.90 E-value=15 Score=40.09 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=28.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 006454 383 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 429 (644)
Q Consensus 383 ~d~riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~G 429 (644)
.+.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 34689999999999999988862 1363 689999864
No 499
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=44.73 E-value=15 Score=38.28 Aligned_cols=35 Identities=14% Similarity=0.218 Sum_probs=27.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 430 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~GL 430 (644)
+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999887531 12 57999998653
No 500
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=44.67 E-value=20 Score=36.45 Aligned_cols=33 Identities=27% Similarity=0.367 Sum_probs=24.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 006454 386 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 428 (644)
Q Consensus 386 riv~~GAGsAG~GIA~ll~~~m~~~~Gls~eeAr~~i~lvDs~ 428 (644)
+|+|+|||.||+..|-.|.+. ..| .++.++|+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G-------~~V~v~E~~ 34 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPL-------WAIDIVEKN 34 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTT-------SEEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCC-------CCEEEEECC
Confidence 699999999999999888653 014 357777765
Done!