BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006457
(644 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/660 (71%), Positives = 554/660 (83%), Gaps = 24/660 (3%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
SK S+ + ++S N NLTTLFNKYVDK NVFSWNSVIA+LAR GDSVEALRAFS
Sbjct: 82 FSKRRSICAGAVLRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFS 141
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
SMRKLSL P RSTFPCAIKSCSAL DLHSG+QAHQQA IFGF D+FVSSAL+DMYSKCG
Sbjct: 142 SMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCG 201
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
EL DAR LFDEI R NIVSWTSM+TGYVQND+A ALLLFKEFL+EES SE
Sbjct: 202 ELRDARTLFDEISHR--NIVSWTSMITGYVQNDDAHRALLLFKEFLVEES----GSEGDG 255
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
V VD +A+ SVLSACSRV+ +TEG HGF+IKRGF+ ++GV NTL+DAYA+ G + VS
Sbjct: 256 EVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVS 315
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
R+VFDGM E+D ++WNSIIA+YAQNG++ E++++F +MVK ++ NAVTLSAVLLA AH
Sbjct: 316 RRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAH 375
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
G RLGKCIHDQVIKM LE +V VGTSIIDMYCKCG+V++ARKAF++M+EKNV+SW+AM
Sbjct: 376 SGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAM 435
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
+AGYGMH A+EAL++FY+M AGV+PNYITFVSVL+ACSHAGL++EGWHW M HEF+
Sbjct: 436 VAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFD 495
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
+EPGVEHYGCMVDLLGRAG LKEA+DLI+GMK++ DFVVWG+LLGACR+HKNVDLGEI+A
Sbjct: 496 VEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISA 555
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
+KLFEL+P NCGY+VLLSNIYA+AGRWEDVER R LMKN L K PGFSLV+++G+VH F
Sbjct: 556 RKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVF 615
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
LVGD+EHPQHEKIYEYLE+L++KLQEVGYV DMTSV+HDV EEKEM LR+HSEKLA
Sbjct: 616 LVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAF 675
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCHT I+ ISK+VDREIVVRDSKRFH+F+DGLCSCGDYW
Sbjct: 676 GIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 983 bits (2541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/643 (71%), Positives = 547/643 (85%), Gaps = 24/643 (3%)
Query: 20 STNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCA 79
S ++NL T F KYVDK+NV SWNSVIADLARGGDSVEALRAFSS+RKL L PTRS+FPC
Sbjct: 1089 SLSSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCT 1148
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
IKSCSAL DL SG+ +HQQAF+FGF D+FVSSALIDMYSKCG+L DAR LFDEIP +R
Sbjct: 1149 IKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP--LR 1206
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+VSWTSM+TGYVQN+ A ALLLFK+FL EE+E E+ +NV +DSV + SVLSACS
Sbjct: 1207 NVVSWTSMITGYVQNEQADNALLLFKDFLEEETEV----EDGNNVPLDSVVMVSVLSACS 1262
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
RV+ G+TEG HGFV+K+GFD +GVGNTL+DAYA+ G VS+KVFD M EKD ++WNS
Sbjct: 1263 RVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNS 1322
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+IA+YAQ+GL+ EAL+VF MV+ V+ NAVTLSAVLLA AH G LR GKCIHDQVIKM
Sbjct: 1323 MIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKM 1382
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
DLE +V VGTSIIDMYCKCG+V++A+K F++MKEKNV+SWTAM+AGYGMH RA+EALD+F
Sbjct: 1383 DLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIF 1442
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
YKM++AGV+PNYITFVSVL+ACSHAGLV+EGWHW N M H+++IEPG+EHYGCMVDL GR
Sbjct: 1443 YKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGR 1502
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
AG L EAY+LI+ MK+K DFVVWGSLLGACRIHKNVDLGEIAA+KLFEL+P+NCGY+VLL
Sbjct: 1503 AGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLL 1562
Query: 500 SNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYL 559
SN+YA+AGRW DVER R LMKNR+L K PGFSLVEL+G+VH FLVGDKEHP HE IY+YL
Sbjct: 1563 SNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYL 1622
Query: 560 EELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NL 601
E+L ++LQ++GYV +MTSV+HDVD+EEKE+ LR+HSEKLA NL
Sbjct: 1623 EKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNL 1682
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
RVCGDCHTVI+LISK+V R+ VVRDSKRFH+FKDG+CSCGDYW
Sbjct: 1683 RVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 190/386 (49%), Gaps = 46/386 (11%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H + G D ++ LI +YS G ++ A LF +I +W ++
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC--TFTWNLIIRANT 101
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N + +AL+L+K + C G + D V+ AC+ + + HG
Sbjct: 102 INGLSEQALMLYKNMV-----CQG-------IAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGH-------------------------------VDV 241
+IK GF +V V N LID Y + GH +
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R++FD + K+ V+W ++I Y +N EAL++F +M ++ ++ N T+ +++ A
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRM-QAENIFPNEYTMVSLIKACT 268
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+G+L LG+ IHD IK +E V +GT++IDMY KCG + A + F M K++ +W +
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MI G+H +EAL+LF +M + V+P+ ITF+ VL AC H V+EG + M +
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHY 388
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAY 447
I P EHY CM +L R+ L EA+
Sbjct: 389 GIAPIPEHYECMTELYARSNNLDEAF 414
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 149/303 (49%), Gaps = 46/303 (15%)
Query: 38 VFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ 97
F+WN +I G S +AL + +M + + TFP IK+C+ + GK H
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 98 QAFIFGFHRDVFVSSALIDMYSK-------------------------------CGELSD 126
+GF DVFV + LID Y K CG+L +
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
AR++FDEIP +N+VSWT+M+ GY++N EAL LFK ++N+F
Sbjct: 210 ARRIFDEIPS--KNVVSWTAMINGYIRNQQPEEALELFKRM------------QAENIFP 255
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
+ + S++ AC+ + + + G H + IK + V +G LID Y++ G + + +VF
Sbjct: 256 NEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVF 315
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ M K TWNS+I +GL EAL++F +M + +VK +A+T VL A H+ +
Sbjct: 316 ETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEM-ERVNVKPDAITFIGVLCACVHIKNV 374
Query: 307 RLG 309
+ G
Sbjct: 375 KEG 377
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 142/310 (45%), Gaps = 37/310 (11%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +I+ G ++ + LI Y+ G + + +F + TWN II NGL+
Sbjct: 47 HAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLS 106
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+AL ++ MV + + T V+ A + + LGK +H +IK V V +
Sbjct: 107 EQALMLYKNMV-CQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNN 165
Query: 331 IIDMYCKCGQV-----------------------------DL--ARKAFNQMKEKNVRSW 359
+ID Y KCG DL AR+ F+++ KNV SW
Sbjct: 166 LIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSW 225
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
TAMI GY + + EAL+LF +M + PN T VS++ AC+ G++ G ++
Sbjct: 226 TAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG-RGIHDYAI 284
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
+ IE GV ++D+ + G +K+A ++ E M K+ W S++ + +H LG+
Sbjct: 285 KNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS-LPTWNSMITSLGVH---GLGQ 340
Query: 480 IAAKKLFELE 489
A E+E
Sbjct: 341 EALNLFSEME 350
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ NV SW ++I R EAL F M+ ++ P T IK+C+ + L G
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG 276
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H A V++ +ALIDMYSKCG + DA ++F+ +P+ +++ +W SM+T
Sbjct: 277 RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR--KSLPTWNSMITSLG 334
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ +EAL LF E NV D++ VL AC V + V EG
Sbjct: 335 VHGLGQEALNLFSEM------------ERVNVKPDAITFIGVLCAC--VHIKNVKEGCAY 380
Query: 213 FV 214
F
Sbjct: 381 FT 382
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
IH ++I+ L ++ +I +Y G++ A F Q++ +W +I ++
Sbjct: 46 IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGL 105
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSH-----AGLVQEGWHWLNTMGHEFNIEPG 426
+ +AL L+ M+ G+ + TF V+ AC++ G V G + + + F+ +
Sbjct: 106 SEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG----SLIKYGFSGDVF 161
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA-AKKL 485
V++ ++D + G + A + E M+V+ + V W +++ + G++ A+++
Sbjct: 162 VQNN--LIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGL-----ISCGDLQEARRI 213
Query: 486 FELEPN 491
F+ P+
Sbjct: 214 FDEIPS 219
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 980 bits (2534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/660 (70%), Positives = 554/660 (83%), Gaps = 27/660 (4%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
++ +S + V S + HS NL T F KYVDK+NV SWNSVIADLARGGDSVEALRAFS
Sbjct: 1948 ITYNSILFGVPSGREDHS---NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFS 2004
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
S+RKL L PTRS+FPC IKSCSAL DL SG+ +HQQAF+FGF D+FVSSALIDMYSKCG
Sbjct: 2005 SLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCG 2064
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+L DAR LFDEIP +RN+VSWTSM+TGYVQN+ A ALLLFK+FL EE+E E+ +
Sbjct: 2065 QLKDARALFDEIP--LRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEV----EDGN 2118
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
NV +DSV + SVLSACSRV+ G+TEG HGFV+K+GFD +GVGNTL+DAYA+ G VS
Sbjct: 2119 NVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVS 2178
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
+KVFD M EKD ++WNS+IA+YAQ+GL+ EAL+VF MV+ V+ NAVTLSAVLLA AH
Sbjct: 2179 KKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAH 2238
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
G LR GKCIHDQVIKMDLE +V VGTSIIDMYCKCG+V++A+K F++MKEKNV+SWTAM
Sbjct: 2239 AGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAM 2298
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
+AGYGMH RA+EALD+FYKM++AGV+PNYITFVSVL+ACSHAGLV+EGWHW N M H+++
Sbjct: 2299 VAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYD 2358
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
IEPG+EHYGCMVDL GRAG L EAY+LI+ MK+K DFVVWGSLLGACRIHKNVDLGEIAA
Sbjct: 2359 IEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAA 2418
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
+KLFEL+P+NCGY+VLLSN+YA+AGRW DVER R LMKNR+L K PGFSLVEL+G+VH F
Sbjct: 2419 QKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVF 2478
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
LVGDKEHP HE IY+YLE+L ++LQ++GYV +MTSV+HDVD+EEKE+ LR+HSEKLA
Sbjct: 2479 LVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAF 2538
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCHTVI+LISK+V R+ VVRDSKRFH+FKDG+CSCGDYW
Sbjct: 2539 GVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 190/386 (49%), Gaps = 46/386 (11%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H + G D ++ LI +YS G ++ A LF +I +W ++
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC--TFTWNLIIRANT 101
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N + +AL+L+K + C G + D V+ AC+ + + HG
Sbjct: 102 INGLSEQALMLYKNMV-----CQG-------IAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGH-------------------------------VDV 241
+IK GF +V V N LID Y + GH +
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R++FD + K+ V+W ++I Y +N EAL++F +M ++ ++ N T+ +++ A
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRM-QAENIFPNEYTMVSLIKACT 268
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+G+L LG+ IHD IK +E V +GT++IDMY KCG + A + F M K++ +W +
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MI G+H +EAL+LF +M + V+P+ ITF+ VL AC H V+EG + M +
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHY 388
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAY 447
I P EHY CM +L R+ L EA+
Sbjct: 389 GIAPIPEHYECMTELYARSNNLDEAF 414
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 149/303 (49%), Gaps = 46/303 (15%)
Query: 38 VFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ 97
F+WN +I G S +AL + +M + + TFP IK+C+ + GK H
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 98 QAFIFGFHRDVFVSSALIDMYSK-------------------------------CGELSD 126
+GF DVFV + LID Y K CG+L +
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
AR++FDEIP +N+VSWT+M+ GY++N EAL LFK ++N+F
Sbjct: 210 ARRIFDEIPS--KNVVSWTAMINGYIRNQQPEEALELFKRM------------QAENIFP 255
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
+ + S++ AC+ + + + G H + IK + V +G LID Y++ G + + +VF
Sbjct: 256 NEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVF 315
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ M K TWNS+I +GL EAL++F +M + +VK +A+T VL A H+ +
Sbjct: 316 ETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEM-ERVNVKPDAITFIGVLCACVHIKNV 374
Query: 307 RLG 309
+ G
Sbjct: 375 KEG 377
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 143/313 (45%), Gaps = 37/313 (11%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +I+ G ++ + LI Y+ G + + +F + TWN II NGL+
Sbjct: 47 HAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLS 106
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+AL ++ MV + + T V+ A + + LGK +H +IK V V +
Sbjct: 107 EQALMLYKNMV-CQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNN 165
Query: 331 IIDMYCKCGQV-----------------------------DL--ARKAFNQMKEKNVRSW 359
+ID Y KCG DL AR+ F+++ KNV SW
Sbjct: 166 LIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSW 225
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
TAMI GY + + EAL+LF +M + PN T VS++ AC+ G++ G ++
Sbjct: 226 TAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG-RGIHDYAI 284
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
+ IE GV ++D+ + G +K+A ++ E M K+ W S++ + +H LG+
Sbjct: 285 KNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS-LPTWNSMITSLGVH---GLGQ 340
Query: 480 IAAKKLFELEPNN 492
A E+E N
Sbjct: 341 EALNLFSEMERVN 353
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ NV SW ++I R EAL F M+ ++ P T IK+C+ + L G
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG 276
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H A V++ +ALIDMYSKCG + DA ++F+ +P+ +++ +W SM+T
Sbjct: 277 RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR--KSLPTWNSMITSLG 334
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ +EAL LF E NV D++ VL AC V + V EG
Sbjct: 335 VHGLGQEALNLFSEM------------ERVNVKPDAITFIGVLCAC--VHIKNVKEGCAY 380
Query: 213 FV 214
F
Sbjct: 381 FT 382
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
IH ++I+ L ++ +I +Y G++ A F Q++ +W +I ++
Sbjct: 46 IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGL 105
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSH-----AGLVQEGWHWLNTMGHEFNIEPG 426
+ +AL L+ M+ G+ + TF V+ AC++ G V G + + + F+ +
Sbjct: 106 SEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG----SLIKYGFSGDVF 161
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA-AKKL 485
V++ ++D + G + A + E M+V+ + V W +++ + G++ A+++
Sbjct: 162 VQNN--LIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGL-----ISCGDLQEARRI 213
Query: 486 FELEPN 491
F+ P+
Sbjct: 214 FDEIPS 219
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/643 (69%), Positives = 535/643 (83%), Gaps = 23/643 (3%)
Query: 20 STNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCA 79
+TNTNLTTLFNKY D+ +V+SWNS+IA+LARGGDS E+LRAFS MRKL + P RSTFPCA
Sbjct: 29 ATNTNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCA 88
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
IKSCSAL DL+SGKQAHQQA +FGF D+FVSSALIDMYSKCG+LS+AR LFDEIP+R
Sbjct: 89 IKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRR-- 146
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
NIV+WTS++TGYVQND+A EAL++FKEFL E+SE G + VDSVA+ SVLSACS
Sbjct: 147 NIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTS---VDSVAMISVLSACS 203
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
RV+ V+EG HG IK G D +GV NTL+DAYA+ G V +SRKVFD M EKD V+WNS
Sbjct: 204 RVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNS 263
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+IA+YAQNGL+ +A +VF M+K+ K N VTLS +LLA AH G LR+G C+HDQVIKM
Sbjct: 264 MIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKM 323
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
+VI+ TSIIDMYCKCGQ ++AR AF+ MKEKNVRSWTAMIAGYGMH AREALD+F
Sbjct: 324 GYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVF 383
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
Y+MI AGV+PNYITF+SVL+ACSHAG ++EGW W N M HE+N+EPGVEHYGCMVDLLGR
Sbjct: 384 YQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGR 443
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
AG +KEAY+LI+ MKV+ DFV+WGSLL ACRIHK+V+L EI+A++LF+L+P+NCGY+VLL
Sbjct: 444 AGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLL 503
Query: 500 SNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYL 559
+NIYA+AGRW+DVER R L+K+R L K PG+SLVEL+G+VH FLVGDKEHPQHEKIY+YL
Sbjct: 504 ANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYL 563
Query: 560 EELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NL 601
EEL+VKLQE GYV +M SV+HDVD+EEKEM +R+HSEKLA NL
Sbjct: 564 EELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNL 623
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
RVCGDCHTVI+LISK+V REI+VRD+KRFH+FKDGLCSCGDYW
Sbjct: 624 RVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/640 (67%), Positives = 530/640 (82%), Gaps = 21/640 (3%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
NL ++F KYVDK +V+SWNS+IAD AR GDS++AL AFSSMRKLSL P RSTFPC IKS
Sbjct: 36 ANLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKS 95
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
CS+L+DL +GKQ HQQAF+FG+ D+FV+SALIDMYSKCG L+DARKLFDEIP+R N+V
Sbjct: 96 CSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPER--NVV 153
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
SWTSM++GYVQN+ AREA+ LFKEFLL + E V VDSV + V+SAC+RV
Sbjct: 154 SWTSMISGYVQNERAREAVFLFKEFLLVD-ETDYDEIVGVGVGVDSVLLGCVISACARVC 212
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
V VTE HG +K+GF+ + VGNTL+DAYA+ G + VSRKVFDGM E D +WNS+IA
Sbjct: 213 VKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIA 272
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
+YAQNGL+ EA +F MVK +V+ NAVTLSAVLLA AH G L++GKCIHDQV+KM+LE
Sbjct: 273 VYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELE 332
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
++++VGTSI+DMYCKCG+V++ARKAF+++K KNV+SWT M+AGYGMH +EA+ +FY+M
Sbjct: 333 DNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEM 392
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
I+ G++PNYITFVSVL+ACSHAGL++EGWHW N M EF++EPG+EHY CMVDLLGRAG
Sbjct: 393 IRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGY 452
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
LKEAY LI+ MKVK DF+VWGSLLGACRIHKNV+LGEI+A+KLF+L+P+NCGY+VLLSNI
Sbjct: 453 LKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNI 512
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
YA+AGRW+DVER R LMKN L KTPG+S+VE +G+VH FLVGDKEHPQHEKIYEYL+EL
Sbjct: 513 YADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDEL 572
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVC 604
NVKLQEVGY+ ++TSV++DVD EEK M LR+HSEKLA NLR+C
Sbjct: 573 NVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRIC 632
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
GDCH I+LISK+V+REIV+RDSKRFH+FKDGLCSCGDYW
Sbjct: 633 GDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/657 (65%), Positives = 526/657 (80%), Gaps = 29/657 (4%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
SVS ++ + ++H+ NLTTLFN+YVDK +VFSWNSVIADLAR GDS EALRAFSSMRKL
Sbjct: 12 SVSRLL-HTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKL 70
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
SL PTRS+FPCAIK+CS+L D+ SGKQ HQQAF+FG+ D+FVSSALI MYS CG+L DA
Sbjct: 71 SLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDA 130
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
RK+FDEIP+R NIVSWTSM+ GY N NA +A+ LFK+ L+EE++ + +F+D
Sbjct: 131 RKVFDEIPKR--NIVSWTSMIRGYDLNGNALDAVSLFKDLLIEEND------DDATMFLD 182
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH--VDVSRKV 245
S+ + SV+SACSRV G+TE H FVIKRGFD V VGNTL+DAYA+GG V V+RK+
Sbjct: 183 SMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKI 242
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD +++KD V++NSI+++YAQ+G++ EA DVF +++K V N +TLS VLLA++H G
Sbjct: 243 FDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGA 302
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
LR+GKCIHDQVI+M LE+ VIVGTSIIDMYCKCG+V+ AR AF++MK KNVRSWTAMIAG
Sbjct: 303 LRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAG 362
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
YGMH A +AL+LF MI +GVRPNYITFVSVL+ACSHAGL GWHW N M F +EP
Sbjct: 363 YGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEP 422
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
G+EHYGCMVDLLGRAG L++AYDLI+ MK++ D ++W SLL ACRIHKNV+L EI+ +L
Sbjct: 423 GLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARL 482
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
FEL+P+NCGY++LLS+IYA++GRW+DVER R MKNR L K PGFSL+EL G+VH FL+G
Sbjct: 483 FELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIG 542
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
D+EHPQ EKIYE+L ELN KL E GYV++ +SV HDVD+EEKEMTLR+HSEKLA
Sbjct: 543 DEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIM 602
Query: 600 ------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH VI+LISK+VDRE VVRD+KRFH+FKDG CSCGDYW
Sbjct: 603 NTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/657 (65%), Positives = 529/657 (80%), Gaps = 29/657 (4%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
SVS ++ + ++H+ NLTTLFN+YVDK +VFSWNSVIADLAR GDS EAL AFSSMRKL
Sbjct: 12 SVSRLL-HTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKL 70
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
SL PTRS+FPCAIK+CS+L D+ SGKQ HQQAF+FG+ D+FVSSALI MYS CG+L DA
Sbjct: 71 SLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDA 130
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
RK+FDEIP+R NIVSWTSM+ GY N NA +A+ LFK+ L++E++ + D +F+D
Sbjct: 131 RKVFDEIPKR--NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEND------DDDAMFLD 182
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH--VDVSRKV 245
S+ + SV+SACSRV G+TE H FVIKRGFD V VGNTL+DAYA+GG V V+RK+
Sbjct: 183 SMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKI 242
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD +++KD V++NSI+++YAQ+G++ EA +VF ++VK+ V NA+TLS VLLA++H G
Sbjct: 243 FDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGA 302
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
LR+GKCIHDQVI+M LE+ VIVGTSIIDMYCKCG+V+ ARKAF++MK KNVRSWTAMIAG
Sbjct: 303 LRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAG 362
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
YGMH A +AL+LF MI +GVRPNYITFVSVL+ACSHAGL EGW W N M F +EP
Sbjct: 363 YGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEP 422
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
G+EHYGCMVDLLGRAG L++AYDLI+ MK+K D ++W SLL ACRIHKNV+L EI+ +L
Sbjct: 423 GLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARL 482
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
FEL+ +NCGY++LLS+IYA+AGRW+DVER R +MKNR L K PGFSL+EL G+VH FL+G
Sbjct: 483 FELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIG 542
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
D+EHPQ EKIYE+L ELN KL E GYV++ +SV HDVD+EEKEMTLR+HSEKLA
Sbjct: 543 DEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIM 602
Query: 600 ------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH VI+LISK+VDRE VVRD+KRFH+FKDG CSCGDYW
Sbjct: 603 NTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/657 (65%), Positives = 529/657 (80%), Gaps = 29/657 (4%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
SVS ++ + ++H+ NLTTLFN+YVDK +VFSWNSVIADLAR GDS EAL AFSSMRKL
Sbjct: 12 SVSRLL-HTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKL 70
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
SL PTRS+FPCAIK+CS+L D+ SGKQ HQQAF+FG+ D+FVSSALI MYS CG+L DA
Sbjct: 71 SLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDA 130
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
RK+FDEIP+R +IVSWTSM+ GY N NA +A+ LFK+ L++E++ + D +F+D
Sbjct: 131 RKVFDEIPKR--DIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEND------DDDAMFLD 182
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH--VDVSRKV 245
S+ + SV+SACSRV G+TE H FVIKRGFD V VGNTL+DAYA+GG V V+RK+
Sbjct: 183 SMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKI 242
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD +++KD V++NSI+++YAQ+G++ EA +VF ++VK+ V NA+TLS VLLA++H G
Sbjct: 243 FDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGA 302
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
LR+GKCIHDQVI+M LE+ VIVGTSIIDMYCKCG+V+ ARKAF++MK KNVRSWTAMIAG
Sbjct: 303 LRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAG 362
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
YGMH A +AL+LF MI +GVRPNYITFVSVL+ACSHAGL EGW W N M F +EP
Sbjct: 363 YGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEP 422
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
G+EHYGCMVDLLGRAG L++AYDLI+ MK+K D ++W SLL ACRIHKNV+L EI+ +L
Sbjct: 423 GLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARL 482
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
FEL+ +NCGY++LLS+IYA+AGRW+DVER R +MKNR L K PGFSL+EL G+VH FL+G
Sbjct: 483 FELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIG 542
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
D+EHPQ EKIYE+L ELN KL E GYV++ +SV HDVD+EEKEMTLR+HSEKLA
Sbjct: 543 DEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIM 602
Query: 600 ------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH VI+LISK+VDRE VVRD+KRFH+FKDG CSCGDYW
Sbjct: 603 NTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
>gi|356570245|ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g26782, mitochondrial-like [Glycine max]
Length = 555
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/538 (64%), Positives = 426/538 (79%), Gaps = 30/538 (5%)
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
+D+R LFDEIP R ++VSWTS++ G VQND AR+A+ +FKE L+EES G+ E+ D V
Sbjct: 30 NDSRHLFDEIPDR--SVVSWTSIIAGCVQNDRARDAVRVFKELLVEES---GSVESEDGV 84
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
FVDSV + V+SA S++ GVTEG HG VIKRGF+ VGVGNTL+DAYA+ G + V+ K
Sbjct: 85 FVDSVLLGCVVSAFSKLGWRGVTEGVHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVA-K 143
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VFDGM E D WNS+IA YAQNGL+AEA VF MVKS + + NAV + L G
Sbjct: 144 VFDGMNESDHYFWNSVIAEYAQNGLSAEAFSVFGDMVKSGNFRYNAVIMDXGLS-----G 198
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L+LGKCIH QVIKMDLE+SV VGTSI+D+YCKC +V++ARKAF+ MK KNV+SWTAM+A
Sbjct: 199 ALQLGKCIHHQVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVA 258
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
GYGMH RA+EA+++FYKMI++GV+PNYITFVSVL+ACSHAG+++EG HW N M EF +E
Sbjct: 259 GYGMHGRAKEAMEIFYKMIRSGVKPNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVE 318
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
PG+EHY CMVDLLGRAG L Y LI+ M K DF++WGSLLGACRIHKNV+LGEI+A+K
Sbjct: 319 PGIEHYLCMVDLLGRAGYLX-CYGLIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARK 377
Query: 485 LFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLV 544
LFEL+ +NCGY+VLLSNIYA+AGRW++VER R LMK+R L K PGFS+VEL+G++H LV
Sbjct: 378 LFELDXSNCGYYVLLSNIYADAGRWDEVERMRILMKSRGLLKAPGFSIVELKGRIHVLLV 437
Query: 545 GDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----- 599
GDKEHPQHEKIYEYL++ NVKLQE+GY+ + V+HDVD+EEK M LR+HSEKLA
Sbjct: 438 GDKEHPQHEKIYEYLDKXNVKLQELGYMPNXNMVLHDVDEEEKGMVLRVHSEKLAVAFGI 497
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDC+ VI+LI KVV+REIVVRDSKRFH+FK+G CSCGDYW
Sbjct: 498 MNSVPGSIIHIIKNLRICGDCNVVIKLIFKVVNREIVVRDSKRFHHFKEGSCSCGDYW 555
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 142/291 (48%), Gaps = 30/291 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM---RKLSLTPTRSTF------PC 78
LF++ D++ V SW S+IA + + +A+R F + S+ F C
Sbjct: 35 LFDEIPDRS-VVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSVLLGC 93
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
+ + S L + H GF R V V + L+D Y+K GE+ A K+FD + +
Sbjct: 94 VVSAFSKLGWRGVTEGVHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVA-KVFDGMNE-- 150
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
+ W S++ Y QN + EA +F + + S N ++V + LS
Sbjct: 151 SDHYFWNSVIAEYAQNGLSAEAFSVFGDMV-----------KSGNFRYNAVIMDXGLSGA 199
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ + + H VIK + V VG +++D Y + V+++RK FD M K+ +W
Sbjct: 200 LQ-----LGKCIHHQVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWT 254
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+++A Y +G A EA+++F +M++S VK N +T +VL A +H G+L+ G
Sbjct: 255 AMVAGYGMHGRAKEAMEIFYKMIRS-GVKPNYITFVSVLAACSHAGMLKEG 304
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 23/233 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+++++ + WNSVIA+ A+ G S EA F M K + I L G
Sbjct: 148 MNESDHYFWNSVIAEYAQNGLSAEAFSVFGDMVK----SGNFRYNAVIMDXGLSGALQLG 203
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K H Q VFV ++++D+Y KC + ARK FD +++N+ SWT+M+ GY
Sbjct: 204 KCIHHQVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFD--CMKVKNVKSWTAMVAGYG 261
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ A+EA+ +F + + V + + SVL+ACS + + EG H
Sbjct: 262 MHGRAKEAMEIFYKMI------------RSGVKPNYITFVSVLAACSHAGM--LKEGXHW 307
Query: 213 F-VIKRGFDSEVGVGNTL--IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
F +K F E G+ + L +D R G++ + + + D + W S++
Sbjct: 308 FNRMKCEFIVEPGIEHYLCMVDLLGRAGYLXCYGLIKEMNAKPDFIIWGSLLG 360
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/648 (52%), Positives = 447/648 (68%), Gaps = 35/648 (5%)
Query: 19 HSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC 78
H++ +L LF + VD + SW++ + DL GD V AL AF++ +++ R P
Sbjct: 35 HTSTPSLRALFLRAVDPSRPASWSAAVGDLLSSGDPVAALAAFAAALRVNPAALRPALPP 94
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFG-FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
A ++ +A L +G+Q H A G F D F +SAL+ MY+ C DARK FDEIP
Sbjct: 95 AFRAAAAATSLAAGRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSP 154
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
N V T+M +GYV+N+ +L LF++ + S VD A SA
Sbjct: 155 --NPVIITAMASGYVRNNLVYPSLALFRKLIASGSATA----------VDEAAALVAFSA 202
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV--SRKVFDGMIEKDAV 255
+R+ G+T H V+K G D + GV NT++DAYA+GG D+ +RKVFD M EKD V
Sbjct: 203 SARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVV 261
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
+WNS+IA+YAQNG++A+AL ++ +M+ S +KCNAVTLSA+LLA AH G ++ GKCIH+
Sbjct: 262 SWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHN 321
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
QV++M LEE+V VGTS++DMY KCG+V++ARKAF ++KEKN+ SW+AMI GYGMH +E
Sbjct: 322 QVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQE 381
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
ALD+F +M ++G PNYITF+SVL+ACSHAGL+ +G +W N M F IEPGVEHYGCMV
Sbjct: 382 ALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMV 441
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCG 494
DLLGRAG L EAY LI+ MKVK D +WG+LL ACRIHKNV+L EI+AK+LFEL+ NCG
Sbjct: 442 DLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFELDATNCG 501
Query: 495 YHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEK 554
Y+VLLSNIYA AG W+DVER R L+K R + K PG+S VEL+G+ H F VGDK HPQH++
Sbjct: 502 YYVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKE 561
Query: 555 IYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------------- 599
IY YL +L K+QE GYV + SV+HD+D+EEK L IHSEKLA
Sbjct: 562 IYSYLGKLLEKMQEAGYVPNTGSVLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIH 621
Query: 600 ---NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT I+LI+K+ REI+VRD +RFH+FKDG CSCGDYW
Sbjct: 622 VIKNLRVCTDCHTAIKLITKIAQREIIVRDLQRFHHFKDGSCSCGDYW 669
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/554 (58%), Positives = 407/554 (73%), Gaps = 61/554 (11%)
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+ SW S++ ++ ++ EAL F +S ++ + + +CS
Sbjct: 40 NVFSWNSVIAELARSGDSVEALRAF------------SSMRKLSLKPNRSTFPCAIKSCS 87
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR---------------- 243
+ AH + GF+ ++ V + L+D Y++ G + +R
Sbjct: 88 ALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTS 147
Query: 244 ---------------KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
+VFDGM E+D ++WNSIIA+YAQNG++ E++++F +MVK ++
Sbjct: 148 MITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINY 207
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
NAVTLSAVLLA AH G RLGKCIHDQVIKM LE +V VGTSIIDMYCKCG+V++ARKAF
Sbjct: 208 NAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAF 267
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
++M+EKNV+SW+AM+AGYGMH A+EAL++FY+M AGV+PNYITFVSVL+ACSHAGL++
Sbjct: 268 DRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLE 327
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
EGWHW M HEF++EPGVEHYGCMVDLLGRAG LKEA+DLI+GMK++ DFVVWG+LLGA
Sbjct: 328 EGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGA 387
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
CR+HKNVDLGEI+A+KLFEL+P NCGY+VLLSNIYA+AGRWEDVER R LMKN L K P
Sbjct: 388 CRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPP 447
Query: 529 GFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKE 588
GFSLV+++G+VH FLVGD+EHPQHEKIYEYLE+L++KLQEVGYV DMTSV+HDV EEKE
Sbjct: 448 GFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKE 507
Query: 589 MTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRF 630
M LR+HSEKLA NLRVCGDCHT I+ ISK+VDREIVVRDSKRF
Sbjct: 508 MVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRF 567
Query: 631 HYFKDGLCSCGDYW 644
H+F+DGLCSCGDYW
Sbjct: 568 HHFRDGLCSCGDYW 581
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/406 (47%), Positives = 251/406 (61%), Gaps = 38/406 (9%)
Query: 1 MKLSKSSSVSSVVS---NVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEA 57
MK+S S+SV S ++S N NLTTLFNKYVDK NVFSWNSVIA+LAR GDSVEA
Sbjct: 1 MKISNSTSVVITFSWKIYRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEA 60
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM 117
LRAFSSMRKLSL P RSTFPCAIKSCSAL DLHSG+QAHQQA IFGF D+FVSSAL+DM
Sbjct: 61 LRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDM 120
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF---------- 167
YSKCGEL DAR LFDEI RNIVSWTSM+TGYVQND+A AL +F
Sbjct: 121 YSKCGELRDARTLFDEISH--RNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNS 178
Query: 168 LLEESECGGASENSDNVF----------VDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
++ G S S +F ++V +++VL AC+ + + H VIK
Sbjct: 179 IIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKM 238
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
G +S V VG ++ID Y + G V+++RK FD M EK+ +W++++A Y +G A EAL+VF
Sbjct: 239 GLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVF 298
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMYC 336
+M VK N +T +VL A +H G+L G + D+E V ++D+
Sbjct: 299 YEM-NMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLG 357
Query: 337 KCGQVDLARKAFNQMKEKNVRS----WTAMIAGYGMHCRAREALDL 378
+ G + ++AF+ +K +R W A++ CR + +DL
Sbjct: 358 RAGYL---KEAFDLIKGMKLRPDFVVWGALLGA----CRMHKNVDL 396
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 67/291 (23%)
Query: 245 VFDGMIEKDAV-TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+F+ ++K V +WNS+IA A++G + EAL F M K + +K N T + + + L
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLS-LKPNRSTFPCAIKSCSAL 89
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L G+ H Q + E + V ++++DMY KCG++ AR F+++ +N+ SWT+MI
Sbjct: 90 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 149
Query: 364 AGY--------------GMHCR-----------------AREALDLFYKMIKAG-VRPNY 391
GY GM R + E++++F++M+K G + N
Sbjct: 150 TGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNA 209
Query: 392 ITFVSVLSACSHAGLVQEG---WHWLNTMGHEFNI------------------------- 423
+T +VL AC+H+G + G + MG E N+
Sbjct: 210 VTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDR 269
Query: 424 --EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK---VKADFVVWGSLLGAC 469
E V+ + MV G G KEA ++ M VK +++ + S+L AC
Sbjct: 270 MREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAAC 320
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/647 (51%), Positives = 446/647 (68%), Gaps = 35/647 (5%)
Query: 20 STNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCA 79
+T ++L LF + VD + SW++ +ADL GD+V AL F++ + + R P A
Sbjct: 40 TTASSLRALFLRAVDPSRPASWSAAVADLLSSGDAVAALATFAAAVRANPAALRPALPPA 99
Query: 80 IKSCSALHDLHSGKQAHQQAFIFG-FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
+++ +A L +G+Q H A G F D + +SAL+ MY C DAR+ FDEIP
Sbjct: 100 LRAAAAARSLAAGRQLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDP- 158
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
N V T+M +GYV+N+ +L LF+ + +S VD A SA
Sbjct: 159 -NPVIVTAMASGYVRNNLVYHSLELFRAMIASDSAS----------VVDEAAALVAFSAS 207
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD--VSRKVFDGMIEKDAVT 256
+RV GVT H + K GF+ GV NT++D+YA+GG D V+RKVFD M E+D V+
Sbjct: 208 ARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVS 266
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
WNS+IA+YAQNG++AEA+ ++ +M+ +KCNAV LSAVLLA AH G ++ GK IH+Q
Sbjct: 267 WNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQ 326
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
V++M LEE+V VGTSI+DMY KCG+V++A +AF ++KEKN+ SW+AMI GYGMH R +EA
Sbjct: 327 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEA 386
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
L++F +M ++G+RPNYITF+SVL+ACSHAGL+ EG +W N M EF IE GVEHYGCMVD
Sbjct: 387 LEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVD 446
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY 495
LLGRAG L EAY LI+ MKVK D +WG+LL ACRIHKNV+L E++ K+LFEL+ +N GY
Sbjct: 447 LLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGY 506
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
+VLLSNIYA A W+DVER R L+K RR+ K PG+S EL+GK++ F VGDK HPQH +I
Sbjct: 507 YVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEI 566
Query: 556 YEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------- 599
Y YLE+L ++QE GYV + SV+HD+D+EEKE LRIHSEKLA
Sbjct: 567 YSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHI 626
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT ++ I+K+ +REI++RD +RFH+FKDGLCSC DYW
Sbjct: 627 IKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 673
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 331/649 (51%), Positives = 442/649 (68%), Gaps = 35/649 (5%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP 77
+ + +L LF + VD + SW++ +ADL GD V AL F++ + + R P
Sbjct: 33 RDAPTPSLRALFLRAVDPSRPSSWSTAVADLLSSGDPVAALAVFAAALRANPAALRPALP 92
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFG-FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
A+++ +A L +G+Q H A G F D + +SAL+ MY C DAR+ FDEIP
Sbjct: 93 PALRAAAAATSLSAGRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPT 152
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
N V T+M +G ++N+ L +F+ + S VD A LS
Sbjct: 153 P--NPVIVTAMASGCMRNNLVYTTLSIFRSMVASGSAG----------VVDEAAALVALS 200
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV--SRKVFDGMIEKDA 254
A +RV G+T G H V K G D + GV NT+IDAYA+GG D+ +RK+FD M+++D
Sbjct: 201 ASARVPDRGITGGIHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFD-MMDRDV 259
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQM-VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V+WN++IA+YAQNGL+ EAL ++ +M + DV+CNAVTLSAVLLA AH G ++ GK IH
Sbjct: 260 VSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIH 319
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+QV++M LE++V VGTS++DMY KCG+V++A KAF ++K KN+ SW+AMIAGYGMH +
Sbjct: 320 NQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQ 379
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
EAL +F M K+G++PNYITF++VL+ACSHAGL+ EG +W NTM EF IEPGVEHYGCM
Sbjct: 380 EALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCM 439
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
VDLLGRAG L EAY LI+ MKVK D +WG+LL ACRI+KNV+L +I A++LFEL+ N
Sbjct: 440 VDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLSACRIYKNVELAKICAERLFELDATNS 499
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
GY+VLLSNIYA AG W++VER R L+K R + K PG+S VEL+GK H F VGDK HPQ++
Sbjct: 500 GYYVLLSNIYAEAGMWKEVERMRVLVKTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYK 559
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------- 599
+IY YLE+L ++ + GYV + SV+HD+D EE+E LRIHSEKLA
Sbjct: 560 EIYAYLEKLLERIHDAGYVPNTGSVLHDLDVEERESMLRIHSEKLAVAFALMNSVQGSVI 619
Query: 600 ----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH I++I+K+ REI++RD KRFH+FKDGLCSCGDYW
Sbjct: 620 HVIKNLRVCTDCHAAIKIITKLTGREIIIRDLKRFHHFKDGLCSCGDYW 668
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 301/540 (55%), Positives = 390/540 (72%), Gaps = 34/540 (6%)
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
DAR+ FDEIP N V T+M +GYV+N+ +L LF+ + +S
Sbjct: 2 DARRAFDEIPDP--NPVIVTAMASGYVRNNLVYHSLELFRAMIASDSAS----------V 49
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD--VSR 243
VD A SA +RV GVT H + K GF+ GV NT++D+YA+GG D V+R
Sbjct: 50 VDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVAR 109
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK-STDVKCNAVTLSAVLLAIAH 302
KVFD M E+D V+WNS+IA+YAQNG++AEA+ ++ +M+ +KCNAV LSAVLLA AH
Sbjct: 110 KVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAH 168
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
G ++ GK IH+QV++M LEE+V VGTSI+DMY KCG+V++A +AF ++KEKN+ SW+AM
Sbjct: 169 AGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAM 228
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
I GYGMH R +EAL++F +M ++G+RPNYITF+SVL+ACSHAGL+ EG +W N M EF
Sbjct: 229 ITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFG 288
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
IE GVEHYGCMVDLLGRAG L EAY LI+ MKVK D +WG+LL ACRIHKNV+L E++
Sbjct: 289 IEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSV 348
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
K+LFEL+ +N GY+VLLSNIYA AG W+DVER R L+K RR+ K PG+S EL+GK++ F
Sbjct: 349 KRLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLF 408
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
VGDK HPQH +IY YLE+L ++QE GYV + SV+HD+D+EEKE LRIHSEKLA
Sbjct: 409 YVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAF 468
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT ++ I+K+ +REI++RD +RFH+FKDGLCSC DYW
Sbjct: 469 ALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 182/354 (51%), Gaps = 42/354 (11%)
Query: 25 LTTLFNKYVDKNNVFS----WNSVIA-DLARGGDSVEALRAFSSMRKLSLTPTRSTFPCA 79
+T + + YV N V+ + ++IA D A D AL AFS+ ++ P R
Sbjct: 18 VTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARV---PDRGV---- 70
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG--ELSDARKLFDEIPQR 137
++LH L + GF R+ V + ++D Y+K G +L ARK+FD +
Sbjct: 71 ---TASLHALIAK---------IGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-- 116
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
R++VSW SM+ Y QN + EA+ L+ + L GG + ++VA+++VL A
Sbjct: 117 -RDVVSWNSMIALYAQNGMSAEAIGLYSKML----NVGGG------IKCNAVALSAVLLA 165
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C+ + H V++ G + V VG +++D Y++ G V+++ + F + EK+ ++W
Sbjct: 166 CAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSW 225
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
+++I Y +G EAL++F +M K + ++ N +T +VL A +H G+L G+ ++ +
Sbjct: 226 SAMITGYGMHGRGQEALEIFTEM-KRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMK 284
Query: 318 K-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMH 369
+ +E V ++D+ + G +D A +MK K + W A+++ +H
Sbjct: 285 QEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIH 338
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M L ++ V + + ++ + + + + + N+ SW+++I G EAL
Sbjct: 185 MGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEI 244
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK---QAHQQAFIFGFHRDVFVSSALIDM 117
F+ M++ L P TF + +CS L G+ A +Q FG V ++D+
Sbjct: 245 FTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQE--FGIEAGVEHYGCMVDL 302
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE-FLLEESECG 175
+ G L +A L E+ + + W ++L+ + N A + K F L+ S G
Sbjct: 303 LGRAGCLDEAYSLIKEMKVKPDAAI-WGALLSACRIHKNVELAEMSVKRLFELDASNSG 360
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 288/516 (55%), Positives = 374/516 (72%), Gaps = 32/516 (6%)
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
GYV+N+ +L LF+ + +S VD A SA +RV GVT
Sbjct: 170 GYVRNNLVYHSLELFRAMIASDSAS----------VVDEAAALVAFSASARVPDRGVTAS 219
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVD--VSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H + K GF+ GV NT++D+YA+GG D V+RKVFD M E+D V+WNS+IA+YAQN
Sbjct: 220 LHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQN 278
Query: 268 GLAAEALDVFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
G++AEA+ ++ +M+ +KCNAV LSAVLLA AH G ++ GK IH+QV++M LEE+V
Sbjct: 279 GMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVY 338
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
VGTSI+DMY KCG+V++A +AF ++KEKN+ SW+AMI GYGMH R +EAL++F +M ++G
Sbjct: 339 VGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSG 398
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+RPNYITF+SVL+ACSHAGL+ EG +W N M EF IE GVEHYGCMVDLLGRAG L EA
Sbjct: 399 LRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEA 458
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
Y LI+ MKVK D +WG+LL ACRIHKNV+L E++ K+LFEL+ +N GY+VLLSNIYA A
Sbjct: 459 YSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEA 518
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
W+DVER R L+K RR+ K PG+S EL+GK++ F VGDK HPQH +IY YLE+L ++
Sbjct: 519 RMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERM 578
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
QE GYV + SV+HD+D+EEKE LRIHSEKLA NLRVC DCH
Sbjct: 579 QEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCH 638
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
T ++ I+K+ +REI++RD +RFH+FKDGLCSC DYW
Sbjct: 639 TAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 674
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 153/284 (53%), Gaps = 20/284 (7%)
Query: 92 GKQAHQQAFI--FGFHRDVFVSSALIDMYSKCG--ELSDARKLFDEIPQRIRNIVSWTSM 147
G A A I GF R+ V + ++D Y+K G +L ARK+FD + R++VSW SM
Sbjct: 215 GVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME---RDVVSWNSM 271
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y QN + EA+ L+ + L GG + ++VA+++VL AC+
Sbjct: 272 IALYAQNGMSAEAIGLYSKML----NVGG------GIKCNAVALSAVLLACAHAGAIQTG 321
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H V++ G + V VG +++D Y++ G V+++ + F + EK+ ++W+++I Y +
Sbjct: 322 KRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMH 381
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVI 326
G EAL++F +M K + ++ N +T +VL A +H G+L G+ ++ + + +E V
Sbjct: 382 GRGQEALEIFTEM-KRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVE 440
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMH 369
++D+ + G +D A +MK K + W A+++ +H
Sbjct: 441 HYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIH 484
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 120/234 (51%), Gaps = 22/234 (9%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS--LTPTRSTFPCAIKSCSALHDLHSG 92
+ +V SWNS+IA A+ G S EA+ +S M + + + +C+ + +G
Sbjct: 262 ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTG 321
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H Q G +V+V ++++DMYSKCG + A + F +I + +NI+SW++M+TGY
Sbjct: 322 KRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKE--KNILSWSAMITGYG 379
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ +EAL +F E + + + SVL+ACS + + EG +
Sbjct: 380 MHGRGQEALEIFTEM------------KRSGLRPNYITFISVLAACSHAGL--LDEGRYW 425
Query: 213 F-VIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
+ +K+ F E GV + ++D R G +D + + M ++ DA W ++++
Sbjct: 426 YNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLS 479
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 7/149 (4%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ + + N+ SW+++I G EAL F+ M++ L P TF + +CS L
Sbjct: 361 RKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLD 420
Query: 91 SGK---QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ A +Q FG V ++D+ + G L +A L E+ + + W ++
Sbjct: 421 EGRYWYNAMKQE--FGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAI-WGAL 477
Query: 148 LTGYVQNDNAREALLLFKE-FLLEESECG 175
L+ + N A + K F L+ S G
Sbjct: 478 LSACRIHKNVELAEMSVKRLFELDASNSG 506
>gi|255543589|ref|XP_002512857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547868|gb|EEF49360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 454
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 270/392 (68%), Positives = 330/392 (84%), Gaps = 5/392 (1%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
NL T FNKY +K NVFSWNS+IADLAR GDS+E+LRAF SMRKL+L P RSTFPCAIK+C
Sbjct: 33 NLRTWFNKYFEKTNVFSWNSLIADLARSGDSIESLRAFYSMRKLNLKPNRSTFPCAIKAC 92
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
S+L DLH GKQ HQQA +FGF D+FVSSAL+DMYSKCG LSDAR LFDEI R NIV
Sbjct: 93 SSLLDLHWGKQTHQQALVFGFESDLFVSSALVDMYSKCGRLSDARILFDEITHR--NIVI 150
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
WTSM+TGY+QND+A EALLLFK+FL+EESE +E D V +DSVA+ SVLSACSR++
Sbjct: 151 WTSMITGYIQNDHAHEALLLFKQFLIEESE---RNEEKDEVLMDSVAMVSVLSACSRISG 207
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
G+T+G HGFV+K+G D +VG+ NTL+DAYA+ G V VSR+VFD ++EKDA++WNS+IA+
Sbjct: 208 KGMTKGVHGFVVKKGLDEDVGIENTLLDAYAKCGEVGVSRQVFDEIVEKDAISWNSMIAV 267
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YAQNGL++EA +VF M+K VK NAVTLS +LLA AH G L+ GKCIHDQVI+M L++
Sbjct: 268 YAQNGLSSEAFEVFHGMIKYGYVKYNAVTLSTLLLACAHSGALQTGKCIHDQVIRMGLDD 327
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+VIVGTS+IDMYCKCG+V +ARK F+ MKEKNV+SWTAM+AGYGMH AREAL++FYKMI
Sbjct: 328 NVIVGTSLIDMYCKCGRVQMARKTFDGMKEKNVKSWTAMVAGYGMHGCAREALNIFYKMI 387
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
++GV+PNYITFVSVL+ACSHAGL+ EG+ L+
Sbjct: 388 RSGVKPNYITFVSVLAACSHAGLLDEGYFQLD 419
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 276/653 (42%), Positives = 399/653 (61%), Gaps = 34/653 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+++ S K + N +F++ + K +V SWN++IA ++ G EAL FS M+ +
Sbjct: 159 TALASMYTKCGSLENARQVFDR-MPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGI 217
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P ST + C+ L L GKQ H A G DV V + L++MY+KCG ++ A K
Sbjct: 218 KPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHK 277
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
LF+ +P IR++ SW +++ GY N EAL F + + +S+
Sbjct: 278 LFERMP--IRDVASWNAIIGGYSLNSQHHEALAFFNRMQVR------------GIKPNSI 323
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
+ SVL AC+ + + HG+ I+ GF+S VGN L++ YA+ G+V+ + K+F+ M
Sbjct: 324 TMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERM 383
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+K+ V WN+II+ Y+Q+G EAL +F +M ++ +K ++ + +VL A AH L G
Sbjct: 384 PKKNVVAWNAIISGYSQHGHPHEALALFIEM-QAQGIKPDSFAIVSVLPACAHFLALEQG 442
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K IH I+ E +V+VGT ++D+Y KCG V+ A+K F +M E++V SWT MI YG+H
Sbjct: 443 KQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIH 502
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
+AL LF KM + G + ++I F ++L+ACSHAGLV +G + M ++ + P +EH
Sbjct: 503 GHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEH 562
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
Y C+VDLLGRAG L EA +I+ M ++ D VWG+LLGACRIH N++LGE AAK LFEL+
Sbjct: 563 YACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELD 622
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
P+N GY+VLLSNIYA A RWEDV + R +MK + + K PG S+V + V FLVGD+ H
Sbjct: 623 PDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTH 682
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
PQ E+IY LE L ++++ GYV + + DV++E KE L HSEKLA
Sbjct: 683 PQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSP 742
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + ISK+V REI+VRD+ RFH+ K+G CSCGDYW
Sbjct: 743 GIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 242/450 (53%), Gaps = 25/450 (5%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
T F + +NN W I + G +ALR + M++ + P + F IK+C +
Sbjct: 74 TQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQ 133
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
DL +G++ H+ GF DV V +AL MY+KCG L +AR++FD +P+ R++VSW +
Sbjct: 134 SDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPK--RDVVSWNA 191
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ GY QN EAL LF E + G NS + SV+ C+ +
Sbjct: 192 IIAGYSQNGQPYEALALFSEM-----QVNGIKPNSS-------TLVSVMPVCAHLLALEQ 239
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H + I+ G +S+V V N L++ YA+ G+V+ + K+F+ M +D +WN+II Y+
Sbjct: 240 GKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSL 299
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
N EAL F++M + +K N++T+ +VL A AHL L G+ IH I+ E + +
Sbjct: 300 NSQHHEALAFFNRM-QVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDV 358
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
VG ++++MY KCG V+ A K F +M +KNV +W A+I+GY H EAL LF +M G
Sbjct: 359 VGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQG 418
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGK 442
++P+ VSVL AC+H +++G H + I G E +VD+ + G
Sbjct: 419 IKPDSFAIVSVLPACAHFLALEQG-----KQIHGYTIRSGFESNVVVGTGLVDIYAKCGN 473
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ A L E M + D V W +++ A IH
Sbjct: 474 VNTAQKLFERMP-EQDVVSWTTMILAYGIH 502
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 20/258 (7%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
V + + N+ N N + + K NV +WN++I+ ++ G EAL F M+
Sbjct: 359 VGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQG 418
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
+ P + +C+ L GKQ H GF +V V + L+D+Y+KCG ++ A+
Sbjct: 419 IKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQ 478
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
KLF+ +P+ +++VSWT+M+ Y + + +AL LF + E G +D
Sbjct: 479 KLFERMPE--QDVVSWTTMILAYGIHGHGEDALALFSKM----QETGTK--------LDH 524
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+A ++L+ACS + V +G F + G ++ L+D R GH+D + +
Sbjct: 525 IAFTAILTACSHAGL--VDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGI 582
Query: 246 FDGM-IEKDAVTWNSIIA 262
M +E DA W +++
Sbjct: 583 IKNMSLEPDANVWGALLG 600
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 272/635 (42%), Positives = 408/635 (64%), Gaps = 35/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+++ + + VF WN++I + +A+ +S M+ + P T PC +K+CS +
Sbjct: 125 VFDEFPEPS-VFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVP 183
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK+ H Q F GF DVFV + L+ +Y+KCG + AR +F+ + R NIVSWTSM
Sbjct: 184 VLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDR--NIVSWTSM 241
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY QN EAL +F + NV D +A+ SVL A + V
Sbjct: 242 ISGYGQNGLPMEALRIFGQM------------RQRNVKPDWIALVSVLRAYTDVEDLEQG 289
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG V+K G + E + +L YA+ G V V+R FD M + + WN++I+ YA+N
Sbjct: 290 KSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKN 349
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EA+ +F +M+ S +++ +++T+ + +LA A +G L L K + D + K + V V
Sbjct: 350 GYTNEAVGLFQEMI-SKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFV 408
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
T++IDM+ KCG VDLAR+ F++ +K+V W+AMI GYG+H R ++A+DLFY M +AGV
Sbjct: 409 NTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGV 468
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
PN +TFV +L+AC+H+GLV+EGW ++M + + IE +HY C+VDLLGR+G L EAY
Sbjct: 469 CPNDVTFVGLLTACNHSGLVEEGWELFHSMKY-YGIEARHQHYACVVDLLGRSGHLNEAY 527
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
D I M ++ VWG+LLGAC+I+++V LGE AA++LF L+P N G++V LSN+YA++
Sbjct: 528 DFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSR 587
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
W+ V + R LM+ + L+K G+SL+E+ GK+ AF VGDK HP+ ++I+E LE L +L+
Sbjct: 588 LWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLK 647
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E G++ + SV+HD++QEEKE TL HSE+LA NLR C +CH+
Sbjct: 648 EAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHS 707
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LISK+V+REIVVRD+ RFH+FK+G+CSC DYW
Sbjct: 708 ATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 196/379 (51%), Gaps = 17/379 (4%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H Q + G F+ + ++ GE+ ARK+FDE P+ ++ W +++ GY
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPE--PSVFLWNAIIRGYSS 146
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
++ +A+ ++ + V D + VL ACS V V V + HG
Sbjct: 147 HNFFGDAIEMYSRM------------QASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQ 194
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+ + GF+S+V V N L+ YA+ G V+ +R VF+G+ +++ V+W S+I+ Y QNGL EA
Sbjct: 195 IFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEA 254
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L +F QM + +VK + + L +VL A + L GK IH V+KM LE + S+
Sbjct: 255 LRIFGQM-RQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTA 313
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY KCGQV +AR F+QM+ NV W AMI+GY + EA+ LF +MI +R + IT
Sbjct: 314 MYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSIT 373
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
S + AC+ G + W+ ++ V ++D+ + G + A ++ +
Sbjct: 374 VRSAILACAQVGSLDLA-KWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFD-R 431
Query: 454 KVKADFVVWGSLLGACRIH 472
+ D VVW +++ +H
Sbjct: 432 TLDKDVVVWSAMIVGYGLH 450
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 279/667 (41%), Positives = 396/667 (59%), Gaps = 65/667 (9%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+LFN +++ N+F WNS+I L+ AL F M + P TFP +KSC+ L
Sbjct: 84 SLFNS-IEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKL 142
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD-------------------- 126
H GKQ H GF DVF+ ++LI+MY++ GE+++
Sbjct: 143 ASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALI 202
Query: 127 -----------ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG 175
AR+LFDE+P ++++VSW +M+ GY Q ++EALLLF++
Sbjct: 203 AGYALWGYMDRARQLFDEMP--VKDVVSWNAMIAGYAQMGRSKEALLLFEDM-------- 252
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
NV + I SVLSAC++ + ++ RG S + + N LID Y++
Sbjct: 253 ----RKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSK 308
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
G + +R++FD M+E+D ++WN +I Y EAL +F +M+ S V+ +T +
Sbjct: 309 CGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLAS-GVEPTEITFLS 367
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
+L + AHLG + LGK IH + K S + TS+ID+Y KCG + AR+ F+ MK K+
Sbjct: 368 ILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKS 427
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
+ SW AMI G MH +A +A +LF KM G+ PN ITFV +LSAC HAGLV G + +
Sbjct: 428 LASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFS 487
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
+M ++ I P +HYGCM+DLLGRAG +EA L++ M+VK D +WGSLLGACR H V
Sbjct: 488 SMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRV 547
Query: 476 DLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVEL 535
+LGE+ A++LFELEP+N G +VLLSNIYA AG+W+DV R R+ + +R + K PG + +E+
Sbjct: 548 ELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEV 607
Query: 536 RGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHS 595
VH FLVGDK HPQ E IY LEE++ +L+ G+V D + V++D+D+E KE L HS
Sbjct: 608 DNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHS 667
Query: 596 EKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGL 637
EKLA NLRVC +CH+ +LISK+ +REI+ RD RFH+FKDG
Sbjct: 668 EKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGS 727
Query: 638 CSCGDYW 644
CSC DYW
Sbjct: 728 CSCNDYW 734
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 220/462 (47%), Gaps = 62/462 (13%)
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQ 136
++K S + + KQ H G H +F S LI+ S+ G++S A LF+ I +
Sbjct: 32 SLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEE 91
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
N+ W SM+ G + + AL+ F + E +S +L
Sbjct: 92 --PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVE------------PNSYTFPFLLK 137
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG-------------------- 236
+C+++ + H V+K GF S+V + +LI+ YA+
Sbjct: 138 SCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAIS 197
Query: 237 -----------GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD 285
G++D +R++FD M KD V+WN++IA YAQ G + EAL +F+ M K+ +
Sbjct: 198 FTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKA-N 256
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
V N T+ +VL A A L LG + + L ++ + ++IDMY KCG + AR
Sbjct: 257 VPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTAR 316
Query: 346 KAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
+ F+ M E++V SW MI GY C +EAL LF +M+ +GV P ITF+S+L +C+H G
Sbjct: 317 ELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLG 376
Query: 406 LVQEGWHWLNT-MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGS 464
+ G W++ + FN ++DL + G + A + +GMK+K+ W +
Sbjct: 377 AIDLG-KWIHAYINKNFNSV-STSLSTSLIDLYAKCGNIVAARQVFDGMKIKS-LASWNA 433
Query: 465 LLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLS 500
++ +H D A +LF +EPN + +LS
Sbjct: 434 MICGLAMHGQAD----KAFELFSKMSSDGIEPNEITFVGILS 471
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/630 (42%), Positives = 390/630 (61%), Gaps = 34/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V NV SW ++IA A+ G EA F+ M + + P R TF + +CS+ L G
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG 432
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q G+ D V +AL+ MY+KCG L DA ++F++I ++ N+V+W +M+T YV
Sbjct: 433 QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQ--NVVAWNAMITAYV 490
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q++ AL F+ L E G NS S+L+ C + + H
Sbjct: 491 QHEQYDNALATFQALLKE-----GIKPNSST-------FTSILNVCKSSDSLELGKWVHF 538
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++K G +S++ V N L+ + G + ++ +F+ M ++D V+WN+IIA + Q+G
Sbjct: 539 LIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQV 598
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A D F +M++ + +K + +T + +L A A L G+ +H + + + V+VGT +I
Sbjct: 599 AFDYF-KMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLI 657
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
MY KCG ++ A + F+++ +KNV SWT+MIAGY H R +EAL+LFY+M + GV+P++I
Sbjct: 658 SMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWI 717
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TFV LSAC+HAGL++EG H +M EFNIEP +EHYGCMVDL GRAG L EA + I
Sbjct: 718 TFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIK 776
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M+V+ D VWG+LLGAC++H NV+L E AA+K EL+PN+ G V+LSNIYA AG W++V
Sbjct: 777 MQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEV 836
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+ R +M +R + K PG S +E+ GKVH F DK HPQ E+I+ LE L+++++++GYV
Sbjct: 837 AKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYV 896
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D V+HDV+ EKE L HSE+LA NLRVCGDCHT + I
Sbjct: 897 PDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFI 956
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+ R+I+ RDS RFH+FKDG+CSCGD+W
Sbjct: 957 SKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 248/478 (51%), Gaps = 33/478 (6%)
Query: 32 YVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS 91
+ D + N+V+ L++ G EA++ + + R T+ ++ C +L
Sbjct: 69 FADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGD 128
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G++ + G D+F+ + LI+MY+KCG A+++FD++ R +++ SW +L GY
Sbjct: 129 GERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM--REKDVYSWNLLLGGY 186
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
VQ+ EA L ++ + D+V D S+L+AC+ +
Sbjct: 187 VQHGLYEEAFKLHEQMV------------QDSVKPDKRTFVSMLNACADARNVDKGRELY 234
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
++K G+D+++ VG LI+ + + G + + KVFD + +D VTW S+I A++G
Sbjct: 235 NLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFK 294
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+A ++F +M + V+ + V ++L A H L GK +H ++ ++ + + VGT+I
Sbjct: 295 QACNLFQRM-EEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAI 353
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ MY KCG ++ A + F+ +K +NV SWTAMIAG+ H R EA F KMI++G+ PN
Sbjct: 354 LSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNR 413
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG-------CMVDLLGRAGKLK 444
+TF+S+L ACS ++ G + + IE G YG ++ + + G LK
Sbjct: 414 VTFMSILGACSSPSALKRGQQIQDHI-----IEAG---YGSDDRVRTALLSMYAKCGSLK 465
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--LEPNNCGYHVLLS 500
+A+ + E + K + V W +++ A H+ D + L + ++PN+ + +L+
Sbjct: 466 DAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 271/635 (42%), Positives = 395/635 (62%), Gaps = 35/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +++ V SWN++IA ++ G + +AL M+ P T + + + +
Sbjct: 204 MFDRMPERDLV-SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H A GF + V +S+AL DMYSKCG + AR +FD + Q+ +VSW SM
Sbjct: 263 LLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQK--TVVSWNSM 320
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GYVQN +A+ +F++ L E + G V I L AC+ +
Sbjct: 321 MDGYVQNGEPEKAIAVFEKMLEEGIDPTG------------VTIMEALHACADLGDLERG 368
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H FV + S++ V N+LI Y++ VD++ +F+ + + V+WN++I YAQN
Sbjct: 369 KFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQN 428
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G +EAL+ F +M KS +K ++ T+ +V+ A+A L V R K IH +I+ L++++ V
Sbjct: 429 GRVSEALNCFSEM-KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFV 487
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
T+++DMY KCG + +ARK F+ + +++V +W AMI GYG H R ALDLF KM K V
Sbjct: 488 TTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAV 547
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
PN IT++SV+SACSH+GLV EG +M ++ +EP ++HYG MVDLLGRAG++KEA+
Sbjct: 548 EPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAW 607
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
D IE M + V+G++LGAC+IHKN+++GE AAKKLFEL P+ GYHVLL+NIYA+
Sbjct: 608 DFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTS 667
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+W V R M+ + L KTPG S+VELR +VH+F G HPQ ++IY +LEEL +++
Sbjct: 668 KWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIK 727
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV D T++I DV+ + +E L HSEKLA NLRVCGDCH
Sbjct: 728 AAGYVPD-TNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHN 786
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ IS V REI+VRD +RFH+FK+G+CSCGDYW
Sbjct: 787 ATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/502 (30%), Positives = 252/502 (50%), Gaps = 39/502 (7%)
Query: 17 DKHSTNTNLTTLFNKYVDKNN---VFS---------WNSVIADLARGGDSVEALRAFSSM 64
++H T L +LF+KY N VF +++++ A+ AL M
Sbjct: 79 NEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRM 138
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
R + P F +K C DL GK+ H Q F +VF + +++MY+KC ++
Sbjct: 139 RYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQI 198
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
DA K+FD +P+ R++VSW +++ G+ QN A++AL E +L + G
Sbjct: 199 DDAYKMFDRMPE--RDLVSWNTIIAGFSQNGFAKKAL----ELVLRMQDEGQRP------ 246
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
DS+ + +VL A + V + V + HG+ I+ GF V + L D Y++ G V+ +R
Sbjct: 247 --DSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARL 304
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
+FDGM +K V+WNS++ Y QNG +A+ VF++M++ + VT+ L A A LG
Sbjct: 305 IFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEE-GIDPTGVTIMEALHACADLG 363
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L GK +H V +++L + V S+I MY KC +VD+A FN + + SW AMI
Sbjct: 364 DLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMIL 423
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
GY + R EAL+ F +M G++P+ T VSV+ A + + + W++ + ++
Sbjct: 424 GYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA-KWIHGLIIRSCLD 482
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
+ +VD+ + G + A L + M + W +++ H LG AA
Sbjct: 483 KNIFVTTALVDMYSKCGAIHMARKLFD-MISDRHVITWNAMIDGYGTH---GLGR-AALD 537
Query: 485 LFE------LEPNNCGYHVLLS 500
LF+ +EPN+ Y ++S
Sbjct: 538 LFDKMKKGAVEPNDITYLSVIS 559
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 183/370 (49%), Gaps = 19/370 (5%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
+K ++S+ ++++ + L +D+ V SWNS++ + G+ +A+ F
Sbjct: 279 FAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFE 338
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
M + + PT T A+ +C+ L DL GK H+ D+ V ++LI MYSKC
Sbjct: 339 KMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCK 398
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+ A +F+ + R VSW +M+ GY QN EAL F E S
Sbjct: 399 RVDIASDIFNNLNGRTH--VSWNAMILGYAQNGRVSEALNCFSEM------------KSL 444
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
+ DS + SV+ A + ++V + HG +I+ D + V L+D Y++ G + ++
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
RK+FD + ++ +TWN++I Y +GL ALD+FD+M K V+ N +T +V+ A +H
Sbjct: 505 RKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGA-VEPNDITYLSVISACSH 563
Query: 303 LGVLRLGKCIHDQVIKMD--LEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSW 359
G++ G H + +K D LE S+ +++D+ + G++ A M + +
Sbjct: 564 SGLVDEG-LRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVY 622
Query: 360 TAMIAGYGMH 369
AM+ +H
Sbjct: 623 GAMLGACKIH 632
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 130/258 (50%), Gaps = 11/258 (4%)
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
VIK G +E L+ +++ G ++ + +VF+ + +K +++++ YA+N
Sbjct: 71 LVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLET 130
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL +M + DVK + +L L+ GK IH Q+I +V T ++
Sbjct: 131 ALAFLCRM-RYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVV 189
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+MY KC Q+D A K F++M E+++ SW +IAG+ + A++AL+L +M G RP+ I
Sbjct: 190 NMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSI 249
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRAGKLKEAYD 448
T V+VL A + GL+ G H + I G V + D+ + G ++ A
Sbjct: 250 TLVTVLPAAADVGLLMVGKSI-----HGYAIRAGFAKLVNISTALADMYSKCGSVETARL 304
Query: 449 LIEGMKVKADFVVWGSLL 466
+ +GM K V W S++
Sbjct: 305 IFDGMDQKT-VVSWNSMM 321
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/635 (41%), Positives = 402/635 (63%), Gaps = 35/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K+ D + VF WN+++ +R G A+ ++ M+ ++P +FPC +K+CSAL
Sbjct: 129 LFDKFPDPD-VFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALP 187
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G++ H Q F GF DVFV + L+ +Y+KCGE+ A +F + R IVSWTS+
Sbjct: 188 ALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDR--TIVSWTSI 245
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY QN EAL +F E NV D +A+ SVL A + V
Sbjct: 246 ISGYAQNGQPIEALRIFSEM------------RKTNVRPDWIALVSVLRAYTDVEDLEHG 293
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG VIK G + E + +L YA+ GHV V+R F+ + + WN++I+ Y +N
Sbjct: 294 KSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKN 353
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A EA+++F +++KS +++ +++T+++ + A A +G L L + + + + + VIV
Sbjct: 354 GYAEEAIELF-RLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIV 412
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
TS+ID Y KCG VD+AR F+++ +K+V W+AM+ GYG+H + RE++ LF+ M +AGV
Sbjct: 413 NTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGV 472
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
PN +TFV +L+AC ++GLV+EGW + M ++ IEP +HY C+VDLLGRAG L AY
Sbjct: 473 SPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRAGHLDRAY 531
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ + M ++ VWG+LL AC+IH++V LGE AA++LF L+P N G++V LSN+YA++
Sbjct: 532 NFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSC 591
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
W+ V + R LM+ + L K G+S++E+ GK+ AF GDK HP+ ++I+E +E+L +L+
Sbjct: 592 LWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLK 651
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E G+V SV+HD++ EE E TL HSE+LA NLR C +CH
Sbjct: 652 EAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHA 711
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+LISK+V REIVVRD+ RFH+FKDG CSCGDYW
Sbjct: 712 AIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 196/388 (50%), Gaps = 18/388 (4%)
Query: 85 ALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
++H H Q + + + G F+ + L++ S GE+S ARKLFD+ P ++ W
Sbjct: 85 SIHKTHL-NQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPD--PDVFLW 141
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
+++ Y ++ A+ ++ + C V D + VL ACS +
Sbjct: 142 NAIVRCYSRHGFFGHAIEMYARM---QVAC---------VSPDGFSFPCVLKACSALPAL 189
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
+ HG + + GF+S+V V N L+ YA+ G + + VF ++++ V+W SII+ Y
Sbjct: 190 EMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGY 249
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
AQNG EAL +F +M K T+V+ + + L +VL A + L GK IH VIKM LE
Sbjct: 250 AQNGQPIEALRIFSEMRK-TNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECE 308
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+ S+ +Y KCG V +AR FNQ++ ++ W AMI+GY + A EA++LF M
Sbjct: 309 FDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKS 368
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
+RP+ IT S ++AC+ G ++ W++ V ++D + G +
Sbjct: 369 KNIRPDSITVTSSIAACAQIGSLELA-RWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVD 427
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIH 472
A + + + K D VVW +++ +H
Sbjct: 428 MARFVFDRIPDK-DVVVWSAMMVGYGLH 454
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 125/245 (51%), Gaps = 18/245 (7%)
Query: 160 ALLLFKEFLLEESECGGASENSDNVFV----DSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+L L F + +C ++ D + DS+ + +++ V G+ G GF+I
Sbjct: 53 SLNLTTHFNNNKDDCNESTFKPDKFYASLIDDSIHKTHLNQIYAKLLVTGLQYG--GFLI 110
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+ L++ + G V +RK+FD + D WN+I+ Y+++G A++
Sbjct: 111 AK-----------LVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIE 159
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
++ +M + V + + VL A + L L +G+ +H Q+ + E V V ++ +Y
Sbjct: 160 MYARM-QVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALY 218
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG++ A F ++ ++ + SWT++I+GY + + EAL +F +M K VRP++I V
Sbjct: 219 AKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALV 278
Query: 396 SVLSA 400
SVL A
Sbjct: 279 SVLRA 283
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 273/642 (42%), Positives = 390/642 (60%), Gaps = 33/642 (5%)
Query: 21 TNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAI 80
++TN T + + N+F WN++I L +A+ + MR P TFP +
Sbjct: 60 SDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVL 119
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
K+C+ L DL G + H GF DVFV ++L+ +Y+KCG L DA K+FD+IP + N
Sbjct: 120 KACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDK--N 177
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
+VSWT++++GY+ REA+ +F+ L N+ DS I VLSAC++
Sbjct: 178 VVSWTAIISGYIGVGKFREAIDMFRRLL------------EMNLAPDSFTIVRVLSACTQ 225
Query: 201 VTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSI 260
+ E H +++ G V VG +L+D YA+ G+++ +R VFDGM EKD V+W ++
Sbjct: 226 LGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAM 285
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
I YA NGL EA+D+F QM + +VK + T+ VL A A LG L LG+ + V + +
Sbjct: 286 IQGYALNGLPKEAIDLFLQM-QRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNE 344
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
+ ++GT++ID+Y KCG + A + F MKEK+ W A+I+G M+ + + LF
Sbjct: 345 FLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFG 404
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
++ K G++P+ TF+ +L C+HAGLV EG + N+M F++ P +EHYGCMVDLLGRA
Sbjct: 405 QVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRA 464
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
G L EA+ LI M ++A+ +VWG+LLGACRIH++ L E+A K+L ELEP N G +VLLS
Sbjct: 465 GLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLS 524
Query: 501 NIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLE 560
NIY+ +W++ + R M +R+ K PG S +E+ G VH FLVGDK HP EKIY L+
Sbjct: 525 NIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLD 584
Query: 561 ELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLR 602
EL K++ GYV V+ D+++EEKE L HSEKLA NLR
Sbjct: 585 ELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLR 644
Query: 603 VCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
VCGDCH I+LIS + REI VRD+ RFH F++G CSC DYW
Sbjct: 645 VCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/630 (42%), Positives = 389/630 (61%), Gaps = 34/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V NV SW ++IA A+ G EA F+ M + + P R TF + +CS+ L G
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG 432
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q G+ D V +AL+ MY+KCG L DA ++F++I ++ N+V+W +M+T YV
Sbjct: 433 QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQ--NVVAWNAMITAYV 490
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q++ AL F+ L E G NS S+L+ C + + H
Sbjct: 491 QHEQYDNALATFQALLKE-----GIKPNSST-------FTSILNVCKSSDSLELGKWVHF 538
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++K G +S++ V N L+ + G + ++ +F+ M ++D V+WN+IIA + Q+G
Sbjct: 539 LIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQV 598
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A D F +M++ + +K + +T + +L A A L G+ +H + + + V+VGT +I
Sbjct: 599 AFDYF-KMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLI 657
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
MY KCG ++ A + F+++ +KNV SWT+MI GY H R +EAL+LFY+M + GV+P++I
Sbjct: 658 SMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWI 717
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TFV LSAC+HAGL++EG H +M EFNIEP +EHYGCMVDL GRAG L EA + I
Sbjct: 718 TFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIK 776
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M+V+ D VWG+LLGAC++H NV+L E AA+K EL+PN+ G V+LSNIYA AG W++V
Sbjct: 777 MQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEV 836
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+ R +M +R + K PG S +E+ GKVH F DK HPQ E+I+ LE L+++++++GYV
Sbjct: 837 AKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYV 896
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D V+HDV+ EKE L HSE+LA NLRVCGDCHT + I
Sbjct: 897 PDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFI 956
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+ R+I+ RDS RFH+FKDG+CSCGD+W
Sbjct: 957 SKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 248/478 (51%), Gaps = 33/478 (6%)
Query: 32 YVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS 91
+ D + N+V+ L++ G EA++ + + R T+ ++ C +L
Sbjct: 69 FADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGD 128
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G++ + G D+F+ + LI+MY+KCG A+++FD++ R +++ SW +L GY
Sbjct: 129 GERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDM--REKDVYSWNLLLGGY 186
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
VQ+ EA L ++ + D+V D S+L+AC+ +
Sbjct: 187 VQHGLYEEAFKLHEQMV------------QDSVKPDKRTFVSMLNACADARNVDKGRELY 234
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
++K G+D+++ VG LI+ + + G + + KVFD + +D VTW S+I A++G
Sbjct: 235 NLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFK 294
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+A ++F +M + V+ + V ++L A H L GK +H ++ ++ + + VGT+I
Sbjct: 295 QACNLFQRM-EEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAI 353
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ MY KCG ++ A + F+ +K +NV SWTAMIAG+ H R EA F KMI++G+ PN
Sbjct: 354 LSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNR 413
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG-------CMVDLLGRAGKLK 444
+TF+S+L ACS ++ G + + IE G YG ++ + + G LK
Sbjct: 414 VTFMSILGACSSPSALKRGQQIQDHI-----IEAG---YGSDDRVRTALLSMYAKCGSLK 465
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--LEPNNCGYHVLLS 500
+A+ + E + K + V W +++ A H+ D + L + ++PN+ + +L+
Sbjct: 466 DAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 270/635 (42%), Positives = 393/635 (61%), Gaps = 35/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +++ V SWN++IA ++ G + +AL M+ P T + + + +
Sbjct: 204 MFDRMPERDLV-SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H A GF + V +S+AL DMYSKCG + AR +FD + Q+ +VSW SM
Sbjct: 263 LLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQK--TVVSWNSM 320
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GYVQN +A+ +F++ L E + G V I L AC+ +
Sbjct: 321 MDGYVQNGEPEKAIAVFEKMLEEGIDPTG------------VTIMEALHACADLGDLERG 368
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H FV + S++ V N+LI Y++ VD++ +F+ + + V+WN++I YAQN
Sbjct: 369 KFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQN 428
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G +EAL+ F +M KS +K ++ T+ +V+ A+A L V R K IH +I+ L++++ V
Sbjct: 429 GRVSEALNCFSEM-KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFV 487
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
T+++DMY KCG + +ARK F+ + +++V +W AMI GYG H R ALDLF KM K V
Sbjct: 488 TTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAV 547
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
PN IT++SV+SACSH+GLV EG +M ++ +EP ++HYG MVDLLGRAG++KEA+
Sbjct: 548 EPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAW 607
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
D IE M + V+G+ GAC+IHKN+++GE AAKKLFEL P+ GYHVLL+NIYA+
Sbjct: 608 DFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTS 667
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+W V R M+ + L KTPG S+VELR +VH+F G HPQ ++IY +LEEL +++
Sbjct: 668 KWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIK 727
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV D T++I DV+ + +E L HSEKLA NLRVCGDCH
Sbjct: 728 AAGYVPD-TNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHN 786
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ IS V REI+VRD +RFH+FK+G+CSCGDYW
Sbjct: 787 ATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/502 (30%), Positives = 252/502 (50%), Gaps = 39/502 (7%)
Query: 17 DKHSTNTNLTTLFNKYVDKNN---VFS---------WNSVIADLARGGDSVEALRAFSSM 64
++H T L +LF+KY N VF +++++ A+ AL M
Sbjct: 79 NEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRM 138
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
R + P F +K C DL GK+ H Q F +VF + +++MY+KC ++
Sbjct: 139 RYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQI 198
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
DA K+FD +P+ R++VSW +++ G+ QN A++AL E +L + G
Sbjct: 199 DDAYKMFDRMPE--RDLVSWNTIIAGFSQNGFAKKAL----ELVLRMQDEGQRP------ 246
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
DS+ + +VL A + V + V + HG+ I+ GF V + L D Y++ G V+ +R
Sbjct: 247 --DSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARL 304
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
+FDGM +K V+WNS++ Y QNG +A+ VF++M++ + VT+ L A A LG
Sbjct: 305 IFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEE-GIDPTGVTIMEALHACADLG 363
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L GK +H V +++L + V S+I MY KC +VD+A FN + + SW AMI
Sbjct: 364 DLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMIL 423
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
GY + R EAL+ F +M G++P+ T VSV+ A + + + W++ + ++
Sbjct: 424 GYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA-KWIHGLIIRSCLD 482
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
+ +VD+ + G + A L + M + W +++ H LG AA
Sbjct: 483 KNIFVTTALVDMYSKCGAIHMARKLFD-MISDRHVITWNAMIDGYGTH---GLGR-AALD 537
Query: 485 LFE------LEPNNCGYHVLLS 500
LF+ +EPN+ Y ++S
Sbjct: 538 LFDKMKKGAVEPNDITYLSVIS 559
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 175/344 (50%), Gaps = 18/344 (5%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
+K ++S+ ++++ + L +D+ V SWNS++ + G+ +A+ F
Sbjct: 279 FAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFE 338
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
M + + PT T A+ +C+ L DL GK H+ D+ V ++LI MYSKC
Sbjct: 339 KMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCK 398
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+ A +F+ + R VSW +M+ GY QN EAL F E S
Sbjct: 399 RVDIASDIFNNLNGRTH--VSWNAMILGYAQNGRVSEALNCFSEM------------KSL 444
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
+ DS + SV+ A + ++V + HG +I+ D + V L+D Y++ G + ++
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
RK+FD + ++ +TWN++I Y +GL ALD+FD+M K V+ N +T +V+ A +H
Sbjct: 505 RKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGA-VEPNDITYLSVISACSH 563
Query: 303 LGVLRLGKCIHDQVIKMD--LEESVIVGTSIIDMYCKCGQVDLA 344
G++ G H + +K D LE S+ +++D+ + G++ A
Sbjct: 564 SGLVDEG-LRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEA 606
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 130/258 (50%), Gaps = 11/258 (4%)
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
VIK G +E L+ +++ G ++ + +VF+ + +K +++++ YA+N
Sbjct: 71 LVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLET 130
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL +M + DVK + +L L+ GK IH Q+I +V T ++
Sbjct: 131 ALAFLCRM-RYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVV 189
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+MY KC Q+D A K F++M E+++ SW +IAG+ + A++AL+L +M G RP+ I
Sbjct: 190 NMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSI 249
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRAGKLKEAYD 448
T V+VL A + GL+ G H + I G V + D+ + G ++ A
Sbjct: 250 TLVTVLPAAADVGLLMVGKSI-----HGYAIRAGFAKLVNISTALADMYSKCGSVETARL 304
Query: 449 LIEGMKVKADFVVWGSLL 466
+ +GM K V W S++
Sbjct: 305 IFDGMDQKT-VVSWNSMM 321
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 267/624 (42%), Positives = 395/624 (63%), Gaps = 34/624 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SWN++I+ L + G++ +AL MR + T + C L D+ + H
Sbjct: 283 SWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYV 342
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G D+FVS+ALI+MY+K G L DARK F ++ I ++VSW S++ Y QND+
Sbjct: 343 IKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM--FITDVVSWNSIIAAYEQNDDPVT 400
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A F + L + + V++AS++ A SR N + HGF+++RG+
Sbjct: 401 AHGFFVKMQLNGFQPD---------LLTLVSLASIV-AQSRDCKN--SRSVHGFIMRRGW 448
Query: 220 DSE-VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
E V +GN ++D YA+ G +D + KVF+ + KD ++WN++I YAQNGLA+EA++V+
Sbjct: 449 LMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYK 508
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
M + ++ N T ++L A AH+G L+ G IH +VIK +L V V T +ID+Y KC
Sbjct: 509 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKC 568
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G++ A F Q+ +++ +W A+I+ +G+H A + L LF +M+ GV+P+++TFVS+L
Sbjct: 569 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLL 628
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
SACSH+G V+EG W + E+ I+P ++HYGCMVDLLGRAG L+ AYD I+ M ++ D
Sbjct: 629 SACSHSGFVEEG-KWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPD 687
Query: 459 FVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSL 518
+WG+LLGACRIH N++LG+ A+ +LFE++ N GY+VLLSNIYAN G+WE V++ RSL
Sbjct: 688 ASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSL 747
Query: 519 MKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSV 578
+ R L KTPG+S +E+ KV F G++ HP+ ++IYE L L K++ +GY+ D + V
Sbjct: 748 ARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFV 807
Query: 579 IHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
+ DV+++EKE L HSE+LA NLRVCGDCH + IS++ R
Sbjct: 808 LQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQR 867
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
EIVVRDS RFH+FKDG+CSCGDYW
Sbjct: 868 EIVVRDSNRFHHFKDGICSCGDYW 891
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/520 (29%), Positives = 272/520 (52%), Gaps = 41/520 (7%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
+S +S+ + N+ + + +L+ + + +V++WNS+I+ G EA+ F +
Sbjct: 149 QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQL 208
Query: 65 RKLS-LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
+S + P TFP +K+C L D G++ H AF GF +VFV+++LI MYS+ G
Sbjct: 209 LLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGF 265
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
AR LFD++P R++ SW +M++G +QN NA +AL + E LE
Sbjct: 266 TGIARSLFDDMP--FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE------------G 311
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ ++ V + S+L C ++ H +VIK G + ++ V N LI+ YA+ G+++ +R
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
K F M D V+WNSIIA Y QN A F +M + + + +TL ++ +A
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKM-QLNGFQPDLLTLVSLASIVAQS 430
Query: 304 GVLRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
+ + +H +++ L E V++G +++DMY K G +D A K F + K+V SW +
Sbjct: 431 RDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTL 490
Query: 363 IAGYGMHCRAREALDLFYKMIK--AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH- 419
I GY + A EA+++ YKM++ + PN T+VS+L A +H G +Q+G + G
Sbjct: 491 ITGYAQNGLASEAIEV-YKMMEECKEIIPNQGTWVSILPAYAHVGALQQG---MKIHGRV 546
Query: 420 -EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD-- 476
+ N+ V C++D+ G+ G+L +A L + ++ V W +++ IH + +
Sbjct: 547 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS-VTWNAIISCHGIHGHAEKT 605
Query: 477 ---LGEIAAKKLFELEPNNCGYHVLLSNI----YANAGRW 509
GE+ + ++P++ + LLS + G+W
Sbjct: 606 LKLFGEMLDEG---VKPDHVTFVSLLSACSHSGFVEEGKW 642
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 195/386 (50%), Gaps = 40/386 (10%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K H + G + +F+S+ L+++Y+ G++S +R FD+IPQ +++ +W SM++ Y
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQ--KDVYAWNSMISAY 192
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
V N + EA+ F + LL SE + D VL AC + V+G H
Sbjct: 193 VHNGHFHEAIGCFYQLLL-------VSE----IRPDFYTFPPVLKACGTL-VDG--RKIH 238
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+ K GF V V +LI Y+R G ++R +FD M +D +WN++I+ QNG AA
Sbjct: 239 CWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAA 298
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+ALDV D+M + +K N VT+ ++L LG + IH VIK LE + V ++
Sbjct: 299 QALDVLDEM-RLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNAL 357
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
I+MY K G ++ ARKAF QM +V SW ++IA Y + A F KM G +P+
Sbjct: 358 INMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDL 417
Query: 392 ITFVSVLSACS-----------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+T VS+ S + H +++ GW + V +VD+ +
Sbjct: 418 LTLVSLASIVAQSRDCKNSRSVHGFIMRRGW-----------LMEDVVIGNAVVDMYAKL 466
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLL 466
G L A+ + E + VK D + W +L+
Sbjct: 467 GLLDSAHKVFEIIPVK-DVISWNTLI 491
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 133/262 (50%), Gaps = 13/262 (4%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H ++ G + + L++ YA G V +SR FD + +KD WNS+I+ Y NG
Sbjct: 139 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHF 198
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA+ F Q++ ++++ + T VL A G L G+ IH K+ + +V V S
Sbjct: 199 HEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAAS 255
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+I MY + G +AR F+ M +++ SW AMI+G + A +ALD+ +M G++ N
Sbjct: 256 LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMN 315
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEA 446
++T VS+L C G + + H + I+ G+E ++++ + G L++A
Sbjct: 316 FVTVVSILPVCPQLGDISTA-----MLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDA 370
Query: 447 YDLIEGMKVKADFVVWGSLLGA 468
+ M + D V W S++ A
Sbjct: 371 RKAFQQMFI-TDVVSWNSIIAA 391
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 271/586 (46%), Positives = 378/586 (64%), Gaps = 36/586 (6%)
Query: 77 PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
P +K+C DL GK+ H GF DVFV+++L+ MYS+ G + DARKLFD++P
Sbjct: 1 PPVVKACG---DLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
R R SW +M++GY QN NA EAL + E LE V +D++ +ASVL
Sbjct: 58 RDRG--SWNAMISGYCQNGNAAEALDIADEMRLE------------GVKMDAITVASVLP 103
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
C++V + H +VIK G + E+ V N LI+ YA+ G + ++KVF G++ KD V+
Sbjct: 104 VCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVS 162
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
WN++I YAQNGLA+EA++V+ M + ++ N T ++L A +H+G L+ G IH QV
Sbjct: 163 WNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQV 222
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
IK L V VGT +IDMY KCG++D A F Q+ KN W AMI+ YG+H +AL
Sbjct: 223 IKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKAL 282
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDL 436
+LF +M V+P++ITFVS+LSACSH+GLV + N M E+ I+P ++HYGCMVDL
Sbjct: 283 ELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDL 342
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYH 496
GRAG+L+ A++ I+ M ++ D WG+LL ACRIH N++LG+ A+++LFE++ N GY+
Sbjct: 343 FGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYY 402
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
VLLSNIYAN G+WE V+ RSL ++R L K PG+S + L KV F G++ HP+ E+IY
Sbjct: 403 VLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIY 462
Query: 557 EYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------------- 599
L +L K++ +GYV D V+ DV+++EKE L HSE+LA
Sbjct: 463 RELRDLTSKIKTIGYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIF 522
Query: 600 -NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCHTV + IS + +REI+VRDS RFH+FK G CSCGDYW
Sbjct: 523 KNLRVCGDCHTVTKFISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 175/332 (52%), Gaps = 17/332 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SWN++I+ + G++ EAL MR + T + C+ + D+ SGK H
Sbjct: 62 SWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYV 121
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G ++FVS+ALI+MY+K G L A+K+F + I+++VSW +++TGY QN A E
Sbjct: 122 IKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLL---IKDVVSWNTLITGYAQNGLASE 178
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+ ++ L+EE E + + S+L A S V HG VIK
Sbjct: 179 AIEVY--LLMEEHE---------EIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCL 227
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
S+V VG LID Y + G +D + +F + K++V WN++I+ Y +G +AL++F +
Sbjct: 228 YSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFRE 287
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK-CIHDQVIKMDLEESVIVGTSIIDMYCKC 338
M K+ VK + +T ++L A +H G++ + C + + ++ S+ ++D++ +
Sbjct: 288 M-KAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRA 346
Query: 339 GQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
G++++A +M + + +W A++ +H
Sbjct: 347 GELEMAFNFIKKMPIQPDASAWGALLNACRIH 378
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 116/233 (49%), Gaps = 27/233 (11%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRK-LSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
+V SWN++I A+ G + EA+ + M + + P + T+ + + S + L G +
Sbjct: 159 DVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRI 218
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H Q + DVFV + LIDMY KCG+L DA LF ++P+ +N V W +M++ Y +
Sbjct: 219 HGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPR--KNSVPWNAMISCYGVHG 276
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+ +AL LF+E ++ V D + S+LSACS + V++ F +
Sbjct: 277 DGEKALELFREM------------KAERVKPDHITFVSLLSACSHSGL--VSDAQWCFNM 322
Query: 216 KRGFDSEVGVGNTL------IDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
+ E G+ +L +D + R G ++++ M I+ DA W +++
Sbjct: 323 ---MEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALL 372
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+LF + KN+V WN++I+ GD +AL F M+ + P TF + +CS
Sbjct: 252 SLFYQVPRKNSV-PWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACS-- 308
Query: 87 HDLHSGKQAHQQAFI------FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
HSG + Q +G + ++D++ + GEL A ++P + +
Sbjct: 309 ---HSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQ-PD 364
Query: 141 IVSWTSMLT 149
+W ++L
Sbjct: 365 ASAWGALLN 373
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/635 (42%), Positives = 389/635 (61%), Gaps = 34/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K +++ V +W +I A G + E+L F MR+ + P + + +C+ L
Sbjct: 87 LFDKMQERDLV-TWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLG 145
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+H + F DV + +A+IDMY+KCG + AR++FD + ++ N++SW++M
Sbjct: 146 AMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEK--NVISWSAM 203
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y + R+AL LF+ L S + D + +AS+L ACS + +
Sbjct: 204 IAAYGYHGQGRKALDLFRMML------------SSGMLPDKITLASLLYACSDLKNLQMG 251
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H V K G D + V L+D Y + ++ +R +FD M E+D VTW +I YA+
Sbjct: 252 RLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAEC 311
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A E+L +FD+M + V + V + V+ A A LG + + I D + + + VI+
Sbjct: 312 GNANESLVLFDKM-REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVIL 370
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
GT++IDM+ KCG V+ AR+ F++M+EKNV SW+AMIA YG H + R+ALDLF M+++G+
Sbjct: 371 GTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGI 430
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
PN IT VS+L ACSHAGLV+EG + + M ++++ V+HY C+VDLLGRAG+L EA
Sbjct: 431 LPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEAL 490
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
LIE M V+ D +WG+ LGACR HK+V L E AA L EL+P N G+++LLSNIYANAG
Sbjct: 491 KLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAG 550
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RWEDV +TR LM RRL K PG++ +E+ K H F VGD HP+ ++IYE L+ L KL+
Sbjct: 551 RWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLE 610
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
VGYV D V+HDVD+E K L HSEKLA NLRVCGDCHT
Sbjct: 611 LVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHT 670
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+L+S + R I+VRD+ RFH+FK+G CSCGDYW
Sbjct: 671 FCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 263/485 (54%), Gaps = 34/485 (7%)
Query: 44 VIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFG 103
++ A+ GD + F + + P T P I++C L +L G+ H + FG
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 104 FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
D FV +AL+DMY KC E+ DAR LFD++ + R++V+WT M+ GY + A E+L+L
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQE--RDLVTWTVMIGGYAECGKANESLVL 118
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEV 223
F++ + V D VA+ +V+ AC+++ ++ ++ F +V
Sbjct: 119 FEKM------------REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDV 166
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
+G +ID YA+ G V+ +R++FD M EK+ ++W+++IA Y +G +ALD+F +M+ S
Sbjct: 167 ILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF-RMMLS 225
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL 343
+ + + +TL+++L A + L L++G+ IH V K L+ V +++DMY KC +++
Sbjct: 226 SGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIED 285
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
AR F++M E+++ +WT MI GY A E+L LF KM + GV P+ + V+V+ AC+
Sbjct: 286 ARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAK 345
Query: 404 AGLVQEGW---HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
G + + ++ + ++ G M+D+ + G ++ A ++ + M+ K + +
Sbjct: 346 LGAMHKARTIDDYIQRKKFQLDVILGT----AMIDMHAKCGCVESAREIFDRMEEK-NVI 400
Query: 461 VWGSLLGACRIH----KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA--NAGRWEDVER 514
W +++ A H K +DL + + + PN L+S +YA +AG E+ R
Sbjct: 401 SWSAMIAAYGYHGQGRKALDLFPMMLRS--GILPNKI---TLVSLLYACSHAGLVEEGLR 455
Query: 515 TRSLM 519
SLM
Sbjct: 456 FFSLM 460
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/624 (42%), Positives = 395/624 (63%), Gaps = 34/624 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SWN++I+ L + G++ +AL MR + T + C L D+ + H
Sbjct: 283 SWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYV 342
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G D+FVS+ALI+MY+K G L DARK F ++ I ++VSW S++ Y QND+
Sbjct: 343 IKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM--FITDVVSWNSIIAAYEQNDDPVT 400
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A F + L + + V++AS++ A SR N + HGF+++RG+
Sbjct: 401 AHGFFVKMQLNGFQPD---------LLTLVSLASIV-AQSRDCKN--SRSVHGFIMRRGW 448
Query: 220 DSE-VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
E V +GN ++D YA+ G +D + KVF+ ++ KD ++WN++I YAQNGLA+EA++V+
Sbjct: 449 LMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYK 508
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
M + ++ N T ++L A AH+G L+ G IH +VIK +L V V T +ID+Y KC
Sbjct: 509 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKC 568
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G++ A F Q+ +++ +W A+I+ +G+H A + L LF +M+ GV+P+++TFVS+L
Sbjct: 569 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLL 628
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
SACSH+G V+EG W + E+ I+P ++HYGCMVDLLGRAG L+ AY I+ M ++ D
Sbjct: 629 SACSHSGFVEEG-KWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPD 687
Query: 459 FVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSL 518
+WG+LLGACRIH N++LG+ A+ +LFE++ N GY+VLLSNIYAN G+WE V++ RSL
Sbjct: 688 ASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSL 747
Query: 519 MKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSV 578
+ R L KTPG+S +E+ KV F G++ HP+ ++IYE L L K++ +GY+ D + V
Sbjct: 748 ARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFV 807
Query: 579 IHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
+ DV+++EKE L HSE+LA NLRVCGDCH + IS++ R
Sbjct: 808 LQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQR 867
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
EIVVRDS RFH+FKDG+CSCGDYW
Sbjct: 868 EIVVRDSNRFHHFKDGICSCGDYW 891
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 154/520 (29%), Positives = 272/520 (52%), Gaps = 41/520 (7%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
+S +S+ + N+ + + +L+ + + +V++WNS+I+ G EA+ F +
Sbjct: 149 QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQL 208
Query: 65 RKLS-LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
+S + P TFP +K+C L D G++ H AF GF +VFV+++LI MYS+ G
Sbjct: 209 LLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGF 265
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
AR LFD++P R++ SW +M++G +QN NA +AL + E LE
Sbjct: 266 TGIARSLFDDMP--FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE------------G 311
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ ++ V + S+L C ++ H +VIK G + ++ V N LI+ YA+ G+++ +R
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
K F M D V+WNSIIA Y QN A F +M + + + +TL ++ +A
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKM-QLNGFQPDLLTLVSLASIVAQS 430
Query: 304 GVLRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
+ + +H +++ L E V++G +++DMY K G +D A K F + K+V SW +
Sbjct: 431 RDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTL 490
Query: 363 IAGYGMHCRAREALDLFYKMIK--AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH- 419
I GY + A EA+++ YKM++ + PN T+VS+L A +H G +Q+G + G
Sbjct: 491 ITGYAQNGLASEAIEV-YKMMEECKEIIPNQGTWVSILPAYAHVGALQQG---MRIHGRV 546
Query: 420 -EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD-- 476
+ N+ V C++D+ G+ G+L +A L + ++ V W +++ IH + +
Sbjct: 547 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS-VTWNAIISCHGIHGHAEKT 605
Query: 477 ---LGEIAAKKLFELEPNNCGYHVLLSNI----YANAGRW 509
GE+ + ++P++ + LLS + G+W
Sbjct: 606 LKLFGEMLDEG---VKPDHVTFVSLLSACSHSGFVEEGKW 642
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 195/386 (50%), Gaps = 40/386 (10%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K H + G + +F+S+ L+++Y+ G++S +R FD+IPQ +++ +W SM++ Y
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQ--KDVYTWNSMISAY 192
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
V N + EA+ F + LL SE + D VL AC + V+G H
Sbjct: 193 VHNGHFHEAIGCFYQLLL-------VSE----IRPDFYTFPPVLKACGTL-VDG--RRIH 238
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+ K GF V V +LI Y+R G ++R +FD M +D +WN++I+ QNG AA
Sbjct: 239 CWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAA 298
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+ALDV D+M + +K N VT+ ++L LG + IH VIK LE + V ++
Sbjct: 299 QALDVLDEM-RLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNAL 357
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
I+MY K G ++ ARKAF QM +V SW ++IA Y + A F KM G +P+
Sbjct: 358 INMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDL 417
Query: 392 ITFVSVLSACS-----------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+T VS+ S + H +++ GW + V +VD+ +
Sbjct: 418 LTLVSLASIVAQSRDCKNSRSVHGFIMRRGW-----------LMEDVVIGNAVVDMYAKL 466
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLL 466
G L A+ + E + VK D + W +L+
Sbjct: 467 GLLDSAHKVFEIILVK-DVISWNTLI 491
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 134/262 (51%), Gaps = 13/262 (4%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H ++ G + + L++ YA G V +SR FD + +KD TWNS+I+ Y NG
Sbjct: 139 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHF 198
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA+ F Q++ ++++ + T VL A G L G+ IH K+ + +V V S
Sbjct: 199 HEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVAAS 255
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+I MY + G +AR F+ M +++ SW AMI+G + A +ALD+ +M G++ N
Sbjct: 256 LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMN 315
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEA 446
++T VS+L C G + + H + I+ G+E ++++ + G L++A
Sbjct: 316 FVTVVSILPVCPQLGDISTA-----MLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDA 370
Query: 447 YDLIEGMKVKADFVVWGSLLGA 468
+ M + D V W S++ A
Sbjct: 371 RKAFQQMFI-TDVVSWNSIIAA 391
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/673 (41%), Positives = 394/673 (58%), Gaps = 65/673 (9%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
N + L + +++ N F WN++I + V A+ + M + P TFP +K
Sbjct: 81 NLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLK 140
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS---------------- 125
SC+ + GKQ H G D FV ++LI+MY++ GEL
Sbjct: 141 SCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVS 200
Query: 126 ---------------DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
DAR+LF+EIP +R+ VSW +M+ GY Q+ EAL F+E
Sbjct: 201 FTALITGYTLRGCLDDARRLFEEIP--VRDAVSWNAMIAGYAQSGRFEEALAFFQEM--- 255
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI 230
NV + + +VLSAC++ + ++ G S + + N LI
Sbjct: 256 ---------KRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALI 306
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
D Y++ G +D +R +F+G+ EKD ++WN +I Y+ EAL +F +M +S +V+ N
Sbjct: 307 DMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQS-NVEPND 365
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE-ESVIVGTSIIDMYCKCGQVDLARKAFN 349
VT ++L A A+LG L LGK IH + K L + + TS+IDMY KCG ++ A++ F
Sbjct: 366 VTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFA 425
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
MK K++ SW AMI+G MH A AL+LF +M G P+ ITFV VLSACSHAGLV+
Sbjct: 426 GMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVEL 485
Query: 410 GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G ++M +++I P ++HYGCM+DLLGRAG EA L++ M++K D +WGSLLGAC
Sbjct: 486 GRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGAC 545
Query: 470 RIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPG 529
R+H NV+LGE AAK LFELEP N G +VLLSNIYA AGRW+DV R R+ + ++ + K PG
Sbjct: 546 RVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPG 605
Query: 530 FSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEM 589
S +E+ VH FLVGDK H Q + IY+ L+E++ L++ G+V D + V++D+D+E KE
Sbjct: 606 CSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEG 665
Query: 590 TLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFH 631
+L HSEKLA NLRVCG+CH+ I+LISK+ +REI+ RD RFH
Sbjct: 666 SLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFH 725
Query: 632 YFKDGLCSCGDYW 644
+FKDG CSC DYW
Sbjct: 726 HFKDGSCSCMDYW 738
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 217/457 (47%), Gaps = 56/457 (12%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQR 137
+ +C + +L KQ H Q G H F S LI+ S G LS A LF+ I Q
Sbjct: 39 LSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ- 94
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
N W +M+ G + + A+ + LL CG V +S +L +
Sbjct: 95 -PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLL----CG--------VEPNSYTFPFLLKS 141
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH------------------- 238
C++V + HG V+K G +S+ V +LI+ YA+ G
Sbjct: 142 CAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSF 201
Query: 239 ------------VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
+D +R++F+ + +DAV+WN++IA YAQ+G EAL F +M K +V
Sbjct: 202 TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEM-KRANV 260
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
N T+ VL A A G L LG + + L ++ + ++IDMY KCG +D AR
Sbjct: 261 APNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARD 320
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F + EK++ SW MI GY +EAL LF KM ++ V PN +TFVS+L AC++ G
Sbjct: 321 LFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGA 380
Query: 407 VQEGWHWLNT-MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
+ G W++ + +F + ++D+ + G ++ A + GMK K+ W ++
Sbjct: 381 LDLG-KWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKS-LGSWNAM 438
Query: 466 LGACRIHKNVDLGEIAAKKLFE--LEPNNCGYHVLLS 500
+ +H + ++ +++ + EP++ + +LS
Sbjct: 439 ISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLS 475
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 17/224 (7%)
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKC---GQVDLARKAFNQMKEKNVRSWTAMIAGY 366
K IH Q+IK L + + +I+ +C G + A F +++ N W MI G
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIE-FCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGN 107
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH--EFNIE 424
+ A+D + +M+ GV PN TF +L +C+ G QEG GH + +E
Sbjct: 108 SLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEG---KQIHGHVLKLGLE 164
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
+ ++++ + G+L A +L+ D V + +L+ + +D A++
Sbjct: 165 SDPFVHTSLINMYAQNGELGYA-ELVFSKSSLRDAVSFTALITGYTLRGCLD----DARR 219
Query: 485 LFELEP--NNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
LFE P + ++ +++ YA +GR+E+ MK +A
Sbjct: 220 LFEEIPVRDAVSWNAMIAG-YAQSGRFEEALAFFQEMKRANVAP 262
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/624 (42%), Positives = 396/624 (63%), Gaps = 34/624 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SWN++I+ L + G++ +AL MR + T + C+ L D+ + H
Sbjct: 240 SWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYV 299
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G ++FVS+ALI+MY+K G L DA+K+F ++ +R++VSW S++ Y QND+
Sbjct: 300 IKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQM--FLRDVVSWNSIIAAYEQNDDPVT 357
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A F + L E + V++AS+ +A SR N + HGF+++RG+
Sbjct: 358 ARGFFFKMQLNGLEPD---------LLTLVSLASI-AAQSRDYKN--SRSVHGFIMRRGW 405
Query: 220 DSE-VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
E V +GN ++D YA+ G +D + KVF+ + KD V+WN++I+ Y QNGLA+EA++V+
Sbjct: 406 LMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYR 465
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
M + ++K N T ++L A AH+G L+ G IH +IK +L V VGT +ID+Y KC
Sbjct: 466 MMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKC 525
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G++ A F Q+ ++ W A+I+ +G+H +AL LF +M GV+P+++TF+S+L
Sbjct: 526 GRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLL 585
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
SACSH+GLV EG W + E+ I+P ++HYGCMVDLLGRAG L+ AYD I+ M + D
Sbjct: 586 SACSHSGLVDEG-KWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPD 644
Query: 459 FVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSL 518
+WG+LLGACRIH N++LG+ A+ +LFE++ N GY+VLLSNIYAN G+WE V++ RSL
Sbjct: 645 ASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSL 704
Query: 519 MKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSV 578
+ R L KTPG+S +E+ +V F G++ HP+ ++IY L L K++ +GY+ D + V
Sbjct: 705 ARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFV 764
Query: 579 IHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
+ DV+++EKE L HSE+LA NLRVCGDCH + IS++ +R
Sbjct: 765 LQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITER 824
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
EIVVRDSKRFH+FK+G+CSCGDYW
Sbjct: 825 EIVVRDSKRFHHFKNGICSCGDYW 848
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 155/479 (32%), Positives = 263/479 (54%), Gaps = 37/479 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHS 91
+ + +V++WNS+I+ R G EA+ F + ++ TFP +K+C L D
Sbjct: 134 IQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD--- 190
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G++ H F GF DVFV+++LI MYS+ G + AR LFD++P R++ SW +M++G
Sbjct: 191 GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMP--FRDMGSWNAMISGL 248
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+QN NA +AL + E LE + +DSV +AS+L C+++ H
Sbjct: 249 IQNGNAAQALDVLDEMRLE------------GINMDSVTVASILPVCAQLGDISTATLIH 296
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+VIK G + E+ V N LI+ YA+ G++ ++KVF M +D V+WNSIIA Y QN
Sbjct: 297 LYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPV 356
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGTS 330
A F +M + ++ + +TL ++ A + + +H +++ L E+V++G +
Sbjct: 357 TARGFFFKM-QLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNA 415
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA--GVR 388
++DMY K G +D A K FN + K+V SW +I+GY + A EA+++ Y+M++ ++
Sbjct: 416 VMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEV-YRMMEECREIK 474
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGH--EFNIEPGVEHYGCMVDLLGRAGKLKEA 446
N T+VS+L+A +H G +Q+G + GH + N+ V C++DL G+ G+L +A
Sbjct: 475 LNQGTWVSILAAYAHVGALQQG---MRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDA 531
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE-----PNNCGYHVLLS 500
L + ++ V W +++ IH + GE A K E++ P++ + LLS
Sbjct: 532 MCLFYQVPRESS-VPWNAIISCHGIHGH---GEKALKLFREMQDEGVKPDHVTFISLLS 586
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 197/386 (51%), Gaps = 40/386 (10%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K+ H + G + F+S L+++Y+ G++S +R FD+I QR +++ +W SM++ Y
Sbjct: 92 AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQI-QR-KDVYTWNSMISAY 149
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
V+N + REA+ F + LL D VL AC + V+G H
Sbjct: 150 VRNGHFREAIDCFYQLLL-----------VTKFQADFYTFPPVLKAC-QTLVDG--RKIH 195
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+V K GF +V V +LI Y+R G V ++R +FD M +D +WN++I+ QNG AA
Sbjct: 196 CWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAA 255
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+ALDV D+M + + ++VT++++L A LG + IH VIK LE + V ++
Sbjct: 256 QALDVLDEM-RLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNAL 314
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
I+MY K G + A+K F QM ++V SW ++IA Y + A F+KM G+ P+
Sbjct: 315 INMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDL 374
Query: 392 ITFVSVLSACS-----------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+T VS+ S + H +++ GW + V ++D+ +
Sbjct: 375 LTLVSLASIAAQSRDYKNSRSVHGFIMRRGW-----------LMEAVVIGNAVMDMYAKL 423
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLL 466
G + A+ + + VK D V W +L+
Sbjct: 424 GVIDSAHKVFNLIPVK-DVVSWNTLI 448
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 165/337 (48%), Gaps = 20/337 (5%)
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
+ + S+ +C++ + + H ++ G + L++ YA G V +SR F
Sbjct: 75 EEIDFNSLFDSCTKTLL---AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTF 131
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D + KD TWNS+I+ Y +NG EA+D F Q++ T + + T VL A L
Sbjct: 132 DQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQ---TL 188
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
G+ IH V K+ + V V S+I MY + G V +AR F+ M +++ SW AMI+G
Sbjct: 189 VDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGL 248
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ A +ALD+ +M G+ + +T S+L C+ G + T+ H + I+ G
Sbjct: 249 IQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTA-----TLIHLYVIKHG 303
Query: 427 VEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
+E ++++ + G L +A + + M ++ D V W S++ A ++ D A
Sbjct: 304 LEFELFVSNALINMYAKFGNLGDAQKVFQQMFLR-DVVSWNSIIAA---YEQNDDPVTAR 359
Query: 483 KKLFELEPNNCGYHVL-LSNIYANAGRWEDVERTRSL 518
F+++ N +L L ++ + A + D + +RS+
Sbjct: 360 GFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSV 396
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 268/653 (41%), Positives = 397/653 (60%), Gaps = 35/653 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
++++S K + + +FN V NV SW ++IA A+ G EA F+ M + +
Sbjct: 345 TALLSMYTKCGSMEDALEVFN-LVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGI 403
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P R TF + +CS L G+Q H + G+ D V +AL+ MY+KCG L DAR
Sbjct: 404 EPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARN 463
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F+ I ++ N+V+W +M+T YVQ++ A+ F+ L E + DS
Sbjct: 464 VFERISKQ--NVVAWNAMITAYVQHEKYDNAVATFQALLKE------------GIKPDSS 509
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
S+L+ C + + +I+ GF+S++ + N L+ + G + + +F+ M
Sbjct: 510 TFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDM 569
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
E+D V+WN+IIA + Q+G A D F +M++ + VK + +T + +L A A L G
Sbjct: 570 PERDLVSWNTIIAGFVQHGENQFAFDYF-KMMQESGVKPDQITFTGLLNACASPEALTEG 628
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
+ +H + + L+ V+VGT +I MY KCG +D A F+ + +KNV SWT+MI GY H
Sbjct: 629 RRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQH 688
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
R +EAL+LF +M + GV+P++ITFV LSAC+HAGL++EG H +M +FNIEP +EH
Sbjct: 689 GRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEH 747
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
YGCMVDL GRAG L EA + I M+VK D +WG+LLGAC++H +V+L E A+K EL+
Sbjct: 748 YGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELD 807
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
PN+ G +V+LSNIYA AG W++V + R +M +R + K PG S +E+ G+VH F DK H
Sbjct: 808 PNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTH 867
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
PQ E+I+ L L+++++++GYV D V+HDV+ EKE L HSE+LA
Sbjct: 868 PQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPP 927
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCHT +LISK+ R+I+ RDS RFH+FKDG+CSCGD+W
Sbjct: 928 LTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 237/453 (52%), Gaps = 29/453 (6%)
Query: 30 NKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDL 89
N++VD N N+ + L++ G EA+ S+ + R T+ ++ C +L
Sbjct: 61 NEFVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNL 120
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
G++ H D+F+ + LI MY+KCG + A+++FDE+P + ++ SW +L
Sbjct: 121 GDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDK--DVYSWNLLLG 178
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
GYVQ+ EA L ++ + D V D +L+AC+ V +G
Sbjct: 179 GYVQHRRYEEAFRLHEQMV------------QDGVKPDKYTFVYMLNACA--DAKNVDKG 224
Query: 210 AHGF--VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
F ++ G+D+++ VG LI+ + + G VD + KVF+ + +D +TW S+I A++
Sbjct: 225 GELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARH 284
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+A ++F Q+++ V+ + V ++L A H L GK +H ++ ++ L+ + V
Sbjct: 285 RQFKQACNLF-QVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYV 343
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
GT+++ MY KCG ++ A + FN +K +NV SWTAMIAG+ H R EA F KMI++G+
Sbjct: 344 GTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGI 403
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV----EHYGCMVDLLGRAGKL 443
PN +TF+S+L ACS +++G H+ I+ G ++ + + G L
Sbjct: 404 EPNRVTFMSILGACSRPSALKQG-----RQIHDRIIKAGYITDDRVRTALLSMYAKCGSL 458
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
+A ++ E + K + V W +++ A H+ D
Sbjct: 459 MDARNVFERIS-KQNVVAWNAMITAYVQHEKYD 490
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 236/448 (52%), Gaps = 19/448 (4%)
Query: 22 NTN-LTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAI 80
NTN +F++ DK+ V+SWN ++ + EA R M + + P + TF +
Sbjct: 154 NTNSAKQIFDEMPDKD-VYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYML 212
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
+C+ ++ G + G+ D+FV +ALI+M+ KCG + DA K+F+ +P+ R+
Sbjct: 213 NACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPR--RD 270
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
+++WTSM+TG ++ ++A LF+ ++EE + V D VA S+L AC+
Sbjct: 271 LITWTSMITGLARHRQFKQACNLFQ--VMEE----------EGVQPDKVAFVSLLKACNH 318
Query: 201 VTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSI 260
+ H + + G D+E+ VG L+ Y + G ++ + +VF+ + ++ V+W ++
Sbjct: 319 PEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAM 378
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
IA +AQ+G EA F++M++S ++ N VT ++L A + L+ G+ IHD++IK
Sbjct: 379 IAGFAQHGRMEEAFLFFNKMIES-GIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAG 437
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
V T+++ MY KCG + AR F ++ ++NV +W AMI Y H + A+ F
Sbjct: 438 YITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQ 497
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
++K G++P+ TF S+L+ C ++ G W+ ++ E + +V +
Sbjct: 498 ALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESDLHIRNALVSMFVNC 556
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGA 468
G L A +L M + D V W +++
Sbjct: 557 GDLMSAMNLFNDMPER-DLVSWNTIIAG 583
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 267/637 (41%), Positives = 395/637 (62%), Gaps = 39/637 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +++ V WN++I+ A+ G AL M++ P T + + + +
Sbjct: 232 MFDRMPERDLV-CWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVG 290
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+ H + GF V VS+AL+DMYSKCG + AR +FD + + +VSW SM
Sbjct: 291 SLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGK--TVVSWNSM 348
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GYVQN + A+ +F++ + E+ E + +V + L AC+ + V
Sbjct: 349 IDGYVQNGDPGAAMEIFQKMMDEQVE------------MTNVTVMGALHACA--DLGDVE 394
Query: 208 EG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+G H + + S+V V N+LI Y++ VD++ ++F+ + K V+WN++I YA
Sbjct: 395 QGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYA 454
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QNG EA+D F +M + ++K ++ T+ +V+ A+A L VL K IH VI+ L+++V
Sbjct: 455 QNGRINEAIDYFCKM-QLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNV 513
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V T+++DMY KCG V ARK F+ M E++V +W AMI GYG H + AL+LF KM K
Sbjct: 514 FVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKE 573
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
++PN +TF+ VLSACSH+GLV+EG+ + +M ++ +EP ++HYG MVDLLGRA +L E
Sbjct: 574 VIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNE 633
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A+D I+ M ++ V+G++LGACRIHKNV+LGE AA ++F+L+P++ GYHVLL+NIYA
Sbjct: 634 AWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYAT 693
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
A W+ V R R+ M+ + + KTPG+S+VEL+ +VH F G HPQ +KIY +LE L +
Sbjct: 694 ASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNR 753
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++ GY+ D SV HDV+ KE L HSEKLA NLRVCGDC
Sbjct: 754 IKAAGYMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDC 812
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H + IS V REI+VRD +RFH+FKDG CSCGDYW
Sbjct: 813 HNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 151/501 (30%), Positives = 251/501 (50%), Gaps = 39/501 (7%)
Query: 18 KHSTNTNLTTLFNKYV---DKNNVFS---------WNSVIADLARGGDSVEALRAFSSMR 65
+H T L +LF K+ + VF +++++ AR +A+ F MR
Sbjct: 108 EHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMR 167
Query: 66 KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
+ P F +K C DL GK+ H Q + GF +VF + +++MY+KC +
Sbjct: 168 YDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVE 227
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
+A K+FD +P+ R++V W ++++GY QN + AL E +L E G
Sbjct: 228 EAYKMFDRMPE--RDLVCWNTIISGYAQNGFGKTAL----ELVLRMQEEGKRP------- 274
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
DS+ I S+L A + V + HG+ ++ GF+S V V L+D Y++ G V +R +
Sbjct: 275 -DSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLI 333
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD M K V+WNS+I Y QNG A+++F +M+ V+ VT+ L A A LG
Sbjct: 334 FDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDE-QVEMTNVTVMGALHACADLGD 392
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
+ G+ +H + +++L V V S+I MY KC +VD+A + F ++ K + SW AMI G
Sbjct: 393 VEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILG 452
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y + R EA+D F KM ++P+ T VSV+ A + ++ + W++ + ++
Sbjct: 453 YAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQA-KWIHGLVIRTCLDK 511
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
V +VD+ + G + A L + M + W +++ H LG+ AA +L
Sbjct: 512 NVFVATALVDMYAKCGAVHTARKLFDMMDER-HVTTWNAMIDGYGTH---GLGK-AALEL 566
Query: 486 FE------LEPNNCGYHVLLS 500
FE ++PN + +LS
Sbjct: 567 FEKMKKEVIKPNEVTFLCVLS 587
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 136/279 (48%), Gaps = 15/279 (5%)
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+IK G SE L+ + + G + + +VF + +K +++++ YA+N +
Sbjct: 99 LIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDD 158
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+ F +M + V+ + +L LR GK IH Q+I +V T ++
Sbjct: 159 AVSFFCRM-RYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVV 217
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+MY KC V+ A K F++M E+++ W +I+GY + + AL+L +M + G RP+ I
Sbjct: 218 NMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSI 277
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYD 448
T VS+L A + G ++ G H +++ G E + +VD+ + G + A
Sbjct: 278 TIVSILPAVADVGSLRIGRSI-----HGYSMRAGFESFVNVSTALVDMYSKCGSVGTARL 332
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
+ + M K V W S++ +N D G AA ++F+
Sbjct: 333 IFDRMTGKT-VVSWNSMIDG--YVQNGDPG--AAMEIFQ 366
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 267/659 (40%), Positives = 400/659 (60%), Gaps = 68/659 (10%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
+S +S+ + N+ + + +L+ + + +V++WNS+I+ G EA+ F +
Sbjct: 49 QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQL 108
Query: 65 RKLS-LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
+S + P TFP +K+C L D G++ H AF GF +VFV+++LI MYS+ G
Sbjct: 109 LLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGF 165
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
AR LFD++P R++ SW +M++G +QN NA +AL + E LE
Sbjct: 166 TGIARSLFDDMP--FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG------------ 211
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
IK F + V + +D YA+ G +D +
Sbjct: 212 -------------------------------IKMNFVTVVSILPVFVDMYAKLGLLDSAH 240
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
KVF+ + KD ++WN++I YAQNGLA+EA++V+ M + ++ N T ++L A AH+
Sbjct: 241 KVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHV 300
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G L+ G IH +VIK +L V V T +ID+Y KCG++ A F Q+ +++ +W A+I
Sbjct: 301 GALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAII 360
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
+ +G+H A + L LF +M+ GV+P+++TFVS+LSACSH+G V+EG W + E+ I
Sbjct: 361 SCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG-KWCFRLMQEYGI 419
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
+P ++HYGCMVDLLGRAG L+ AYD I+ M ++ D +WG+LLGACRIH N++LG+ A+
Sbjct: 420 KPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASD 479
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
+LFE++ N GY+VLLSNIYAN G+WE V++ RSL + R L KTPG+S +E+ KV F
Sbjct: 480 RLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFY 539
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
G++ HP+ ++IYE L L K++ +GY+ D + V+ DV+++EKE L HSE+LA
Sbjct: 540 TGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFG 599
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH + IS++ REIVVRDS RFH+FKDG+CSCGDYW
Sbjct: 600 IISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 211/431 (48%), Gaps = 69/431 (16%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K H + G + +F+S+ L+++Y+ G++S +R FD+IPQ +++ +W SM++ Y
Sbjct: 35 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQ--KDVYAWNSMISAY 92
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
V N + EA+ F + LL SE + D VL AC + V+G H
Sbjct: 93 VHNGHFHEAIGCFYQLLL-------VSE----IRPDFYTFPPVLKACGTL-VDG--RKIH 138
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+ K GF V V +LI Y+R G ++R +FD M +D +WN++I+ QNG AA
Sbjct: 139 CWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAA 198
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+ALDV D+M + +K N VT+ ++L
Sbjct: 199 QALDVLDEM-RLEGIKMNFVTVVSIL-------------------------------PVF 226
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK--AGVRP 389
+DMY K G +D A K F + K+V SW +I GY + A EA+++ YKM++ + P
Sbjct: 227 VDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEV-YKMMEECKEIIP 285
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGH--EFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
N T+VS+L A +H G +Q+G + G + N+ V C++D+ G+ G+L +A
Sbjct: 286 NQGTWVSILPAYAHVGALQQG---MKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAM 342
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVD-----LGEIAAKKLFELEPNNCGYHVLLSNI 502
L + ++ V W +++ IH + + GE+ + ++P++ + LLS
Sbjct: 343 SLFYQVPQESS-VTWNAIISCHGIHGHAEKTLKLFGEMLDEG---VKPDHVTFVSLLSAC 398
Query: 503 ----YANAGRW 509
+ G+W
Sbjct: 399 SHSGFVEEGKW 409
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/630 (42%), Positives = 387/630 (61%), Gaps = 34/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + ++ SWN+V+A A+ G + A++ M++ P T + + + L L G
Sbjct: 203 MPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIG 262
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H AF GF V V++A++D Y KCG + AR +F + R N+VSW +M+ GY
Sbjct: 263 RSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSR--NVVSWNTMIDGYA 320
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN + EA F + L E E +V++ L AC+ + H
Sbjct: 321 QNGESEEAFATFLKMLDEGVE------------PTNVSMMGALHACANLGDLERGRYVHR 368
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ ++ +V V N+LI Y++ VD++ VF + K VTWN++I YAQNG E
Sbjct: 369 LLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNE 428
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL++F +M +S D+K ++ TL +V+ A+A L V R K IH I+ ++++V V T++I
Sbjct: 429 ALNLFCEM-QSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALI 487
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
D + KCG + ARK F+ M+E++V +W AMI GYG + REALDLF +M V+PN I
Sbjct: 488 DTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEI 547
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+SV++ACSH+GLV+EG ++ +M + +EP ++HYG MVDLLGRAG+L +A+ I+
Sbjct: 548 TFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQD 607
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M VK V G++LGACRIHKNV+LGE A +LF+L+P++ GYHVLL+N+YA+A W+ V
Sbjct: 608 MPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKV 667
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R R+ M+ + + KTPG SLVELR +VH F G HPQ ++IY YLE L +++ GYV
Sbjct: 668 ARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYV 727
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D T+ IHDV+++ KE L HSE+LA NLRVCGDCH + I
Sbjct: 728 PD-TNSIHDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYI 786
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S V REI+VRD +RFH+FK+G+CSCGDYW
Sbjct: 787 SLVTGREIIVRDLRRFHHFKNGICSCGDYW 816
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 152/544 (27%), Positives = 261/544 (47%), Gaps = 66/544 (12%)
Query: 17 DKHSTNTNLTTLFNKY---VDKNNVFS---------WNSVIADLARGGDSVEALRAFSSM 64
++H T L +LF K+ + VF +++++ A+ +A+R + M
Sbjct: 74 NEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERM 133
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
R + P F ++ DL G++ H GF ++F +A++++Y+KC ++
Sbjct: 134 RCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQI 193
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
DA K+F+ +PQ R++VSW +++ GY QN AR A+ + +L+ E G
Sbjct: 194 EDAYKMFERMPQ--RDLVSWNTVVAGYAQNGFARRAV----QVVLQMQEAGQKP------ 241
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
DS+ + SVL A + + + HG+ + GF+ V V ++D Y + G V +R
Sbjct: 242 --DSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARL 299
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VF GM ++ V+WN++I YAQNG + EA F +M+ V+ V++ L A A+LG
Sbjct: 300 VFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDE-GVEPTNVSMMGALHACANLG 358
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L G+ +H + + + V V S+I MY KC +VD+A F +K K V +W AMI
Sbjct: 359 DLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMIL 418
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
GY + EAL+LF +M ++P+ T VSV++A + + ++ W++ + ++
Sbjct: 419 GYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQA-KWIHGLAIRTLMD 477
Query: 425 PGV--------EHYGC-----------------------MVDLLGRAGKLKEAYDLIEGM 453
V H C M+D G G +EA DL M
Sbjct: 478 KNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEM 537
Query: 454 K---VKADFVVWGSLLGACRIHKNVDLGEI---AAKKLFELEPNNCGYHVLLSNIYANAG 507
+ VK + + + S++ AC V+ G + K+ + LEP Y ++ ++ AG
Sbjct: 538 QNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMV-DLLGRAG 596
Query: 508 RWED 511
R +D
Sbjct: 597 RLDD 600
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 130/258 (50%), Gaps = 11/258 (4%)
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+IK GF +E LI + + + + +VF+ + K V +++++ YA+N +
Sbjct: 66 LIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRD 125
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+ +++M + +V + +L LR G+ IH VI + ++ T+++
Sbjct: 126 AVRFYERM-RCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVV 184
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
++Y KC Q++ A K F +M ++++ SW ++AGY + AR A+ + +M +AG +P+ I
Sbjct: 185 NLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSI 244
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYD 448
T VSVL A + ++ G H + G E+ M+D + G ++ A
Sbjct: 245 TLVSVLPAVADLKALRIGRSI-----HGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARL 299
Query: 449 LIEGMKVKADFVVWGSLL 466
+ +GM + + V W +++
Sbjct: 300 VFKGMSSR-NVVSWNTMI 316
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/600 (43%), Positives = 375/600 (62%), Gaps = 38/600 (6%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M +L + P TFP IK+CS L G + HQ FG+ VF+S++LI MY KC +
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+R++FDE+P + N VSW++++ +Q+D +E LF++ L E S
Sbjct: 61 YELSRQVFDEMPDK--NAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSR---------- 108
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ ++L+A + V + + + V++ G D + V + +AR G V+V+R
Sbjct: 109 -----PSRGAILNAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVAR 163
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
K+FDG++ KD VTW + I Y + + EAL + QM+ + +A+TL V+ A + L
Sbjct: 164 KLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQ-GIFPDAITLLGVIRACSTL 222
Query: 304 GVLRLGKCIHDQVIKMDLEESVI-VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
+L +H + ++ V T++ID+Y KCG + ARK F+ M+E+N+ +W+AM
Sbjct: 223 ASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAM 282
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
I+GYGMH REAL+LF +M KA V+P++ITFVS+LSACSH+GLV EGW N+M +F
Sbjct: 283 ISGYGMHGWGREALNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFG 341
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
+ P EHY CMVD+LGRAGKL EA D IE M V+ + VWG+LLGACRIH NVDL E+ A
Sbjct: 342 VTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVA 401
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
+ LF+L+P+N G +V+L NIY G+ ++ + R+LMKNR + K G+S++E++ K++AF
Sbjct: 402 RALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAF 461
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
+ GD+ HPQ + IY LE L ++++ GY D+ V+HDVD+E KE L +HSEKLA
Sbjct: 462 VAGDRSHPQTDLIYSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVF 521
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCHT + ISKV REIVVRD+ RFH+FK+G CSC DYW
Sbjct: 522 GLLNLGPGSVIRIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 178/368 (48%), Gaps = 28/368 (7%)
Query: 6 SSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR 65
S+S+ ++ DK+ + + F++ DKN V SW+++I + E F M
Sbjct: 48 SNSLITMYGKCDKYELSRQV---FDEMPDKNAV-SWSAIIGACLQDDRCKEGFSLFRQML 103
Query: 66 KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
P+R A+ +C H+ ++ G D V SA M+++CG +
Sbjct: 104 SEGSRPSRGAILNAM-ACVRSHE--EADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVE 160
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
ARKLFD I +++V+W + + YV+ D EAL L K+ +L+ +F
Sbjct: 161 VARKLFDGIMS--KDLVTWATTIEAYVKADMPLEALGLLKQMMLQ------------GIF 206
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF--DSEVGVGNTLIDAYARGGHVDVSR 243
D++ + V+ ACS + + HG +I GF + + V LID Y + G + +R
Sbjct: 207 PDAITLLGVIRACSTLASFQLAHIVHG-IITTGFFYNQLLAVETALIDLYVKCGSLTYAR 265
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
KVFDGM E++ +TW+++I+ Y +G EAL++FDQM S VK + +T ++L A +H
Sbjct: 266 KVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQMKAS--VKPDHITFVSILSACSHS 323
Query: 304 GVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTA 361
G++ G +C + + ++D+ + G++D A +M N W A
Sbjct: 324 GLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGA 383
Query: 362 MIAGYGMH 369
++ +H
Sbjct: 384 LLGACRIH 391
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/627 (41%), Positives = 385/627 (61%), Gaps = 33/627 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SWN++I+ + G+ EALR M+ + T + C+ +D+ G H
Sbjct: 212 DVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVH 271
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G DVFVS+ALI+MYSK G L DA+++FD + +R++VSW S++ Y QND+
Sbjct: 272 LYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGM--EVRDLVSWNSIIAAYEQNDD 329
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
AL FKE L + D + + S+ S +++ + HGFV++
Sbjct: 330 PVTALGFFKEMLFV------------GMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVR 377
Query: 217 -RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
R + ++ +GN L++ YA+ G +D +R VF+ + +D ++WN++I YAQNGLA+EA+D
Sbjct: 378 CRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAID 437
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
++ M + + N T ++L A +H+G L+ G IH ++IK L V V T +IDMY
Sbjct: 438 AYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMY 497
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG+++ A F ++ ++ W A+I+ G+H +AL LF M GV+ ++ITFV
Sbjct: 498 GKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFV 557
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
S+LSACSH+GLV E +TM E+ I+P ++HYGCMVDL GRAG L++AY+L+ M +
Sbjct: 558 SLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPI 617
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
+AD +WG+LL ACRIH N +LG A+ +L E++ N GY+VLLSNIYAN G+WE +
Sbjct: 618 QADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKV 677
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
RSL ++R L KTPG+S V + V F G++ HPQ +IYE L LN K++ +GYV D
Sbjct: 678 RSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVPDY 737
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
+ V+ DV+++EKE L HSE+LA NLRVCGDCH + ISK+
Sbjct: 738 SFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYISKI 797
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
+REI+VRDS RFH+FKDG+CSCGDYW
Sbjct: 798 TEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 265/480 (55%), Gaps = 35/480 (7%)
Query: 3 LSKSSSVSSVVSNVDKHST--NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
L K+ V + V ++T + +L++ K++ + N+FSWNS+++ R G +++
Sbjct: 77 LGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDC 136
Query: 61 FSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
+ + LS + P TFP +K+C +L D G++ H GF DV+V+++LI +YS
Sbjct: 137 VTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEHDVYVAASLIHLYS 193
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
+ G + A K+F ++P +R++ SW +M++G+ QN N EAL + EE
Sbjct: 194 RFGAVEVAHKVFVDMP--VRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEE-------- 243
Query: 180 NSDNVFVDSVAIASVLSACSRV--TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
V +D+V ++S+L C++ V GV H +VIK G +S+V V N LI+ Y++ G
Sbjct: 244 ----VKMDTVTVSSMLPICAQSNDVVGGVL--VHLYVIKHGLESDVFVSNALINMYSKFG 297
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
+ +++VFDGM +D V+WNSIIA Y QN AL F +M+ ++ + +T+ ++
Sbjct: 298 RLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEML-FVGMRPDLLTVVSLA 356
Query: 298 LAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L R+G+ +H V++ LE +++G ++++MY K G +D AR F Q+ ++V
Sbjct: 357 SIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDV 416
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAG--VRPNYITFVSVLSACSHAGLVQEGWHWL 414
SW +I GY + A EA+D Y M++ G + PN T+VS+L A SH G +Q+G +
Sbjct: 417 ISWNTLITGYAQNGLASEAIDA-YNMMEEGRTIVPNQGTWVSILPAYSHVGALQQG---M 472
Query: 415 NTMGHEFN--IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G + V C++D+ G+ G+L++A L + + V W +++ + IH
Sbjct: 473 KIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETS-VPWNAIISSLGIH 531
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 178/324 (54%), Gaps = 20/324 (6%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
F +SC+ +++ KQ H + G +DV + + L+ +Y+ G+LS + F I
Sbjct: 54 FNLVFRSCT---NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHI- 109
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
QR +NI SW SM++ YV+ R+++ E L + V D VL
Sbjct: 110 QR-KNIFSWNSMVSAYVRRGRYRDSMDCVTELL-----------SLSGVRPDFYTFPPVL 157
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
AC + +G E H +V+K GF+ +V V +LI Y+R G V+V+ KVF M +D
Sbjct: 158 KACLSLA-DG--EKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVG 214
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+WN++I+ + QNG AEAL V D+M K+ +VK + VT+S++L A + G +H
Sbjct: 215 SWNAMISGFCQNGNVAEALRVLDRM-KTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLY 273
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
VIK LE V V ++I+MY K G++ A++ F+ M+ +++ SW ++IA Y + A
Sbjct: 274 VIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTA 333
Query: 376 LDLFYKMIKAGVRPNYITFVSVLS 399
L F +M+ G+RP+ +T VS+ S
Sbjct: 334 LGFFKEMLFVGMRPDLLTVVSLAS 357
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 141/279 (50%), Gaps = 16/279 (5%)
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
V +C+ + V + H ++ G +V + L+ YA G + +S F + K+
Sbjct: 57 VFRSCTNINV---AKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKN 113
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
+WNS+++ Y + G +++D +++ + V+ + T VL A L G+ +H
Sbjct: 114 IFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMH 170
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
V+KM E V V S+I +Y + G V++A K F M ++V SW AMI+G+ +
Sbjct: 171 CWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVA 230
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH---- 429
EAL + +M V+ + +T S+L C+ + V G + H + I+ G+E
Sbjct: 231 EALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGG-----VLVHLYVIKHGLESDVFV 285
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
++++ + G+L++A + +GM+V+ D V W S++ A
Sbjct: 286 SNALINMYSKFGRLQDAQRVFDGMEVR-DLVSWNSIIAA 323
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 269/693 (38%), Positives = 402/693 (58%), Gaps = 66/693 (9%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLT----TLFNKYVDKNNVFSWNSVIADLARGGDSVEAL 58
L S S++S + +N NL +FN +W S+I G + +L
Sbjct: 32 LRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSL 91
Query: 59 RAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMY 118
F M P + FP +KSC+ + DL G+ H G D++ +AL++MY
Sbjct: 92 SFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMY 151
Query: 119 SKC---------------GELSDA--------------RKLFDEIPQRIRNIVSWTSMLT 149
SK G+ SD RK+F+ +P+ R+IVSW ++++
Sbjct: 152 SKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPK--RDIVSWNTVIS 209
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
G QN +AL++ +E G A ++ DS ++SVL + +
Sbjct: 210 GNAQNGMHEDALMMVREM-------GNA-----DLRPDSFTLSSVLPIFAEYVNLLKGKE 257
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG+ I+ G+D++V +G++LID YA+ VD S +VF + + D ++WNSIIA QNG+
Sbjct: 258 IHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGM 317
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
E L F QM+ + +K N V+ S+++ A AHL L LGK +H +I+ + +V + +
Sbjct: 318 FDEGLKFFQQMLIA-KIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIAS 376
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+++DMY KCG + AR F++M+ ++ SWTAMI GY +H A +A+ LF +M GV+P
Sbjct: 377 ALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKP 436
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
NY+ F++VL+ACSHAGLV E W + N+M ++ I PG+EHY + DLLGR G+L+EAY+
Sbjct: 437 NYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEF 496
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I M ++ VW +LL ACR+HKN++L E +KKLF ++P N G +VLLSNIY+ AGRW
Sbjct: 497 ISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRW 556
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
+D + R M+++ + K P S +E++ KVHAF+ GDK HP +++I E L+ L +++
Sbjct: 557 KDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMERE 616
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GYV D T V+HDV++E+K L HSE+LA NLRVC DCHT
Sbjct: 617 GYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTAT 676
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ ISK+V REIVVRD+ RFH+FKDG CSCGD+W
Sbjct: 677 KFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 270/639 (42%), Positives = 395/639 (61%), Gaps = 40/639 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT---PTRSTFPCAIKSCS 84
+F+K + + N+F WN++++ R +A+ FS + +S+T P T PC IK+C+
Sbjct: 163 VFDK-LRRKNLFQWNAIVSAYTRNELFEDAMSIFSEL--ISVTEHKPDNFTLPCVIKACA 219
Query: 85 ALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA-RKLFDEIPQRIRNIVS 143
L DL G+ H A DVFV +ALI MY KCG + +A +++FD + + + S
Sbjct: 220 GLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTK--TVSS 277
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W ++L GY QN + R+AL L+ L+ ++ G + D I S+L ACSR+
Sbjct: 278 WNALLCGYAQNSDPRKALDLY----LQMTDSG--------LDPDWFTIGSLLLACSRMKS 325
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
E HGF ++ G + +G +L+ Y G ++ +FDGM + V+WN +IA
Sbjct: 326 LHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAG 385
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y+QNGL EA+++F QM+ S ++ + + V A + L LRLGK +H +K L E
Sbjct: 386 YSQNGLPDEAINLFRQML-SDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTE 444
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ V +SIIDMY K G + L+++ F++++EK+V SW +IAGYG+H R +EAL+LF KM+
Sbjct: 445 DIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKML 504
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ G++P+ TF +L ACSHAGLV++G + N M + NIEP +EHY C+VD+LGRAG++
Sbjct: 505 RLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRI 564
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
+A LIE M D +W SLL +CRIH N+ LGE A KL ELEP +VL+SN++
Sbjct: 565 DDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLF 624
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A +G+W+DV R R MK+ L K G S +E+ GKVH FL+GD+ P+ E++ E L
Sbjct: 625 AGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLE 684
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
VK+ +GY D SV+HD+++E+K LR HSEKLA NLR+CG
Sbjct: 685 VKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICG 744
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH + ISKVV+R+IVVRD+KRFH+F+DG+CSCGDYW
Sbjct: 745 DCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 204/395 (51%), Gaps = 18/395 (4%)
Query: 80 IKSCSALHDLHSGKQAHQQ-AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
+++C D+ G++ H+ + F D +++ +I MYS CG SD+R +FD++ R
Sbjct: 112 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL--RR 169
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
+N+ W ++++ Y +N+ +A+ +F E + +E+ D+ + V+ AC
Sbjct: 170 KNLFQWNAIVSAYTRNELFEDAMSIFSELI-------SVTEHKP----DNFTLPCVIKAC 218
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS-RKVFDGMIEKDAVTW 257
+ + G+ + HG K S+V VGN LI Y + G V+ + ++VFD M K +W
Sbjct: 219 AGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSW 278
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N+++ YAQN +ALD++ QM S + + T+ ++LLA + + L G+ IH +
Sbjct: 279 NALLCGYAQNSDPRKALDLYLQMTDS-GLDPDWFTIGSLLLACSRMKSLHYGEEIHGFAL 337
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ L +G S++ +Y CG+ A+ F+ M+ +++ SW MIAGY + EA++
Sbjct: 338 RNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAIN 397
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
LF +M+ G++P I + V ACS ++ G L+ + ++ + ++D+
Sbjct: 398 LFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKE-LHCFALKAHLTEDIFVSSSIIDMY 456
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ G + + + + ++ K D W ++ IH
Sbjct: 457 AKGGCIGLSQRIFDRLREK-DVASWNVIIAGYGIH 490
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 135/256 (52%), Gaps = 19/256 (7%)
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV----AIASVLSACSRVTVNGVTE 208
++ N +EAL +FL ES D+V +DS A+ +L AC + V
Sbjct: 79 ESGNLKEAL----DFLQRES---------DDVVLDSAQRSEAMGVLLQACGQRKDIEVGR 125
Query: 209 GAHGFV-IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H V F ++ + +I Y+ G SR VFD + K+ WN+I++ Y +N
Sbjct: 126 RLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRN 185
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
L +A+ +F +++ T+ K + TL V+ A A L L LG+ IH KMDL V V
Sbjct: 186 ELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFV 245
Query: 328 GTSIIDMYCKCGQVDLA-RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
G ++I MY KCG V+ A ++ F+ M K V SW A++ GY + R+ALDL+ +M +G
Sbjct: 246 GNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSG 305
Query: 387 VRPNYITFVSVLSACS 402
+ P++ T S+L ACS
Sbjct: 306 LDPDWFTIGSLLLACS 321
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/630 (40%), Positives = 391/630 (62%), Gaps = 32/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +F WN++I +R +AL +S+M+ ++P TFP +K+CS L L G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H Q F GF DVFV + LI +Y+KC L AR +F+ +P R IVSWT++++ Y
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN EAL +F + +V D VA+ SVL+A + + H
Sbjct: 199 QNGEPMEALEIFSQM------------RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V+K G + E + +L YA+ G V ++ +FD M + + WN++I+ YA+NG A E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+D+F +M+ + DV+ + +++++ + A A +G L + +++ V + D + V + +++I
Sbjct: 307 AIDMFHEMI-NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DM+ KCG V+ AR F++ +++V W+AMI GYG+H RAREA+ L+ M + GV PN +
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+ +L AC+H+G+V+EGW + N M + I P +HY C++DLLGRAG L +AY++I+
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M V+ VWG+LL AC+ H++V+LGE AA++LF ++P+N G++V LSN+YA A W+ V
Sbjct: 485 MPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRV 544
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R MK + L K G S VE+RG++ AF VGDK HP++E+I +E + +L+E G+V
Sbjct: 545 AEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 604
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
+ + +HD++ EE E TL HSE++A NLR C +CH +LI
Sbjct: 605 ANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLI 664
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+VDREIVVRD+ RFH+FKDG+CSCGDYW
Sbjct: 665 SKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 205/382 (53%), Gaps = 19/382 (4%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H + + G F+ + LI S G+++ AR++FD++P+ I W +++ GY
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPR--PQIFPWNAIIRGYS 95
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+N++ ++ALL++ L V DS +L ACS ++ + H
Sbjct: 96 RNNHFQDALLMYSNMQLAR------------VSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG--MIEKDAVTWNSIIAIYAQNGLA 270
V + GFD++V V N LI YA+ + +R VF+G + E+ V+W +I++ YAQNG
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EAL++F QM K DVK + V L +VL A L L+ G+ IH V+KM LE + S
Sbjct: 204 MEALEIFSQMRK-MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+ MY KCGQV A+ F++MK N+ W AMI+GY + AREA+D+F++MI VRP+
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
I+ S +SAC+ G +++ +G + V ++D+ + G + E L+
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSV-EGARLV 380
Query: 451 EGMKVKADFVVWGSLLGACRIH 472
+ D VVW +++ +H
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLH 402
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 24/240 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K + N+ WN++I+ A+ G + EA+ F M + P + AI +C+ +
Sbjct: 279 LFDK-MKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L + ++ + DVF+SSALIDM++KCG + AR +FD R++V W++M
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD--RDVVVWSAM 395
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + AREA+ L++ E GG N V +L AC+ + V
Sbjct: 396 IVGYGLHGRAREAISLYRAM-----ERGGVHPN-------DVTFLGLLMACNHSGM--VR 441
Query: 208 EGAHGFVIKRGFDSEVGVGNT----LIDAYARGGHVDVSRKVFDGMIEKDAVT-WNSIIA 262
EG F R D ++ +ID R GH+D + +V M + VT W ++++
Sbjct: 442 EGWWFF--NRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 265/635 (41%), Positives = 394/635 (62%), Gaps = 35/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+++ + VF WN++I +R + + + MR + P TFP +K+C+ L
Sbjct: 110 LFDEFCYPD-VFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELL 168
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D H Q +GF DVFV + L+ +Y+KCG + A+ +FD + R IVSWTS+
Sbjct: 169 DFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHR--TIVSWTSI 226
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY QN A EAL +F + ++ V D +A+ S+L A + V
Sbjct: 227 ISGYAQNGKAVEALRMFSQM------------RNNGVKPDWIALVSILRAYTDVDDLEQG 274
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
HGFVIK G + E + +L YA+ G V V++ FD M + + WN++I+ YA+N
Sbjct: 275 RSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKN 334
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A EA+++F M+ S ++K ++VT+ + +LA A +G L L + + D V K + + V
Sbjct: 335 GHAEEAVNLFHYMI-SRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFV 393
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
TS+IDMY KCG V+ AR+ F++ +K+V W+AMI GYG+H + EA++L++ M +AGV
Sbjct: 394 NTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGV 453
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
PN +TF+ +L+AC+H+GLV+EGW + M +F I P EHY C+VDLLGRAG L EA
Sbjct: 454 FPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEAC 512
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I + ++ VWG+LL AC+I++ V LGE AA KLF L+P N G++V LSN+YA++
Sbjct: 513 AFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSC 572
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
W+ V R LM+ + L K G+S++E+ GK+ AF VGDK HP ++I++ L+ L +L+
Sbjct: 573 LWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLK 632
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
EVG+V SV+HD++ EEKE L HSE++A NLR C +CH+
Sbjct: 633 EVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHS 692
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+LISK+V+REI+VRD+ RFH+FKDGLCSCGDYW
Sbjct: 693 AIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 199/379 (52%), Gaps = 17/379 (4%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H + I G + F+ + L++ S G++ ARKLFDE ++ W +++ Y +
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCY--PDVFMWNAIIRSYSR 131
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N+ R+ + +++ V D VL AC+ + G++ HG
Sbjct: 132 NNMYRDTVEMYRWM------------RWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQ 179
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+IK GF S+V V N L+ YA+ GH+ V++ VFDG+ + V+W SII+ YAQNG A EA
Sbjct: 180 IIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEA 239
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L +F QM ++ VK + + L ++L A + L G+ IH VIKM LE+ + S+
Sbjct: 240 LRMFSQM-RNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTA 298
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
Y KCG V +A+ F+QMK NV W AMI+GY + A EA++LF+ MI ++P+ +T
Sbjct: 299 FYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVT 358
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
S + A + G ++ W++ + N + ++D+ + G ++ A + +
Sbjct: 359 VRSAVLASAQVGSLELA-QWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRN 417
Query: 454 KVKADFVVWGSLLGACRIH 472
K D V+W +++ +H
Sbjct: 418 SDK-DVVMWSAMIMGYGLH 435
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/662 (38%), Positives = 389/662 (58%), Gaps = 64/662 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ WN++ A D V AL+ + M L L P TFP +KSC+ G
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEG 153
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR--------------- 137
+Q H G+ D+FV ++LI +Y + G L DARK+FD P R
Sbjct: 154 QQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASR 213
Query: 138 --------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
++++VSW +M++GY + N +EAL LFKE + N
Sbjct: 214 GYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMM------------KTN 261
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ D + +V+SAC++ + H ++ GF S + + N+L+D Y++ G ++ +
Sbjct: 262 IRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETAC 321
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+F+G++ KD ++WN++I Y L EAL +F +M++S + + N VT+ ++L A AHL
Sbjct: 322 GLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-RPNDVTMLSILPACAHL 380
Query: 304 GVLRLGKCIH---DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
G + +G+ IH D+ +K S + TS+IDMY KCG ++ A + FN + K++ SW
Sbjct: 381 GAIDIGRWIHVYIDKRLKSATNASSL-RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
AMI G+ MH RA A D+F +M K G+ P+ ITFV +LSACS +G++ G H TM +
Sbjct: 440 AMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQD 499
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
+ I P +EHYGCM+DLLG +G KEA ++I M+++ D V+W SLL AC+I NV+LGE
Sbjct: 500 YKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGES 559
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
A+ L ++EP N G +VLLSNIYA AGRW +V + R+L+ ++ + K PG S +E+ VH
Sbjct: 560 FAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVH 619
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA- 599
F++GDK HP++ +IY LEE+ V L++ G+V D + V+ ++++E KE LR HSEKLA
Sbjct: 620 EFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 679
Query: 600 -----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
NLRVC +CH +LISK+ REI+ RD RFH+F+DG+CSC D
Sbjct: 680 AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCND 739
Query: 643 YW 644
YW
Sbjct: 740 YW 741
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 113/253 (44%), Gaps = 17/253 (6%)
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F + S+D +++ L + + L+ + IH Q+IK L + + ++++
Sbjct: 17 FHFLPSSSDPPYDSLRNHPSLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCV 76
Query: 337 KCGQVD---LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
D A F ++E N+ W M G+ + AL L+ MI G+ PN T
Sbjct: 77 ISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYT 136
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY--GCMVDLLGRAGKLKEAYDLIE 451
F +L +C+ + +EG GH + ++ + ++ + + G+L++A + +
Sbjct: 137 FPFLLKSCAKSKAFKEGQQ---IHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFD 193
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP--NNCGYHVLLSNIYANAGRW 509
+ D V + +L+ ++ +A+KLF+ P + ++ ++S YA G +
Sbjct: 194 RSPHR-DVVSYTALIKGYASRGYIE----SAQKLFDEIPVKDVVSWNAMISG-YAETGNY 247
Query: 510 -EDVERTRSLMKN 521
E +E + +MK
Sbjct: 248 KEALELFKEMMKT 260
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 258/626 (41%), Positives = 368/626 (58%), Gaps = 51/626 (8%)
Query: 57 ALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
AL ++ MRKL + P +K+CS + GK+ H + G DVFV +AL+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 117 MYSKCGELSDARKLFDEIPQR--------------------IRNIVSWTSMLTGYVQNDN 156
MYS+CG L AR LFD++ +R R+IVSWT+M+ GY++ ++
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
E LF + E NVF + + + S++ +C V + + H ++++
Sbjct: 213 LEEGERLFVRMIEE------------NVFPNDITMLSLIISCGFVGAVQLGKRLHAYILR 260
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
GF + + L+D Y + G + +R +FD M KD +TW ++I+ YAQ A +
Sbjct: 261 NGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQL 320
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F QM + V+ N +T+ ++L A G L +GK H + K +E VI+ T++IDMY
Sbjct: 321 FVQM-RDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYA 379
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG + A++ F++ ++++ +W M+AGYGMH +AL LF +M GV+PN ITF+
Sbjct: 380 KCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIG 439
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
L ACSHAGLV EG M H+F + P VEHYGCMVDLLGRAG L EAY +IE M V
Sbjct: 440 ALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVT 499
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
+ +WG++L AC+IHKN ++GE+AA++L LEP NCGY VL+SNIYA A RW DV R
Sbjct: 500 PNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMR 559
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
+K+ + K PG S +E+ G VH F +GD HP EKI E L E++ KL+E GY+ D +
Sbjct: 560 KAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTS 619
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V+H++D+EEKE L HSEKLA NLR+C DCHTV +L+SK+
Sbjct: 620 VVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIY 679
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
R I+VRD RFH+F++G CSCG YW
Sbjct: 680 KRVIIVRDRNRFHHFREGSCSCGGYW 705
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 176/348 (50%), Gaps = 24/348 (6%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
TLF + + ++ SW ++IA R D E R F M + ++ P T I SC +
Sbjct: 187 TLFYGF-SQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFV 245
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ GK+ H GF + +++AL+DMY KCGE+ AR +FD + + +++++WT+
Sbjct: 246 GAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSM--KNKDVMTWTA 303
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M++ Y Q + A LF + + V + + + S+LS C+ VNG
Sbjct: 304 MISAYAQANCIDYAFQLFVQM------------RDNGVRPNELTMVSLLSLCA---VNGA 348
Query: 207 TEGA---HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ H ++ K+G + +V + LID YA+ G + ++++F I++D TWN ++A
Sbjct: 349 LDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAG 408
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLE 322
Y +G +AL +F +M ++ VK N +T L A +H G++ GK + +++I L
Sbjct: 409 YGMHGYGEKALKLFTEM-ETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLV 467
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
V ++D+ + G +D A K M N+ W AM+A +H
Sbjct: 468 PKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 265/664 (39%), Positives = 386/664 (58%), Gaps = 68/664 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ WN++ A D V AL+ + M L L P TFP +KSC+ L G
Sbjct: 23 IQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEG 82
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD-------------------------- 126
Q H G+ D++V ++LI MY + L D
Sbjct: 83 LQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASR 142
Query: 127 -----ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
AR +FDEIP ++++VSW +M++GYV+ N +EAL LFKE +
Sbjct: 143 GYIESARNMFDEIP--VKDVVSWNAMISGYVETGNYKEALELFKEMM------------K 188
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
NV D + +V+SA +R + H ++ GF S + + N LID Y++ G ++
Sbjct: 189 TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ +F G+ KD ++WN +I Y L EAL +F +M++S + N VT+ ++L A A
Sbjct: 249 ACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESP-NDVTMLSILHACA 307
Query: 302 HLGVLRLGKCIH---DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
HLG + +G+ IH D+ +K + + + TS+IDMY KCG ++ A + FN M K++ +
Sbjct: 308 HLGAIDIGRWIHVYIDKRLK-GVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPA 366
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
W AMI G+ MH RA A D+F +M K ++P+ ITFV +LSACSHAG++ G H +M
Sbjct: 367 WNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMT 426
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
H + I P +EHYGCM+DLLG +G KEA ++I M ++ D V+W SLL AC++H NV+LG
Sbjct: 427 HNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELG 486
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
E A+ LF++EPNN G +VLLSNIYA AGRW +V R R L+ ++ + K PG S +E+
Sbjct: 487 EKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSV 546
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
VH F++GDK HP++ +IY LEE+ V LQE G+V D + V+ ++++E KE LR HSEKL
Sbjct: 547 VHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKL 606
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVC +CH +LISK+ REI+ RD RFH+F+DG+CSC
Sbjct: 607 AIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSC 666
Query: 641 GDYW 644
DYW
Sbjct: 667 NDYW 670
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
A F ++E N+ W M G+ + AL L+ MI G+ PN TF +L +C+
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 404 AGLVQEGWHWLNTMGH 419
+EG L GH
Sbjct: 76 LKASKEG---LQIHGH 88
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 271/661 (40%), Positives = 379/661 (57%), Gaps = 65/661 (9%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ N+ WN+++ LA D V L + M P TFP +KSC+ G+Q
Sbjct: 45 EPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQ 104
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR----------------- 137
H Q G D + ++LI MY++ G L DARK+FD QR
Sbjct: 105 IHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGD 164
Query: 138 ------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
R++VSW +M+TGYV+N EAL LFKE + NV
Sbjct: 165 VRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMM------------RTNVR 212
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFV-IKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
D + SVLSAC++ + H V GF S + + N I Y++ G V+++
Sbjct: 213 PDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASG 272
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
+F+G+ KD V+WN++I Y L EAL +F +M++S + N VT+ +VL A AHLG
Sbjct: 273 LFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESP-NDVTMLSVLPACAHLG 331
Query: 305 VLRLGKCIH---DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+ +G+ IH D+ +K + + TS+IDMY KCG ++ A + FN M K++ SW A
Sbjct: 332 AIDIGRWIHVYIDKRLK-GVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNA 390
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MI G+ MH RA A DLF +M K G+ P+ IT V +LSACSH+GL+ G H ++ ++
Sbjct: 391 MIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDY 450
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
NI P +EHYGCM+DLLG AG KEA ++I M ++ D V+W SLL AC++H N++L E
Sbjct: 451 NITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESF 510
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
A+KL E+EP N G +VLLSNIYA AGRWEDV R R ++ + + K PG S +E+ VH
Sbjct: 511 AQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHE 570
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
F++GDK HPQ +IY LEE++V L+E G+V D + V+ ++++E KE LR HSEKLA
Sbjct: 571 FIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 630
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
NLRVC +CH +LISK+ REIV RD RFH+F+DG+CSC DY
Sbjct: 631 FGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDY 690
Query: 644 W 644
W
Sbjct: 691 W 691
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 169/342 (49%), Gaps = 20/342 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +V SWN++I EAL F M + ++ P T + +C+ + G
Sbjct: 175 ITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELG 234
Query: 93 KQAHQQAFI-FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
++ H GF + + +A I +YSKCG++ A LF+ + +++VSW +++ GY
Sbjct: 235 REIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGL--SCKDVVSWNTLIGGY 292
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+ +EALLLF+E L G S N V + SVL AC+ + + H
Sbjct: 293 THMNLYKEALLLFQEMLR-----SGESPN-------DVTMLSVLPACAHLGAIDIGRWIH 340
Query: 212 GFVIKR--GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
++ KR G + + +LID YA+ G ++ + +VF+ M+ K +WN++I +A +G
Sbjct: 341 VYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGR 400
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVG 328
A A D+F +M K+ ++ + +TL +L A +H G+L LG+ I V + ++ +
Sbjct: 401 ANAAFDLFSRMRKN-GIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHY 459
Query: 329 TSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+ID+ G A + + M E + W +++ MH
Sbjct: 460 GCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMH 501
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 36/293 (12%)
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVD---VSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H ++K G + + L++ H D + VF+ E + + WN+++ A
Sbjct: 1 THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
+ L+++ +MV V NA T +L + A G+ IH QV+K+ E
Sbjct: 61 SSDLVSPLEMYVRMVSXGHVP-NAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRY 119
Query: 327 VGTSIIDMYCKCGQVD-------------------------------LARKAFNQMKEKN 355
TS+I MY + G+++ ARK F+ + E++
Sbjct: 120 AHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERD 179
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
V SW AMI GY +C EAL+LF +M++ VRP+ T VSVLSAC+ +G ++ G
Sbjct: 180 VVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHT 239
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ ++ + L + G ++ A L EG+ K D V W +L+G
Sbjct: 240 LVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCK-DVVSWNTLIGG 291
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 92/214 (42%), Gaps = 11/214 (5%)
Query: 313 HDQVIKMDLEESVIVGTSIIDMYCKCGQVD---LARKAFNQMKEKNVRSWTAMIAGYGMH 369
H Q++K L + + ++++ D A F +E N+ W M+ G
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
L+++ +M+ G PN TF +L +C+ + +EG ++ + E
Sbjct: 62 SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEG-RQIHAQVMKLGCELDRYA 120
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL- 488
+ ++ + R G+L++A + + + D V +L+ +V +A+K+F+
Sbjct: 121 HTSLISMYARNGRLEDARKVFD-XSSQRDVVSCTALITGYASRGDVR----SARKVFDXI 175
Query: 489 -EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKN 521
E + ++ +++ N G E +E + +M+
Sbjct: 176 TERDVVSWNAMITGYVENCGYEEALELFKEMMRT 209
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/630 (40%), Positives = 390/630 (61%), Gaps = 32/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +F WN++I +R +AL +S+M+ ++P TFP +K+CS L L G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H Q F GF DVFV + LI +Y+KC L AR +F+ +P R IVSWT++++ Y
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN EAL +F +V D VA+ SVL+A + + H
Sbjct: 199 QNGEPMEALEIFSHM------------RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V+K G + E + +L YA+ G V ++ +FD M + + WN++I+ YA+NG A E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+D+F +M+ + DV+ + +++++ + A A +G L + +++ V + D + V + +++I
Sbjct: 307 AIDMFHEMI-NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DM+ KCG V+ AR F++ +++V W+AMI GYG+H RAREA+ L+ M + GV PN +
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+ +L AC+H+G+V+EGW + N M + I P +HY C++DLLGRAG L +AY++I+
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNLMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M V+ VWG+LL AC+ H++V+LGE AA++LF ++P+N G++V LSN+YA A W+ V
Sbjct: 485 MPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRV 544
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R MK + L K G S VE+RG++ AF VGDK HP++E+I +E + +L+E G+V
Sbjct: 545 AEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 604
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
+ + +HD++ EE E TL HSE++A NLR C +CH +LI
Sbjct: 605 ANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLI 664
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+VDREIVVRD+ RFH+FKDG+CSCGDYW
Sbjct: 665 SKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 204/382 (53%), Gaps = 19/382 (4%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H + + G F+ + LI S G+++ AR++FD++P+ I W +++ GY
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPR--PQIFPWNAIIRGYS 95
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+N++ ++ALL++ L V DS +L ACS ++ + H
Sbjct: 96 RNNHFQDALLMYSNMQLAR------------VSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG--MIEKDAVTWNSIIAIYAQNGLA 270
V + GFD++V V N LI YA+ + +R VF+G + E+ V+W +I++ YAQNG
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EAL++F M K DVK + V L +VL A L L+ G+ IH V+KM LE + S
Sbjct: 204 MEALEIFSHMRK-MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+ MY KCGQV A+ F++MK N+ W AMI+GY + AREA+D+F++MI VRP+
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
I+ S +SAC+ G +++ +G + V ++D+ + G + E L+
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSV-EGARLV 380
Query: 451 EGMKVKADFVVWGSLLGACRIH 472
+ D VVW +++ +H
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLH 402
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 20/238 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K + N+ WN++I+ A+ G + EA+ F M + P + AI +C+ +
Sbjct: 279 LFDK-MKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L + ++ + DVF+SSALIDM++KCG + AR +FD R++V W++M
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD--RDVVVWSAM 395
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + AREA+ L++ E GG N V +L AC+ + V
Sbjct: 396 IVGYGLHGRAREAISLYRAM-----ERGGVHPN-------DVTFLGLLMACNHSGM--VR 441
Query: 208 EGAHGF--VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT-WNSIIA 262
EG F + + + +ID R GH+D + +V M + VT W ++++
Sbjct: 442 EGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/653 (40%), Positives = 387/653 (59%), Gaps = 34/653 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
S++V+ K S +F+ ++++ V WN++++ L + EA+ F M K +
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGMLERDTVL-WNTMVSGLVKNSCFDEAILIFGDMVKGGI 203
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
+T + + L DL G A GFH +V + L +YSKCGE+ AR
Sbjct: 204 GFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARL 263
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
LF +I Q ++VS+ +M++GY N+ ++ LFKE L+ G NS ++ V
Sbjct: 264 LFGQIGQP--DLVSYNAMISGYTCNNETESSVRLFKELLVS-----GEKVNSSSI----V 312
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
+ V + + T HGF K G S V L Y+R ++ +R +FD
Sbjct: 313 GLIPVFFPFGHLHL---TRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDES 369
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
EK +WN++I+ YAQNGL +A+ +F +M K +V+ N VT++++L A A LG L LG
Sbjct: 370 SEKSLASWNAMISGYAQNGLTEKAISLFQEMQKC-EVRPNPVTVTSILSACAQLGALSLG 428
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K +HD + + E ++ V T++IDMY KCG + A++ F+ M EKN +W AMI+GYG+H
Sbjct: 429 KWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLH 488
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
EAL+LF +M+ + V P +TF+SVL ACSHAGLV+EG +M H+ EP EH
Sbjct: 489 GYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEH 548
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
Y CMVDLLGRAG L +A D I M V+ VWG+LLGAC IHK+ +L +A+ KLFEL+
Sbjct: 549 YACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELD 608
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
P N GY+VLLSNIY+ + + R ++K R+LAKTPG +L+E+ +H F GD+ H
Sbjct: 609 PQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSH 668
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
PQ IY LE+L K++E G+ T+ + +HDV++EEKE+ +++HSEKLA
Sbjct: 669 PQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEP 728
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + ISK+ +R IVVRD+ RFH+FKDG+CSCGDYW
Sbjct: 729 GTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 213/488 (43%), Gaps = 60/488 (12%)
Query: 72 TRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLF 131
TR+ F I S LH L+ Q H Q + G H D+ + L S + A LF
Sbjct: 9 TRNLFLTLINRVSTLHQLN---QTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLF 65
Query: 132 DEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAI 191
IP ++ + ++ + N++ A+ L+ S + D+
Sbjct: 66 STIPNP--DLFLYNVLIRAFSLNNSPSSAVSLYTHL-----------RKSTPLEPDNFTY 112
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
A V+S S + + + I GF S++ VG+ ++ Y + V +RKVFDGM+E
Sbjct: 113 AFVISGASSLGLGLLLHAHS---IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLE 169
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
+D V WN++++ +N EA+ +F MVK + ++ T++AVL +A L L LG
Sbjct: 170 RDTVLWNTMVSGLVKNSCFDEAILIFGDMVKG-GIGFDSTTVAAVLPGVAELQDLALGMG 228
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
I +K+ V T + +Y KCG+++ AR F Q+ + ++ S+ AMI+GY +
Sbjct: 229 IQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNE 288
Query: 372 AREALDLFYKMIKAGVRPNYITFVSV-----------LSACSHAGLVQEGWHW------- 413
++ LF +++ +G + N + V + L+ C H + G
Sbjct: 289 TESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTA 348
Query: 414 LNTMGHEFN------------IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK---VKAD 458
L T+ N E + + M+ + G ++A L + M+ V+ +
Sbjct: 349 LTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPN 408
Query: 459 FVVWGSLLGACRIHKNVDLG----EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
V S+L AC + LG ++ ++ FE +N L ++YA G + +R
Sbjct: 409 PVTVTSILSACAQLGALSLGKWVHDLINRESFE---SNIFVSTALIDMYAKCGSITEAQR 465
Query: 515 TRSLMKNR 522
S+M +
Sbjct: 466 LFSMMPEK 473
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 253/632 (40%), Positives = 381/632 (60%), Gaps = 33/632 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ +D+ + ++N +I EA+ F M + S+ P TFPC +K CS L L
Sbjct: 82 RQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALS 141
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G+Q H GF FV + LI MY+ CGE+ AR++FDE+ +R N+ +W SM G
Sbjct: 142 EGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSER--NVRTWNSMFAG 199
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y ++ N E + LF E L ++ D V + SVL+AC R+ + E
Sbjct: 200 YTKSGNWEEVVKLFHEML------------ELDIRFDEVTLVSVLTACGRLADLELGEWI 247
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
+ +V ++G + +L+D YA+ G VD +R++FD M +D V W+++I+ Y+Q
Sbjct: 248 NRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRC 307
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EALD+F +M K+ ++ N +T+ ++L + A LG L GK +H + K ++ +V +GT+
Sbjct: 308 REALDLFHEMQKA-NIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTA 366
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++D Y KCG V+ + + F +M KNV SWT +I G + + ++AL+ FY M++ V PN
Sbjct: 367 LMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPN 426
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+TF+ VLSACSHAGLV EG +M +F IEP +EHYGCMVD+LGRAG ++EA+ I
Sbjct: 427 DVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFI 486
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
+ M ++ + V+W +LL +C++HKNV++GE + K+L LEP + G ++LLSNIYA+ GRWE
Sbjct: 487 KNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWE 546
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
D + R MK + + KTPG SL+EL G +H F D H Q E+IY +E++ +++ G
Sbjct: 547 DALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAG 606
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
YV + D ++++KE ++ HSEKLA NLRVC DCH +
Sbjct: 607 YVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATK 666
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
L+SKV +REIVVRD RFH+FK+G CSC DYW
Sbjct: 667 LVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+D A F Q+ E + ++ MI G+ + EA+ LF +M + V+P+ TF +L
Sbjct: 74 MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133
Query: 401 CSHAGLVQEG 410
CS + EG
Sbjct: 134 CSRLQALSEG 143
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/635 (42%), Positives = 387/635 (60%), Gaps = 35/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +++ V SWN+++A ++ G + AL SM + +L P+ T + + SAL
Sbjct: 192 VFDRMPERDLV-SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ GK+ H A GF V +S+AL+DMY+KCG L AR+LFD + +R N+VSW SM
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER--NVVSWNSM 308
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ YVQN+N +EA+L+F++ L + V V++ L AC+ +
Sbjct: 309 IDAYVQNENPKEAMLIFQKML------------DEGVKPTDVSVMGALHACADLGDLERG 356
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H ++ G D V V N+LI Y + VD + +F + + V+WN++I +AQN
Sbjct: 357 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN 416
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G +AL+ F QM +S VK + T +V+ AIA L + K IH V++ L+++V V
Sbjct: 417 GRPIDALNYFSQM-RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFV 475
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
T+++DMY KCG + +AR F+ M E++V +W AMI GYG H + AL+LF +M K +
Sbjct: 476 TTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTI 535
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+PN +TF+SV+SACSH+GLV+ G M ++IE ++HYG MVDLLGRAG+L EA+
Sbjct: 536 KPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW 595
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
D I M VK V+G++LGAC+IHKNV+ E AA++LFEL P++ GYHVLL+NIY A
Sbjct: 596 DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAAS 655
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
WE V + R M + L KTPG S+VE++ +VH+F G HP +KIY +LE+L ++
Sbjct: 656 MWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E GYV D T+++ V+ + KE L HSEKLA NLRVC DCH
Sbjct: 716 EAGYVPD-TNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHN 774
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ IS V REIVVRD +RFH+FK+G CSCGDYW
Sbjct: 775 ATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/502 (30%), Positives = 260/502 (51%), Gaps = 39/502 (7%)
Query: 17 DKHSTNTNLTTLFNKY------------VDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
+H T L +LF +Y +D +++++ A+ D +AL+ F M
Sbjct: 67 QEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM 126
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
R + P F +K C +L GK+ H GF D+F + L +MY+KC ++
Sbjct: 127 RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQV 186
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
++ARK+FD +P+ R++VSW +++ GY QN AR AL + K S C +N+
Sbjct: 187 NEARKVFDRMPE--RDLVSWNTIVAGYSQNGMARMALEMVK------SMC------EENL 232
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
+ I SVL A S + + V + HG+ ++ GFDS V + L+D YA+ G ++ +R+
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 292
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
+FDGM+E++ V+WNS+I Y QN EA+ +F +M+ VK V++ L A A LG
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE-GVKPTDVSVMGALHACADLG 351
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L G+ IH +++ L+ +V V S+I MYCKC +VD A F +++ + + SW AMI
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
G+ + R +AL+ F +M V+P+ T+VSV++A + + W++ + ++
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRSCLD 470
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
V +VD+ + G + A LI M + W +++ H G+ AA +
Sbjct: 471 KNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTH---GFGK-AALE 525
Query: 485 LFE------LEPNNCGYHVLLS 500
LFE ++PN + ++S
Sbjct: 526 LFEEMQKGTIKPNGVTFLSVIS 547
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 237/472 (50%), Gaps = 29/472 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++ CS+L +L +Q F G +++ F + L+ ++ + G + +A ++F+ I ++
Sbjct: 44 LERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
V + +ML G+ + + +AL F D+V +L C
Sbjct: 101 --VLYHTMLKGFAKVSDLDKALQFFVRM------------RYDDVEPVVYNFTYLLKVCG 146
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
V + HG ++K GF ++ L + YA+ V+ +RKVFD M E+D V+WN+
Sbjct: 147 DEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNT 206
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
I+A Y+QNG+A AL++ M + ++K + +T+ +VL A++ L ++ +GK IH ++
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEE-NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS 265
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
+ V + T+++DMY KCG ++ AR+ F+ M E+NV SW +MI Y + +EA+ +F
Sbjct: 266 GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
KM+ GV+P ++ + L AC+ G ++ G +++ + E ++ V ++ + +
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCK 384
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSL-LGACRIHKNVD-LGEIAAKKLFELEPNNCGYHV 497
++ A + ++ + V W ++ LG + + +D L + + ++P+ Y
Sbjct: 385 CKEVDTAASMFGKLQSRT-LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVS 443
Query: 498 LLSNI----YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
+++ I + +W RS + T +LV++ K A ++
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT---ALVDMYAKCGAIMIA 492
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 22/253 (8%)
Query: 7 SSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK 66
S V+S++S K ++F K + + SWN++I A+ G ++AL FS MR
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGK-LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
++ P T+ I + + L H K H ++VFV++AL+DMY+KCG +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 491
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
AR +FD + + R++ +W +M+ GY + + AL LF EE + G N
Sbjct: 492 ARLIFDMMSE--RHVTTWNAMIDGYGTHGFGKAALELF-----EEMQKGTIKPN------ 538
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHG--FVIKRGFDSEVGVGN--TLIDAYARGGHVDVS 242
V SV+SACS +G+ E +++K + E+ + + ++D R G ++ +
Sbjct: 539 -GVTFLSVISACSH---SGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594
Query: 243 RKVFDGMIEKDAV 255
M K AV
Sbjct: 595 WDFIMQMPVKPAV 607
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/641 (41%), Positives = 385/641 (60%), Gaps = 33/641 (5%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
NTN + + N+F +N++I L E++ + SMRK L+P TFP +K
Sbjct: 57 NTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLK 116
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI 141
+C+ + D G + H G D FV +LI++Y+KCG + +A K+FD+IP + N
Sbjct: 117 ACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDK--NF 174
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
SWT+ ++GYV REA+ +F+ L E G + DS ++ VLSAC R
Sbjct: 175 ASWTATISGYVGVGKCREAIDMFRRLL----EMG--------LRPDSFSLVEVLSACKRT 222
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSII 261
E ++ + G V V L+D Y + G+++ +R VFDGM+EK+ V+W+S+I
Sbjct: 223 GDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMI 282
Query: 262 AIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL 321
YA NGL EALD+F +M+ + +K + + VL + A LG L LG + + +
Sbjct: 283 QGYASNGLPKEALDLFFKML-NEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEF 341
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK 381
++ ++GT++IDMY KCG++D A + F M++K+ W A I+G M ++AL LF +
Sbjct: 342 LDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQ 401
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
M K+G++P+ TFV +L AC+HAGLV+EG + N+M F + P +EHYGCMVDLLGRAG
Sbjct: 402 MEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAG 461
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSN 501
L EA+ LI+ M ++A+ +VWG+LLG CR+H++ L E+ KKL LEP + G +VLLSN
Sbjct: 462 CLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSN 521
Query: 502 IYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEE 561
IYA + +WE+ + RS+M R + K PG+S +E+ G VH FLVGD HP EKIY L E
Sbjct: 522 IYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGE 581
Query: 562 LNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRV 603
L L+ GYV V+ D+++EEKE + HSEKLA NLRV
Sbjct: 582 LAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRV 641
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CGDCH I+ IS++ REI+VRD+ RFH F DGLCSC DYW
Sbjct: 642 CGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
I L+ K IH ++++ L+E + ++ G + + + +Q KE N+ +
Sbjct: 17 IQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLF 76
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
MI G ++ +E++++++ M K G+ P+ TF VL AC+ L E L H
Sbjct: 77 NTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARV-LDSE----LGVKMH 131
Query: 420 EFNIEPGVEHYG----CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL------GAC 469
++ G E +++L + G + A+ + + + K +F W + + G C
Sbjct: 132 SLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDK-NFASWTATISGYVGVGKC 190
Query: 470 R 470
R
Sbjct: 191 R 191
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 269/635 (42%), Positives = 386/635 (60%), Gaps = 35/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +++ V WN++I+ A+ G + AL M + P T + + +
Sbjct: 87 MFDRMPERDLV-CWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTR 145
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G H GF V VS+AL+DMYSKCG +S AR +FD + R +VSW SM
Sbjct: 146 LLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHR--TVVSWNSM 203
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GYVQ+ +A A+L+F++ L E V +V + L AC+ +
Sbjct: 204 IDGYVQSGDAEGAMLIFQKMLDE------------GVQPTNVTVMGALHACADLGDLERG 251
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H V + DS+V V N+LI Y++ VD++ +F + K V+WN++I YAQN
Sbjct: 252 KFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQN 311
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EAL+ F +M +S ++K ++ T+ +V+ A+A L + R K IH VI+ L+++V V
Sbjct: 312 GCVNEALNAFCEM-QSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFV 370
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
T+++DMY KCG + ARK F+ M ++V +W AMI GYG H + +++LF +M K +
Sbjct: 371 MTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTI 430
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+PN ITF+ LSACSH+GLV+EG + +M ++ IEP ++HYG MVDLLGRAG+L +A+
Sbjct: 431 KPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAW 490
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
D I+ M +K V+G++LGAC+IHKNVDLGE AA ++F+L P++ GYHVLL+NIYA A
Sbjct: 491 DFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATAS 550
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
W V + R++M+ L KTPG SLVE+ +VH+F G HPQ +KIY YLE L +++
Sbjct: 551 MWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIR 610
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV D T+ IHDV+ + K L HSEKLA NLRVCGDCH
Sbjct: 611 AAGYVPD-TNSIHDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHN 669
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ IS V REI+VRD RFH FKDG+CSCGDYW
Sbjct: 670 ATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/449 (31%), Positives = 234/449 (52%), Gaps = 25/449 (5%)
Query: 57 ALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
AL FS M+ S+ P F +K C DL GK+ H GF ++F + +++
Sbjct: 14 ALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVN 73
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY+KC +++DA +FD +P+ R++V W +M++GY QN A+ AL+L +L SE G
Sbjct: 74 MYAKCRQINDAYNMFDRMPE--RDLVCWNTMISGYAQNGFAKVALML----VLRMSEEGH 127
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
DS+ I S+L A + + + HG+V++ GF+S V V L+D Y++
Sbjct: 128 RP--------DSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G V ++R +FDGM + V+WNS+I Y Q+G A A+ +F +M+ V+ VT+
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDE-GVQPTNVTVMGA 238
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A A LG L GK +H V ++ L+ V V S+I MY KC +VD+A F ++ K +
Sbjct: 239 LHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW AMI GY + EAL+ F +M ++P+ T VSV+ A + + ++ W++
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQA-KWIHG 357
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
+ ++ V +VD+ + G + A L + M + + W +++ H
Sbjct: 358 LVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNAR-HVITWNAMIDGYGTH---G 413
Query: 477 LGEIAAKKLFEL-----EPNNCGYHVLLS 500
LG+ + + E+ +PN+ + LS
Sbjct: 414 LGKTSVELFKEMKKGTIKPNDITFLCALS 442
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 25/262 (9%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
+KL SV + + ++ ++ K + + SWN++I A+ G EAL A
Sbjct: 261 LKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNA 320
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F M+ ++ P T I + + L K H ++VFV +AL+DMY+K
Sbjct: 321 FCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAK 380
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG + ARKLFD + R++++W +M+ GY + + ++ LFKE G +
Sbjct: 381 CGAIHTARKLFDMM--NARHVITWNAMIDGYGTHGLGKTSVELFKEMK------KGTIKP 432
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT------LIDAYA 234
+D F+ LSACS +G+ E G + G+ T ++D
Sbjct: 433 NDITFL------CALSACSH---SGLVE--EGLCFFESMKKDYGIEPTMDHYGAMVDLLG 481
Query: 235 RGGHVDVSRKVFDGMIEKDAVT 256
R G ++ + M K +T
Sbjct: 482 RAGRLNQAWDFIQKMPIKPGIT 503
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YA++ AL F +M K V+ + +L L+ GK IH VI
Sbjct: 5 YAKSSSLDSALSFFSRM-KHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSW 63
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
++ T +++MY KC Q++ A F++M E+++ W MI+GY + A+ AL L +M
Sbjct: 64 NLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMS 123
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGR 439
+ G RP+ IT VS+L A + L++ G H + + G E +VD+ +
Sbjct: 124 EEGHRPDSITIVSILPAVADTRLLRIG-----MAVHGYVLRAGFESLVNVSTALVDMYSK 178
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLL 466
G + A + +GM + V W S++
Sbjct: 179 CGSVSIARVIFDGMDHRT-VVSWNSMI 204
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 260/627 (41%), Positives = 377/627 (60%), Gaps = 33/627 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ +WN++I+ G EAL F MR S++ T + C L D+ SG H
Sbjct: 204 DIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIH 263
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A G D+FV +ALI+MY+K GEL A +F+++ ++R+IVSW S+L + QN
Sbjct: 264 VYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQM--KVRDIVSWNSLLAAFEQNKK 321
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
AL ++ + +S V D + + S+ S + + + HGFV +
Sbjct: 322 PVIALGVYNKM------------HSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTR 369
Query: 217 R-GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
R F ++ +GN +ID YA+ G +D +RKVF+G+ KD ++WNS+I Y+QNGLA EA+D
Sbjct: 370 RCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAID 429
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
V+ M + N T ++L A + LG L+ G H Q+IK L + V T ++DMY
Sbjct: 430 VYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMY 489
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG++ A F ++ ++ SW A+I+ +G+H +A+ LF +M GV+P++ITFV
Sbjct: 490 GKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFV 549
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
S+LSACSH+GLV EG M + I P ++HYGCMVDL GRAG L++A++ ++ M V
Sbjct: 550 SLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPV 609
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
+ D VWG+LLGACRIH+NV+L + L ++E N GY+VLLSNIYA G WE V+
Sbjct: 610 RPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEV 669
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
RSL ++R L KTPG+S +E+ K+ F G++ HP+ E+IY L L K++ +GYV D
Sbjct: 670 RSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDY 729
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
V+ DV+ +EKE L HSE+LA NLRVCGDCH + ISK+
Sbjct: 730 NFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKI 789
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
+REI+VRDS RFH+FKDG+CSCGDYW
Sbjct: 790 TEREIIVRDSNRFHHFKDGVCSCGDYW 816
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 148/479 (30%), Positives = 247/479 (51%), Gaps = 37/479 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHS 91
+ +V++WNS+I+ AR G A+ F+ S L TFP I++C L D
Sbjct: 101 IQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD--- 157
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G++ H GF DV+++++ I YS+ G +S A LFD + IR+I +W +M++G+
Sbjct: 158 GRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNM--MIRDIGTWNAMISGF 215
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA- 210
N EAL +F E + +V +DSV I+S+L C V ++ + G
Sbjct: 216 YLNGKVAEALEVFDEMRFK------------SVSMDSVTISSLLPIC--VQLDDIISGVL 261
Query: 211 -HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
H + IK G + ++ V N LI+ YA+ G + + +F+ M +D V+WNS++A + QN
Sbjct: 262 IHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKK 321
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEESVIVG 328
AL V+++M S V + +TL ++ A LG + IH V + + +G
Sbjct: 322 PVIALGVYNKM-HSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALG 380
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM-IKAGV 387
+IIDMY K G +D ARK F + K+V SW ++I GY + A EA+D++ M +G
Sbjct: 381 NAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGA 440
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
PN T+VS+L+A S G +++G + F + + C+VD+ G+ GKL +A
Sbjct: 441 VPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNF-LYFDIFVSTCLVDMYGKCGKLADAL 499
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLS 500
L + ++ V W +++ +H + A KLF+ ++P++ + LLS
Sbjct: 500 SLFYEVPHQSS-VSWNAIISCHGLHGY----GLKAVKLFKEMQSEGVKPDHITFVSLLS 553
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 199/382 (52%), Gaps = 26/382 (6%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
+H KQ H + G + +F+S+ LI+ Y+ G++ AR FD+I + +++ +W SM+
Sbjct: 56 VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQI--QTKDVYTWNSMI 113
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
+ Y + + A+ F EFL ++ + D V+ AC + +G
Sbjct: 114 SAYARIGHFHAAVDCFNEFL-----------STSFLQSDHYTFPPVIRACGNLD-DG--R 159
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H V+K GF+ +V + + I Y+R G V ++ +FD M+ +D TWN++I+ + NG
Sbjct: 160 KVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNG 219
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
AEAL+VFD+M + V ++VT+S++L L + G IH IK+ LE + V
Sbjct: 220 KVAEALEVFDEM-RFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVC 278
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
++I+MY K G++ A FNQMK +++ SW +++A + + + AL ++ KM GV
Sbjct: 279 NALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVV 338
Query: 389 PNYITFVSVLSACSHAG--LVQEGWHWLNTMGHEF--NIEPGVEHYGCMVDLLGRAGKLK 444
P+ +T VS+ S + G L H T F +I G ++D+ + G +
Sbjct: 339 PDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALG----NAIIDMYAKLGFID 394
Query: 445 EAYDLIEGMKVKADFVVWGSLL 466
A + EG+ VK D + W SL+
Sbjct: 395 SARKVFEGLPVK-DVISWNSLI 415
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/632 (40%), Positives = 377/632 (59%), Gaps = 37/632 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ NV WN ++ + G+ E+ F M+ L P + T+P +++C++L L G
Sbjct: 375 TETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLG 434
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR--NIVSWTSMLTG 150
+Q H Q GF +V+V S LIDMY+K GEL AR + QR+R ++VSWT+M+ G
Sbjct: 435 EQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGIL----QRLREEDVVSWTAMIAG 490
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y Q+D EAL LF+E + + D++ +S +SAC+ + +
Sbjct: 491 YTQHDLFAEALKLFQEM------------ENQGIRSDNIGFSSAISACAGIQALNQGQQI 538
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H G+ ++ +GN L+ YAR G + F+ + KD ++WN++I+ +AQ+G
Sbjct: 539 HAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHC 598
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EAL VF QM V+ N T + + A A+ ++ GK IH +IK +
Sbjct: 599 EEALQVFSQM-NQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNV 657
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+I +Y KCG ++ A++ F +M EKNV SW AMI GY H EA+ LF +M + G+ PN
Sbjct: 658 LITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPN 717
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
++TFV VLSACSH GLV EG + +M E + P EHY C+VDLLGRA L A + I
Sbjct: 718 HVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFI 777
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
E M ++ D ++W +LL AC +HKN+++GE AA+ L ELEP + +VLLSN+YA +G+W+
Sbjct: 778 EEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWD 837
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
+RTR +MK+R + K PG S +E++ +HAF VGD+ HP E+IYEY+++LN + E+G
Sbjct: 838 YRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIG 897
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
YV D ++++DV+QE+K+ T IHSEKLA NLRVC DCH I+
Sbjct: 898 YVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIK 957
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+SK+ +R IVVRD+ RFH+F+ G+CSC DYW
Sbjct: 958 FVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 244/478 (51%), Gaps = 34/478 (7%)
Query: 19 HSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC 78
H N LF+ + +NV WN VI+ L + + L FS M ++TP STF
Sbjct: 58 HGEVDNAIKLFDD-IPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFAS 116
Query: 79 AIKSCSA-LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
+++CS +Q H + GF V + LID+YSK G + A+ +F+ +
Sbjct: 117 VLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERL--F 174
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+++ VSW +M++G QN EA+LLF + + V +SVLSA
Sbjct: 175 LKDSVSWVAMISGLSQNGREDEAILLFCQM------------HKSAVIPTPYVFSSVLSA 222
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C+++ + + E HGF++K G SE V N L+ Y+R G++ + ++F M +D +++
Sbjct: 223 CTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISY 282
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
NS+I+ AQ G + AL +F++M + +K + VT++++L A A +G GK +H VI
Sbjct: 283 NSLISGLAQRGFSDRALQLFEKM-QLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVI 341
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
KM + +I+ S++D+Y KC ++ A + F + +NV W M+ YG E+
Sbjct: 342 KMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYW 401
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM----GHEFNIEPGVEHYGC- 432
+F +M G+ PN T+ S+L C+ G + G ++T G +FN+ Y C
Sbjct: 402 IFLQMQIEGLMPNQYTYPSILRTCTSLGALDLG-EQIHTQVIKSGFQFNV------YVCS 454
Query: 433 -MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
++D+ + G+L A +++ ++ + D V W +++ H DL A K E+E
Sbjct: 455 VLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQH---DLFAEALKLFQEME 508
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/555 (26%), Positives = 255/555 (45%), Gaps = 71/555 (12%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M + + T+ + C L K+ H + F GF + + S LID+Y GE
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ +A KLFD+IP N+ W +++G + A + L LF + E N
Sbjct: 61 VDNAIKLFDDIPS--SNVSFWNKVISGLLAKKLASQVLGLFSLMITE------------N 106
Query: 184 VFVDSVAIASVLSACSRVTVN-GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
V D ASVL ACS VTE H +I GF S V N LID Y++ GHVD++
Sbjct: 107 VTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLA 166
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
+ VF+ + KD+V+W ++I+ +QNG EA+ +F QM KS + V S+VL A
Sbjct: 167 KLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYV-FSSVLSACTK 225
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
+ + +LG+ +H ++K L V +++ +Y + G + A + F++M ++ S+ ++
Sbjct: 226 IELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSL 285
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH---WLNTMGH 419
I+G + AL LF KM ++P+ +T S+LSAC+ G +G ++ MG
Sbjct: 286 ISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGM 345
Query: 420 E----------------FNIEPGVEHY-----------GCMVDLLGRAGKLKEAYDLIEG 452
F+IE E++ M+ G+ G L E+Y +
Sbjct: 346 SSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQ 405
Query: 453 MKVKA---DFVVWGSLLGACRIHKNVDLGE----IAAKKLFELEPNNCGYHVLLSNIYAN 505
M+++ + + S+L C +DLGE K F+ C +L ++YA
Sbjct: 406 MQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCS---VLIDMYAK 462
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH---PQHEKIYEYLEEL 562
G +++ R +++ R ++ A + G +H + K+++ +E
Sbjct: 463 HG---ELDTARGILQRLREEDVVSWT---------AMIAGYTQHDLFAEALKLFQEMENQ 510
Query: 563 NVKLQEVGYVTDMTS 577
++ +G+ + +++
Sbjct: 511 GIRSDNIGFSSAISA 525
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/602 (43%), Positives = 362/602 (60%), Gaps = 41/602 (6%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M + +P TFP AIKSC+AL +GKQ H F G + FV ++LI MY KC
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ +ARKLFDE PQ + V + S+L+GY N ++ ++LF E E G
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEM----RELG-------- 108
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V ++ V + ++ C G+ HGF +K G D + VGN L+ Y + G +D R
Sbjct: 109 VEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGR 168
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
K+FD M K +TWN++I YAQNGLA L+++ +M +S + +TL VL + AHL
Sbjct: 169 KLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEM-ESKGFCPDPLTLVGVLSSCAHL 227
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G L +GK + ++ + + ++++MY +CG + AR F+ M K+V SWTA+I
Sbjct: 228 GALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAII 287
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
GYGMH + A+ LF +MI+ G++P+ FVSVLSACSHAGL +G + M ++ +
Sbjct: 288 GGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGL 347
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
PG EHY CMVDLLGRAG+L EA +LIE M+V+AD +WG+LLGAC+IH+NV+L E+A +
Sbjct: 348 RPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFE 407
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
++ ELEP N GY+VLLSN+Y AG E + R R LM+ R+L K PG S VE +G+VH F
Sbjct: 408 QVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFF 467
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLR---IHSEKLA- 599
GD+ HPQ +IY+ L EL V D+ + D E +E L +HSEKLA
Sbjct: 468 AGDRNHPQTNEIYKKLNELE------NLVKDLDGCKKN-DHERREEYLNSMGVHSEKLAV 520
Query: 600 -----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
NLR+CGDCH I+L+SK+VDR+ VVRD+ RFH+FK+G CSC +
Sbjct: 521 AFALLNTRKETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKE 580
Query: 643 YW 644
YW
Sbjct: 581 YW 582
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 179/383 (46%), Gaps = 31/383 (8%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNV-FSWNSVIADLARGGDSVEALRAFSSMRKLS 68
+S++S K S N LF++ + +NS+++ A + + F MR+L
Sbjct: 49 TSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELG 108
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
+ T ++ C +L G H FG D V + L+ MY K GE+ R
Sbjct: 109 VEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGR 168
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
KLFDE+P+ + +++W +M+ GY QN A L L+KE S D
Sbjct: 169 KLFDEMPR--KGLITWNAMINGYAQNGLANNVLELYKEM------------ESKGFCPDP 214
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
+ + VLS+C+ + V + + GF S + N L++ YAR G++ +R +FDG
Sbjct: 215 LTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDG 274
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M K V+W +II Y +G A+ +FD+M++ +K + +VL A +H G+
Sbjct: 275 MPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRG-GIKPDGTAFVSVLSACSHAGLTNK 333
Query: 309 GKCIHDQVIKMDLEESVIVG----TSIIDMYCKCGQVDLARKAFNQMKEKNVRS----WT 360
G D M+ + + G + ++D+ + G+++ AR+ M+ VR+ W
Sbjct: 334 GL---DYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQ---VRADGALWG 387
Query: 361 AMIAGYGMHCRAREALDLFYKMI 383
A++ +H R E +L ++ +
Sbjct: 388 ALLGACKIH-RNVELAELAFEQV 409
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 144/299 (48%), Gaps = 23/299 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + + + +WN++I A+ G + L + M P T + SC+ L
Sbjct: 170 LFDE-MPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLG 228
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK+ ++ FGF + F+++AL++MY++CG L AR +FD +P ++++VSWT++
Sbjct: 229 ALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMP--VKSVVSWTAI 286
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + A+ LF E + GG D A SVLSACS +
Sbjct: 287 IGGYGMHGQGEVAVGLFDEMIR-----GGIKP-------DGTAFVSVLSACSHAGL--TN 332
Query: 208 EGAHGF-VIKRGFDSEVGVG--NTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAI 263
+G F V++R + G + ++D R G ++ +R++ + M + D W +++
Sbjct: 333 KGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGA 392
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCN-AVTLSAVLLAIAHL-GVLRLGKCIHDQVIKMD 320
+ A F+Q+++ V LS V +L G+LR+ + + +K D
Sbjct: 393 CKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKD 451
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/639 (40%), Positives = 379/639 (59%), Gaps = 44/639 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAI-KSCSAL 86
+F++ +K+ + WN++I+ + VE+++ F + S T +T I + + L
Sbjct: 176 VFDRMPEKDTIL-WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+L G Q H A G + +V + I +YSKCG++ LF E R +IV++ +
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF--RKPDIVAYNA 292
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG- 205
M+ GY N +L LFKE +L GA S + S V V+G
Sbjct: 293 MIHGYTSNGETELSLSLFKELML-----SGARLRSSTL-------------VSLVPVSGH 334
Query: 206 --VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ HG+ +K F S V L Y++ ++ +RK+FD EK +WN++I+
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y QNGL +A+ +F +M KS + N VT++ +L A A LG L LGK +HD V D E
Sbjct: 395 YTQNGLTEDAISLFREMQKS-EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
S+ V T++I MY KCG + AR+ F+ M +KN +W MI+GYG+H + +EAL++FY+M+
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML 513
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+G+ P +TF+ VL ACSHAGLV+EG N+M H + EP V+HY CMVD+LGRAG L
Sbjct: 514 NSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHL 573
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
+ A IE M ++ VW +LLGACRIHK+ +L ++KLFEL+P+N GYHVLLSNI+
Sbjct: 574 QRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIH 633
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
+ + R K R+LAK PG++L+E+ H F GD+ HPQ ++IYE LE+L
Sbjct: 634 SADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLE 693
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
K++E GY + +HDV++EE+E+ +++HSE+LA NLRVC
Sbjct: 694 GKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCL 753
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCHTV +LISK+ +R IVVRD+ RFH+FKDG+CSCGDYW
Sbjct: 754 DCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 215/441 (48%), Gaps = 20/441 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHS 91
V + +VF +N ++ + +L F+ +RK + L P ST+ AI + S D +
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA 137
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ H QA + G ++ + S ++ MY K + DARK+FD +P+ ++ + W +M++GY
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE--KDTILWNTMISGY 195
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+N+ E++ +F++ + N +D+ + +L A + + + H
Sbjct: 196 RKNEMYVESIQVFRDLI-----------NESCTRLDTTTLLDILPAVAELQELRLGMQIH 244
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
K G S V I Y++ G + + +F + D V +N++I Y NG
Sbjct: 245 SLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETE 304
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+L +F +++ S + + TL +++ HL ++ IH +K + V T++
Sbjct: 305 LSLSLFKELMLS-GARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTAL 360
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+Y K +++ ARK F++ EK++ SW AMI+GY + +A+ LF +M K+ PN
Sbjct: 361 TTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNP 420
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+T +LSAC+ G + G W++ + + E + ++ + + G + EA L +
Sbjct: 421 VTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479
Query: 452 GMKVKADFVVWGSLLGACRIH 472
M K + V W +++ +H
Sbjct: 480 LM-TKKNEVTWNTMISGYGLH 499
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 152/314 (48%), Gaps = 13/314 (4%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H Q + GF D+ + + L S G + AR +F + QR ++ + ++ G+
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV-QR-PDVFLFNVLMRGFSV 95
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N++ +L +F S ++ +S A +SA S + HG
Sbjct: 96 NESPHSSLSVFAHL-----------RKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQ 144
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+ G DSE+ +G+ ++ Y + V+ +RKVFD M EKD + WN++I+ Y +N + E+
Sbjct: 145 AVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVES 204
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+ VF ++ + + + TL +L A+A L LRLG IH K V T I
Sbjct: 205 IQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFIS 264
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
+Y KCG++ + F + ++ ++ ++ AMI GY + +L LF +++ +G R T
Sbjct: 265 LYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST 324
Query: 394 FVSVLSACSHAGLV 407
VS++ H L+
Sbjct: 325 LVSLVPVSGHLMLI 338
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/636 (41%), Positives = 381/636 (59%), Gaps = 39/636 (6%)
Query: 30 NKYVD-KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD 88
NK++D +N SWN+ + +LAR EAL + M +P TFP A KSC++L
Sbjct: 12 NKWLDLQNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSL 71
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
+G Q H G + FV ++LI MY KC ++ ARK+FDE V + +++
Sbjct: 72 PLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALI 131
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
GY N +A+LLF++ + V V++V + ++ C+ G
Sbjct: 132 AGYSLNSRFSDAVLLFRQM------------RKEGVSVNAVTMLGLIPVCAGPIHLGFGT 179
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H ++ G D ++ VGN L+ Y R G VD +RK+FDGM EK +TWN++I+ YAQNG
Sbjct: 180 SLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNG 239
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
LA LD++ +M + T + + VTL VL + AHLG G+ + ++ + +
Sbjct: 240 LAGHVLDLYRKM-EFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLK 298
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
++I+MY +CG + AR F+ M EKNV SWTA+IAGYGMH + A+ LF +MI +
Sbjct: 299 NALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDEL 358
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+ FVSVLSACSHAGL ++G ++ M ++ ++PG EHY C+VDLLGRAG+L+EA
Sbjct: 359 PDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARK 418
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
LI M V+ D VWG+LLGAC+IH+NV+L E+A +K+ E EP N GY+VLLSNI++ AG
Sbjct: 419 LIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGN 478
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
E + R R +M+ R+L K PG S VE +G++H FL GD+ HPQ ++IY L+ L ++
Sbjct: 479 MEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKR 538
Query: 569 VGYVTDMTSVIHDVDQEEKEMT--LRIHSEKLA------------------NLRVCGDCH 608
G D +D + +E+ + +HSEKLA NLRVCGDCH
Sbjct: 539 RGGSND-----NDQESRNEELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCH 593
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
++L+S++VDR++VVRD+ RFH+FK+G+CSC DYW
Sbjct: 594 LFLKLVSEIVDRQLVVRDATRFHHFKNGVCSCKDYW 629
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/632 (41%), Positives = 386/632 (61%), Gaps = 39/632 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSALHDLHS 91
V + WN+++A L+ G ++VE+ F+ M S+ P +T + + + + D+
Sbjct: 175 VPSPDTVLWNTLLAGLS-GSEAVES---FARMVCDGSVRPDATTLASVLPAAAEVADVTM 230
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ H A G V + LI +YSKCG++ AR LFD + + ++V++ ++++GY
Sbjct: 231 GRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKP--DLVAYNALISGY 288
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
N ++ LF E + + ++ +S + +++ S + + + H
Sbjct: 289 SVNGMVGSSVNLFTELM------------TLGLWPNSSTLVALIPVHSPFGHDLLAQCLH 336
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
GFV+K GF + V + + R ++ +RK FD M EK +WN++I+ YAQNGL
Sbjct: 337 GFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTE 396
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
A+ +F+QMVK +V+ N +T+S+ L A A LG L LGK +H + + DLE +V V T++
Sbjct: 397 MAVALFEQMVK-LNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTAL 455
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
IDMY KCG + AR+ FN M KNV SW AMIAGYG+H + EAL L+ M+ A + P
Sbjct: 456 IDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTS 515
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI- 450
TF+SVL ACSH GLV+EGW +M ++ I PG+EH CMVDLLGRAG+LKEA++LI
Sbjct: 516 ATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELIS 575
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
E K VWG+LLGAC +HK+ DL ++A++KLFEL+P N GY+VLLSN++ + ++
Sbjct: 576 EFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYS 635
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
+ R K+R+L KTPG++L+E+ K H F+ GD+ HPQ E IY YLE+L K+ E G
Sbjct: 636 EAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAG 695
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
Y + + ++DV++EEKE +++HSEKLA NLRVC DCH +
Sbjct: 696 YRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATK 755
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
ISKV R IVVRD+ RFH+F+DG+CSCGDYW
Sbjct: 756 FISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 208/424 (49%), Gaps = 29/424 (6%)
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCS---------ALHDLHSGKQAHQQAFIFGFHRDV 108
LR+ S+R L P +F A + S + + H A G+ D
Sbjct: 90 LRSLPSLRPRLLFPCPDSFSFAFAATSLAALCSRGGGAASSSAARALHALAVAAGYAADT 149
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL 168
FV+SAL +Y + ARK+FD +P + V W ++L G + EA+ F +
Sbjct: 150 FVASALAKLYFVLSRVDHARKVFDTVPS--PDTVLWNTLLAGL----SGSEAVESFARMV 203
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
C G +V D+ +ASVL A + V + H F K G V
Sbjct: 204 -----CDG------SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTG 252
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
LI Y++ G V+ +R +FD M + D V +N++I+ Y+ NG+ ++++F +++ + +
Sbjct: 253 LISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELM-TLGLWP 311
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
N+ TL A++ + G L +C+H V+K + V T+I ++C+ ++ ARKAF
Sbjct: 312 NSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAF 371
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
+ M EK + SW AMI+GY + A+ LF +M+K VRPN IT S LSAC+ G +
Sbjct: 372 DTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALS 431
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
G WL+ + E ++EP V ++D+ + G + EA + M K + V W +++
Sbjct: 432 LG-KWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNK-NVVSWNAMIAG 489
Query: 469 CRIH 472
+H
Sbjct: 490 YGLH 493
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 161/334 (48%), Gaps = 42/334 (12%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA-AEALDVFDQMVKS 283
V + L Y VD +RKVFD + D V WN+++A GL+ +EA++ F +MV
Sbjct: 151 VASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLA-----GLSGSEAVESFARMVCD 205
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL 343
V+ +A TL++VL A A + + +G+C+H K L E V T +I +Y KCG V+
Sbjct: 206 GSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVES 265
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS------- 396
AR F+ M++ ++ ++ A+I+GY ++ +++LF +++ G+ PN T V+
Sbjct: 266 ARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSP 325
Query: 397 ----VLSACSHAGLVQEGWHW--------------LNTMG---HEFNIEP--GVEHYGCM 433
+L+ C H +++ G+ LN M F+ P +E + M
Sbjct: 326 FGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAM 385
Query: 434 VDLLGRAGKLKEAYDLIEGM---KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--L 488
+ + G + A L E M V+ + + S L AC + LG+ + + E L
Sbjct: 386 ISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDL 445
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNR 522
EPN L+ ++YA G + R + M N+
Sbjct: 446 EPNVYVMTALI-DMYAKCGSISEARRIFNTMDNK 478
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 3/150 (2%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN +D NV SWN++IA G EAL+ + M L PT +TF + +CS
Sbjct: 471 IFNT-MDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGG 529
Query: 88 DLHSG-KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ G K + + + + ++D+ + G+L +A +L E P+ W +
Sbjct: 530 LVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGA 589
Query: 147 MLTG-YVQNDNAREALLLFKEFLLEESECG 175
+L V D+ L K F L+ G
Sbjct: 590 LLGACMVHKDSDLAKLASQKLFELDPENSG 619
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 266/621 (42%), Positives = 380/621 (61%), Gaps = 45/621 (7%)
Query: 45 IADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF 104
A+ D A+RA +M + + T+ IK CSA + GK+ H+ F G+
Sbjct: 27 FANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGY 86
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ--NDNAREAL- 161
+FV + L++MY K L +A LFDE+P+R N+VSWT+M++ Y ND A + L
Sbjct: 87 EPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPER--NVVSWTTMISAYSNKLNDKALKCLI 144
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
L+F+E + N+F S SVL AC + H +IK G +S
Sbjct: 145 LMFREGV------------RPNMFTYS----SVLRACDGLPN---LRQLHCGIIKTGLES 185
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+V V + LID Y++ +D + VFD M +D V WNSII +AQN EAL++F +M
Sbjct: 186 DVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRM- 244
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
K + TL++VL A L +L LG+ +H V+K D + +I+ ++IDMYCKCG +
Sbjct: 245 KRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFD--QDLILNNALIDMYCKCGSL 302
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ A AF++M EK+V SW+ M+AG + +R+AL+LF M ++G RPNYIT + VL AC
Sbjct: 303 EDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFAC 362
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
SHAGLV++GW++ +M F ++PG EHYGC++DLLGRAG+L EA LI M+ + D V
Sbjct: 363 SHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVT 422
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKN 521
W +LLGACR+H+NVDL AAKK+ ELEP + G ++LLSNIYAN RWEDV R M N
Sbjct: 423 WRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTN 482
Query: 522 RRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHD 581
R + KTPG S +E+ ++H F++GD HP+ E+I + L +L ++ VGYV D V+ D
Sbjct: 483 RGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQD 542
Query: 582 VDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIV 623
++ E+KE +LR HSEKLA NLR+CGDCH +++S++ R IV
Sbjct: 543 LEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIV 602
Query: 624 VRDSKRFHYFKDGLCSCGDYW 644
+RD R+H+F+DG+CSCGDYW
Sbjct: 603 IRDPIRYHHFQDGVCSCGDYW 623
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 134/257 (52%), Gaps = 23/257 (8%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
S+++ K S N +F++ ++ V WNS+I A+ D EAL F M++
Sbjct: 191 SALIDVYSKWSDLDNALGVFDEMPTRDLVV-WNSIIGGFAQNSDGNEALNLFKRMKRAGF 249
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
++T +++C+ L L G+Q H + F +D+ +++ALIDMY KCG L DA
Sbjct: 250 LADQATLTSVLRACTGLALLELGRQVH--VHVLKFDQDLILNNALIDMYCKCGSLEDANS 307
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
F + + ++++SW++M+ G QN +R+AL LF+ ++ES G+ N +
Sbjct: 308 AFSRMVE--KDVISWSTMVAGLAQNGYSRQALELFES--MKES---GSRPN-------YI 353
Query: 190 AIASVLSACSRVTVNGVTEGAHGF-VIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVF 246
+ VL ACS + V +G + F +K+ F + G + LID R G +D + K+
Sbjct: 354 TVLGVLFACSHAGL--VEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLI 411
Query: 247 DGM-IEKDAVTWNSIIA 262
M E D+VTW +++
Sbjct: 412 HEMECEPDSVTWRTLLG 428
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/623 (39%), Positives = 396/623 (63%), Gaps = 34/623 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
+WN++I +R G EAL + M + P ST+ +K+C+ DL SG++ +QA
Sbjct: 72 AWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQA 131
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G+ DVFV +A++++Y+KCG++ +A ++FD++ +R ++V WT+M+TG QN ARE
Sbjct: 132 VDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRR--DLVCWTTMITGLAQNGQARE 189
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+ ++++ + V D V + ++ AC+ + + + HG++I++
Sbjct: 190 AVDIYRQM------------HKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDI 237
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+V V +L+D YA+ GH++++ VF M+ K+ ++W+++I+ +AQNG A AL +
Sbjct: 238 IMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVD 297
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M +S K ++V+L +VLLA + +G L+LGK +H +++ L + T++IDMY KCG
Sbjct: 298 M-QSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVR-RLHFDCVSSTAVIDMYSKCG 355
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+ AR F+Q+ ++ SW A+IA YG+H EAL LF +M + V+P++ TF S+LS
Sbjct: 356 SLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLS 415
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
A SH+GLV++G +W + M +E+ I+P +HY CMVDLL RAG+++EA +LIE M +
Sbjct: 416 AFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGI 475
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
+W +LL C H +GE+AAKK+ EL P++ G + L+SN +A A RW++V R +M
Sbjct: 476 AIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIM 535
Query: 520 KNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVI 579
K + K PG+S++E+ GK+HAFL+ DK H Q+E+I + L +L+ +++ +GYV V+
Sbjct: 536 KKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVL 595
Query: 580 HDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDRE 621
H++++E KE L HSE+LA NLRVCGDCH + ISK+V+RE
Sbjct: 596 HNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNRE 655
Query: 622 IVVRDSKRFHYFKDGLCSCGDYW 644
IVVRD KRFH+FKDG+CSCGDYW
Sbjct: 656 IVVRDVKRFHHFKDGVCSCGDYW 678
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 133/258 (51%), Gaps = 7/258 (2%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +I G LI +YAR GH++ +R+VFD + WN++I Y++ G
Sbjct: 27 HALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAM 86
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EAL ++ +M S V+ ++ T + VL A LR G+ Q + + V VG +
Sbjct: 87 FEALSLYHRMA-SEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAA 145
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++++Y KCG++D A + F++M +++ WT MI G + +AREA+D++ +M K V +
Sbjct: 146 VLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGD 205
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEF--NIEPGVEHYGCMVDLLGRAGKLKEAYD 448
+ + ++ AC+ G + G L+ G+ +I V +VD+ + G L+ A
Sbjct: 206 GVVMLGLIQACTTLGHSKMG---LSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASC 262
Query: 449 LIEGMKVKADFVVWGSLL 466
+ M K + + W +L+
Sbjct: 263 VFRRMLYK-NVISWSALI 279
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 31/259 (11%)
Query: 14 SNVDKHSTNTNL---TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT 70
S VD ++ N +L + +F + + KN V SW+++I+ A+ G + AL+ M+
Sbjct: 246 SLVDMYAKNGHLELASCVFRRMLYKN-VISWSALISGFAQNGFAGNALQLVVDMQSFGYK 304
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P + + +CS + L GK H + H D S+A+IDMYSKCG LS AR +
Sbjct: 305 PDSVSLVSVLLACSQVGFLKLGKSVHGY-IVRRLHFDCVSSTAVIDMYSKCGSLSFARTV 363
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
FD+I R+ +SW +++ Y + + EAL LF + NV D
Sbjct: 364 FDQIS--FRDSISWNAIIASYGIHGSGEEALSLFLQM------------RETNVKPDHAT 409
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT------LIDAYARGGHVDVSRK 244
AS+LSA S + V +G + F I +E + + ++D +R G V+ +++
Sbjct: 410 FASLLSAFSHSGL--VEKGRYWFSI---MVNEYKIQPSEKHYACMVDLLSRAGRVEEAQE 464
Query: 245 VFDGMIEKDAVT-WNSIIA 262
+ + MI + + W ++++
Sbjct: 465 LIESMITEPGIAIWVALLS 483
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 277/720 (38%), Positives = 404/720 (56%), Gaps = 90/720 (12%)
Query: 6 SSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR 65
++S+ S +N ST L+ + ++ +FS++S+I AR L FS +
Sbjct: 38 TTSLLSFYANALSLST-PQLSLTLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLH 96
Query: 66 KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
L L P P AIKSC++L L G+Q H A GF D V+S+L MY KC +
Sbjct: 97 PLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRIL 156
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN----- 180
DARKLFD +P R ++V W++M+ GY + EA LF E GG N
Sbjct: 157 DARKLFDRMPDR--DVVVWSAMIAGYSRLGLVEEAKELFGEM-----RSGGVEPNLVSWN 209
Query: 181 ------SDNVFVDSV-----------------AIASVLSACSRVTVNGVTEGAHGFVIKR 217
+N F D ++ VL A + V HG+VIK+
Sbjct: 210 GMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQ 269
Query: 218 GFDS-------------------------------EVGVGNTLIDAYARGGHVDVSRKVF 246
G S E+G N + +R G VD + +VF
Sbjct: 270 GLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVF 329
Query: 247 ----DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
D +E + VTW SIIA +QNG EAL++F M ++ V+ NAVT+ +++ A +
Sbjct: 330 NKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDM-QAYGVEPNAVTIPSLIPACGN 388
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
+ L GK IH ++ + + V VG+++IDMY KCG++ LAR+ F++M N+ SW A+
Sbjct: 389 ISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAV 448
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
+ GY MH +A+E +++F+ M+++G +P+ +TF VLSAC+ GL +EGW N+M E
Sbjct: 449 MKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHG 508
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
IEP +EHY C+V LL R GKL+EAY +I+ M + D VWG+LL +CR+H N+ LGEIAA
Sbjct: 509 IEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAA 568
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
+KLF LEP N G ++LLSNIYA+ G W++ R R +MK++ L K PG+S +E+ KVH
Sbjct: 569 EKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHML 628
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
L GD+ HPQ + I E L++LN+++++ GY+ V+ DV++++KE L HSEKLA
Sbjct: 629 LAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVL 688
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH VI++IS++ REI VRD+ RFH+FKDG+CSCGD+W
Sbjct: 689 GLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTNRFHHFKDGVCSCGDFW 748
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 6/221 (2%)
Query: 195 LSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARG---GHVDVSRKVFDGM 249
LS C + +++ AH +++ S+ + +L+ YA +S + +
Sbjct: 5 LSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHL 64
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+++S+I +A++ L F + + +A L + + + A L L G
Sbjct: 65 PHPTLFSFSSLIHAFARSHHFPHVLTTFSHL-HPLRLIPDAFLLPSAIKSCASLRALDPG 123
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
+ +H IV +S+ MY KC ++ ARK F++M +++V W+AMIAGY
Sbjct: 124 QQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRL 183
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
EA +LF +M GV PN +++ +L+ + G E
Sbjct: 184 GLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEA 224
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/680 (38%), Positives = 391/680 (57%), Gaps = 80/680 (11%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K + + NVFSW +++ GD E ++ F M + P FP K+CS L
Sbjct: 67 MFDK-MSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK 125
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ GK + GF + V +++DM+ KCG + AR+ F+EI +++ W M
Sbjct: 126 NYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI--EFKDVFMWNIM 183
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY ++AL +F++ +LE G NS + IAS +SAC+ +++
Sbjct: 184 VSGYTSKGEFKKALNVFRKMVLE-----GVKPNS-------ITIASAVSACTNLSLLRHG 231
Query: 208 EGAHGFVIK-RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE--------------- 251
HG+ IK DS++ VGN+L+D YA+ V+V+R+ F GMI+
Sbjct: 232 REIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF-GMIKQTDLVSWNAMLAVTG 290
Query: 252 -----------------------------KDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
+D V WNSII+ AQ+G + ALD+ +M
Sbjct: 291 FTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREM-N 349
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
++V+ N VT+ + L A + L LR GK IH +I+ L+ + S+IDMY +CG +
Sbjct: 350 LSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQ 409
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
+R+ F+ M ++++ SW MI+ YGMH +A++LF + G++PN+ITF ++LSACS
Sbjct: 410 KSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACS 469
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW 462
H+GL++EGW + M E+ ++P VE Y CMVDLL RAG+ E + IE M + + VW
Sbjct: 470 HSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVW 529
Query: 463 GSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNR 522
GSLLGACRIH N DL E AA+ LFELEP + G +VL++NIY+ AGRWED + R LMK R
Sbjct: 530 GSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKER 589
Query: 523 RLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDV 582
+ K PG S +E++ K+H+F+VGD HP E+I +E L ++E+GYV D V+ DV
Sbjct: 590 GVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDV 649
Query: 583 DQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVV 624
D++EKE +L HSEK+A NLRVCGDCH+ + ISKV R+I++
Sbjct: 650 DEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIM 709
Query: 625 RDSKRFHYFKDGLCSCGDYW 644
RD+ RFH+F DG+CSCGDYW
Sbjct: 710 RDNYRFHHFVDGVCSCGDYW 729
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 228/475 (48%), Gaps = 79/475 (16%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++ C L++L G Q H Q + G F+ S L+++Y + G + DAR++FD++ +R
Sbjct: 17 LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER-- 74
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+ SWT+++ Y + E + LF + ++ V D V ACS
Sbjct: 75 NVFSWTAIMEMYCGLGDYEETIKLFYLMV------------NEGVRPDHFVFPKVFKACS 122
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ V + + +++ GF+ V +++D + + G +D++R+ F+ + KD WN
Sbjct: 123 ELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNI 182
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+++ Y G +AL+VF +MV VK N++T+++ + A +L +LR G+ IH IK+
Sbjct: 183 MVSGYTSKGEFKKALNVFRKMVLE-GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKV 241
Query: 320 D-LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG----------- 367
+ L+ ++VG S++D Y KC V++AR+ F +K+ ++ SW AM+A G
Sbjct: 242 EELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAAL 301
Query: 368 -----MHC---------------------------RAREALDLFYKMIKAGVRPNYITFV 395
MH R+ ALDL +M + V N +T V
Sbjct: 302 EFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMV 361
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIE 451
S L ACS +++G H+F I G++ ++D+ GR G ++++ + +
Sbjct: 362 SALPACSKLAALRQGKEI-----HQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFD 416
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLS 500
M + D V W ++ +H G + A LF+ L+PN+ + LLS
Sbjct: 417 LMP-QRDLVSWNVMISVYGMH---GFG-MDAVNLFQQFRTMGLKPNHITFTNLLS 466
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 126/219 (57%), Gaps = 1/219 (0%)
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
AS+L C ++ + H ++ G D +G+ L++ Y + G V+ +R++FD M E
Sbjct: 14 ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 73
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
++ +W +I+ +Y G E + +F MV + V+ + V A + L R+GK
Sbjct: 74 RNVFSWTAIMEMYCGLGDYEETIKLFYLMV-NEGVRPDHFVFPKVFKACSELKNYRVGKD 132
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
++D ++ + E + V SI+DM+ KCG++D+AR+ F +++ K+V W M++GY
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
++AL++F KM+ GV+PN IT S +SAC++ L++ G
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHG 231
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/640 (40%), Positives = 377/640 (58%), Gaps = 47/640 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ +WN+V++ L + +EAL M + P T + +CS L L +GK+ H
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 97 QQAFIFG-FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
A G + FV SAL+DMY C ++ R++FD + R I W +M+ GY QN+
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR--KIGLWNAMIAGYSQNE 383
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+ +EALLLF E S + +S +A V+ AC R E HGFV+
Sbjct: 384 HDKEALLLFI-----------GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
KRG D + V NTL+D Y+R G +D++ ++F M ++D VTWN++I Y + +AL
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 276 VFDQM----------VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+ +M +K N++TL +L + A L L GK IH IK +L V
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VG++++DMY KCG + ++RK F+Q+ +KNV +W +I YGMH +EA+DL M+
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
GV+PN +TF+SV +ACSH+G+V EG M ++ +EP +HY C+VDLLGRAG++KE
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 672
Query: 446 AYDLIEGMKVKADFV---VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
AY L+ M DF W SLLGA RIH N+++GEIAA+ L +LEPN ++VLL+NI
Sbjct: 673 AYQLMNMM--PRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI 730
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
Y++AG W+ R MK + + K PG S +E +VH F+ GD HPQ EK+ YLE L
Sbjct: 731 YSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVC 604
++++ GYV D + V+H+V+++EKE+ L HSEKLA NLRVC
Sbjct: 791 WERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVC 850
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH + ISK+VDREI++RD +RFH FK+G CSCGDYW
Sbjct: 851 NDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 227/462 (49%), Gaps = 33/462 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL- 86
+F++ ++N V SWNS+I+ L AL AF M ++ P+ T + +CS L
Sbjct: 155 VFDRISERNQV-SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 87 --HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
L GKQ H G + F+ + L+ MY K G+L+ ++ L R++V+W
Sbjct: 214 MPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG--RDLVTW 270
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++L+ QN+ EAL +E +LE E D I+SVL ACS + +
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVE------------PDEFTISSVLPACSHLEML 318
Query: 205 GVTEGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ H + +K G D VG+ L+D Y V R+VFDGM ++ WN++IA
Sbjct: 319 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y+QN EAL +F M +S + N+ T++ V+ A G + IH V+K L+
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR 438
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM- 382
V +++DMY + G++D+A + F +M+++++ +W MI GY +AL L +KM
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ 498
Query: 383 ----------IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC 432
+ ++PN IT +++L +C+ + +G ++ + N+ V
Sbjct: 499 NLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSA 557
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
+VD+ + G L+ + + + + K + + W ++ A +H N
Sbjct: 558 LVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN 598
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 219/436 (50%), Gaps = 32/436 (7%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
W ++ R EA+ + M L + P FP +K+ + L D+ GKQ H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 101 IFGFHRD-VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
FG+ D V V++ L+++Y KCG+ K+FD I + RN VSW S+++ +
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE--RNQVSWNSLISSLCSFEKWEM 182
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV-NGVTEG--AHGFVIK 216
AL F+ L +NV S + SV++ACS + + G+ G H + ++
Sbjct: 183 ALEAFRCML------------DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR 230
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
+G + + NTL+ Y + G + S+ + +D VTWN++++ QN EAL+
Sbjct: 231 KG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEY 289
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMY 335
+MV V+ + T+S+VL A +HL +LR GK +H +K L+E+ VG++++DMY
Sbjct: 290 LREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK-AGVRPNYITF 394
C C QV R+ F+ M ++ + W AMIAGY + +EAL LF M + AG+ N T
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLI 450
V+ AC +G H F ++ G++ ++D+ R GK+ A +
Sbjct: 409 AGVVPACVRSGAFSR-----KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 451 EGMKVKADFVVWGSLL 466
M+ + D V W +++
Sbjct: 464 GKMEDR-DLVTWNTMI 478
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 10/241 (4%)
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
W ++ ++ L EA+ + M+ +K + A+L A+A L + LGK IH V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMI-VLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 317 IKMDLE-ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
K +SV V +++++Y KCG K F+++ E+N SW ++I+ + A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH---YGC 432
L+ F M+ V P+ T VSV++ACS+ + EG + H + + G +
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLM-MGKQVHAYGLRKGELNSFIINT 241
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA-CRIHKNVDLGEIAAKKLFE-LEP 490
+V + G+ GKL + L+ + D V W ++L + C+ + ++ E + + E +EP
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 491 N 491
+
Sbjct: 301 D 301
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV +WN +I G+ EA+ M + P TF +CS HSG
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS-----HSG 632
Query: 93 KQAHQQAFIFGFHRDVFVSSA------LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ D V + ++D+ + G + +A +L + +P+ +W+S
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 147 ML 148
+L
Sbjct: 693 LL 694
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/640 (40%), Positives = 377/640 (58%), Gaps = 47/640 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ +WN+V++ L + +EAL M + P T + +CS L L +GK+ H
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 97 QQAFIFG-FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
A G + FV SAL+DMY C ++ R++FD + R I W +M+ GY QN+
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR--KIGLWNAMIAGYSQNE 383
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+ +EALLLF E S + +S +A V+ AC R E HGFV+
Sbjct: 384 HDKEALLLFI-----------GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
KRG D + V NTL+D Y+R G +D++ ++F M ++D VTWN++I Y + +AL
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 276 VFDQM----------VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+ +M +K N++TL +L + A L L GK IH IK +L V
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VG++++DMY KCG + ++RK F+Q+ +KNV +W +I YGMH +EA+DL M+
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
GV+PN +TF+SV +ACSH+G+V EG M ++ +EP +HY C+VDLLGRAG++KE
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 672
Query: 446 AYDLIEGMKVKADFV---VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
AY L+ M DF W SLLGA RIH N+++GEIAA+ L +LEPN ++VLL+NI
Sbjct: 673 AYQLMNMM--PRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI 730
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
Y++AG W+ R MK + + K PG S +E +VH F+ GD HPQ EK+ YLE L
Sbjct: 731 YSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVC 604
++++ GYV D + V+H+V+++EKE+ L HSEKLA NLRVC
Sbjct: 791 WERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVC 850
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH + ISK+VDREI++RD +RFH FK+G CSCGDYW
Sbjct: 851 NDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 227/462 (49%), Gaps = 33/462 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL- 86
+F++ ++N V SWNS+I+ L AL AF M ++ P+ T + +CS L
Sbjct: 155 VFDRISERNQV-SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 87 --HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
L GKQ H G + F+ + L+ MY K G+L+ ++ L R++V+W
Sbjct: 214 MPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG--RDLVTW 270
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++L+ QN+ EAL +E +LE E D I+SVL ACS + +
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVE------------PDEFTISSVLPACSHLEML 318
Query: 205 GVTEGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ H + +K G D VG+ L+D Y V R+VFDGM ++ WN++IA
Sbjct: 319 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y+QN EAL +F M +S + N+ T++ V+ A G + IH V+K L+
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR 438
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM- 382
V +++DMY + G++D+A + F +M+++++ +W MI GY +AL L +KM
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ 498
Query: 383 ----------IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC 432
+ ++PN IT +++L +C+ + +G ++ + N+ V
Sbjct: 499 NLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSA 557
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
+VD+ + G L+ + + + + K + + W ++ A +H N
Sbjct: 558 LVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN 598
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 219/436 (50%), Gaps = 32/436 (7%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
W ++ R EA+ + M L + P FP +K+ + L D+ GKQ H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 101 IFGFHRD-VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
FG+ D V V++ L+++Y KCG+ K+FD I + RN VSW S+++ +
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE--RNQVSWNSLISSLCSFEKWEM 182
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV-NGVTEG--AHGFVIK 216
AL F+ L +NV S + SV++ACS + + G+ G H + ++
Sbjct: 183 ALEAFRCML------------DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR 230
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
+G + + NTL+ Y + G + S+ + +D VTWN++++ QN EAL+
Sbjct: 231 KG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEY 289
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMY 335
+MV V+ + T+S+VL A +HL +LR GK +H +K L+E+ VG++++DMY
Sbjct: 290 LREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK-AGVRPNYITF 394
C C QV R+ F+ M ++ + W AMIAGY + +EAL LF M + AG+ N T
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLI 450
V+ AC +G H F ++ G++ ++D+ R GK+ A +
Sbjct: 409 AGVVPACVRSGAFSR-----KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 451 EGMKVKADFVVWGSLL 466
M+ + D V W +++
Sbjct: 464 GKMEDR-DLVTWNTMI 478
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 10/241 (4%)
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
W ++ ++ L EA+ + M+ +K + A+L A+A L + LGK IH V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMI-VLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 317 IKMDLE-ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
K +SV V +++++Y KCG K F+++ E+N SW ++I+ + A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH---YGC 432
L+ F M+ V P+ T VSV++ACS+ + EG + H + + G +
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLM-MGKQVHAYGLRKGELNSFIINT 241
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA-CRIHKNVDLGEIAAKKLFE-LEP 490
+V + G+ GKL + L+ + D V W ++L + C+ + ++ E + + E +EP
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 491 N 491
+
Sbjct: 301 D 301
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV +WN +I G+ EA+ M + P TF +CS HSG
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS-----HSG 632
Query: 93 KQAHQQAFIFGFHRDVFVSSA------LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ D V + ++D+ + G + +A +L + +P+ +W+S
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 147 ML 148
+L
Sbjct: 693 LL 694
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/640 (40%), Positives = 377/640 (58%), Gaps = 47/640 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ +WN+V++ L + +EAL M + P T + +CS L L +GK+ H
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 238
Query: 97 QQAFIFG-FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
A G + FV SAL+DMY C ++ R++FD + R I W +M+ GY QN+
Sbjct: 239 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR--KIGLWNAMIAGYSQNE 296
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+ +EALLLF E S + +S +A V+ AC R E HGFV+
Sbjct: 297 HDKEALLLFI-----------GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 345
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
KRG D + V NTL+D Y+R G +D++ ++F M ++D VTWN++I Y + +AL
Sbjct: 346 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 405
Query: 276 VFDQM----------VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+ +M +K N++TL +L + A L L GK IH IK +L V
Sbjct: 406 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 465
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VG++++DMY KCG + ++RK F+Q+ +KNV +W +I YGMH +EA+DL M+
Sbjct: 466 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 525
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
GV+PN +TF+SV +ACSH+G+V EG M ++ +EP +HY C+VDLLGRAG++KE
Sbjct: 526 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 585
Query: 446 AYDLIEGMKVKADFV---VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
AY L+ M DF W SLLGA RIH N+++GEIAA+ L +LEPN ++VLL+NI
Sbjct: 586 AYQLMNMM--PRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI 643
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
Y++AG W+ R MK + + K PG S +E +VH F+ GD HPQ EK+ YLE L
Sbjct: 644 YSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 703
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVC 604
++++ GYV D + V+H+V+++EKE+ L HSEKLA NLRVC
Sbjct: 704 WERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVC 763
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH + ISK+VDREI++RD +RFH FK+G CSCGDYW
Sbjct: 764 NDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 227/462 (49%), Gaps = 33/462 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL- 86
+F++ ++N V SWNS+I+ L AL AF M ++ P+ T + +CS L
Sbjct: 68 VFDRISERNQV-SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 126
Query: 87 --HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
L GKQ H G + F+ + L+ MY K G+L+ ++ L R++V+W
Sbjct: 127 MPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG--RDLVTW 183
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++L+ QN+ EAL +E +LE E D I+SVL ACS + +
Sbjct: 184 NTVLSSLCQNEQLLEALEYLREMVLEGVE------------PDEFTISSVLPACSHLEML 231
Query: 205 GVTEGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ H + +K G D VG+ L+D Y V R+VFDGM ++ WN++IA
Sbjct: 232 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 291
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y+QN EAL +F M +S + N+ T++ V+ A G + IH V+K L+
Sbjct: 292 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR 351
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM- 382
V +++DMY + G++D+A + F +M+++++ +W MI GY +AL L +KM
Sbjct: 352 DRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ 411
Query: 383 ----------IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC 432
+ ++PN IT +++L +C+ + +G ++ + N+ V
Sbjct: 412 NLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSA 470
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
+VD+ + G L+ + + + + K + + W ++ A +H N
Sbjct: 471 LVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN 511
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 210/410 (51%), Gaps = 32/410 (7%)
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRD-VFVSSALIDMYSKCGELS 125
L + P FP +K+ + L D+ GKQ H + FG+ D V V++ L+++Y KCG+
Sbjct: 4 LGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 63
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
K+FD I + RN VSW S+++ + AL F+ L +NV
Sbjct: 64 AVYKVFDRISE--RNQVSWNSLISSLCSFEKWEMALEAFRCML------------DENVE 109
Query: 186 VDSVAIASVLSACSRVTV-NGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
S + SV++ACS + + G+ G H + +++G + + NTL+ Y + G + S
Sbjct: 110 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASS 168
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
+ + +D VTWN++++ QN EAL+ +MV V+ + T+S+VL A +H
Sbjct: 169 KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE-GVEPDEFTISSVLPACSH 227
Query: 303 LGVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
L +LR GK +H +K L+E+ VG++++DMYC C QV R+ F+ M ++ + W A
Sbjct: 228 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNA 287
Query: 362 MIAGYGMHCRAREALDLFYKMIK-AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
MIAGY + +EAL LF M + AG+ N T V+ AC +G H
Sbjct: 288 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-----KEAIHG 342
Query: 421 FNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
F ++ G++ ++D+ R GK+ A + M+ + D V W +++
Sbjct: 343 FVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMI 391
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 106/212 (50%), Gaps = 9/212 (4%)
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE-ESVIVGTSIIDMYCKCGQVDLA 344
+K + A+L A+A L + LGK IH V K +SV V +++++Y KCG
Sbjct: 6 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
K F+++ E+N SW ++I+ + AL+ F M+ V P+ T VSV++ACS+
Sbjct: 66 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEH---YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+ EG + H + + G + +V + G+ GKL + L+ + D V
Sbjct: 126 PM-PEGL-MMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVT 182
Query: 462 WGSLLGA-CRIHKNVDLGEIAAKKLFE-LEPN 491
W ++L + C+ + ++ E + + E +EP+
Sbjct: 183 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 214
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV +WN +I G+ EA+ M + P TF +CS HSG
Sbjct: 491 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS-----HSG 545
Query: 93 KQAHQQAFIFGFHRDVFVSSA------LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ D V + ++D+ + G + +A +L + +P+ +W+S
Sbjct: 546 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 605
Query: 147 ML 148
+L
Sbjct: 606 LL 607
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/637 (39%), Positives = 393/637 (61%), Gaps = 35/637 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+TL ++ + +WN+++A +R G ALR F ++ S P +TF A+ +C+
Sbjct: 65 STLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALPS-SARPDSTTFTLALTACAR 123
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L DL + + +AF G+ RDVFV SAL+ +YS+CG + DA ++FD +P++ + V+W+
Sbjct: 124 LGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRK--DHVAWS 181
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M+ G+V EAL ++ V D V + V+ AC+
Sbjct: 182 TMVAGFVSAGRPVEALGMYSRM------------REHGVAEDEVVMVGVIQACTLTGNTR 229
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ HG ++ G +V + +L+D YA+ GH DV+R+VF M ++AV+WN++I+ +A
Sbjct: 230 MGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFA 289
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QNG A EALD+F +M ++ ++ ++ L + LLA A +G L+LGK IH +++ LE
Sbjct: 290 QNGHADEALDLFREM-STSGLQPDSGALVSALLACADVGFLKLGKSIHGFILR-RLEFQC 347
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
I+GT+++DMY KCG ++ ARK FN++ +++ W AMIA G H +AL LF ++ +
Sbjct: 348 ILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNET 407
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G++P++ TF S+LSA SH+GLV+EG W + M EF IEP +H C+VDLL R+G ++E
Sbjct: 408 GIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEE 467
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A +++ M + +W +LL C +K ++LGE AKK+ E +P + G L+SN+YA
Sbjct: 468 ANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLYAA 527
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
A +W+ V R LMK+ K PG+SL+E+ G HAF++ D+ HPQH++I + + +L+ +
Sbjct: 528 AKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLSFE 587
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++++GYV V HD+D++ KE L HSE+LA NLRVCGDC
Sbjct: 588 MRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDC 647
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H I+ ISK+VDREIVVRD+KRFH+FKDG CSCGDYW
Sbjct: 648 HDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/655 (39%), Positives = 389/655 (59%), Gaps = 34/655 (5%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S +++V K + ++F K + + ++ SWN+VIA +AL M++
Sbjct: 295 SANALVDMYAKVGDLADAISVFEK-IKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRS 353
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
+ P T A+K+C+ + G+Q H D+FVS L+DMYSKC L DA
Sbjct: 354 GICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDA 413
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R F+ +P++ ++++W ++++GY Q EAL LF E + + + +
Sbjct: 414 RMAFNLLPEK--DLIAWNAIISGYSQYWEDMEALSLFVEM------------HKEGIGFN 459
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
++++L + + + V V HG +K GF S++ V N+LID+Y + HV+ + ++F+
Sbjct: 460 QTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFE 519
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
D V++ S+I YAQ G EAL +F +M + ++K + S++L A A+L
Sbjct: 520 ECTIGDLVSFTSMITAYAQYGQGEEALKLFLEM-QDMELKPDRFVCSSLLNACANLSAFE 578
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
GK +H ++K + G S+++MY KCG +D A +AF+++ E+ + SW+AMI G
Sbjct: 579 QGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLA 638
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
H R+AL LF +M+K GV PN+IT VSVL AC+HAGLV E + +M F +P
Sbjct: 639 QHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQ 698
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
EHY CM+DLLGRAGK+ EA +L+ M +A+ VWG+LLGA RIHK+V+LG AA+ LF
Sbjct: 699 EHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFI 758
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
LEP G HVLL+NIYA+AG+WE+V R LM++ ++ K PG S +E++ KV+ FLVGD+
Sbjct: 759 LEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDR 818
Query: 548 EHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------- 599
H + ++IY L+EL+ + + GYV + +HDV+Q EKE+ L HSEKLA
Sbjct: 819 SHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIAT 878
Query: 600 ----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT + I K+V REI+VRD RFH+FKDG CSCGDYW
Sbjct: 879 PQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 274/535 (51%), Gaps = 64/535 (11%)
Query: 31 KYVDKN---NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
K VD++ ++ SW+++I+ A+ G AL AF M L + TF +K+CS +
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVK 171
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL GKQ H + GF DVFV++ L+ MY+KC E D+++LFDEIP+ RN+VSW ++
Sbjct: 172 DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPE--RNVVSWNAL 229
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ YVQ D EA+ LF E +L + + +++S+++AC+ + +
Sbjct: 230 FSCYVQIDFCGEAVGLFYEMVL------------SGIKPNEFSLSSMVNACTGLRDSSRG 277
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG++IK G+D + N L+D YA+ G + + VF+ + + D V+WN++IA +
Sbjct: 278 KIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLH 337
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+AL++ QM K + + N TLS+ L A A +G+ LG+ +H ++KMD+E + V
Sbjct: 338 EHHEQALELLGQM-KRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFV 396
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++DMY KC ++ AR AFN + EK++ +W A+I+GY + EAL LF +M K G+
Sbjct: 397 SVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGI 456
Query: 388 RPNYITFVSVLSACS-----------HAGLVQEGWH--------WLNTMGHEFNIEPG-- 426
N T ++L + + H V+ G+H +++ G ++E
Sbjct: 457 GFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAER 516
Query: 427 ---------VEHYGCMVDLLGRAGKLKEAYDL---IEGMKVKADFVVWGSLLGACRIHKN 474
+ + M+ + G+ +EA L ++ M++K D V SLL AC
Sbjct: 517 IFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC----- 571
Query: 475 VDLGEIAAKKLFELEPNNCGYHVL-------LSNIYANAGRWEDVERTRSLMKNR 522
+L K + G+ VL L N+YA G +D R S + R
Sbjct: 572 ANLSAFEQGKQLHVHILKYGF-VLDIFAGNSLVNMYAKCGSIDDAGRAFSELTER 625
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 204/401 (50%), Gaps = 17/401 (4%)
Query: 66 KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
K + TPT ++ + C L G Q H G D + + LI++YSKC
Sbjct: 49 KGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFG 108
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
ARKL DE + ++VSW+++++GY QN AL+ F E L +C
Sbjct: 109 YARKLVDESSE--PDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKC----------- 155
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+ +SVL ACS V + + HG V+ GF+ +V V NTL+ YA+ S+++
Sbjct: 156 -NEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL 214
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD + E++ V+WN++ + Y Q EA+ +F +MV S +K N +LS+++ A L
Sbjct: 215 FDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLS-GIKPNEFSLSSMVNACTGLRD 273
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
GK IH +IK+ + +++DMY K G + A F ++K+ ++ SW A+IAG
Sbjct: 274 SSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAG 333
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
+H +AL+L +M ++G+ PN T S L AC+ GL + G L++ + ++E
Sbjct: 334 CVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELG-RQLHSSLMKMDMES 392
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ +VD+ + L++A + K D + W +++
Sbjct: 393 DLFVSVGLVDMYSKCDLLEDARMAFNLLPEK-DLIAWNAII 432
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 159/305 (52%), Gaps = 29/305 (9%)
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
N SV+ + +LS C T + G H + K G + + N LI+ Y++ +
Sbjct: 51 NFTPTSVSYSKLLSQC--CTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFG 108
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+RK+ D E D V+W+++I+ YAQNGL AL F +M VKCN T S+VL A
Sbjct: 109 YARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEM-HLLGVKCNEFTFSSVLKAC 167
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
+ + LR+GK +H V+ E V V +++ MY KC + +++ F+++ E+NV SW
Sbjct: 168 SIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWN 227
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQE 409
A+ + Y EA+ LFY+M+ +G++PN + S+++AC+ H L++
Sbjct: 228 ALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKL 287
Query: 410 GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G+ W +P + +VD+ + G L +A + E +K + D V W +++ C
Sbjct: 288 GYDW----------DPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGC 334
Query: 470 RIHKN 474
+H++
Sbjct: 335 VLHEH 339
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/630 (41%), Positives = 381/630 (60%), Gaps = 34/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + ++ SWN+++A ++ G + AL + M + +L P+ T + + SAL + G
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIG 255
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H A GF V +++AL+DMY+KCG L AR LFD + +R N+VSW SM+ YV
Sbjct: 256 KEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLER--NVVSWNSMIDAYV 313
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN+N +EA+++F++ L + V V++ L AC+ + H
Sbjct: 314 QNENPKEAMVIFQKML------------DEGVKPTDVSVMGALHACADLGDLERGRFIHK 361
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++ D V V N+LI Y + VD + +F + + V+WN++I +AQNG E
Sbjct: 362 LSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIE 421
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL+ F QM T VK + T +V+ AIA L + K IH V++ L+++V V T+++
Sbjct: 422 ALNYFSQMQART-VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALV 480
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG + +AR F+ M E++V +W AMI GYG H + AL+LF +M K +RPN +
Sbjct: 481 DMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGV 540
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+SV+SACSH+GLV+ G + M ++IEP ++HYG MVDLLGRAG+L EA+D I
Sbjct: 541 TFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQ 600
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M VK V+G++LGAC+IHKNV+ E A++LFEL P + GYHVLL+NIY A WE V
Sbjct: 601 MPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKV 660
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+ R M + L KTPG S+VE++ +VH+F G HP +KIY +LE+L +++E GYV
Sbjct: 661 GQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYV 720
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D T++I ++ + KE L HSEKLA NLRVC DCH + I
Sbjct: 721 PD-TNLILGLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYI 779
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S V REI+VRD +RFH+FK+G CSCGDYW
Sbjct: 780 SLVTGREIIVRDMQRFHHFKNGACSCGDYW 809
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 154/502 (30%), Positives = 257/502 (51%), Gaps = 39/502 (7%)
Query: 17 DKHSTNTNLTTLFNKY------------VDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
+H T L +LF +Y +DK + +++ A+ D +AL+ F M
Sbjct: 67 QEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRM 126
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
R + P F +K C +L GK+ H GF D+F + L +MY+KC ++
Sbjct: 127 RDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQV 186
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
+ARK+FD +P+ R++VSW +++ GY QN AR AL + + EE N+
Sbjct: 187 HEARKVFDRMPE--RDLVSWNTIVAGYSQNGMARMALEMVN-LMCEE-----------NL 232
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
+ I SVL A S + + + + HG+ ++ GFDS V + L+D YA+ G + +R
Sbjct: 233 KPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARL 292
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
+FDGM+E++ V+WNS+I Y QN EA+ +F +M+ VK V++ L A A LG
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDE-GVKPTDVSVMGALHACADLG 351
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L G+ IH ++++L+ +V V S+I MYCKC +VD A F +++ + + SW AMI
Sbjct: 352 DLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMIL 411
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
G+ + R EAL+ F +M V+P+ T+VSV++A + + W++ + ++
Sbjct: 412 GFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRNCLD 470
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
V +VD+ + G + A LI M + W +++ H +G+ AA +
Sbjct: 471 KNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTH---GIGK-AALE 525
Query: 485 LFE------LEPNNCGYHVLLS 500
LFE + PN + ++S
Sbjct: 526 LFEEMQKGTIRPNGVTFLSVIS 547
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 204/389 (52%), Gaps = 24/389 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIF--GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
++ CS+L +L H IF G +++ + L+ ++ + G + +A ++F+ I ++
Sbjct: 44 LERCSSLKELR-----HILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKK 98
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ N++ +T ML G+ + + +AL F D V +L
Sbjct: 99 L-NVLYYT-MLKGFAKVSDLDKALKFFVRM------------RDDEVEPVVYNFTYLLKV 144
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C V + HG ++K GF ++ L + YA+ V +RKVFD M E+D V+W
Sbjct: 145 CGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSW 204
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N+I+A Y+QNG+A AL++ + M + ++K + +T+ +VL A++ L ++R+GK IH +
Sbjct: 205 NTIVAGYSQNGMARMALEMVNLMCEE-NLKPSFITIVSVLPAVSALRLIRIGKEIHGYAM 263
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ + V + T+++DMY KCG + AR F+ M E+NV SW +MI Y + +EA+
Sbjct: 264 RAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMV 323
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
+F KM+ GV+P ++ + L AC+ G ++ G +++ + E ++ V ++ +
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELELDRNVSVVNSLISMY 382
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ ++ A + ++ + V W +++
Sbjct: 383 CKCKEVDTAASMFGKLQSRT-IVSWNAMI 410
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 156/314 (49%), Gaps = 17/314 (5%)
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ K G E L+ + R G VD + +VF+ + +K V + +++ +A+ +
Sbjct: 59 LIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDK 118
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL F +M + +V+ + +L LR+GK IH ++K + T +
Sbjct: 119 ALKFFVRM-RDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+MY KC QV ARK F++M E+++ SW ++AGY + AR AL++ M + ++P++I
Sbjct: 178 NMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFI 237
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYD 448
T VSVL A S L++ G H + + G + +VD+ + G LK A
Sbjct: 238 TIVSVLPAVSALRLIRIGKEI-----HGYAMRAGFDSLVNIATALVDMYAKCGSLKTARL 292
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--LEPNNCGYHVLLSNIYANA 506
L +GM ++ + V W S++ A ++N + +K+ + ++P + ++ ++A A
Sbjct: 293 LFDGM-LERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVS---VMGALHACA 348
Query: 507 GRWEDVERTRSLMK 520
D+ER R + K
Sbjct: 349 D-LGDLERGRFIHK 361
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 22/253 (8%)
Query: 7 SSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK 66
S V+S++S K ++F K + + SWN++I A+ G +EAL FS M+
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGK-LQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQA 431
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
++ P T+ I + + L H K H ++VFV++AL+DMY+KCG +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMI 491
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
AR +FD + + R++ +W +M+ GY + + AL LF EE + G N
Sbjct: 492 ARLIFDMMSE--RHVTTWNAMIDGYGTHGIGKAALELF-----EEMQKGTIRPN------ 538
Query: 187 DSVAIASVLSACSRVTVNGVTE-GAHGF-VIKRGFDSEVGVGN--TLIDAYARGGHVDVS 242
V SV+SACS +G+ E G F ++K + E + + ++D R G ++ +
Sbjct: 539 -GVTFLSVISACSH---SGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEA 594
Query: 243 RKVFDGMIEKDAV 255
M K AV
Sbjct: 595 WDFIMQMPVKPAV 607
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 268/666 (40%), Positives = 381/666 (57%), Gaps = 68/666 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ WN+++ A D V AL + M L P +FP +KSC+ G
Sbjct: 24 IQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEG 83
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR--------------- 137
+Q H Q G D +V ++LI MY++ G L DARK+FD R
Sbjct: 84 RQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASR 143
Query: 138 --------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
R++VSW +M+TGYV+N EAL LFKE + N
Sbjct: 144 GDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMM------------RTN 191
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFV----IKRGFDSEVGVGNTLIDAYARGGHV 239
V D + SV+SAC++ + H +V GF S + + N LID Y++ G V
Sbjct: 192 VRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDV 251
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+ + +F+G+ KD V+WN++I Y L EAL +F +M++S + N VTL +VL A
Sbjct: 252 ETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECP-NDVTLLSVLPA 310
Query: 300 IAHLGVLRLGKCIH---DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
AHLG + +G+ IH D+ +K E+ + TS+IDMY KCG ++ A + FN M +++
Sbjct: 311 CAHLGAIDIGRWIHVYIDKKLKGVTNETSL-RTSLIDMYAKCGDIEAAHQVFNSMLYRSL 369
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW AMI G+ MH RA A DLF +M V P+ ITFV +LSACSH+GL+ G +
Sbjct: 370 SSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKS 429
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M ++N+ P +EHYGCM+DLLG +G KEA ++I M ++ D V+W SLL AC+ H N++
Sbjct: 430 MTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLE 489
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
L E A+KL ++EP N G +VLLSNIYA AGRWEDV R R ++ + + K PG S +E+
Sbjct: 490 LAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVD 549
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
VH F++GDK HP+ +IY LEE++V+L+E G+ D + V+ ++++E KE LR HSE
Sbjct: 550 SVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSE 609
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLRVC +CH +LISK+ REIV RD RFH+F+DG+C
Sbjct: 610 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVC 669
Query: 639 SCGDYW 644
SC DYW
Sbjct: 670 SCCDYW 675
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 36/258 (13%)
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VF+ + E + + WN+++ +A + AL+++ +MV + N+ + +L + A
Sbjct: 20 VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLP-NSYSFPFLLKSCAKSK 78
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD---------------------- 342
G+ IH QV+K+ V TS+I MY + G ++
Sbjct: 79 AFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALIT 138
Query: 343 ---------LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
ARK F+++ E++V SW AMI GY + R EAL+LF +M++ VRP+ T
Sbjct: 139 GYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGT 198
Query: 394 FVSVLSACSHAGLVQEGWH---WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
VSV+SAC+ +G ++ G W++ + ++ ++DL + G ++ A+ L
Sbjct: 199 LVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLF 258
Query: 451 EGMKVKADFVVWGSLLGA 468
EG+ K D V W +L+G
Sbjct: 259 EGLSCK-DVVSWNTLIGG 275
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
A F ++E N+ W M+ G+ AL+++ +M+ G PN +F +L +C+
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGVEHY--GCMVDLLGRAGKLKEA 446
+ +EG + G++ Y ++ + R G L++A
Sbjct: 77 SKAFEEG---RQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDA 118
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 249/629 (39%), Positives = 382/629 (60%), Gaps = 35/629 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V +WN++++ L R + EA+ F M + T + C L D H
Sbjct: 134 DVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMH 193
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A G ++FV +A+ID+Y K G L + RK+FD + R ++V+W S+++G+ Q
Sbjct: 194 LYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSR--DLVTWNSIISGHEQGGQ 251
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
A+ +F CG + +++AS ++ C + H ++++
Sbjct: 252 VASAVEMF---------CGMRDSGVSPDVLTLLSLASAIAQCGDICGG---RSVHCYMVR 299
Query: 217 RGFD-SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
RG+D ++ GN ++D YA+ ++ ++++FD M +DAV+WN++I Y QNGLA+EA+
Sbjct: 300 RGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIH 359
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
V+D M K +K T +VL A +HLG L+ G +H IK L V VGT +ID+Y
Sbjct: 360 VYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLY 419
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG++D A F Q ++ W A+I+G G+H +AL LF +M + G+ P+++TFV
Sbjct: 420 AKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFV 479
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
S+L+ACSHAGLV +G ++ N M + I+P +HY CMVD+ GRAG+L +A+D I M +
Sbjct: 480 SLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPI 539
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
K D +WG+LLGACRIH NV++G++A++ LFEL+P N GY+VL+SN+YA G+W+ V+
Sbjct: 540 KPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEV 599
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE--HPQHEKIYEYLEELNVKLQEVGYVT 573
RSL++ + L KTPG+S +E++ V+ F G++ HPQHE+I L +L K++ +GYV
Sbjct: 600 RSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVP 659
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
D + V+ DV+++EKE L HSE+LA NLRVCGDCH + IS
Sbjct: 660 DYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYIS 719
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
K+ +REI+VRDS RFH+FKDG CSCGD+W
Sbjct: 720 KITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 214/405 (52%), Gaps = 31/405 (7%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHR-DVFVSSALIDMYSKCGELSDARKLFDE 133
TFP ++ A + Q H A G R D F S AL+ Y + G + DA + FDE
Sbjct: 73 TFPPLLR---AAQGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDE 129
Query: 134 IPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
+ R R++ +W +ML+G +N A EA+ LF ++E V D+V ++S
Sbjct: 130 M--RHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVME------------GVAGDAVTVSS 175
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
VL C + + H + +K G D E+ V N +ID Y + G ++ RKVFDGM +D
Sbjct: 176 VLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRD 235
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
VTWNSII+ + Q G A A+++F M + + V + +TL ++ AIA G + G+ +H
Sbjct: 236 LVTWNSIISGHEQGGQVASAVEMFCGM-RDSGVSPDVLTLLSLASAIAQCGDICGGRSVH 294
Query: 314 DQVIKMDLE-ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
+++ + +I G +I+DMY K +++ A++ F+ M ++ SW +I GY + A
Sbjct: 295 CYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLA 354
Query: 373 REALDLFYKMIK-AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE--- 428
EA+ ++ M K G++P TFVSVL A SH G +Q+G T H +I+ G+
Sbjct: 355 SEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQG-----TRMHALSIKTGLNLDV 409
Query: 429 HYG-CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ G C++DL + GKL EA L E ++ W +++ +H
Sbjct: 410 YVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTG-PWNAVISGVGVH 453
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 258/649 (39%), Positives = 397/649 (61%), Gaps = 43/649 (6%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP 77
++ N LF++ + ++ SWN++I+ + G++ EAL +R + S
Sbjct: 197 RYGAVVNARILFDE-MPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMDSVTVVSL-- 253
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
+ +C+ D + G H + G ++FVS+ LID+Y++ G L D +K+FD +
Sbjct: 254 --LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRM--Y 309
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE--ESECGGASENSDNVFVDSVAIASVL 195
+R+++SW S++ Y N+ A+LLF+E L + +C + +++AS+L
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDC-----------LTLISLASIL 358
Query: 196 SACSRVTVNGVTEGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
S + GF +++G F ++ +GN ++ YA+ G VD +R VF+ + KD
Sbjct: 359 SQLGEIRA---CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDV 415
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
++WN+II+ YAQNG A+EA+++++ M + ++ N T +VL A + G LR G +H
Sbjct: 416 ISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLH 475
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+++K L V VGTS+ DMY KCG++D A F Q+ N W +IA +G H
Sbjct: 476 GRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 535
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
+A+ LF +M+ GV+P++ITFV++LSACSH+GLV EG M ++ I P ++HYGCM
Sbjct: 536 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCM 595
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
VDL GRAG+L+ A + I+ M ++ D +WG+LL ACR+H NVDLG+IA++ LFE+EP +
Sbjct: 596 VDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHV 655
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
GYHVLLSN+YA+AG+WE V+ RS+ + L KTPG+S +E+ KV F G++ HP +E
Sbjct: 656 GYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 715
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------- 599
++Y L L+ KL+ VGYV D V+ DV+ +EKE L HSE+LA
Sbjct: 716 EMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTI 775
Query: 600 ----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH+V + ISK+ +REI+VRDS RFH+FK+G+CSCGDYW
Sbjct: 776 RIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 266/504 (52%), Gaps = 42/504 (8%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS-SMRKL 67
+S+ + N+ + N L ++ +V++WN +I+ R G S E +R FS M
Sbjct: 88 ISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSS 147
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
L P TFP +K+C + D G + H A FGF DV+V+++LI +Y + G + +A
Sbjct: 148 GLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNA 204
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV-FV 186
R LFDE+P R++ SW +M++GY Q+ NA+EAL L SD + +
Sbjct: 205 RILFDEMPT--RDMGSWNAMISGYCQSGNAKEALTL-----------------SDGLRAM 245
Query: 187 DSVAIASVLSACSRVT--VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
DSV + S+LSAC+ GVT H + IK G +SE+ V N LID YA G + +K
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVT--IHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQK 303
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VFD M +D ++WNSII Y N A+ +F +M + + ++ + +TL ++ ++ LG
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEM-RLSRIQPDCLTLISLASILSQLG 362
Query: 305 VLRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
+R + + ++ E + +G +++ MY K G VD AR FN + K+V SW +I
Sbjct: 363 EIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTII 422
Query: 364 AGYGMHCRAREALDLFYKMIKAG--VRPNYITFVSVLSACSHAGLVQEGWHW---LNTMG 418
+GY + A EA++++ M + G + N T+VSVL ACS AG +++G L G
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 482
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
++ G + D+ G+ G+L +A L + + + V W +L+ H + +
Sbjct: 483 LYLDVFVGTS----LADMYGKCGRLDDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKA 537
Query: 479 EIAAKKLFE--LEPNNCGYHVLLS 500
+ K++ + ++P++ + LLS
Sbjct: 538 VMLFKEMLDEGVKPDHITFVTLLS 561
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 130/257 (50%), Gaps = 19/257 (7%)
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
V + L++ Y G+V ++R FD + +D WN +I+ Y + G ++E + F +
Sbjct: 86 VCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFML 145
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
S+ ++ + T +VL A ++ G IH +K V V S+I +YC+ G V
Sbjct: 146 SSGLQPDYRTFPSVLKACRNV---TDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVV 202
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP-NYITFVSVLSAC 401
AR F++M +++ SW AMI+GY A+EAL L G+R + +T VS+LSAC
Sbjct: 203 NARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTL-----SDGLRAMDSVTVVSLLSAC 257
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
+ AG G H ++I+ G+E ++DL G LK+ + + M V+
Sbjct: 258 TEAGDFNRG-----VTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVR- 311
Query: 458 DFVVWGSLLGACRIHKN 474
D + W S++ A +++
Sbjct: 312 DLISWNSIIKAYELNEQ 328
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 89/167 (53%), Gaps = 7/167 (4%)
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L+ KC+H +++ + ++V + ++++YC G V LAR F+ + ++V +W MI+G
Sbjct: 67 LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISG 126
Query: 366 YGMHCRAREALDLF-YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
YG + E + F M+ +G++P+Y TF SVL AC + V +G + ++ + +F
Sbjct: 127 YGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDG-NKIHCLALKFGFM 182
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL-GACR 470
V ++ L R G + A L + M + D W +++ G C+
Sbjct: 183 WDVYVAASLIHLYCRYGAVVNARILFDEMPTR-DMGSWNAMISGYCQ 228
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/638 (40%), Positives = 376/638 (58%), Gaps = 43/638 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ +WN+V++ L + +EAL M + P T + +CS L L +GK+ H
Sbjct: 262 DLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELH 321
Query: 97 QQAFIFG-FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
A G + FV SAL+DMY C ++ ++FD + R I W +M+TGY QN+
Sbjct: 322 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDR--KIGLWNAMITGYAQNE 379
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
EALLLF E E S + +S +A V+ AC R E HGFV+
Sbjct: 380 YDEEALLLFIEM-----------EESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVV 428
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
KRG D + V N L+D Y+R G +D+++++F M ++D VTWN+II Y + +AL
Sbjct: 429 KRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALL 488
Query: 276 VFDQM----------VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+ +M +K N++TL +L + A L L GK IH IK +L V
Sbjct: 489 MLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 548
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VG++++DMY KCG + ++RK F+Q+ +NV +W ++ YGMH +++A+D+ M+
Sbjct: 549 AVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQ 608
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
GV+PN +TF+SV +ACSH+G+V EG M ++ +EP +HY C+VDLLGRAG++KE
Sbjct: 609 GVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKE 668
Query: 446 AYDLIEGMKVKADFV-VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
AY LI + D W SLLGACRIH N+++GEIAA+ L +LEPN ++VLL+NIY+
Sbjct: 669 AYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 728
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
+AG W R MK + + K PG S +E +VH F+ GD HPQ EK+ YLE L
Sbjct: 729 SAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWE 788
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
++++ GY+ D + V+H+V+++EKE+ L HSEKLA NLRVC D
Sbjct: 789 RMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCND 848
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH + ISKVVDREI++RD +RFH+FK+G CSCGDYW
Sbjct: 849 CHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 226/462 (48%), Gaps = 33/462 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL- 86
+F++ ++N V SWNS+I+ L AL AF M + P+ T +CS
Sbjct: 151 VFDRISERNQV-SWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFP 209
Query: 87 --HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
L GKQ H G + F+ + L+ MY K G+L+ ++ L R++V+W
Sbjct: 210 MPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEG--RDLVTW 266
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++L+ QN+ EAL +E +LE E D I+SVL ACS + +
Sbjct: 267 NTVLSSLCQNEQFLEALEYLREMVLEGVE------------PDGFTISSVLPACSHLEML 314
Query: 205 GVTEGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ H + +K G D VG+ L+D Y V +VFDGM ++ WN++I
Sbjct: 315 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITG 374
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YAQN EAL +F +M +S + N+ T++ V+ A G + IH V+K L+
Sbjct: 375 YAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDR 434
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM- 382
V +++DMY + G++D+A++ F +M+++++ +W +I GY R +AL + +KM
Sbjct: 435 DRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQ 494
Query: 383 ----------IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC 432
+ ++PN IT +++L +C+ + +G ++ + N+ V
Sbjct: 495 ILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSA 553
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
+VD+ + G L+ + + + + ++ + + W ++ A +H N
Sbjct: 554 LVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGN 594
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 215/436 (49%), Gaps = 32/436 (7%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
W ++ R EA+ + M L + P FP +K+ + L D+ GKQ H +
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 101 IFGFHRD-VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
FG+ D V V++ L+++Y KCG+ K+FD I + RN VSW S+++ +
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE--RNQVSWNSLISSLCSFEKWEM 178
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV-NGVTEG--AHGFVIK 216
AL F+ L E+ E S + SV ACS + G+ G H + ++
Sbjct: 179 ALEAFRCMLDEDVE------------PSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLR 226
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
+G + + NTL+ Y + G + S+ + +D VTWN++++ QN EAL+
Sbjct: 227 KG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEY 285
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMY 335
+MV V+ + T+S+VL A +HL +LR GK +H +K L+E+ VG++++DMY
Sbjct: 286 LREMVLE-GVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 344
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK-AGVRPNYITF 394
C C QV + F+ M ++ + W AMI GY + EAL LF +M + AG+ N T
Sbjct: 345 CNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTM 404
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLI 450
V+ AC +G + H F ++ G++ ++D+ R GK+ A +
Sbjct: 405 AGVVPACVRSGAFSK-----KEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIF 459
Query: 451 EGMKVKADFVVWGSLL 466
M+ + D V W +++
Sbjct: 460 GKMEDR-DLVTWNTII 474
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%), Gaps = 10/241 (4%)
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
W ++ ++ L EA+ + M+ +K + A+L A+A L + LGK IH V
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMI-VLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHV 119
Query: 317 IKMDLE-ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
K +SV V +++++Y KCG K F+++ E+N SW ++I+ + A
Sbjct: 120 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 179
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH---YGC 432
L+ F M+ V P+ T VSV ACS+ + EG + H + + G +
Sbjct: 180 LEAFRCMLDEDVEPSSFTLVSVALACSNFPM-PEGL-LMGKQVHAYGLRKGELNSFIINT 237
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA-CRIHKNVDLGEIAAKKLFE-LEP 490
+V + G+ GKL + L+ + + D V W ++L + C+ + ++ E + + E +EP
Sbjct: 238 LVAMYGKMGKLASSKVLLGSFEGR-DLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEP 296
Query: 491 N 491
+
Sbjct: 297 D 297
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/666 (40%), Positives = 387/666 (58%), Gaps = 66/666 (9%)
Query: 30 NKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDL 89
N+ K+NVF WNS+I + + +L FS M + P TFP KSC+
Sbjct: 88 NQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKAT 147
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE-------------------------- 123
H GKQ H A H + V +++I MY+ GE
Sbjct: 148 HEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGY 207
Query: 124 -----LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
L DAR+LFDEIP ++++VSW +M++GYVQ+ EA++ F E ++E+
Sbjct: 208 VSQGCLDDARRLFDEIP--VKDVVSWNAMISGYVQSGRFEEAIVCFYE--MQEA------ 257
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
NV + + VLSAC + + +V GF S + + N LID Y + G
Sbjct: 258 ----NVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGE 313
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
D++R++FDG+ EKD ++WN++I Y+ L EAL +F+ M++S +VK N VT +L
Sbjct: 314 TDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRS-NVKPNDVTFLGILH 372
Query: 299 AIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A A LG L LGK +H + K + + + TS+IDMY KCG ++ A + F M +N+
Sbjct: 373 ACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLA 432
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGV-RPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW AM++G+ MH A AL LF +M+ G+ RP+ ITFV VLSAC+ AGLV G + +
Sbjct: 433 SWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRS 492
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M ++ I P ++HYGCM+DLL RA K +EA L++ M+++ D +WGSLL AC+ H V+
Sbjct: 493 MIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVE 552
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
GE A++LF+LEP N G VLLSNIYA AGRW+DV R R+ + ++ + K PG + +E+
Sbjct: 553 FGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEID 612
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
G VH FLVGDK HP+ IY+ L E++ L+E G+V + + V++D+D+E KE L HSE
Sbjct: 613 GDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSE 672
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLRVCG+CH+ +LISK+ +REI+ RD RFH+FKDG C
Sbjct: 673 KLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFC 732
Query: 639 SCGDYW 644
SC D W
Sbjct: 733 SCNDCW 738
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 197/439 (44%), Gaps = 55/439 (12%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQRIR-NIVSW 144
++++ KQ H G + VFV S LI S G+LS A LF+E Q + N+ W
Sbjct: 40 NINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIW 99
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS--RVT 202
S++ GY + + +L LF L G NS + +C+ + T
Sbjct: 100 NSLIRGYSLSSSPLSSLHLFSRMLYY-----GVQPNSH-------TFPFLFKSCTKAKAT 147
Query: 203 VNGVTEGAHGFVIKRGFDSEV---------GVG--------------------NTLIDAY 233
G AH + F+ V VG LI Y
Sbjct: 148 HEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGY 207
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
G +D +R++FD + KD V+WN++I+ Y Q+G EA+ F +M + +V N T+
Sbjct: 208 VSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEM-QEANVLPNKSTM 266
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
VL A H LGK I V ++ + ++IDMYCKCG+ D+AR+ F+ ++E
Sbjct: 267 VVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEE 326
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
K+V SW MI GY EAL LF M+++ V+PN +TF+ +L AC+ G + G W
Sbjct: 327 KDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLG-KW 385
Query: 414 LNT-MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++ + + ++D+ + G ++ A + M + + W ++L +H
Sbjct: 386 VHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR-NLASWNAMLSGFAMH 444
Query: 473 KNVD-----LGEIAAKKLF 486
+ + E+ K LF
Sbjct: 445 GHAERALALFSEMVNKGLF 463
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 256/628 (40%), Positives = 386/628 (61%), Gaps = 36/628 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N F N+++ A G S EA+ + M+++ + T+P +K C++ G+ H
Sbjct: 96 NSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVH 155
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Q GF D+FV +AL+DMY+KCGE+ DA ++FD + IR++V WT+M+T Y Q +
Sbjct: 156 GQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRM--LIRDVVCWTAMITLYEQAER 213
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+AL+LF++ + EE G D + SV SA ++ + HG+ +
Sbjct: 214 PLKALMLFRK-MQEEGFLG-----------DEITAISVASAVGQLGDGRMAISVHGYAVL 261
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
GF +V VGN+++ YA+ G+V+ +R VFD M E++ ++WNS+++ Y QNG +AL +
Sbjct: 262 NGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSL 321
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F+QM ++++ N VT ++ A ++LG LG+ +H+ VI ++ + +I+DMY
Sbjct: 322 FNQM-QASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYM 380
Query: 337 KCGQVDLARKAFN--QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
KCG +D A + FN ++ E++V SW +I+GYG+H +EAL+LF +M GV PN ITF
Sbjct: 381 KCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITF 440
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
S+LSACSHAGL+ EG M + ++ P ++HY CMVD+LGRAG L EA+ LI+ +
Sbjct: 441 TSILSACSHAGLIDEGRKCFADMT-KLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIP 499
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
+ VWG+LL ACRIH N +LGEIAA LF+LEP + GY+VL+SNIYA + +W++VE
Sbjct: 500 SRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEM 559
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTD 574
R MK+R L K FS++E +VH F D+ P + ++Y +E L ++++ VGYV D
Sbjct: 560 VRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPD 619
Query: 575 MTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISK 616
++ V+HDV+ E+KE L HSEKLA NLRVC DCH + IS
Sbjct: 620 LSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISS 679
Query: 617 VVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ R+I+VRD RFH+F+ G CSCGDYW
Sbjct: 680 IYGRKIIVRDGNRFHHFQGGRCSCGDYW 707
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 217/462 (46%), Gaps = 32/462 (6%)
Query: 52 GDSVEALRAFSSMRK-LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF--HRDV 108
G AL S K L+L + ++ C++L L K H GF H
Sbjct: 3 GLKSRALHHLSHTHKVLALPSLHHFYDHLLQCCTSLTTL---KLIHSSLSTRGFLLHTPH 59
Query: 109 FVSSALIDMYSKCGELSDARKLFD------EIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
F++ LI +YSK G+L AR LFD + N +ML Y + EA+
Sbjct: 60 FLAR-LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAID 118
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE 222
L+ ++ G V++ VL C+ E HG V++ GF S+
Sbjct: 119 LY--IYMQRMGVG----------VNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSD 166
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
+ V L+D YA+ G + + +VFD M+ +D V W ++I +Y Q +AL +F +M +
Sbjct: 167 LFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKM-Q 225
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
+ +T +V A+ LG R+ +H + V VG SI+ MY KCG V+
Sbjct: 226 EEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVE 285
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
AR F++M+E+N SW +M++GY + R +AL LF +M + PN +T + ++SACS
Sbjct: 286 RARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACS 345
Query: 403 HAGLVQEGWHWLN-TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV-KADFV 460
+ G G N + + +I+ + + ++D+ + G L A ++ ++ + D
Sbjct: 346 YLGSKHLGRKLHNFVISSKMDIDTTLRN--AIMDMYMKCGDLDTAVEMFNNCELGERDVS 403
Query: 461 VWGSLLGACRIHKN-VDLGEIAAKKLFE-LEPNNCGYHVLLS 500
W L+ +H + + E+ ++ E +EPN+ + +LS
Sbjct: 404 SWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILS 445
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 17/215 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ ++N + SWNS+++ + G +AL F+ M+ P T + +CS L
Sbjct: 290 VFDRMEERNGI-SWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLG 348
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
H G++ H D + +A++DMY KCG+L A ++F+ R++ SW +
Sbjct: 349 SKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVL 408
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY + + +EAL LF +E E + + S+LSACS + +
Sbjct: 409 ISGYGVHGHGKEALELFSRMQVEGVE------------PNDITFTSILSACSHAGL--ID 454
Query: 208 EGAHGF--VIKRGFDSEVGVGNTLIDAYARGGHVD 240
EG F + K E+ ++D R G ++
Sbjct: 455 EGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLN 489
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/638 (41%), Positives = 381/638 (59%), Gaps = 37/638 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ V KN+ F WNS+I A AL + M P T+P +K+C L
Sbjct: 80 IFDQIVLKNS-FLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLL 138
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G++ H + G DV+V ++++ MY K G++ AR +FD + +R++ SW +M
Sbjct: 139 LREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRM--LVRDLTSWNTM 196
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G+V+N AR A +F + D D + ++LSAC V V
Sbjct: 197 MSGFVKNGEARGAFEVFGDM------------RRDGFVGDRTTLLALLSACGDVMDLKVG 244
Query: 208 EGAHGFVIKRGFDSEVGVG---NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
+ HG+V++ G V G N++ID Y V +RK+F+G+ KD V+WNS+I+ Y
Sbjct: 245 KEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGY 304
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
+ G A +AL++F +MV V + VT+ +VL A + LRLG + V+K +
Sbjct: 305 EKCGDAFQALELFGRMVVVGAVP-DEVTVISVLAACNQISALRLGATVQSYVVKRGYVVN 363
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V+VGT++I MY CG + A + F++M EKN+ + T M+ G+G+H R REA+ +FY+M+
Sbjct: 364 VVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLG 423
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
GV P+ F +VLSACSH+GLV EG M ++++EP HY C+VDLLGRAG L
Sbjct: 424 KGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLD 483
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
EAY +IE MK+K + VW +LL ACR+H+NV L I+A+KLFEL P+ +V LSNIYA
Sbjct: 484 EAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYA 543
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
RWEDVE R+L+ RRL K P +S VEL VH F VGD H Q + IY L++LN
Sbjct: 544 AERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNE 603
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
+L++ GY D + V++DV++E KE L HSE+LA NLRVCGD
Sbjct: 604 QLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGD 663
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CHTVI++ISK+ +REI++RD RFH+F+DGLCSCG YW
Sbjct: 664 CHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 125/249 (50%), Gaps = 14/249 (5%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+ L YA GH+ ++ +FD ++ K++ WNS+I YA N + AL ++ +M+
Sbjct: 60 LATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFG 119
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
K + T VL A L + +G+ +H V+ LEE V VG SI+ MY K G V+ A
Sbjct: 120 Q-KPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAA 178
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R F++M +++ SW M++G+ + AR A ++F M + G + T +++LSAC
Sbjct: 179 RVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDV 238
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGC-------MVDLLGRAGKLKEAYDLIEGMKVKA 457
++ G H + + G C ++D+ + A L EG++VK
Sbjct: 239 MDLKVGKEI-----HGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVK- 292
Query: 458 DFVVWGSLL 466
D V W SL+
Sbjct: 293 DVVSWNSLI 301
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
L + + T + Y CG + A+ F+Q+ KN W +MI GY + AL L+
Sbjct: 54 LRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYL 113
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGW--HWLNTMGHEFNIEPGVEHYGCMVDLLG 438
KM+ G +P+ T+ VL AC L + G H L +G +E V ++ +
Sbjct: 114 KMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVG---GLEEDVYVGNSILSMYF 170
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ G ++ A + + M V+ D W +++
Sbjct: 171 KFGDVEAARVVFDRMLVR-DLTSWNTMM 197
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 271/662 (40%), Positives = 379/662 (57%), Gaps = 70/662 (10%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N+F WN++I + +L FS M L P TFP KSC+ H KQ H
Sbjct: 91 NIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLH 150
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGEL-------------------------------S 125
A H V ++LI MYS+ GEL
Sbjct: 151 AHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVD 210
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
DAR+LFDEIP +++VSW +M+ GYVQ+ EAL F ++E++ V
Sbjct: 211 DARRLFDEIPA--KDVVSWNAMIAGYVQSGRFEEALACFTR--MQEAD----------VS 256
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+ + SVLSAC + + + +V RGF + + N L+D Y++ G + +RK+
Sbjct: 257 PNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKL 316
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FDGM +KD + WN++I Y L EAL +F+ M++ +V N VT AVL A A LG
Sbjct: 317 FDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRE-NVTPNDVTFLAVLPACASLGA 375
Query: 306 LRLGKCIHDQVIKMDLE-----ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
L LGK +H + K +L+ +V + TSII MY KCG V++A + F M +++ SW
Sbjct: 376 LDLGKWVHAYIDK-NLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWN 434
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
AMI+G M+ A AL LF +MI G +P+ ITFV VLSAC+ AG V+ G + ++M +
Sbjct: 435 AMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKD 494
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
+ I P ++HYGCM+DLL R+GK EA L+ M+++ D +WGSLL ACRIH V+ GE
Sbjct: 495 YGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEY 554
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
A++LFELEP N G +VLLSNIYA AGRW+DV + R+ + ++ + K PG + +E+ G VH
Sbjct: 555 VAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVH 614
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA- 599
FLVGDK HPQ E I+ L+E++ L+E G+V D + V++D+D+E KE L HSEKLA
Sbjct: 615 EFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAI 674
Query: 600 -----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
NLRVC +CH+ +LISK+ +REI+ RD RFH+FKDG CSC D
Sbjct: 675 AFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCND 734
Query: 643 YW 644
W
Sbjct: 735 RW 736
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 161/356 (45%), Gaps = 46/356 (12%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQRIRNIVSWT 145
D+ S KQ H G H +F S LI+ S +LS A LF I + NI W
Sbjct: 37 DIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWN 96
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+++ + +L LF + L ++ +S S+ +C++
Sbjct: 97 TLIRAHSLTPTPTSSLHLFSQML------------HSGLYPNSHTFPSLFKSCAKSKATH 144
Query: 206 VTEGAHGFVIKRGFD-------------SEVG------------------VGNTLIDAYA 234
+ H +K S+VG LI Y
Sbjct: 145 EAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYV 204
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
GHVD +R++FD + KD V+WN++IA Y Q+G EAL F +M + DV N T+
Sbjct: 205 SEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRM-QEADVSPNQSTMV 263
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
+VL A HL L LGK I V +++ + +++DMY KCG++ ARK F+ M++K
Sbjct: 264 SVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDK 323
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
+V W MI GY EAL LF M++ V PN +TF++VL AC+ G + G
Sbjct: 324 DVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLG 379
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/624 (40%), Positives = 384/624 (61%), Gaps = 33/624 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SWN++I+ + G++ AL + M+ + T + C+ D+ +G H
Sbjct: 186 DVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIH 245
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G DVFVS+ALI+MYSK G L DA+ +FD++ +R++VSW S++ Y QN++
Sbjct: 246 LHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQM--EVRDLVSWNSIIAAYEQNND 303
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
AL FK L GG + D + + S+ S S+++ ++ GFVI+
Sbjct: 304 PSTALRFFKGMQL-----GG-------IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIR 351
Query: 217 RGF-DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
R + D +V +GN L++ YA+ G+++ + VFD + KD ++WN+++ Y QNGLA+EA+D
Sbjct: 352 REWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAID 411
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
++ M + D N T +++ A +H+G L+ G IH ++IK L V V T +ID+Y
Sbjct: 412 AYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLY 471
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG+++ A F ++ W A+IA G+H R EAL LF M+ V+ ++ITFV
Sbjct: 472 GKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFV 531
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
S+LSACSH+GLV EG + M E+ I+P ++HYGCMVDLLGRAG L++AY+L+ M +
Sbjct: 532 SLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPI 591
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
+ D +WG+LL AC+I+ N +LG +A+ +L E++ N GY+VLLSNIYAN +WE V +
Sbjct: 592 QPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKV 651
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
RSL ++R L KTPG+S V + K F G++ HP++ +IY+ L+ L+ K++ +GYV D
Sbjct: 652 RSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDY 711
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
+ V D++++EKE L HSE+LA NLRVCGDCH + IS++
Sbjct: 712 SFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRI 771
Query: 618 VDREIVVRDSKRFHYFKDGLCSCG 641
+REIVVRDS RFH+FKDG+CSC
Sbjct: 772 SEREIVVRDSNRFHHFKDGICSCA 795
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 200/379 (52%), Gaps = 15/379 (3%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++++ K+ H +FG +++ +S+ LI++Y G++S +R FD I + +NI SW S+
Sbjct: 34 NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHK--KNIFSWNSI 91
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ YV+ EA+ + S CGG ++ D +L AC + V+G
Sbjct: 92 ISAYVRFGKYHEAMNCVNQLF---SMCGGG-----HLRPDFYTFPPILKACVSL-VDG-- 140
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H V K GF+ +V V +L+ Y+R G +DV+ KVF M KD +WN++I+ + QN
Sbjct: 141 KKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQN 200
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G AA AL V ++M K VK + +T++++L A + G IH V+K L+ V V
Sbjct: 201 GNAAGALGVLNRM-KGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFV 259
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++I+MY K G++ A+ F+QM+ +++ SW ++IA Y + AL F M G+
Sbjct: 260 SNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
RP+ +T VS+ S S + L + ++ V +V++ + G + A+
Sbjct: 320 RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAH 379
Query: 448 DLIEGMKVKADFVVWGSLL 466
+ + + K D + W +L+
Sbjct: 380 TVFDQLPRK-DTISWNTLV 397
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 147/296 (49%), Gaps = 21/296 (7%)
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
S V VN T+ H ++ G + + LI+ Y G + +SR FD + +K+ +WN
Sbjct: 31 SCVNVNA-TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWN 89
Query: 259 SIIAIYAQNGLAAEALDVFDQ---MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
SII+ Y + G EA++ +Q M ++ + T +L A L GK +H
Sbjct: 90 SIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSL---VDGKKVHCC 146
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
V KM E+ V V S++ +Y + G +D+A K F M K+V SW AMI+G+ + A A
Sbjct: 147 VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGA 206
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG-WHWLNTMGHEFNIEPGVEHYGCMV 434
L + +M GV+ + IT S+L C+ + V G L+ + H + + V + ++
Sbjct: 207 LGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN--ALI 264
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG----------ACRIHKNVDLGEI 480
++ + G+L++A + + M+V+ D V W S++ A R K + LG I
Sbjct: 265 NMYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/630 (40%), Positives = 389/630 (61%), Gaps = 34/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V + ++ WN++I + +R + M+ + P TF +K+C G
Sbjct: 60 VSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIG 119
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H Q F +GF +VFV ++L+ MY+K G++S AR +FD++ R +VSWTS+++GYV
Sbjct: 120 KQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDR--TVVSWTSIISGYV 177
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN + EAL +FKE +C NV D +A+ SV++A + V G + HG
Sbjct: 178 QNGDPMEALNVFKEM----RQC--------NVKPDWIALVSVMTAYTNVEDLGQGKSIHG 225
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V K G + E + +L YA+ G V+V+R F+ M + + + WN++I+ YA NG E
Sbjct: 226 LVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEE 285
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+ +F +M+ + +++ +++T+ + +LA A +G L L + + + K + + V T +I
Sbjct: 286 AIKLFREMI-TKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLI 344
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG + LAR F+++ +K+V W+ MI GYG+H +EA+ L+ +M +AGV PN
Sbjct: 345 DMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDG 404
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+ +L+AC ++GLV+EGW + M + IEP +HY C+VDLLGRAG L +AYD I
Sbjct: 405 TFIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMS 463
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M +K VWG+LL AC+IH+ V LGEIAA++LF L+P N G++V LSN+YA+A W V
Sbjct: 464 MPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRV 523
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R +M + L K G S +E+ G + F VGD+ HP+ ++I+E L+ L +L+ GYV
Sbjct: 524 ANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYV 583
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
M SV+HD++ EE E TL HSE+LA NLR C +CH+ I+LI
Sbjct: 584 PHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLI 643
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+VDREI++RD+KRFH+FKDG+CSCGD+W
Sbjct: 644 SKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 134/267 (50%), Gaps = 12/267 (4%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
I+A G V+ + K F + E D + WN+II Y Q + + ++ M + + V
Sbjct: 40 FINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDM-QISQVHP 98
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
N T VL A V +GK IH Q K +V V S++ MY K GQ+ AR F
Sbjct: 99 NCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVF 158
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
+++ ++ V SWT++I+GY + EAL++F +M + V+P++I VSV++A ++ +
Sbjct: 159 DKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLG 218
Query: 409 EG--WHWLNT-MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
+G H L T +G EF EP + + + + G ++ A M+ K + ++W ++
Sbjct: 219 QGKSIHGLVTKLGLEF--EPDI--VISLTTMYAKRGLVEVARFFFNRME-KPNLILWNAM 273
Query: 466 LGACRIHKNVDLGEIAAKKLFELEPNN 492
+ + N GE A K E+ N
Sbjct: 274 ISG---YANNGYGEEAIKLFREMITKN 297
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
++ Q+I L + + I+ G V+ A KAF ++ E ++ W A+I GY
Sbjct: 21 VYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNI 80
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ ++ M + V PN TF+ VL AC
Sbjct: 81 VDAPIRMYMDMQISQVHPNCFTFLYVLKAC 110
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 260/651 (39%), Positives = 384/651 (58%), Gaps = 53/651 (8%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
+ ++ +WNS+I+ ++ +EAL M + P TF + +CS L L +GK
Sbjct: 177 EDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGK 236
Query: 94 QAHQQAF-IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H A + FV SAL+DMY CG++ R +FD + R I W +M+ GY
Sbjct: 237 EIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDR--KIGLWNAMIAGYA 294
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+++ +AL+LF E E + ++ ++ ++S++ A R EG HG
Sbjct: 295 QSEHDEKALMLFIEM-----------EAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHG 343
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+VIKRG ++ + N LID Y+R G + S+++FD M ++D V+WN+II Y G +++
Sbjct: 344 YVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSD 403
Query: 273 ALDVFDQMV---------------KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
AL + +M K K N++TL VL A L L GK IH I
Sbjct: 404 ALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAI 463
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ L V VG++++DMY KCG ++LAR+ F+QM +NV +W +I YGMH + +E+L+
Sbjct: 464 RNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLE 523
Query: 378 LFYKMIKAG-----VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC 432
LF M+ G V+P +TF+++ ++CSH+G+V EG + M +E IEP +HY C
Sbjct: 524 LFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYAC 583
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFV-VWGSLLGACRIHKNVDLGEIAAKKLFELEPN 491
+VDL+GRAGK++EAY L+ M D V W SLLGACRI+ N+++GEIAA+ L +L+P+
Sbjct: 584 IVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPD 643
Query: 492 NCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQ 551
++VLLSNIY++AG W+ R MK + K PG S +E +VH FL GD HPQ
Sbjct: 644 VASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQ 703
Query: 552 HEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------ 599
EK++++LE L+ +L++ GYV D V+HD+D+EEKE L HSEKLA
Sbjct: 704 SEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGT 763
Query: 600 ------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT + ISK+ DREI++RD++RFH+FKDG CSCGDYW
Sbjct: 764 TIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 213/411 (51%), Gaps = 37/411 (9%)
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF--HRDVFVSSALIDMYSKCGELSD 126
+P FP +K+ + + +L+ GKQ H F FG+ V + + L++MY KCG L D
Sbjct: 6 FSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGD 65
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
A K+FD I + R+ VSW S+++ + + A+ F+ L+E E
Sbjct: 66 AYKVFDRITE--RDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFE------------P 111
Query: 187 DSVAIASVLSACSRV-TVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
S + S+ ACS + +G+ G HG ++G N L+ YA+ G +D ++
Sbjct: 112 SSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAK 170
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+ ++D VTWNS+I+ ++QN EAL +F +++ VK + VT ++VL A +HL
Sbjct: 171 SLLVLFEDRDLVTWNSMISSFSQNERFMEAL-MFLRLMVLEGVKPDGVTFASVLPACSHL 229
Query: 304 GVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
+LR GK IH ++ D+ E+ VG++++DMYC CGQV+ R F+ + ++ + W AM
Sbjct: 230 DLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAM 289
Query: 363 IAGYGMHCRAREALDLFYKM-IKAGVRPNYITFVSVLSACSHAGLV--QEGWHWLNTMGH 419
IAGY +AL LF +M AG+ N T S++ A + +EG H
Sbjct: 290 IAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGI-------H 342
Query: 420 EFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ I+ G+E ++D+ R G +K + + + M+ + D V W +++
Sbjct: 343 GYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDR-DIVSWNTII 392
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 230/475 (48%), Gaps = 58/475 (12%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +++ V SWNS+I+ L R + A++AF M P+ T +CS L
Sbjct: 69 VFDRITERDQV-SWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLR 127
Query: 88 D---LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
L GKQ H F G H F ++AL+ MY+K G L DA+ L + R++V+W
Sbjct: 128 KRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLL--VLFEDRDLVTW 184
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
SM++ + QN+ EAL+ + +LE V D V ASVL ACS + +
Sbjct: 185 NSMISSFSQNERFMEALMFLRLMVLE------------GVKPDGVTFASVLPACSHLDLL 232
Query: 205 GVTEGAHGF------VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ H + VI+ F VG+ L+D Y G V+ R VFD ++++ WN
Sbjct: 233 RTGKEIHAYALRTDDVIENSF-----VGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWN 287
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
++IA YAQ+ +AL +F +M + + NA T+S+++ A + + IH VIK
Sbjct: 288 AMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIK 347
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
LE + + ++IDMY + G + +++ F+ M+++++ SW +I Y + R+ +AL L
Sbjct: 348 RGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLL 407
Query: 379 FYKMIK----------------AGVRPNYITFVSVLSACSHAGLVQEG-----WHWLNTM 417
++M + +PN IT ++VL C+ + +G + N +
Sbjct: 408 LHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLL 467
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ + +VD+ + G L A + + M ++ + + W ++ A +H
Sbjct: 468 ASQVTVGSA------LVDMYAKCGCLNLARRVFDQMPIR-NVITWNVIIMAYGMH 515
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/645 (41%), Positives = 378/645 (58%), Gaps = 34/645 (5%)
Query: 19 HSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC 78
H T T+ N+F +N++I + +A+ ++SMR+ P TFP
Sbjct: 47 HFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPF 106
Query: 79 AIKSCSAL-HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
+K+C+ L H H G H GF DVFV + L+ +YSK G L+DARK+FDEIP++
Sbjct: 107 VLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEK 166
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
N+VSWT+++ GY+++ EAL LF+ L E G + DS + +L A
Sbjct: 167 --NVVSWTAIICGYIESGCFGEALGLFRGLL----EMG--------LRPDSFTLVRILYA 212
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
CSRV G++ + G V V +L+D YA+ G ++ +R+VFDGM+EKD V W
Sbjct: 213 CSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCW 272
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
+++I YA NG+ EALDVF +M + +V+ + + V A + LG L LG +
Sbjct: 273 SALIQGYASNGMPKEALDVFFEM-QRENVRPDCYAMVGVFSACSRLGALELGNWARGLMD 331
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ + ++GT++ID Y KCG V A++ F M+ K+ + A+I+G M A
Sbjct: 332 GDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFG 391
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
+F +M+K G++P+ TFV +L C+HAGLV +G + + M F++ P +EHYGCMVDL
Sbjct: 392 VFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQ 451
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
RAG L EA DLI M ++A+ +VWG+LLG CR+HK+ L E K+L ELEP N G++V
Sbjct: 452 ARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYV 511
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
LLSNIY+ + RW++ E+ RS + + + K PG S VE+ G VH FLVGD HP KIYE
Sbjct: 512 LLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYE 571
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
LE L L+E GY V+ DV++EEKE L HSEKLA
Sbjct: 572 KLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVK 631
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH I+L+SKV REI+VRD+ RFH+F +G CSC DYW
Sbjct: 632 NLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 134/449 (29%), Positives = 222/449 (49%), Gaps = 27/449 (6%)
Query: 80 IKSCSA--LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
+K C A L LH KQ H G H+D ++ + L+ A +F + P
Sbjct: 5 LKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPH- 63
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
NI + +++ G V ND R+A+ ++ AS D+ VL A
Sbjct: 64 -PNIFLYNTLIRGMVSNDAFRDAVSVY------------ASMRQHGFAPDNFTFPFVLKA 110
Query: 198 CSRVT-VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
C+R+ V H VIK GFD +V V L+ Y++ G + +RKVFD + EK+ V+
Sbjct: 111 CTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVS 170
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
W +II Y ++G EAL +F +++ ++ ++ TL +L A + +G L G+ I +
Sbjct: 171 WTAIICGYIESGCFGEALGLFRGLLE-MGLRPDSFTLVRILYACSRVGDLASGRWIDGYM 229
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
+ +V V TS++DMY KCG ++ AR+ F+ M EK+V W+A+I GY + +EAL
Sbjct: 230 RESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEAL 289
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM--GHEFNIEPGVEHYGCMV 434
D+F++M + VRP+ V V SACS G ++ G +W + G EF P + ++
Sbjct: 290 DVFFEMQRENVRPDCYAMVGVFSACSRLGALELG-NWARGLMDGDEFLSNPVLGT--ALI 346
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI--HKNVDLGEIAAKKLFELEPNN 492
D + G + +A ++ +GM+ K D VV+ +++ + H G ++P+
Sbjct: 347 DFYAKCGSVAQAKEVFKGMRRK-DCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDG 405
Query: 493 CGYHVLLSNIYANAGRWEDVERTRSLMKN 521
+ LL +AG +D R S M +
Sbjct: 406 NTFVGLLCGC-THAGLVDDGHRYFSGMSS 433
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/630 (40%), Positives = 389/630 (61%), Gaps = 34/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V + ++ WN++I + +R + M+ + P TF +K+C G
Sbjct: 45 VSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIG 104
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H Q F +GF +VFV ++L+ MY+K G++S AR +FD++ R +VSWTS+++GYV
Sbjct: 105 KQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDR--TVVSWTSIISGYV 162
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN + EAL +FKE +C NV D +A+ SV++A + V G + HG
Sbjct: 163 QNGDPMEALNVFKEM----RQC--------NVKPDWIALVSVMTAYTNVEDLGQGKSIHG 210
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V K G + E + +L YA+ G V+V+R F+ M + + + WN++I+ YA NG E
Sbjct: 211 LVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEE 270
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+ +F +M+ + +++ +++T+ + +LA A +G L L + + + K + + V T +I
Sbjct: 271 AIKLFREMI-TKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLI 329
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG + LAR F+++ +K+V W+ MI GYG+H +EA+ L+ +M +AGV PN
Sbjct: 330 DMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDG 389
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+ +L+AC ++GLV+EGW + M + IEP +HY C+VDLLGRAG L +AYD I
Sbjct: 390 TFIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMS 448
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M +K VWG+LL AC+IH+ V LGEIAA++LF L+P N G++V LSN+YA+A W V
Sbjct: 449 MPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRV 508
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R +M + L K G S +E+ G + F VGD+ HP+ ++I+E L+ L +L+ GYV
Sbjct: 509 ANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYV 568
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
M SV+HD++ EE E TL HSE+LA NLR C +CH+ I+LI
Sbjct: 569 PHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLI 628
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+VDREI++RD+KRFH+FKDG+CSCGD+W
Sbjct: 629 SKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 134/267 (50%), Gaps = 12/267 (4%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
I+A G V+ + K F + E D + WN+II Y Q + + ++ M + + V
Sbjct: 25 FINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDM-QISQVHP 83
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
N T VL A V +GK IH Q K +V V S++ MY K GQ+ AR F
Sbjct: 84 NCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVF 143
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
+++ ++ V SWT++I+GY + EAL++F +M + V+P++I VSV++A ++ +
Sbjct: 144 DKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLG 203
Query: 409 EG--WHWLNT-MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
+G H L T +G EF EP + + + + G ++ A M+ K + ++W ++
Sbjct: 204 QGKSIHGLVTKLGLEF--EPDI--VISLTTMYAKRGLVEVARFFFNRME-KPNLILWNAM 258
Query: 466 LGACRIHKNVDLGEIAAKKLFELEPNN 492
+ + N GE A K E+ N
Sbjct: 259 ISG---YANNGYGEEAIKLFREMITKN 282
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
++ Q+I L + + I+ G V+ A KAF ++ E ++ W A+I GY
Sbjct: 6 VYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNI 65
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ ++ M + V PN TF+ VL AC
Sbjct: 66 VDAPIRMYMDMQISQVHPNCFTFLYVLKAC 95
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/653 (38%), Positives = 393/653 (60%), Gaps = 34/653 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
++++S K + T+ +F+ D+N + SW ++I G ++EA + + +M+
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRDRN-IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGC 193
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P + TF + + + L G++ H + G + V ++L+ MY+KCG++S A+
Sbjct: 194 KPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQV 253
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FD++P++ N+V+WT ++ GY Q AL L ++ ++++E V + +
Sbjct: 254 IFDKLPEK--NVVTWTLLIAGYAQQGQVDVALELLEK--MQQAE----------VAPNKI 299
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
S+L C+ + H ++I+ G+ E+ V N LI Y + G + +RK+F +
Sbjct: 300 TYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDL 359
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+D VTW +++ YAQ G EA+D+F +M + +K + +T ++ L + + L+ G
Sbjct: 360 PHRDVVTWTAMVTGYAQLGFHDEAIDLFRRM-QQQGIKPDKMTFTSALTSCSSPAFLQEG 418
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K IH Q++ V + ++++ MY KCG +D AR FNQM E+NV +WTAMI G H
Sbjct: 419 KSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQH 478
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
R REAL+ F +M K G++P+ +TF SVLSAC+H GLV+EG +M ++ I+P VEH
Sbjct: 479 GRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEH 538
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
Y C VDLLGRAG L+EA ++I M + VWG+LL ACRIH +V+ GE AA+ + +L+
Sbjct: 539 YSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLD 598
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
P++ G +V LSNIYA AGR+ED E+ R +M+ R + K PG S +E+ GKVH F V DK H
Sbjct: 599 PDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSH 658
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
P+ ++IY L +L +++E GYV D V+HDVD+E+K TL HSE+LA
Sbjct: 659 PEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPP 718
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCHT + ISKVV REI+ RD+ RFH+F DG+CSCGD+W
Sbjct: 719 GTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 221/458 (48%), Gaps = 48/458 (10%)
Query: 45 IADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF 104
++ L + G EAL ++M F ++ C+ L L G++ H G
Sbjct: 68 VSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 127
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
+ ++ + L+ MY+KCG L+DAR++FD I R RNIVSWT+M+ +V + EA +
Sbjct: 128 QPNRYLENTLLSMYAKCGSLTDARRVFDGI--RDRNIVSWTAMIEAFVAGNQNLEAYKCY 185
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
+ L + D V S+L+A + + V + H + K G + E
Sbjct: 186 ETMKLAGCK------------PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPR 233
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
VG +L+ YA+ G + ++ +FD + EK+ VTW +IA YAQ G AL++ ++M +
Sbjct: 234 VGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKM-QQA 292
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+V N +T +++L L GK +H +I+ + V ++I MYCKCG + A
Sbjct: 293 EVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEA 352
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
RK F + ++V +WTAM+ GY EA+DLF +M + G++P+ +TF S L++CS
Sbjct: 353 RKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSP 412
Query: 405 GLVQEG---WHWLNTMGHEFNI---------------------------EPGVEHYGCMV 434
+QEG L G+ ++ E V + M+
Sbjct: 413 AFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMI 472
Query: 435 DLLGRAGKLKEAYDLIEGMK---VKADFVVWGSLLGAC 469
+ G+ +EA + E MK +K D V + S+L AC
Sbjct: 473 TGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSAC 510
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 124/257 (48%), Gaps = 9/257 (3%)
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV-KSTDVKCNAVTLSAVLLAIAHLGVL 306
G + D + + ++I + G EAL + + M+ + T V + +L A L L
Sbjct: 55 GFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSD--VFRGLLQECARLRSL 112
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
G+ +H ++K ++ + + +++ MY KCG + AR+ F+ ++++N+ SWTAMI +
Sbjct: 113 EQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAF 172
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH-WLNTMGHEFNIEP 425
+ EA + M AG +P+ +TFVS+L+A ++ L+Q G + +EP
Sbjct: 173 VAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEP 232
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
V +V + + G + +A + + + K + V W L+ VD+ +K+
Sbjct: 233 RVG--TSLVGMYAKCGDISKAQVIFDKLPEK-NVVTWTLLIAGYAQQGQVDVALELLEKM 289
Query: 486 FELE--PNNCGYHVLLS 500
+ E PN Y +L
Sbjct: 290 QQAEVAPNKITYTSILQ 306
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/630 (39%), Positives = 386/630 (61%), Gaps = 32/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + VF WN++I +R +AL +S M+ ++P TFP +K+C L L G
Sbjct: 79 LPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMG 138
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H Q F GF DVFV + LI +Y+KC L AR +F+ +P R IVSWT++++ Y
Sbjct: 139 RFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN EAL +F + +V D VA+ SVL+A + + H
Sbjct: 199 QNGEPVEALEIFSQM------------RKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHA 246
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V+K G ++E + +L YA+ G V ++ +FD M + + WN++I+ YA+NG A +
Sbjct: 247 SVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKD 306
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+D+F +M+ + DV+ + +++++ + A A +G L + + + V + D + V + +++I
Sbjct: 307 AIDLFHEMI-NKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALI 365
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DM+ KCG V+ AR F++ +++V W+AMI GYG+H +AREA+ L+ M + GV PN +
Sbjct: 366 DMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDV 425
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+ +L AC+H+G+V+EGW + N M + I P +HY C++DLLGRAG L +AY++I+
Sbjct: 426 TFLGLLIACNHSGMVREGWWFFNRMA-DHKINPQQQHYACIIDLLGRAGHLDQAYEVIKC 484
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M V+ VWG+LL AC+ H++V+LG+ AA++LF ++P+N G++V LSN+YA A W+ V
Sbjct: 485 MPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRV 544
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R MK + L K G S VE+RG++ F VGDK HP++E+I +E + +L+E G+V
Sbjct: 545 AEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 604
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
+ + +HD++ EE E TL HSE++ NLR C +CH +LI
Sbjct: 605 ANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLI 664
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+V REIVVRD+ RFH+FKDG+CSCGDYW
Sbjct: 665 SKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 206/382 (53%), Gaps = 19/382 (4%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H + + G F+ + LI S G+++ AR++FD++P+ + W +++ GY
Sbjct: 38 RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPR--PQVFPWNAIIRGYS 95
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+N++ ++ALL++ + L V DS +L AC ++ + H
Sbjct: 96 RNNHFQDALLMYSKMQLAR------------VSPDSFTFPHLLKACGGLSHLQMGRFVHA 143
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG--MIEKDAVTWNSIIAIYAQNGLA 270
V + GF+++V V N LI YA+ + +R VF+G + E+ V+W +I++ YAQNG
Sbjct: 144 QVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EAL++F QM K DVK + V L +VL A L L G+ IH V+KM LE + S
Sbjct: 204 VEALEIFSQMRK-MDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLIS 262
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+ MY KCGQV A+ F++MK N+ W AMI+GY + A++A+DLF++MI VRP+
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPD 322
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
I+ S +SAC+ G +++ W++ + V ++D+ + G ++ A +
Sbjct: 323 TISITSAISACAQVGSLEQA-RWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVF 381
Query: 451 EGMKVKADFVVWGSLLGACRIH 472
+ + D VVW +++ +H
Sbjct: 382 D-RTLDRDVVVWSAMIVGYGLH 402
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/681 (38%), Positives = 386/681 (56%), Gaps = 68/681 (9%)
Query: 16 VDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRST 75
V H + +LF + N+V WN +I L+ AL + M P T
Sbjct: 72 VSPHGDLSYALSLFKTIRNPNHVI-WNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYT 130
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE------------ 123
FP KSC+ + H GKQ H G + FV ++LI+MY++ GE
Sbjct: 131 FPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSS 190
Query: 124 -------------------LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
L +AR+LFDEIP +R++VSW +M++GY Q+ EA+ F
Sbjct: 191 MRDAVSFTALITGYASKGFLDEARELFDEIP--VRDVVSWNAMISGYAQSGRVEEAMAFF 248
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN-GVTEGAHGFVIKRGFDSEV 223
+E V + + SVLSAC++ + + ++ RG S +
Sbjct: 249 EEM------------RRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNI 296
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
+ N LID Y + G ++ + +F+ + +K+ V+WN +I Y EAL +F +M++S
Sbjct: 297 RLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQS 356
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK--MDLEESVIVGTSIIDMYCKCGQV 341
++ N VT ++L A A+LG L LGK +H V K ++ +V + TS+IDMY KCG +
Sbjct: 357 -NIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDL 415
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+A++ F+ M K++ +W AMI+G+ MH AL LF +M G P+ ITFV VL+AC
Sbjct: 416 AVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTAC 475
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
HAGL+ G + ++M ++ + P + HYGCM+DL GRAG EA L++ M++K D +
Sbjct: 476 KHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAI 535
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKN 521
W SLLGACRIH+ ++L E AK LFELEP N +VLLSNIYA AGRWEDV + R+ + +
Sbjct: 536 WCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLND 595
Query: 522 RRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHD 581
R+ K PG S +E+ VH FLVGDK HPQ +IY+ L+E++++L++ G+V D + V++D
Sbjct: 596 NRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYD 655
Query: 582 VDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIV 623
+D+E KE L HSEKLA NLRVCG+CH+ +LISK+ +REI+
Sbjct: 656 MDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREII 715
Query: 624 VRDSKRFHYFKDGLCSCGDYW 644
RD RFH+FKDG CSC DYW
Sbjct: 716 ARDRNRFHHFKDGSCSCKDYW 736
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 206/435 (47%), Gaps = 60/435 (13%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQR 137
+ +C L L KQ H Q G H F S LI+ S G+LS A LF I R
Sbjct: 35 LSNCKTLQTL---KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTI--R 89
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
N V W M+ G ++ E+ L E+ + G +E ++ F S+ +
Sbjct: 90 NPNHVIWNHMIRGL----SSSESPFLALEYYVHMISSG--TEPNEYTF------PSIFKS 137
Query: 198 CSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGH----------------- 238
C++ + G EG H V+K G + V +LI+ YA+ G
Sbjct: 138 CTK--IRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAV 195
Query: 239 --------------VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+D +R++FD + +D V+WN++I+ YAQ+G EA+ F++M +
Sbjct: 196 SFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEM-RRA 254
Query: 285 DVKCNAVTLSAVLLAIAHLG-VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL 343
V N T+ +VL A A G L+LG + + L ++ + +IDMY KCG ++
Sbjct: 255 KVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEE 314
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
A F ++++KNV SW MI GY +EAL LF +M+++ + PN +TF+S+L AC++
Sbjct: 315 ASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACAN 374
Query: 404 AGLVQEGWHWLNTM--GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
G + G W++ + +++ V + ++D+ + G L A + + M K+
Sbjct: 375 LGALDLG-KWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKS-LAT 432
Query: 462 WGSLLGACRIHKNVD 476
W +++ +H + D
Sbjct: 433 WNAMISGFAMHGHTD 447
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/629 (39%), Positives = 378/629 (60%), Gaps = 35/629 (5%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D+ N W +++ A+ GD +A+ F M + + TFP + +CS++ G+
Sbjct: 226 DRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGE 285
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H GF +V+V SAL+DMY+KCG+L +A+ + + + ++VSW S++ G+V+
Sbjct: 286 QVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDD--DVVSWNSLMVGFVR 343
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+ EAL LFK + N+ +D SVL+ C ++N + HG
Sbjct: 344 HGLEEEALRLFKNM------------HGRNMKIDDYTFPSVLNCCVVGSIN--PKSVHGL 389
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+IK GF++ V N L+D YA+ G +D + VF+ M+EKD ++W S++ YAQN E+
Sbjct: 390 IIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEES 449
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L +F M + T V + ++++L A A L +L GK +H IK L S V S++
Sbjct: 450 LKIFCDM-RVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVA 508
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY KCG +D A F M+ K+V +WTA+I GY + + R +L + M+ +G RP++IT
Sbjct: 509 MYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFIT 568
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
F+ +L ACSHAGLV EG + M + I+PG EHY CM+DL GR+GKL EA L++ M
Sbjct: 569 FIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQM 628
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
VK D VW SLL ACR+H+N++L E AA LFELEP N +V+LSN+Y+ + +W DV
Sbjct: 629 DVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVA 688
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
+ R LMK++ + K PG S +E+ +V+ F+ D+ HP+ +IY ++E+ ++++E GYV
Sbjct: 689 KIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVP 748
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
DM+ +HD+D+E KE+ L HSEKLA NLRVCGDCH+ ++ IS
Sbjct: 749 DMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYIS 808
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+V R I++RDS FH+F++G CSCGDYW
Sbjct: 809 RVFTRHIILRDSNCFHHFREGECSCGDYW 837
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/493 (29%), Positives = 239/493 (48%), Gaps = 56/493 (11%)
Query: 2 KLSKSSSVSSV------VSNVDKHSTNTNLTTLFN--KYVDKNNVFSWNSV--------- 44
+LSKS V+ + D++S NT +++ N + V+ +F S
Sbjct: 74 QLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSI 133
Query: 45 IADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF 104
I+ + G VEA F SMR ++ T ++ CS+L + +G+ H GF
Sbjct: 134 ISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGF 193
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
+VFV + L+DMY+KC +S+A LF + +N V WT+M+TGY QN + +A+ F
Sbjct: 194 EGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFF 253
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
+ + EC + ++L+ACS V E HGF++K GF S V
Sbjct: 254 RYMHAQGVEC------------NQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVY 301
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
V + L+D YA+ G + ++ + + M + D V+WNS++ + ++GL EAL +F M
Sbjct: 302 VQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNM-HGR 360
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
++K + T +VL +G + K +H +IK E +V +++DMY K G +D A
Sbjct: 361 NMKIDDYTFPSVLNCCV-VGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCA 418
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-- 402
F +M EK+V SWT+++ GY + E+L +F M GV P+ S+LSAC+
Sbjct: 419 YTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAEL 478
Query: 403 ---------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
H ++ G W ++ Y +V + + G L +A + M
Sbjct: 479 TLLEFGKQVHLDFIKSGLRWSQSV------------YNSLVAMYAKCGCLDDADAIFVSM 526
Query: 454 KVKADFVVWGSLL 466
+VK D + W +++
Sbjct: 527 QVK-DVITWTAII 538
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 199/415 (47%), Gaps = 46/415 (11%)
Query: 77 PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
PC K + L +H+ A ++ ++ ++ L++ SK G+++DARKLFD++PQ
Sbjct: 44 PC--KFMAFLRSIHTTTAASYES--------IYQTNQLLNQLSKSGQVNDARKLFDKMPQ 93
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLF---------KEFLLEESECG-GASENSDNVF- 185
++ SW +M++ YV EA LF + C G + ++F
Sbjct: 94 --KDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFR 151
Query: 186 --------VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
+ SVL CS + + E HGFV+K GF+ V V L+D YA+
Sbjct: 152 SMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCK 211
Query: 238 HVDVSRKVFDGM--IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
V + +F G+ K+ V W +++ YAQNG +A++ F M + V+CN T
Sbjct: 212 CVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYM-HAQGVECNQYTFPT 270
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
+L A + + G+ +H ++K +V V ++++DMY KCG + A+ M++ +
Sbjct: 271 ILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDD 330
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
V SW +++ G+ H EAL LF M ++ + TF SVL+ C + + H L
Sbjct: 331 VVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGL- 389
Query: 416 TMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
I+ G E+Y +VD+ + G + AY + E M ++ D + W SL+
Sbjct: 390 ------IIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKM-LEKDVISWTSLV 437
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/650 (39%), Positives = 380/650 (58%), Gaps = 61/650 (9%)
Query: 39 FSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQ 98
+W +I A G +L +F+ +R ++P R FP +++ + + + H
Sbjct: 42 LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101
Query: 99 AFIFGFHRDVFVSSALIDMYSKCG----------------------ELSDARKLFDEIPQ 136
GFH D++ ++AL++MYSK ++ RKLFD +P
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMP- 160
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
+R++VSW +++ G QN EAL + KE +N+ DS ++S+L
Sbjct: 161 -VRDVVSWNTVIAGNAQNGMYEEALNMVKEM------------GKENLRPDSFTLSSILP 207
Query: 197 ACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
+ VT+G HG+ I+ GFD +V +G++LID YA+ V++S F + +DA
Sbjct: 208 IFTEHA--NVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDA 265
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
++WNSIIA QNG + L F +M+K VK V+ S+V+ A AHL L LGK +H
Sbjct: 266 ISWNSIIAGCVQNGRFDQGLGFFRRMLKE-KVKPMQVSFSSVIPACAHLTALNLGKQLHA 324
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN--QMKEKNVRSWTAMIAGYGMHCRA 372
+I++ +++ + +S++DMY KCG + +AR FN +M ++++ SWTA+I G MH A
Sbjct: 325 YIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHA 384
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC 432
+A+ LF +M+ GV+P Y+ F++VL+ACSHAGLV EGW + N+M +F + PG+EHY
Sbjct: 385 LDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAA 444
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNN 492
+ DLLGRAG+L+EAYD I M + VW +LL ACR HKN++L E K+ ++P N
Sbjct: 445 VADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGN 504
Query: 493 CGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQH 552
G HV++SNIY+ A RW D + R M+ L KTP S +E+ KVH FL GDK HP +
Sbjct: 505 MGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYY 564
Query: 553 EKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------- 599
+KI E L L ++++ GYV D V+HDVD+E K LR HSE+LA
Sbjct: 565 DKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTT 624
Query: 600 -----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
N+RVC DCHT I+ ++K+V REI+VRD+ RFH+FK+G CSCGDYW
Sbjct: 625 IRVIKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 181/351 (51%), Gaps = 23/351 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SWN+VIA A+ G EAL M K +L P T + + ++ GK+ H
Sbjct: 163 DVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIH 222
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A GF +DVF+ S+LIDMY+KC ++ + F + R+ +SW S++ G VQN
Sbjct: 223 GYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSN--RDAISWNSIIAGCVQNGR 280
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+ L F+ L E+ V V+ +SV+ AC+ +T + + H ++I+
Sbjct: 281 FDQGLGFFRRMLKEK------------VKPMQVSFSSVIPACAHLTALNLGKQLHAYIIR 328
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG--MIEKDAVTWNSIIAIYAQNGLAAEAL 274
GFD + ++L+D YA+ G++ ++R +F+ M ++D V+W +II A +G A +A+
Sbjct: 329 LGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAV 388
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIID 333
+F++M+ VK V AVL A +H G++ G K + + + ++ D
Sbjct: 389 SLFEEMLVD-GVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVAD 447
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMHCRAREALDLFYKMI 383
+ + G+++ A + M E+ S W+ ++A CRA + ++L K++
Sbjct: 448 LLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAA----CRAHKNIELAEKVV 494
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 18/246 (7%)
Query: 21 TNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAI 80
T L+ + + SWNS+IA + G + L F M K + P + +F I
Sbjct: 248 TQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVI 307
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
+C+ L L+ GKQ H GF + F++S+L+DMY+KCG + AR +F++I R+
Sbjct: 308 PACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRD 367
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
+VSWT+++ G + +A +A+ LF+E L+ D V VA +VL+ACS
Sbjct: 368 MVSWTAIIMGCAMHGHALDAVSLFEEMLV------------DGVKPCYVAFMAVLTACSH 415
Query: 201 VTVNGVTEGAHGF-VIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGMIEKD-AVT 256
+ V EG F ++R F G+ + + D R G ++ + M E+
Sbjct: 416 AGL--VDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSV 473
Query: 257 WNSIIA 262
W++++A
Sbjct: 474 WSTLLA 479
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 106/254 (41%), Gaps = 39/254 (15%)
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
++ W II YA +GL +L F+ +++S + + ++L A L + +H
Sbjct: 41 SLAWICIIKCYASHGLLRHSLASFN-LLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLH 99
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCG----------------------QVDLARKAFNQM 351
VI++ + ++++MY K ++D RK F++M
Sbjct: 100 AAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRM 159
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
++V SW +IAG + EAL++ +M K +RP+ T S+L + V +G
Sbjct: 160 PVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKG- 218
Query: 412 HWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKE---AYDLIEGMKVKADFVVWGS 464
H + I G + ++D+ + +++ A+ L+ D + W S
Sbjct: 219 ----KEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSN----RDAISWNS 270
Query: 465 LLGACRIHKNVDLG 478
++ C + D G
Sbjct: 271 IIAGCVQNGRFDQG 284
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/659 (38%), Positives = 390/659 (59%), Gaps = 34/659 (5%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
S + S +++V K + +++F++ + K ++ SWN++IA AL
Sbjct: 144 SDAFSANALVDMYAKVGILEDASSVFDE-IAKPDIVSWNAIIAGCVLHEYHHRALELLRE 202
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M K + P T A+K+C+ + G+Q H D F+ LIDMYSKC
Sbjct: 203 MNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNS 262
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ DAR +F +P+R ++++W ++++G+ QN+ EA LF +++
Sbjct: 263 MDDARLVFKLMPER--DMIAWNAVISGHSQNEEDEEAASLFPLM------------HTEG 308
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ + +++VL + + + N + H +K GF+ + V N+LID Y + GHV+ +
Sbjct: 309 IGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDAT 368
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+VF+ D V + S++ YAQ+G EAL ++ +M + +K ++ S++L A A L
Sbjct: 369 RVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEM-QDRGIKPDSFVCSSLLNACASL 427
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
GK +H ++K + G S+++MY KCG ++ A AF+++ + + SW+AMI
Sbjct: 428 SAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMI 487
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
G H +EAL LF +M+K GV PN+IT VSVL AC+HAGLV E H+ N+M F I
Sbjct: 488 GGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGI 547
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
EP EHY CM+DLLGRAGKL+ A +L+ M +A+ +VWG+LLGA RIHKN+DLGE AA+
Sbjct: 548 EPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAE 607
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
L LEP G HVLL+NIYA+ G W+ V R R LMK+ ++ K PG S +E++ KV+ F+
Sbjct: 608 MLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFI 667
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
VGD+ H + +IY L+EL+ L++ GYV + +HDV++ EKE L HSEKLA
Sbjct: 668 VGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFG 727
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCHTV++ ISK+V REI+VRD+ RFH+F++G CSCG+YW
Sbjct: 728 LIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 214/409 (52%), Gaps = 25/409 (6%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M L + FP +K+C+ DL GKQ H + GF D FV+++L+ +Y+KCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
DAR LFD IP R++VSW ++ + YV +D EA+ LF + +L
Sbjct: 61 FGDARSLFDAIPD--RSVVSWNALFSCYVHSDMHGEAVSLFHDMVLS------------G 106
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ + +++S+++ C+ + + HG++IK G+DS+ N L+D YA+ G ++ +
Sbjct: 107 IRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDAS 166
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VFD + + D V+WN+IIA + AL++ +M KS N TLS+ L A A +
Sbjct: 167 SVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCP-NMFTLSSALKACAGM 225
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
+ LG+ +H +IKMD+ +G +IDMY KC +D AR F M E+++ +W A+I
Sbjct: 226 ALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVI 285
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
+G+ + EA LF M G+ N T +VL S A L +++ H ++
Sbjct: 286 SGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLK--SIAALQA---NYMCRQIHALSL 340
Query: 424 EPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ G E ++D G+ G +++A + E + D V++ SL+ A
Sbjct: 341 KSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPI-VDLVLFTSLVTA 388
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 218/448 (48%), Gaps = 22/448 (4%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+LF+ D++ V SWN++ + EA+ F M + P + I C+ L
Sbjct: 66 SLFDAIPDRS-VVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D G++ H G+ D F ++AL+DMY+K G L DA +FDEI + +IVSW +
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAK--PDIVSWNA 182
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ G V ++ AL L +E N + + ++S L AC+ + + +
Sbjct: 183 IIAGCVLHEYHHRALELLREM------------NKSGMCPNMFTLSSALKACAGMALREL 230
Query: 207 TEGAHGFVIK--RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
H +IK G DS +GVG LID Y++ +D +R VF M E+D + WN++I+ +
Sbjct: 231 GRQLHSSLIKMDMGSDSFLGVG--LIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGH 288
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
+QN EA +F M + + N TLS VL +IA L + + IH +K E
Sbjct: 289 SQNEEDEEAASLFPLM-HTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFD 347
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V S+ID Y KCG V+ A + F + ++ +T+++ Y + EAL L+ +M
Sbjct: 348 NYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQD 407
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
G++P+ S+L+AC+ ++G ++ +F + +V++ + G ++
Sbjct: 408 RGIKPDSFVCSSLLNACASLSAYEQGKQ-VHVHILKFGFMSDIFAGNSLVNMYAKCGSIE 466
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIH 472
+A + V+ V W +++G H
Sbjct: 467 DASCAFSRIPVRG-IVSWSAMIGGLAQH 493
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 8/191 (4%)
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
+KCN +VL A L LGK +H V+ + V S++ +Y KCG AR
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65
Query: 346 KAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
F+ + +++V SW A+ + Y EA+ LF+ M+ +G+RPN + S+++ C+
Sbjct: 66 SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLE 125
Query: 406 LVQEGWH---WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW 462
+G +L +G++ + +VD+ + G L++A + + + K D V W
Sbjct: 126 DSVQGRKIHGYLIKLGYDSDAFSA----NALVDMYAKVGILEDASSVFDEI-AKPDIVSW 180
Query: 463 GSLLGACRIHK 473
+++ C +H+
Sbjct: 181 NAIIAGCVLHE 191
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/639 (40%), Positives = 384/639 (60%), Gaps = 38/639 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F K ++N V +W +I L + G + EA+ F M P R T I +C+ +
Sbjct: 227 VFEKMPERNAV-TWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANME 285
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC---GELSDARKLFDEIPQRIRNIVSW 144
L G+Q H QA G D V LI+MY+KC G + ARK+FD+I N+ SW
Sbjct: 286 LLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH--NVFSW 343
Query: 145 TSMLTGYVQNDNA-REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
T+M+TGYVQ EAL LF+ +L +V + +S L AC+ +
Sbjct: 344 TAMITGYVQKGGYDEEALDLFRGMIL------------THVIPNHFTFSSTLKACANLAA 391
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ E +K GF S V N+LI YAR G +D +RK FD + EK+ +++N++I
Sbjct: 392 LRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDA 451
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YA+N + EAL++F++ ++ + +A T +++L A +G + G+ IH +VIK L+
Sbjct: 452 YAKNLNSEEALELFNE-IEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKL 510
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ V ++I MY +CG ++ A + F M+++NV SWT++I G+ H A +AL+LF+KM+
Sbjct: 511 NQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKML 570
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ GVRPN +T+++VLSACSH GLV EGW +M E + P +EHY CMVD+LGR+G L
Sbjct: 571 EEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSL 630
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
EA I M KAD +VW + LGACR+H N++LG+ AAK + E EP++ ++LLSN+Y
Sbjct: 631 SEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLY 690
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A+ +W++V R MK + L K G S VE+ KVH F VGD HP+ +IY+ L+ L+
Sbjct: 691 ASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLS 750
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
VK++++GYV ++ V+HDV++E+KE L HSEK+A NLR+CG
Sbjct: 751 VKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICG 810
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH+ I+ IS REI+VRD+ RFH+ KDG CSC +YW
Sbjct: 811 DCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 198/393 (50%), Gaps = 32/393 (8%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P T+ +K C G H++ D ++LI +YSKCG+ A +
Sbjct: 64 PDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSI 123
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F ++ R+++SW++M++ + N+ ALL F + + + + +
Sbjct: 124 F-QLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMI------------ENGYYPNEYC 170
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGF-DSEVGVGNTLIDAYARG-GHVDVSRKVFDG 248
A+ ACS V + GFV+K G+ S+V VG LID + +G G + + KVF+
Sbjct: 171 FAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEK 230
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M E++AVTW +I Q G A EA+D+F +M+ S + + TLS V+ A A++ +L L
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILS-GYEPDRFTLSGVISACANMELLLL 289
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKC---GQVDLARKAFNQMKEKNVRSWTAMIAG 365
G+ +H Q I+ L VG +I+MY KC G + ARK F+Q+ + NV SWTAMI G
Sbjct: 290 GQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITG 349
Query: 366 YGMH-CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
Y EALDLF MI V PN+ TF S L AC++ ++ G ++
Sbjct: 350 YVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHA-----VK 404
Query: 425 PGVEHYGC----MVDLLGRAGKL---KEAYDLI 450
G C ++ + R+G++ ++A+D++
Sbjct: 405 LGFSSVNCVANSLISMYARSGRIDDARKAFDIL 437
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG +A+ + MV + T S L +G +H+++ + DL+ +
Sbjct: 44 NGRLHKAISTLEHMVHQGS-HPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSV 102
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQM-KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
S+I +Y KCGQ + A F M +++ SW+AM++ + + AL F MI+
Sbjct: 103 TLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN 162
Query: 386 GVRPNYITFVSVLSACSHAGLVQEG 410
G PN F + ACS A V G
Sbjct: 163 GYYPNEYCFAAATRACSTAEFVSVG 187
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/630 (41%), Positives = 365/630 (57%), Gaps = 33/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K ++ SWN+VIA + AL+ M + P+ T A+K+C+A+ + G
Sbjct: 249 IPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLG 308
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H D FV LIDMYSKCG L DAR +FD +P + +++ W S+++GY
Sbjct: 309 RQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXK--DVIVWNSIISGYS 366
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
EA+ LF E E + ++++L + + NG E H
Sbjct: 367 NCGYDIEAMSLFTNMYKEGLE------------FNQTTLSTILKSTAGSQANGFCEQVHT 414
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
IK G+ + V N+L+D+Y + ++ + KVF+ +D V + S+I Y+Q GL E
Sbjct: 415 ISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEE 474
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL ++ +M + D+K +A S++ A A+L GK IH V+K L V G S++
Sbjct: 475 ALKMYLRM-QDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLV 533
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+MY KCG +D A FN++ + + SW+AMI G H R+AL LFY+M+K G+ PN+I
Sbjct: 534 NMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHI 593
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
T VSVLSAC+HAGLV E + M F I P EHY CMVD+LGR G+L EA L++
Sbjct: 594 TLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKE 653
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M +A VWG+LLGA RIHKN++LG AA+ L LEP G H+LL+NIYA+ G W++V
Sbjct: 654 MPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNV 713
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+ R MKN + K PG S +EL+ KV+ F+VGD+ HP+ ++IY L++L +L GYV
Sbjct: 714 AKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYV 773
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
+ + +HDV+Q EKE L HSEKLA NLRVC DCHT + I
Sbjct: 774 PMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFI 833
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SKV REI+VRD RFH+F+DG CSCGDYW
Sbjct: 834 SKVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 202/410 (49%), Gaps = 50/410 (12%)
Query: 115 IDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE---- 170
+++YSKC ARKL I ++VSW+++++GYVQN EALL + E L
Sbjct: 89 VNLYSKCQCFRVARKLV--IDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKG 146
Query: 171 -----ESECGGASEN-------------------SDNVFVDSVAIASVLSACSRVTVNGV 206
S G S S + + ++++VL+AC+ +
Sbjct: 147 NEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENY 206
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA---I 263
HG++IK G+DS+ N L+D YA+ G + + VF + + D V+WN++IA +
Sbjct: 207 GMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVL 266
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
+ +N L AL + +M S V + TLS+ L A A +G+++LG+ +H ++KMD+E
Sbjct: 267 HEKNDL---ALKLLGKM-GSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEP 322
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
VG +IDMY KCG + AR F+ M K+V W ++I+GY EA+ LF M
Sbjct: 323 DSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMY 382
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG----CMVDLLGR 439
K G+ N T ++L S AG G+ H +I+ G ++ G ++D G+
Sbjct: 383 KEGLEFNQTTLSTILK--STAGSQANGF---CEQVHTISIKSGYQYDGYVANSLLDSYGK 437
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
L++A + E + D V + S++ A + LGE A K ++
Sbjct: 438 CCLLEDAAKVFEVCPAE-DLVAYTSMITA---YSQYGLGEEALKMYLRMQ 483
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 194/395 (49%), Gaps = 26/395 (6%)
Query: 25 LTTLFNKYV--DKNNVFSWNSVI--ADLARG---GDSVEALRAFSSMRKLSLTPTRSTFP 77
L T + Y+ K N F+++SV+ L R G + + + M ++P +
Sbjct: 133 LLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLS 192
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
+ +C+ L D + G + H G+ D F ++AL+DMY+K G A +F EIP+
Sbjct: 193 TVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPK- 251
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+IVSW +++ G V ++ AL L + G+ + ++F ++S L A
Sbjct: 252 -PDIVSWNAVIAGCVLHEKNDLALKLLGKM--------GSYRVAPSMFT----LSSALKA 298
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C+ + + + H ++K + + VG LID Y++ G + +R VFD M KD + W
Sbjct: 299 CAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVW 358
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC--IHDQ 315
NSII+ Y+ G EA+ +F M K ++ N TLS +L + A G G C +H
Sbjct: 359 NSIISGYSNCGYDIEAMSLFTNMYKE-GLEFNQTTLSTILKSTA--GSQANGFCEQVHTI 415
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
IK + V S++D Y KC ++ A K F +++ ++T+MI Y + EA
Sbjct: 416 SIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEA 475
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
L ++ +M ++P+ F S+ +AC++ ++G
Sbjct: 476 LKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQG 510
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 66/317 (20%)
Query: 230 IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM--------- 280
++ Y++ V+RK+ E D V+W+++I+ Y QNG EAL + +M
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 281 ------------------------------VKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+ ST + N +LS VL A A L G
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
+H +IK+ + +++DMY K G + A F ++ + ++ SW A+IAG +H
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
+ AL L KM V P+ T S L AC+ GLV+ G L++ + ++EP
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLG-RQLHSALMKMDMEPDSFVG 327
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
++D+ + G L++A + + M K D +VW S++
Sbjct: 328 VGLIDMYSKCGLLQDARMVFDLMPXK-DVIVWNSIISGY--------------------- 365
Query: 491 NNCGYHV----LLSNIY 503
+NCGY + L +N+Y
Sbjct: 366 SNCGYDIEAMSLFTNMY 382
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/660 (40%), Positives = 383/660 (58%), Gaps = 68/660 (10%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + + N SWN++I A D + AL + M L L+P TFP KSC+
Sbjct: 36 KSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQ 95
Query: 91 SGKQAHQQAFIFGF-------------------------------HRDVFVSSALIDMYS 119
GKQ H Q +G HRDV +A+I Y+
Sbjct: 96 EGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYA 155
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
G + A+K+FDEIP I+++VSW +M++GY + +EAL LF E +
Sbjct: 156 SRGNMDKAQKMFDEIP--IKDVVSWNAMISGYAEIGRYKEALELFNEMM----------- 202
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
+V D +A+VLS C+ + H ++ GF S + + N LID Y++ G +
Sbjct: 203 -KMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEM 261
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+ + +F+G+ KD ++WN++I YA EAL VF +M+K + N VT+ ++L A
Sbjct: 262 ERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETP-NDVTMLSILPA 320
Query: 300 IAHLGVLRLGKCIH---DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
AHLG + +G+ IH D+ +K + + + TS+IDMY KCG ++ A + F+ + K++
Sbjct: 321 CAHLGAIDIGRWIHVYIDKKLKGIITNTSL-QTSLIDMYAKCGNIEAANQVFDTILNKSL 379
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
S AMI G+ MH RA A DL +M K G+ P+ ITFV +LSACSHAGL G +
Sbjct: 380 SSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKS 439
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M ++ IEP +EHYGCM+DLLGR+G KEA +LI M ++ D V+WGSLL AC+IHKN++
Sbjct: 440 MTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLE 499
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
LGE+ A+KL ++EP N G +VLLSNIYA + RW+DV R R+L+ ++ L K PG S +E+
Sbjct: 500 LGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEID 559
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
VH FL+GDK HPQ+++IY+ LEE++ L E G+V+D + V+ ++++E KE L HSE
Sbjct: 560 SMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSE 619
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLRVC +CH +LISK+ REI+ RD RFH+FKDG+C
Sbjct: 620 KLAIAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
A F ++E N SW MI G+ + AL+L+ MI G+ PN TF + +C+
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWG 463
+ QEG ++ ++ + + + ++ + + G +++A+ + + + D V +
Sbjct: 91 SKAAQEGKQ-IHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHR-DVVSYT 148
Query: 464 SLLGACRIHKNVDLGEIAAKKLFELEP--NNCGYHVLLSNIYANAGRW-EDVERTRSLMK 520
+++ N+D A+K+F+ P + ++ ++S YA GR+ E +E +MK
Sbjct: 149 AMITGYASRGNMD----KAQKMFDEIPIKDVVSWNAMISG-YAEIGRYKEALELFNEMMK 203
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 270/697 (38%), Positives = 397/697 (56%), Gaps = 83/697 (11%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
TL V + NVFS++++I ++ AL FS M L P P A+K+C+
Sbjct: 67 ATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAG 126
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L L +Q H A + GF D FV S+L+ MY KC ++ DA ++FD + + ++VSW+
Sbjct: 127 LSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEP--DVVSWS 184
Query: 146 SMLTGYVQNDNAREALLLFKEF--------------LLEESECGGASENSDNVFVD---- 187
+++ Y + EA LF E ++ G + +F+D
Sbjct: 185 ALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLR 244
Query: 188 -----SVAIASVLSACSRVT--VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY------- 233
I+SVL A + V G+ HG+VIK+G S+ V + LID Y
Sbjct: 245 GFEPDGTTISSVLPAVGDLEDLVMGIL--IHGYVIKQGLVSDKCVSSALIDMYGKCSCTS 302
Query: 234 ------------------------ARGGHVDVSRKVF----DGMIEKDAVTWNSIIAIYA 265
+R G V+ S ++F D +E + V+W S+IA +
Sbjct: 303 EMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCS 362
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QNG EAL++F +M + VK N+VT+ +L A ++ L GK H ++ + V
Sbjct: 363 QNGRDIEALELFREM-QIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDV 421
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VG+++IDMY KCG++ +R F+ + KN+ W A+IAGY MH +A+EA+++F M ++
Sbjct: 422 YVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRS 481
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G +P+ I+F VLSACS +GL +EG ++ N+M ++ IE VEHY CMV LL RAGKL++
Sbjct: 482 GQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQ 541
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
AY +I M V D VWG+LL +CR+H NV LGE+AA+KLFELEP+N G ++LLSNIYA+
Sbjct: 542 AYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYAS 601
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
G W +V R R +MKN+ L K PG S +E++ KVH L GDK HPQ +I E L++L+++
Sbjct: 602 KGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSME 661
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++++GY ++ V+ DV++++KE L HSEKLA NLR+CGDC
Sbjct: 662 MKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDC 721
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H VI+ IS REI VRD+ RFH+FK+G CSCGDYW
Sbjct: 722 HVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 200/462 (43%), Gaps = 93/462 (20%)
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
S L +QAH G D +++ L+ Y+ +DA + D +P+ N+ S
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEP--NVFS 81
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
+++++ + + AL F + L + + D+ + S + AC+ ++
Sbjct: 82 FSTLIYAFSKFHQFHHALSTFSQML------------TRGLMPDNRVLPSAVKACAGLSA 129
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
HG GFDS+ V ++L+ Y + + + +VFD M E D V+W++++A
Sbjct: 130 LKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAA 189
Query: 264 YAQNGLAAEALDVFDQM----VKSTDVKCNAV---------------------------- 291
YA+ G EA +F +M V+ + N +
Sbjct: 190 YARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPD 249
Query: 292 --TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC----------- 338
T+S+VL A+ L L +G IH VIK L V +++IDMY KC
Sbjct: 250 GTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFD 309
Query: 339 --------------------GQVDLARKAFNQMKEK----NVRSWTAMIAGYGMHCRARE 374
GQV+ + + F Q+K++ NV SWT+MIA + R E
Sbjct: 310 QMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIE 369
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE---HYG 431
AL+LF +M AGV+PN +T +L AC + + G H F++ G+ + G
Sbjct: 370 ALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHG-----KAAHCFSLRRGISTDVYVG 424
Query: 432 -CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++D+ + G+++ + +G+ K + V W +++ +H
Sbjct: 425 SALIDMYAKCGRIQASRICFDGIPTK-NLVCWNAVIAGYAMH 465
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/639 (39%), Positives = 394/639 (61%), Gaps = 38/639 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++N V +W +I A+ G + +A+ F M P R T+ + +C+ L
Sbjct: 187 VFDKMPERNLV-TWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 245
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC---GELSDARKLFDEIPQRIRNIVSW 144
L GKQ H + G DV V +L+DMY+KC G + D+RK+F+++P+ N++SW
Sbjct: 246 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH--NVMSW 303
Query: 145 TSMLTGYVQNDNA-REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
T+++T YVQ+ +EA+ LF + + S ++ + + +SVL AC ++
Sbjct: 304 TAIITAYVQSGECDKEAIELFCKMI------------SGHIRPNHFSFSSVLKACGNLSD 351
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
E + + +K G S VGN+LI YAR G ++ +RK FD + EK+ V++N+I+
Sbjct: 352 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 411
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YA+N + EA +F++ + T + +A T +++L A +G + G+ IH +++K +
Sbjct: 412 YAKNLKSEEAFLLFNE-IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKS 470
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ + ++I MY +CG ++ A + FN+M+++NV SWT+MI G+ H A AL++F+KM+
Sbjct: 471 NQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML 530
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ G +PN IT+V+VLSACSH G++ EG N+M E I P +EHY CMVDLLGR+G L
Sbjct: 531 ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLL 590
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
EA + I M + AD +VW +LLGACR+H N +LG AA+ + E EP++ ++LLSN++
Sbjct: 591 VEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLH 650
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A+AG+W+DV + R MK R L K G S +E+ +VH F VG+ HPQ +IY+ L++L
Sbjct: 651 ASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLA 710
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
K++E+GY+ D V+HD+++E+KE L HSEK+A NLRVCG
Sbjct: 711 SKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCG 770
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCHT I+ IS REIVVRDS RFH+ K+G+CSC DYW
Sbjct: 771 DCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 217/400 (54%), Gaps = 32/400 (8%)
Query: 60 AFSS---MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
AFS+ M + + P +T+ +KSC + GK H++ G D V + LI
Sbjct: 10 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
+YSKCG+ AR +F+ + + R++VSW++M++ + N +A+ F + L E G
Sbjct: 70 LYSKCGDTETARLIFEGMGNK-RDLVSWSAMVSCFANNSMEWQAIWTFLDML----ELG- 123
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF-DSEVGVGNTLIDAYAR 235
+ + A+V+ ACS V E +GFV+K G+ +++V VG LID + +
Sbjct: 124 -------FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK 176
Query: 236 G-GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
G G + + KVFD M E++ VTW +I +AQ G A +A+D+F M S V + T S
Sbjct: 177 GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYS 235
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC---GQVDLARKAFNQM 351
+VL A LG+L LGK +H +VI++ L V VG S++DMY KC G VD +RK F QM
Sbjct: 236 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 295
Query: 352 KEKNVRSWTAMIAGYGMHCRA-REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
E NV SWTA+I Y +EA++LF KMI +RPN+ +F SVL AC + G
Sbjct: 296 PEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTG 355
Query: 411 WHWLNTMGHEFNIEPGVEHYGC----MVDLLGRAGKLKEA 446
+ + ++ G+ C ++ + R+G++++A
Sbjct: 356 -----EQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 390
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/639 (39%), Positives = 394/639 (61%), Gaps = 38/639 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++N V +W +I A+ G + +A+ F M P R T+ + +C+ L
Sbjct: 205 VFDKMPERNLV-TWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 263
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC---GELSDARKLFDEIPQRIRNIVSW 144
L GKQ H + G DV V +L+DMY+KC G + D+RK+F+++P+ N++SW
Sbjct: 264 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH--NVMSW 321
Query: 145 TSMLTGYVQNDNA-REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
T+++T YVQ+ +EA+ LF + + S ++ + + +SVL AC ++
Sbjct: 322 TAIITAYVQSGECDKEAIELFCKMI------------SGHIRPNHFSFSSVLKACGNLSD 369
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
E + + +K G S VGN+LI YAR G ++ +RK FD + EK+ V++N+I+
Sbjct: 370 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 429
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YA+N + EA +F++ + T + +A T +++L A +G + G+ IH +++K +
Sbjct: 430 YAKNLKSEEAFLLFNE-IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKS 488
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ + ++I MY +CG ++ A + FN+M+++NV SWT+MI G+ H A AL++F+KM+
Sbjct: 489 NQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML 548
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ G +PN IT+V+VLSACSH G++ EG N+M E I P +EHY CMVDLLGR+G L
Sbjct: 549 ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLL 608
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
EA + I M + AD +VW +LLGACR+H N +LG AA+ + E EP++ ++LLSN++
Sbjct: 609 VEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLH 668
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A+AG+W+DV + R MK R L K G S +E+ +VH F VG+ HPQ +IY+ L++L
Sbjct: 669 ASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLA 728
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
K++E+GY+ D V+HD+++E+KE L HSEK+A NLRVCG
Sbjct: 729 SKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCG 788
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCHT I+ IS REIVVRDS RFH+ K+G+CSC DYW
Sbjct: 789 DCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 217/400 (54%), Gaps = 32/400 (8%)
Query: 60 AFSS---MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
AFS+ M + + P +T+ +KSC + GK H++ G D V + LI
Sbjct: 28 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
+YSKCG+ AR +F+ + + R++VSW++M++ + N +A+ F + L E G
Sbjct: 88 LYSKCGDTETARLIFEGMGNK-RDLVSWSAMVSCFANNSMEWQAIWTFLDML----ELG- 141
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF-DSEVGVGNTLIDAYAR 235
+ + A+V+ ACS V E +GFV+K G+ +++V VG LID + +
Sbjct: 142 -------FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK 194
Query: 236 G-GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
G G + + KVFD M E++ VTW +I +AQ G A +A+D+F M S V + T S
Sbjct: 195 GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYS 253
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC---GQVDLARKAFNQM 351
+VL A LG+L LGK +H +VI++ L V VG S++DMY KC G VD +RK F QM
Sbjct: 254 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 313
Query: 352 KEKNVRSWTAMIAGYGMHCRA-REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
E NV SWTA+I Y +EA++LF KMI +RPN+ +F SVL AC + G
Sbjct: 314 PEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTG 373
Query: 411 WHWLNTMGHEFNIEPGVEHYGC----MVDLLGRAGKLKEA 446
+ + ++ G+ C ++ + R+G++++A
Sbjct: 374 -----EQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 408
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/639 (38%), Positives = 376/639 (58%), Gaps = 40/639 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++++ V SW+++I L+R + AL M + + P+ + +
Sbjct: 151 VFDKMMERD-VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTA 209
Query: 88 DLHSGKQAHQQAFIF----GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
++ GK H A++ H V ++AL+DMY+KCG L AR+LF+ + Q+ +VS
Sbjct: 210 NMRMGKAMH--AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQK--TVVS 265
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
WT+M+ G ++++ E LF +N+F + + + S++ C
Sbjct: 266 WTAMIAGCIRSNRLEEGTKLFIRM------------QEENIFPNEITMLSLIVECGFTGA 313
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ + H ++++ GF + + L+D Y + + +R +FD +D + W ++++
Sbjct: 314 LQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSA 373
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YAQ +A ++FDQM +++ V+ VT+ ++L A G L LGK +H + K +E
Sbjct: 374 YAQANCIDQAFNLFDQM-RTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEV 432
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
I+ T+++DMY KCG ++ A + F + +++ W A+I G+ MH EALD+F +M
Sbjct: 433 DCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEME 492
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ GV+PN ITF+ +L ACSHAGLV EG M H F + P +EHYGCMVDLLGRAG L
Sbjct: 493 RQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLL 552
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
EA+++I+ M +K + +VWG+L+ ACR+HKN LGE+AA +L E+EP NCGY+VL+SNIY
Sbjct: 553 DEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIY 612
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A A RW D R MK + K PG S++E+ G VH FL+GD+ HPQ +I E L E+
Sbjct: 613 AAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMR 672
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
KL E GYV D ++V+ ++D+EEKE L HSEKLA NLRVC
Sbjct: 673 RKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCN 732
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH +L+SK+ R I+VRD RFH+F++G CSCGDYW
Sbjct: 733 DCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 220/431 (51%), Gaps = 29/431 (6%)
Query: 77 PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
P +K+C + GK+ H G RDVFV +AL+ MY +C + AR +FD++ +
Sbjct: 98 PSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMME 157
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
R++VSW++M+ +N AL L +E N V VA+ S+++
Sbjct: 158 --RDVVSWSTMIRSLSRNKEFDMALELIREM------------NFMQVRPSEVAMVSMVN 203
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT--LIDAYARGGHVDVSRKVFDGMIEKDA 254
+ + + H +VI+ + +GV T L+D YA+ GH+ ++R++F+G+ +K
Sbjct: 204 LFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTV 263
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
V+W ++IA ++ E +F +M + ++ N +T+ ++++ G L+LGK +H
Sbjct: 264 VSWTAMIAGCIRSNRLEEGTKLFIRM-QEENIFPNEITMLSLIVECGFTGALQLGKQLHA 322
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
+++ S+ + T+++DMY KC + AR F+ + ++V WTAM++ Y +
Sbjct: 323 YILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQ 382
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
A +LF +M +GVRP +T VS+LS C+ AG + G W+++ + +E +V
Sbjct: 383 AFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG-KWVHSYIDKERVEVDCILNTALV 441
Query: 435 DLLGRAGKLKEAYDL-IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE---- 489
D+ + G + A L IE + D +W +++ +H GE A E+E
Sbjct: 442 DMYAKCGDINAAGRLFIEA--ISRDICMWNAIITGFAMH---GYGEEALDIFAEMERQGV 496
Query: 490 -PNNCGYHVLL 499
PN+ + LL
Sbjct: 497 KPNDITFIGLL 507
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/656 (38%), Positives = 397/656 (60%), Gaps = 42/656 (6%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S++ ++ N LF++ + ++ SWN++I+ + G++ EAL + +R +
Sbjct: 189 ASLIHLYSRYKAVGNARILFDE-MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDS 247
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
S + +C+ D + G H + G ++FVS+ LID+Y++ G L D +K
Sbjct: 248 VTVVSL----LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE--ESECGGASENSDNVFVD 187
+FD + +R+++SW S++ Y N+ A+ LF+E L + +C +
Sbjct: 304 VFDRM--YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC-----------LT 350
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVF 246
+++AS+LS + GF +++G F ++ +GN ++ YA+ G VD +R VF
Sbjct: 351 LISLASILSQLGDIRA---CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ + D ++WN+II+ YAQNG A+EA+++++ M + ++ N T +VL A + G L
Sbjct: 408 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
R G +H +++K L V V TS+ DMY KCG+++ A F Q+ N W +IA +
Sbjct: 468 RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACH 527
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
G H +A+ LF +M+ GV+P++ITFV++LSACSH+GLV EG M ++ I P
Sbjct: 528 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPS 587
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
++HYGCMVD+ GRAG+L+ A I+ M ++ D +WG+LL ACR+H NVDLG+IA++ LF
Sbjct: 588 LKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLF 647
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
E+EP + GYHVLLSN+YA+AG+WE V+ RS+ + L KTPG+S +E+ KV F G+
Sbjct: 648 EVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGN 707
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
+ HP +E++Y L L KL+ +GYV D V+ DV+ +EKE L HSE+LA
Sbjct: 708 QTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIA 767
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH+V + ISK+ +REI+VRDS RFH+FK+G+CSCGDYW
Sbjct: 768 TPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 156/499 (31%), Positives = 266/499 (53%), Gaps = 33/499 (6%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS-SMRKL 67
+S+ + N+ + N L ++ +V++WN +I+ R G+S E +R FS M
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
LTP TFP +K+C + D G + H A FGF DV+V+++LI +YS+ + +A
Sbjct: 148 GLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R LFDE+P +R++ SW +M++GY Q+ NA+EAL L +D
Sbjct: 205 RILFDEMP--VRDMGSWNAMISGYCQSGNAKEALTLSNGLRA----------------MD 246
Query: 188 SVAIASVLSACSRVT--VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
SV + S+LSAC+ GVT H + IK G +SE+ V N LID YA G + +KV
Sbjct: 247 SVTVVSLLSACTEAGDFNRGVT--IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV 304
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD M +D ++WNSII Y N A+ +F +M + + ++ + +TL ++ ++ LG
Sbjct: 305 FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGD 363
Query: 306 LRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
+R + + ++ E + +G +++ MY K G VD AR FN + +V SW +I+
Sbjct: 364 IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIIS 423
Query: 365 GYGMHCRAREALDLFYKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
GY + A EA++++ M + G + N T+VSVL ACS AG +++G L+ + +
Sbjct: 424 GYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK-LHGRLLKNGL 482
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
V + D+ G+ G+L++A L + + + V W +L+ H + + + K
Sbjct: 483 YLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 484 KLFE--LEPNNCGYHVLLS 500
++ + ++P++ + LLS
Sbjct: 542 EMLDEGVKPDHITFVTLLS 560
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 165/318 (51%), Gaps = 21/318 (6%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L S K H + + ++V +S+ L+++Y G ++ AR FD I R ++ +W M
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR--DVYAWNLM 123
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY + N+ E + F F+L S + D SVL AC R ++G
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFML-----------SSGLTPDYRTFPSVLKAC-RTVIDG-- 169
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H +K GF +V V +LI Y+R V +R +FD M +D +WN++I+ Y Q+
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS 229
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A EAL + + + ++ D +VT+ ++L A G G IH IK LE + V
Sbjct: 230 GNAKEALTLSNGL-RAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+ID+Y + G++ +K F++M +++ SW ++I Y ++ + A+ LF +M + +
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 388 RPNYITFVSVLSACSHAG 405
+P+ +T +S+ S S G
Sbjct: 345 QPDCLTLISLASILSQLG 362
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 147/303 (48%), Gaps = 25/303 (8%)
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
V + L++ Y G+V ++R FD + +D WN +I+ Y + G ++E + F +
Sbjct: 86 VCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFML 145
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
S+ + + T +VL A + G IH +K V V S+I +Y + V
Sbjct: 146 SSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG 202
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP-NYITFVSVLSAC 401
AR F++M +++ SW AMI+GY A+EAL L G+R + +T VS+LSAC
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSAC 257
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
+ AG G H ++I+ G+E ++DL G+L++ + + M V+
Sbjct: 258 TEAGDFNRG-----VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR- 311
Query: 458 DFVVWGSLLGACRIHKNV--DLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
D + W S++ A +++ + +L ++P +C + L++I + G D+
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP-DCLTLISLASILSQLG---DIRAC 367
Query: 516 RSL 518
RS+
Sbjct: 368 RSV 370
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 44/255 (17%)
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L+ KC+H +++ ++V + ++++YC G V LAR F+ ++ ++V +W MI+G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 366 YGMHCRAREALDLF-YKMIKAGVRPNYITFVSVLSACS--------HAGLVQEGWHW--- 413
YG + E + F M+ +G+ P+Y TF SVL AC H ++ G+ W
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVY 186
Query: 414 -LNTMGHEFNIEPGVEH---------------YGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
++ H ++ V + + M+ ++G KEA L G++
Sbjct: 187 VAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA-M 245
Query: 458 DFVVWGSLLGACR----IHKNVDLGEIAAKKLFELEPNNCGYHVLLSN----IYANAGRW 509
D V SLL AC ++ V + + K E E + +SN +YA GR
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE-------LFVSNKLIDLYAEFGRL 298
Query: 510 EDVERTRSLMKNRRL 524
D ++ M R L
Sbjct: 299 RDCQKVFDRMYVRDL 313
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/639 (39%), Positives = 393/639 (61%), Gaps = 38/639 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++N V +W +I A+ G + +A+ F M P R T+ + +C+ L
Sbjct: 7 VFDKMPERNLV-TWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 65
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC---GELSDARKLFDEIPQRIRNIVSW 144
L GKQ H + G DV V +L+DMY+KC G + D+RK+F+++P+ N++SW
Sbjct: 66 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH--NVMSW 123
Query: 145 TSMLTGYVQNDNA-REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
T+++T Y Q+ +EA+ LF + + S ++ + + +SVL AC ++
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMI------------SGHIRPNHFSFSSVLKACGNLSD 171
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
E + + +K G S VGN+LI YAR G ++ +RK FD + EK+ V++N+I+
Sbjct: 172 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 231
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YA+N + EA +F++ + T + +A T +++L A +G + G+ IH +++K +
Sbjct: 232 YAKNLKSEEAFLLFNE-IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKS 290
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ + ++I MY +CG ++ A + FN+M+++NV SWT+MI G+ H A AL++F+KM+
Sbjct: 291 NQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML 350
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ G +PN IT+V+VLSACSH G++ EG N+M E I P +EHY CMVDLLGR+G L
Sbjct: 351 ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLL 410
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
EA + I M + AD +VW +LLGACR+H N +LG AA+ + E EP++ ++LLSN++
Sbjct: 411 VEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLH 470
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A+AG+W+DV + R MK R L K G S +E+ +VH F VG+ HPQ +IY+ L++L
Sbjct: 471 ASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLA 530
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
K++E+GY+ D V+HD+++E+KE L HSEK+A NLRVCG
Sbjct: 531 SKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCG 590
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCHT I+ IS REIVVRDS RFH+ K+G+CSC DYW
Sbjct: 591 DCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 121/211 (57%), Gaps = 14/211 (6%)
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
KVFD M E++ VTW +I +AQ G A +A+D+F M S V + T S+VL A L
Sbjct: 6 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYSSVLSACTEL 64
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC---GQVDLARKAFNQMKEKNVRSWT 360
G+L LGK +H +VI++ L V VG S++DMY KC G VD +RK F QM E NV SWT
Sbjct: 65 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 124
Query: 361 AMIAGYGMHCRA-REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
A+I Y +EA++LF KMI +RPN+ +F SVL AC + G +
Sbjct: 125 AIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTG-----EQVY 179
Query: 420 EFNIEPGVEHYGC----MVDLLGRAGKLKEA 446
+ ++ G+ C ++ + R+G++++A
Sbjct: 180 SYAVKLGIASVNCVGNSLISMYARSGRMEDA 210
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%)
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
A K F++M E+N+ +WT MI + AR+A+DLF M +G P+ T+ SVLSAC+
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 404 AGLVQEG 410
GL+ G
Sbjct: 64 LGLLALG 70
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/629 (41%), Positives = 371/629 (58%), Gaps = 38/629 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ +W+++IA L + G EAL F M+ + P R T + +C+ L L GK H
Sbjct: 394 DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIH 453
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
D+ +AL+ MY+KCG + A F+ + R +IV+W S++ GY Q +
Sbjct: 454 CFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR--DIVTWNSLINGYAQIGD 511
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFV 214
A+ +F + L + D+ + V+ AC+ +N + +G HG +
Sbjct: 512 PYNAIDMFYKLRLSA------------INPDAGTMVGVVPACA--LLNDLDQGTCIHGLI 557
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAEA 273
+K GF+S+ V N LID YA+ G + + +F+ KD VTWN IIA Y QNG A EA
Sbjct: 558 VKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEA 617
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+ F QM + + N+VT +VL A A+L R G H +I+M + +VG S+ID
Sbjct: 618 ISSFHQM-RLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLID 676
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY KCGQ+D + K FN+M K+ SW AM++GY +H A+ LF M ++ V+ + ++
Sbjct: 677 MYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVS 736
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
FVSVLSAC HAGLV+EG ++M +++I+P +EHY CMVDLLGRAG E I+ M
Sbjct: 737 FVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVM 796
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
V+ D VWG+LLG+CR+H NV LGE+A L +LEP N + V+LS+IYA +GRW D
Sbjct: 797 PVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAG 856
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
+ RS M + L KTPG S VEL+ KVHAF VGDK HPQ E ++ L K++++GYV
Sbjct: 857 KARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVP 916
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
D + V+ +V++E+KEM L HSE+LA NLRVC DCHT + IS
Sbjct: 917 DRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFIS 976
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
K+ R I+VRD+ RFH+F+DG+CSC DYW
Sbjct: 977 KITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 143/467 (30%), Positives = 245/467 (52%), Gaps = 31/467 (6%)
Query: 12 VVSNVDKHSTNT---NLTTLFNKYVDKNNVFS---------WNSVIADLARGGDSVEALR 59
+VS H + T NL +LF+K +VF WNS+I R EAL
Sbjct: 56 IVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALE 115
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
+ M + L P + TF +K+C+ +L G H + G RDVF+ + L+DMYS
Sbjct: 116 MYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYS 175
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
K G+L AR++FD++P+R ++V+W +M+ G Q+++ EA+ F+ L E
Sbjct: 176 KMGDLKRAREVFDKMPKR--DVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVE------ 227
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
SV++ ++ +++ + HG+V +R F S V N LID Y++ G V
Sbjct: 228 ------PSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDV 279
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
DV+R+VFD M+++D V+W +++A YA NG E L++FD+M K +V+ N V+ + LA
Sbjct: 280 DVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM-KLGNVRINKVSAVSAFLA 338
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A L GK IH ++ ++ ++V T ++ MY KCG+ + A++ F ++ +++ +W
Sbjct: 339 AAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAW 398
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
+A+IA EAL LF +M ++PN +T +S+L AC+ L++ G ++
Sbjct: 399 SAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG-KSIHCFTV 457
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ +++ + +V + + G A M + D V W SL+
Sbjct: 458 KADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLI 503
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 28/388 (7%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
S S+ +++VS K T T FN+ + ++ +WNS+I A+ GD A+ F
Sbjct: 463 SDLSTGTALVSMYAKCGFFTAALTTFNR-MSSRDIVTWNSLINGYAQIGDPYNAIDMFYK 521
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
+R ++ P T + +C+ L+DL G H GF D V +ALIDMY+KCG
Sbjct: 522 LRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGS 581
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L A LF++ ++ V+W ++ Y+QN +A+EA+ F + LE N
Sbjct: 582 LPSAEFLFNKT-DFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLE------------N 628
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+SV SVL A + + H +I+ GF S VGN+LID YA+ G +D S
Sbjct: 629 FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSE 688
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
K+F+ M KD V+WN++++ YA +G A+ +F M + + V+ ++V+ +VL A H
Sbjct: 689 KLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLM-QESQVQIDSVSFVSVLSACRHA 747
Query: 304 GVLRLGKCIHDQV-----IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVR 357
G++ G+ I + IK DLE ++D+ + G D M E +
Sbjct: 748 GLVEEGRKIFHSMSDKYHIKPDLEHY----ACMVDLLGRAGLFDETLGFIKVMPVEPDAG 803
Query: 358 SWTAMIAGYGMHCRAR---EALDLFYKM 382
W A++ MH + ALD K+
Sbjct: 804 VWGALLGSCRMHSNVKLGEVALDHLVKL 831
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/652 (39%), Positives = 379/652 (58%), Gaps = 61/652 (9%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SW + R D EA+ + M P FP +K+ S L DL +G+Q H A
Sbjct: 59 SWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAA 118
Query: 100 FIFGFHRD---------------------VFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
FG+ F ++AL+ MY+K G + D++ LF+ R
Sbjct: 119 VKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDR- 177
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
++VSW +M++ + Q+D EAL F+ +LE E +D V IASVL AC
Sbjct: 178 -DMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVE------------LDGVTIASVLPAC 224
Query: 199 SRVTVNGVTEGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
S + V + H +V++ VG+ L+D Y V+ R+VFD ++ + W
Sbjct: 225 SHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELW 284
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH-LGVLRLGKCIHDQV 316
N++I+ YA+NGL +AL +F +M+K + N T+++V+ A H L + GK IH
Sbjct: 285 NAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYA 344
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
I+ L + VG++++DMY KCG ++L+R+ FN+M KNV +W +I GMH + EAL
Sbjct: 345 IRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEAL 404
Query: 377 DLFYKMI-KAG----VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
+LF M+ +AG +PN +TF++V +ACSH+GL+ EG + M H+ +EP +HY
Sbjct: 405 ELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYA 464
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFV-VWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
C+VDLLGRAG+L+EAY+L+ M + D V W SLLGACRIH+NV+LGE+AAK L LEP
Sbjct: 465 CVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEP 524
Query: 491 NNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHP 550
N ++VLLSNIY++AG W R M+ + K PG S +E R +VH F+ GD HP
Sbjct: 525 NVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHP 584
Query: 551 QHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------- 599
Q E+++ +LE L+ K+++ GYV D + V+H+VD++EKE L HSEKLA
Sbjct: 585 QSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPG 644
Query: 600 -------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + ISK+++REI+VRD +RFH+FK+G CSCGDYW
Sbjct: 645 TTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 182/367 (49%), Gaps = 41/367 (11%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF +VD++ V SWN++I+ ++ EAL F M + T + +CS L
Sbjct: 170 LFESFVDRDMV-SWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLE 228
Query: 88 DLHSGKQAHQQAFIF---GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
L GK+ H A++ + FV SAL+DMY C ++ R++FD I R I W
Sbjct: 229 RLDVGKEIH--AYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILG--RRIELW 284
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
+M++GY +N +AL+LF E + + ++ +ASV+ AC ++
Sbjct: 285 NAMISGYARNGLDEKALILFIEMI-----------KVAGLLPNTTTMASVMPACVH-SLA 332
Query: 205 GVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ +G H + I+ S++ VG+ L+D YA+ G +++SR+VF+ M K+ +TWN +I
Sbjct: 333 AIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIM 392
Query: 263 IYAQNGLAAEALDVFDQMV----KSTDVKCNAVTLSAVLLAIAHLGVLRLG-----KCIH 313
+G EAL++F MV + + K N VT V A +H G++ G + H
Sbjct: 393 ACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKH 452
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK--NVRSWTAMIAGYGMHCR 371
D ++ + V +D+ + GQ++ A + N M + V +W++++ CR
Sbjct: 453 DHGVEPTSDHYACV----VDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGA----CR 504
Query: 372 AREALDL 378
+ ++L
Sbjct: 505 IHQNVEL 511
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/639 (39%), Positives = 393/639 (61%), Gaps = 38/639 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++N V +W +I A+ G + +A+ F M P R T+ + +C+ L
Sbjct: 12 VFDKMPERNLV-TWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 70
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC---GELSDARKLFDEIPQRIRNIVSW 144
L GKQ H + G DV V +L+DMY+KC G + D+RK+F+++P+ N++SW
Sbjct: 71 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH--NVMSW 128
Query: 145 TSMLTGYVQNDNA-REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
T+++T Y Q+ +EA+ LF + + S ++ + + +SVL AC ++
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMI------------SGHIRPNHFSFSSVLKACGNLSD 176
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
E + + +K G S VGN+LI YAR G ++ +RK FD + EK+ V++N+I+
Sbjct: 177 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 236
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YA+N + EA +F++ + T + +A T +++L A +G + G+ IH +++K +
Sbjct: 237 YAKNLKSEEAFLLFNE-IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKS 295
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ + ++I MY +CG ++ A + FN+M+++NV SWT+MI G+ H A AL++F+KM+
Sbjct: 296 NQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML 355
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ G +PN IT+V+VLSACSH G++ EG N+M E I P +EHY CMVDLLGR+G L
Sbjct: 356 ETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLL 415
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
EA + I M + AD +VW +LLGACR+H N +LG AA+ + E EP++ ++LLSN++
Sbjct: 416 VEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLH 475
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A+AG+W+DV + R MK R L K G S +E+ +VH F VG+ HPQ +IY+ L++L
Sbjct: 476 ASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLA 535
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
K++E+GY+ D V+HD+++E+KE L HSEK+A NLRVCG
Sbjct: 536 SKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCG 595
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCHT I+ IS REIVVRDS RFH+ K+G+CSC DYW
Sbjct: 596 DCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 121/211 (57%), Gaps = 14/211 (6%)
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
KVFD M E++ VTW +I +AQ G A +A+D+F M S V + T S+VL A L
Sbjct: 11 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYSSVLSACTEL 69
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC---GQVDLARKAFNQMKEKNVRSWT 360
G+L LGK +H +VI++ L V VG S++DMY KC G VD +RK F QM E NV SWT
Sbjct: 70 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 129
Query: 361 AMIAGYGMHCRA-REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
A+I Y +EA++LF KMI +RPN+ +F SVL AC + G +
Sbjct: 130 AIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTG-----EQVY 184
Query: 420 EFNIEPGVEHYGC----MVDLLGRAGKLKEA 446
+ ++ G+ C ++ + R+G++++A
Sbjct: 185 SYAVKLGIASVNCVGNSLISMYARSGRMEDA 215
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%)
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
A K F++M E+N+ +WT MI + AR+A+DLF M +G P+ T+ SVLSAC+
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 404 AGLVQEG 410
GL+ G
Sbjct: 69 LGLLALG 75
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/639 (39%), Positives = 376/639 (58%), Gaps = 44/639 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAI-KSCSAL 86
+F++ +K+ + WN++I+ + VE+++ F + S T +T I + + L
Sbjct: 176 VFDRMPEKDTIL-WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+L G Q H A G + +V + I +YSKCG++ A LF E R +IV++ +
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREF--RRPDIVAYNA 292
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG- 205
M+ GY N +L LFKE +L GA S + S V V+G
Sbjct: 293 MIHGYTSNGETELSLSLFKELML-----SGAKLKSSTL-------------VSLVPVSGH 334
Query: 206 --VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ HG+ +K F S V L Y++ ++ +RK+FD EK +WN++I+
Sbjct: 335 LMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y QNGL +A+ +F +M ++++ N VT++ +L A A LG L LGK +HD V D E
Sbjct: 395 YTQNGLTEDAISLFREM-QNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
S+ V T++I MY KCG + AR+ F+ M +KN +W MI+GYG+H +EAL +F +M+
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEML 513
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+G+ P +TF+ VL ACSHAGLV+EG N+M H + EP V+HY C+VD+LGRAG L
Sbjct: 514 NSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHL 573
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
+ A IE M ++ VW +LLGACRIHK+ +L ++KLFEL+P+N GYHVLLSNI+
Sbjct: 574 QRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIH 633
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
+ + R K R+LAK PG++L+E+ H F GD+ HPQ + I+E LE+L
Sbjct: 634 SADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLE 693
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
K++E GY + +HDV++EE+E+ +++HSE+LA NLRVC
Sbjct: 694 GKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCL 753
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCHT +LISK+ +R IVVRD+ RFH+FKDG+CSCGDYW
Sbjct: 754 DCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 213/441 (48%), Gaps = 20/441 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHS 91
V + +VF +N ++ + +L F+ +RK + L P ST+ AI + S D +
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA 137
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G H QA + G ++ + S ++ MY K + DARK+FD +P+ ++ + W +M++GY
Sbjct: 138 GCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE--KDTILWNTMISGY 195
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+N+ E++ +F++ + N +D+ + +L A + + + H
Sbjct: 196 RKNEMYVESIQVFRDLI-----------NESCTRLDTTTLLDILPAVAELQELRLGMQIH 244
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
K G S V I Y++ G + ++ +F D V +N++I Y NG
Sbjct: 245 SLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETE 304
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+L +F +++ S K + TL +++ HL ++ IH +K + V T++
Sbjct: 305 LSLSLFKELMLS-GAKLKSSTLVSLVPVSGHLMLIY---AIHGYSLKSNFLSHTSVSTAL 360
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+Y K +++ ARK F++ EK++ SW AMI+GY + +A+ LF +M + PN
Sbjct: 361 TTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNP 420
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+T +LSAC+ G + G W++ + + E + ++ + + G + EA L +
Sbjct: 421 VTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479
Query: 452 GMKVKADFVVWGSLLGACRIH 472
M K + V W +++ +H
Sbjct: 480 FMPKKNE-VTWNTMISGYGLH 499
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 152/314 (48%), Gaps = 13/314 (4%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H Q + GF D+ + + L S G + AR +F + QR ++ + ++ G+
Sbjct: 38 QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV-QR-PDVFLFNVLMRGFSV 95
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N++ +L +F S ++ +S A +SA S + HG
Sbjct: 96 NESPHSSLAVFAHL-----------RKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQ 144
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
I G DSE+ +G+ ++ Y + V+ +RKVFD M EKD + WN++I+ Y +N + E+
Sbjct: 145 AIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVES 204
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+ VF ++ + + + TL +L A+A L LRLG IH K V T I
Sbjct: 205 IQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFIS 264
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
+Y KCG++ +A F + + ++ ++ AMI GY + +L LF +++ +G + T
Sbjct: 265 LYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSST 324
Query: 394 FVSVLSACSHAGLV 407
VS++ H L+
Sbjct: 325 LVSLVPVSGHLMLI 338
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/654 (38%), Positives = 395/654 (60%), Gaps = 35/654 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
++++S K + T+ +F+ D+N + SW ++I G ++EA + + +M+
Sbjct: 86 NTLLSMYAKCGSLTDARRVFDSIRDRN-IVSWTAMIEAFVAGNKNLEAFKCYETMKLAGC 144
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P + TF + + + L G++ H + G + V ++L+ MY+KCG++S AR
Sbjct: 145 KPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARV 204
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FD +P++ N+V+WT ++ GY Q AL L + ++++E V + +
Sbjct: 205 IFDRLPEK--NVVTWTLLIAGYAQQGQVDVALELLET--MQQAE----------VAPNKI 250
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
AS+L C+ + H ++I+ G+ E+ V N+LI Y + G ++ +RK+F +
Sbjct: 251 TFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDL 310
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+D VTW +++ YAQ G EA+++F +M + +K + +T ++VL + + L+ G
Sbjct: 311 PHRDVVTWTAMVTGYAQLGFHDEAINLFRRM-QQQGIKPDKMTFTSVLTSCSSPAFLQEG 369
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY-GM 368
K IH Q++ V + ++++ MY KCG +D A FNQM E+NV +WTA+I G
Sbjct: 370 KRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQ 429
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H R REAL+ F +M K G++P+ +TF SVLSAC+H GLV+EG +M ++ I+P VE
Sbjct: 430 HGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVE 489
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HY C VDLLGRAG L+EA ++I M VWG+LL ACR+H +V+ GE AA+ + +L
Sbjct: 490 HYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKL 549
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
+P++ G +V LS+IYA AGR+ED E+ R +M+ R + K PG S +E+ GKVH F V DK
Sbjct: 550 DPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKS 609
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
HP+ E+IY L +L +++E+GYV D V+HDVD+E+KE L HSE+LA
Sbjct: 610 HPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTP 669
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCHT + ISKVV REI+ RD++RFH+F DG+CSCGD+W
Sbjct: 670 PGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 219/426 (51%), Gaps = 19/426 (4%)
Query: 45 IADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF 104
++ L + G EAL ++M F ++ C+ L L G++ H G
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
+ ++ + L+ MY+KCG L+DAR++FD I R RNIVSWT+M+ +V + EA +
Sbjct: 79 QPNRYLENTLLSMYAKCGSLTDARRVFDSI--RDRNIVSWTAMIEAFVAGNKNLEAFKCY 136
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
+ L + D V S+L+A + + + + H +++ G + E
Sbjct: 137 ETMKLAGCK------------PDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPR 184
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
VG +L+ YA+ G + +R +FD + EK+ VTW +IA YAQ G AL++ + M +
Sbjct: 185 VGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETM-QQA 243
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+V N +T +++L L GK +H +I+ + V S+I MYCKCG ++ A
Sbjct: 244 EVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEA 303
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
RK F+ + ++V +WTAM+ GY EA++LF +M + G++P+ +TF SVL++CS
Sbjct: 304 RKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSP 363
Query: 405 GLVQEGWHWLNTMGHE-FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWG 463
+QEG + H +N++ V +V + + G + +A L+ + + V W
Sbjct: 364 AFLQEGKRIHQQLVHAGYNLD--VYLQSALVSMYAKCGSMDDA-SLVFNQMSERNVVAWT 420
Query: 464 SLLGAC 469
+++ C
Sbjct: 421 AIITGC 426
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 9/251 (3%)
Query: 261 IAIYAQNGLAAEALDVFDQMV-KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+++ + G EAL + + M+ + T V + +L A L L G+ +H ++K
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSD--VFRGLLQECARLRSLEQGREVHAAILKS 76
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
++ + + +++ MY KCG + AR+ F+ ++++N+ SWTAMI + + EA +
Sbjct: 77 GIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCY 136
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH-WLNTMGHEFNIEPGVEHYGCMVDLLG 438
M AG +P+ +TFVS+L+A ++ L+Q G + + +EP V +V +
Sbjct: 137 ETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG--TSLVGMYA 194
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD--LGEIAAKKLFELEPNNCGYH 496
+ G + +A + + + K + V W L+ VD L + + E+ PN +
Sbjct: 195 KCGDISKARVIFDRLPEK-NVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFA 253
Query: 497 VLLSNIYANAG 507
+L A
Sbjct: 254 SILQGCTTPAA 264
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/636 (38%), Positives = 379/636 (59%), Gaps = 36/636 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ +++ V WN++I+ +R +++R F M + L+ +T + + + L
Sbjct: 170 VFDVMPERDTVL-WNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQ 228
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G A G H DV+V + LI +YSKCG+ R LFD+I Q +++S+ +M
Sbjct: 229 EYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQP--DLISYNAM 286
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY N A+ LF+E L G NS + V + V + + ++ +
Sbjct: 287 ISGYTFNHETESAVTLFRELL-----ASGQRVNSSTL----VGLIPVYLPFNHLQLSRLI 337
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ +K G + V L Y R V +R++FD EK +WN++I+ Y QN
Sbjct: 338 QN---LSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQN 394
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL A+ +F +M+ + N VT++++L A A LG L +GK +H + LE +V V
Sbjct: 395 GLTDRAISLFQEMMP--QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYV 452
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
T+++DMY KCG + AR+ F+ M +KNV +W AMI GYG+H +EAL LFY+M+++G+
Sbjct: 453 STALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGI 512
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P +TF+S+L ACSH+GLV EG ++M + + +P EHY CMVD+LGRAG+L A
Sbjct: 513 PPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNAL 572
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ IE M ++ VWG+LLGAC IHKN ++ +A+K+LF+L+P N GY+VLLSNIY+
Sbjct: 573 EFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDR 632
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+ R ++K R+LAKTPG +L+E+ + + F GD+ HPQ I+E LE+L K++
Sbjct: 633 NFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMR 692
Query: 568 EVGYVTD-MTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
E GY + +T+ +HDV+ EEKE+ + +HSEKLA NLRVC DCH
Sbjct: 693 EAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCH 752
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
T + ISK+ +R IVVRD+ RFH+FK+G+CSCGDYW
Sbjct: 753 TATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 236/462 (51%), Gaps = 23/462 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSAL 86
LFNK V K ++F +N +I + G ++ ++ +RK + L P T+ AI + S L
Sbjct: 68 LFNK-VSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRL 126
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D G H + + G ++FV SA++D+Y K ARK+FD +P+ R+ V W +
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPE--RDTVLWNT 184
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M++G+ +N +++ +F + L + G + DS +A+VL+A + + +
Sbjct: 185 MISGFSRNSYFEDSIRVFVDML----DVG--------LSFDSTTLATVLTAVAELQEYRL 232
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
G K+G S+V V LI Y++ G R +FD + + D +++N++I+ Y
Sbjct: 233 GMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTF 292
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
N A+ +F +++ S + N+ TL ++ L+L + I + +K+ +
Sbjct: 293 NHETESAVTLFRELLASGQ-RVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPS 351
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V T++ +YC+ +V AR+ F++ EK++ SW AMI+GY + A+ LF +M+
Sbjct: 352 VSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ- 410
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+ PN +T S+LSAC+ G + G W++ + +E V +VD+ + G + EA
Sbjct: 411 LSPNPVTVTSILSACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEA 469
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
L + M V + V W +++ +H + G+ A K +E+
Sbjct: 470 RQLFDLM-VDKNVVTWNAMITGYGLHGH---GKEALKLFYEM 507
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 150/306 (49%), Gaps = 14/306 (4%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q Q + G H D+ + L + G ++ R+LF+++ + ++ + ++ G+
Sbjct: 32 QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKP--DLFLFNVLIRGFSD 89
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N + ++ L+ N+ D+ A +SA SR+ V H
Sbjct: 90 NGLPKSSIFLYTHL-----------RKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAH 138
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
I G S + VG+ ++D Y + +++RKVFD M E+D V WN++I+ +++N ++
Sbjct: 139 SIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDS 198
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+ VF M+ + ++ TL+ VL A+A L RLG I K L V V T +I
Sbjct: 199 IRVFVDML-DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLIS 257
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
+Y KCG+ R F+Q+ + ++ S+ AMI+GY + A+ LF +++ +G R N T
Sbjct: 258 LYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317
Query: 394 FVSVLS 399
V ++
Sbjct: 318 LVGLIP 323
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 91/166 (54%)
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G V R++F+ + + D +N +I ++ NGL ++ ++ + K T+++ + T +
Sbjct: 60 GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFA 119
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
+ A + L R+G +H I + ++ VG++I+D+Y K + +LARK F+ M E++
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDT 179
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
W MI+G+ + +++ +F M+ G+ + T +VL+A +
Sbjct: 180 VLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVA 225
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/679 (39%), Positives = 384/679 (56%), Gaps = 68/679 (10%)
Query: 21 TNTNLTTLFNKY------------VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
TN L T++ + D ++ SWN+VI+ L++ EAL M
Sbjct: 470 TNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDG 529
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFG-FHRDVFVSSALIDMYSKCGELSDA 127
+ P T + +CS L L G++ H A G + FV +AL+DMY C +
Sbjct: 530 VRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKG 589
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R +FD + +R + W ++L GY +N+ +AL LF E + E C A+
Sbjct: 590 RLVFDGVVRR--TVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNAT--------- 638
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
ASVL AC R V EG HG+++KRGF + V N L+D Y+R G V++S+ +F
Sbjct: 639 --TFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFG 696
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK-----------------STDVKCNA 290
M ++D V+WN++I G +AL++ +M + K N+
Sbjct: 697 RMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNS 756
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
VTL VL A L L GK IH +K L V VG++++DMY KCG ++LA + F+Q
Sbjct: 757 VTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQ 816
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG------VRPNYITFVSVLSACSHA 404
M +NV +W +I YGMH + EAL+LF M G +RPN +T++++ +ACSH+
Sbjct: 817 MPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHS 876
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV-VWG 463
G+V EG H +TM +EP +HY C+VDLLGR+G++KEAY+LI M + V W
Sbjct: 877 GMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWS 936
Query: 464 SLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRR 523
SLLGACRIH++V+ GEIAAK LF LEPN ++VL+SNIY++AG W+ R MK
Sbjct: 937 SLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMG 996
Query: 524 LAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVD 583
+ K PG S +E +VH FL GD HPQ ++++EYLE L+ ++++ GYV D++ V+H+VD
Sbjct: 997 VRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVD 1056
Query: 584 QEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVR 625
EEKE L HSE+LA NLRVC DCH ++ISK+VDREI++R
Sbjct: 1057 DEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILR 1116
Query: 626 DSKRFHYFKDGLCSCGDYW 644
D +RFH+F +G CSCGDYW
Sbjct: 1117 DVRRFHHFANGTCSCGDYW 1135
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/466 (31%), Positives = 234/466 (50%), Gaps = 33/466 (7%)
Query: 14 SNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTR 73
S++ H L T V++ + W ++ +A+ +++M P
Sbjct: 271 SSLQTHPLTLTLPTPPPTTVERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDN 330
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGF--HRDVFVSSALIDMYSKCGELSDARKLF 131
FP +K+ +A+HDL GKQ H F FG V V+++L++MY KCG+L+ AR++F
Sbjct: 331 FAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVF 390
Query: 132 DEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAI 191
D+IP R+ VSW SM+ + + +L LF+ L S+NV S +
Sbjct: 391 DDIPD--RDHVSWNSMIATLCRFEEWELSLHLFRLML------------SENVDPTSFTL 436
Query: 192 ASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
SV ACS V GV G H + ++ G D N L+ YAR G V+ ++ +F
Sbjct: 437 VSVAHACSHVR-GGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVF 494
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
KD V+WN++I+ +QN EAL ++ ++ V+ + VTL++VL A + L LR+G
Sbjct: 495 DGKDLVSWNTVISSLSQNDRFEEAL-MYVYLMIVDGVRPDGVTLASVLPACSQLERLRIG 553
Query: 310 KCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
+ IH ++ DL E+ VGT+++DMYC C Q R F+ + + V W A++AGY
Sbjct: 554 REIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYAR 613
Query: 369 HCRAREALDLFYKMI-KAGVRPNYITFVSVLSACSHAGLV--QEGWHWLNTMGHEFNIEP 425
+ +AL LF +MI ++ PN TF SVL AC + +EG H G+
Sbjct: 614 NEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIH-----GYIVKRGF 668
Query: 426 GVEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G + Y ++D+ R G++ E I G K D V W +++ C
Sbjct: 669 GKDKYVQNALMDMYSRMGRV-EISKTIFGRMNKRDIVSWNTMITGC 713
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 19/160 (11%)
Query: 2 KLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
KL+ +V S + ++ NL + + NV +WN +I G EAL F
Sbjct: 786 KLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELF 845
Query: 62 SSM------RKLSLTPTRSTFPCAIKSCS-------ALHDLHSGKQAHQQAFIFGFHRDV 108
M + + P T+ +CS LH H+ K +H G
Sbjct: 846 RIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASH------GVEPRG 899
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
+ L+D+ + G + +A +L + +P + + +W+S+L
Sbjct: 900 DHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLL 939
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/654 (40%), Positives = 390/654 (59%), Gaps = 36/654 (5%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
+++V+S K N +F + K+ V SW +++A A+ G + AL+ M++
Sbjct: 183 MTAVMSLYAKCRQIDNAYKMFERMQHKDLV-SWTTLVAGYAQNGHAKRALQLVLQMQEAG 241
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
P T + + + + L G+ H AF GF V V++AL+DMY KCG AR
Sbjct: 242 QKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIAR 301
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
+F + R + +VSW +M+ G QN + EA F + +L+E E
Sbjct: 302 LVFKGM--RSKTVVSWNTMIDGCAQNGESEEAFATFLK-MLDEGEVP-----------TR 347
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
V + VL AC+ + H + K DS V V N+LI Y++ VD++ +F+
Sbjct: 348 VTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNN 407
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
+ EK VTWN++I YAQNG EAL++F M++S +K + TL V+ A+A V R
Sbjct: 408 L-EKTNVTWNAMILGYAQNGCVKEALNLF-CMMQSQGIKLDCFTLVGVITALADFSVNRQ 465
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
K IH ++ ++ +V V T+++DMY KCG + ARK F+ M+E++V +W AMI GYG
Sbjct: 466 AKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGT 525
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H +E LDLF +M K V+PN ITF+SV+SACSH+G V+EG +M ++ +EP ++
Sbjct: 526 HGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMD 585
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HY MVDLLGRAG+L +A++ I+ M +K V G++LGAC+IHKNV+LGE AA+KLF+L
Sbjct: 586 HYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKL 645
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
+P+ GYHVLL+NIYA+ W+ V + R+ M+++ L KTPG S VELR ++H F G
Sbjct: 646 DPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTN 705
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
HP+ +KIY +LE L +++ GYV D S IHDV+++ K+ L HSE+LA
Sbjct: 706 HPESKKIYAFLETLGDEIKAAGYVPDPDS-IHDVEEDVKKQLLSSHSERLAIAFGLLNTS 764
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH + IS V REI+VRD +RFH+FK+G CSCGDYW
Sbjct: 765 PGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/463 (29%), Positives = 240/463 (51%), Gaps = 19/463 (4%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+ V+S K +N+ +F K +V ++ ++ A+ +AL F M +
Sbjct: 83 TKVISLFCKFGSNSEAARVFEHVELKLDVL-YHIMLKGYAKNSSLGDALCFFLRMMCDEV 141
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
+ C ++ C DL G++ H GF ++FV +A++ +Y+KC ++ +A K
Sbjct: 142 RLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYK 201
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F+ + +++VSWT+++ GY QN +A+ AL + +L+ E G DSV
Sbjct: 202 MFERMQH--KDLVSWTTLVAGYAQNGHAKRAL----QLVLQMQEAGQKP--------DSV 247
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
+ S+L A + + + HG+ + GF+S V V N L+D Y + G ++R VF GM
Sbjct: 248 TLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGM 307
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
K V+WN++I AQNG + EA F +M+ +V VT+ VLLA A+LG L G
Sbjct: 308 RSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVP-TRVTMMGVLLACANLGDLERG 366
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
+H + K+ L+ +V V S+I MY KC +VD+A FN +++ NV +W AMI GY +
Sbjct: 367 WFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQN 425
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
+EAL+LF M G++ + T V V++A + + ++ W++ + ++ V
Sbjct: 426 GCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQA-KWIHGLAVRACMDNNVFV 484
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+VD+ + G +K A L + M+ + + W +++ H
Sbjct: 485 STALVDMYAKCGAIKTARKLFDMMQER-HVITWNAMIDGYGTH 526
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 172/344 (50%), Gaps = 19/344 (5%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQ-QAFIF--GFHRDVFVSSALIDMYSKCGELSDA 127
PTR + S L + S K+ +Q FI GF+ + + +I ++ K G S+A
Sbjct: 40 PTR-VYSHRHPSVVLLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEA 98
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
++F+ + ++ V + ML GY +N + +AL F + +E V +
Sbjct: 99 ARVFEHVELKLD--VLYHIMLKGYAKNSSLGDALCFFLRMMCDE------------VRLV 144
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
A +L C HG +I GF+S + V ++ YA+ +D + K+F+
Sbjct: 145 VGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFE 204
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
M KD V+W +++A YAQNG A AL + QM ++ K ++VTL ++L A+A + LR
Sbjct: 205 RMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQ-KPDSVTLVSILPAVADMKALR 263
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
+G+ IH + E V V +++DMY KCG +AR F M+ K V SW MI G
Sbjct: 264 IGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCA 323
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
+ + EA F KM+ G P +T + VL AC++ G ++ GW
Sbjct: 324 QNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGW 367
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 151/309 (48%), Gaps = 19/309 (6%)
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
F+IK GF +E +I + + G + +VF+ + K V ++ ++ YA+N +
Sbjct: 69 FIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGD 128
Query: 273 ALDVFDQMVKSTDVKCNAVTL----SAVLLAIAHLGV-LRLGKCIHDQVIKMDLEESVIV 327
AL F +M+ C+ V L A LL + + L+ G+ IH +I E ++ V
Sbjct: 129 ALCFFLRMM------CDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFV 182
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
T+++ +Y KC Q+D A K F +M+ K++ SWT ++AGY + A+ AL L +M +AG
Sbjct: 183 MTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQ 242
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF--NIEPGVEHYGCMVDLLGRAGKLKE 445
+P+ +T VS+L A + ++ G + G+ F E V ++D+ + G +
Sbjct: 243 KPDSVTLVSILPAVADMKALRIG---RSIHGYAFRSGFESLVNVTNALLDMYFKCGSARI 299
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A + +GM+ K V W +++ C +N + E A L L+ V + +
Sbjct: 300 ARLVFKGMRSKT-VVSWNTMIDGCA--QNGESEEAFATFLKMLDEGEVPTRVTMMGVLLA 356
Query: 506 AGRWEDVER 514
D+ER
Sbjct: 357 CANLGDLER 365
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/636 (38%), Positives = 379/636 (59%), Gaps = 36/636 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ +++ V WN++I+ +R +++R F M + L+ +T + + + L
Sbjct: 170 VFDVMPERDTVL-WNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQ 228
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G A G H DV+V + LI +YSKCG+ R LFD+I Q +++S+ +M
Sbjct: 229 EYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQP--DLISYNAM 286
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY N A+ LF+E L G NS + V + V + + ++ +
Sbjct: 287 ISGYTFNHETESAVTLFRELL-----ASGQRVNSSTL----VGLIPVYLPFNHLQLSRLI 337
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ +K G + V L Y R V +R++FD EK +WN++I+ Y QN
Sbjct: 338 QN---LSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQN 394
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL A+ +F +M+ + N VT++++L A A LG L +GK +H + LE +V V
Sbjct: 395 GLTDRAISLFQEMMP--QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYV 452
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
T+++DMY KCG + AR+ F+ M +KNV +W AMI GYG+H +EAL LFY+M+++G+
Sbjct: 453 STALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGI 512
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P +TF+S+L ACSH+GLV EG ++M + + +P EHY CMVD+LGRAG+L A
Sbjct: 513 PPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNAL 572
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ IE M ++ VWG+LLGAC IHKN ++ +A+K+LF+L+P N GY+VLLSNIY+
Sbjct: 573 EFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDR 632
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+ R ++K R+LAKTPG +L+E+ + + F GD+ HPQ I+E LE+L K++
Sbjct: 633 NFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMR 692
Query: 568 EVGYVTD-MTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
E GY + +T+ +HDV+ EEKE+ + +HSEKLA NLRVC DCH
Sbjct: 693 EAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCH 752
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
T + ISK+ +R IVVRD+ RFH+FK+G+CSCGDYW
Sbjct: 753 TATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 236/462 (51%), Gaps = 23/462 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK-LSLTPTRSTFPCAIKSCSAL 86
LFNK V K ++F +N +I + G ++ ++ +RK +L P T+ AI + S L
Sbjct: 68 LFNK-VSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRL 126
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D G H + + G ++FV SA++D+Y K ARK+FD +P+ R+ V W +
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPE--RDTVLWNT 184
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M++G+ +N +++ +F + L + G + DS +A+VL+A + + +
Sbjct: 185 MISGFSRNSYFEDSIRVFVDML----DVG--------LSFDSTTLATVLTAVAELQEYRL 232
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
G K+G S+V V LI Y++ G R +FD + + D +++N++I+ Y
Sbjct: 233 GMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTF 292
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
N A+ +F +++ S + N+ TL ++ L+L + I + +K+ +
Sbjct: 293 NHETESAVTLFRELLASGQ-RVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPS 351
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V T++ +YC+ +V AR+ F++ EK++ SW AMI+GY + A+ LF +M+
Sbjct: 352 VSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ- 410
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+ PN +T S+LSAC+ G + G W++ + +E V +VD+ + G + EA
Sbjct: 411 LSPNPVTVTSILSACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEA 469
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
L + M V + V W +++ +H + G+ A K +E+
Sbjct: 470 RQLFDLM-VDKNVVTWNAMITGYGLHGH---GKEALKLFYEM 507
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 150/306 (49%), Gaps = 14/306 (4%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q Q + G H D+ + L + G ++ R+LF+++ + ++ + ++ G+
Sbjct: 32 QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKP--DLFLFNVLIRGFSD 89
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N + ++ L+ N+ D+ A +SA SR+ V H
Sbjct: 90 NGLPKSSIFLYTHL-----------RKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAH 138
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
I G S + VG+ ++D Y + +++RKVFD M E+D V WN++I+ +++N ++
Sbjct: 139 SIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDS 198
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+ VF M+ + ++ TL+ VL A+A L RLG I K L V V T +I
Sbjct: 199 IRVFVDML-DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLIS 257
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
+Y KCG+ R F+Q+ + ++ S+ AMI+GY + A+ LF +++ +G R N T
Sbjct: 258 LYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317
Query: 394 FVSVLS 399
V ++
Sbjct: 318 LVGLIP 323
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 91/166 (54%)
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G V R++F+ + + D +N +I ++ NGL ++ ++ + K T+++ + T +
Sbjct: 60 GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFA 119
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
+ A + L R+G +H I + ++ VG++I+D+Y K + +LARK F+ M E++
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDT 179
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
W MI+G+ + +++ +F M+ G+ + T +VL+A +
Sbjct: 180 VLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVA 225
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/660 (39%), Positives = 382/660 (57%), Gaps = 59/660 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF +VD++ V SWN++I+ ++ EAL F M + T + +CS L
Sbjct: 253 LFESFVDRDMV-SWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLE 311
Query: 88 DLHSGKQAHQQAFIF---GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
L GK+ H A++ + FV SAL+DMY C ++ R++FD I R I W
Sbjct: 312 RLDVGKEIH--AYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGR--RIELW 367
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
+M++GY +N +AL+LF E + + ++ +ASV+ AC
Sbjct: 368 NAMISGYARNGLDEKALILFIEMI-----------KVAGLLPNTTTMASVMPACVHCEAF 416
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
E HG+ +K GF + V N L+D Y+R G +D+S +FD M +D V+WN++I Y
Sbjct: 417 SNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGY 476
Query: 265 AQNGLAAEALDVFDQMVKSTDV----------------KCNAVTLSAVLLAIAHLGVLRL 308
+G + AL + +M + + K NA+TL VL A L +
Sbjct: 477 VLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAK 536
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK IH I+ L + VG++++DMY KCG ++L+R+ FN+M KNV +W +I GM
Sbjct: 537 GKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGM 596
Query: 369 HCRAREALDLFYKMI-KAG----VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
H + EAL+LF M+ +AG +PN +TF++V +ACSH+GL+ EG + M H+ +
Sbjct: 597 HGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGV 656
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV-VWGSLLGACRIHKNVDLGEIAA 482
EP +HY C+VDLLGRAG+L+EAY+L+ M + D V W SLLGACRIH+NV+LGE+AA
Sbjct: 657 EPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAA 716
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
K L LEPN ++VLLSNIY++AG W R M+ + K PG S +E R +VH F
Sbjct: 717 KNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKF 776
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
+ GD HPQ E+++ +LE L+ K+++ GYV D + V+H+VD++EKE L HSEKLA
Sbjct: 777 MAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAF 836
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + ISK+++REI+VRD +RFH+FK+G CSCGDYW
Sbjct: 837 GILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 233/437 (53%), Gaps = 32/437 (7%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SW + R D EA+ + M P FP +K+ S L DL +G+Q H A
Sbjct: 59 SWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAA 118
Query: 100 FIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR 158
FG+ V V++ L++MY KCG + D K+FD I R+ VSW S + + +
Sbjct: 119 VKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITD--RDQVSWNSFIAALCRFEKWE 176
Query: 159 EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV-NGVTEGA--HGFVI 215
+AL F+ +E N+ + S + SV ACS + V +G+ G HG+ +
Sbjct: 177 QALEAFRAMQME------------NMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSL 224
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+ G D + N L+ YA+ G VD S+ +F+ +++D V+WN++I+ ++Q+ +EAL
Sbjct: 225 RVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALA 283
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDM 334
F MV V+ + VT+++VL A +HL L +GK IH V++ DL E+ VG++++DM
Sbjct: 284 FFRLMVLE-GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDM 342
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK-AGVRPNYIT 393
YC C QV+ R+ F+ + + + W AMI+GY + +AL LF +MIK AG+ PN T
Sbjct: 343 YCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTT 402
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDL 449
SV+ AC H E + ++ H + ++ G + ++D+ R GK+ + +
Sbjct: 403 MASVMPACVHC----EAFSNKESI-HGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETI 457
Query: 450 IEGMKVKADFVVWGSLL 466
+ M+V+ D V W +++
Sbjct: 458 FDSMEVR-DRVSWNTMI 473
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 143/285 (50%), Gaps = 22/285 (7%)
Query: 127 ARKLFDEIPQRI----RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
A L + P + R+ SW L ++++ REA+ + E + GA
Sbjct: 39 ASPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVS-----GARP--- 90
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF-DSEVGVGNTLIDAYARGGHVDV 241
D+ A +VL A S + E H +K G+ S V V NTL++ Y + G +
Sbjct: 91 ----DNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGD 146
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
KVFD + ++D V+WNS IA + +AL+ F M + +++ ++ TL +V LA +
Sbjct: 147 VCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAM-QMENMELSSFTLVSVALACS 205
Query: 302 HLGV---LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
+LGV LRLGK +H +++ ++ +++ MY K G+VD ++ F ++++ S
Sbjct: 206 NLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVS 264
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
W MI+ + R EAL F M+ GV + +T SVL ACSH
Sbjct: 265 WNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSH 309
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL-EESVIVGTS 330
EA+ + +M S + + AVL A++ L L+ G+ IH +K SV V +
Sbjct: 75 EAISTYIEMTVS-GARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANT 133
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+++MY KCG + K F+++ +++ SW + IA + +AL+ F M + +
Sbjct: 134 LVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELS 193
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY---GCMVDLLGRAGKLKEAY 447
T VSV ACS+ G V G L H +++ G + ++ + + G++ ++
Sbjct: 194 SFTLVSVALACSNLG-VMHGLR-LGKQLHGYSLRVGDQKTFTNNALMAMYAKLGRVDDSK 251
Query: 448 DLIEGMKVKADFVVWGSLLGA 468
L E V D V W +++ +
Sbjct: 252 ALFESF-VDRDMVSWNTMISS 271
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 257/664 (38%), Positives = 391/664 (58%), Gaps = 64/664 (9%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + + N+ WN++ A D V AL+ + M L L P TFP +KSC+
Sbjct: 92 KTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFK 151
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR------------- 137
G+Q H G D++V ++LI MY + G L DA K+FD+ P R
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 211
Query: 138 ----------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
++++VSW +M++GY + N +EAL LFK+ +
Sbjct: 212 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM------------K 259
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
NV D + +V+SAC++ + H ++ GF S + + N LID Y++ G ++
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ +F+ + KD ++WN++I Y L EAL +F +M++S + N VT+ ++L A A
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP-NDVTMLSILPACA 378
Query: 302 HLGVLRLGKCIH---DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
HLG + +G+ IH D+ +K + + + TS+IDMY KCG ++ A + FN + K++ S
Sbjct: 379 HLGAIDIGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS 437
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
W AMI G+ MH RA + DLF +M K G++P+ ITFV +LSACSH+G++ G H TM
Sbjct: 438 WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT 497
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
++ + P +EHYGCM+DLLG +G KEA ++I M+++ D V+W SLL AC++H NV+LG
Sbjct: 498 QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELG 557
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
E A+ L ++EP N G +VLLSNIYA+AGRW +V +TR+L+ ++ + K PG S +E+
Sbjct: 558 ESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSV 617
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
VH F++GDK HP++ +IY LEE+ V L++ G+V D + V+ ++++E KE LR HSEKL
Sbjct: 618 VHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKL 677
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVC +CH +LISK+ REI+ RD RFH+F+DG+CSC
Sbjct: 678 AIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSC 737
Query: 641 GDYW 644
DYW
Sbjct: 738 NDYW 741
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 115/254 (45%), Gaps = 19/254 (7%)
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F + S+D +++ L + + L+ + IH Q+IK+ L + + +I+ +C
Sbjct: 17 FHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIE-FC 75
Query: 337 KCGQ----VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+ A F ++E N+ W M G+ + AL L+ MI G+ PN
Sbjct: 76 ILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSY 135
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY--GCMVDLLGRAGKLKEAYDLI 450
TF VL +C+ + +EG GH + ++ Y ++ + + G+L++A+ +
Sbjct: 136 TFPFVLKSCAKSKAFKEGQ---QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP--NNCGYHVLLSNIYANAGR 508
+ + D V + +L+ ++ A+KLF+ P + ++ ++S YA G
Sbjct: 193 DKSPHR-DVVSYTALIKGYASRGYIE----NAQKLFDEIPVKDVVSWNAMISG-YAETGN 246
Query: 509 W-EDVERTRSLMKN 521
+ E +E + +MK
Sbjct: 247 YKEALELFKDMMKT 260
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/641 (41%), Positives = 375/641 (58%), Gaps = 33/641 (5%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
+TN + L V + N+F WN++I L +A+ + SMR P T P +K
Sbjct: 63 STNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLK 122
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI 141
+C+ D+ G + H G+ DVFV ++L+ +Y KC DA K+FD+IP + N+
Sbjct: 123 ACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK--NV 180
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
VSWT+++TGY+ + + REA+ FK+ L E G + DS ++ VL+AC+R+
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFKKLL----EMG--------LKPDSFSLVKVLAACARL 228
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSII 261
E ++ G V V +L+D Y + G+++ + +F M EKD V+W+++I
Sbjct: 229 GDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMI 288
Query: 262 AIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL 321
YA NGL +ALD+F QM +S ++K + T+ VL A A LG L LG + + +
Sbjct: 289 QGYAFNGLPQQALDLFFQM-QSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEF 347
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK 381
+ ++GT++IDMY KCG V A + F MK+K+ W AM+ G M+ A+ LF
Sbjct: 348 LSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSL 407
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
+ K G+RP+ TF+ +L C+H G V EG + N M F++ P +EHYGCMVDLLGRAG
Sbjct: 408 VEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAG 467
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSN 501
L EA+ LI M +K + VVWG+LLG C++HK+ L E KKL ELEP N G +V LSN
Sbjct: 468 LLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSN 527
Query: 502 IYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEE 561
IY+ RWE+ E+ RS MK +++ K S +E+ G VH FLVGDK H EKIY L+E
Sbjct: 528 IYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDE 587
Query: 562 LNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRV 603
L +L+ VG+V V+ D+++EEKE L HSEKLA NLRV
Sbjct: 588 LGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRV 647
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CGDCH I+LISK+ REI++RD+ RFH F DG CSC DYW
Sbjct: 648 CGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K IH +++++ L++ + I+ G + ++ F+Q+KE N+ W MI G
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
+A+ L+ M G PN T VL AC+
Sbjct: 93 DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACA 125
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/641 (41%), Positives = 374/641 (58%), Gaps = 33/641 (5%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
+TN + L V + N+F WN++I L +A+ + SMR P T P +K
Sbjct: 63 STNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLK 122
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI 141
+C+ D+ G + H G+ DVFV ++L+ +Y KC DA K+FD+IP + N+
Sbjct: 123 ACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK--NV 180
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
VSWT+++TGY+ + + REA+ FK+ L E G + DS ++ VL+AC+R+
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFKKLL----EMG--------LKPDSFSLVKVLAACARL 228
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSII 261
E ++ G V V +L+D Y + G+++ + +F M EKD V+W+++I
Sbjct: 229 GDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMI 288
Query: 262 AIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL 321
YA NGL +ALD+F QM +S ++K + T+ VL A A LG L LG + + +
Sbjct: 289 QGYAFNGLPQQALDLFFQM-QSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEF 347
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK 381
+ ++GT++IDMY KCG V A + F MK K+ W AM+ G M+ A+ LF
Sbjct: 348 LSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSL 407
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
+ K G+RP+ TF+ +L C+H G V EG + N M F++ P +EHYGCMVDLLGRAG
Sbjct: 408 VEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAG 467
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSN 501
L EA+ LI M +K + VVWG+LLG C++HK+ L E KKL ELEP N G +V LSN
Sbjct: 468 LLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSN 527
Query: 502 IYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEE 561
IY+ RWE+ E+ RS MK +++ K S +E+ G VH FLVGDK H EKIY L+E
Sbjct: 528 IYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDE 587
Query: 562 LNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRV 603
L +L+ VG+V V+ D+++EEKE L HSEKLA NLRV
Sbjct: 588 LGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRV 647
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CGDCH I+LISK+ REI++RD+ RFH F DG CSC DYW
Sbjct: 648 CGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K IH +++++ L++ + I+ G + ++ F+Q+KE N+ W MI G
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
+A+ L+ M G PN T VL AC+
Sbjct: 93 DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACA 125
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 257/630 (40%), Positives = 367/630 (58%), Gaps = 33/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ NV WN ++ + E+ + F+ M+ + P + T+P +++CS+L + G
Sbjct: 433 TETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLG 492
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H Q GF +V+VSS LIDMY+K G+L A K+F + ++ ++VSWT+M+ GY
Sbjct: 493 EQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEK--DVVSWTAMIAGYA 550
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q++ EAL LFKE + D++ AS +SAC+ + + H
Sbjct: 551 QHEKFAEALNLFKEM------------QDQGIHSDNIGFASAISACAGIQALNQGQQIHA 598
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
G+ ++ VGN L+ YAR G V + FD + KD ++WNS+I+ +AQ+G E
Sbjct: 599 QACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEE 658
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL +F QM K+ + N+ T + A A++ ++LGK IH +IK + V +I
Sbjct: 659 ALSLFSQMSKAGQ-EINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLI 717
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+Y KCG +D A + F +M EKN SW AM+ GY H +AL LF M + GV PN++
Sbjct: 718 TLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHV 777
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TFV VLSACSH GLV EG + +M + P EHY C+VDLLGR+G L A +E
Sbjct: 778 TFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEE 837
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M ++ D +V +LL AC +HKN+D+GE AA L ELEP + +VLLSN+YA G+W
Sbjct: 838 MPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCR 897
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+RTR +MK+R + K PG S +E+ VHAF GD++HP +KIYEYL +LN E GY+
Sbjct: 898 DRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYI 957
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
S+++D ++ +K T IHSEKLA NLRVCGDCH I+ +
Sbjct: 958 PQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYV 1017
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+ DR IVVRDS RFH+FK G+CSC DYW
Sbjct: 1018 SKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 221/437 (50%), Gaps = 24/437 (5%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH-DLHSGKQAHQQA 99
WN V+ G + L F M + + P T+ ++ C H ++ H +
Sbjct: 137 WNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHART 196
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G+ +FV + LID+Y K G L+ A+K+FD + +R + VSW +ML+G Q+ E
Sbjct: 197 ITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKR--DSVSWVAMLSGLSQSGCEEE 254
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+LLF + ++ V+ +SVLSAC++V V E HG V+K+GF
Sbjct: 255 AVLLFCQM------------HTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGF 302
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
E V N L+ Y+R G+ + +VF+ M+++D V++NS+I+ +Q G + +AL++F +
Sbjct: 303 SLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKK 362
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M +K + VT++++L A + +G L +GK H IK + +I+ +++D+Y KC
Sbjct: 363 MCLDC-LKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCS 421
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+ A + F + +NV W M+ YG+ E+ +F +M G+ PN T+ S+L
Sbjct: 422 DIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILR 481
Query: 400 ACSHAGLVQEGWHWLNTM---GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
CS V G + G +FN+ ++D+ + GKL A + +K K
Sbjct: 482 TCSSLRAVDLGEQIHTQVLKTGFQFNVYVS----SVLIDMYAKLGKLDHALKIFRRLKEK 537
Query: 457 ADFVVWGSLLGACRIHK 473
D V W +++ H+
Sbjct: 538 -DVVSWTAMIAGYAQHE 553
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 136/441 (30%), Positives = 224/441 (50%), Gaps = 31/441 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K + SW ++++ L++ G EA+ F M + PT F + +C+ + G
Sbjct: 231 LQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVG 290
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H GF + +V +AL+ +YS+ G A ++F+ + Q R+ VS+ S+++G
Sbjct: 291 EQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQ--RDEVSYNSLISGLS 348
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q + +AL LFK+ L D + D V +AS+LSACS V V + H
Sbjct: 349 QQGYSDKALELFKKMCL------------DCLKPDCVTVASLLSACSSVGALLVGKQFHS 396
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ IK G S++ + L+D Y + + + + F ++ V WN ++ Y E
Sbjct: 397 YAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNE 456
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
+ +F QM + ++ N T ++L + L + LG+ IH QV+K + +V V + +I
Sbjct: 457 SFKIFTQM-QMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLI 515
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY K G++D A K F ++KEK+V SWTAMIAGY H + EAL+LF +M G+ + I
Sbjct: 516 DMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNI 575
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG-------CMVDLLGRAGKLKE 445
F S +SAC+ G LN G + + + V Y +V L R GK+++
Sbjct: 576 GFASAISACA-------GIQALN-QGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRD 627
Query: 446 AYDLIEGMKVKADFVVWGSLL 466
AY + + K D + W SL+
Sbjct: 628 AYFAFDKIFSK-DNISWNSLI 647
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 188/367 (51%), Gaps = 16/367 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN + ++ V S+NS+I+ L++ G S +AL F M L P T + +CS++
Sbjct: 328 VFNAMLQRDEV-SYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVG 386
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GKQ H A G D+ + AL+D+Y KC ++ A + F + N+V W M
Sbjct: 387 ALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFF--LSTETENVVLWNVM 444
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
L Y DN E+ +F + +E E + S+L CS + +
Sbjct: 445 LVAYGLLDNLNESFKIFTQMQMEGIE------------PNQFTYPSILRTCSSLRAVDLG 492
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
E H V+K GF V V + LID YA+ G +D + K+F + EKD V+W ++IA YAQ+
Sbjct: 493 EQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQH 552
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
AEAL++F +M + + + + ++ + A A + L G+ IH Q + + V
Sbjct: 553 EKFAEALNLFKEM-QDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSV 611
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G +++ +Y +CG+V A AF+++ K+ SW ++I+G+ EAL LF +M KAG
Sbjct: 612 GNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQ 671
Query: 388 RPNYITF 394
N TF
Sbjct: 672 EINSFTF 678
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/508 (24%), Positives = 234/508 (46%), Gaps = 37/508 (7%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEA--L 58
M ++ + S+V+ + + ++ F K+++ N S+ A D EA +
Sbjct: 1 MYITIKTYFKSIVNKIKQFRPVVSIFFFFQKFLEHNTALSY-------AYSNDEGEANGI 53
Query: 59 RAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMY 118
M + + T+ + C + G + H + GF +V + L+D+Y
Sbjct: 54 NFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLY 113
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
G+L A +FDE+P +R + W +L +V A L LF+ L E+
Sbjct: 114 IAFGDLDGAVTVFDEMP--VRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEK------- 164
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVN-GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
V D A VL C V E H I G+++ + V N LID Y + G
Sbjct: 165 -----VKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNG 219
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
++ ++KVFDG+ ++D+V+W ++++ +Q+G EA+ +F QM ++ V S+VL
Sbjct: 220 FLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQM-HTSGVYPTPYIFSSVL 278
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A + ++G+ +H V+K V +++ +Y + G A + FN M +++
Sbjct: 279 SACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEV 338
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
S+ ++I+G + +AL+LF KM ++P+ +T S+LSACS G + G +
Sbjct: 339 SYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQF---- 394
Query: 418 GHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
H + I+ G+ G ++DL + +K A++ + + + V+W +L A +
Sbjct: 395 -HSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETE-NVVLWNVMLVAYGLLD 452
Query: 474 NVD--LGEIAAKKLFELEPNNCGYHVLL 499
N++ ++ +EPN Y +L
Sbjct: 453 NLNESFKIFTQMQMEGIEPNQFTYPSIL 480
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/626 (39%), Positives = 375/626 (59%), Gaps = 33/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
NV WN ++ + + E+ R F M+ L P + T+P +++C+++ L G+Q H
Sbjct: 379 NVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIH 438
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Q GF +V+V S LIDMY+K G+L A + + + ++VSWT++++GY Q++
Sbjct: 439 TQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTED--DVVSWTALISGYAQHNL 496
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EAL FKE L + + D++ +S +SAC+ + H
Sbjct: 497 FAEALKHFKEML------------NRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYV 544
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G+ ++ +GN L+ YAR G + + F+ + KD+++WN +I+ +AQ+G +AL V
Sbjct: 545 SGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKV 604
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F QM ++ ++ + T + + A A++ ++ GK IH +IK + + V ++I Y
Sbjct: 605 FAQMNRA-KLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYA 663
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG ++ AR+ F +M EKN SW AMI GY H EA++LF KM + G PN++TFV
Sbjct: 664 KCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVG 723
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VLSACSH GLV +G + +M E + P HY C+VDL+ RAG L A IE M ++
Sbjct: 724 VLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIE 783
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
D +W +LL AC +HKNV++GE AA+ L ELEP + +VLLSN+YA +G+W+ ++TR
Sbjct: 784 PDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTR 843
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
+M+NR + K PG S +E++ VHAF VGD+ HP +KIYE+L ELN K E+GY D
Sbjct: 844 QMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRY 903
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
S+++DV+QE+K+ T+ IHSEKLA NLRVC DCH+ I+ +SK+
Sbjct: 904 SLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKIS 963
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
+R I+VRD+ RFH+F+ G+CSC DYW
Sbjct: 964 NRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 219/442 (49%), Gaps = 28/442 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH-DLHSGKQA 95
+V SW+ +I+ S L FS M + +++PT +F +++CS + +Q
Sbjct: 75 SVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQI 134
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H + G +S+ LI +Y+K G + ARK+FD + + + VSW +M++G+ QN
Sbjct: 135 HARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTK--DSVSWVAMISGFSQNG 192
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
EA+ LF E ++ +F +SVLS C+++ + V E H V
Sbjct: 193 YEEEAIHLFCEM------------HTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVF 240
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
K G E V N L+ Y+R + + KVF M KD V++NS+I+ AQ G + AL+
Sbjct: 241 KYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALE 300
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F +M K +K + VT++++L A A G L G+ +H VIK + +IV +++D+Y
Sbjct: 301 LFTKM-KRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLY 359
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
C + A + F + +NV W M+ +G E+ +F +M G+ PN T+
Sbjct: 360 VNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYP 419
Query: 396 SVLSACSHAGLVQEGWHWLNTM---GHEFNIEPGVEHYGC--MVDLLGRAGKLKEAYDLI 450
S+L C+ G + G + G +FN+ Y C ++D+ + GKL A+ ++
Sbjct: 420 SILRTCTSVGALDLGEQIHTQVIKTGFQFNV------YVCSVLIDMYAKHGKLDTAHVIL 473
Query: 451 EGMKVKADFVVWGSLLGACRIH 472
+ + D V W +L+ H
Sbjct: 474 RTL-TEDDVVSWTALISGYAQH 494
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 188/361 (52%), Gaps = 25/361 (6%)
Query: 16 VDKHSTNTNLTT--LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTR 73
+D ++ + L T + + + +++V SW ++I+ A+ EAL+ F M +
Sbjct: 457 IDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDN 516
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDE 133
F AI +C+ + L+ G+Q H Q+++ G+ D+ + +AL+ +Y++CG + +A F++
Sbjct: 517 IGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEK 576
Query: 134 IPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
I ++ +SW +++G+ Q+ +AL +F A N + S
Sbjct: 577 IDA--KDSISWNGLISGFAQSGYCEDALKVF------------AQMNRAKLEASFFTFGS 622
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+SA + + + H +IKRGFDS++ V N LI YA+ G ++ +R+ F M EK+
Sbjct: 623 AVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKN 682
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V+WN++I Y+Q+G EA+++F++M + ++ N VT VL A +H+G++ G
Sbjct: 683 DVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMP-NHVTFVGVLSACSHVGLVTKGLGYF 741
Query: 314 DQVIKMDLEESVIVGTS----IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGM 368
+ + K E ++ + ++D+ + G + ARK +M E + W +++ +
Sbjct: 742 ESMSK---EHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTV 798
Query: 369 H 369
H
Sbjct: 799 H 799
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 191/382 (50%), Gaps = 28/382 (7%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H + GF + + + L+D+Y G+L K+F+++P R++ SW +++G++
Sbjct: 30 KKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPN--RSVRSWDKIISGFM 87
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS--RVTVNGVTEGA 210
+ + L LF ++EE NV ++ ASVL ACS R+ + E
Sbjct: 88 EKKMSNRVLDLF-SCMIEE-----------NVSPTEISFASVLRACSGHRIGIR-YAEQI 134
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +I G + N LI YA+ G + +RKVFD + KD+V+W ++I+ ++QNG
Sbjct: 135 HARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYE 194
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA+ +F +M + + S+VL + + +G+ +H V K V +
Sbjct: 195 EEAIHLFCEM-HTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNA 253
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ +Y + A K F++M+ K+ S+ ++I+G + AL+LF KM + ++P+
Sbjct: 254 LVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPD 313
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEA 446
+T S+LSAC+ G + +G H + I+ G+ G ++DL +K A
Sbjct: 314 CVTVASLLSACASNGALCKGEQL-----HSYVIKAGISSDMIVEGALLDLYVNCSDIKTA 368
Query: 447 YDLIEGMKVKADFVVWGSLLGA 468
+++ + + + V+W +L A
Sbjct: 369 HEMFLTAQTE-NVVLWNVMLVA 389
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 272/660 (41%), Positives = 383/660 (58%), Gaps = 44/660 (6%)
Query: 9 VSSVVSNVDKHSTNTNLTTL-FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
+S ++ + S N L F+K +N F +N++I + A+ ++SM K
Sbjct: 39 LSIILRSTINFSNNAQYPILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKA 98
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
++ P TF +K+C+ L+ H G H F GF DVFV + ++ YSKCG L DA
Sbjct: 99 AIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDA 158
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
K+FD++ ++N+VSWT M+ G ++ REA+ LF+ L + D
Sbjct: 159 WKVFDDMV--VKNVVSWTGMICGCIEFGKFREAVDLFRGLL------------ESGLRPD 204
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKR-----GFDSEVGVGNTLIDAYARGGHVDVS 242
I VL AC+R+ G E G I R G V V +L+D Y + G ++ +
Sbjct: 205 GFVIVRVLRACARL---GDLES--GRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEA 259
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
R VFDGM+EKD V W+++I YA NGL EA+++F +M K +V+ + + L + A
Sbjct: 260 RFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRK-VNVRPDCYAMVGALSSCAS 318
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
LG L LG + + + ++GTS+ID Y KCG ++ A + MKEK+ + A+
Sbjct: 319 LGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAV 378
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
I+G M+ + A +F +M K G+ PN TFV +L C+HAGLV +G H+ N+M H+F+
Sbjct: 379 ISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFS 438
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
+ P +EHYGCMVDLL RAG L EA++LI+GM +KA+ +VWGSLLG CR+H+ L E
Sbjct: 439 VTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVL 498
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
K+L ELEP N G++VLLSNIY+ + RW++ E+ RS + + + K PG+S VE+ G VH F
Sbjct: 499 KQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEF 558
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
LVGD HP +KIYE LE L L+E GY V+ DV++EEKE L HSEKLA
Sbjct: 559 LVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAF 618
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH I+ ISKV REIV+RD+ RFH F DG CSC DYW
Sbjct: 619 ALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/639 (40%), Positives = 384/639 (60%), Gaps = 38/639 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F K ++N V +W +I L + G + EA+ F M P R T I +C+ +
Sbjct: 227 VFEKMPERNAV-TWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANME 285
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC---GELSDARKLFDEIPQRIRNIVSW 144
L G+Q H QA G D V LI+MY+KC G + ARK+FD+I N+ SW
Sbjct: 286 LLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH--NVFSW 343
Query: 145 TSMLTGYVQNDNA-REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
T+M+TGYVQ EAL LF+ +L +V + +S L AC+ +
Sbjct: 344 TAMITGYVQKGGYDEEALDLFRGMIL------------THVIPNHFTFSSTLKACANLAA 391
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ E +K GF S V N+LI YAR G +D +RK FD + EK+ +++N++I
Sbjct: 392 LRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDA 451
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YA+N + EAL++F++ ++ + +A T +++L A +G + G+ IH +VIK L+
Sbjct: 452 YAKNLNSEEALELFNE-IEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKL 510
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ V ++I MY +CG ++ A + F M+++NV SWT++I G+ H A +AL+LF+KM+
Sbjct: 511 NQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKML 570
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ GVRPN +T+++VLSACSH GLV EGW +M E + P +EHY C+VD+LGR+G L
Sbjct: 571 EEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSL 630
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
EA I M KAD +VW + LGACR+H N++LG+ AAK + E EP++ ++LLSN+Y
Sbjct: 631 SEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLY 690
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A+ +W++V R MK + L K G S VE+ KVH F VGD HP+ +IY+ L+ L+
Sbjct: 691 ASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLS 750
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
VK++++GYV ++ V+HDV++E+KE L HSEK+A NLR+CG
Sbjct: 751 VKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICG 810
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH+ I+ IS REI+VRD+ RFH+ KDG CSC +YW
Sbjct: 811 DCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 196/393 (49%), Gaps = 32/393 (8%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P T+ +K C G H++ D ++LI +YSKCG+ A +
Sbjct: 64 PDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSI 123
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F + R+++SW++M++ + N+ ALL F + + + + +
Sbjct: 124 F-RLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMI------------ENGYYPNEYC 170
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGF-DSEVGVGNTLIDAYARG-GHVDVSRKVFDG 248
A+ ACS V + GFVIK G+ S+V VG LID + +G G + + KVF+
Sbjct: 171 FAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEK 230
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M E++AVTW +I Q G A EA+D+F M+ S + + TLS V+ A A++ +L L
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFS-GYEPDRFTLSGVISACANMELLLL 289
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKC---GQVDLARKAFNQMKEKNVRSWTAMIAG 365
G+ +H Q I+ L VG +I+MY KC G + ARK F+Q+ + NV SWTAMI G
Sbjct: 290 GQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITG 349
Query: 366 YGMH-CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
Y EALDLF MI V PN+ TF S L AC++ ++ G ++
Sbjct: 350 YVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHA-----VK 404
Query: 425 PGVEHYGC----MVDLLGRAGKL---KEAYDLI 450
G C ++ + R+G++ ++A+D++
Sbjct: 405 LGFSSVNCVANSLISMYARSGRIDDARKAFDIL 437
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG +A+ + MV + T S L +G +H+++ + DL+ +
Sbjct: 44 NGRLHKAISTLEHMVHQGS-HPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSV 102
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQM-KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
S+I +Y KCGQ + A F M +++ SW+AM++ + + AL F MI+
Sbjct: 103 TLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN 162
Query: 386 GVRPNYITFVSVLSACSHAGLVQEG 410
G PN F + ACS A V G
Sbjct: 163 GYYPNEYCFAAATRACSTAEFVSVG 187
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/624 (41%), Positives = 365/624 (58%), Gaps = 39/624 (6%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SWN + +LA E++ + SM + +P +FP +KSC++L SG+Q H
Sbjct: 17 SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G + FV +ALI MY KCG + DARK+F+E P + V + ++++GY N +
Sbjct: 77 IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A +F+ V VDSV I ++ C+ + HG +K G
Sbjct: 137 AAFMFRRM------------KETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGT 184
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
SEV V N+ I Y + G V+ R++FD M K +TWN++I+ Y+QNGLA + L++F+Q
Sbjct: 185 YSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQ 244
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M KS+ V + TL +VL + AHLG ++G+ + + V +V + ++I MY +CG
Sbjct: 245 M-KSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCG 303
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+ AR F+ M K++ SWTAMI YGMH L LF MIK G+RP+ FV VLS
Sbjct: 304 NLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLS 363
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
ACSH+GL +G M E+ +EPG EHY C+VDLLGRAG+L EA + I+ M V+ D
Sbjct: 364 ACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDG 423
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
VWG+LLGAC+IHKNVD+ E+A K+ E EP N GY+VL+SNIY+++ E + R R +M
Sbjct: 424 AVWGALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMM 483
Query: 520 KNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVI 579
+ R K PG+S VE +GKVH FL GD+ H Q E+++ L+EL + E+ +M
Sbjct: 484 RERAFRKKPGYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVMELA--GNM---- 537
Query: 580 HDVDQ-EEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
D D+ EE T R HSE+LA NLRVC DCH I+L+SK+VDR
Sbjct: 538 -DCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDR 596
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
VVRD+ RFHYFKDG+CSC DYW
Sbjct: 597 RFVVRDASRFHYFKDGVCSCKDYW 620
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 121/240 (50%), Gaps = 23/240 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ K + +WN+VI+ ++ G + + L F M+ + P T + SC+ L
Sbjct: 210 LFDEMPVKG-LITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLG 268
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G++ + GF +VF+S+ALI MY++CG L+ AR +FD +P ++++VSWT+M
Sbjct: 269 AKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMP--VKSLVSWTAM 326
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y + L LF + + GA VFV VLSACS +G+T
Sbjct: 327 IGCYGMHGMGETGLTLFDDMIKRGIRPDGA------VFV------MVLSACSH---SGLT 371
Query: 208 E-GAHGF-VIKRGFDSEVGVG--NTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
+ G F +KR + E G + L+D R G +D + + D M +E D W +++
Sbjct: 372 DKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLG 431
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/626 (39%), Positives = 372/626 (59%), Gaps = 33/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SWN++IA + AL M+ P T A+K+C+A+ G+Q H
Sbjct: 248 DVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLH 307
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
H D+F + L+DMYSKC + DAR+ +D +P++ +I++W ++++GY Q +
Sbjct: 308 SSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKK--DIIAWNALISGYSQCGD 365
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+A+ LF + S+++ + +++VL + + + V + H IK
Sbjct: 366 HLDAVSLFSKMF------------SEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIK 413
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G S+ V N+L+D Y + H+D + K+F+ +D V + S+I Y+Q G EAL +
Sbjct: 414 SGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKL 473
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
+ QM + D+K + S++L A A+L GK +H IK + S+++MY
Sbjct: 474 YLQM-QDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYA 532
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG ++ A +AF+++ + + SW+AMI GY H +EAL LF +M++ GV PN+IT VS
Sbjct: 533 KCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVS 592
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VL AC+HAGLV EG + M F I+P EHY CM+DLLGR+GKL EA +L+ + +
Sbjct: 593 VLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFE 652
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
AD VWG+LLGA RIHKN++LG+ AAK LF+LEP G HVLL+NIYA+AG WE+V + R
Sbjct: 653 ADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVR 712
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
MK+ ++ K PG S +E++ KV+ F+VGD+ H + ++IY L++L L + GY + +
Sbjct: 713 KFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVE 772
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
IH+VD+ EKE L HSEKLA NLR+C DCHT + + K+V
Sbjct: 773 IDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIV 832
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
REI+VRD RFH+FKDG CSCGDYW
Sbjct: 833 SREIIVRDINRFHHFKDGSCSCGDYW 858
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 162/554 (29%), Positives = 265/554 (47%), Gaps = 71/554 (12%)
Query: 20 STNTNLTTLFNK---------YVDKN---NVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S +L TL++K VD++ +V SW+S+++ + G EAL F+ M L
Sbjct: 17 SLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLL 76
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
+ TFP +K+CS DL+ G++ H A + GF D FV++ L+ MY+KCG L D+
Sbjct: 77 GVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDS 136
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R+LF I + RN+VSW ++ + YVQ++ EA+ LFKE + + +
Sbjct: 137 RRLFGGIVE--RNVVSWNALFSCYVQSELCGEAVGLFKEMV------------RSGIMPN 182
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
+I+ +L+AC+ + + HG ++K G D + N L+D Y++ G ++ + VF
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQ 242
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ D V+WN+IIA + AL + D+M K + + N TLS+ L A A +G
Sbjct: 243 DIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEM-KGSGTRPNMFTLSSALKACAAMGFKE 301
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
LG+ +H +IKMD + ++DMY KC +D AR+A++ M +K++ +W A+I+GY
Sbjct: 302 LGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYS 361
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGWH---- 412
+A+ LF KM + N T +VL + + H ++ G +
Sbjct: 362 QCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFY 421
Query: 413 ----WLNTMGHEFNIEPGVE-----------HYGCMVDLLGRAGKLKEAYDLIEGMK--- 454
L+T G +I+ + Y M+ + G +EA L M+
Sbjct: 422 VINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDAD 481
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV------LLSNIYANAGR 508
+K D + SLL AC +L K + G+ L N+YA G
Sbjct: 482 IKPDPFICSSLLNAC-----ANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGS 536
Query: 509 WEDVERTRSLMKNR 522
ED +R S + NR
Sbjct: 537 IEDADRAFSEIPNR 550
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 196/375 (52%), Gaps = 21/375 (5%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
+ H FGF RD + + L+ +YSKC ARKL DE + ++VSW+S+L+GYVQ
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSE--LDVVSWSSLLSGYVQ 59
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N EALL+F E L +C + SVL ACS + HG
Sbjct: 60 NGFVEEALLVFNEMCLLGVKC------------NEFTFPSVLKACSMKRDLNMGRKVHGM 107
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+ GF+S+ V NTL+ YA+ G +D SR++F G++E++ V+WN++ + Y Q+ L EA
Sbjct: 108 AVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEA 167
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+ +F +MV+S + N ++S +L A A L LG+ IH ++KM L+ +++D
Sbjct: 168 VGLFKEMVRSG-IMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVD 226
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY K G+++ A F + +V SW A+IAG +H AL L +M +G RPN T
Sbjct: 227 MYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFT 286
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC--MVDLLGRAGKLKEAYDLIE 451
S L AC+ G + G +++ ++ + + +VD+ + + +A +
Sbjct: 287 LSSALKACAAMGFKELGRQLHSSL---IKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYD 343
Query: 452 GMKVKADFVVWGSLL 466
M K D + W +L+
Sbjct: 344 SMP-KKDIIAWNALI 357
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 141/270 (52%), Gaps = 7/270 (2%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +IK GF + + N L+ Y++ +RK+ D E D V+W+S+++ Y QNG
Sbjct: 4 HAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFV 63
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EAL VF++M VKCN T +VL A + L +G+ +H + E V +
Sbjct: 64 EEALLVFNEMCL-LGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ MY KCG +D +R+ F + E+NV SW A+ + Y EA+ LF +M+++G+ PN
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPN 182
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG--CMVDLLGRAGKLKEAYD 448
+ +L+AC AGL QEG G + ++ + +VD+ +AG+++ A
Sbjct: 183 EFSISIILNAC--AGL-QEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVA 239
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
+ + + D V W +++ C +H DL
Sbjct: 240 VFQDI-AHPDVVSWNAIIAGCVLHDCNDLA 268
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + SW+++I A+ G EALR F+ M + + P T + +C+ ++ G
Sbjct: 547 IPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEG 606
Query: 93 KQAHQQA-FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
KQ ++ +FG + +ID+ + G+L++A +L + IP V W ++L
Sbjct: 607 KQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFV-WGALL 662
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 260/624 (41%), Positives = 365/624 (58%), Gaps = 39/624 (6%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
WN + +LA E++ + SM + +P +FP +KSC++L SG+Q H
Sbjct: 20 PWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G + FV +ALI MY KCG ++DARK+F+E PQ + V + ++++GY N +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A +F+ V VDSV + ++ C+ + HG +K G
Sbjct: 140 AAYMFRRM------------KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGL 187
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
DSEV V N+ I Y + G V+ R++FD M K +TWN++I+ Y+QNGLA + L++++Q
Sbjct: 188 DSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQ 247
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M KS+ V + TL +VL + AHLG ++G + V +V V + I MY +CG
Sbjct: 248 M-KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCG 306
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+ AR F+ M K++ SWTAMI YGMH L LF MIK G+RP+ FV VLS
Sbjct: 307 NLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLS 366
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
ACSH+GL +G M E+ +EPG EHY C+VDLLGRAG+L EA + IE M V+ D
Sbjct: 367 ACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDG 426
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
VWG+LLGAC+IHKNVD+ E+A K+ E EPNN GY+VL+SNIY+++ E + R R +M
Sbjct: 427 AVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMM 486
Query: 520 KNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVI 579
+ R K PG+S VE +G+VH FL GD+ H Q E+++ L+EL + E+ +M
Sbjct: 487 RERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELA--GNM---- 540
Query: 580 HDVDQ-EEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
D D+ EE T R HSE+LA NLRVC DCH ++ +SK+VDR
Sbjct: 541 -DCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDR 599
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
+ VVRD+ RFHYFKDG+CSC DYW
Sbjct: 600 QFVVRDASRFHYFKDGVCSCKDYW 623
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 120/240 (50%), Gaps = 23/240 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ K + +WN+VI+ ++ G + + L + M+ + P T + SC+ L
Sbjct: 213 LFDEMPVKG-LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G + + GF +VFVS+A I MY++CG L+ AR +FD +P ++++VSWT+M
Sbjct: 272 AKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP--VKSLVSWTAM 329
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y + L+LF + + GA VFV VLSACS +G+T
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGA------VFV------MVLSACSH---SGLT 374
Query: 208 E-GAHGF-VIKRGFDSEVGVG--NTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
+ G F +KR + E G + L+D R G +D + + + M +E D W +++
Sbjct: 375 DKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLG 434
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/640 (41%), Positives = 385/640 (60%), Gaps = 42/640 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-----LTPTRSTFPCAIKS 82
LF+K DK N+ SWNS+I AR D R F ++K+ + T +
Sbjct: 261 LFDKN-DKKNIVSWNSMIGGYAREED---VCRTFYLLQKMQTEDAKMKADEFTILNVLPV 316
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
C +L S K+ H ++ G + V++A I Y++CG L + ++FD + + +
Sbjct: 317 CLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTK--TVS 374
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
SW ++L GY QN + R+AL L+ L+ ++ G + D I S+L ACSR+
Sbjct: 375 SWNALLCGYAQNSDPRKALDLY----LQMTDSG--------LDPDWFTIGSLLLACSRMK 422
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
E HGF ++ G + +G +L+ Y G ++ +FDGM + V+WN +IA
Sbjct: 423 SLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIA 482
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
Y+QNGL EA+++F QM+ S ++ + + V A + L LRLGK +H +K L
Sbjct: 483 GYSQNGLPDEAINLFRQML-SDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLT 541
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
E + V +SIIDMY K G + L+++ F++++EK+V SW +IAGYG+H R +EAL+LF KM
Sbjct: 542 EDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKM 601
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
++ G++P+ TF +L ACSHAGLV++G + N M + NIEP +EHY C+VD+LGRAG+
Sbjct: 602 LRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGR 661
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
+ +A LIE M D +W SLL +CRIH N+ LGE A KL ELEP +VL+SN+
Sbjct: 662 IDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNL 721
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
+A +G+W+DV R R MK+ L K G S +E+ GKVH FL+GD+ P+ E++ E L
Sbjct: 722 FAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRL 781
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVC 604
VK+ +GY D SV+HD+++E+K LR HSEKLA NLR+C
Sbjct: 782 EVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRIC 841
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
GDCH + ISKVV+R+IVVRD+KRFH+F+DG+CSCGDYW
Sbjct: 842 GDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 223/445 (50%), Gaps = 19/445 (4%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR--KLSLTPTRSTFPCAIKSCSALHD 88
+++ + N+ SWNS+I + G E+ AF M + S P +T + C+ D
Sbjct: 160 EHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEED 219
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
+ G H A G + ++ V+++LIDMYSKC LS+A+ LFD+ + +NIVSW SM+
Sbjct: 220 IEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDK--KNIVSWNSMI 277
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC-SRVTVNGVT 207
GY + ++ L ++ E+++ + D I +VL C R + +
Sbjct: 278 GGYAREEDVCRTFYLLQKMQTEDAK----------MKADEFTILNVLPVCLERSELQSLK 327
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
E HG+ + G S V N I AY R G + S +VFD M K +WN+++ YAQN
Sbjct: 328 E-LHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQN 386
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+ALD++ QM S + + T+ ++LLA + + L G+ IH ++ L +
Sbjct: 387 SDPRKALDLYLQMTDSG-LDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFI 445
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G S++ +Y CG+ A+ F+ M+ +++ SW MIAGY + EA++LF +M+ G+
Sbjct: 446 GISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGI 505
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+P I + V ACS ++ G L+ + ++ + ++D+ + G + +
Sbjct: 506 QPYEIAIMCVCGACSQLSALRLGKE-LHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQ 564
Query: 448 DLIEGMKVKADFVVWGSLLGACRIH 472
+ + ++ K D W ++ IH
Sbjct: 565 RIFDRLREK-DVASWNVIIAGYGIH 588
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 199/380 (52%), Gaps = 21/380 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT---PTRSTFPCAIKSCS 84
+F+K + + N+F WN++++ R +A+ FS + +S+T P T PC IK+C+
Sbjct: 56 VFDK-LRRKNLFQWNAIVSAYTRNELFEDAMSIFSEL--ISVTEHKPDNFTLPCVIKACA 112
Query: 85 ALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
L DL G+ H A DVFV +ALI MY KCG + +A K+F+ +P+ RN+VSW
Sbjct: 113 GLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPE--RNLVSW 170
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA-IASVLSACSRVTV 203
S++ G+ +N +E+ F+E L+ E FV VA + +VL C+
Sbjct: 171 NSIICGFSENGFLQESFNAFREMLVGEES-----------FVPDVATLVTVLPVCAGEED 219
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
HG +K G + E+ V N+LID Y++ + ++ +FD +K+ V+WNS+I
Sbjct: 220 IEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGG 279
Query: 264 YAQNGLAAEALDVFDQM-VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
YA+ + +M + +K + T+ VL L+ K +H + L+
Sbjct: 280 YAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQ 339
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ +V + I Y +CG + + + F+ M K V SW A++ GY + R+ALDL+ +M
Sbjct: 340 SNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQM 399
Query: 383 IKAGVRPNYITFVSVLSACS 402
+G+ P++ T S+L ACS
Sbjct: 400 TDSGLDPDWFTIGSLLLACS 419
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 176/346 (50%), Gaps = 28/346 (8%)
Query: 80 IKSCSALHDLHSGKQAHQQ-AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
+++C D+ G++ H+ + F D +++ +I MYS CG SD+R +FD++ R
Sbjct: 5 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL--RR 62
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
+N+ W ++++ Y +N+ +A+ +F E + +E+ D+ + V+ AC
Sbjct: 63 KNLFQWNAIVSAYTRNELFEDAMSIFSELI-------SVTEHKP----DNFTLPCVIKAC 111
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ + G+ + HG K S+V VGN LI Y + G V+ + KVF+ M E++ V+WN
Sbjct: 112 AGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWN 171
Query: 259 SIIAIYAQNGLAAEALDVFDQM-VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
SII +++NG E+ + F +M V + TL VL A + G +H +
Sbjct: 172 SIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAV 231
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
K+ L E ++V S+IDMY KC + A+ F++ +KN+ SW +MI GY R +
Sbjct: 232 KLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYA---REEDVCR 288
Query: 378 LFYKMIK-----AGVRPNYITFVSVLSACSHAGLVQE-----GWHW 413
FY + K A ++ + T ++VL C +Q G+ W
Sbjct: 289 TFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSW 334
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 131/252 (51%), Gaps = 4/252 (1%)
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
F ++ + +I Y+ G SR VFD + K+ WN+I++ Y +N L +A+ +F
Sbjct: 30 FCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFS 89
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
+++ T+ K + TL V+ A A L L LG+ IH KMDL V VG ++I MY KC
Sbjct: 90 ELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKC 149
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI--KAGVRPNYITFVS 396
G V+ A K F M E+N+ SW ++I G+ + +E+ + F +M+ + P+ T V+
Sbjct: 150 GLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVT 209
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VL C+ +++G ++ + + + + ++D+ + L EA L + K
Sbjct: 210 VLPVCAGEEDIEKGMA-VHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKND-K 267
Query: 457 ADFVVWGSLLGA 468
+ V W S++G
Sbjct: 268 KNIVSWNSMIGG 279
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/664 (39%), Positives = 387/664 (58%), Gaps = 68/664 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N WN+++ A D V AL+ + M L L P TFP +KSC+ G
Sbjct: 26 IQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEG 85
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK----------------------- 129
+Q H G+ D++V ++LI MY++ G L DA K
Sbjct: 86 QQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASS 145
Query: 130 --------LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
+FDEIP ++++VSW +M++GY + + +EAL LFKE +
Sbjct: 146 GNIRSAQEMFDEIP--VKDVVSWNAMISGYAETGSYKEALELFKEMM------------K 191
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
NV D + +VLSAC++ + H ++ GF S + + N LID Y++ G V+
Sbjct: 192 TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVET 251
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ +F+G+ KD V+WN++I Y L EAL +F +M++S + N VT+ ++L A A
Sbjct: 252 ACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESP-NDVTIVSILPACA 310
Query: 302 HLGVLRLGKCIH---DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
HLG + +G+ IH D+ +K D+ + + TS+IDMY KCG ++ A + FN M K++ S
Sbjct: 311 HLGAIDIGRWIHVYIDKKLK-DVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSS 369
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
W AMI G+ MH RA DLF +M K G+ P+ ITFV +LSACSH+G + G H +M
Sbjct: 370 WNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMT 429
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
+++I P +EHYGCM+DLLG +G KEA ++I+ M ++ D V+W SLL ACR H N++L
Sbjct: 430 QDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELA 489
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
E A+ L ++EP N G +VLLSNIYA AG W++V + R+L+ + + K PG S +E+ +
Sbjct: 490 ESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSE 549
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
VH F+VGDK HP++ +IY LEE+ L+E G+V D + V+ ++++E KE LR HSEKL
Sbjct: 550 VHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKL 609
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVC +CH +L+SK+ REI+ RD RFH+F+DG+CSC
Sbjct: 610 AIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSC 669
Query: 641 GDYW 644
D+W
Sbjct: 670 NDFW 673
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
A F ++E N W M+ GY + AL L+ MI G+ PN TF +L +C+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 404 AGLVQEGWHWLNTMGH--EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+ +EG GH + EP + + ++ + + G+L++A+ + + + D V
Sbjct: 79 SKAFEEGQQ---IHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHR-DVVS 134
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFELEP--NNCGYHVLLSNIYANAGRW-EDVERTRSL 518
+ +L+ N+ +A+++F+ P + ++ ++S YA G + E +E + +
Sbjct: 135 YTALITGYASSGNIR----SAQEMFDEIPVKDVVSWNAMISG-YAETGSYKEALELFKEM 189
Query: 519 MKN 521
MK
Sbjct: 190 MKT 192
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/648 (37%), Positives = 383/648 (59%), Gaps = 38/648 (5%)
Query: 20 STNTNLTTLFN-----KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS 74
S TNL L K ++ V +W SVI AL +F MR P +
Sbjct: 47 SIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHN 106
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
FP +KSC+ + DL G+ H G D++ +AL++MYSK + RK+F+ +
Sbjct: 107 VFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELM 166
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
P++ ++VS+ +++ GY Q+ +AL + +E + ++ D+ ++SV
Sbjct: 167 PRK--DVVSYNTVIAGYAQSGMYEDALRMVREM------------GTSDLKPDAFTLSSV 212
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
L S + HG+VI++G DS+V +G++L+D YA+ ++ S +VF + +D+
Sbjct: 213 LPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDS 272
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
++WNS++A Y QNG EAL +F QMV S V+ AV S+V+ A AHL L LGK +H
Sbjct: 273 ISWNSLVAGYVQNGRYNEALRLFRQMV-SAKVRPGAVAFSSVIPACAHLATLHLGKQLHG 331
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
V++ ++ + ++++DMY KCG + ARK F++M + SWTA+I G+ +H E
Sbjct: 332 YVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHE 391
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
A+ LF +M + GV+PN + FV+VL+ACSH GLV E W + N+M + + +EHY +
Sbjct: 392 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA 451
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCG 494
DLLGRAGKL+EAYD I M+V+ VW +LL +C +HKN++L E A+K+F ++ N G
Sbjct: 452 DLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMG 511
Query: 495 YHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEK 554
+VL+ N+YA+ GRW+++ + R ++ + L K P S +E++ K H F+ GD+ HP ++
Sbjct: 512 AYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDR 571
Query: 555 IYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------------- 599
I E+L+ + ++++ GYV D + V+HDVD+E K L HSE+LA
Sbjct: 572 INEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIR 631
Query: 600 ---NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
N+R+C DCH I+ ISK+ +REI+VRD+ RFH+F G CSCGDYW
Sbjct: 632 VTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/652 (39%), Positives = 378/652 (57%), Gaps = 45/652 (6%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K NV SW ++IA + G EAL F M + P T A+ +C+ L L G++
Sbjct: 324 KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGRE 383
Query: 95 AHQQAF-IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H + D+ V ++L+D Y+KC + AR+ F I Q ++VSW +ML GY
Sbjct: 384 IHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQT--DLVSWNAMLAGYAL 441
Query: 154 NDNAREALLLFKEFLLEESE---------CGGASENSDN--------------VFVDSVA 190
+ EA+ L E + E G ++ D + ++
Sbjct: 442 RGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTT 501
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
I+ L+AC +V + + HG+V++ + GVG+ LI Y+ ++V+ VF +
Sbjct: 502 ISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS 561
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+D V WNSII+ AQ+G + ALD+ +M ++V+ N VT+ + L A + L LR GK
Sbjct: 562 TRDVVVWNSIISACAQSGRSVNALDLLREM-NLSNVEVNTVTMVSALPACSKLAALRQGK 620
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
IH +I+ L+ + S+IDMY +CG + +R+ F+ M ++++ SW MI+ YGMH
Sbjct: 621 EIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHG 680
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
+A++LF + G++PN+ITF ++LSACSH+GL++EGW + M E+ ++P VE Y
Sbjct: 681 FGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQY 740
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
CMVDLL RAG+ E + IE M + + VWGSLLGACRIH N DL E AA+ LFELEP
Sbjct: 741 ACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEP 800
Query: 491 NNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHP 550
+ G +VL++NIY+ AGRWED + R LMK R + K PG S +E++ K+H+F+VGD HP
Sbjct: 801 QSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHP 860
Query: 551 QHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------- 599
E+I +E L ++E+GYV D V+ DVD++EKE +L HSEK+A
Sbjct: 861 LMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAG 920
Query: 600 -------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH+ + ISKV R+I++RD+ RFH+F DG+CSCGDYW
Sbjct: 921 TPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 151/575 (26%), Positives = 259/575 (45%), Gaps = 113/575 (19%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++N VFSW +++ GD E ++ F M + P FP K+CS L
Sbjct: 146 MFDKMSERN-VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK 204
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR---IRNI--- 141
+ GK + GF + V +++DM+ KCG + AR+ F+EI + + NI
Sbjct: 205 NYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVS 264
Query: 142 ---------------------------VSWTSMLTGYVQNDNAREALLLFKEF------- 167
V+W ++++GY Q+ EA F E
Sbjct: 265 GYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFK 324
Query: 168 --------LLEESECGGASENSDNVF---------VDSVAIASVLSACSRVTVNGVTEGA 210
L+ SE G + +VF +S+ IAS +SAC+ +++
Sbjct: 325 PNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 384
Query: 211 HGFVIK-RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG+ IK DS++ VGN+L+D YA+ V+V+R+ F + + D V+WN+++A YA G
Sbjct: 385 HGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGS 444
Query: 270 AAEALDVFDQM----------------------------------VKSTDVKCNAVTLSA 295
EA+++ +M + S + N T+S
Sbjct: 445 HEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISG 504
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
L A + L+LGK IH V++ +E S VG+++I MY C +++A F+++ ++
Sbjct: 505 ALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRD 564
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
V W ++I+ R+ ALDL +M + V N +T VS L ACS +++G
Sbjct: 565 VVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEI-- 622
Query: 416 TMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
H+F I G++ ++D+ GR G ++++ + + M + D V W ++ +
Sbjct: 623 ---HQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR-DLVSWNVMISVYGM 678
Query: 472 HKNVDLGEIAAKKLFE------LEPNNCGYHVLLS 500
H G + A LF+ L+PN+ + LLS
Sbjct: 679 H---GFG-MDAVNLFQQFRTMGLKPNHITFTNLLS 709
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 216/497 (43%), Gaps = 89/497 (17%)
Query: 20 STNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCA 79
STNT L K + + S + R G A SSM + +
Sbjct: 37 STNTKSQNL-RKLTNARQRITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASI 95
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++ C L++L G Q H Q + G F+ S L+++Y + G + DAR++FD++ + R
Sbjct: 96 LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE--R 153
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+ SWT+++ Y + E + LF + ++ V D V ACS
Sbjct: 154 NVFSWTAIMEMYCGLGDYEETIKLFYLMV------------NEGVRPDHFVFPKVFKACS 201
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM---------- 249
+ V + + +++ GF+ V +++D + + G +D++R+ F+ +
Sbjct: 202 ELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNI 261
Query: 250 -------------------------IEKDAVTWNSIIAIYAQ------------------ 266
++ D VTWN+II+ YAQ
Sbjct: 262 MVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLK 321
Query: 267 ------------------NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
NG EAL VF +MV VK N++T+++ + A +L +LR
Sbjct: 322 DFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE-GVKPNSITIASAVSACTNLSLLRH 380
Query: 309 GKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
G+ IH IK+ +L+ ++VG S++D Y KC V++AR+ F +K+ ++ SW AM+AGY
Sbjct: 381 GREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYA 440
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+ EA++L +M G+ P+ IT+ +++ + G + + M H ++P
Sbjct: 441 LRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM-HSMGMDPNT 499
Query: 428 EHYGCMVDLLGRAGKLK 444
+ G+ LK
Sbjct: 500 TTISGALAACGQVRNLK 516
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 148/288 (51%), Gaps = 18/288 (6%)
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
AS+L C ++ + H ++ G D +G+ L++ Y + G V+ +R++FD M E
Sbjct: 93 ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
++ +W +I+ +Y G E + +F MV + V+ + V A + L R+GK
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMV-NEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
++D ++ + E + V SI+DM+ KCG++D+AR+ F +++ K+V W M++GY
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
++AL M +GV+P+ +T+ +++S + +G +E + MG + +P V +
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWT 331
Query: 432 CMVDLLGRAGKLKEAYD----------LIEGMKVKADFVVWGSLLGAC 469
++ AG + YD ++EG VK + + S + AC
Sbjct: 332 ALI-----AGSEQNGYDFEALSVFRKMVLEG--VKPNSITIASAVSAC 372
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 266/663 (40%), Positives = 384/663 (57%), Gaps = 62/663 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K +++ V +W +I A G + E+L F MR+ + P + + +C+ L
Sbjct: 215 LFDKMQERDLV-TWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLG 273
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+H + F DV + +A+IDMY+KCG + AR++FD + ++ N++SW++M
Sbjct: 274 AMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEK--NVISWSAM 331
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y + R+AL LF+ L S + D + +AS+L AC
Sbjct: 332 IAAYGYHGQGRKALDLFRMML------------SSGMLPDKITLASLLYACINCRNLTQV 379
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ- 266
H G + V N L+ Y+ +D + +FDGM +D+V+W+ ++ +A+
Sbjct: 380 RQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 439
Query: 267 ---------------------------NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
G A E+L +FD+M + V + V + V+ A
Sbjct: 440 GDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKM-REEGVVPDKVAMVTVVFA 498
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A LG + + I D + + + VI+GT++IDM+ KCG V+ AR+ F++M+EKNV SW
Sbjct: 499 CAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISW 558
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
+AMIA YG H + R+ALDLF M+++G+ PN IT VS+L ACSHAGLV+EG + + M
Sbjct: 559 SAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWE 618
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
++++ V+HY C+VDLLGRAG+L EA LIE M V+ D +WG+ LGACR HK+V L E
Sbjct: 619 DYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAE 678
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
AA L EL+P N G+++LLSNIYANAGRWEDV +TR LM RRL K PG++ +E+ K
Sbjct: 679 KAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKS 738
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
H F VGD HP+ ++IYE L+ L KL+ VGYV D V+HDVD+E K L HSEKLA
Sbjct: 739 HQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLA 798
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLRVCGDCHT +L+S + R I+VRD+ RFH+FK+G CSCG
Sbjct: 799 IAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCG 858
Query: 642 DYW 644
DYW
Sbjct: 859 DYW 861
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/529 (25%), Positives = 254/529 (48%), Gaps = 84/529 (15%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +++V SW+ ++ A+ GD + F + + P T P I++C L
Sbjct: 135 LFDGMCVRDSV-SWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLK 193
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L AL+DMY KC E+ DAR LFD++ +R ++V+WT M
Sbjct: 194 NLQM---------------------ALVDMYVKCREIEDARFLFDKMQER--DLVTWTVM 230
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + A E+L+LF++ + V D VA+ +V+ AC+++
Sbjct: 231 IGGYAECGKANESLVLFEKM------------REEGVVPDKVAMVTVVFACAKLGAMHKA 278
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
++ ++ F +V +G +ID YA+ G V+ +R++FD M EK+ ++W+++IA Y +
Sbjct: 279 RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH 338
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G +ALD+F +M+ S+ + + +TL+++L A + L + +H Q + +++IV
Sbjct: 339 GQGRKALDLF-RMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIV 397
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG-----MHC------------ 370
++ Y +D A F+ M ++ SW+ M+ G+ M+C
Sbjct: 398 ANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGA 457
Query: 371 -----------RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW---HWLNT 416
A E+L LF KM + GV P+ + V+V+ AC+ G + + ++
Sbjct: 458 RPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQR 517
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH---- 472
+ ++ G M+D+ + G ++ A ++ + M+ K + + W +++ A H
Sbjct: 518 KKFQLDVILGTA----MIDMHAKCGCVESAREIFDRMEEK-NVISWSAMIAAYGYHGQGR 572
Query: 473 KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA--NAGRWEDVERTRSLM 519
K +DL + + + PN L+S +YA +AG E+ R SLM
Sbjct: 573 KALDLFPMMLRS--GILPNKI---TLVSLLYACSHAGLVEEGLRFFSLM 616
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 192/384 (50%), Gaps = 44/384 (11%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L +Q H QA + G ++ V++ LI YS L DA LFD + +R+ VSW+ M
Sbjct: 93 NLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC--VRDSVSWSVM 150
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + + F+E + CG +N FV + AC +
Sbjct: 151 VGGFAKVGDYINCFGTFRELI----RCGARPDNYTLPFV--------IRACRDLK----- 193
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ L+D Y + ++ +R +FD M E+D VTW +I YA+
Sbjct: 194 ----------------NLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAEC 237
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A E+L +F++M + V + V + V+ A A LG + + I D + + + VI+
Sbjct: 238 GKANESLVLFEKM-REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVIL 296
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
GT++IDMY KCG V+ AR+ F++M+EKNV SW+AMIA YG H + R+ALDLF M+ +G+
Sbjct: 297 GTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGM 356
Query: 388 RPNYITFVSVLSA---CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
P+ IT S+L A C + V++ + G N+ + +V L
Sbjct: 357 LPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANK----LVHFYSYYRALD 412
Query: 445 EAYDLIEGMKVKADFVVWGSLLGA 468
+AY L +GM V+ D V W ++G
Sbjct: 413 DAYGLFDGMCVR-DSVSWSVMVGG 435
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 128/258 (49%), Gaps = 30/258 (11%)
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
G + V N LI Y+ +D + +FDGM +D+V+W+ ++ +A+ G F
Sbjct: 108 GMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTF 167
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
++++ + + TL V+ A L L++ +++DMY K
Sbjct: 168 RELIR-CGARPDNYTLPFVIRACRDLKNLQM---------------------ALVDMYVK 205
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
C +++ AR F++M+E+++ +WT MI GY +A E+L LF KM + GV P+ + V+V
Sbjct: 206 CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 265
Query: 398 LSACSHAGLVQEGW---HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
+ AC+ G + + ++ + ++ G M+D+ + G ++ A ++ + M+
Sbjct: 266 VFACAKLGAMHKARIIDDYIQRKKFQLDVILGTA----MIDMYAKCGCVESAREIFDRME 321
Query: 455 VKADFVVWGSLLGACRIH 472
K + + W +++ A H
Sbjct: 322 EK-NVISWSAMIAAYGYH 338
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/635 (39%), Positives = 382/635 (60%), Gaps = 37/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ + F+ NS+I +A+ + M L P R TFP KSC L
Sbjct: 96 VFNQ-IPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLC 154
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ GKQ H + GF D ++ + L++MYS CG L ARK+FD++ + ++VSW +M
Sbjct: 155 E---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNK--SVVSWATM 209
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y Q D EA+ LF+ + +V + + + +VL+AC+R
Sbjct: 210 IGAYAQWDLPHEAIKLFRRMEIA------------SVKPNEITLVNVLTACARSRDLETA 257
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H ++ + G + + L+D Y + G ++R +F+ M EK+ WN +I + ++
Sbjct: 258 KQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVED 317
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
EAL +F++M + + VK + VT++++L+A HLG L LGK +H + K +E V +
Sbjct: 318 SDYEEALSLFNEM-QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVAL 376
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
GT+++DMY KCG ++ A + F +M EK+V +WTA+I G M + +AL+LF++M + V
Sbjct: 377 GTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEV 436
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+P+ ITFV VL+ACSHAGLV EG + N+M +++ I+P +EHYGCMVD+LGRAG++ EA
Sbjct: 437 KPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAE 496
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
DLI+ M + D+ V LL ACRIH N+ + E AA++L EL+P N G +VLLSNIY++
Sbjct: 497 DLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMK 556
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
WE ++ R LM R + K PG S +E+ G VH F+ GD HPQ +IYE L+++ +L+
Sbjct: 557 NWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLK 616
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV D + V+ D+D++EKE L +HSEKLA NLRVC DCH+
Sbjct: 617 SAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHS 676
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
++ IS+V +REI+VRD RFH+F G CSC D+W
Sbjct: 677 AMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 13/227 (5%)
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G + +R VF+ + T NSII Y L +A+ +F Q++ + + T ++
Sbjct: 88 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAI-LFYQLMMLQGLDPDRFTFPSL 146
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
+ GVL GK +H K+ + ++++MY CG + ARK F++M K+V
Sbjct: 147 FKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSV 203
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW MI Y EA+ LF +M A V+PN IT V+VL+AC+ + ++
Sbjct: 204 VSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETA-----K 258
Query: 417 MGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
H++ E G+ + ++D+ + G A DL M K F
Sbjct: 259 QVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLF 305
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 21/238 (8%)
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK---CGQVDLARKA 347
+ L LL++ + K IH Q+++ L + I+ +C G + AR
Sbjct: 38 IQLHPCLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIV-AFCALHDSGSLPYARLV 96
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
FNQ+ + ++I GY R+A+ + M+ G+ P+ TF S+ +C G++
Sbjct: 97 FNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVL 153
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
EG L+ + ++++ G L A + + M V V W +++G
Sbjct: 154 CEGKQ-LHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKM-VNKSVVSWATMIG 211
Query: 468 ACRIHKNVDLGEIAAKKLFELE-----PNNCGYHVLLSNIYANAGRWEDVERTRSLMK 520
A + DL A K +E PN + L N+ R D+E + + K
Sbjct: 212 A---YAQWDLPHEAIKLFRRMEIASVKPNE----ITLVNVLTACARSRDLETAKQVHK 262
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/612 (41%), Positives = 367/612 (59%), Gaps = 42/612 (6%)
Query: 56 EALRAFSSM-----RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFV 110
+++R F M + LT + P + + L +L G Q A GF+ V +
Sbjct: 13 DSIRVFGDMVLGNGPRFDLTTVIAVLP----AVAELQELKLGMQILCLAIKCGFYSHVSL 68
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+ LI ++SKCGE+ AR LF EI R ++++S +M++G+ N +++ LFKE L
Sbjct: 69 LTGLISLFSKCGEVEIARLLFGEI--RKKDLISCNAMISGFTCNGETEDSVRLFKELL-- 124
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI 230
S V S I ++ S + + HGF +K G S V L
Sbjct: 125 ----------SSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALT 174
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
Y R + +R++FD EK +WN++I+ QNGL A+ +F M K+ +V N
Sbjct: 175 TVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKN-NVNPNP 233
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
VT++++L A A +G L LG+ +H + E +V V T++IDMY KCG + +AR+ F+
Sbjct: 234 VTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDL 293
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
M EKN +W AMI+GYG+H +EAL LFY M+ + V+P +TF+SVL ACSHAGLV+EG
Sbjct: 294 MPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEG 353
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
+TM H+F EP EHY CMVD+LGRAG+LK+A + I+ M V+ VWG+LLGAC
Sbjct: 354 DGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACM 413
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
IHK+ +L +A++KLFEL+P N GY+VL+SNIY+ ++ R + K +RLAKTPG
Sbjct: 414 IHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGC 473
Query: 531 SLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMT 590
+L+E+ H F GD+ HPQ + IY L++L K+ E G+ T+ T+V+HD+++EEKE+T
Sbjct: 474 TLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELT 533
Query: 591 LRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHY 632
+++HSEKLA NLRVC DCH + +SK+ R IVVRD+ RFH+
Sbjct: 534 MKVHSEKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHH 593
Query: 633 FKDGLCSCGDYW 644
FKDGLCSCGDYW
Sbjct: 594 FKDGLCSCGDYW 605
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 127/263 (48%), Gaps = 32/263 (12%)
Query: 16 VDKHSTNTNLTTLF---NKYVDKNNVF---------SWNSVIADLARGGDSVEALRAFSS 63
V S +T LTT++ N+ + +F SWN++I+ + G + A+ F +
Sbjct: 164 VSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQT 223
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M+K ++ P T + +C+ + L G+ H F +V+VS+ALIDMY+KCG
Sbjct: 224 MQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGS 283
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
++ AR+LFD +P+ +N V+W +M++GY + + +EAL LF + L S +
Sbjct: 284 ITVARELFDLMPE--KNEVTWNAMISGYGLHGHGQEALKLFYDML------------SSS 329
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEG---AHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
V + SVL ACS + V EG H V GF+ ++D R G +
Sbjct: 330 VKPTGLTFLSVLYACSHAGL--VKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLK 387
Query: 241 VSRKVFDGM-IEKDAVTWNSIIA 262
+ + M +E W +++
Sbjct: 388 KALEFIKAMPVEPGPPVWGALLG 410
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 21/275 (7%)
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+I+ + +N +++ VF MV + + T+ AVL A+A L L+LG I IK
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
V + T +I ++ KCG+V++AR F ++++K++ S AMI+G+ + +++ LF
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG-VEHYGCMVDLLG 438
+++ +G R + T V ++ S G +L H F ++ G V H L
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYS-----PFGHSYLCNCIHGFCVKLGIVSHSSVSTALTT 175
Query: 439 RAGKLKE---AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LE 489
+L E A L + K W +++ C + D AA LF+ +
Sbjct: 176 VYCRLNEMIFARQLFDESAEKT-LASWNAMISGCTQNGLTD----AAISLFQTMQKNNVN 230
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRL 524
PN +LS A G E SL+K+ R
Sbjct: 231 PNPVTVTSILSAC-AQIGALSLGEWVHSLIKSNRF 264
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 269/663 (40%), Positives = 380/663 (57%), Gaps = 42/663 (6%)
Query: 2 KLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
KL + S S++ S + T +L +Y N F+ S ++A+ +
Sbjct: 8 KLKRPSPCSALSSLLKP----TFFASLSLQYQSPNPSFT--SSAPQFDNNQTHLKAIPSC 61
Query: 62 SSMRKLS--LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
S+ S LTPT S + ++SC A + GKQ H Q + GF D +++ L+++Y
Sbjct: 62 SNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYC 121
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
C LS AR LFD IP+ NI W ++ GY N A+ L+ +
Sbjct: 122 VCDSLSSARLLFDRIPKH--NIFLWNVLIRGYAWNGPYEAAVQLYYQMF----------- 168
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
+ D+ VL AC+ ++ H V++ G++ +V VG LID YA+ G V
Sbjct: 169 -DYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCV 227
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+R+VFD ++ +DAV WNS++A Y+QNG L + +MV T ++ TL + A
Sbjct: 228 GSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVL-TGLRPTEATLVTAISA 286
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A L G+ +H + + E V T+++DMY KCG V +AR F ++ K V SW
Sbjct: 287 SADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSW 346
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
AMI GY MH A EALDLF +M + +P++ITFV VLSACSH GL++EGW + TM
Sbjct: 347 NAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIR 405
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
++ I+P V+HY CMVDLLG +G+L EAY+LI MKV D VWG+LL +C+IH NV+LGE
Sbjct: 406 DYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGE 465
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
IA ++L ELEP++ G +V+LSNIYA AG+WE V + R LM +RRL K+ S +E++ KV
Sbjct: 466 IALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKV 525
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
HAFL GD HP ++IY LE + ++E GY SV HDV+ +EK + HSE+LA
Sbjct: 526 HAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLA 585
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLR+C DCH I+ ISK+ +REI VRD R+H+FKDG+CSCG
Sbjct: 586 IAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCG 645
Query: 642 DYW 644
DYW
Sbjct: 646 DYW 648
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/665 (38%), Positives = 392/665 (58%), Gaps = 62/665 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LFN + +W SVI G ++L +F M L P + FP +KSC+ L
Sbjct: 62 LFNT-IHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLM 120
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD-------ARKLFDEIPQRIRN 140
DL+ G+ H G D++ +AL++MYSK L + A ++FDE+ +R R+
Sbjct: 121 DLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRS 180
Query: 141 I-----------------------VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
+ VSW +++ G NAR L ++E L E GGA
Sbjct: 181 VRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAG-----NARNGL--YEETLRMIREMGGA 233
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
N+ DS ++SVL + + HG I++G D+++ V ++LID YA+
Sbjct: 234 -----NLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
V S +VF + E+D ++WNSIIA QNGL E L F QM+ + +K + + S+++
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMA-KIKPKSYSFSSIM 347
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A AHL L LGK +H + + +E++ + +S++DMY KCG + A++ F++M+ +++
Sbjct: 348 PACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMV 407
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SWTAMI G +H +A +A++LF +M G++PN++ F++VL+ACSH GLV E W + N+M
Sbjct: 408 SWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSM 467
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
+F I PGVEHY + DLLGRAG+L+EAYD I GM + +W +LL ACR+H N+D+
Sbjct: 468 TRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDM 527
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG 537
E A ++ E++PNN G ++LL+NIY+ A RW++ + R+ M+ + KTP S +E++
Sbjct: 528 AEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKN 587
Query: 538 KVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
KV+AF+ GD+ HP +EKI E +E L +++ GYV D + V HDV++E+K+ + HSE+
Sbjct: 588 KVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSER 647
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA NLRVC DCHT + ISK+V REIVVRD+ RFH+FK+G CS
Sbjct: 648 LAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCS 707
Query: 640 CGDYW 644
CGDYW
Sbjct: 708 CGDYW 712
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 114/275 (41%), Gaps = 65/275 (23%)
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
S ++F+ + A+ W S+I Y +GL ++L F M+ S + V +VL + A
Sbjct: 59 SLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV-FPSVLKSCA 117
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK-------------CGQV------- 341
L L LG+ +H +I++ L+ + G ++++MY K G+V
Sbjct: 118 LLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTER 177
Query: 342 ------------DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
D RK F M EK++ SW +IAG + E L + +M A ++P
Sbjct: 178 TRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKP 237
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC---------------MV 434
+ T SVL L+ E +I G E +GC ++
Sbjct: 238 DSFTLSSVLP------LIAE----------NVDISRGKEIHGCSIRQGLDADIYVASSLI 281
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
D+ + ++ ++ + + + D + W S++ C
Sbjct: 282 DMYAKCTRVADSCRVFT-LLTERDGISWNSIIAGC 315
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 261/659 (39%), Positives = 389/659 (59%), Gaps = 34/659 (5%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
S ++ +++V K + + +F K V+++ + +WN++I LA GG EA ++
Sbjct: 260 SDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRD-LIAWNTMIGGLAEGGYWEEASEVYNQ 318
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M++ + P + T+ + +C LH GK+ H + GF D+ V +ALI MYS+CG
Sbjct: 319 MQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGS 378
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ DAR +FD++ ++ +++SWT+M+ G ++ EAL +++E
Sbjct: 379 IKDARLVFDKMVRK--DVISWTAMIGGLAKSGFGAEALTVYQEM------------QQAG 424
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V + V S+L+ACS H V++ G ++ VGNTL++ Y+ G V +R
Sbjct: 425 VEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDAR 484
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+VFD MI++D V +N++I YA + L EAL +FD++ + +K + VT +L A A+
Sbjct: 485 QVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRL-QEEGLKPDKVTYINMLNACANS 543
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G L + IH V K VG +++ Y KCG A F +M ++NV SW A+I
Sbjct: 544 GSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAII 603
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
G H R ++AL LF +M GV+P+ +TFVS+LSACSHAGL++EG + +M +F I
Sbjct: 604 GGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAI 663
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
P +EHYGCMVDLLGRAG+L EA LI+ M +A+ +WG+LLGACRIH NV + E AA+
Sbjct: 664 IPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAE 723
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
+L+ +N +V LS++YA AG W+ + R LM+ R + K PG S +++ K+H F+
Sbjct: 724 SSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFV 783
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
D+ HPQ EKIY L+ L ++ GYV D SV+HDVD+ EKE + HSE+LA
Sbjct: 784 AEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYG 843
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT + ISK+VDREI+ RD RFH+FKDG+CSCGDYW
Sbjct: 844 LISTPPGTRIHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 231/448 (51%), Gaps = 24/448 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++K +V SW I A G S A F M + + P R T+ + + S+
Sbjct: 183 VFDK-MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPA 241
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H + G D V +AL+ MY+KCG D R++F+++ R++++W +M
Sbjct: 242 ALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVN--RDLIAWNTM 299
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G + EA ++ + + V + + +L+AC
Sbjct: 300 IGGLAEGGYWEEASEVYNQM------------QREGVMPNKITYVILLNACVNSAALHWG 347
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H V K GF S++GV N LI Y+R G + +R VFD M+ KD ++W ++I A++
Sbjct: 348 KEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKS 407
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G AEAL V+ +M + V+ N VT +++L A + L G+ IH QV++ L V
Sbjct: 408 GFGAEALTVYQEM-QQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHV 466
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G ++++MY CG V AR+ F++M ++++ ++ AMI GY H +EAL LF ++ + G+
Sbjct: 467 GNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGL 526
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHW---LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
+P+ +T++++L+AC+++G ++ W ++T+ + +V + G
Sbjct: 527 KPDKVTYINMLNACANSGSLE----WAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFS 582
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIH 472
+A + E M K + + W +++G H
Sbjct: 583 DASIVFEKM-TKRNVISWNAIIGGSAQH 609
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 146/496 (29%), Positives = 253/496 (51%), Gaps = 36/496 (7%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ V SWN+++ + G +AL+ M++ L P R+T + SC + L G++
Sbjct: 88 ERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGRE 147
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H QA G DV V++ +++MY+KCG + +AR++FD++ + +++VSWT + GY
Sbjct: 148 IHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEK--KSVVSWTITIGGYADC 205
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+ A +F++ + V + + SVL+A S + H +
Sbjct: 206 GRSETAFEIFQKM------------EQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRI 253
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+ G +S+ VG L+ YA+ G R+VF+ ++ +D + WN++I A+ G EA
Sbjct: 254 LNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEAS 313
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+V++QM + V N +T +L A + L GK IH +V K + V ++I M
Sbjct: 314 EVYNQMQRE-GVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISM 372
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y +CG + AR F++M K+V SWTAMI G EAL ++ +M +AGV PN +T+
Sbjct: 373 YSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTY 432
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV---EHYG-CMVDLLGRAGKLKEAYDLI 450
S+L+ACS ++ G H+ +E G+ H G +V++ G +K+A +
Sbjct: 433 TSILNACSSPAALEWG-----RRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVF 487
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLSNIYA 504
+ M ++ D V + +++G H +LG+ A KLF+ L+P+ Y +L N A
Sbjct: 488 DRM-IQRDIVAYNAMIGGYAAH---NLGK-EALKLFDRLQEEGLKPDKVTYINML-NACA 541
Query: 505 NAGRWEDVERTRSLMK 520
N+G E +L++
Sbjct: 542 NSGSLEWAREIHTLVR 557
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 196/394 (49%), Gaps = 25/394 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+K C + DL +G+Q HQ D + +ALI+MY +CG + +AR+++ ++ R
Sbjct: 30 LKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMER 89
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+ SW +M+ GY+Q +AL L ++ + D I S LS+C
Sbjct: 90 TVHSWNAMVVGYIQYGYIEKALKLLRQM------------QQHGLAPDRTTIMSFLSSCK 137
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
H ++ G +V V N +++ YA+ G ++ +R+VFD M +K V+W
Sbjct: 138 SPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTI 197
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
I YA G + A ++F +M + V N +T +VL A + L+ GK +H +++
Sbjct: 198 TIGGYADCGRSETAFEIFQKM-EQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNA 256
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
E VGT+++ MY KCG R+ F ++ +++ +W MI G EA +++
Sbjct: 257 GHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVY 316
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE-----FNIEPGVEHYGCMV 434
+M + GV PN IT+V +L+AC ++ + HW + F + GV++ ++
Sbjct: 317 NQMQREGVMPNKITYVILLNACVNSAAL----HWGKEIHSRVAKAGFTSDIGVQN--ALI 370
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ R G +K+A + + M V+ D + W +++G
Sbjct: 371 SMYSRCGSIKDARLVFDKM-VRKDVISWTAMIGG 403
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 131/302 (43%), Gaps = 32/302 (10%)
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
MIEKD ++ Q G + D + + +VK L
Sbjct: 1 MIEKDGAV--DVVQYLQQQGAQVNSSDYMKMLKRCIEVK-----------------DLVA 41
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK--EKNVRSWTAMIAGY 366
G+ +H +I+ ++I+MY +CG ++ AR+ + ++ E+ V SW AM+ GY
Sbjct: 42 GRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGY 101
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ +AL L +M + G+ P+ T +S LS+C G ++ G ++ + +
Sbjct: 102 IQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGRE-IHFQAMQAGLLFD 160
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
V+ C++++ + G ++EA ++ + M+ K V W +G + + E A +
Sbjct: 161 VKVANCILNMYAKCGSIEEAREVFDKME-KKSVVSWTITIGG---YADCGRSETAFEIFQ 216
Query: 487 ELE-----PNNCGYHVLLSNIYANAG-RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
++E PN Y +L+ + A +W +R L G +LV++ K
Sbjct: 217 KMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCG 276
Query: 541 AF 542
++
Sbjct: 277 SY 278
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 274/711 (38%), Positives = 385/711 (54%), Gaps = 102/711 (14%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++ +N F WN+++ + + +AL + M K ++ P T+P +++C+ G
Sbjct: 101 IENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGG 160
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H GF DV+V + LI+MY+ CG + DARKLFDE P + + VSW S+L GYV
Sbjct: 161 KEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESP--VLDSVSWNSILAGYV 218
Query: 153 QNDNAREALLLFKEF-----------------------------------------LLEE 171
+ + EA L+F + L+
Sbjct: 219 KKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISG 278
Query: 172 SECGGASE---------NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE 222
E G E N++ + +D V + SVLSAC+ +++ + HG VI+ G +S
Sbjct: 279 YEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESY 338
Query: 223 VGVGNTLIDAYA-------------------------------RGGHVDVSRKVFDGMIE 251
V + N LI Y+ + G V+ +R +FD M E
Sbjct: 339 VNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPE 398
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
KD V+W+++I+ YAQ+ +E L +F +M + ++ + L +V+ A HL L GK
Sbjct: 399 KDIVSWSAVISGYAQHDCFSETLALFHEM-QLGQIRPDETILVSVISACTHLAALDQGKW 457
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
+H + K L+ +VI+GT+++DMY KCG V+ A + FN M+EK V SW A+I G ++
Sbjct: 458 VHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGL 517
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
+LD+F +M GV PN ITF+ VL AC H GLV EG +M + IEP V+HYG
Sbjct: 518 VERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYG 577
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPN 491
CMVDLLGRAG L EA LIE M + D WG+LLGAC+ H + ++GE +KL EL+P+
Sbjct: 578 CMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPD 637
Query: 492 NCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQ 551
+ G+HVLLSNI+A+ G WEDV R +MK + + KTPG SL+E G VH FL GDK HP
Sbjct: 638 HDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPW 697
Query: 552 HEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------ 599
K+ L E+ +L+ GY D V D+D+EEKE TL HSEKLA
Sbjct: 698 INKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPT 757
Query: 600 ------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCHT +LISK REIVVRD RFHYFK+G CSC DYW
Sbjct: 758 PIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 213/452 (47%), Gaps = 83/452 (18%)
Query: 57 ALRAFSSMRKLSLTPTRSTF-------PCAIKSC--SALHDLHSGKQAHQ---QAFIFGF 104
+L S + +LS + +STF P S + LH+ H+ KQ ++ Q + GF
Sbjct: 11 SLMKLSKLNQLS-SALKSTFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGF 69
Query: 105 HRDVFVSSALIDMYSKCG--ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
D F +S L+ + L + ++FD I N W +M+ Y+Q+++A +ALL
Sbjct: 70 ISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENS--NGFMWNTMMRAYIQSNSAEKALL 127
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE 222
L+K + +NV D+ V+ AC+ + + H V+K GFDS+
Sbjct: 128 LYKLMV------------KNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSD 175
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
V V NTLI+ YA G++ +RK+FD D+V+WNSI+A Y + G EA +FDQM
Sbjct: 176 VYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMP- 234
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
+ +++ S+I + K GQV
Sbjct: 235 ---------------------------------------QRNIVASNSMIVLLGKMGQVM 255
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
A K FN+M EK++ SW+A+I+GY + EAL +F +M G+R + + VSVLSAC+
Sbjct: 256 EAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACA 315
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
H +V+ G M H I G+E Y ++ + +G++ +A L G D
Sbjct: 316 HLSIVKTG-----KMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSH-NLD 369
Query: 459 FVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
+ W S++ C +V+ A+ LF++ P
Sbjct: 370 QISWNSMISGCMKCGSVE----KARALFDVMP 397
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 192/405 (47%), Gaps = 51/405 (12%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LFN+ +D+ ++ SW+++I+ + G EAL F M + + +C+ L
Sbjct: 260 LFNE-MDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLS 318
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK------------------ 129
+ +GK H G V + +ALI MYS GE+ DA+K
Sbjct: 319 IVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMIS 378
Query: 130 -------------LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
LFD +P+ ++IVSW+++++GY Q+D E L LF E L +
Sbjct: 379 GCMKCGSVEKARALFDVMPE--KDIVSWSAVISGYAQHDCFSETLALFHEMQLGQ----- 431
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
+ D + SV+SAC+ + + H ++ K G V +G TL+D Y +
Sbjct: 432 -------IRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKC 484
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G V+ + +VF+GM EK +WN++I A NGL +LD+F +M K+ V N +T V
Sbjct: 485 GCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEM-KNNGVIPNEITFMGV 543
Query: 297 LLAIAHLGVLRLGKCIHDQVI-KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EK 354
L A H+G++ G+C +I K +E +V ++D+ + G ++ A K M
Sbjct: 544 LGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAP 603
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+V +W A++ H + K+I+ ++P++ F +LS
Sbjct: 604 DVATWGALLGACKKHGDTEMGERVGRKLIE--LQPDHDGFHVLLS 646
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/629 (41%), Positives = 369/629 (58%), Gaps = 38/629 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ +W+++IA L + G EAL F M+ + P R T + +C+ L L GK H
Sbjct: 394 DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIH 453
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
D+ +AL+ MY+KCG + A F+ + R +IV+W S++ GY Q +
Sbjct: 454 CFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR--DIVTWNSLINGYAQIGD 511
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFV 214
A+ +F + L + D+ + V+ AC+ +N + +G HG +
Sbjct: 512 PYNAIDMFYKLRLSA------------INPDAGTMVGVVPACA--LLNDLDQGTCIHGLI 557
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAEA 273
+K GF+S+ V N LID YA+ G + + +F+ KD VTWN IIA Y QNG A EA
Sbjct: 558 VKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEA 617
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+ F QM + + N+VT +VL A A+L R G H +I+M + +VG S+ID
Sbjct: 618 ISSFHQM-RLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLID 676
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY KCGQ+ + K FN+M K+ SW AM++GY +H A+ LF M ++ V+ + ++
Sbjct: 677 MYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVS 736
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
FVSVLSAC H GLV+EG ++M +++I+P +EHY CMVDLLGRAG E I+ M
Sbjct: 737 FVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVM 796
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
V+ D VWG+LLG+CR+H NV LGE+A L +LEP N + V+LS+IYA +GRW D
Sbjct: 797 PVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAG 856
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
+ RS M + L KTPG S VEL+ KVHAF VGDK HPQ E ++ L K++++GYV
Sbjct: 857 KARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVP 916
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
D + V+ +V++E+KEM L HSE+LA NLRVC DCHT + IS
Sbjct: 917 DRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFIS 976
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
K+ R I+VRD+ RFH+F+DG+CSC DYW
Sbjct: 977 KITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 143/467 (30%), Positives = 245/467 (52%), Gaps = 31/467 (6%)
Query: 12 VVSNVDKHSTNT---NLTTLFNKYVDKNNVFS---------WNSVIADLARGGDSVEALR 59
+VS H + T NL +LF+K +VF WNS+I R EAL
Sbjct: 56 IVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALE 115
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
+ M + L P + TF +K+C+ +L G H + G RDVF+ + L+DMYS
Sbjct: 116 MYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYS 175
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
K G+L AR++FD++P+R ++V+W +M+ G Q+++ EA+ F+ L E
Sbjct: 176 KMGDLKRAREVFDKMPKR--DVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVE------ 227
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
SV++ ++ +++ + HG+V +R F S V N LID Y++ G V
Sbjct: 228 ------PSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDV 279
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
DV+R+VFD M+++D V+W +++A YA NG E L++FD+M K +V+ N V+ + LA
Sbjct: 280 DVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM-KLGNVRINKVSAVSAFLA 338
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A L GK IH ++ ++ ++V T ++ MY KCG+ + A++ F ++ +++ +W
Sbjct: 339 AAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAW 398
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
+A+IA EAL LF +M ++PN +T +S+L AC+ L++ G ++
Sbjct: 399 SAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG-KSIHCFTV 457
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ +++ + +V + + G A M + D V W SL+
Sbjct: 458 KADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLI 503
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 189/388 (48%), Gaps = 28/388 (7%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
S S+ +++VS K T T FN+ + ++ +WNS+I A+ GD A+ F
Sbjct: 463 SDLSTGTALVSMYAKCGFFTAALTTFNR-MSSRDIVTWNSLINGYAQIGDPYNAIDMFYK 521
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
+R ++ P T + +C+ L+DL G H GF D V +ALIDMY+KCG
Sbjct: 522 LRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGS 581
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L A LF++ ++ V+W ++ Y+QN +A+EA+ F + LE N
Sbjct: 582 LPSAEFLFNKT-DFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLE------------N 628
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+SV SVL A + + H +I+ GF S VGN+LID YA+ G + S
Sbjct: 629 FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSE 688
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
K+F+ M KD V+WN++++ YA +G A+ +F M + + V+ ++V+ +VL A H
Sbjct: 689 KLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLM-QESQVQIDSVSFVSVLSACRHX 747
Query: 304 GVLRLGKCIHDQV-----IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVR 357
G++ G+ I + IK DLE ++D+ + G D M E +
Sbjct: 748 GLVEEGRKIFHSMSDKYHIKPDLEHY----ACMVDLLGRAGLFDETLGFIKVMPVEPDAG 803
Query: 358 SWTAMIAGYGMHCRAR---EALDLFYKM 382
W A++ MH + ALD K+
Sbjct: 804 VWGALLGSCRMHSNVKLGEVALDHLVKL 831
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 268/671 (39%), Positives = 388/671 (57%), Gaps = 69/671 (10%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
T++F + N + WN++I A D V +L + M L L P TFP +KSC+
Sbjct: 18 TSVFETIQEPNQLI-WNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 86 LHDLHSGKQAHQQAFIFGF-------------------------------HRDVFVSSAL 114
G+Q H Q GF HRDV +AL
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 115 IDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESEC 174
I Y+ G++ A+KLFDEIP ++++VSW +M++GY + +EAL LF+E +
Sbjct: 137 ITGYASRGDIRSAQKLFDEIP--VKDVVSWNAMISGYAETGCYKEALELFEEMM------ 188
Query: 175 GGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYA 234
NV D +VLSAC+ + H +V GFDS + + N LID Y+
Sbjct: 189 ------KMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYS 242
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
+ G V+ + +F G+ KD ++WN++I Y L EAL +F +M++S + N VT+
Sbjct: 243 KCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP-NDVTML 301
Query: 295 AVLLAIAHLGVLRLGKCIH---DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
+VL A AHLG + +G+ IH D+ +K + + + TS+IDMY KCG ++ A + FN M
Sbjct: 302 SVLPACAHLGAIDIGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 360
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
K++ SW AMI G+ MH RA + DLF +M K G+ P+ ITFV +LSACSH+G++ G
Sbjct: 361 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGR 420
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
H +M ++ + P +EHYGCM+DLLG +G KEA ++I M+++ D V+W SLL AC++
Sbjct: 421 HIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKM 480
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFS 531
H NV+L E A+ L ++EP N ++LLSNIYA+AGRWEDV R R+L+ + + K PG S
Sbjct: 481 HGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCS 540
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTL 591
+E+ V F+VGDK HPQ+ +IY LEE+ V L+E G+V D + V+ ++++E KE L
Sbjct: 541 SIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGAL 600
Query: 592 RIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF 633
R HSEKLA NLRVC +CH +L+SK+ REIV RD RFH+F
Sbjct: 601 RHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHF 660
Query: 634 KDGLCSCGDYW 644
+DG+CSC DYW
Sbjct: 661 RDGVCSCNDYW 671
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 136/277 (49%), Gaps = 43/277 (15%)
Query: 229 LIDAYARGGHVD---VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD 285
LI+ H D + VF+ + E + + WN++I +A + +L ++ MV S
Sbjct: 1 LIELCVPSPHFDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMV-SLG 59
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC------- 338
+ N+ T +L + A G+ IH QV+K+ + + V TS+I MY +
Sbjct: 60 LLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAY 119
Query: 339 ------------------------GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
G + A+K F+++ K+V SW AMI+GY +E
Sbjct: 120 KVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKE 179
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH---WLNTMGHEFNIEPGVEHYG 431
AL+LF +M+K VRP+ T+V+VLSAC+H+G ++ G W++ G + N++
Sbjct: 180 ALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKI----VN 235
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
++DL + G+++ A L +G+ K D + W +L+G
Sbjct: 236 ALIDLYSKCGEVETACGLFQGLSYK-DVISWNTLIGG 271
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/635 (40%), Positives = 373/635 (58%), Gaps = 67/635 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ ++KN VF +N +I VEAL F M + P TFPC +K+CS L
Sbjct: 93 IFDRSLEKNVVF-FNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLD 151
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L G Q H G ++F+ +AL+ MY KCG L +ARK+ D++P R ++VSW SM
Sbjct: 152 NLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYR--DVVSWNSM 209
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY Q+ +AL + KE +S N+ D+ +AS+
Sbjct: 210 VAGYAQSGQFDDALEICKEM------------DSLNLNHDAGTMASL------------- 244
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ + Y +V +F+ M +K+ ++WN +IAIY N
Sbjct: 245 --------------------SPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNN 284
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+ EA+ +F QM + +K +AVT++++L A L L LG+ +H + K +L+ ++++
Sbjct: 285 SMPNEAVSLFLQM-EECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLL 343
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+++DMY KCG ++ AR F++M+ ++V SWT+M++ YG + +A+ LF KM+ +G
Sbjct: 344 ENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQ 403
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ I FVSVLSACSH GL+ +G H+ M ++ I P +EH+ CMVDL GRAG+++EAY
Sbjct: 404 NPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAY 463
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I+ M ++ + VWG+LL ACR+H +D+G +AA LF+L P GY+VLLSNIYA AG
Sbjct: 464 SFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAG 523
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
W+DV R MK + K PG S VEL G+VH FL GD+ HPQ + IY L+ L K++
Sbjct: 524 MWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMK 583
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E+GY+ S +HDV+ E+KE L IHSEKLA NLRVCGDCH
Sbjct: 584 ELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHI 643
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+LISK+V R I+VRD RFH+F +G+CSCGDYW
Sbjct: 644 AIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 148/307 (48%), Gaps = 26/307 (8%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
L+ AY+ G V+R +FD +EK+ V +N +I Y N L EAL +F Q++ S
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIF-QVMLSCAFNP 135
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+ T VL A + L LR+G +HD ++K+ L+ ++ +G +++ MY KCG + ARK
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
+QM ++V SW +M+AGY + +AL++ +M + + T S+ + L
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSL-- 253
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK---VKADFVVWGSL 465
E +++ M E + + + M+ + EA L M+ +K D V SL
Sbjct: 254 ENVQYIHNM-FERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASL 312
Query: 466 LGAC----------RIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
L AC R+HK ++ G L+PN + LL ++YA G E+
Sbjct: 313 LPACGDLSALFLGRRLHKYIEKG--------NLQPNLLLENALL-DMYAKCGCLEEARDV 363
Query: 516 RSLMKNR 522
M+ R
Sbjct: 364 FDKMRLR 370
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 8/168 (4%)
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G+ L K VI L + ++ Y G+ +AR F++ EKNV + MI
Sbjct: 50 GIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMI 109
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM---GHE 420
Y + EAL +F M+ P++ TF VL ACS ++ G + + G +
Sbjct: 110 RSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLD 169
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
N+ G +V + G+ G L+EA +++ M + D V W S++
Sbjct: 170 TNLFIG----NALVAMYGKCGCLREARKVLDQMPYR-DVVSWNSMVAG 212
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 249/620 (40%), Positives = 381/620 (61%), Gaps = 33/620 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SWN++I+ + G++ AL + M+ + T + C+ D+ +G H
Sbjct: 186 DVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIH 245
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G DVFVS+ALI+MYSK G L DA+ +FD++ +R++VSW S++ Y QN++
Sbjct: 246 LHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQM--EVRDLVSWNSIIAAYEQNND 303
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
AL FK L GG + D + + S+ S S+++ ++ GFVI+
Sbjct: 304 PSTALRFFKGMQL-----GG-------IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIR 351
Query: 217 RGF-DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
R + D +V +GN L++ YA+ G+++ + VFD + KD ++WN+++ Y QNGLA+EA+D
Sbjct: 352 REWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAID 411
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
++ M + D N T +++ A +H+G L+ G IH ++IK L V V T +ID+Y
Sbjct: 412 AYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLY 471
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG+++ A F ++ W A+IA G+H R EAL LF M+ V+ ++ITFV
Sbjct: 472 GKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFV 531
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
S+LSACSH+GLV EG + M E+ I+P ++HYGCMVDLLGRAG L++AY+L+ M +
Sbjct: 532 SLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPI 591
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
+ D +WG+LL AC+I+ N +LG +A+ +L E++ N GY+VLLSNIYAN +WE V +
Sbjct: 592 QPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKV 651
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
RSL ++R L KTPG+S V + K F G++ HP++ +IY+ L+ L+ K++ +GYV D
Sbjct: 652 RSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDY 711
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
+ V D++++EKE L HSE+LA NLRVCGDCH + IS++
Sbjct: 712 SFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRI 771
Query: 618 VDREIVVRDSKRFHYFKDGL 637
+REIVVRDS RFH+FKDG+
Sbjct: 772 SEREIVVRDSNRFHHFKDGI 791
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 142/449 (31%), Positives = 246/449 (54%), Gaps = 30/449 (6%)
Query: 32 YVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS----LTPTRSTFPCAIKSCSALH 87
Y+ K N+FSWNS+I+ R G EA+ + + + L P TFP +K+C +L
Sbjct: 79 YIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLV 138
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D GK+ H F GF DVFV+++L+ +YS+ G L A K+F ++P ++++ SW +M
Sbjct: 139 D---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMP--VKDVGSWNAM 193
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV--TVNG 205
++G+ QN NA AL + + V +D++ +AS+L C++ +NG
Sbjct: 194 ISGFCQNGNAAGALGVLNRM------------KGEGVKMDTITVASILPVCAQSDDVING 241
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
V H V+K G DS+V V N LI+ Y++ G + ++ VFD M +D V+WNSIIA Y
Sbjct: 242 VL--IHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYE 299
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEES 324
QN + AL F M + ++ + +T+ ++ + L R+ + I VI+ + L++
Sbjct: 300 QNNDPSTALRFFKGM-QLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKD 358
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V++G ++++MY K G ++ A F+Q+ K+ SW ++ GY + A EA+D + M +
Sbjct: 359 VVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEE 418
Query: 385 A-GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
PN T+VS++ A SH G +Q+G ++ + ++ V C++DL G+ G+L
Sbjct: 419 CRDTIPNQGTWVSIIPAYSHVGALQQGMK-IHAKLIKNSLYLDVFVATCLIDLYGKCGRL 477
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++A L + + V W +++ + IH
Sbjct: 478 EDAMSLFYEIP-RDTSVPWNAIIASLGIH 505
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 200/379 (52%), Gaps = 15/379 (3%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++++ K+ H +FG +++ +S+ LI++Y G++S +R FD I + +NI SW S+
Sbjct: 34 NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHK--KNIFSWNSI 91
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ YV+ EA+ + S CGG ++ D +L AC + V+G
Sbjct: 92 ISAYVRFGKYHEAMNCVNQLF---SMCGGG-----HLRPDFYTFPPILKACVSL-VDG-- 140
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H V K GF+ +V V +L+ Y+R G +DV+ KVF M KD +WN++I+ + QN
Sbjct: 141 KKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQN 200
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G AA AL V ++M K VK + +T++++L A + G IH V+K L+ V V
Sbjct: 201 GNAAGALGVLNRM-KGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFV 259
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++I+MY K G++ A+ F+QM+ +++ SW ++IA Y + AL F M G+
Sbjct: 260 SNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
RP+ +T VS+ S S + L + ++ V +V++ + G + A+
Sbjct: 320 RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAH 379
Query: 448 DLIEGMKVKADFVVWGSLL 466
+ + + K D + W +L+
Sbjct: 380 TVFDQLPRK-DTISWNTLV 397
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 147/296 (49%), Gaps = 21/296 (7%)
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
S V VN T+ H ++ G + + LI+ Y G + +SR FD + +K+ +WN
Sbjct: 31 SCVNVNA-TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWN 89
Query: 259 SIIAIYAQNGLAAEALDVFDQ---MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
SII+ Y + G EA++ +Q M ++ + T +L A L GK +H
Sbjct: 90 SIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCC 146
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
V KM E+ V V S++ +Y + G +D+A K F M K+V SW AMI+G+ + A A
Sbjct: 147 VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGA 206
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG-WHWLNTMGHEFNIEPGVEHYGCMV 434
L + +M GV+ + IT S+L C+ + V G L+ + H + + V + ++
Sbjct: 207 LGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN--ALI 264
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG----------ACRIHKNVDLGEI 480
++ + G+L++A + + M+V+ D V W S++ A R K + LG I
Sbjct: 265 NMYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 260/636 (40%), Positives = 385/636 (60%), Gaps = 36/636 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-SLTPTRSTFPCAIKSCSAL 86
+F++ ++ V +WN+++A AR G + A+ M++ P T + +C+
Sbjct: 282 VFDRMPARDRV-AWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADA 340
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L + ++ H A GF V VS+A++D+Y KCG + ARK+FD + R N VSW +
Sbjct: 341 QALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDR--NSVSWNA 398
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ GY +N +A EAL LFK + E V V V++ + L AC +
Sbjct: 399 MIKGYAENGDATEALALFKRMVGE------------GVDVTDVSVLAALHACGELGFLDE 446
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H +++ G +S V V N LI Y + D++ +VFD + K V+WN++I Q
Sbjct: 447 GRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQ 506
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG + +A+ +F +M + +VK ++ TL +++ A+A + + IH I++ L++ V
Sbjct: 507 NGSSEDAVRLFSRM-QLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVY 565
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V T++IDMY KCG+V +AR FN ++++V +W AMI GYG H + A++LF +M +G
Sbjct: 566 VLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSG 625
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
PN TF+SVLSACSHAGLV EG + ++M ++ +EPG+EHYG MVDLLGRAGKL EA
Sbjct: 626 KVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEA 685
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
+ I+ M ++ V+G++LGAC++HKNV+L E +A+++FELEP YHVLL+NIYANA
Sbjct: 686 WSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANA 745
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
W+DV R R+ M+ + L KTPG+S+V+L+ ++H F G H Q + IY L +L ++
Sbjct: 746 SLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEI 805
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+ VGYV D T IHDV+ + K L HSEKLA NLRVC DCH
Sbjct: 806 KAVGYVPD-TDSIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCH 864
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LIS V REI++RD +RFH+FKDG CSCGDYW
Sbjct: 865 NATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 254/492 (51%), Gaps = 31/492 (6%)
Query: 57 ALRAFSSMRKLSLT-PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALI 115
AL AF++M S + P TF +K C+A DL +G+ H Q G + ++AL
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267
Query: 116 DMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG 175
+MY+KC DAR++FD +P R R V+W +++ GY +N A A+ + E+ E
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDR--VAWNALVAGYARNGLAEAAVGMVVRMQEEDGE-- 323
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
D+V + SVL AC+ G H F ++ GFD +V V ++D Y +
Sbjct: 324 ---------RPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCK 374
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
G VD +RKVFDGM ++++V+WN++I YA+NG A EAL +F +MV V V++ A
Sbjct: 375 CGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMV-GEGVDVTDVSVLA 433
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
L A LG L G+ +H+ ++++ LE +V V ++I MYCKC + DLA + F+++ K
Sbjct: 434 ALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKT 493
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
SW AMI G + + +A+ LF +M V+P+ T VS++ A + + W++
Sbjct: 494 RVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQA-RWIH 552
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
+++ V ++D+ + G++ A L + + + W +++ H +
Sbjct: 553 GYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDR-HVITWNAMIHGYGSHGS- 610
Query: 476 DLGEIAAKKLFELE-----PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
G++A + E++ PN + +LS ++AG ++ + S MK PG
Sbjct: 611 --GKVAVELFEEMKSSGKVPNETTFLSVLSAC-SHAGLVDEGQEYFSSMKE-DYGLEPGM 666
Query: 531 ----SLVELRGK 538
++V+L G+
Sbjct: 667 EHYGTMVDLLGR 678
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/626 (41%), Positives = 374/626 (59%), Gaps = 33/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SW ++A A E+L+ F+ MR + P T A+KSC L + GK H
Sbjct: 201 DMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVH 260
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A + D+FV AL+++Y+K GE+ DA++LF+E+P+ +++ W+ M+ Y Q+D
Sbjct: 261 GCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKT--DLIPWSLMIARYAQSDR 318
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
++EAL LF +V ++ ASVL AC+ + + H V+K
Sbjct: 319 SKEALDLFLRM------------RQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLK 366
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G +S V V N ++D YA+ G ++ S K+F+ + +++ VTWN+II Y Q G A+++
Sbjct: 367 FGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNL 426
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F M++ D++ VT S+VL A A L L G IH IK + +V S+IDMY
Sbjct: 427 FTHMLEH-DMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYA 485
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG+++ AR F++M +++ SW AMI GY MH + EAL+LF M +PN +TFV
Sbjct: 486 KCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVG 545
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VLSACS+AGL+ +G +M +++I+P +EHY CMV LLGR G+ EA LI + +
Sbjct: 546 VLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQ 605
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
+VW +LLGAC IHK VDLG + A+ + E+EP++ HVLLSN+YA AGRW++V R
Sbjct: 606 PSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVR 665
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
M+ +++ K PG S VE +G VH F VGD HP + I LE LN K ++ GYV D
Sbjct: 666 KYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCN 725
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
+V+ DV +EKE L +HSE+LA NLR+C DCHTV++LISKVV
Sbjct: 726 AVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVV 785
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
REIV+RD RFH+F+ G+CSCGDYW
Sbjct: 786 QREIVIRDINRFHHFRHGVCSCGDYW 811
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 191/376 (50%), Gaps = 17/376 (4%)
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+GK H G D+F + L++ Y + L DA KLFDE+PQ N +S+ ++ G
Sbjct: 53 AGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQ--TNTISFVTLAQG 110
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y ++ +AL E E V+ ++L + + +
Sbjct: 111 YSRDHQFHQALHFILRIFKEGHE------------VNPFVFTTLLKLLVSMDLAHLCWTL 158
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H V K G ++ VG LIDAY+ G+VDV+R VFD + KD V+W ++A YA+N
Sbjct: 159 HACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFY 218
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
E+L +F+QM + K N T+S L + L +GK +H +K + + VG +
Sbjct: 219 EESLQLFNQM-RIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIA 277
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++++Y K G++ A++ F +M + ++ W+ MIA Y R++EALDLF +M + V PN
Sbjct: 278 LLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPN 337
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
TF SVL AC+ + + G +++ +F + V ++D+ + G+++ + L
Sbjct: 338 NFTFASVLQACASSVSLDLGKQ-IHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLF 396
Query: 451 EGMKVKADFVVWGSLL 466
E + + D V W +++
Sbjct: 397 EELPDRND-VTWNTII 411
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 153/325 (47%), Gaps = 18/325 (5%)
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M++ + D+ + + LL + + +C A +DS + A +L R + +
Sbjct: 1 MISRTIVRDSTKLSQLLHQCRNIHHQQCLSA--------LDSHSYAHMLQQIIRNGADPI 52
Query: 207 T-EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H ++KRG ++ N L++ Y + + + K+FD M + + +++ ++ Y+
Sbjct: 53 AGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYS 112
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
++ +AL ++ K + N + +L + + + L +H V K+
Sbjct: 113 RDHQFHQALHFILRIFKEGH-EVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADA 171
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VGT++ID Y G VD+AR F+ + K++ SWT M+A Y +C E+L LF +M
Sbjct: 172 FVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIM 231
Query: 386 GVRPNYITFVSVLSAC--SHAGLVQEGWHWLNTMG-HEFNIEPGVEHYGCMVDLLGRAGK 442
G +PN T L +C A V + H G ++ ++ G+ +++L ++G+
Sbjct: 232 GYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIA----LLELYAKSGE 287
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLG 467
+ +A L E M K D + W ++
Sbjct: 288 IIDAQRLFEEMP-KTDLIPWSLMIA 311
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 261/635 (41%), Positives = 378/635 (59%), Gaps = 67/635 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ KN VF +N +I +AL F +M + P T+PC +K+ S
Sbjct: 1082 IFDEIPKKNVVF-FNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSE 1140
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL G Q H G +VFV + LI MY KCG L +A ++ DZ+P R++VSW S+
Sbjct: 1141 DLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMP--CRDVVSWNSL 1198
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G +N +AL + KE L + D+ +AS+L A
Sbjct: 1199 VAGCARNGQFDDALEVCKEMELL------------GLKPDAGTMASLLPA---------- 1236
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
V NT +D +V +++F + K V+WN +IA+Y N
Sbjct: 1237 -----------------VTNTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNN 1273
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+ AEA+D+F QM + V +A+++++VL A L L LG+ IH+ V++ L+ ++++
Sbjct: 1274 SMPAEAVDIFLQM-EDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLL 1332
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++IDMY KCG ++ AR+ F+QMK ++V SWT+MI+ YGM+ + R+A+ LF +M G+
Sbjct: 1333 ENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGL 1392
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ I FVSVLSACSHAGL+ EG ++ M E I P +EH+ CMVDLLGRAG++ EAY
Sbjct: 1393 NPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAY 1452
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I+ M ++ + VWG+LL ACR++ N+ +G +AA +LF+L P GY+VLLSNIYA AG
Sbjct: 1453 GFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAG 1512
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RWEDV RS+MK + + K PG S EL +VH FL GD+ HPQ ++IYE L+ L K++
Sbjct: 1513 RWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMK 1572
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E GYV + S +HDV++E+KE L +HSEKLA NLRVCGDCH
Sbjct: 1573 EAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHI 1632
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LISK+V REI +RD+ RFH+F +G+CSCGDYW
Sbjct: 1633 AAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 166/369 (44%), Gaps = 58/369 (15%)
Query: 104 FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
H + + L+ Y+ CGE R +FDEIP+ +N+V + M+ YV N +ALL+
Sbjct: 1056 LHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPK--KNVVFFNVMIRSYVNNHLYSDALLV 1113
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEV 223
FK + D VL A S V H V++ G D V
Sbjct: 1114 FKNMA------------GHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNV 1161
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
VGN LI Y + G + + +V D M +D V+WNS++A A+NG +AL+V +M +
Sbjct: 1162 FVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEM-EL 1220
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL 343
+K +A T++++L A+ + C+ + V
Sbjct: 1221 LGLKPDAGTMASLLPAVTN-------TCLDN--------------------------VSF 1247
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
++ F ++ K++ SW MIA Y + EA+D+F +M V P+ I+ SVL AC
Sbjct: 1248 VKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGD 1307
Query: 404 AGLVQEGWHWLNTMGHEF----NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
+ L HE+ ++P + ++D+ + G L+ A ++ + MK + D
Sbjct: 1308 LSAL-----LLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR-DV 1361
Query: 460 VVWGSLLGA 468
V W S++ A
Sbjct: 1362 VSWTSMISA 1370
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 14/315 (4%)
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
I S +G L+ AYA G +R +FD + +K+ V +N +I Y N L ++AL
Sbjct: 1052 IDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDAL 1111
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
VF M + + T VL A + L +G IH V+++ L+ +V VG +I M
Sbjct: 1112 LVFKNMA-GHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISM 1170
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y KCG + A + +ZM ++V SW +++AG + + +AL++ +M G++P+ T
Sbjct: 1171 YGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTM 1230
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL---IE 451
S+L A ++ L + ++ M + + V + M+ + EA D+ +E
Sbjct: 1231 ASLLPAVTNTCL--DNVSFVKEMFMKLANKSLVS-WNVMIAVYMNNSMPAEAVDIFLQME 1287
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLG----EIAAKKLFELEPNNCGYHVLLSNIYANAG 507
V D + S+L AC + LG E +K L+PN + L+ ++YA G
Sbjct: 1288 DHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRK--RLQPNLLLENALI-DMYAKCG 1344
Query: 508 RWEDVERTRSLMKNR 522
E MK R
Sbjct: 1345 CLEYAREVFDQMKFR 1359
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 310 KCIHDQV-IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
K +H ++ I DL + +G ++ Y CG+ R F+++ +KNV + MI Y
Sbjct: 1044 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 1103
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGWHWLNTM 417
+ +AL +F M G+ P++ T+ VL A S HA +V+ +
Sbjct: 1104 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVR--------V 1155
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G + N+ G ++ + G+ G L EA +++ M + D V W SL+ C
Sbjct: 1156 GLDLNVFVG----NGLISMYGKCGCLVEACRVLDZMPCR-DVVSWNSLVAGC 1202
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/637 (39%), Positives = 368/637 (57%), Gaps = 36/637 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K ++ +V SW+++I R G EAL M + + P+ + L
Sbjct: 181 LFDK-IENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELA 239
Query: 88 DLHSGKQAHQQAFIFG--FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
DL GK H G V + +ALIDMY KC L+ AR++FD + + +I+SWT
Sbjct: 240 DLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKA--SIISWT 297
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M+ Y+ +N E + LF + L E +F + + + S++ C
Sbjct: 298 AMIAAYIHCNNLNEGVRLFVKMLGE------------GMFPNEITMLSLVKECGTAGALE 345
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ + H F ++ GF + + ID Y + G V +R VFD KD + W+++I+ YA
Sbjct: 346 LGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYA 405
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QN EA D+F M ++ N T+ ++L+ A G L +GK IH + K ++ +
Sbjct: 406 QNNCIDEAFDIFVHMT-GCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDM 464
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
I+ TS +DMY CG +D A + F + ++++ W AMI+G+ MH AL+LF +M
Sbjct: 465 ILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEAL 524
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
GV PN ITF+ L ACSH+GL+QEG + M HEF P VEHYGCMVDLLGRAG L E
Sbjct: 525 GVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDE 584
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A++LI+ M ++ + V+GS L AC++HKN+ LGE AAK+ LEP+ GY+VL+SNIYA+
Sbjct: 585 AHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYAS 644
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
A RW DV R MK+ + K PG S +E+ G +H F++GD+EHP +K+YE ++E+ K
Sbjct: 645 ANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREK 704
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
L++ GY D++ V+H++D+E+K L HSEKLA NLRVC DC
Sbjct: 705 LEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDC 764
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H +L+SK+ REI+VRD RFH+FK+G CSC DYW
Sbjct: 765 HNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 237/492 (48%), Gaps = 44/492 (8%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
+K S + S ++ ++ +S+N + + KNN +A +
Sbjct: 67 IKTSSNCSYRVPLAALESYSSNAAIHSFLITSYIKNNC---------------PADAAKI 111
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
++ MR P +K+C + G++ H GFH DVFV +ALI MYS+
Sbjct: 112 YAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSE 171
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE---FLLEESECGGA 177
G L+ AR LFD+I +++VSW++M+ Y ++ EAL L ++ ++ SE G
Sbjct: 172 VGSLALARLLFDKIEN--KDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIG-- 227
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVG--NTLIDAYAR 235
++I VL+ + + + + H +V++ G + GV LID Y +
Sbjct: 228 ----------MISITHVLAELADLKLG---KAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
++ +R+VFDG+ + ++W ++IA Y E + +F +M+ + N +T+ +
Sbjct: 275 CENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKML-GEGMFPNEITMLS 333
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
++ G L LGK +H ++ S+++ T+ IDMY KCG V AR F+ K K+
Sbjct: 334 LVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKD 393
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
+ W+AMI+ Y + EA D+F M G+RPN T VS+L C+ AG ++ G W++
Sbjct: 394 LMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMG-KWIH 452
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
+ + I+ + VD+ G + A+ L D +W +++ +H +
Sbjct: 453 SYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLF-AEATDRDISMWNAMISGFAMHGH- 510
Query: 476 DLGEIAAKKLFE 487
GE AA +LFE
Sbjct: 511 --GE-AALELFE 519
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 253/656 (38%), Positives = 371/656 (56%), Gaps = 66/656 (10%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
WN VI + AL ++ +RK+ P +K+C + GK+ H
Sbjct: 91 QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 150
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G RDVFV +AL+ MY +C + AR +FD++ +R ++VSW++M+ +N
Sbjct: 151 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER--DVVSWSTMIRSLSRNKEFDM 208
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
AL L +E N V VA+ S+++ + + + H +VI+
Sbjct: 209 ALELIREM------------NFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSN 256
Query: 220 DSEVGVGNT--LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA--------------- 262
+ +GV T L+D YA+ GH+ ++R++F+G+ +K V+W ++IA
Sbjct: 257 NEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALF 316
Query: 263 ----------------IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
YAQ +A ++FDQM +++ V+ VT+ ++L A G L
Sbjct: 317 DSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQM-RTSGVRPTKVTIVSLLSLCAVAGAL 375
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
LGK +H + K +E I+ T+++DMY KCG ++ A + F + +++ W A+I G+
Sbjct: 376 DLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGF 435
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
MH EALD+F +M + GV+PN ITF+ +L ACSHAGLV EG M H F + P
Sbjct: 436 AMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQ 495
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
+EHYGCMVDLLGRAG L EA+++I+ M +K + +VWG+L+ ACR+HKN LGE+AA +L
Sbjct: 496 IEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLL 555
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
E+EP NCGY+VL+SNIYA A RW D R MK + K PG S++E+ G VH FL+GD
Sbjct: 556 EIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGD 615
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
+ HPQ +I E L E+ KL E GYV D ++V+ ++D+EEKE L HSEKLA
Sbjct: 616 QSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLIS 675
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH +L+SK+ R I+VRD RFH+F++G CSCGDYW
Sbjct: 676 TAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 206/472 (43%), Gaps = 77/472 (16%)
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
L PT P S L L KQ H FH + +
Sbjct: 34 LKFNPTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHFHHALQIP--------------- 78
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
++ P + W ++T Y + + R AL ++ + + E V
Sbjct: 79 ----LNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFE------------V 122
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D+ SVL AC +V+ + + HGFV+K+G D +V VGN L+ Y V+ +R VF
Sbjct: 123 DNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVF 182
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D M+E+D V+W+++I ++N AL++ +M V+ + V + +++ A +
Sbjct: 183 DKMMERDVVSWSTMIRSLSRNKEFDMALELIREM-NFMQVRPSEVAMVSMVNLFADTANM 241
Query: 307 RLGKCIHDQVIKMDLEE--SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
R+GK +H VI+ E V T+++DMY KCG + LAR+ FN + +K V SWTAMIA
Sbjct: 242 RMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIA 301
Query: 365 G-------------------------------YGMHCRAREALDLFYKMIKAGVRPNYIT 393
G Y +A +LF +M +GVRP +T
Sbjct: 302 GCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVT 361
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL-IEG 452
VS+LS C+ AG + G W+++ + +E +VD+ + G + A L IE
Sbjct: 362 IVSLLSLCAVAGALDLG-KWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEA 420
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE-----PNNCGYHVLL 499
+ D +W +++ +H GE A E+E PN+ + LL
Sbjct: 421 --ISRDICMWNAIITGFAMH---GYGEEALDIFAEMERQGVKPNDITFIGLL 467
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 21/239 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +++ V W ++++ A+ +A F MR + PT+ T + C+
Sbjct: 315 LFDSTQNRD-VMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAG 373
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H D +++AL+DMY+KCG+++ A +LF E R+I W ++
Sbjct: 374 ALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAIS--RDICMWNAI 431
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+TG+ + EAL +F E E G N D F+ +L ACS + VT
Sbjct: 432 ITGFAMHGYGEEALDIFAEM-----ERQGVKPN-DITFI------GLLHACSHAGL--VT 477
Query: 208 EGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
EG F V G ++ ++D R G +D + ++ M I+ + + W +++A
Sbjct: 478 EGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVA 536
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 22 NTNLTTLFNKYVDKN------------NVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
NT L ++ K D N ++ WN++I A G EAL F+ M + +
Sbjct: 397 NTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGV 456
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQ-AFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
P TF + +CS + GK+ ++ FG + ++D+ + G L +A
Sbjct: 457 KPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAH 516
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL-LEESECG 175
++ +P + IV W +++ + N + L + L +E CG
Sbjct: 517 EMIKSMPIKPNTIV-WGALVAACRLHKNPQLGELAATQLLEIEPENCG 563
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/624 (40%), Positives = 372/624 (59%), Gaps = 35/624 (5%)
Query: 39 FSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQ 98
++ NS+I EAL + M L P R TFP KSC + GKQ H
Sbjct: 54 YTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQIHCH 110
Query: 99 AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR 158
+ GF D + + L++MYS CG L ARK+FD++ + +VSW +M+ + Q D
Sbjct: 111 STKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDK--TVVSWATMIGVHAQWDQPN 168
Query: 159 EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG 218
EA+ LF + S+NV + V + +VL+AC+R + + H ++ + G
Sbjct: 169 EAVRLFDRMM-----------KSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHG 217
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
F V + L+D Y + G V ++R +FD EK+ +WN +I + ++ EAL +F
Sbjct: 218 FGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFR 277
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
+M ++ +K + VT++++LLA HLG L LGK +H + K ++ V +GT+++DMY KC
Sbjct: 278 EM-QTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKC 336
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G ++ A + F++M EK+V +WTA+I G M +A AL F +M GV+P+ ITFV VL
Sbjct: 337 GSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVL 396
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
+ACSHAG V EG N+M + I+P +EHYG +VD+LGRAG++ EA +LI+ M + D
Sbjct: 397 AACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPD 456
Query: 459 FVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSL 518
V G LLGACRIH N++ E AAK+L E++P + G +VLLSNIY ++ +WE+ +RTR L
Sbjct: 457 QFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTREL 516
Query: 519 MKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSV 578
M R + K PG S +E+ G VH F+ GD H Q +I E LE++ KL+ GYV D + V
Sbjct: 517 MAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEV 576
Query: 579 IHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
+ D+ +EEKE L +HSEKLA NLR+C DCH+ +LISK+ +R
Sbjct: 577 LFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNR 636
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
EI+VRD RFH+FKDG CSC +W
Sbjct: 637 EIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 144/332 (43%), Gaps = 54/332 (16%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K +KN +FSWN +I + EAL F M+ + + T + +C+ L
Sbjct: 244 LFDKAQEKN-LFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLG 302
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H DV + +AL+DMY+KCG + A ++F E+P+ +++++WT++
Sbjct: 303 ALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPE--KDVMTWTAL 360
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G A AL F E ++ V D++ VL+ACS
Sbjct: 361 ILGLAMCGQAENALQYFDEMHIK------------GVKPDAITFVGVLAACSHA------ 402
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
GFV D + N++ D Y I+ + ++ I +
Sbjct: 403 ----GFV-----DEGISHFNSMSDTYG---------------IQPTIEHYGGLVDILGRA 438
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G AEA ++++KS + + L +L A G L + Q++++D S
Sbjct: 439 GRIAEA----EELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHS--- 491
Query: 328 GTSII--DMYCKCGQVDLARKAFNQMKEKNVR 357
GT ++ ++Y + + A++ M E+ +R
Sbjct: 492 GTYVLLSNIYKSSKKWEEAKRTRELMAERGMR 523
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 5/169 (2%)
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G + +R VF + + T NSII L EAL + +M+ + + T ++
Sbjct: 36 GSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIP-DRYTFPSL 94
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
+ + GK IH K+ ++++MY CG + ARK F++M++K V
Sbjct: 95 FKSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTV 151
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKA-GVRPNYITFVSVLSACSHA 404
SW MI + + EA+ LF +M+K+ V+PN +T V+VL+AC+ A
Sbjct: 152 VSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARA 200
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 259/663 (39%), Positives = 385/663 (58%), Gaps = 66/663 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ WN++ A D V AL + M L L P TFP +KSC+ G
Sbjct: 48 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 107
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR------------------------ 128
+Q H G+ D++V ++LI MY + G L DAR
Sbjct: 108 QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASK 167
Query: 129 -------KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
K+FDEIP I+++VSW +M++GY + N +EAL LFKE +
Sbjct: 168 GYIASAQKMFDEIP--IKDVVSWNAMISGYAETGNNKEALELFKEMM------------K 213
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
NV D + SV+SAC++ + H ++ GF S + + N LID Y + G V+
Sbjct: 214 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 273
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ +F+G+ KD ++WN++I Y L EAL +F +M++S + N VT+ ++L A A
Sbjct: 274 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESP-NDVTMLSILPACA 332
Query: 302 HLGVLRLGKCIHDQVIKM--DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
HLG + +G+ IH + K + + TS+IDMY KCG ++ A++ F+ + +++ SW
Sbjct: 333 HLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSW 392
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
AMI G+ MH RA A D+F +M K + P+ ITFV +LSACSH+G++ G H +M
Sbjct: 393 NAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKE 452
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
++ I P +EHYGCM+DLLG +G KEA ++I M+++ D V+W SLL AC++H NV+LGE
Sbjct: 453 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGE 512
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
A+ L ++EP N G +VLLSNIYA AGRW +V + R+L+ ++ + K PG S +E+ V
Sbjct: 513 SYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVV 572
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
H F++GDK HP++ +IY LEE+ V L+E G+V D + V+ ++++E KE LR HSEKLA
Sbjct: 573 HEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 632
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLRVC +CH +LISK+ REI+ RD RFH+F+DG+CSC
Sbjct: 633 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 692
Query: 642 DYW 644
DYW
Sbjct: 693 DYW 695
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 28/278 (10%)
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD---LARKAFNQMKEKNVRSWTAMIAGY 366
+ IH Q+IK L + + +I+ D A F ++E N+ W M G+
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ AL L+ MI G+ PN TF +L +C+ + +EG GH +
Sbjct: 64 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQ---IHGHVLKLGYD 120
Query: 427 VEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA-AK 483
++ Y ++ + + G+L++A + + D V + +L I G IA A+
Sbjct: 121 LDLYVHTSLISMYVQNGRLEDARKVFD-QSSHRDVVSYTAL-----ITGYASKGYIASAQ 174
Query: 484 KLFELEP--NNCGYHVLLSNIYANAGRWEDVERTRSLMK-NRRLAKTPGFSLV------- 533
K+F+ P + ++ ++S E +E + +MK N R ++ S+V
Sbjct: 175 KMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSA 234
Query: 534 --ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
EL +VH++ + D + KI L +L +K EV
Sbjct: 235 SIELGRQVHSW-IDDHGFGSNLKIVNALIDLYIKCGEV 271
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/595 (42%), Positives = 361/595 (60%), Gaps = 34/595 (5%)
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
SL P R+ + +K C+ L L GK H F D+ + ++L+ MY++CG L A
Sbjct: 69 SLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGA 128
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R+LFDE+P R ++VSWTSM+TGY QND A +ALLLF L SD +
Sbjct: 129 RRLFDEMPHR--DMVSWTSMITGYAQNDRASDALLLFPRML------------SDGAEPN 174
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
++S++ C + H K G S V VG++L+D YAR G++ + VFD
Sbjct: 175 EFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFD 234
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ K+ V+WN++IA YA+ G EAL +F +M + + T SA+L + + +G L
Sbjct: 235 KLGCKNEVSWNALIAGYARKGEGEEALALFVRMQRE-GYRPTEFTYSALLSSCSSMGCLE 293
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
GK +H ++K + VG +++ MY K G + A K F+++ + +V S +M+ GY
Sbjct: 294 QGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYA 353
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
H +EA F +MI+ G+ PN ITF+SVL+ACSHA L+ EG H+ M ++NIEP V
Sbjct: 354 QHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLM-RKYNIEPKV 412
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
HY +VDLLGRAG L +A IE M ++ +WG+LLGA ++HKN ++G AA+++FE
Sbjct: 413 SHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFE 472
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
L+P+ G H LL+NIYA+AGRWEDV + R +MK+ + K P S VE+ VH F+ D
Sbjct: 473 LDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDV 532
Query: 548 EHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------- 599
HPQ EKI++ E+LN K++E+GYV D + V+ VDQ+EKE+ L+ HSEKLA
Sbjct: 533 AHPQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNT 592
Query: 600 ----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
N+RVCGDCH+ I+ +S VV REI+VRD+ RFH+F DG CSCGDYW
Sbjct: 593 PPGSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 171/343 (49%), Gaps = 17/343 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ ++ V SW S+I A+ + +AL F M P T +K C +
Sbjct: 131 LFDEMPHRDMV-SWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G+Q H + +G H +VFV S+L+DMY++CG L +A +FD++ +N VSW ++
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLG--CKNEVSWNAL 247
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + EAL LF + +++LS+CS +
Sbjct: 248 IAGYARKGEGEEALALFVRM------------QREGYRPTEFTYSALLSSCSSMGCLEQG 295
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H ++K VGNTL+ YA+ G + + KVFD +++ D V+ NS++ YAQ+
Sbjct: 296 KWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQH 355
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL EA FD+M++ ++ N +T +VL A +H +L GK + K ++E V
Sbjct: 356 GLGKEAAQQFDEMIR-FGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSH 414
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+I+D+ + G +D A+ +M E V W A++ MH
Sbjct: 415 YATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMH 457
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/635 (40%), Positives = 380/635 (59%), Gaps = 34/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F K V+++ + +WN++I LA GG+ EA + M++ + P + T+ + +C
Sbjct: 402 VFEKLVNRD-LIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPT 460
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
LH G++ H + GF D+ V +ALI MY++CG + DAR LF+++ ++ +I+SWT+M
Sbjct: 461 ALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRK--DIISWTAM 518
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G ++ EAL +F++ + G N V S+L+ACS
Sbjct: 519 IGGLAKSGLGAEALAVFQDM-----QQAGLKPNR-------VTYTSILNACSSPAALDWG 566
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H VI+ G ++ V NTL++ Y+ G V +R+VFD M ++D V +N++I YA +
Sbjct: 567 RRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAH 626
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
L EAL +FD++ + +K + VT +L A A+ G L K IH V+K +
Sbjct: 627 NLGKEALKLFDRL-QEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSL 685
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G +++ Y KCG A F++M ++NV SW A+I G H R ++ L LF +M G+
Sbjct: 686 GNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGI 745
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+P+ +TFVS+LSACSHAGL++EG + +M +F I P +EHYGCMVDLLGRAG+L E
Sbjct: 746 KPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVE 805
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
LI+ M +A+ +WG+LLGACRIH NV + E AA+ +L+P+N +V LS++YA AG
Sbjct: 806 ALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAG 865
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
W+ + R LM+ R + K PG S +E+ K+H F+ D+ HP+ EKIY L++L ++
Sbjct: 866 MWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMK 925
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV D SV+HDVD+ EKE + HSE+LA NLRVC DCHT
Sbjct: 926 MEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHT 985
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ I+K+VDREIV RD RFH+FKDG+CSCGDYW
Sbjct: 986 ATKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 146/521 (28%), Positives = 266/521 (51%), Gaps = 34/521 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++ +V SW +I A G S A F M++ + P R T+ + + S
Sbjct: 301 VFDK-METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPA 359
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H G D+ V +AL+ MY+KCG D R++F+++ R++++W +M
Sbjct: 360 ALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVN--RDLIAWNTM 417
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G + N EA ++ + E + + + +L+AC T
Sbjct: 418 IGGLAEGGNWEEASEIYHQMQRE------------GMMPNKITYVILLNACVNPTALHWG 465
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H V+K GF ++ V N LI YAR G + +R +F+ M+ KD ++W ++I A++
Sbjct: 466 REIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKS 525
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL AEAL VF M + +K N VT +++L A + L G+ IH QVI+ L V
Sbjct: 526 GLGAEALAVFQDM-QQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHV 584
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++++MY CG V AR+ F++M ++++ ++ AMI GY H +EAL LF ++ + G+
Sbjct: 585 ANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGL 644
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRAGKL 443
+P+ +T++++L+AC+++G ++ W + H ++ G +V + G
Sbjct: 645 KPDKVTYINMLNACANSGSLE----WAKEI-HSLVLKDGYLSDTSLGNALVSTYAKCGSF 699
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIH-KNVDLGEIAAK-KLFELEPNNCGYHVLLSN 501
+A + + M +K + + W +++G C H + D+ ++ + K+ ++P+ + LLS
Sbjct: 700 SDALLVFDKM-MKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSA 758
Query: 502 IYANAGRWEDVERTRSLMKNRRLAKTPGFS----LVELRGK 538
++AG E+ R M +R TP +V+L G+
Sbjct: 759 C-SHAGLLEEGRRYFCSM-SRDFGITPTIEHYGCMVDLLGR 797
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/529 (28%), Positives = 265/529 (50%), Gaps = 42/529 (7%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ V SWN+++ + G EAL+ M++ L R+T + SC + L G++
Sbjct: 206 ERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGRE 265
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H +A DV V++ +++MY+KCG + +AR++FD++ +++VSWT ++ GY
Sbjct: 266 IHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKM--ETKSVVSWTIIIGGYADC 323
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
++ A +F++ + V + + +VL+A S + H +
Sbjct: 324 GHSEIAFEIFQKM------------QQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHI 371
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+ G +S++ VG L+ YA+ G R+VF+ ++ +D + WN++I A+ G EA
Sbjct: 372 LNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEAS 431
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+++ QM + + N +T +L A + L G+ IH +V+K + V ++I M
Sbjct: 432 EIYHQMQRE-GMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISM 490
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y +CG + AR FN+M K++ SWTAMI G EAL +F M +AG++PN +T+
Sbjct: 491 YARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTY 550
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLI 450
S+L+ACS + G H+ IE G+ +V++ G +K+A +
Sbjct: 551 TSILNACSSPAALDWG-----RRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVF 605
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLSNIYA 504
+ M + D V + +++G H +LG+ A KLF+ L+P+ Y +L N A
Sbjct: 606 DRM-TQRDIVAYNAMIGGYAAH---NLGK-EALKLFDRLQEEGLKPDKVTYINML-NACA 659
Query: 505 NAGRWEDVERTRSL-MKNRRLAKTP-GFSLVELRGKVHAF----LVGDK 547
N+G E + SL +K+ L+ T G +LV K +F LV DK
Sbjct: 660 NSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDK 708
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 193/393 (49%), Gaps = 23/393 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+K C + DL +G++ H+ D + +ALI+MY +CG + +AR++++++ R
Sbjct: 148 LKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTER 207
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+ SW +M+ GYVQ EAL L +E G A+ +LS+C
Sbjct: 208 TVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRAT------------TMRLLSSCK 255
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ H +K +V V N +++ YA+ G + +R+VFD M K V+W
Sbjct: 256 SPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTI 315
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
II YA G + A ++F +M + V N +T VL A + L+ GK +H ++
Sbjct: 316 IIGGYADCGHSEIAFEIFQKM-QQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNA 374
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
E + VGT+++ MY KCG R+ F ++ +++ +W MI G EA +++
Sbjct: 375 GHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIY 434
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVD 435
++M + G+ PN IT+V +L+AC + + HW + H ++ G + ++
Sbjct: 435 HQMQREGMMPNKITYVILLNACVNPTAL----HWGREI-HSRVVKDGFMFDISVQNALIS 489
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ R G +K+A L M V+ D + W +++G
Sbjct: 490 MYARCGSIKDARLLFNKM-VRKDIISWTAMIGG 521
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/633 (39%), Positives = 383/633 (60%), Gaps = 35/633 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +V +WN++++ L R + EA+ F M + T + C L D
Sbjct: 129 MSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLA 188
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H A G +++FV +ALID+Y K G L +A+ +F + R++V+W S+++G
Sbjct: 189 LVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGM--ECRDLVTWNSIISGCE 246
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q AL +F+ V D + + S+ SA ++ + H
Sbjct: 247 QRGQTAAALKMFQGM------------RGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHC 294
Query: 213 FVIKRGFD-SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+V++RG+D ++ GN ++D YA+ +++ ++++FD M +D+V+WN++I Y QNGLA
Sbjct: 295 YVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLAN 354
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA++ + M K +K T +VL A +HLG L+ G +H IK+ L V VGT +
Sbjct: 355 EAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCL 414
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
ID+Y KCG++ A F +M ++ W A+I+G G+H EAL LF +M + G++P++
Sbjct: 415 IDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDH 474
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+TFVS+L+ACSHAGLV +G + + M ++I P +HY CM D+LGRAG+L EA++ I+
Sbjct: 475 VTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQ 534
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M +K D VWG+LLGACRIH NV++G++A++ LFEL+P N GY+VL+SN+YA G+W+
Sbjct: 535 NMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDG 594
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK--EHPQHEKIYEYLEELNVKLQEV 569
V+ RSL++ + L KTPG+S +E++ V+ F G++ HPQHE+I L L K++ V
Sbjct: 595 VDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSV 654
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GYV+D + V+ DV+ +EKE L HSE+LA NLRVCGDCH
Sbjct: 655 GYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNAT 714
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ IS++ +REI+VRDS RFH+FKDG CSCGD+W
Sbjct: 715 KYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/443 (32%), Positives = 225/443 (50%), Gaps = 39/443 (8%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKL-----SLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N++IA +R + AF +R + P TFP I++ + S Q H
Sbjct: 37 NTLIAAFSR---AALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNA---SAAQLH 90
Query: 97 QQAFIFGFHRD-VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
A G R VF S +L+ Y + G +S+A K+FDE+ + R++ +W +ML+G +N
Sbjct: 91 ACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSE--RDVPAWNAMLSGLCRNA 148
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
A EA+ LF + E V D+V ++SVL C + + H + +
Sbjct: 149 RAAEAVGLFGRMVGE------------GVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAV 196
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
K G D E+ V N LID Y + G ++ ++ VF GM +D VTWNSII+ Q G A AL
Sbjct: 197 KHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALK 256
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE-ESVIVGTSIIDM 334
+F M + + V + +TL ++ AIA G R K +H V++ + + +I G +I+DM
Sbjct: 257 MFQGM-RGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDM 315
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK-AGVRPNYIT 393
Y K ++ A++ F+ M ++ SW +I GY + A EA++ + M K G++ T
Sbjct: 316 YAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGT 375
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG--VEHY--GCMVDLLGRAGKLKEAYDL 449
FVSVL A SH G +Q+G H +I+ G V+ Y C++DL + GKL EA L
Sbjct: 376 FVSVLPAYSHLGALQQGMRM-----HALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLL 430
Query: 450 IEGMKVKADFVVWGSLLGACRIH 472
E M ++ W +++ +H
Sbjct: 431 FEKMPRRSTG-PWNAIISGLGVH 452
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/635 (40%), Positives = 372/635 (58%), Gaps = 67/635 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ ++KN VF +N +I VEAL F M + P TFPC +K+CS L
Sbjct: 93 IFDRSLEKNVVF-FNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLD 151
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L G Q H G ++F+ +AL+ MY KCG L +ARK+ D++P R ++VSW SM
Sbjct: 152 NLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYR--DVVSWNSM 209
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY Q+ +AL + KE +S N+ D+ +AS+
Sbjct: 210 VAGYAQSGQFDDALEICKEM------------DSLNLNHDAGTMASL------------- 244
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ + Y +V +F+ M +K+ ++WN +IAIY N
Sbjct: 245 --------------------SPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNN 284
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+ EA+ +F QM + +K +AVT++++L A L L LG+ +H + K +L ++++
Sbjct: 285 SMPNEAVSLFLQM-EECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLL 343
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+++DMY KCG ++ AR F++M+ ++V SWT+M++ YG + +A+ LF KM+ +G
Sbjct: 344 ENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQ 403
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ I FVSVLSACSH GL+ +G H+ M ++ I P +EH+ CMVDL GRAG+++EAY
Sbjct: 404 NPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAY 463
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I+ M ++ + VWG+LL ACR+H +D+G +AA LF+L P GY+VLLSNIYA AG
Sbjct: 464 SFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAG 523
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
W+DV R MK + K PG S VEL G+VH FL GD+ HPQ + IY L+ L K++
Sbjct: 524 MWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMK 583
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E+GY+ S +HDV+ E+KE L IHSEKLA NLRVCGDCH
Sbjct: 584 ELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHI 643
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+LISK+V R I+VRD RFH+F +G+CSCGDYW
Sbjct: 644 AIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 147/307 (47%), Gaps = 26/307 (8%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
L+ AY+ G V+R +FD +EK+ V +N +I Y N L EAL +F Q++ S
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIF-QVMLSCAFNP 135
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+ T VL A + L LR+G +HD ++K+ L+ ++ +G +++ MY KCG + ARK
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
+QM ++V SW +M+AGY + +AL++ +M + + T S+ + L
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSL-- 253
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK---VKADFVVWGSL 465
E +++ M E + + + M+ + EA L M+ +K D V SL
Sbjct: 254 ENVQYIHNM-FERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASL 312
Query: 466 LGAC----------RIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
L AC R+HK ++ G L PN + LL ++YA G E+
Sbjct: 313 LPACGDLSALFLGRRLHKYIEKG--------NLRPNLLLENALL-DMYAKCGCLEEARDV 363
Query: 516 RSLMKNR 522
M+ R
Sbjct: 364 FDKMRLR 370
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 8/168 (4%)
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G+ L K VI L + ++ Y G+ +AR F++ EKNV + MI
Sbjct: 50 GIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMI 109
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM---GHE 420
Y + EAL +F M+ P++ TF VL ACS ++ G + + G +
Sbjct: 110 RSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLD 169
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
N+ G +V + G+ G L+EA +++ M + D V W S++
Sbjct: 170 TNLFIG----NALVAMYGKCGCLREARKVLDQMPYR-DVVSWNSMVAG 212
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 263/663 (39%), Positives = 381/663 (57%), Gaps = 65/663 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSALHDLHS 91
+ N+++WN++I A + ++L F M S P + TFP IK+ S L +L +
Sbjct: 95 IPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFT 154
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
GK H DVF+ ++LI Y+KCGEL ++F IP+R ++VSW SM+T +
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRR--DVVSWNSMITAF 212
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
VQ EAL LF+E + NV + + + VLSAC++ + H
Sbjct: 213 VQGGCPEEALELFQEM------------ETQNVKPNGITMVGVLSACAKKSDFEFGRWVH 260
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW-------------- 257
++ + + + N ++D Y + G V+ ++++FD M EKD V+W
Sbjct: 261 SYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYD 320
Query: 258 -----------------NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
N++I+ Y Q G EAL++F ++ S K + VTL + L A
Sbjct: 321 AAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSAC 380
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
A LG + LG IH + K ++ + + TS+IDMYCKCG + A F+ ++ K+V W+
Sbjct: 381 AQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWS 440
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
AMIAG MH ++A+ LF KM + V+PN +TF ++L ACSH GLV+EG + N M
Sbjct: 441 AMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELV 500
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
+ + PGV+HY CMVD+LGRAG L+EA +LIE M + VWG+LLGAC IH+NV L E
Sbjct: 501 YGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQ 560
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
A +L ELEP N G +VLLSNIYA AG+W+ V R LM++ L K PG S +E+ G VH
Sbjct: 561 ACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVH 620
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE-KEMTLRIHSEKLA 599
FLVGD HP +KIY L+E+ +L+ +GYV + + ++ V++E+ KE L +HSEKLA
Sbjct: 621 EFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLA 680
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLRVCGDCH+V +L+SK+ DREI++RD RFH+F++G CSC
Sbjct: 681 IAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCM 740
Query: 642 DYW 644
DYW
Sbjct: 741 DYW 743
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 171/360 (47%), Gaps = 19/360 (5%)
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH- 238
N+D F + + S++ CS + H +++ G + + LI A A
Sbjct: 28 NNDRYFANHPTL-SLIDQCSETKQ---LKQIHAQMLRTGLFFDPFSASRLITAAALSPFP 83
Query: 239 -VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
+D +++VFD + + TWN++I YA + ++L +F +M+ + + T ++
Sbjct: 84 SLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLI 143
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A + L L GK H VIK+ L V + S+I Y KCG++ L + F + ++V
Sbjct: 144 KAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVV 203
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SW +MI + EAL+LF +M V+PN IT V VLSAC+ + G W+++
Sbjct: 204 SWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFG-RWVHSY 262
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL-GACRIHKNVD 476
I + M+D+ + G +++A L + M K D V W ++L G +I
Sbjct: 263 IERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEK-DIVSWTTMLVGYAKI----- 316
Query: 477 LGEI-AAKKLFELEPNN--CGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
GE AA+ +F+ PN ++ L+S Y G+ ++ ++ + AK +LV
Sbjct: 317 -GEYDAAQGIFDAMPNQDIAAWNALIS-AYEQCGKPKEALELFHELQLSKTAKPDEVTLV 374
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/629 (38%), Positives = 379/629 (60%), Gaps = 33/629 (5%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D+ NV WN ++ + D ++ F M+ + P + T+PC +++C+ + G+
Sbjct: 307 DRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGE 366
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H + GF D++VS LIDMYSK G L ARK+ + + +R ++VSWTSM+ GYVQ
Sbjct: 367 QIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKR--DVVSWTSMIAGYVQ 424
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+D EAL FKE +CG V+ D++ +AS SAC+ + H
Sbjct: 425 HDFCEEALATFKEM----QDCG--------VWPDNIGLASAASACAGIKAMRQGLQIHAR 472
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V G+ +++ + NTL++ YAR G + + +F + KD +TWN +I+ + Q+ L +A
Sbjct: 473 VYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQA 532
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L VF +M ++ K N T + + A+A+L ++ GK +H + +K V ++I
Sbjct: 533 LMVFMKMGQA-GAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALIS 591
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
+Y KCG ++ A+ F++M +N SW +I H R EALDLF +M + G++PN +T
Sbjct: 592 LYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVT 651
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
F+ VL+ACSH GLV+EG + +M + + + P +HY C+VD+LGRAG+L A ++ M
Sbjct: 652 FIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEM 711
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
+ A+ ++W +LL AC++HKN+++GE+AAK L ELEP++ +VLLSN YA G+W + +
Sbjct: 712 PITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRD 771
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
+ R +MK+R + K PG S +E++ VHAF VGD+ HP ++IY++L ELN +L ++GY
Sbjct: 772 QVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQ 831
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
+ ++ H+ +QE+K+ T +HSEKLA NLRVC DCH+ ++ S
Sbjct: 832 ENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKCTS 891
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+V REIV+RD RFH+F G CSCGDYW
Sbjct: 892 EVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 204/410 (49%), Gaps = 33/410 (8%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
+ H + + G D + + LID+Y+K G + AR++F E+ R + VSW +ML+GY Q
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR--DHVSWVAMLSGYAQ 121
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+ +EA L+ + + V ++SVLSAC++ + H
Sbjct: 122 SGLGKEAFRLYSQM------------HWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQ 169
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V K+ F SE VGN LI Y G ++ +VF M+ D VT+N++I+ +AQ G A
Sbjct: 170 VYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECA 229
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L +FD+M + + ++ + VT++++L A A +G L+ GK +H ++K + I S++D
Sbjct: 230 LQIFDEM-QLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
+Y KCG ++ A FN NV W M+ YG ++ ++F +M G+ PN T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFT 348
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDL 449
+ +L C+ G ++ L H +I+ G E G ++D+ + G L +A +
Sbjct: 349 YPCILRTCTCTGQIE-----LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKI 403
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE-----PNNCG 494
+E M K D V W S++ H D E A E++ P+N G
Sbjct: 404 LE-MLEKRDVVSWTSMIAGYVQH---DFCEEALATFKEMQDCGVWPDNIG 449
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 224/464 (48%), Gaps = 26/464 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F + +++V SW ++++ A+ G EA R +S M ++ PT + +C+
Sbjct: 100 VFKELSSRDHV-SWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGK 158
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H Q + F + FV +ALI +Y G A ++F ++ R V++ ++
Sbjct: 159 LFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDR--VTFNTL 216
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G+ Q + AL +F E L + D V +AS+L+AC+ V
Sbjct: 217 ISGHAQCGHGECALQIFDEMQL------------SGLRPDCVTVASLLAACASVGDLQKG 264
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H +++K G + +L+D Y + G ++ + +F+ + V WN ++ Y Q
Sbjct: 265 KQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQI 324
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
A++ ++F QM ++T + N T +L G + LG+ IH IK E + V
Sbjct: 325 SDLAKSFEIFGQM-QATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYV 383
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+IDMY K G +D ARK +++++V SWT+MIAGY H EAL F +M GV
Sbjct: 384 SGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGV 443
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ I S SAC+ +++G ++ + + + +V+L R G+ +EA+
Sbjct: 444 WPDNIGLASAASACAGIKAMRQGLQ-IHARVYVSGYAADISIWNTLVNLYARCGRSEEAF 502
Query: 448 DLIEGMKVKADFVVWGSLL---GACRIHKN-----VDLGEIAAK 483
L ++ K D + W L+ G R++K + +G+ AK
Sbjct: 503 SLFREIEHK-DEITWNGLISGFGQSRLYKQALMVFMKMGQAGAK 545
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 216/437 (49%), Gaps = 25/437 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
++N++I+ A+ G AL+ F M+ L P T + +C+++ DL GKQ H
Sbjct: 212 TFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYL 271
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G D +L+D+Y KCG++ A +F+ + R N+V W ML Y Q + +
Sbjct: 272 LKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN-LGDRT-NVVLWNLMLVAYGQISDLAK 329
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
+ +F + + + + +L C+ + E H IK GF
Sbjct: 330 SFEIFGQM------------QATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGF 377
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+S++ V LID Y++ G +D +RK+ + + ++D V+W S+IA Y Q+ EAL F +
Sbjct: 378 ESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKE 437
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M + V + + L++ A A + +R G IH +V + + +++++Y +CG
Sbjct: 438 M-QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCG 496
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+ + A F +++ K+ +W +I+G+G ++AL +F KM +AG + N TF+S +S
Sbjct: 497 RSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAIS 556
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
A ++ +++G H ++ G E ++ L G+ G +++A + M +
Sbjct: 557 ALANLADIKQG-----KQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSL 611
Query: 456 KADFVVWGSLLGACRIH 472
+ + V W +++ +C H
Sbjct: 612 RNE-VSWNTIITSCSQH 627
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 169/339 (49%), Gaps = 17/339 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++K +V SW S+IA + EAL F M+ + P A +C+ + + G
Sbjct: 407 LEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG 466
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H + ++ G+ D+ + + L+++Y++CG +A LF EI ++ ++W +++G+
Sbjct: 467 LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEH--KDEITWNGLISGFG 524
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+ ++AL++F + G + NVF S +SA + + + HG
Sbjct: 525 QSRLYKQALMVFMKM--------GQAGAKYNVFT----FISAISALANLADIKQGKQVHG 572
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+K G SE V N LI Y + G ++ ++ +F M ++ V+WN+II +Q+G E
Sbjct: 573 RAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLE 632
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSI 331
ALD+FDQM K +K N VT VL A +H+G++ G + + L +
Sbjct: 633 ALDLFDQM-KQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACV 691
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+D+ + GQ+D AR+ ++M N W +++ +H
Sbjct: 692 VDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVH 730
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/626 (41%), Positives = 376/626 (60%), Gaps = 32/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SW ++A A ++L F MR + P T A+KSC+ L GK H
Sbjct: 169 DMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVH 228
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A + RD++V AL+++Y+K GE+++A++ F+E+P+ +++ W+ M++ Y Q+D
Sbjct: 229 GCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKD--DLIPWSLMISRYAQSDK 286
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
++EAL LF S V ++ ASVL AC+ + + + H V+K
Sbjct: 287 SKEALELFCRM-----------RQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLK 335
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G DS V V N L+D YA+ G ++ S K+F G EK+ V WN+II Y Q G +AL++
Sbjct: 336 VGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNL 395
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F M+ D++ VT S+VL A A L L G+ IH IK + +V S+IDMY
Sbjct: 396 FSNML-GLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYA 454
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG++D AR F++M +++ SW A+I GY +H EAL+LF M ++ +PN +TFV
Sbjct: 455 KCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVG 514
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VLSACS+AGL+ +G +M ++ IEP +EHY CMV LLGR+G+ EA LI + +
Sbjct: 515 VLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQ 574
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
+VW +LLGAC IHKN+DLG++ A+++ E+EP + HVLLSN+YA A RW++V R
Sbjct: 575 PSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVR 634
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
MK +++ K PG S VE +G VH F VGD HP + I+ LE L K ++ GYV D +
Sbjct: 635 KNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCS 694
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V+ DV+ +EKE L +HSE+LA NLR+C DCH VI+L+SK+V
Sbjct: 695 VVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIV 754
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
REIV+RD RFH+F+ G+CSCGDYW
Sbjct: 755 QREIVIRDINRFHHFRQGVCSCGDYW 780
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 223/420 (53%), Gaps = 31/420 (7%)
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H + G D FV +ALID YS CG + AR++FD I +++VSWT M+ Y +N
Sbjct: 127 HAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGI--YFKDMVSWTGMVACYAENY 184
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
++LLLF + + G N + I++ L +C+ + V + HG +
Sbjct: 185 CHEDSLLLFCQMRIM-----GYRPN-------NFTISAALKSCNGLEAFKVGKSVHGCAL 232
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
K +D ++ VG L++ Y + G + +++ F+ M + D + W+ +I+ YAQ+ + EAL+
Sbjct: 233 KVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALE 292
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F +M +S+ V N T ++VL A A L +L LG IH V+K+ L+ +V V +++D+Y
Sbjct: 293 LFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVY 352
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG+++ + K F EKN +W +I GY +AL+LF M+ ++P +T+
Sbjct: 353 AKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYS 412
Query: 396 SVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
SVL A + ++ G H L T+ +N + V + ++D+ + G++ +A + M
Sbjct: 413 SVLRASASLVALEPGRQIHSL-TIKTMYNKDSVVAN--SLIDMYAKCGRIDDARLTFDKM 469
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL------EPNNCGYHVLLSNIYANAG 507
K D V W +L+ IH LG + A LF++ +PN + +LS +NAG
Sbjct: 470 D-KQDEVSWNALICGYSIH---GLG-MEALNLFDMMQQSNSKPNKLTFVGVLSAC-SNAG 523
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 197/380 (51%), Gaps = 18/380 (4%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D ++GK H G D+F + L++ Y G L DA KLFDE+P + N VS+ ++
Sbjct: 18 DPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMP--LTNTVSFVTL 75
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
G+ ++ + A L E E V+ ++L + +
Sbjct: 76 AQGFSRSHQFQRARRLLLRLFREGYE------------VNQFVFTTLLKLLVSMDLADTC 123
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H +V K G ++ VG LIDAY+ G+VD +R+VFDG+ KD V+W ++A YA+N
Sbjct: 124 LSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAEN 183
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
++L +F QM + + N T+SA L + L ++GK +H +K+ + + V
Sbjct: 184 YCHEDSLLLFCQM-RIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYV 242
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG- 386
G +++++Y K G++ A++ F +M + ++ W+ MI+ Y +++EAL+LF +M ++
Sbjct: 243 GIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSV 302
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
V PN TF SVL AC+ L+ G + +++ + ++ V ++D+ + G+++ +
Sbjct: 303 VVPNNFTFASVLQACASLVLLNLG-NQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENS 361
Query: 447 YDLIEGMKVKADFVVWGSLL 466
L G K + V W +++
Sbjct: 362 VKLFTGSTEKNE-VAWNTII 380
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 187/353 (52%), Gaps = 22/353 (6%)
Query: 29 FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALH 87
F + + K+++ W+ +I+ A+ S EAL F MR+ S + P TF +++C++L
Sbjct: 262 FFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLV 321
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L+ G Q H G +VFVS+AL+D+Y+KCGE+ ++ KLF + +N V+W ++
Sbjct: 322 LLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTE--KNEVAWNTI 379
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GYVQ + +AL LF L ++ V +SVL A + +
Sbjct: 380 IVGYVQLGDGEKALNLFSNML------------GLDIQPTEVTYSSVLRASASLVALEPG 427
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H IK ++ + V N+LID YA+ G +D +R FD M ++D V+WN++I Y+ +
Sbjct: 428 RQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIH 487
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVI 326
GL EAL++FD M++ ++ K N +T VL A ++ G+L G+ +++ +E +
Sbjct: 488 GLGMEALNLFD-MMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIE 546
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
T ++ + + GQ D A K ++ + +V W A++ C + LDL
Sbjct: 547 HYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGA----CVIHKNLDL 595
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 15/176 (8%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N LF +KN V +WN++I + GD +AL FS+M L + PT T+ +++
Sbjct: 360 NSVKLFTGSTEKNEV-AWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRAS 418
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
++L L G+Q H +++D V+++LIDMY+KCG + DAR FD++ + ++ VS
Sbjct: 419 ASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDK--QDEVS 476
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
W +++ GY + EAL LF ++++S N + + VLSACS
Sbjct: 477 WNALICGYSIHGLGMEALNLFD--MMQQS----------NSKPNKLTFVGVLSACS 520
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 133/284 (46%), Gaps = 9/284 (3%)
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+DS + A++L R + H ++K G ++ N L++ Y G ++ + K+
Sbjct: 1 MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD M + V++ ++ ++++ + + + N + +L + + +
Sbjct: 61 FDEMPLTNTVSFVTLAQGFSRSH-QFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDL 119
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
+H V K+ + VGT++ID Y CG VD AR+ F+ + K++ SWT M+A
Sbjct: 120 ADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVAC 179
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS--HAGLVQEGWHWLN-TMGHEFN 422
Y + ++L LF +M G RPN T + L +C+ A V + H + ++ +
Sbjct: 180 YAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRD 239
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ G+ +++L ++G++ EA E M K D + W ++
Sbjct: 240 LYVGIA----LLELYTKSGEIAEAQQFFEEMP-KDDLIPWSLMI 278
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/663 (38%), Positives = 385/663 (58%), Gaps = 66/663 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ WN++ A D V AL + M L L P TFP +KSC+ G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 122
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR------------------------ 128
+Q H G+ D++V ++LI MY + G L DAR
Sbjct: 123 QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASK 182
Query: 129 -------KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
K+FDEIP I+++VSW +M++GY + N +EAL LFKE +
Sbjct: 183 GYIASAQKMFDEIP--IKDVVSWNAMISGYAETGNNKEALELFKEMM------------K 228
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
NV D + SV+SAC++ + H ++ GF S + + N LID Y + G V+
Sbjct: 229 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ +F+G+ KD ++WN++I Y L EAL +F +M++S + N VT+ ++L A A
Sbjct: 289 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESP-NDVTMLSILPACA 347
Query: 302 HLGVLRLGKCIHDQVIKM--DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
HLG + +G+ IH + K + + TS+IDMY KCG ++ A++ F+ + +++ SW
Sbjct: 348 HLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSW 407
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
AMI G+ MH RA A D+F +M K + P+ ITFV +LSACSH+G++ G H +M
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKE 467
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
++ I P +EHYGCM+DLLG +G KEA ++I M+++ D V+W SLL AC+++ NV+LGE
Sbjct: 468 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGE 527
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
A+ L ++EP N G +VLLSNIYA AGRW +V + R+L+ ++ + K PG S +E+ V
Sbjct: 528 SYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVV 587
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
H F++GDK HP++ +IY LEE+ V L+E G+V D + V+ ++++E KE LR HSEKLA
Sbjct: 588 HEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 647
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLRVC +CH +LISK+ REI+ RD RFH+F+DG+CSC
Sbjct: 648 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 707
Query: 642 DYW 644
DYW
Sbjct: 708 DYW 710
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 28/278 (10%)
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD---LARKAFNQMKEKNVRSWTAMIAGY 366
+ IH Q+IK L + + +I+ D A F ++E N+ W M G+
Sbjct: 19 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 78
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ AL L+ MI G+ PN TF +L +C+ + +EG GH +
Sbjct: 79 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQ---IHGHVLKLGYD 135
Query: 427 VEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA-AK 483
++ Y ++ + + G+L++A + + + D V + +L I G IA A+
Sbjct: 136 LDLYVHTSLISMYVQNGRLEDARKVFDQSSHR-DVVSYTAL-----ITGYASKGYIASAQ 189
Query: 484 KLFELEP--NNCGYHVLLSNIYANAGRWEDVERTRSLMK-NRRLAKTPGFSLV------- 533
K+F+ P + ++ ++S E +E + +MK N R ++ S+V
Sbjct: 190 KMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSA 249
Query: 534 --ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
EL +VH++ + D + KI L +L +K EV
Sbjct: 250 SIELGRQVHSW-IDDHGFGSNLKIVNALIDLYIKCGEV 286
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 282/675 (41%), Positives = 393/675 (58%), Gaps = 61/675 (9%)
Query: 28 LFNKYVDKN--NVFSWNSVIADLARGGDSVEALRAFSSM---RKLSLTPTRSTFPCAIKS 82
+F++ +++ ++ SWNS++A +GG S ALR M L L P T + +
Sbjct: 184 MFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPA 243
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
C+++ L GKQ H + G DVFV +AL+ MY+KC ++++A K+F+ I ++ ++V
Sbjct: 244 CASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKK--DVV 301
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEE---------------SECGGASENSDNVF-- 185
SW +M+TGY Q + AL LFK E+ ++ G E D VF
Sbjct: 302 SWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALD-VFRQ 360
Query: 186 -------VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF-------DSEVGVGNTLID 231
+ V +AS+LS C+ V + H +VIK + ++ V N LID
Sbjct: 361 MQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLID 420
Query: 232 AYARGGHVDVSRKVFDGMIEKD--AVTWNSIIAIYAQNGLAAEALDVFDQMVKS-TDVKC 288
YA+ V+R +FD + KD VTW +I YAQ+G A +AL +F Q+ K T +K
Sbjct: 421 MYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKP 480
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI-VGTSIIDMYCKCGQVDLARKA 347
NA TLS L+A A LG LRLG+ +H ++ + E V+ VG +IDMY K G +D AR
Sbjct: 481 NAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAV 540
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F+ MK +NV SWT+++ GYGMH R EAL LF +M K G + ITF+ VL ACSH+G+V
Sbjct: 541 FDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMV 600
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+G + + M F I PG EHY CMVDLLGRAG+L EA +LI+ M ++ VVW +LL
Sbjct: 601 DQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLS 660
Query: 468 ACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKT 527
A RIH N++LGE AA KL EL N G + LLSN+YANA RW+DV R RSLMK+ + K
Sbjct: 661 ASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKR 720
Query: 528 PGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEK 587
PG S ++ + F VGD+ HP+ E+IY L +L +++++GYV + +HDVD EEK
Sbjct: 721 PGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEK 780
Query: 588 EMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
L HSEKLA NLR+CGDCH+ + IS ++D EIV+RDS R
Sbjct: 781 GDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSR 840
Query: 630 FHYFKDGLCSCGDYW 644
FH+FK G CSC YW
Sbjct: 841 FHHFKKGSCSCRSYW 855
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 241/486 (49%), Gaps = 62/486 (12%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
+ VF WN++I + G + L + M++L P TFP +K+C + L G
Sbjct: 90 STVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASV 149
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR-IRNIVSWTSMLTGYVQN 154
H G +VF+ ++++ MY +CG L DA ++FDE+ +R I +IVSW S+L YVQ
Sbjct: 150 HAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQG 209
Query: 155 DNAREAL-LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+R AL + F+ + S + D++ + ++L AC+ V + HGF
Sbjct: 210 GQSRTALRIAFRM----------GNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGF 259
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN--------------- 258
++ G +V VGN L+ YA+ ++ + KVF+G+ +KD V+WN
Sbjct: 260 SVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSA 319
Query: 259 --------------------SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
++IA YAQ G EALDVF QM + ++ N VTL+++L
Sbjct: 320 LSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM-QLYGLEPNVVTLASLLS 378
Query: 299 AIAHLGVLRLGKCIHDQVIK-------MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
A +G L GK H VIK D E+ ++V +IDMY KC +AR F+ +
Sbjct: 379 GCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSI 438
Query: 352 --KEKNVRSWTAMIAGYGMHCRAREALDLFYKMI--KAGVRPNYITFVSVLSACSHAGLV 407
K+KNV +WT MI GY H A +AL LF ++ K ++PN T L AC+ G +
Sbjct: 439 EGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGEL 498
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYG-CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ G L+ E V + G C++D+ ++G + A + + MK++ + V W SL+
Sbjct: 499 RLG-RQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLR-NVVSWTSLM 556
Query: 467 GACRIH 472
+H
Sbjct: 557 TGYGMH 562
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 168/382 (43%), Gaps = 58/382 (15%)
Query: 72 TRSTFPCAIKSCSALHD---LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
T +T P I S L L + K AHQQ F+ GF ++F S + Y +CG ++A
Sbjct: 23 TFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGF-TEMF--SYAVGAYIECGASAEAV 79
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
L + + W +++ V K LL+++ D
Sbjct: 80 SLLQRLIPSHSTVFWWNALIRRSV------------KLGLLDDTLGFYCQMQRLGWLPDH 127
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
VL AC + H V G S V + N+++ Y R G +D + ++FD
Sbjct: 128 YTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDE 187
Query: 249 MIEK---DAVTWNSIIAIYAQNGLAAEALDVFDQMVK--STDVKCNAVTLSAVLLAIAHL 303
++E+ D V+WNSI+A Y Q G + AL + +M S ++ +A+TL +L A A +
Sbjct: 188 VLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASV 247
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM- 362
L+ GK +H ++ L + V VG +++ MY KC +++ A K F +K+K+V SW AM
Sbjct: 248 FALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMV 307
Query: 363 ----------------------------------IAGYGMHCRAREALDLFYKMIKAGVR 388
IAGY EALD+F +M G+
Sbjct: 308 TGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLE 367
Query: 389 PNYITFVSVLSACSHAGLVQEG 410
PN +T S+LS C+ G + G
Sbjct: 368 PNVVTLASLLSGCASVGALLYG 389
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 255/653 (39%), Positives = 382/653 (58%), Gaps = 52/653 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LFN +W+S+I + +F+SMR LS+ P R FP +K+ + L
Sbjct: 65 LFNSLPSPPPPLAWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLK 124
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR---------- 137
H G D+++++ALI+ Y+K +A K+FD P+R
Sbjct: 125 HHKLAHSLHACTVRLGLDSDLYIANALINTYAK---FHNAGKVFDVFPKRGESGIDCVKK 181
Query: 138 ------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAI 191
+R++VSW +++ G+ QN EAL + +E + + DS +
Sbjct: 182 VFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREM-----------GKNGKLKPDSFTL 230
Query: 192 ASVLSA-CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+S+L V VN E HG+ ++ GFD +V +G++LID YA+ ++ S + F +
Sbjct: 231 SSILPIFAEHVDVNKGKE-IHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILP 289
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
KDA++WNSIIA QNG L F +M+K +VK AV+ S+V+ A AHL L LG+
Sbjct: 290 RKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKE-NVKPMAVSFSSVIPACAHLTALSLGR 348
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
+H ++++ +++ + +S++DMY KCG + +AR F+++ ++++ +WTA+I G MH
Sbjct: 349 QLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHG 408
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
A +A+ LF M++ GVRP Y+ F++VL+ACSHAGLV EGW + N+M +F I PG+EHY
Sbjct: 409 HALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHY 468
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMK-VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
+ DLLGRAG+L+EAYD I M+ V+ VW LL ACR HK+V+L E KL ++
Sbjct: 469 AAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVD 528
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
N G +VL+SNIY+ A RW+D R R M+ + L KTP S +E+ +VH F+ GDK H
Sbjct: 529 SENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSH 588
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
P ++KI + L+ L ++++ GYV D V+HDVD+E K L HSE+LA
Sbjct: 589 PYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTA 648
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
N+RVC DCHT I+ I+K+V REI VRD+ RFH+FK+G CSCGDYW
Sbjct: 649 GTTIRVIKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/636 (39%), Positives = 376/636 (59%), Gaps = 34/636 (5%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++FN ++DK ++N +I LA AL F M + S+ + TF +K+CS +
Sbjct: 76 SIFN-HIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRM 134
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G+Q H GF + FV + LI MY+ CG++ AR +FD +P+R +IV+W S
Sbjct: 135 KALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPER--SIVAWNS 192
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
ML+GY +N E + LF++ L E D V + SVL AC R+ +
Sbjct: 193 MLSGYTKNGLWDEVVKLFRKILELRIE------------FDDVTMISVLMACGRLANLEI 240
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
E +++ +G + +LID YA+ G VD +RK+FD M ++D V W+++I+ YAQ
Sbjct: 241 GELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQ 300
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
EAL++F +M K +V N VT+ +VL + A LG GK +H + K ++ +V
Sbjct: 301 ADRCKEALNLFHEMQKG-NVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVT 359
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
+GT +ID Y KCG +D + + F +M KNV +WTA+I G + + AL+ F M++
Sbjct: 360 LGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLEND 419
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
V+PN +TF+ VLSACSHA LV +G H N+M +F+IEP +EHYGCMVD+LGRAG L+EA
Sbjct: 420 VKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEA 479
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
Y I+ M + VVW +LL +CR HKN+++ E + + + LEP + G ++LLSN YA
Sbjct: 480 YQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALV 539
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
GR ED R RSL+K + + K PG SL+EL G VH F D EH ++I++ L+++ ++
Sbjct: 540 GRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQI 599
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+ +GYV + + ++E KE ++ HSEKLA NLR+C DCH
Sbjct: 600 KRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCH 659
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ IS+V +R I+VRD RFH+FKDGLCSC DYW
Sbjct: 660 NATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+D A FN + + ++ MI G AL LF KM + V+ + TF SVL A
Sbjct: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130
Query: 401 CSHAGLVQEGW--HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
CS ++EG H L + F VE+ ++ + G++ A + +GM ++
Sbjct: 131 CSRMKALREGEQVHAL-ILKSGFKSNEFVEN--TLIQMYANCGQIGVARHVFDGMPERS- 186
Query: 459 FVVWGSLLGA 468
V W S+L
Sbjct: 187 IVAWNSMLSG 196
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/630 (40%), Positives = 373/630 (59%), Gaps = 66/630 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K NV +N +I +AL F +M + P T+PC +K+ S DL G
Sbjct: 97 IPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVG 156
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H G +VFV + LI MY KCG L +A ++ D++P R++VSW S++ G
Sbjct: 157 MQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMP--CRDVVSWNSLVAGCA 214
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+N +AL + KE L + D+ +AS+L A
Sbjct: 215 RNGQFDDALEVCKEMELL------------GLKPDAGTMASLLPA--------------- 247
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V NT +D +V +++F + K V+WN +IA+Y N + AE
Sbjct: 248 ------------VTNTCLD------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAE 289
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+D+F QM + V +A+++++VL A L L LG+ IH+ V++ L+ ++++ ++I
Sbjct: 290 AVDIFLQM-EDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALI 348
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG ++ AR+ F+QMK ++V SWT+MI+ YGM+ + R+A+ LF +M G+ P+ I
Sbjct: 349 DMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSI 408
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
FVSVLSACSHAGL+ EG ++ M E I P +EH+ CMVDLLGRAG++ EAY I+
Sbjct: 409 AFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQ 468
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M ++ + VWG+LL ACR++ N+ +G +AA +LF+L P GY+VLLSNIYA AGRWEDV
Sbjct: 469 MPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDV 528
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
RS+MK + + K PG S EL +VH FL GD+ HPQ ++IYE L+ K++E GYV
Sbjct: 529 TTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYV 588
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
+ S +HDV++E+KE L +HSEKLA NLRVCGDCH +LI
Sbjct: 589 PETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLI 648
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+V REI +RD+ RFH+F +G+CSCGDYW
Sbjct: 649 SKIVGREITIRDTNRFHHFYNGVCSCGDYW 678
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 174/386 (45%), Gaps = 59/386 (15%)
Query: 88 DLHSGKQAHQQAFI-FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D+ K+ H + I H + + L+ Y+ CGE R +FDEIP+ +N+V +
Sbjct: 50 DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPK--KNVVFFNV 107
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ YV N +ALL+FK A D D VL A S V
Sbjct: 108 MIRSYVNNHLYSDALLVFKNM---------AGHGIDP---DHYTYPCVLKASSGSEDLWV 155
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H V++ G D V VGN LI Y + G + + +V D M +D V+WNS++A A+
Sbjct: 156 GMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCAR 215
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG +AL+V +M + +K +A T++++L A+ + C+ +
Sbjct: 216 NGQFDDALEVCKEM-ELLGLKPDAGTMASLLPAVTN-------TCLDN------------ 255
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V ++ F ++ K++ SW MIA Y + EA+D+F +M
Sbjct: 256 --------------VSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHA 301
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF----NIEPGVEHYGCMVDLLGRAGK 442
V P+ I+ SVL AC + G HE+ ++P + ++D+ + G
Sbjct: 302 VDPDAISIASVLPACGDLSALLLGRRI-----HEYVVRKRLQPNLLLENALIDMYAKCGC 356
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGA 468
L+ A ++ + MK + D V W S++ A
Sbjct: 357 LEYAREVFDQMKFR-DVVSWTSMISA 381
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 148/315 (46%), Gaps = 14/315 (4%)
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
I S +G L+ AYA G +R +FD + +K+ V +N +I Y N L ++AL
Sbjct: 63 IDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDAL 122
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
VF M + + T VL A + L +G IH V+++ L+ +V VG +I M
Sbjct: 123 LVFKNMA-GHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISM 181
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y KCG + A + +QM ++V SW +++AG + + +AL++ +M G++P+ T
Sbjct: 182 YGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTM 241
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL---IE 451
S+L A ++ L + ++ M + + V + M+ + EA D+ +E
Sbjct: 242 ASLLPAVTNTCL--DNVSFVKEMFMKLANKSLVS-WNVMIAVYMNNSMPAEAVDIFLQME 298
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLG----EIAAKKLFELEPNNCGYHVLLSNIYANAG 507
V D + S+L AC + LG E +K L+PN + L+ ++YA G
Sbjct: 299 DHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRK--RLQPNLLLENALI-DMYAKCG 355
Query: 508 RWEDVERTRSLMKNR 522
E MK R
Sbjct: 356 CLEYAREVFDQMKFR 370
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 310 KCIHDQV-IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
K +H ++ I DL + +G ++ Y CG+ R F+++ +KNV + MI Y
Sbjct: 55 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 114
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGWHWLNTM 417
+ +AL +F M G+ P++ T+ VL A S HA +V+ +
Sbjct: 115 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVR--------V 166
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G + N+ G ++ + G+ G L EA +++ M + D V W SL+ C
Sbjct: 167 GLDLNVFVG----NGLISMYGKCGCLVEACRVLDQMPCR-DVVSWNSLVAGC 213
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/629 (38%), Positives = 378/629 (60%), Gaps = 33/629 (5%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D+ NV WN ++ + D ++ F M+ + P + T+PC +++C+ + G+
Sbjct: 307 DRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGE 366
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H + GF D++VS LIDMYSK L ARK+ + + +R ++VSWTSM+ GYVQ
Sbjct: 367 QIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKR--DVVSWTSMIAGYVQ 424
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+D EAL FKE +CG V+ D++ +AS SAC+ + H
Sbjct: 425 HDFCEEALATFKEM----QDCG--------VWPDNIGLASAASACAGIKAMRQGLQIHAR 472
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V G+ +++ + NTL++ YAR G + + +F + KD +TWN +I+ + Q+ L +A
Sbjct: 473 VYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQA 532
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L VF +M ++ K N T + + A+A+L ++ GK +H + +K V ++I
Sbjct: 533 LMVFMKMSQA-GAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALIS 591
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
+Y KCG ++ A+ F++M +N SW +I H R EALDLF +M + G++PN +T
Sbjct: 592 LYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVT 651
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
F+ VL+ACSH GLV+EG + +M + + + P +HY C+VD+LGRAG+L A ++ M
Sbjct: 652 FIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEM 711
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
+ A+ ++W +LL AC++HKN+++GE+AAK L ELEP++ +VLLSN YA G+W + +
Sbjct: 712 PITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRD 771
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
+ R +MK+R + K PG S +E++ VHAF VGD+ HP ++IY++L ELN +L ++GY
Sbjct: 772 QVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQ 831
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
+ ++ H+ +QE+K+ T +HSEKLA NLRVC DCH+ ++ S
Sbjct: 832 ENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTS 891
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+V REIV+RD RFH+F G CSCGDYW
Sbjct: 892 EVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 202/410 (49%), Gaps = 33/410 (8%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
+ H + + G D + + LID+Y+K G + AR++F E+ R + VSW +ML+GY Q
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR--DHVSWVAMLSGYAQ 121
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+EA L+ + + V ++SVLSAC++ + H
Sbjct: 122 RGLGKEAFRLYSQM------------HWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQ 169
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V K+ F SE VGN LI Y G ++ +VF M+ D VT+N++I+ +AQ G A
Sbjct: 170 VYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECA 229
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L +FD+M + + ++ + VT++++L A A +G L+ GK +H ++K + I S++D
Sbjct: 230 LQIFDEM-QLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
+Y KCG ++ A FN NV W M+ YG ++ ++F +M G+ PN T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFT 348
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDL 449
+ +L C+ G ++ L H +I+ G E G ++D+ + L +A +
Sbjct: 349 YPCILRTCTCTGQIE-----LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKI 403
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE-----PNNCG 494
+E M K D V W S++ H D E A E++ P+N G
Sbjct: 404 LE-MLEKRDVVSWTSMIAGYVQH---DFCEEALATFKEMQDCGVWPDNIG 449
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 213/437 (48%), Gaps = 25/437 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
++N++I+ A+ G AL+ F M+ L P T + +C+++ DL GKQ H
Sbjct: 212 TFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYL 271
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G D +L+D+Y KCG++ A +F+ + R N+V W ML Y Q + +
Sbjct: 272 LKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN-LGDRT-NVVLWNLMLVAYGQISDLAK 329
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
+ +F + + + + +L C+ + E H IK GF
Sbjct: 330 SFEIFGQM------------QATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGF 377
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+S++ V LID Y++ +D +RK+ + + ++D V+W S+IA Y Q+ EAL F +
Sbjct: 378 ESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKE 437
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M + V + + L++ A A + +R G IH +V + + +++++Y +CG
Sbjct: 438 M-QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCG 496
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+ + A F ++ K+ +W +I+G+G +AL +F KM +AG + N TF+S +S
Sbjct: 497 RSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAIS 556
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
A ++ +++G H ++ G E ++ L G+ G +++A + M +
Sbjct: 557 ALANLADIKQG-----KQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSL 611
Query: 456 KADFVVWGSLLGACRIH 472
+ + V W +++ +C H
Sbjct: 612 RNE-VSWNTIITSCSQH 627
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 216/450 (48%), Gaps = 21/450 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F + +++V SW ++++ A+ G EA R +S M ++ PT + +C+
Sbjct: 100 VFKELSSRDHV-SWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGK 158
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H Q + F + FV +ALI +Y G A ++F ++ R V++ ++
Sbjct: 159 LFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDR--VTFNTL 216
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G+ Q + AL +F E L + D V +AS+L+AC+ V
Sbjct: 217 ISGHAQCGHGECALQIFDEMQL------------SGLRPDCVTVASLLAACASVGDLQKG 264
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H +++K G + +L+D Y + G ++ + +F+ + V WN ++ Y Q
Sbjct: 265 KQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQI 324
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
A++ ++F QM ++T + N T +L G + LG+ IH IK E + V
Sbjct: 325 SDLAKSFEIFGQM-QATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYV 383
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+IDMY K +D ARK +++++V SWT+MIAGY H EAL F +M GV
Sbjct: 384 SGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGV 443
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ I S SAC+ +++G ++ + + + +V+L R G+ +EA+
Sbjct: 444 WPDNIGLASAASACAGIKAMRQGLQ-IHARVYVSGYAADISIWNTLVNLYARCGRSEEAF 502
Query: 448 DLIEGMKVKADFVVWGSLL---GACRIHKN 474
L + K D + W L+ G R+++
Sbjct: 503 SLFREIDHK-DEITWNGLISGFGQSRLYEQ 531
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 170/339 (50%), Gaps = 17/339 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++K +V SW S+IA + EAL F M+ + P A +C+ + + G
Sbjct: 407 LEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG 466
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H + ++ G+ D+ + + L+++Y++CG +A LF EI ++ ++W +++G+
Sbjct: 467 LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDH--KDEITWNGLISGFG 524
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+ +AL++F ++ S+ G NVF S +SA + + + HG
Sbjct: 525 QSRLYEQALMVF----MKMSQAGAKY----NVFT----FISAISALANLADIKQGKQVHG 572
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+K G SE V N LI Y + G ++ ++ +F M ++ V+WN+II +Q+G E
Sbjct: 573 RAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLE 632
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSI 331
ALD+FDQM K +K N VT VL A +H+G++ G + + L +
Sbjct: 633 ALDLFDQM-KQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACV 691
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+D+ + GQ+D AR+ ++M N W +++ +H
Sbjct: 692 VDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVH 730
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/639 (39%), Positives = 389/639 (60%), Gaps = 38/639 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ D+N V +W +I + G S +A+ F M P R T + +C+ +
Sbjct: 101 VFDRMPDRN-VVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMG 159
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC---GELSDARKLFDEIPQRIRNIVSW 144
L G+Q H G DV V +L+DMY+KC G + DARK+FD +P + N++SW
Sbjct: 160 LLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMP--VHNVMSW 217
Query: 145 TSMLTGYVQNDNA-REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
T+++TGYVQ+ REA+ LF E + V + +SVL AC+ ++
Sbjct: 218 TAIITGYVQSGGCDREAIELFLEMV------------QGQVKPNHFTFSSVLKACANLSD 265
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ E + V+K S VGN+LI Y+R G+++ +RK FD + EK+ V++N+I+
Sbjct: 266 IWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNA 325
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YA++ + EA ++F++ ++ NA T +++L + +G + G+ IH +++K +
Sbjct: 326 YAKSLNSEEAFELFNE-IEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKS 384
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
++ + ++I MY +CG ++ A + FN+M + NV SWT+MI G+ H A AL+ F+KM+
Sbjct: 385 NLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKML 444
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+AGV PN +T+++VLSACSH GL+ EG +M E I P +EHY C+VDLLGR+G L
Sbjct: 445 EAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHL 504
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
+EA +L+ M KAD +V + LGACR+H N+DLG+ AA+ + E +P++ ++LLSN++
Sbjct: 505 EEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLH 564
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A+AG+WE+V R MK R L K G S +E+ KVH F VGD HPQ ++IY+ L++L
Sbjct: 565 ASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLA 624
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
+K++E+GY+ V+HDV++E+KE L HSEK+A NLRVCG
Sbjct: 625 LKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCG 684
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCHT + S V +EIV+RD+ RFH+FKDG CSC DYW
Sbjct: 685 DCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 149/481 (30%), Positives = 243/481 (50%), Gaps = 37/481 (7%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
+K ++ SW+++I+ A + EA+ AF M + P F ++CS ++ GK
Sbjct: 3 NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62
Query: 94 QAHQQAFIFG-------FHRDVFVSSALIDMYSKC-GELSDARKLFDEIPQRIRNIVSWT 145
IFG F DV V ALIDM+ K G+L A K+FD +P RN+V+WT
Sbjct: 63 ------IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPD--RNVVTWT 114
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
M+T + Q +R+A+ LF + +L D ++ V+SAC+ + +
Sbjct: 115 LMITRFQQLGFSRDAVDLFLDMVL------------SGYVPDRFTLSGVVSACAEMGLLS 162
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYAR---GGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ H V+K G D +V VG +L+D YA+ G VD +RKVFD M + ++W +II
Sbjct: 163 LGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIIT 222
Query: 263 IYAQN-GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL 321
Y Q+ G EA+++F +MV+ VK N T S+VL A A+L + LG+ ++ V+KM L
Sbjct: 223 GYVQSGGCDREAIELFLEMVQG-QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRL 281
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK 381
VG S+I MY +CG ++ ARKAF+ + EKN+ S+ ++ Y + EA +LF +
Sbjct: 282 ASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNE 341
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
+ AG N TF S+LS S G + +G +++ + + + ++ + R G
Sbjct: 342 IEGAGTGVNAFTFASLLSGASSIGAIGKG-EQIHSRILKSGFKSNLHICNALISMYSRCG 400
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--LEPNNCGYHVLL 499
++ A+ + M + + W S++ H K+ E + PN Y +L
Sbjct: 401 NIEAAFQVFNEMG-DGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVL 459
Query: 500 S 500
S
Sbjct: 460 S 460
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 172/355 (48%), Gaps = 43/355 (12%)
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
++D V+W+++I+ YA N A EA+ F M++ N + V A ++ + LGK
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLE-CGFYPNEYCFTGVFRACSNKENISLGK 62
Query: 311 CIHDQVIKMDLEES-VIVGTSIIDMYCKC-GQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
I ++K ES V VG ++IDM+ K G ++ A K F++M ++NV +WT MI +
Sbjct: 63 IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPG 426
+R+A+DLF M+ +G P+ T V+SAC+ GL+ G +H L M +++
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCL-VMKSGLDLDVC 181
Query: 427 VEHYGC-MVDLLGRA---GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
V GC +VD+ + G + +A + + M V + + W +++ D I
Sbjct: 182 V---GCSLVDMYAKCVADGSVDDARKVFDRMPVH-NVMSWTAIITGYVQSGGCDREAI-- 235
Query: 483 KKLF------ELEPNNCGYHVLLSNIYANAGRWEDV---ERTRSLMKNRRLAKTP--GFS 531
+LF +++PN H S++ D+ E+ +L+ RLA G S
Sbjct: 236 -ELFLEMVQGQVKPN----HFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNS 290
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
L+ + + G+ E+ + K ++ L E N+ V Y T + + ++ EE
Sbjct: 291 LISMYSR-----CGNMENAR--KAFDVLFEKNL----VSYNTIVNAYAKSLNSEE 334
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/629 (38%), Positives = 377/629 (59%), Gaps = 33/629 (5%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D+ NV WN ++ + D ++ F M + P T+PC +++C+ +++ G+
Sbjct: 306 DRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGE 365
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H + GF D++VS LIDMYSK G L AR++ + + +++VSWTSM+ GYVQ
Sbjct: 366 QIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVL--EAKDVVSWTSMIAGYVQ 423
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
++ +EAL FK+ L ++ D++ +AS +SAC+ + + H
Sbjct: 424 HEFCKEALETFKDMQL------------FGIWPDNIGLASAISACAGIKAMRQGQQIHSR 471
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V G+ ++V + N L++ YAR G + +F+ + KD +TWN +++ +AQ+GL EA
Sbjct: 472 VYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEA 531
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L+VF +M ++ VK N T + + A A+L ++ GK IH VIK V ++I
Sbjct: 532 LEVFIKMYQA-GVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALIS 590
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
+Y KCG ++ A+ F +M E+N SW +I H EALDLF +M + G++PN +T
Sbjct: 591 LYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVT 650
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
F+ VL+ACSH GLV+EG + +M E I P +HY C+VD+LGRAG+L A +E M
Sbjct: 651 FIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEM 710
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
V A+ +VW +LL ACR+HKN+++GE+AAK L ELEP++ +VLLSN YA G+W +
Sbjct: 711 PVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRD 770
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
R +MK+R + K PG S +E++ VHAF VGD+ HP +IY+YL +L+ +L ++GY+
Sbjct: 771 HVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQ 830
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
+ H+ ++E+K+ T +HSEKLA NLRVC DCHT ++ S
Sbjct: 831 GNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMKFTS 890
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+V+ REIV+RD RFH+F +G CSCGD+W
Sbjct: 891 EVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/439 (31%), Positives = 222/439 (50%), Gaps = 31/439 (7%)
Query: 76 FPCAIKSC-SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
F CA++ C ++ H +A G D + LID+Y+K G + AR++F+++
Sbjct: 44 FACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQL 103
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
R + VSW +ML+GY +N EA+ L+ + C G V ++SV
Sbjct: 104 SAR--DNVSWVAMLSGYARNGLGEEAVGLYHQM-----HCSG-------VVPTPYVLSSV 149
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
LSAC++ + H V K+G SE VGN LI Y R G + ++ +VF M D
Sbjct: 150 LSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDR 209
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
VT+N++I+ +AQ G AL++F++M + + + VT++++L A A +G L GK +H
Sbjct: 210 VTFNTLISRHAQCGNGESALEIFEEM-RLSGWTPDCVTIASLLAACASIGDLNKGKQLHS 268
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
++K + I+ S++D+Y KCG + A + F NV W M+ YG +
Sbjct: 269 YLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAK 328
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----Y 430
+ DLF +M+ AGVRPN T+ +L C++AG + L H +I+ G E
Sbjct: 329 SFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEIN-----LGEQIHLLSIKTGFESDMYVS 383
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD--LGEIAAKKLFEL 488
G ++D+ + G L +A ++E ++ K D V W S++ H+ L +LF +
Sbjct: 384 GVLIDMYSKYGWLDKARRILEVLEAK-DVVSWTSMIAGYVQHEFCKEALETFKDMQLFGI 442
Query: 489 EPNNCGYHVLLSNIYANAG 507
P+N G L S I A AG
Sbjct: 443 WPDNIG---LASAISACAG 458
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 217/439 (49%), Gaps = 18/439 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F + ++NV SW ++++ AR G EA+ + M + PT + +C+
Sbjct: 99 VFEQLSARDNV-SWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAA 157
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H Q + G + V +ALI +Y + G LS A ++F E+P R V++ ++
Sbjct: 158 LFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDR--VTFNTL 215
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ + Q N AL +F+E L D V IAS+L+AC+ +
Sbjct: 216 ISRHAQCGNGESALEIFEEMRL------------SGWTPDCVTIASLLAACASIGDLNKG 263
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H +++K G + + +L+D Y + G + + ++F + V WN ++ Y Q
Sbjct: 264 KQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQI 323
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
A++ D+F QMV + V+ N T +L + G + LG+ IH IK E + V
Sbjct: 324 SDLAKSFDLFCQMV-AAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYV 382
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+IDMY K G +D AR+ ++ K+V SWT+MIAGY H +EAL+ F M G+
Sbjct: 383 SGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGI 442
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ I S +SAC+ +++G +++ + V + +V+L R G+ KEA+
Sbjct: 443 WPDNIGLASAISACAGIKAMRQG-QQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAF 501
Query: 448 DLIEGMKVKADFVVWGSLL 466
L E ++ K D + W ++
Sbjct: 502 SLFEAIEHK-DKITWNGMV 519
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 215/437 (49%), Gaps = 25/437 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
++N++I+ A+ G+ AL F MR TP T + +C+++ DL+ GKQ H
Sbjct: 211 TFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYL 270
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G D + +L+D+Y KCG + +A ++F + N+V W ML Y Q + +
Sbjct: 271 LKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDR--TNVVLWNLMLVAYGQISDLAK 328
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
+ LF + + + V + +L C+ + E H IK GF
Sbjct: 329 SFDLFCQMV------------AAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGF 376
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+S++ V LID Y++ G +D +R++ + + KD V+W S+IA Y Q+ EAL+ F
Sbjct: 377 ESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKD 436
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M + + + + L++ + A A + +R G+ IH +V V + +++++Y +CG
Sbjct: 437 M-QLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCG 495
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+ A F ++ K+ +W M++G+ EAL++F KM +AGV+ N TFVS +S
Sbjct: 496 RSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSIS 555
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
A ++ +++G H I+ G E ++ L G+ G +++A M
Sbjct: 556 ASANLADIKQG-----KQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSE 610
Query: 456 KADFVVWGSLLGACRIH 472
+ + V W +++ +C H
Sbjct: 611 R-NHVSWNTIITSCSQH 626
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 168/342 (49%), Gaps = 23/342 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++ +V SW S+IA + EAL F M+ + P AI +C+ + + G
Sbjct: 406 LEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQG 465
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H + ++ G+ DV + +AL+++Y++CG +A LF+ I + + ++W M++G+
Sbjct: 466 QQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDK--ITWNGMVSGFA 523
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+ EAL E ++ + G NVF S +SA + + + H
Sbjct: 524 QSGLYEEAL----EVFIKMYQAG----VKYNVFT----FVSSISASANLADIKQGKQIHA 571
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
VIK G SE V N LI Y + G ++ ++ F M E++ V+WN+II +Q+G E
Sbjct: 572 TVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLE 631
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS-- 330
ALD+FDQM K +K N VT VL A +H+G++ G M E +
Sbjct: 632 ALDLFDQM-KQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKS---MSSEHGIHPRPDHY 687
Query: 331 --IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + GQ+D ARK +M N W +++ +H
Sbjct: 688 ACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVH 729
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/664 (38%), Positives = 386/664 (58%), Gaps = 68/664 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + WN++ A D V AL+ + M L L P TFP +KSC+ G
Sbjct: 63 IQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEG 122
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR------------------------ 128
+Q H Q FGF D+++ ++LI MY + G L DA+
Sbjct: 123 QQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASR 182
Query: 129 -------KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
K+FDEIP ++++VSW + ++GY + N +EAL LFK+ +
Sbjct: 183 GXIESAHKMFDEIP--VKDVVSWNAXISGYAETGNYKEALELFKKMM------------K 228
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
NV D + +VLSAC++ + H ++ GF + + N LID Y++ G ++
Sbjct: 229 TNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELET 288
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ +F G+ KD ++WN++I Y L EAL +F M++S + K N VT+ ++L A A
Sbjct: 289 ACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGE-KPNDVTMLSILSACA 347
Query: 302 HLGVLRLGKCIH---DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
HLG + +G+ IH D+ +K + + + TS+IDMY KCG ++ A++ F+ M +++ S
Sbjct: 348 HLGAIDIGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSS 406
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
W AMI G+ MH RA A D+F +M K G+ P+ ITFV +LSACSH+G++ G H +M
Sbjct: 407 WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 466
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
++ + P +EHYGCM+DL G +G KEA +I M+++ D V+W SLL AC++H NV+LG
Sbjct: 467 RDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELG 526
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
E A+ L ++EP N G +VLLSNIYA A RW +V +TR+L+ ++ + K PG S +E+
Sbjct: 527 ESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSV 586
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
VH F++GDK HP++ +IY LEE+ V L+E G+V D + V+ ++++E KE LR HSEKL
Sbjct: 587 VHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKL 646
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVC +CH +LISK+ REI+ RD RFH+F+DG CSC
Sbjct: 647 AIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSC 706
Query: 641 GDYW 644
DYW
Sbjct: 707 NDYW 710
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 138/295 (46%), Gaps = 43/295 (14%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVD---VSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H +IK G + + L++ H D + VFD + E + WN++ +A +
Sbjct: 22 HAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHALS 81
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
AL ++ MV S + N+ T +L + A + G+ +H QV+K + + +
Sbjct: 82 SDPVSALKLYVCMV-SLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYI 140
Query: 328 GTSIIDMYCKCGQ-------------------------------VDLARKAFNQMKEKNV 356
TS+I MY + G+ ++ A K F+++ K+V
Sbjct: 141 HTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDV 200
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH---W 413
SW A I+GY +EAL+LF KM+K VRP+ T V+VLSAC+ +G ++ G W
Sbjct: 201 VSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSW 260
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+N G N++ ++DL + G+L+ A L +G+ K D + W +L+G
Sbjct: 261 INDHGFGXNLKI----VNALIDLYSKCGELETACGLFQGLSNK-DVISWNTLIGG 310
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 98/217 (45%), Gaps = 13/217 (5%)
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD---LARKAFNQMKEKNVRSWTAMIAGY 366
+ IH Q+IK L + + +++ D A F+ ++E + W M G+
Sbjct: 19 RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGH 78
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ AL L+ M+ G+ PN TF +L +C+ + +EG L+ +F +
Sbjct: 79 ALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEG-QQLHGQVLKFGFDLD 137
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
+ + ++ + + G+L++A + + + D V + +L+ ++ +A K+F
Sbjct: 138 LYIHTSLISMYVQNGRLEDAQKVXDKSSHR-DVVSYTALITGYASRGXIE----SAHKMF 192
Query: 487 ELEP--NNCGYHVLLSNIYANAGRW-EDVERTRSLMK 520
+ P + ++ +S YA G + E +E + +MK
Sbjct: 193 DEIPVKDVVSWNAXISG-YAETGNYKEALELFKKMMK 228
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 261/636 (41%), Positives = 385/636 (60%), Gaps = 36/636 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSAL 86
+F++ ++ V +WN+++A AR G + A+ M++ P T + +C+
Sbjct: 116 VFDRMPVRDRV-AWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANA 174
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L + ++AH A G V V++A++D Y KCG++ AR +FD +P +N VSW +
Sbjct: 175 RALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMP--TKNSVSWNA 232
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ GY QN ++REAL LF + E V V V++ + L AC +
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEE------------GVDVTDVSVLAALQACGELGCLDE 280
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H +++ G DS V V N LI Y++ VD++ VFD + + V+WN++I AQ
Sbjct: 281 GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQ 340
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG + +A+ +F +M + +VK ++ TL +V+ A+A + + IH I++ L++ V
Sbjct: 341 NGCSEDAVRLFTRM-QLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVY 399
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V T++IDMY KCG+V++AR FN +E++V +W AMI GYG H + A++LF +M G
Sbjct: 400 VLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIG 459
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+ PN TF+SVLSACSHAGLV EG + +M ++ +EPG+EHYG MVDLLGRAGKL EA
Sbjct: 460 IVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
+ I+ M + V+G++LGAC++HKNV+L E +A+K+FEL P YHVLL+NIYANA
Sbjct: 520 WAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANA 579
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
W+DV R R+ M+ L KTPG+S+++L+ ++H F G H Q ++IY L +L ++
Sbjct: 580 SMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEI 639
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+ VGYV D T IHDV+ + K L HSEKLA NLRVC DCH
Sbjct: 640 KAVGYVPD-TDSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCH 698
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LIS V REI++RD +RFH+FKDG CSCGDYW
Sbjct: 699 NATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 231/454 (50%), Gaps = 26/454 (5%)
Query: 53 DSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS 112
D AL AF +M P TF +K C+A DL +G+ H Q G + ++
Sbjct: 39 DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
AL +MY+KC +DAR++FD +P +R+ V+W +++ GY +N AR A+ + EE
Sbjct: 99 ALANMYAKCRRPADARRVFDRMP--VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEG 156
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
E DS+ + SVL AC+ AH F I+ G + V V ++DA
Sbjct: 157 E-----------RPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDA 205
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
Y + G + +R VFD M K++V+WN++I YAQNG + EAL +F++MV+ V V+
Sbjct: 206 YCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEE-GVDVTDVS 264
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
+ A L A LG L G +H+ ++++ L+ +V V ++I MY KC +VDLA F+++
Sbjct: 265 VLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELD 324
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
+ SW AMI G + + +A+ LF +M V+P+ T VSV+ A + +
Sbjct: 325 RRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQA-R 383
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
W++ +++ V ++D+ + G++ A L + + + W +++ H
Sbjct: 384 WIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER-HVITWNAMIHGYGSH 442
Query: 473 KNVDLGEIAAKKLFE------LEPNNCGYHVLLS 500
G+ AA +LFE + PN + +LS
Sbjct: 443 ---GFGK-AAVELFEEMKSIGIVPNETTFLSVLS 472
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/635 (40%), Positives = 377/635 (59%), Gaps = 47/635 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS----- 91
+ FS N+++ A+ GD +A+ F +++ P ++ I C LH+ H
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIKQ----PDIVSWNAVIAGC-VLHEHHEQALEL 346
Query: 92 ----GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+Q H D+FVS L+DMYSKC L DAR F+ +P++ ++++W ++
Sbjct: 347 LGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEK--DLIAWNAI 404
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY Q EAL LF E + + + + ++++L + + + V V
Sbjct: 405 ISGYSQYWEDMEALSLFVEM------------HKEGIGFNQTTLSTILKSTAGLQVVHVC 452
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
HG +K GF S++ V N+LID+Y + HV+ + ++F+ D V++ S+I YAQ
Sbjct: 453 RQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQY 512
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EAL +F +M + ++K + S++L A A+L GK +H ++K +
Sbjct: 513 GQGEEALKLFLEM-QDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFA 571
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G S+++MY KCG +D A +AF+++ E+ + SW+AMI G H R+AL LF +M+K GV
Sbjct: 572 GNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGV 631
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
PN+IT VSVL AC+HAGLV E + +M F +P EHY CM+DLLGRAGK+ EA
Sbjct: 632 SPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAV 691
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+L+ M +A+ VWG+LLGA RIHK+V+LG AA+ LF LEP G HVLL+NIYA+AG
Sbjct: 692 ELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAG 751
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+WE+V R LM++ ++ K PG S +E++ KV+ FLVGD+ H + ++IY L+EL+ +
Sbjct: 752 KWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMD 811
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
+ GYV + +HDV+Q EKE+ L HSEKLA NLRVC DCHT
Sbjct: 812 KAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHT 871
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ I K+V REI+VRD RFH+FKDG CSCGDYW
Sbjct: 872 AFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 156/535 (29%), Positives = 258/535 (48%), Gaps = 91/535 (17%)
Query: 31 KYVDKN---NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
K VD++ ++ SW+++I+ A+ G AL AF M L + TF +K+CS +
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVK 171
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL GKQ H + GF DVFV++ L+ MY+KC E D+++LFDEIP+ RN+VSW ++
Sbjct: 172 DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPE--RNVVSWNAL 229
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ YVQ D EA+ LF E +L G N +++S+++AC+ + +
Sbjct: 230 FSCYVQXDFCGEAVGLFYEMVL-----SGIKPN-------EFSLSSMVNACTGLRDSSRG 277
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG++IK G+D + N L+D YA+ G + + VF+ + + D V+WN++IA +
Sbjct: 278 KIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLH 337
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+AL++ QM + +H ++KMD+E + V
Sbjct: 338 EHHEQALELLGQMKRQ----------------------------LHSSLMKMDMESDLFV 369
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++DMY KC ++ AR AFN + EK++ +W A+I+GY + EAL LF +M K G+
Sbjct: 370 SVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGI 429
Query: 388 RPNYITFVSVLSACS-----------HAGLVQEGWH--------WLNTMGHEFNIEPG-- 426
N T ++L + + H V+ G+H +++ G ++E
Sbjct: 430 GFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAER 489
Query: 427 ---------VEHYGCMVDLLGRAGKLKEAYDL---IEGMKVKADFVVWGSLLGACRIHKN 474
+ + M+ + G+ +EA L ++ M++K D V SLL AC
Sbjct: 490 IFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC----- 544
Query: 475 VDLGEIAAKKLFELEPNNCGYHVL-------LSNIYANAGRWEDVERTRSLMKNR 522
+L K + G+ VL L N+YA G +D R S + R
Sbjct: 545 ANLSAFEQGKQLHVHILKYGF-VLDIFAGNSLVNMYAKCGSIDDAGRAFSELTER 598
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 163/317 (51%), Gaps = 15/317 (4%)
Query: 66 KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
K + TPT ++ + C L G Q H G D + + LI++YSKC
Sbjct: 49 KGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFG 108
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
ARKL DE + ++VSW+++++GY QN AL+ F E L +C
Sbjct: 109 YARKLVDESSE--PDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKC----------- 155
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+ +SVL ACS V + + HG V+ GF+ +V V NTL+ YA+ S+++
Sbjct: 156 -NEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL 214
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD + E++ V+WN++ + Y Q EA+ +F +MV S +K N +LS+++ A L
Sbjct: 215 FDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLS-GIKPNEFSLSSMVNACTGLRD 273
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
GK IH +IK+ + +++DMY K G + A F ++K+ ++ SW A+IAG
Sbjct: 274 SSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAG 333
Query: 366 YGMHCRAREALDLFYKM 382
+H +AL+L +M
Sbjct: 334 CVLHEHHEQALELLGQM 350
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 158/305 (51%), Gaps = 29/305 (9%)
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
N SV+ + +LS C T + G H + K G + + N LI+ Y++
Sbjct: 51 NFTPTSVSYSKLLSQC--CTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFG 108
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+RK+ D E D V+W+++I+ YAQNGL AL F +M VKCN T S+VL A
Sbjct: 109 YARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEM-HLLGVKCNEFTFSSVLKAC 167
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
+ + LR+GK +H V+ E V V +++ MY KC + +++ F+++ E+NV SW
Sbjct: 168 SIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWN 227
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQE 409
A+ + Y EA+ LFY+M+ +G++PN + S+++AC+ H L++
Sbjct: 228 ALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKL 287
Query: 410 GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G+ W +P + +VD+ + G L +A + E +K + D V W +++ C
Sbjct: 288 GYDW----------DPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGC 334
Query: 470 RIHKN 474
+H++
Sbjct: 335 VLHEH 339
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/635 (39%), Positives = 376/635 (59%), Gaps = 36/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K KN V +W +I ++ G +A+ F + TP + T + +C L
Sbjct: 204 VFDKMQHKNLV-TWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELE 262
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
GKQ H G DVFV L+DMY+K + ++RK+F+ + N++SWT++
Sbjct: 263 FFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHH--NVMSWTAL 320
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GYVQ+ +EA+ LF L +V + +SVL AC+ + G+
Sbjct: 321 ISGYVQSRQEQEAIKLFCNML------------HGHVTPNCFTFSSVLKACASLPDFGIG 368
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG IK G + VGN+LI+ YAR G ++ +RK F+ + EK+ +++N+ N
Sbjct: 369 KQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAAD---AN 425
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
A ++ + F+ V+ T V + T + +L A +G + G+ IH ++K ++ +
Sbjct: 426 AKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCI 485
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++I MY KCG + A + FN M +NV +WT++I+G+ H A +AL+LFY+M++ GV
Sbjct: 486 NNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGV 545
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+PN +T+++VLSACSH GL+ E W N+M + +I P +EHY CMVDLLGR+G L EA
Sbjct: 546 KPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAI 605
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ I M AD +VW + LG+CR+H+N LGE AAKK+ E EP++ ++LLSN+YA+ G
Sbjct: 606 EFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEG 665
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RW+DV R MK ++L K G+S +E+ +VH F VGD HPQ KIY+ L+EL +K++
Sbjct: 666 RWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIK 725
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
+GY+ + V+HDV+ E+KE L HSEK+A NLRVCGDCHT
Sbjct: 726 NLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHT 785
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+ IS V REIVVRD+ RFH+ KDG CSC DYW
Sbjct: 786 AIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 204/398 (51%), Gaps = 27/398 (6%)
Query: 61 FSSMRK----LSLTPTRSTFPCAI--KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSAL 114
F S+RK L LT T ++ K+C +L GK H + G D + ++L
Sbjct: 21 FESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSL 80
Query: 115 IDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESEC 174
I +YSKCG+ +A +F + R++VSW+++++ + N ALL F L +C
Sbjct: 81 ITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHML----QC 136
Query: 175 GGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG-FDSEVGVGNTLIDAY 233
+ + ++ + ++L +CS F++K G FDS V VG LID +
Sbjct: 137 -----SRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMF 191
Query: 234 ARGG-HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
+GG + +R VFD M K+ VTW +I Y+Q GL +A+D+F +++ S + + T
Sbjct: 192 TKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVS-EYTPDKFT 250
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
L+++L A L LGK +H VI+ L V VG +++DMY K V+ +RK FN M
Sbjct: 251 LTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTML 310
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
NV SWTA+I+GY + +EA+ LF M+ V PN TF SVL AC A L G
Sbjct: 311 HHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKAC--ASLPDFG-- 366
Query: 413 WLNTMGHEFNIEPGVEHYGC----MVDLLGRAGKLKEA 446
+ H I+ G+ C ++++ R+G ++ A
Sbjct: 367 -IGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECA 403
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 261/636 (41%), Positives = 385/636 (60%), Gaps = 36/636 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSAL 86
+F++ ++ V +WN+++A AR G + A+ M++ P T + +C+
Sbjct: 116 VFDRMPVRDRV-AWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANA 174
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L + ++AH A G V V++A++D Y KCG++ AR +FD +P + N VSW +
Sbjct: 175 RALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTK--NSVSWNA 232
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ GY QN ++REAL LF + E V V V++ + L AC +
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEE------------GVDVTDVSVLAALQACGELGCLDE 280
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H +++ G DS V V N LI Y++ VD++ VFD + + V+WN++I AQ
Sbjct: 281 GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQ 340
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG + +A+ +F +M + +VK ++ TL +V+ A+A + + IH I++ L++ V
Sbjct: 341 NGCSEDAVRLFTRM-QLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVY 399
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V T++IDMY KCG+V++AR FN +E++V +W AMI GYG H + A++LF +M G
Sbjct: 400 VLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIG 459
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+ PN TF+SVLSACSHAGLV EG + +M ++ +EPG+EHYG MVDLLGRAGKL EA
Sbjct: 460 IVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
+ I+ M + V+G++LGAC++HKNV+L E +A+K+FEL P YHVLL+NIYANA
Sbjct: 520 WAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANA 579
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
W+DV R R+ M+ L KTPG+S+++L+ ++H F G H Q ++IY L +L ++
Sbjct: 580 SMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEI 639
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+ VGYV D T IHDV+ + K L HSEKLA NLRVC DCH
Sbjct: 640 KAVGYVPD-TDSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCH 698
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LIS V REI++RD +RFH+FKDG CSCGDYW
Sbjct: 699 NATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 231/454 (50%), Gaps = 26/454 (5%)
Query: 53 DSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS 112
D AL AF +M P TF +K C+A DL +G+ H Q G + ++
Sbjct: 39 DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
AL +MY+KC +DAR++FD +P +R+ V+W +++ GY +N AR A+ + EE
Sbjct: 99 ALANMYAKCRRPADARRVFDRMP--VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEG 156
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
E DS+ + SVL AC+ AH F I+ G + V V ++DA
Sbjct: 157 E-----------RPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDA 205
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
Y + G + +R VFD M K++V+WN++I YAQNG + EAL +F++MV+ V V+
Sbjct: 206 YCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEE-GVDVTDVS 264
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
+ A L A LG L G +H+ ++++ L+ +V V ++I MY KC +VDLA F+++
Sbjct: 265 VLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELD 324
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
+ SW AMI G + + +A+ LF +M V+P+ T VSV+ A + +
Sbjct: 325 RRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQA-R 383
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
W++ +++ V ++D+ + G++ A L + + + W +++ H
Sbjct: 384 WIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER-HVITWNAMIHGYGSH 442
Query: 473 KNVDLGEIAAKKLFE------LEPNNCGYHVLLS 500
G+ AA +LFE + PN + +LS
Sbjct: 443 ---GFGK-AAVELFEEMKSIGIVPNETTFLSVLS 472
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 256/663 (38%), Positives = 387/663 (58%), Gaps = 66/663 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ WN++ A DSV AL+ + M L L P +FP +KSC+ L G
Sbjct: 25 IQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEG 84
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA------------------------- 127
+Q H G+ D++V+++LI MY++ G L DA
Sbjct: 85 QQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASR 144
Query: 128 ------RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
RKLFDEI ++++VSW +M++GYV+ N +EAL L+K+ +
Sbjct: 145 GYINNARKLFDEI--SVKDVVSWNAMISGYVETCNFKEALELYKDMM------------K 190
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
NV D + +V+SAC++ + H ++ GF S + + N LID Y++ G V+
Sbjct: 191 TNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVET 250
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ +F G+ +KD ++WN++I + L EAL +F +M++S + N VT+ +VL A A
Sbjct: 251 ACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESP-NDVTMLSVLPACA 309
Query: 302 HLGVLRLGKCIHDQVIK--MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
HLG + +G+ IH + K + + + TS+IDMY KCG ++ A++ F+ M +++ SW
Sbjct: 310 HLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSW 369
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
AMI G+ MH +A A DLF KM K G+ P+ ITFV +LSACSH+G++ G H +M
Sbjct: 370 NAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQ 429
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
++ I P +EHYGCM+DLLG G KEA ++I M ++ D V+W SLL AC++H NV+LGE
Sbjct: 430 DYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGE 489
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
A+ L ++EP N G +VLLSNIYA AGRW+ V + R+L+ ++ + K PG S +E+ V
Sbjct: 490 SYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVV 549
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
H F++GDK HP++ +IY LEE+ + ++E G+V D + V+ ++++E KE LR HSEKLA
Sbjct: 550 HEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 609
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLRVC +CH +LISK+ REI+ RD R H KDG+ SC
Sbjct: 610 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCH 669
Query: 642 DYW 644
DYW
Sbjct: 670 DYW 672
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 131/265 (49%), Gaps = 41/265 (15%)
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
+F+ + E + + WN++ +A N + AL ++ M+ S + N+ + +L + A
Sbjct: 21 IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMI-SLGLLPNSYSFPFLLKSCAKSK 79
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ------------------------ 340
L G+ IH V+K+ + + V TS+I MY + G+
Sbjct: 80 ALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALIT 139
Query: 341 -------VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
++ ARK F+++ K+V SW AMI+GY C +EAL+L+ M+K V+P+ T
Sbjct: 140 GYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDEST 199
Query: 394 FVSVLSACSHAGLVQEGWH---WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
V+V+SAC+ +G ++ G W+ G NI+ ++DL + G+++ A L
Sbjct: 200 MVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKI----VNVLIDLYSKCGEVETACGLF 255
Query: 451 EGMKVKADFVVWGSLLGACRIHKNV 475
+G+ K D + W +L+G H N+
Sbjct: 256 QGL-AKKDVISWNTLIGG-HTHMNL 278
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/639 (38%), Positives = 373/639 (58%), Gaps = 42/639 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K D++ V WN++I L R ++++ F M + +T + + + +
Sbjct: 160 VFDKMPDRDTVL-WNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQ 218
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ G A GFH D +V + LI ++SKC ++ AR LF I R ++VS+ ++
Sbjct: 219 EVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMI--RKPDLVSYNAL 276
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS----ACSRVTV 203
++G+ N A+ F+E L+ S + V + ++S AC
Sbjct: 277 ISGFSCNGETECAVKYFRELLVS------GQRVSSSTMVGLIPVSSPFGHLHLACC---- 326
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
GF +K G + V L Y+R +D++R++FD EK WN++I+
Sbjct: 327 ------IQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISG 380
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YAQ+GL A+ +F +M+ +T+ N VT++++L A A LG L GK +H + +LE+
Sbjct: 381 YAQSGLTEMAISLFQEMM-TTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQ 439
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
++ V T++IDMY KCG + A + F+ EKN +W MI GYG+H EAL LF +M+
Sbjct: 440 NIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEML 499
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
G +P+ +TF+SVL ACSHAGLV+EG + M +++ IEP EHY CMVD+LGRAG+L
Sbjct: 500 HLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQL 559
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
++A + I M V+ VWG+LLGAC IHK+ +L +A+++LFEL+P N GY+VLLSNIY
Sbjct: 560 EKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIY 619
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
+ + R +K R L+KTPG +L+E+ G H F+ GD+ H Q IY LEEL
Sbjct: 620 SVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELT 679
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
K++E+GY ++ + +HDV++EEKE+ +HSEKLA NLRVC
Sbjct: 680 GKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIRIIKNLRVCL 739
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH + ISK+ +R IVVRD+ RFH+FKDG+CSCGDYW
Sbjct: 740 DCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 239/479 (49%), Gaps = 35/479 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V K ++F +N +I + D+ ++ +L+P T+ AI SA D + G
Sbjct: 66 VPKPDIFLFNVLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAI---SASPDDNLG 122
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H A + GF ++FV+SAL+D+Y K ++ ARK+FD++P R+ V W +M+TG V
Sbjct: 123 MCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPD--RDTVLWNTMITGLV 180
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+N +++ +FK+ + + V +DS +A+VL A + + V G
Sbjct: 181 RNCCYDDSVQVFKDMV------------AQGVRLDSTTVATVLPAVAEMQEVKVGMGIQC 228
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK-DAVTWNSIIAIYAQNGLAA 271
+K GF + V LI +++ VD +R +F GMI K D V++N++I+ ++ NG
Sbjct: 229 LALKLGFHFDDYVLTGLISVFSKCEDVDTARLLF-GMIRKPDLVSYNALISGFSCNGETE 287
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
A+ F +++ S + ++ T+ ++ + G L L CI +K V T++
Sbjct: 288 CAVKYFRELLVSGQ-RVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTAL 346
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+Y + ++DLAR+ F++ EK V +W AMI+GY A+ LF +M+ PN
Sbjct: 347 TTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNP 406
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+T S+LSAC+ G + G ++ + N+E + ++D+ + G + EA L +
Sbjct: 407 VTITSILSACAQLGALSFG-KSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFD 465
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLSNIYA 504
+ + + V W +++ +H D A KLF +P++ + LS +YA
Sbjct: 466 -LTSEKNTVTWNTMIFGYGLHGYGD----EALKLFNEMLHLGFQPSSVTF---LSVLYA 516
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 151/325 (46%), Gaps = 22/325 (6%)
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
K+C+ H + H Q G+ D+ + L G AR LF +P+ +
Sbjct: 17 KACTFPHL----AETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPK--PD 70
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
I + ++ G+ + +A + F LL+ + + +N F S + L C
Sbjct: 71 IFLFNVLIKGFSFSPDASS--ISFYTHLLKNTTL--SPDNFTYAFAISASPDDNLGMC-- 124
Query: 201 VTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSI 260
H + GFDS + V + L+D Y + V +RKVFD M ++D V WN++
Sbjct: 125 ---------LHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTM 175
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
I +N +++ VF MV + V+ ++ T++ VL A+A + +++G I +K+
Sbjct: 176 ITGLVRNCCYDDSVQVFKDMV-AQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLG 234
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
V T +I ++ KC VD AR F +++ ++ S+ A+I+G+ + A+ F
Sbjct: 235 FHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFR 294
Query: 381 KMIKAGVRPNYITFVSVLSACSHAG 405
+++ +G R + T V ++ S G
Sbjct: 295 ELLVSGQRVSSSTMVGLIPVSSPFG 319
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 28/263 (10%)
Query: 7 SSVSSVVSNVDKHSTNTNLT-TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR 65
SVS+ ++ + +L LF++ +K V +WN++I+ A+ G + A+ F M
Sbjct: 340 PSVSTALTTIYSRLNEIDLARQLFDESSEKT-VAAWNAMISGYAQSGLTEMAISLFQEMM 398
Query: 66 KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
TP T + +C+ L L GK HQ ++++VS+ALIDMY+KCG +S
Sbjct: 399 TTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNIS 458
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL---LEESECGGASENSD 182
+A +LFD + +N V+W +M+ GY + EAL LF E L + S
Sbjct: 459 EASQLFDLTSE--KNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPS---------- 506
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEG---AHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
SV SVL ACS + V EG H V K + ++D R G +
Sbjct: 507 -----SVTFLSVLYACSHAGL--VREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQL 559
Query: 240 DVSRKVFDGM-IEKDAVTWNSII 261
+ + + M +E W +++
Sbjct: 560 EKALEFIRKMPVEPGPAVWGTLL 582
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 97/200 (48%), Gaps = 4/200 (2%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +I+ G+ ++ L G +R +F + + D +N +I ++ +
Sbjct: 28 HAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSP-D 86
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
A ++ + ++K+T + + T + AI+ LG C+H + + ++ V ++
Sbjct: 87 ASSISFYTHLLKNTTLSPDNFTYA---FAISASPDDNLGMCLHAHAVVDGFDSNLFVASA 143
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++D+YCK +V ARK F++M +++ W MI G +C +++ +F M+ GVR +
Sbjct: 144 LVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLD 203
Query: 391 YITFVSVLSACSHAGLVQEG 410
T +VL A + V+ G
Sbjct: 204 STTVATVLPAVAEMQEVKVG 223
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 258/632 (40%), Positives = 371/632 (58%), Gaps = 39/632 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-SLTPTRSTFPCAIKSCSALHDLHS 91
V + WN+++A L+ EAL AF M S+ P +T + + + + +
Sbjct: 184 VPSPDTVLWNTLLAGLS----GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTM 239
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ H G + V + LI +Y+KCG++ AR LFD + ++V++ ++++GY
Sbjct: 240 GRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRM--EGPDLVTYNALISGY 297
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
N ++ LFKE + G S + V A+ V S + G H
Sbjct: 298 SINGMVGSSVELFKELV------GMGLRPSSSTLV---ALIPVHSPFGHEPLAGCL---H 345
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
V+K G D+ V L Y R +D +R+ FD M EK +WN++I+ YAQNGL
Sbjct: 346 AHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTE 405
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
A+ +F QM ++ +V+ N +T+S+ L A A LG L LGK +H + LE +V V T++
Sbjct: 406 MAVALFQQM-QALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTAL 464
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
IDMY KCG + AR F+ M KNV SW MI+GYG+H + EAL L+ M+ A + P
Sbjct: 465 IDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTS 524
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI- 450
TF+SVL ACSH GLV+EG +M ++ I PG+EH CMVDLLGRAG+LKEA++LI
Sbjct: 525 STFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELIS 584
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
E K +WG+LLGAC +HK+ DL ++A++KLFELEP N GY+VLLSN+Y + ++
Sbjct: 585 EFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYS 644
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
+ R K+R+L KTPG +L+E+ + H F+ GD+ HPQ + IY YLE+L K+ E G
Sbjct: 645 EAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAG 704
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
Y D + ++DV++EEKE +++HSEKLA NLRVC DCH +
Sbjct: 705 YRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATK 764
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ISKV R IVVRD+ RFH+F+DG+CSCGDYW
Sbjct: 765 IISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 204/427 (47%), Gaps = 32/427 (7%)
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG------------KQAHQQAFIFGFH 105
LR+ ++R L P+ +F A + S G + H A GF
Sbjct: 96 LRSLPTLRADLLFPSPDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFA 155
Query: 106 RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
D FV+SAL +Y +DARK+FD +P + V W ++L G + EAL F
Sbjct: 156 ADNFVASALAKLYFTLSRGNDARKVFDAVPS--PDTVLWNTLLAGL----SGSEALEAFV 209
Query: 166 EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGV 225
+ +V DS +ASVL A + V + H F K G V
Sbjct: 210 RM-----------AGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258
Query: 226 GNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD 285
LI YA+ G ++ +R +FD M D VT+N++I+ Y+ NG+ ++++F ++V
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELV-GMG 317
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
++ ++ TL A++ + G L C+H V+K L+ + V T++ +YC+ +D AR
Sbjct: 318 LRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSAR 377
Query: 346 KAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
+AF+ M EK + SW AMI+GY + A+ LF +M VRPN +T S LSAC+ G
Sbjct: 378 RAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLG 437
Query: 406 LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
+ G W++ + +E V ++D+ + G + EA + + M K + V W +
Sbjct: 438 ALSLG-KWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNK-NVVSWNVM 495
Query: 466 LGACRIH 472
+ +H
Sbjct: 496 ISGYGLH 502
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/626 (39%), Positives = 357/626 (57%), Gaps = 33/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SWNS+IA A+ G A + F M+K L P + TF + C L G+Q H
Sbjct: 551 DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIH 610
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G DV + +ALI+MY +CG L DA ++F + R RN++SWT+M+ G+
Sbjct: 611 MLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSL--RHRNVMSWTAMIGGFADQGE 668
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
R+A LF + +D +S+L AC + ++
Sbjct: 669 DRKAFELFWQM------------QNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILN 716
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G++ + GVGN LI AY++ G + +RKVFD M +D ++WN +IA YAQNGL AL
Sbjct: 717 SGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQF 776
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
QM + V N + ++L A + L GK +H +++K ++ V VG ++I MY
Sbjct: 777 AYQM-QEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYA 835
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG ++ A++ F+ EKNV +W AMI Y H A +ALD F M K G++P+ TF S
Sbjct: 836 KCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTS 895
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+LSAC+H+GLV EG +++ + + P +EHYGC+V LLGRAG+ +EA LI M
Sbjct: 896 ILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFP 955
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
D VW +LLGACRIH NV L E AA +L N +VLLSN+YA AGRW+DV + R
Sbjct: 956 PDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIR 1015
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
+M+ R + K PG S +E+ +H F+ D+ HP+ +IYE L+ L+++++ GY D
Sbjct: 1016 RVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQ 1075
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V+H++D+E +E +L HSE+LA NLR+CGDCHT + ISK+V
Sbjct: 1076 YVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLV 1135
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
REI+ RDS RFH FK+G CSC D+W
Sbjct: 1136 GREIIARDSNRFHTFKNGKCSCEDFW 1161
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 244/477 (51%), Gaps = 35/477 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +V SWNS+I+ A+ G +A + F M+ P++ T+ + +C + +L G
Sbjct: 143 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYG 202
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H + G+ RD V ++L++MY KC +L AR++F I +R ++VS+ +ML Y
Sbjct: 203 KKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRR--DVVSYNTMLGLYA 260
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q E + LF + +S+ + D V ++L A + ++ + H
Sbjct: 261 QKAYVEECIGLFGQM------------SSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHK 308
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ G +S++ VG L + R G V +++ + ++D V +N++IA AQ+G E
Sbjct: 309 LAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEE 368
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A + + QM +S V N T +VL A + L G+ IH + ++ V +G S+I
Sbjct: 369 AFEQYYQM-RSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLI 427
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
MY +CG + AR+ FN M ++++ SW A+IAGY EA+ L+ +M GV+P +
Sbjct: 428 SMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRV 487
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG----CMVDLLGRAGKLKEAYD 448
TF+ +LSAC+++ +G M HE + G++ G ++++ R G + EA +
Sbjct: 488 TFLHLLSACTNSSAYSDG-----KMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQN 542
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF------ELEPNNCGYHVLL 499
+ EG + + D + W S++ H + + AA KLF LEP+ + +L
Sbjct: 543 VFEGTRAR-DIISWNSMIAGHAQHGSYE----AAYKLFLEMKKEGLEPDKITFASVL 594
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 232/454 (51%), Gaps = 24/454 (5%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ +V S+N+++ A+ E + F M + P + T+ + + + L GK+
Sbjct: 246 RRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKR 305
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H+ A G + D+ V +AL M+ +CG+++ A++ + R ++V + +++ Q+
Sbjct: 306 IHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADR--DVVVYNALIAALAQH 363
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+ EA + + SD V ++ SVL+ACS G E H +
Sbjct: 364 GHYEEAFEQYYQM------------RSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHI 411
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+ G S+V +GN+LI YAR G + +R++F+ M ++D ++WN+IIA YA+ EA+
Sbjct: 412 SEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAM 471
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
++ QM +S VK VT +L A + GK IH+ +++ ++ + + ++++M
Sbjct: 472 KLYKQM-QSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNM 530
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y +CG + A+ F + +++ SW +MIAG+ H A LF +M K G+ P+ ITF
Sbjct: 531 YRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITF 590
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
SVL C + ++ G ++ + E ++ V ++++ R G L++AY++ ++
Sbjct: 591 ASVLVGCKNPEALELG-RQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLR 649
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
+ + + W +++G D GE +K FEL
Sbjct: 650 HR-NVMSWTAMIGGF-----ADQGE--DRKAFEL 675
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 214/424 (50%), Gaps = 32/424 (7%)
Query: 71 PT---RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
PT R+ + +++C+ L K+ H Q G D+F+S+ LI+MY KC +SDA
Sbjct: 77 PTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDA 136
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
++F ++P+ R+++SW S+++ Y Q ++A LF EE + G F+
Sbjct: 137 HQVFLKMPR--RDVISWNSLISCYAQQGFKKKAFQLF-----EEMQTAG--------FIP 181
Query: 188 S-VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
S + S+L+AC + H +I+ G+ + V N+L++ Y + + +R+VF
Sbjct: 182 SKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVF 241
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
G+ +D V++N+++ +YAQ E + +F QM S + + VT +L A +L
Sbjct: 242 SGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQM-SSEGIPPDKVTYINLLDAFTTPSML 300
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
GK IH + L + VGT++ M+ +CG V A++A +++V + A+IA
Sbjct: 301 DEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAAL 360
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG---WHWLNTMGHEFNI 423
H EA + +Y+M GV N T++SVL+ACS + + G ++ +GH ++
Sbjct: 361 AQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDV 420
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
+ G ++ + R G L A +L M K D + W +++ + D GE A
Sbjct: 421 QIG----NSLISMYARCGDLPRARELFNTMP-KRDLISWNAIIAG--YARREDRGE--AM 471
Query: 484 KLFE 487
KL++
Sbjct: 472 KLYK 475
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 184/419 (43%), Gaps = 51/419 (12%)
Query: 168 LLEESECGGASENSDNVF------VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
+ +E G E+ N + + A ++ C+R + H +++ G
Sbjct: 56 MRDEQHRGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGP 115
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
++ + N LI+ Y + V + +VF M +D ++WNS+I+ YAQ G +A +F++M
Sbjct: 116 DIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEM- 174
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
++ + +T ++L A L GK IH ++I+ + V S+++MY KC +
Sbjct: 175 QTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDL 234
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
AR+ F+ + ++V S+ M+ Y E + LF +M G+ P+ +T++++L A
Sbjct: 235 PSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAF 294
Query: 402 SHAGLVQEGWH------------------WLNTM--------GHEFNIEPGVEH----YG 431
+ ++ EG L TM G + +E + Y
Sbjct: 295 TTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYN 354
Query: 432 CMVDLLGRAGKLKEAYDLIEGMK---VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
++ L + G +EA++ M+ V + + S+L AC K + GE+ + E+
Sbjct: 355 ALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEV 414
Query: 489 -EPNNCGYHVLLSNIYANAGRWEDVERTRSL---MKNRRL----AKTPGFSLVELRGKV 539
++ L ++YA G D+ R R L M R L A G++ E RG+
Sbjct: 415 GHSSDVQIGNSLISMYARCG---DLPRARELFNTMPKRDLISWNAIIAGYARREDRGEA 470
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ + +KN V +WN++I A+ G + +AL F+ M K + P STF + +C+
Sbjct: 846 VFDNFTEKN-VVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACN--- 901
Query: 88 DLHSGKQAHQQAFIF-------GFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
HSG + IF G + L+ + + G +A L +++P
Sbjct: 902 --HSG-LVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMP 953
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/627 (39%), Positives = 373/627 (59%), Gaps = 33/627 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSL-TPTRSTFPCAIKSCSALHDLHSGKQA 95
+V +WNS++ AL++++ M + S P R TFP +K C+ L + GK
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H Q + H D+++ + L++MY+ CG+L AR LF+ + R N V WTSM++GY++N
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHR--NKVVWTSMISGYMKNH 159
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
EALLL+K+ +EE D D V +A+++SAC+ + GV H +
Sbjct: 160 CPNEALLLYKK--MEE----------DGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+ +G+ L++ YA+ G + +R+VFD + +KD W+++I Y +N + EAL
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQ 267
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F ++ ++++ N VT+ AV+ A A LG L G+ +HD + + SV + S+IDM+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG +D A++ F+ M K++ SW +M+ G +H REAL F+ M ++P+ ITF+
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFI 387
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
VL+ACSHAGLVQEG + + + EHYGCMVDLL RAG L EA + I M +
Sbjct: 388 GVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPL 447
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
+ D +WGS+LGACR++ N++LGE AA+ L ELEP N G ++LLSNIYA W +V++
Sbjct: 448 QPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKV 507
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
R LM + + KTPG S V + H+FL GD HP+ +I L ++ KL+ VGYV D
Sbjct: 508 RELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADT 567
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
+ V+ ++D +KE ++ HSEKLA NLRVC DCHT+I+L+SK+
Sbjct: 568 SEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKI 627
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
R+I +RD RFH+FKDG CSC DYW
Sbjct: 628 YQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 182/337 (54%), Gaps = 15/337 (4%)
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
R+ ++++W SML +V ++ R AL + E L E S NV D S+L
Sbjct: 39 RVLDVLTWNSMLRAFVNSNMPRRALQSYTEML----------ERSRNV-PDRFTFPSLLK 87
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
C+ + V + HG V+K S++ + TL++ YA G + +R +F+ M ++ V
Sbjct: 88 GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
W S+I+ Y +N EAL ++ +M + + VT++ ++ A A L L +G +H +
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKM-EEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHI 206
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
+MD++ ++G+++++MY KCG + AR+ F+Q+ +K+V +W+A+I GY + R+ EAL
Sbjct: 207 REMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEAL 266
Query: 377 DLFYKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
LF ++ + +RPN +T ++V+SAC+ G ++ G W++ V ++D
Sbjct: 267 QLFREVAGGSNMRPNEVTILAVISACAQLGDLETG-RWVHDYITRTQKGHSVSLNNSLID 325
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ + G + A + + M K D + W S++ +H
Sbjct: 326 MFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGLALH 361
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/624 (39%), Positives = 370/624 (59%), Gaps = 34/624 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQ 98
S+N +I R G +AL F M +++P + T +KSCS + DL G+
Sbjct: 137 SYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAY 196
Query: 99 AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR 158
AF GF D FV ++LI MY+ CG++ A LF + +++ +++W +M+ GYV+N + +
Sbjct: 197 AFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTV--QVKGVIAWNAMIAGYVKNGDWK 254
Query: 159 EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG 218
E + +FK L + D V + SV +AC R+ + + + ++G
Sbjct: 255 EVVEMFKGMLEVRAP------------FDEVTLLSVATACGRLGDANLGQWIAEYAEEKG 302
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
+ L+D YA+ G +D +R++FD M +D V W+++I+ Y Q+ EAL +F+
Sbjct: 303 MLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFN 362
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
+M + T+V N VT+ +VL A A LG L GK +H + + DL +VI+GT+++D Y KC
Sbjct: 363 EM-QGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKC 421
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G + A KAF M +N +WTA+I G + R+REAL+LF M++A + P +TF+ VL
Sbjct: 422 GCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVL 481
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
ACSH LV+EG +M ++ I P +EHYGCMVDLLGRAG + EAY I M ++ +
Sbjct: 482 LACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPN 541
Query: 459 FVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSL 518
VVW +LL AC +HKNV++GE A K++ L+P + G ++LLSN YA+ G+W++ R
Sbjct: 542 AVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKE 601
Query: 519 MKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSV 578
MK + + K PG SL+EL G + F D EHPQ +IYE + E+ ++ VGY+ +
Sbjct: 602 MKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADA 661
Query: 579 IHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
DVD+ EK++++ HSEKLA NLRVC DCH+ +LISKV +R
Sbjct: 662 RLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNR 721
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
EI+VRD RFH+FKDGLCSC DYW
Sbjct: 722 EIIVRDRNRFHHFKDGLCSCNDYW 745
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 171/343 (49%), Gaps = 25/343 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V V +WN++IA + GD E + F M ++ T +C L D + G
Sbjct: 232 VQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLG 291
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ + A G R +++AL+DMY+KCGEL AR+LFD + R++V+W++M++GY
Sbjct: 292 QWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRM--HSRDVVAWSAMISGYT 349
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+D REAL +F E G N ++ V + SVLSAC+ + + H
Sbjct: 350 QSDRCREALAIFNEM-------QGTEVNPND-----VTMVSVLSACAVLGALETGKWVHS 397
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++ ++ V +G L+D YA+ G + + K F+ M ++ TW ++I A NG + E
Sbjct: 398 YIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSRE 457
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK-----CIHDQVIKMDLEESVIV 327
AL++F M+++ +++ VT VLLA +H ++ G+ D I +E
Sbjct: 458 ALELFSSMLEA-NIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHY--- 513
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + G +D A + M E N W A+++ +H
Sbjct: 514 -GCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVH 555
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+ A ++N +I + + G +AL +F +M+ T V + T++ + + + + L +G+
Sbjct: 132 PRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGR 191
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
+ K V S+I MY CG V A F+ ++ K V +W AMIAGY +
Sbjct: 192 GVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNG 251
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
+E +++F M++ + +T +SV +AC G G W+ E +
Sbjct: 252 DWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLG-QWIAEYAEEKGMLRSRNLA 310
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+VD+ + G+L +A L + M + D V W +++
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSR-DVVAWSAMI 345
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/626 (40%), Positives = 367/626 (58%), Gaps = 39/626 (6%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
WN+ + +LA+ ++AL + M + P TFP A+KSC+AL G Q H Q
Sbjct: 16 PWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQI 75
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G + FV + LI MY K + +ARK+F+E + V + ++++GYV N E
Sbjct: 76 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSE 135
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+LLF++ N + V V+SV + ++ AC + H +K GF
Sbjct: 136 AVLLFRQM------------NEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGF 183
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
DS+V V N I Y + G V+ ++K+FD M K ++WN++++ YAQNGLA L+++
Sbjct: 184 DSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRN 243
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M V + VTL VL + A+LG +G + ++ + + ++I+MY +CG
Sbjct: 244 M-DMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCG 302
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+ A+ F+ M E+ + SWTA+I GYGMH A+ LF +MI++G+ P+ FV VLS
Sbjct: 303 NLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLS 362
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
ACSHAGL +G + M + +EPG EHY CMVDLLGRAG+LKEA LIE M +K D
Sbjct: 363 ACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDG 422
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
VWG+LLGAC+IHKNV+L E+A +++ ELEP N GY+VLLSNIY+NA + V R R +M
Sbjct: 423 AVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMM 482
Query: 520 KNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN-VKLQEVGYVTDMTSV 578
K ++L K PG S VEL+G+VH F+VGD+ H Q ++IY LEEL + +QE G
Sbjct: 483 KEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEK---- 538
Query: 579 IHDVDQEEKEMTLR--IHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
+ ++ K+ R +HSEKLA NLR+C DCH +++SK+V
Sbjct: 539 -DNREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIV 597
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
R++ VRD+ RFH+F++G CSC DYW
Sbjct: 598 HRQLTVRDATRFHHFRNGSCSCKDYW 623
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 115/230 (50%), Gaps = 22/230 (9%)
Query: 38 VFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ 97
+ SWN++++ A+ G + L + +M + P T + SC+ L G +
Sbjct: 218 LISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEF 277
Query: 98 QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA 157
+ GF + F+++ALI+MY++CG L+ A+ +FD +P+ R +VSWT+++ GY + +
Sbjct: 278 KIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE--RTLVSWTAIIGGYGMHGHG 335
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT-EGAHGF-VI 215
A+ LFKE + + D A VLSACS G+T +G F ++
Sbjct: 336 EIAVQLFKEMI------------RSGIEPDGTAFVCVLSACSHA---GLTDQGLEYFKMM 380
Query: 216 KRGFDSEVGVG--NTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
KR + E G + ++D R G + ++ + + M I+ D W +++
Sbjct: 381 KRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLG 430
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 61/147 (41%), Gaps = 12/147 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + SW ++I G A++ F M + + P + F C + +CS H+G
Sbjct: 314 MPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACS-----HAG 368
Query: 93 KQAHQQAFIFGFHRDVFVS------SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ R+ + S ++D+ + G L +A+ L + +P + V W +
Sbjct: 369 LTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAV-WGA 427
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESE 173
+L + N A L F+ + E E
Sbjct: 428 LLGACKIHKNVELAELAFERVIELEPE 454
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/622 (39%), Positives = 376/622 (60%), Gaps = 38/622 (6%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN +++ +R G ALR F ++ S P +TF + +C+ L DL + + +AF
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRALPS-SARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
G+ DVFV SAL+ +YS+CG + +A ++FD +P++ R V+W++M+ G+V EA
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDR--VAWSTMVAGFVTAGRPVEA 192
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
L ++ V D V + V+ AC + HG +++
Sbjct: 193 LAMYSRM------------REHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMR 240
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
+V +L+ YA+ GH+DV+ +VF M ++ VTW+++I+ +AQNG A EALD+F ++
Sbjct: 241 MDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFREL 300
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
C+ +SA LLA A +G L+LGK IH +++ LE I+GT+++DMY KCG
Sbjct: 301 QADGLQPCSWALVSA-LLACASVGFLKLGKSIHGFILR-RLEWQCILGTAVLDMYSKCGS 358
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
++ ARK FN++ +++ W A+IA G H +AL LF ++ + G++P++ TF S+LSA
Sbjct: 359 LESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSA 418
Query: 401 CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
SH+GLV+EG W + M EF IEP +HY C+VDLL R+G ++EA D++ M+ +
Sbjct: 419 LSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIA 478
Query: 461 VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMK 520
+W LL C +K ++LGE AKK+ EL P + G L+SN+YA A +W+ V R LMK
Sbjct: 479 IWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMK 538
Query: 521 NRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIH 580
+ K PG+SL+E++G HAF++ D+ HPQH +I + + +LN +++++GYV V H
Sbjct: 539 DSGSKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYH 598
Query: 581 DVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREI 622
D+D+++ L HSE+LA NLRVCGDCH I+ ISK+VDREI
Sbjct: 599 DLDEDQ---LLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREI 655
Query: 623 VVRDSKRFHYFKDGLCSCGDYW 644
VVRD+KRFH+FKDG CSCGDYW
Sbjct: 656 VVRDAKRFHHFKDGACSCGDYW 677
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/660 (38%), Positives = 381/660 (57%), Gaps = 68/660 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ WN++ A D V AL + M L L P TFP +K+C+ G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREG 122
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR------------------------ 128
+Q H G D++V ++LI MY K G DAR
Sbjct: 123 QQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASN 182
Query: 129 -------KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
K+FDEIP ++++VSW ++++GY + N +EAL LFKE +
Sbjct: 183 GYIXSAQKMFDEIP--VKDVVSWNALISGYAETGNYKEALELFKEMM------------K 228
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
NV D + +VLSAC++ + H ++ GF S + + N LID Y + G V+
Sbjct: 229 TNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ +F+G+ KD ++WN++I Y L EAL +F +M++S + N VT+ ++L A A
Sbjct: 289 ASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESP-NEVTMLSILPACA 347
Query: 302 HLGVLRLGKCIH---DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
HLG + +G+ IH D+ +K + + TS+IDMY KCG ++ A++ F+ M +++ S
Sbjct: 348 HLGAIDIGRWIHVYIDKRLK-GVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSS 406
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
W AMI G+ MH RA A D+F +M K G+ P+ ITFV +LSACSH+G++ G H +M
Sbjct: 407 WNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 466
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
++ I P +EHYGCM+DLLG +G KEA ++I M++ D V+W SLL AC++H NV+LG
Sbjct: 467 EDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELG 526
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
E A+ L ++EP N G +VLLSNIYA AGRW +V + R+L+ ++ + K PG S +E+
Sbjct: 527 ESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSV 586
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
VH F++GDK HP++ +IY LEE+ V L+E G+V D + V+ ++++E KE LR HSEKL
Sbjct: 587 VHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKL 646
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVC +CH +LISK+ REI+ RD RFH+F DG+CSC
Sbjct: 647 AIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 43/295 (14%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVD---VSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H +IK G + + LI+ H D + VFD + E + + WN++ +A +
Sbjct: 22 HAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHALS 81
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
AL ++ M+ S + N+ T +L A A R G+ IH V+K+ + + V
Sbjct: 82 SDPVSALYLYVCMI-SLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYV 140
Query: 328 GTSIIDMYCKCGQVDLARKAFNQ-------------------------------MKEKNV 356
TS+I MY K G+ + ARK F+Q + K+V
Sbjct: 141 HTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDV 200
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH---W 413
SW A+I+GY +EAL+LF +M+K V+P+ T V+VLSAC+ + ++ G W
Sbjct: 201 VSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSW 260
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
++ G N++ ++DL + G+++ A L EG+ K D + W +L+G
Sbjct: 261 IDDHGFGSNLKI----VNALIDLYIKCGEVETASGLFEGLSYK-DVISWNTLIGG 310
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 121/278 (43%), Gaps = 28/278 (10%)
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD---LARKAFNQMKEKNVRSWTAMIAGY 366
+ IH ++IK L + + +I+ D A F+ ++E N+ W M G+
Sbjct: 19 RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGH 78
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ AL L+ MI G+ PN TF +L AC+ + +EG GH +
Sbjct: 79 ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQ---IHGHVLKLGCD 135
Query: 427 VEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
++ Y ++ + + G+ ++A + + D V + +L+ + + +A+K
Sbjct: 136 LDLYVHTSLIAMYVKNGRXEDARKVFD-QSSHRDVVSYTALIKGYASNGYI----XSAQK 190
Query: 485 LFELEP--NNCGYHVLLSNIYANAGRW-EDVERTRSLMKNR----------RLAKTPGFS 531
+F+ P + ++ L+S YA G + E +E + +MK L+ +
Sbjct: 191 MFDEIPVKDVVSWNALISG-YAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSA 249
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
+EL +VH++ + D + KI L +L +K EV
Sbjct: 250 SIELGRQVHSW-IDDHGFGSNLKIVNALIDLYIKCGEV 286
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 255/663 (38%), Positives = 376/663 (56%), Gaps = 65/663 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHS 91
+ K N F+WN++I A G D V ++ AF M S P + TFP IK+ + + L
Sbjct: 90 IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ H A DVFV+++LI Y CG+L A K+F I ++ ++VSW SM+ G+
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK--DVVSWNSMINGF 207
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
VQ + +AL LFK+ S++V V + VLSAC+++
Sbjct: 208 VQKGSPDKALELFKKM------------ESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW-------------- 257
++ + + + + N ++D Y + G ++ ++++FD M EKD VTW
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315
Query: 258 -----------------NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
N++I+ Y QNG EAL VF ++ ++K N +TL + L A
Sbjct: 316 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSAC 375
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
A +G L LG+ IH + K + + V +++I MY KCG ++ +R+ FN +++++V W+
Sbjct: 376 AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWS 435
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
AMI G MH EA+D+FYKM +A V+PN +TF +V ACSH GLV E + M
Sbjct: 436 AMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
+ I P +HY C+VD+LGR+G L++A IE M + VWG+LLGAC+IH N++L E+
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEM 555
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
A +L ELEP N G HVLLSNIYA G+WE+V R M+ L K PG S +E+ G +H
Sbjct: 556 ACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIH 615
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE-KEMTLRIHSEKLA 599
FL GD HP EK+Y L E+ KL+ GY +++ V+ +++EE KE +L +HSEKLA
Sbjct: 616 EFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLA 675
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLRVCGDCH+V +LIS++ DREI+VRD RFH+F++G CSC
Sbjct: 676 ICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCN 735
Query: 642 DYW 644
D+W
Sbjct: 736 DFW 738
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 215/446 (48%), Gaps = 53/446 (11%)
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--Y 118
FS+ + + RS I+ C +L L KQ H G D + +S L M
Sbjct: 18 FSNPNQPTTNNERSRHISLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAAL 74
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
S L ARK+FDEIP+ N +W +++ Y + ++ F + ++ ES+C
Sbjct: 75 SSFASLEYARKVFDEIPK--PNSFAWNTLIRAYASGPDPVLSIWAFLD-MVSESQC---- 127
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
+ + ++ A + V+ + + HG +K S+V V N+LI Y G
Sbjct: 128 ------YPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD 181
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
+D + KVF + EKD V+WNS+I + Q G +AL++F +M +S DVK + VT+ VL
Sbjct: 182 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM-ESEDVKASHVTMVGVLS 240
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
A A + L G+ + + + + ++ + +++DMY KCG ++ A++ F+ M+EK+ +
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300
Query: 359 WTAMIAGYGM-------------------------------HCRAREALDLFYKM-IKAG 386
WT M+ GY + + + EAL +F+++ ++
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
++ N IT VS LSAC+ G ++ G W+++ + I ++ + + G L+++
Sbjct: 361 MKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIH 472
++ ++ K D VW +++G +H
Sbjct: 420 REVFNSVE-KRDVFVWSAMIGGLAMH 444
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 163/342 (47%), Gaps = 14/342 (4%)
Query: 211 HGFVIKRGFDSEVGVGNTL--IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
HG +I+ G S+ + L + A + ++ +RKVFD + + ++ WN++I YA
Sbjct: 50 HGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGP 109
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
++ F MV + N T ++ A A + L LG+ +H +K + V V
Sbjct: 110 DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVA 169
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
S+I Y CG +D A K F +KEK+V SW +MI G+ +AL+LF KM V+
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
+++T V VLSAC+ ++ G + + E + + M+D+ + G +++A
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYI-EENRVNVNLTLANAMLDMYTKCGSIEDAKR 288
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNN--CGYHVLLSNIYANA 506
L + M+ K D V W ++L I ++ + AA+++ P ++ L+S Y
Sbjct: 289 LFDAMEEK-DNVTWTTMLDGYAISEDYE----AAREVLNSMPQKDIVAWNALIS-AYEQN 342
Query: 507 GRWED---VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
G+ + V L KN +L + S + +V A +G
Sbjct: 343 GKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 384
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 260/663 (39%), Positives = 376/663 (56%), Gaps = 65/663 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSALHDLHS 91
+ + N+++WN++I A ++ L F M S P TFP IK+ + + L +
Sbjct: 90 IPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLA 149
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ H F D+F+S++LI YS G+L A +F +I ++ +IVSW SM++G+
Sbjct: 150 GQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEK--DIVSWNSMISGF 207
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
VQ + EAL LFK +E N + V + VLSAC++ A
Sbjct: 208 VQGGSPEEALQLFKRMKME------------NARPNRVTMVGVLSACAKRIDLEFGRWAC 255
Query: 212 GFVIKRGFDSEVGVGN-------------------------------TLIDAYARGGHVD 240
++ + G D + + N T+ID YA+ G D
Sbjct: 256 DYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYD 315
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+R+VFD M +D WN++I+ Y QNG EAL +F ++ + + K N VTL++ L A
Sbjct: 316 AARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAAC 375
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
A LG + LG IH + K ++ + + TS+IDMY KCG ++ A + F ++ ++V W+
Sbjct: 376 AQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWS 435
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
AMIAG MH R A+DLF KM + V+PN +TF ++L ACSH+GLV EG + N M
Sbjct: 436 AMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPV 495
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
+ + PG +HY CMVD+LGRAG L+EA +LIE M + VWG+LLGACRI+ NV+L E+
Sbjct: 496 YGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEM 555
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
A +L E + NN G +VLLSNIYA AG+W+ V R R MK L K PG S +E+ G +H
Sbjct: 556 ACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIH 615
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE-KEMTLRIHSEKLA 599
FLVGD HP +IY L+E+ +++ GYV+D + ++ V++E KE L +HSEKLA
Sbjct: 616 EFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLA 675
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLRVCGDCH+V +LISK+ +R+I++RD RFH+F G CSC
Sbjct: 676 IAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCM 735
Query: 642 DYW 644
DYW
Sbjct: 736 DYW 738
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 196/446 (43%), Gaps = 35/446 (7%)
Query: 211 HGFVIKRG--FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H +++ G FD A + +D + KVFD + + TWN++I +A +
Sbjct: 50 HAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSP 109
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
+ L VF QM+ + N+ T V+ A + L G+ IH V+K + +
Sbjct: 110 KPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFIS 169
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
S+I Y G +D A F+++ EK++ SW +MI+G+ EAL LF +M R
Sbjct: 170 NSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENAR 229
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
PN +T V VLSAC+ ++ G W I+ + M+D+ + G L++A
Sbjct: 230 PNRVTMVGVLSACAKRIDLEFG-RWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARR 288
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNN--CGYHVLLSNIYANA 506
L + M+ K D V W +++ + D AA+++F++ P ++ L+S+ N
Sbjct: 289 LFDKMEEK-DIVSWTTMIDGYAKVGDYD----AARRVFDVMPREDITAWNALISSYQQNG 343
Query: 507 GRWEDVERTRSLMKNRR-----------LAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
E + R L N+ LA ++L G +H ++ Q K+
Sbjct: 344 KPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYI-----KKQGIKL 398
Query: 556 -YEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLANLRVCGDCHTVIRLI 614
+ L + G++ V + V++ + + + S +A L + G I L
Sbjct: 399 NFHITTSLIDMYSKCGHLEKALEVFYSVERRD----VFVWSAMIAGLAMHGHGRAAIDLF 454
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSC 640
SK+ +E V+ + F + LC+C
Sbjct: 455 SKM--QETKVKPNAV--TFTNLLCAC 476
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/635 (40%), Positives = 377/635 (59%), Gaps = 68/635 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ DKN VF +N +I G +AL F +M P T+PC +K+CS
Sbjct: 93 IFDEITDKNVVF-FNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSG 151
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L G Q H G ++++ + L+ MY KC L AR++ DE+P R ++VSW SM
Sbjct: 152 NLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGR--DMVSWNSM 209
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY QN +AL L +E +E+ + + D+ + S+L A
Sbjct: 210 VAGYAQNGRFNDALKLCRE--MEDLK----------LKPDAGTMGSLLPA---------- 247
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
V NT D +V + +F + EK ++WN +IA+Y N
Sbjct: 248 -----------------VTNTSCD------NVLYVKDMFVKLKEKSLISWNVMIAVYVNN 284
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+ EA+D++ QM + V+ +AV++S+VL A L LG+ IH+ V + L ++++
Sbjct: 285 AMPNEAVDLYLQM-QVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLL 343
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++IDMY KCG + AR F+QM ++V SWT+MI+ YGM + ++A+ LF KM +G
Sbjct: 344 ENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGF 403
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P++I FVSVL+ACSHAGLV EG + N M E+ I PG+EHY CMVDLLGRAGK+ EAY
Sbjct: 404 TPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDLLGRAGKIDEAY 462
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
L M ++ + VWGSLL ACR++ ++++ +AA LF+L P GY+VLLSNIYA AG
Sbjct: 463 HLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAG 522
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RW+DVE RS+M ++ + K PG S VE+ V+ FL GD+ H Q ++IY+ L L +++
Sbjct: 523 RWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMK 582
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E+GY+ + S +HDV++E+KE L +HSEKLA N+RVCGDCH
Sbjct: 583 ELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHV 642
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LISK+ +REI++RD+ RFH+F+DG+CSCGDYW
Sbjct: 643 ATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 192/433 (44%), Gaps = 62/433 (14%)
Query: 44 VIADLARGGDSVEALRAFS-SMRKLSLTP--TRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
I+ L+R + + + FS + +K L+P T T K D + K+ H +
Sbjct: 3 TISSLSRQFSTAKQTKPFSLTTQKPQLSPKFTALTEDLCNKILDVNPDAKTLKKLHSKIL 62
Query: 101 I-FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
I H + + L+ Y+ CGE R +FDEI +N+V + M+ YV N ++
Sbjct: 63 IDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITD--KNVVFFNVMIRSYVNNGLYQD 120
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
ALL+FK + + D+ VL ACS V HG V+K G
Sbjct: 121 ALLVFKTMA------------NQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGL 168
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
D + +GN L+ Y + +D +R+V D M +D V+WNS++A YAQNG +AL + +
Sbjct: 169 DMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCRE 228
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M + +K +A T+ ++L A+ + C
Sbjct: 229 M-EDLKLKPDAGTMGSLLPAVTN---------------------------------TSCD 254
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
V + F ++KEK++ SW MIA Y + EA+DL+ +M GV P+ ++ SVL
Sbjct: 255 NVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLP 314
Query: 400 ACSHAGLVQEGWHWLNTMGHEF----NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
AC G HE+ + P + ++D+ + G LKEA + + M
Sbjct: 315 ACGDLSAAVLGRRI-----HEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMF 369
Query: 456 KADFVVWGSLLGA 468
+ D V W S++ A
Sbjct: 370 R-DVVSWTSMISA 381
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 27/293 (9%)
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+I + +G L+ AYA G +R +FD + +K+ V +N +I Y NGL +
Sbjct: 61 ILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQD 120
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL VF M N T VL A + G L +G IH V+K+ L+ ++ +G ++
Sbjct: 121 ALLVFKTMANQGFYPDN-YTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLV 179
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
MY KC +D AR+ ++M +++ SW +M+AGY + R +AL L +M ++P+
Sbjct: 180 SMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAG 239
Query: 393 TFVSVLSA-----CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
T S+L A C + V++ + L E + + M+ + EA
Sbjct: 240 TMGSLLPAVTNTSCDNVLYVKDMFVKLK--------EKSLISWNVMIAVYVNNAMPNEAV 291
Query: 448 DLIEGMK---VKADFVVWGSLLGAC----------RIHKNVDLGEIAAKKLFE 487
DL M+ V+ D V S+L AC RIH+ V+ ++ L E
Sbjct: 292 DLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLE 344
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/627 (39%), Positives = 372/627 (59%), Gaps = 33/627 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSALHDLHSGKQA 95
+V +WNS++ AL++++ M + S P R TFP +K C+ L + GK
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H Q + H D+++ + L++MY+ CG+L AR LF+ + R N V WTSM++GY++N
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHR--NKVVWTSMISGYMKNH 159
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
EALLL+K+ +EE D D V +A+++SAC+ + GV H +
Sbjct: 160 CPNEALLLYKK--MEE----------DGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+ +G+ L++ YA+ G + +R+VFD + +KD W+++I Y +N + EAL
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQ 267
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F ++ ++++ N VT+ AV+ A A LG L G+ +HD + + SV + S+IDM+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG +D A++ F+ M K++ SW +M+ G+ +H REAL F M ++P+ ITF+
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFI 387
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
VL+ACSHAGLVQEG + + + EHYGCMVDLL RAG L EA + I M +
Sbjct: 388 GVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPL 447
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
+ D +WGS+LGACR++ N++LGE AA+ L +LEP N G ++LLSNIYA W +V++
Sbjct: 448 QPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKV 507
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
R LM + + KTPG S V + H+FL GD HP+ +I L ++ KL+ GYV D
Sbjct: 508 RELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADT 567
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
+ V+ ++D +KE ++ HSEKLA NLRVC DCHT+I+L+SK+
Sbjct: 568 SEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKI 627
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
R+I +RD RFH+FKDG CSC DYW
Sbjct: 628 YQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 117/228 (51%), Gaps = 2/228 (0%)
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
V + VF E D +TWNS++ + + + AL + +M++ + + T ++L
Sbjct: 28 VGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
A L ++GK +H QV+K L + + T++++MY CG + AR F +M +N
Sbjct: 88 GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
WT+MI+GY + EAL L+ KM + G P+ +T +++SAC+ + G L++
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMK-LHSHI 206
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
E +++ +V++ + G LK A + + + K D W +L+
Sbjct: 207 REMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDK-DVYAWSALI 253
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/626 (38%), Positives = 371/626 (59%), Gaps = 33/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SW ++A A ++L+ F+ MR + P TF +K+C L GK H
Sbjct: 106 DMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVH 165
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+ D++V L+D+Y+K G+ +D ++F+E+P+ +++ W+ M++ Y Q++
Sbjct: 166 GCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKH--DVIPWSFMISRYAQSNQ 223
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+REA+ LF + V + ASVL +C+ + + + H V+K
Sbjct: 224 SREAVELFGQM------------RRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLK 271
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G D V V N L+D YA+ G +D S K+F + ++ VTWN++I Y Q+G +AL +
Sbjct: 272 VGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSL 331
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
+ M++ V+ + VT S+VL A A L + LG IH +K ++ V+VG ++IDMY
Sbjct: 332 YKNMLE-CQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYA 390
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG + AR F+ + E++ SW AMI+GY MH EAL F M + PN +TFVS
Sbjct: 391 KCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVS 450
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+LSACS+AGL+ G ++ +M ++ IEP +EHY CMV LLGR+G L +A LIE + ++
Sbjct: 451 ILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLE 510
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
+ VW +LLGAC IH +VDLG ++A+++ +++P + HVLLSNIYA RW V R
Sbjct: 511 PNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVR 570
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
MKN+ + K PG S +E +G VH F VGD HP + I LE LN+K ++ GYV D+
Sbjct: 571 KFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLN 630
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
+V+ DV+ +EK+ L +HSE+LA NLR+C DCH+ I+LISK+V
Sbjct: 631 AVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIV 690
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
R+I++RD RFH+F+DG+CSCGDYW
Sbjct: 691 QRDIIIRDMNRFHHFQDGICSCGDYW 716
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 191/339 (56%), Gaps = 17/339 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K++V W+ +I+ A+ S EA+ F MR+ + P + TF ++SC+++ +L G
Sbjct: 203 MPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLG 262
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H G +VFVS+AL+D+Y+KCG L ++ KLF E+P RN V+W +M+ GYV
Sbjct: 263 KQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPN--RNEVTWNTMIVGYV 320
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+ + +AL L+K L EC V V +SVL AC+ + + H
Sbjct: 321 QSGDGDKALSLYKNML----EC--------QVQASEVTYSSVLRACASLAAMELGTQIHS 368
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+K +D +V VGN LID YA+ G + +R VFD + E+D ++WN++I+ Y+ +GL E
Sbjct: 369 LSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGE 428
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSI 331
AL F QM++ T+ N +T ++L A ++ G+L +G+ +++ +E + T +
Sbjct: 429 ALKAF-QMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCM 487
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+ + + G +D A K ++ E NV+ W A++ +H
Sbjct: 488 VWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIH 526
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 219/414 (52%), Gaps = 20/414 (4%)
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H + G + FV +ALID Y+ CG ++ AR+ FD I +++VSWT M+ Y +ND
Sbjct: 64 HACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIA--CKDMVSWTGMVACYAEND 121
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+++L LF E + G + N A VL AC + V + HG V+
Sbjct: 122 RFQDSLQLFAEMRMV-----GFNPN-------HFTFAGVLKACIGLEAFSVGKSVHGCVL 169
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
K ++ ++ VG L+D Y + G + +VF+ M + D + W+ +I+ YAQ+ + EA++
Sbjct: 170 KTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVE 229
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F QM ++ V N T ++VL + A + L+LGK +H V+K+ L+ +V V +++D+Y
Sbjct: 230 LFGQMRRAF-VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVY 288
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG++D + K F ++ +N +W MI GY +AL L+ M++ V+ + +T+
Sbjct: 289 AKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYS 348
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
SVL AC+ ++ G ++++ + + V ++D+ + G +K A L+ M
Sbjct: 349 SVLRACASLAAMELGTQ-IHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNA-RLVFDMLS 406
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE--PNNCGYHVLLSNIYANAG 507
+ D + W +++ +H V A + + E E PN + +LS +NAG
Sbjct: 407 ERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSAC-SNAG 459
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 15/328 (4%)
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
RN VS+ +++ GYVQ+ E + LF E E N FV ++L
Sbjct: 4 RNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHEL--------NPFV----FTTILKLL 51
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
V + H + K G +S VG LIDAYA G V+ +R+ FD + KD V+W
Sbjct: 52 VSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWT 111
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
++A YA+N ++L +F +M + N T + VL A L +GK +H V+K
Sbjct: 112 GMVACYAENDRFQDSLQLFAEM-RMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLK 170
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
E + VG ++D+Y K G + + F +M + +V W+ MI+ Y ++REA++L
Sbjct: 171 TCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVEL 230
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
F +M +A V PN TF SVL +C+ +Q G ++ + ++ V ++D+
Sbjct: 231 FGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQ-VHCHVLKVGLDGNVFVSNALMDVYA 289
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ G+L + L + + + V W +++
Sbjct: 290 KCGRLDNSMKLFMELPNRNE-VTWNTMI 316
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 1/153 (0%)
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M +++ V++ ++I Y Q+ E +D+F + V + N + +L + + L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSR-VHREGHELNPFVFTTILKLLVSVECAEL 59
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
+H + K+ E + VGT++ID Y CG V+ AR+AF+ + K++ SWT M+A Y
Sbjct: 60 AYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAE 119
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ R +++L LF +M G PN+ TF VL AC
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKAC 152
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 14/230 (6%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N +F+ +++ + SWN++I+ + G EAL+AF M++ P + TF + +C
Sbjct: 397 NARLVFDMLSERDEI-SWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSAC 455
Query: 84 SALHDLHSGKQAHQQAFI-FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
S L G+ + +G + + ++ + + G L A KL +EIP N+
Sbjct: 456 SNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLE-PNVK 514
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
W ++L V +++ ++ ++ L + + N++ + SV S +
Sbjct: 515 VWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMK 574
Query: 203 VNGV-TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
GV E ++ +G VG+T H D+ K+ GM+E
Sbjct: 575 NKGVKKEPGLSWIENQGIVHYFSVGDT--------SHPDM--KMISGMLE 614
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/628 (39%), Positives = 368/628 (58%), Gaps = 33/628 (5%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K +V ++N +I A+ GD +A + F M++ P R +F + CS L GK
Sbjct: 225 KRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKA 284
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H Q G DV V++ALI MY CG + AR++FD++ ++R++VSWT M+ GY +N
Sbjct: 285 VHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKM--KVRDVVSWTVMIRGYAEN 342
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
N +A LF A+ + + D + +++AC+ + H V
Sbjct: 343 SNIEDAFGLF------------ATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQV 390
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
++ GF +++ V L+ YA+ G + +R+VFD M +D V+W+++I Y +NG EA
Sbjct: 391 VRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAF 450
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+ F ++K +V+ + VT +L A HLG L LG I+ Q IK DL + VG ++I+M
Sbjct: 451 ETF-HLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINM 509
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
K G ++ AR F M +++V +W MI GY +H AREALDLF +M+K RPN +TF
Sbjct: 510 NVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTF 569
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
V VLSACS AG V+EG + + + I P +E YGCMVDLLGRAG+L EA LI M
Sbjct: 570 VGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMP 629
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
+K + +W +LL ACRI+ N+D+ E AA++ EP + +V LS++YA AG WE+V +
Sbjct: 630 LKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAK 689
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTD 574
R +M++R + K G + +E+ GK+H F+V D+ HPQ +IY L L ++ GY+
Sbjct: 690 VRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPV 749
Query: 575 MTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISK 616
+V+H+V ++EKE + HSEKLA NLRVCGDCH+ + ISK
Sbjct: 750 TQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISK 809
Query: 617 VVDREIVVRDSKRFHYFKDGLCSCGDYW 644
V REI+ RD+ RFH+FK+G+CSCGDYW
Sbjct: 810 VTGREIIARDASRFHHFKNGVCSCGDYW 837
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 243/495 (49%), Gaps = 24/495 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V+ V +WN++IA A+ G EA F M ++ P+ TF + +CS+ L G
Sbjct: 122 VENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLG 181
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H Q GF D + +AL+ MY K G + AR++FD + + R++ ++ M+ GY
Sbjct: 182 KEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYK--RDVSTFNVMIGGYA 239
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
++ + +A LF E G N ++ S+L CS + H
Sbjct: 240 KSGDGEKAFQLFYRMQQE-----GFKPN-------RISFLSILDGCSTPEALAWGKAVHA 287
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ G +V V LI Y G ++ +R+VFD M +D V+W +I YA+N +
Sbjct: 288 QCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIED 347
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A +F M + ++ + +T ++ A A L L + IH QV++ ++V T+++
Sbjct: 348 AFGLFATM-QEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALV 406
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
MY KCG + AR+ F+ M ++V SW+AMI Y + EA + F+ M + V P+ +
Sbjct: 407 HMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVV 466
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
T++++L+AC H G + G + T + ++ + ++++ + G ++ A + E
Sbjct: 467 TYINLLNACGHLGALDLGME-IYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFEN 525
Query: 453 MKVKADFVVWGSLLGACRIHKN----VDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
M V+ D V W ++G +H N +DL + K+ F PN+ + +LS + AG
Sbjct: 526 M-VQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERF--RPNSVTFVGVLSAC-SRAGF 581
Query: 509 WEDVERTRSLMKNRR 523
E+ R S + + R
Sbjct: 582 VEEGRRFFSYLLDGR 596
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 209/405 (51%), Gaps = 39/405 (9%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
T+ + C L D GKQ G +++ + LI ++S CG + +AR+ FD +
Sbjct: 63 TYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSV 122
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
+ +V+W +++ GY Q + +EA LF++ + E A E S F+ V
Sbjct: 123 EN--KTVVTWNAIIAGYAQLGHVKEAFALFRQMVDE------AMEPSIITFL------IV 168
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
L ACS + + H VIK GF S+ +G L+ Y +GG +D +R+VFDG+ ++D
Sbjct: 169 LDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDV 228
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
T+N +I YA++G +A +F +M + K N ++ ++L + L GK +H
Sbjct: 229 STFNVMIGGYAKSGDGEKAFQLFYRM-QQEGFKPNRISFLSILDGCSTPEALAWGKAVHA 287
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
Q + L + V V T++I MY CG ++ AR+ F++MK ++V SWT MI GY + +
Sbjct: 288 QCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIED 347
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGWHWLNTMGHEFNI 423
A LF M + G++P+ IT++ +++AC+ H+ +V+ G+ G + +
Sbjct: 348 AFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGF------GTDLLV 401
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ + H + + G +K+A + + M + D V W +++GA
Sbjct: 402 DTALVH------MYAKCGAIKDARQVFDAMS-RRDVVSWSAMIGA 439
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 158/320 (49%), Gaps = 14/320 (4%)
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+DS + C + G+ + +I+ G + NTLI ++ G++ +R+
Sbjct: 59 IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD + K VTWN+IIA YAQ G EA +F QMV ++ + +T VL A +
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEA-MEPSIITFLIVLDACSSPAG 177
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L+LGK H QVIK+ +GT+++ MY K G +D AR+ F+ + +++V ++ MI G
Sbjct: 178 LKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGG 237
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y +A LFY+M + G +PN I+F+S+L CS E W + H +
Sbjct: 238 YAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCS----TPEALAWGKAV-HAQCMNT 292
Query: 426 G----VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD--LGE 479
G V ++ + G ++ A + + MKV+ D V W ++ + N++ G
Sbjct: 293 GLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVR-DVVSWTVMIRGYAENSNIEDAFGL 351
Query: 480 IAAKKLFELEPNNCGY-HVL 498
A + ++P+ Y H++
Sbjct: 352 FATMQEEGIQPDRITYIHII 371
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/629 (39%), Positives = 373/629 (59%), Gaps = 33/629 (5%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D+ NV WN ++ + D ++ F M + P + T+PC +++C+ ++ G+
Sbjct: 306 DRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGE 365
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H GF D++VS LIDMYSK G L A+++ D I ++ ++VSWTSM+ GYVQ
Sbjct: 366 QIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEK--DVVSWTSMIAGYVQ 423
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
++ +EAL FKE CG ++ D++ +AS +SAC+ + H
Sbjct: 424 HEFCKEALETFKEM----QACG--------IWPDNIGLASAISACAGIKAVHQGSQIHAR 471
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V G+ ++V + N L+ YAR G + F+ + K+ +TWN +I+ +AQ+GL EA
Sbjct: 472 VYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEA 531
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L VF +M ++ K N T + + A A+L ++ GK IH +VIK + ++I
Sbjct: 532 LKVFMKMDQA-GAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALIS 590
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
+Y KCG ++ A+ F +M ++N SW +I H R EALDLF +M + G++P+ +T
Sbjct: 591 LYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVT 650
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
FV VL+ACSH GLV+EG + +M +E I P +HY C+VD+LGRAG+L A +E M
Sbjct: 651 FVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEM 710
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
+ AD +VW +LL AC++HKN+++GE AAK L ELEP++ +VLLSN YA G+W +
Sbjct: 711 PIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRD 770
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
+ R +MK+R + K PG S +E++ VHAF VGD+ HP ++IY +L LN +L ++GY
Sbjct: 771 QIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQ 830
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
+ + H+ ++E K+ T +HSEKLA NLRVC DCHT ++ S
Sbjct: 831 ENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMKFTS 890
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
V+ REIV+RD RFH+F +G CSCGDYW
Sbjct: 891 GVMGREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 141/483 (29%), Positives = 245/483 (50%), Gaps = 47/483 (9%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK------ 93
S+N +A D + L F++ + + F CA+++C SG+
Sbjct: 8 SFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRG-----SGRRWPLVP 62
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
+ H +A I G + + LID+Y+K G + AR++F+E+ +R+ VSW ++L+GY Q
Sbjct: 63 EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELS--VRDNVSWVAVLSGYAQ 120
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N EA+ L++E + V ++S+LSAC++ + + H
Sbjct: 121 NGLGEEAVRLYREM------------HRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQ 168
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V K+GF SE VGN LI Y R ++ +VF M+ D+VT+N++I+ +AQ G A
Sbjct: 169 VYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRA 228
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L +FD+M + + + ++VT++++L A + +G LR GK +H ++K + I+ S++D
Sbjct: 229 LGIFDEM-QLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLD 287
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
+Y K G ++ A + F+ NV W M+ YG ++ D+FY+M+ AGVRPN T
Sbjct: 288 LYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFT 347
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDL 449
+ +L C+H G + L H I+ G + G ++D+ + G L +A +
Sbjct: 348 YPCMLRTCTHTGEIG-----LGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRI 402
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE-----PNNCGYHVLLSNIYA 504
++ ++ K D V W S++ H + + A + E++ P+N G L S I A
Sbjct: 403 LDMIEEK-DVVSWTSMIAGYVQH---EFCKEALETFKEMQACGIWPDNIG---LASAISA 455
Query: 505 NAG 507
AG
Sbjct: 456 CAG 458
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 170/339 (50%), Gaps = 17/339 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+++ +V SW S+IA + EAL F M+ + P AI +C+ + +H G
Sbjct: 406 IEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQG 465
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H + ++ G+ DV + + L+ +Y++CG +A F+ I + ++W +++G+
Sbjct: 466 SQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEH--KEGITWNGLISGFA 523
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+ EAL +F + + GA N FV S++ ++ L+ + + H
Sbjct: 524 QSGLYEEALKVFMKM-----DQAGAKYNV-FTFVSSISASANLADIKQ------GKQIHA 571
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
VIK G+ SE + N LI Y + G ++ ++ F M +++ V+WN+II +Q+G E
Sbjct: 572 RVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLE 631
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESVIVGTSI 331
ALD+FDQM K +K + VT VL A +H+G++ G C + + + +
Sbjct: 632 ALDLFDQM-KQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACV 690
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+D+ + GQ+D A++ +M + W +++ +H
Sbjct: 691 VDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVH 729
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 251/626 (40%), Positives = 367/626 (58%), Gaps = 39/626 (6%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
WN+ + +LA+ ++AL + M + P TFP A+KSC+AL G Q H Q
Sbjct: 7 PWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQI 66
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G + FV + LI MY K + +ARK+F+E + V + ++++GYV N +
Sbjct: 67 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSD 126
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+LLF++ N + V V+SV + ++ AC + H +K GF
Sbjct: 127 AVLLFRQM------------NEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGF 174
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
DS+V V N I Y + G V+ ++K+FD M K ++WN++++ YAQNGLA L+++
Sbjct: 175 DSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRN 234
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M V + VTL VL + A+LG +G + ++ + + ++I+MY +CG
Sbjct: 235 M-DMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCG 293
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+ A+ F+ M E+ + SWTA+I GYGMH A+ LF +MI++G+ P+ FV VLS
Sbjct: 294 NLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLS 353
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
ACSHAGL +G + M + +EPG EHY CMVDLLGRAG+LKEA LIE M +K D
Sbjct: 354 ACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDG 413
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
VWG+LLGAC+IHKNV+L E+A +++ ELEP N GY+VLLSNIY+NA + V R R +M
Sbjct: 414 AVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMM 473
Query: 520 KNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN-VKLQEVGYVTDMTSV 578
K ++L K PG S VEL+G+VH F+VGD+ H Q ++IY LEEL + +QE G
Sbjct: 474 KEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEK---- 529
Query: 579 IHDVDQEEKEMTLR--IHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
+ ++ K+ R +HSEKLA NLR+C DCH +++SK+V
Sbjct: 530 -DNREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIV 588
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
R++ VRD+ RFH+F++G CSC DYW
Sbjct: 589 HRQLTVRDATRFHHFRNGSCSCKDYW 614
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 115/230 (50%), Gaps = 22/230 (9%)
Query: 38 VFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ 97
+ SWN++++ A+ G + L + +M + P T + SC+ L G +
Sbjct: 209 LISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEF 268
Query: 98 QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA 157
+ GF + F+++ALI+MY++CG L+ A+ +FD +P+ R +VSWT+++ GY + +
Sbjct: 269 KMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE--RTLVSWTAIIGGYGMHGHG 326
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT-EGAHGF-VI 215
A+ LFKE + + D A VLSACS G+T +G F ++
Sbjct: 327 EIAVQLFKEMI------------RSGIEPDGTAFVCVLSACSHA---GLTDQGLEYFKMM 371
Query: 216 KRGFDSEVGVG--NTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
KR + E G + ++D R G + ++ + + M I+ D W +++
Sbjct: 372 KRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLG 421
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 61/147 (41%), Gaps = 12/147 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + SW ++I G A++ F M + + P + F C + +CS H+G
Sbjct: 305 MPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACS-----HAG 359
Query: 93 KQAHQQAFIFGFHRDVFVS------SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ R+ + S ++D+ + G L +A+ L + +P + V W +
Sbjct: 360 LTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAV-WGA 418
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESE 173
+L + N A L F+ + E E
Sbjct: 419 LLGACKIHKNVELAELAFERVIELEPE 445
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/637 (38%), Positives = 381/637 (59%), Gaps = 33/637 (5%)
Query: 27 TLFNKYVDKN-NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
TLFN ++ ++ +WN++IA + + + + + M++ +TP ST + +
Sbjct: 163 TLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQ 222
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ LH GK H F +V + +AL+DMY+KC L ARK+F+ + ++ N V W+
Sbjct: 223 ANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKK--NDVCWS 280
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M+ GYV +D+ +AL L+ + L C + +A++L AC+++T
Sbjct: 281 AMIGGYVLHDSISDALALYDDML-----CIYGLNPT------PATLATMLRACAQLTDLK 329
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H +IK G D + VGN+LI YA+ G +D + D MI KD V++++II+
Sbjct: 330 RGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCV 389
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QNG A +AL +F QM +S+ + T+ A+L A +HL L+ G C H +
Sbjct: 390 QNGYAEKALLIFRQM-QSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDT 448
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+ +IIDMY KCG++ ++R+ F++M+ +++ SW MI GYG+H EAL LF ++
Sbjct: 449 SICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQAL 508
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G++P+ +T ++VLSACSH+GLV EG +W ++M FNI+P + HY CMVDLL RAG L E
Sbjct: 509 GLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDE 568
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
AY I+ M + +WG+LL ACR HKN+++GE +KK+ L P G VL+SNIY++
Sbjct: 569 AYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSS 628
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
GRW+D RS+ ++ K+PG S VE+ G +H F+ G + HPQ I + L+EL V+
Sbjct: 629 VGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQ 688
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++++GY D + V+HDV++EEKE L HSEK+A NLR+C DC
Sbjct: 689 MKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDC 748
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H+ I+ I+ + +REI VRD+ RFH+FKDG+C+C D+W
Sbjct: 749 HSAIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 228/444 (51%), Gaps = 22/444 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K +V WN +I A G +++ + M +L +TPT TFP +K+CS+L L G
Sbjct: 67 IPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLG 126
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H A I G D++VS+AL+ MY+KCG L A+ LF+ I + R+IV+W +M+ +
Sbjct: 127 RLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAF- 185
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ AL + + + G + NS + S+L + + H
Sbjct: 186 ----SFHALHAQTIHSVAQMQQAGVTPNSST-------LVSILPTIGQANALHQGKAIHA 234
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ I+ F V + L+D YA+ + +RK+F+ + +K+ V W+++I Y + ++
Sbjct: 235 YYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISD 294
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL ++D M+ + TL+ +L A A L L+ GK +H +IK ++ VG S+I
Sbjct: 295 ALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLI 354
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
MY KCG +D A ++M K+ S++A+I+G + A +AL +F +M +G+ P
Sbjct: 355 SMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLE 414
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYD 448
T +++L ACSH +Q G T H + + G + ++D+ + GK+ + +
Sbjct: 415 TMIALLPACSHLAALQHG-----TCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISRE 469
Query: 449 LIEGMKVKADFVVWGSLLGACRIH 472
+ + M+ + D + W +++ IH
Sbjct: 470 IFDRMQNR-DIISWNTMIIGYGIH 492
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 116/243 (47%), Gaps = 13/243 (5%)
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
+ ++R VFD + + V WN +I YA +G +++ ++ M++ N T +L
Sbjct: 57 IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTN-FTFPFLLK 115
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM--KEKNV 356
A + L L+LG+ IH + L + V T+++ MY KCG + A+ FN + +++++
Sbjct: 116 ACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDI 175
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+W AMIA + H + + +M +AGV PN T VS+L A + +G
Sbjct: 176 VAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQG-----K 230
Query: 417 MGHEFNIE----PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
H + I V ++D+ + L A + + K D V W +++G +H
Sbjct: 231 AIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKND-VCWSAMIGGYVLH 289
Query: 473 KNV 475
++
Sbjct: 290 DSI 292
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
++ LAR F+Q+ + +V W MI Y ++++ L+ M++ GV P TF +L
Sbjct: 56 EIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLK 115
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK-AD 458
ACS +Q G ++T H + + ++ + + G L +A L + + D
Sbjct: 116 ACSSLQALQLG-RLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRD 174
Query: 459 FVVWGSLLGACRIH 472
V W +++ A H
Sbjct: 175 IVAWNAMIAAFSFH 188
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 248/629 (39%), Positives = 371/629 (58%), Gaps = 65/629 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV +N +I +AL F M +P T+PC +K+CS +L G
Sbjct: 93 IPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIG 152
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H F G ++FV + LI +Y KCG L +AR + DE+ + +++VSW SM+ GY
Sbjct: 153 LQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEM--QSKDVVSWNSMVAGYA 210
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN +AL + +E G + D + +AS+L A + + V
Sbjct: 211 QNMQFDDALDICREM-------DGVRQKPD-----ACTMASLLPAVTNTSSENVL----- 253
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++F + +K V+WN +I++Y +N + +
Sbjct: 254 ----------------------------YVEEMFMNLEKKSLVSWNVMISVYMKNSMPGK 285
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
++D++ QM K +V+ +A+T ++VL A L L LG+ IH+ V + L ++++ S+I
Sbjct: 286 SVDLYLQMGK-CEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLI 344
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY +CG ++ A++ F++MK ++V SWT++I+ YGM + A+ LF +M +G P+ I
Sbjct: 345 DMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSI 404
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
FV++LSACSH+GL+ EG + M ++ I P +EH+ C+VDLLGR+G++ EAY++I+
Sbjct: 405 AFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQ 464
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M +K + VWG+LL +CR++ N+D+G +AA KL +L P GY+VLLSNIYA AGRW +V
Sbjct: 465 MPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEV 524
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
RSLMK RR+ K PG S VEL +VH FL GD HPQ ++IYE L L K++E+GYV
Sbjct: 525 TAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYV 584
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------NLRVCGDCHTVIRLIS 615
S +HDV++E+KE L +HSEKLA NLRVCGDCH +LIS
Sbjct: 585 PKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQESPIRITKNLRVCGDCHIAAKLIS 644
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
K+V REIV+RD+ RFH+FKDG+CSCGDYW
Sbjct: 645 KIVQREIVIRDTNRFHHFKDGICSCGDYW 673
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 185/413 (44%), Gaps = 60/413 (14%)
Query: 62 SSMRKLSLTPTRSTFPCAI--KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
SS+RK ++P + K D+ + K H + F FH + + L+ Y+
Sbjct: 19 SSIRKSLVSPQNPVLVLELLGKVLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYA 78
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
GE AR +FD IP+ RN++ + M+ Y+ N +ALL+F++ + GG S
Sbjct: 79 ARGEPGLARNVFDVIPE--RNVIFYNVMIRSYMNNHLYDDALLVFRDMV-----SGGFSP 131
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
D VL ACS + HG V K G D + VGN LI Y + G +
Sbjct: 132 -------DHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCL 184
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+R V D M KD V+WNS++A YAQN +ALD+ +M K +A T++++L A
Sbjct: 185 PEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREM-DGVRQKPDACTMASLLPA 243
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
+ + E+V+ + F +++K++ SW
Sbjct: 244 VTNTS-----------------SENVL----------------YVEEMFMNLEKKSLVSW 270
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
MI+ Y + +++DL+ +M K V P+ IT SVL AC + G H
Sbjct: 271 NVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRI-----H 325
Query: 420 EF----NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
E+ + P + ++D+ R G L++A + + MK + D W SL+ A
Sbjct: 326 EYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFR-DVASWTSLISA 377
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 156/332 (46%), Gaps = 28/332 (8%)
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H V F +G L+ AYA G ++R VFD + E++ + +N +I Y N
Sbjct: 52 KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNN 111
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
L +AL VF MV S + T VL A + LR+G +H V K+ L+ ++ V
Sbjct: 112 HLYDDALLVFRDMV-SGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFV 170
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G +I +Y KCG + AR ++M+ K+V SW +M+AGY + + +ALD+ +M
Sbjct: 171 GNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQ 230
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE-PGVEHYGCMVDLLGRAGKLKEA 446
+P+ T S+L A ++ E ++ M N+E + + M+ + + ++
Sbjct: 231 KPDACTMASLLPAVTNTS--SENVLYVEEMF--MNLEKKSLVSWNVMISVYMKNSMPGKS 286
Query: 447 YDLIEGM---KVKADFVVWGSLLGAC----------RIHKNVDLGEIAAKKLFELEPNNC 493
DL M +V+ D + S+L AC RIH+ V+ ++ L E
Sbjct: 287 VDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENS---- 342
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLA 525
L ++YA G ED +R MK R +A
Sbjct: 343 -----LIDMYARCGCLEDAKRVFDRMKFRDVA 369
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/642 (39%), Positives = 380/642 (59%), Gaps = 44/642 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL--SLTPTRSTFPCAIKSCSALHDLH 90
+ ++ +WN+++A A G A+ SM+ L P ST + + L
Sbjct: 71 MPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALA 130
Query: 91 SGKQAHQQAFIFGFHRD----------VFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
G H H + V + +AL+DMY+KCG L AR++FD +P R N
Sbjct: 131 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR--N 188
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
V+W++++ G+V +A LLFK +L + C F+ +IAS L AC+
Sbjct: 189 EVTWSALIGGFVLCSRMTQAFLLFKA-MLAQGLC----------FLSPTSIASALRACAS 237
Query: 201 VTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSI 260
+ + E H + K G +++ GN+L+ YA+ G +D + +FD M KD V+++++
Sbjct: 238 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 297
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
++ Y QNG A EA VF +M ++ +V+ +A T+ +++ A +HL L+ G+C H VI
Sbjct: 298 VSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
L + ++IDMY KCG++DL+R+ FN M +++ SW MIAGYG+H +EA LF
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+M G P+ +TF+ +LSACSH+GLV EG HW + MGH + + P +EHY CMVDLL R
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 476
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
G L EAY+ I+ M ++AD VW +LLGACR++KN+DLG+ ++ + EL P G VLLS
Sbjct: 477 GFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLS 536
Query: 501 NIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLE 560
NIY+ AGR+++ R + K + K+PG S +E+ G +HAF+ GD+ HPQ +IY L+
Sbjct: 537 NIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELD 596
Query: 561 ELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLR 602
+ V ++++GY D + V+ D+++EEKE L HSEKLA NLR
Sbjct: 597 NILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLR 656
Query: 603 VCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
VCGDCHTVI+ IS V R I+VRD+ RFH+FK+G CSCGD+W
Sbjct: 657 VCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 219/448 (48%), Gaps = 41/448 (9%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M + + P TFP A+K+CSAL D H G+ H+ A G D+FVS+AL+DMY KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L DA +F +P R++V+W +ML GY + A+ L + + N+
Sbjct: 61 LPDAAHIFATMPA--RDLVAWNAMLAGYAHHGMYHHAV---AHLLSMQMQMHRLRPNAST 115
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGA--HGFVI----------KRGFDSEVGVGNTLID 231
+ VA+ +L+ + +G H + I K V +G L+D
Sbjct: 116 L----VALLPLLA-----QQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLD 166
Query: 232 AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
YA+ G + +R+VFD M ++ VTW+++I + +A +F M+ +
Sbjct: 167 MYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 226
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
++++ L A A L LR+G+ +H + K + + G S++ MY K G +D A F++M
Sbjct: 227 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 286
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
K+ S++A+++GY + RA EA +F KM V P+ T VS++ ACSH +Q G
Sbjct: 287 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG- 345
Query: 412 HWLNTMGHEFNIEPGV--EHYGC--MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
H I G+ E C ++D+ + G++ + + M + D V W +++
Sbjct: 346 ----RCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIA 400
Query: 468 ACRIHKNVDLGEIAAKKLFELEPNNCGY 495
IH LG+ A LF LE NN G+
Sbjct: 401 GYGIH---GLGK-EATALF-LEMNNLGF 423
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L+ +S+ + + ++ +L+ + ++ SWN++IA G EA F
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ-AHQQAFIFGFHRDVFVSSALIDMYSKC 121
M L P TF C + +CS + GK H +G + ++D+ S+
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 476
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSML 148
G L +A + +P R ++ W ++L
Sbjct: 477 GFLDEAYEFIQSMPLR-ADVRVWVALL 502
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/661 (38%), Positives = 385/661 (58%), Gaps = 39/661 (5%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
S ++ V+S+++ K + LF++ D++ V SWNS+I+ G S AL F
Sbjct: 586 SYNTVVNSLIATYFKSGEVDSAHKLFDELGDRD-VVSWNSMISGCVMNGFSHSALEFFVQ 644
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M L + +T ++ +C+ + L G+ H Q F R+V ++ L+DMYSKCG
Sbjct: 645 MLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGN 704
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L+DA + F+++ Q+ +VSWTS++ YV+ +A+ LF E S
Sbjct: 705 LNDAIQAFEKMGQK--TVVSWTSLIAAYVREGLYDDAIRLFYEM------------ESKG 750
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
V D ++ SVL AC+ N + +G H ++ K + V N L+D YA+ G ++
Sbjct: 751 VSPDVYSMTSVLHACA--CGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEE 808
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ VF + KD V+WN++I Y++N L EAL +F +M K + + + +T++ +L A
Sbjct: 809 AYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES--RPDGITMACLLPACG 866
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
L L +G+ IH +++ + V ++IDMY KCG + AR F+ + EK++ +WT
Sbjct: 867 SLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTV 926
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MI+G GMH EA+ F KM AG++P+ ITF S+L ACSH+GL+ EGW + N+M E
Sbjct: 927 MISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISEC 986
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
N+EP +EHY CMVDLL R G L +AY+LIE M +K D +WG+LL CRIH +V+L E
Sbjct: 987 NMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKV 1046
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
A+ +FELEP+N GY+VLL+NIYA A +WE+V++ R + R L K+PG S +E++GK
Sbjct: 1047 AEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTT 1106
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
F+ D HPQ + I+ L L +K++ G+ M + + EKE+ L HSEKLA
Sbjct: 1107 FVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMA 1166
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
NLRVC DCH + + +SK REI++RDS RFH+FKDG CSC D+
Sbjct: 1167 FGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRDF 1226
Query: 644 W 644
W
Sbjct: 1227 W 1227
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/450 (31%), Positives = 231/450 (51%), Gaps = 28/450 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ + N VF WN ++++ A+ GD E++ F M+KL +T TF C +K + L
Sbjct: 508 IFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLG 567
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ K+ H + GF V ++LI Y K GE+ A KLFDE+ R++VSW SM
Sbjct: 568 RVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGD--RDVVSWNSM 625
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G V N + AL F + L+ V VD + + ++AC+ V +
Sbjct: 626 ISGCVMNGFSHSALEFFVQMLILR------------VGVDLATLVNSVAACANVGSLSLG 673
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
HG +K F EV NTL+D Y++ G+++ + + F+ M +K V+W S+IA Y +
Sbjct: 674 RALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVRE 733
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL +A+ +F +M +S V + ++++VL A A L G+ +H+ + K ++ + V
Sbjct: 734 GLYDDAIRLFYEM-ESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPV 792
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+++DMY KCG ++ A F+Q+ K++ SW MI GY + EAL LF +M K
Sbjct: 793 SNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES- 851
Query: 388 RPNYITFVSVLSAC-SHAGL-VQEGWHWL---NTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
RP+ IT +L AC S A L + G H N E ++ ++D+ + G
Sbjct: 852 RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANA------LIDMYVKCGS 905
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
L A L + M + D + W ++ C +H
Sbjct: 906 LVHARLLFD-MIPEKDLITWTVMISGCGMH 934
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 209/431 (48%), Gaps = 26/431 (6%)
Query: 42 NSVIADLARGGD---SVEALRAFSSMRKLSLTPTRSTFP-CAIKSCSALHDLHSGKQAHQ 97
N+ I GD +VE LR S +L L S CA C L GK H
Sbjct: 422 NTKICKFCEVGDLRNAVELLR-MSQKSELDLNAYSSILQLCAEHKC-----LQEGKMVHS 475
Query: 98 QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA 157
G + + + L+ MY CG L + R++FD I + W M++ Y + +
Sbjct: 476 VISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSD-NKVFLWNLMMSEYAKIGDY 534
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
RE++ LFK+ + +S + +L + + G + HG V K
Sbjct: 535 RESIYLFKKM------------QKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKL 582
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
GF S V N+LI Y + G VD + K+FD + ++D V+WNS+I+ NG + AL+ F
Sbjct: 583 GFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFF 642
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
QM+ V + TL + A A++G L LG+ +H Q +K V+ +++DMY K
Sbjct: 643 VQML-ILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSK 701
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
CG ++ A +AF +M +K V SWT++IA Y +A+ LFY+M GV P+ + SV
Sbjct: 702 CGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSV 761
Query: 398 LSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
L AC+ + +G N + + N+ + ++D+ + G ++EAY + + VK
Sbjct: 762 LHACACGNSLDKGRDVHNYI-RKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVK- 819
Query: 458 DFVVWGSLLGA 468
D V W +++G
Sbjct: 820 DIVSWNTMIGG 830
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/626 (40%), Positives = 373/626 (59%), Gaps = 32/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V +WN++IA + G +A++ M++ + P ST + + L GK H
Sbjct: 174 DVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALH 233
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
F V V + L+DMY+KC L ARK+FD + +RN VSW++M+ GYV +D
Sbjct: 234 GYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG--VRNEVSWSAMIGGYVASDC 291
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+EAL LF + +L+ D + V + SVL AC+++T H ++IK
Sbjct: 292 MKEALELFDQMILK-----------DAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK 340
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G ++ +GNTL+ YA+ G +D + + FD M KD+V++++I++ QNG AA AL +
Sbjct: 341 LGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSI 400
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F +M++ + + + T+ VL A +HL L+ G C H +I ++ ++IDMY
Sbjct: 401 F-RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 459
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG++ AR+ FN+M ++ SW AMI GYG+H EAL LF+ ++ G++P+ ITF+
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+LS+CSH+GLV EG W + M +F+I P +EH CMVD+LGRAG + EA+ I M +
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 579
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
D +W +LL ACRIHKN++LGE +KK+ L P + G VLLSNIY+ AGRW+D R
Sbjct: 580 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIR 639
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
K+ L K PG S +E+ G VHAF+ GD+ H Q +I LEEL V+++ +GY + +
Sbjct: 640 ITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECS 699
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V DV++EEKE L HSEKLA NLRVCGDCHT I+ ++ +
Sbjct: 700 FVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLIT 759
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
REI VRD+ RFH+FK+G C+CGD+W
Sbjct: 760 KREITVRDANRFHHFKNGTCNCGDFW 785
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/514 (29%), Positives = 261/514 (50%), Gaps = 43/514 (8%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDK---NNVFSWNSVIADLARGGDSVEALRA 60
+ S++ SSV+ + + + N L + D+ +V WN +I A G A+
Sbjct: 37 NTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDL 96
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
+ SM L + P + T+P +K+CS L + G + H A +FG DVFV +AL+D Y+K
Sbjct: 97 YHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAK 156
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTG---YVQNDNAREALLLFKEFLLEESECGGA 177
CG L +A++LF + R++V+W +M+ G Y D+A + ++ +E
Sbjct: 157 CGILVEAQRLFSSMSH--RDVVAWNAMIAGCSLYGLCDDAVQLIMQMQE----------- 203
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
+ + +S I VL G + HG+ ++R FD+ V VG L+D YA+
Sbjct: 204 ----EGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQ 259
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
+ +RK+FD M ++ V+W+++I Y + EAL++FDQM+ + VTL +VL
Sbjct: 260 CLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVL 319
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A A L L G+ +H +IK+ +++G +++ MY KCG +D A + F++M K+
Sbjct: 320 RACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSV 379
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
S++A+++G + A AL +F M +G+ P+ T + VL ACSH +Q G+
Sbjct: 380 SFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF-----C 434
Query: 418 GHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
H + I G ++D+ + GK+ A ++ M + D V W +++ IH
Sbjct: 435 SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIH- 492
Query: 474 NVDLGEIAAKKLFE------LEPNNCGYHVLLSN 501
LG + A LF L+P++ + LLS+
Sbjct: 493 --GLG-MEALGLFHDLLALGLKPDDITFICLLSS 523
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 196/420 (46%), Gaps = 30/420 (7%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+++C L K+ HQ + D V L +Y C ++ AR+LFDEIP
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN--P 72
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+++ W ++ Y N A+ L+ L V + VL ACS
Sbjct: 73 SVILWNQIIRAYAWNGPFDGAIDLYHSML------------HLGVRPNKYTYPFVLKACS 120
Query: 200 RVTV--NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
+ +GV +H + G +S+V V L+D YA+ G + ++++F M +D V W
Sbjct: 121 GLLAIEDGVEIHSHAKMF--GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAW 178
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N++IA + GL +A+ + QM + + N+ T+ VL + L GK +H +
Sbjct: 179 NAMIAGCSLYGLCDDAVQLIMQM-QEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCV 237
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ + V+VGT ++DMY KC + ARK F+ M +N SW+AMI GY +EAL+
Sbjct: 238 RRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALE 297
Query: 378 LFYKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWH---WLNTMGHEFNIEPGVEHYGCM 433
LF +MI K + P +T SVL AC+ + G ++ +G +I G +
Sbjct: 298 LFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLG----NTL 353
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN--VDLGEIAAKKLFELEPN 491
+ + + G + +A + M K D V + +++ C + N V L +L ++P+
Sbjct: 354 LSMYAKCGVIDDAIRFFDEMNPK-DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPD 412
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 3/275 (1%)
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+L AC + + H +K +++ V + L Y V ++R++FD +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
+ WN II YA NG A+D++ M+ V+ N T VL A + L + G IH
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLH-LGVRPNKYTYPFVLKACSGLLAIEDGVEIH 132
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
LE V V T+++D Y KCG + A++ F+ M ++V +W AMIAG ++
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCD 192
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
+A+ L +M + G+ PN T V VL A + G L+ + + GV +
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHG-KALHGYCVRRSFDNGVVVGTGL 251
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+D+ + L A + + M V+ + V W +++G
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNE-VSWSAMIGG 285
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 13/129 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ +D++++ SWN++I G +EAL F + L L P TF C + SCS
Sbjct: 470 VFNR-MDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCS--- 525
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSS------ALIDMYSKCGELSDARKLFDEIPQRIRNI 141
HSG + + RD + ++D+ + G + +A +P ++
Sbjct: 526 --HSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE-PDV 582
Query: 142 VSWTSMLTG 150
W+++L+
Sbjct: 583 RIWSALLSA 591
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/631 (39%), Positives = 375/631 (59%), Gaps = 35/631 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++ ++ +WNS++ + G EAL F ++ L P + + I + L L +G
Sbjct: 221 LEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNG 280
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H A GF ++ V + LIDMY+KC +S + FD + + +++SWT+ GY
Sbjct: 281 KEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHK--DLISWTTAAAGYA 338
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN +AL L ++ +E + VD+ I S+L AC + G + HG
Sbjct: 339 QNKCYLQALELLRQLQMEGMD------------VDATMIGSILLACRGLNCLGKIKEIHG 386
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ I+ G V + NT+ID Y G +D + ++F+ + KD V+W S+I+ Y NGLA +
Sbjct: 387 YTIRGGLSDPV-LQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANK 445
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL+VF M K T ++ + VTL ++L A+ L L+ GK IH +I+ + +++
Sbjct: 446 ALEVFSSM-KETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLV 504
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY +CG V+ A K F K +N+ WTAMI+ YGMH A++LF +M + P++I
Sbjct: 505 DMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHI 564
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+++L ACSH+GLV EG +L M E+ +EP EHY C+VDLLGR L+EAY +++
Sbjct: 565 TFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKS 624
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M+ + VW +LLGACRIH N ++GE+AA+KL EL+ +N G +VL+SN++A GRW+DV
Sbjct: 625 MQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDV 684
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ-EVGY 571
E R MK L K PG S +E+ K+HAFL DK HP+ +KIY+ L ++ KL+ E GY
Sbjct: 685 EEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGY 744
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
V V+H+V +EEK L HSE+LA NLRVCGDCH+ L
Sbjct: 745 VAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTL 804
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+S+ +RE++VRD+ RFH+FKDG+CSCGD+W
Sbjct: 805 VSRFFERELIVRDASRFHHFKDGMCSCGDFW 835
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 259/485 (53%), Gaps = 36/485 (7%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
V+S+V+ K + LF++ +N+V SWNS+I+ + G EAL FS M K
Sbjct: 96 VNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAG 155
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
+ TF A+++C + G Q H G DV+V++AL+ MY + G++ +A
Sbjct: 156 VVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAA 215
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
+F + ++IV+W SMLTG++QN EAL F + +N+D + D
Sbjct: 216 VIFGNLEG--KDIVTWNSMLTGFIQNGLYSEALEFFYDL-----------QNAD-LKPDQ 261
Query: 189 VAIASVLSACSRV--TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
V+I S++ A R+ +NG + H + IK GFDS + VGNTLID YA+ + + F
Sbjct: 262 VSIISIIVASGRLGYLLNG--KEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAF 319
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM-VKSTDVKCNAVTLSAVLLAIAHLGV 305
D M KD ++W + A YAQN +AL++ Q+ ++ DV +A + ++LLA L
Sbjct: 320 DLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV--DATMIGSILLACRGLNC 377
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L K IH I+ L + V+ T IID+Y +CG +D A + F ++ K+V SWT+MI+
Sbjct: 378 LGKIKEIHGYTIRGGLSDPVLQNT-IIDVYGECGIIDYAVRIFESIECKDVVSWTSMISC 436
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y + A +AL++F M + G+ P+Y+T VS+LSA +++G H F I
Sbjct: 437 YVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEI-----HGFIIRK 491
Query: 426 GVEHYG----CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
G G +VD+ R G +++AY + K + + ++W +++ A +H GE A
Sbjct: 492 GFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNR-NLILWTAMISAYGMH---GYGE-A 546
Query: 482 AKKLF 486
A +LF
Sbjct: 547 AVELF 551
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 243/475 (51%), Gaps = 38/475 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K + + ++F+WN+++ G+++ AL + MR L ++ TFP +K+C +
Sbjct: 14 IFDK-MSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVE 72
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL G + H A +G VFV ++L+ +Y+KC +++ ARKLFD + R ++VSW S+
Sbjct: 73 DLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVR-NDVVSWNSI 131
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ Y N EAL LF E L V ++ A+ L AC + +
Sbjct: 132 ISAYSGNGMCTEALCLFSEML------------KAGVVTNTYTFAAALQACEDSSFIKLG 179
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H ++K G +V V N L+ Y R G + + +F + KD VTWNS++ + QN
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL +EAL+ F + ++ D+K + V++ ++++A LG L GK IH IK + +++V
Sbjct: 240 GLYSEALEFFYDL-QNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILV 298
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G ++IDMY KC + +AF+ M K++ SWT AGY + +AL+L ++ G+
Sbjct: 299 GNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGM 358
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMG-----HEFNIEPGVEH---YGCMVDLLGR 439
+ S+L AC LN +G H + I G+ ++D+ G
Sbjct: 359 DVDATMIGSILLACRG----------LNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGE 408
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK---NVDLGEIAAKKLFELEPN 491
G + A + E ++ K D V W S++ +C +H N L ++ K LEP+
Sbjct: 409 CGIIDYAVRIFESIECK-DVVSWTSMI-SCYVHNGLANKALEVFSSMKETGLEPD 461
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 186/390 (47%), Gaps = 53/390 (13%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY KCG + DA +FD++ + R+I +W +M+ GYV N A AL +++E
Sbjct: 1 MYGKCGSVLDAEMIFDKMSE--RSIFTWNAMMGGYVSNGEALGALEMYREM--------- 49
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
V DS +L AC V HG IK G DS V V N+L+ YA+
Sbjct: 50 ---RHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKC 106
Query: 237 GHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
++ +RK+FD M + D V+WNSII+ Y+ NG+ EAL +F +M+K+ V N T +A
Sbjct: 107 NDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKA-GVVTNTYTFAA 165
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
L A ++LG IH ++K V V +++ MY + G++ A F ++ K+
Sbjct: 166 ALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKD 225
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH--- 412
+ +W +M+ G+ + EAL+ FY + A ++P+ ++ +S++ A G + G
Sbjct: 226 IVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHA 285
Query: 413 WLNTMGHEFNIEPG---VEHYG--CMVDLLGRAGKLKEAYDLI----------------- 450
+ G + NI G ++ Y C + GRA L DLI
Sbjct: 286 YAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQ 345
Query: 451 ----------EGMKVKADFVVWGSLLGACR 470
EGM V A + GS+L ACR
Sbjct: 346 ALELLRQLQMEGMDVDATMI--GSILLACR 373
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/626 (39%), Positives = 356/626 (56%), Gaps = 33/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SWNS+IA A+ G A + F M+ L P TF + C L GKQ H
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIH 555
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+ G DV + +ALI+MY +CG L DAR +F + R +++SWT+M+ G
Sbjct: 556 GRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR--DVMSWTAMIGGCADQGE 613
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+A+ LF + +N V S +S+L C+ + +++
Sbjct: 614 DMKAIELFWQM-----------QNEGFRPVKST-FSSILKVCTSSACLDEGKKVIAYILN 661
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G++ + GVGN LI AY++ G + +R+VFD M +D V+WN IIA YAQNGL A++
Sbjct: 662 SGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEF 721
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
QM + DV N + ++L A + L GK +H +++K L+ V VG ++I MY
Sbjct: 722 AYQM-QEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYA 780
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG A++ F+ + EKNV +W AMI Y H A +AL F M K G++P+ TF S
Sbjct: 781 KCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTS 840
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+LSAC+HAGLV EG+ ++M E+ + P +EHYGC+V LLGRA + +EA LI M
Sbjct: 841 ILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFP 900
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
D VW +LLGACRIH N+ L E AA +L N ++LLSN+YA AGRW+DV + R
Sbjct: 901 PDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIR 960
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
+M+ R + K PG S +E+ +H F+ D+ HP+ +IY L+ L+V+++E GY D
Sbjct: 961 RVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQ 1020
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V+HD+ + +E +L HSE+LA NLR+CGDCHT + ISK+V
Sbjct: 1021 HVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLV 1080
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
REI+ RDS RFH FK+G CSC DYW
Sbjct: 1081 GREIIARDSNRFHSFKNGKCSCEDYW 1106
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/480 (30%), Positives = 248/480 (51%), Gaps = 35/480 (7%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + + +V SWNS+I+ A+ G +A + F M+ P + T+ + +C + +L
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+GK+ H Q G+ RD V ++L+ MY KCG+L AR++F I R ++VS+ +ML
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPR--DVVSYNTMLGL 203
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y Q +E L LF + +S+ + D V ++L A + ++ +
Sbjct: 204 YAQKAYVKECLGLFGQM------------SSEGISPDKVTYINLLDAFTTPSMLDEGKRI 251
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H ++ G +S++ VG L+ R G VD +++ F G ++D V +N++IA AQ+G
Sbjct: 252 HKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHN 311
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA + + +M +S V N T ++L A + L GK IH + + V +G +
Sbjct: 312 VEAFEQYYRM-RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNA 370
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+I MY +CG + AR+ F M ++++ SW A+IAGY EA+ L+ +M GV+P
Sbjct: 371 LISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPG 430
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG----CMVDLLGRAGKLKEA 446
+TF+ +LSAC+++ +G M HE + G++ G ++++ R G L EA
Sbjct: 431 RVTFLHLLSACANSSAYADG-----KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEA 485
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF------ELEPNNCGYHVLLS 500
++ EG + + D + W S++ H + + A KLF ELEP+N + +LS
Sbjct: 486 QNVFEGTQAR-DVISWNSMIAGHAQHGSYE----TAYKLFQEMQNEELEPDNITFASVLS 540
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 141/554 (25%), Positives = 258/554 (46%), Gaps = 57/554 (10%)
Query: 73 RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFD 132
R+T+ +++C+ L K+ H Q D+F+S+ LI+MY KC + DA ++F
Sbjct: 27 RATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFK 86
Query: 133 EIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIA 192
E+P+ R+++SW S+++ Y Q ++A LF+E + + +
Sbjct: 87 EMPR--RDVISWNSLISCYAQQGFKKKAFQLFEEM------------QNAGFIPNKITYI 132
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK 252
S+L+AC + H +IK G+ + V N+L+ Y + G + +R+VF G+ +
Sbjct: 133 SILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPR 192
Query: 253 DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI 312
D V++N+++ +YAQ E L +F QM S + + VT +L A +L GK I
Sbjct: 193 DVVSYNTMLGLYAQKAYVKECLGLFGQM-SSEGISPDKVTYINLLDAFTTPSMLDEGKRI 251
Query: 313 HDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
H ++ L + VGT+++ M +CG VD A++AF +++V + A+IA H
Sbjct: 252 HKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHN 311
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG---WHWLNTMGHEFNIEPGVEH 429
EA + +Y+M GV N T++S+L+ACS + ++ G ++ GH +++ G
Sbjct: 312 VEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG--- 368
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG----------ACRIHKN----- 474
++ + R G L +A +L M K D + W +++ A R++K
Sbjct: 369 -NALISMYARCGDLPKARELFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEG 426
Query: 475 VDLGEIAAKKLFELEPNNCGY--------HVLLSNIYANA----GRWEDVERTRSLMKNR 522
V G + L N+ Y +L S I +N R SLM+ +
Sbjct: 427 VKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQ 486
Query: 523 RLAKTPGFSLVELRGKV--HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIH 580
+ F + R + ++ + G +H +E Y+ +E+ + E +T + +
Sbjct: 487 NV-----FEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSG 541
Query: 581 DVDQEEKEMTLRIH 594
+ E E+ +IH
Sbjct: 542 CKNPEALELGKQIH 555
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 229/455 (50%), Gaps = 23/455 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ +V S+N+++ A+ E L F M ++P + T+ + + + L G
Sbjct: 189 ISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEG 248
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H+ G + D+ V +AL+ M +CG++ A++ F R ++V + +++
Sbjct: 249 KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADR--DVVVYNALIAALA 306
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+ + EA F+++ SD V ++ S+L+ACS + H
Sbjct: 307 QHGHNVEA---FEQYY---------RMRSDGVALNRTTYLSILNACSTSKALEAGKLIHS 354
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ + G S+V +GN LI YAR G + +R++F M ++D ++WN+IIA YA+ E
Sbjct: 355 HISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGE 414
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+ ++ QM +S VK VT +L A A+ GK IH+ +++ ++ + + +++
Sbjct: 415 AMRLYKQM-QSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+MY +CG + A+ F + ++V SW +MIAG+ H A LF +M + P+ I
Sbjct: 474 NMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNI 533
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF SVLS C + ++ G ++ E ++ V ++++ R G L++A ++
Sbjct: 534 TFASVLSGCKNPEALELGKQ-IHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHS 592
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGE-IAAKKLF 486
++ + D + W +++G C D GE + A +LF
Sbjct: 593 LQHR-DVMSWTAMIGGC-----ADQGEDMKAIELF 621
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 146/312 (46%), Gaps = 17/312 (5%)
Query: 171 ESECGGASENSDNVF------VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
E CG E+ N + ++L C+R + + H +++ ++
Sbjct: 4 ERHCGPDREDVSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIF 63
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+ N LI+ Y + V + +VF M +D ++WNS+I+ YAQ G +A +F++M +
Sbjct: 64 LSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAG 123
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+ N +T ++L A L GK IH Q+IK + V S++ MY KCG + A
Sbjct: 124 FIP-NKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRA 182
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R+ F + ++V S+ M+ Y +E L LF +M G+ P+ +T++++L A +
Sbjct: 183 RQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTP 242
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
++ EG H+ +E G+ +V + R G + A +G + D V
Sbjct: 243 SMLDEGKRI-----HKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADR-DVV 296
Query: 461 VWGSLLGACRIH 472
V+ +L+ A H
Sbjct: 297 VYNALIAALAQH 308
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
++++S K + +F+ ++KN V +WN++I A+ G + +AL F+ M K +
Sbjct: 773 AALISMYAKCGSQGEAQEVFDNIIEKN-VVTWNAMINAYAQHGLASKALGFFNCMEKEGI 831
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQ-AFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
P STF + +C+ + G Q +G + L+ + + +A
Sbjct: 832 KPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAE 891
Query: 129 KLFDEIP 135
L +++P
Sbjct: 892 TLINQMP 898
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/642 (39%), Positives = 380/642 (59%), Gaps = 44/642 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL--SLTPTRSTFPCAIKSCSALHDLH 90
+ ++ +WN+++A A G A+ SM+ L P ST + + L
Sbjct: 186 MPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALA 245
Query: 91 SGKQAHQQAFIFGFHRD----------VFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
G H H + V + +AL+DMY+KCG L AR++FD +P R N
Sbjct: 246 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR--N 303
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
V+W++++ G+V +A LLFK +L + C F+ +IAS L AC+
Sbjct: 304 EVTWSALIGGFVLCSRMTQAFLLFKA-MLAQGLC----------FLSPTSIASALRACAS 352
Query: 201 VTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSI 260
+ + E H + K G +++ GN+L+ YA+ G +D + +FD M KD V+++++
Sbjct: 353 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 412
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
++ Y QNG A EA VF +M ++ +V+ +A T+ +++ A +HL L+ G+C H VI
Sbjct: 413 VSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 471
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
L + ++IDMY KCG++DL+R+ FN M +++ SW MIAGYG+H +EA LF
Sbjct: 472 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 531
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+M G P+ +TF+ +LSACSH+GLV EG HW + MGH + + P +EHY CMVDLL R
Sbjct: 532 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 591
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
G L EAY+ I+ M ++AD VW +LLGACR++KN+DLG+ ++ + EL P G VLLS
Sbjct: 592 GFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLS 651
Query: 501 NIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLE 560
NIY+ AGR+++ R + K + K+PG S +E+ G +HAF+ GD+ HPQ +IY L+
Sbjct: 652 NIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELD 711
Query: 561 ELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLR 602
+ V ++++GY D + V+ D+++EEKE L HSEKLA NLR
Sbjct: 712 NILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLR 771
Query: 603 VCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
VCGDCHTVI+ IS V R I+VRD+ RFH+FK+G CSCGD+W
Sbjct: 772 VCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 236/486 (48%), Gaps = 44/486 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEA--LRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
LF++ + +V ++N +I + + A L + M + + P TFP A+K+CSA
Sbjct: 79 LFDQ-IPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSA 137
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L D H G+ H+ A G D+FVS+AL+DMY KC L DA +F +P R++V+W
Sbjct: 138 LADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA--RDLVAWN 195
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+ML GY + A+ L + + N+ + VA+ +L+
Sbjct: 196 AMLAGYAHHGMYHHAV---AHLLSMQMQMHRLRPNASTL----VALLPLLA-----QQGA 243
Query: 206 VTEGA--HGFVI----------KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+ +G H + I K V +G L+D YA+ G + +R+VFD M ++
Sbjct: 244 LAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 303
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
VTW+++I + +A +F M+ + ++++ L A A L LR+G+ +H
Sbjct: 304 EVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLH 363
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+ K + + G S++ MY K G +D A F++M K+ S++A+++GY + RA
Sbjct: 364 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV--EHYG 431
EA +F KM V P+ T VS++ ACSH +Q G H I G+ E
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG-----RCSHGSVIIRGLASETSI 478
Query: 432 C--MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
C ++D+ + G++ + + M + D V W +++ IH LG+ A LF LE
Sbjct: 479 CNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIH---GLGK-EATALF-LE 532
Query: 490 PNNCGY 495
NN G+
Sbjct: 533 MNNLGF 538
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 167/372 (44%), Gaps = 56/372 (15%)
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN--AREALLLFKEFLLEESECGGASE 179
G LS A LFD+IP ++ ++ ++ Y + A + L L++ L
Sbjct: 71 GHLSRAHHLFDQIPSP--DVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHR-------- 120
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
V ++ L ACS + + H I G +++ V L+D Y + +
Sbjct: 121 ----VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACL 176
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL-DVFDQMVKSTDVKCNAVTLSAVLL 298
+ +F M +D V WN+++A YA +G+ A+ + ++ ++ NA TL A+L
Sbjct: 177 PDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLP 236
Query: 299 AIAHLGVLRLGKCIHDQVI----------KMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+A G L G +H I K L + V++GT+++DMY KCG + AR+ F
Sbjct: 237 LLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVF 296
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG---VRPNYITFVSVLSACS--- 402
+ M +N +W+A+I G+ + R +A LF M+ G + P I S L AC+
Sbjct: 297 DAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLD 354
Query: 403 --------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
HA L + G H T G+ ++ + +AG + +A L + M
Sbjct: 355 HLRMGEQLHALLAKSGVHADLTAGNS------------LLSMYAKAGLIDQAIALFDEMA 402
Query: 455 VKADFVVWGSLL 466
VK D V + +L+
Sbjct: 403 VK-DTVSYSALV 413
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG--LAAEALDVFDQMVKSTDVKCNAVTLS 294
GH+ + +FD + D T+N +I Y+ + AA+ L ++ +M++ V N T
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHR-VAPNNYTFP 129
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
L A + L G+ IH I L+ + V T+++DMY KC + A F M +
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 355 NVRSWTAMIAGYGMHCRAREALD--LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
++ +W AM+AGY H A+ L +M +RPN T V++L + G + +G
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG-- 247
Query: 413 WLNTMGHEFNIEP--------------GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
T H + I GV ++D+ + G L A + + M + +
Sbjct: 248 ---TSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNE 304
Query: 459 FVVWGSLLG 467
V W +L+G
Sbjct: 305 -VTWSALIG 312
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L+ +S+ + + ++ +L+ + ++ SWN++IA G EA F
Sbjct: 472 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 531
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ-AHQQAFIFGFHRDVFVSSALIDMYSKC 121
M L P TF C + +CS + GK H +G + ++D+ S+
Sbjct: 532 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 591
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSML 148
G L +A + +P R ++ W ++L
Sbjct: 592 GFLDEAYEFIQSMPLRA-DVRVWVALL 617
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 258/649 (39%), Positives = 372/649 (57%), Gaps = 67/649 (10%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRK----LSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
SW I A GD A+ F MR + + ++ P A+KSC+AL G
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGE--------------LSDARKLFDEIPQRIRNI 141
H A G D F ++AL+++Y K L RK+FDE+P++ ++
Sbjct: 81 HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEK--DV 138
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
VSW +++ G ++ EAL L +E D DS ++SVL
Sbjct: 139 VSWNTLVLGCAESGRHGEALGLVREMW------------RDGCKPDSFTLSSVLPI---- 182
Query: 202 TVNGVTEGA--------HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
EGA HGF + GF +V VG++LID YA D S KVFD + +D
Sbjct: 183 ----FAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD 238
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
A+ WNS++A AQNG EAL +F +M+ S +K VT S+++ A +L L LGK +H
Sbjct: 239 AILWNSMLAGCAQNGSVDEALGLFRRMLHS-GIKPMPVTFSSLIPACGNLASLLLGKQLH 297
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
VI+ + +V + +S+IDMYCKCG V +AR+ F++++ ++ SWTAMI G+ +H AR
Sbjct: 298 AYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAR 357
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
EAL LF +M ++PN+ITF++VL+ACSHAGLV +GW + N+M + I P +EH+ +
Sbjct: 358 EALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAAL 417
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
D LGR GKL+EAY+ I GMK+K VW +LL AC++HKN L E AKK+F+LEP +
Sbjct: 418 ADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSM 477
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
G H++LSN Y+++GRW + R M+ + + K P S +E++ K H F+ DK HP +E
Sbjct: 478 GSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYE 537
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------- 599
+I + L + ++ GYV + V D+++E+K L HSEKLA
Sbjct: 538 RIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTI 597
Query: 600 ----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHTV + ISK+V REIV+RD+ RFH+FKDG+CSCGD+W
Sbjct: 598 RVMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 174/344 (50%), Gaps = 18/344 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +K+ V SWN+++ A G EAL M + P T + +
Sbjct: 129 VFDEMPEKD-VVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGA 187
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D+ G + H A GFH DVFV S+LIDMY+ C + K+FD +P +R+ + W SM
Sbjct: 188 DVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLP--VRDAILWNSM 245
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
L G QN + EAL LF+ L + V +S++ AC + +
Sbjct: 246 LAGCAQNGSVDEALGLFRRML------------HSGIKPMPVTFSSLIPACGNLASLLLG 293
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H +VI+ GFD V + ++LID Y + G+V ++R++FD + D V+W ++I +A +
Sbjct: 294 KQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALH 353
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVI 326
G A EAL +FD+M + ++K N +T AVL A +H G++ G K + + S+
Sbjct: 354 GPAREALVLFDRM-ELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLE 412
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
++ D + G+++ A + MK K S W+ ++ +H
Sbjct: 413 HHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVH 456
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/638 (39%), Positives = 378/638 (59%), Gaps = 39/638 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ V KN+ F WN +I A G +++L + M T+P +K+C L
Sbjct: 117 IFDGIVLKNS-FLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLL 175
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G++ H + + G D++V ++L+ MY+K G++ AR +FD + +R ++ SW +M
Sbjct: 176 LVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAER--DLTSWNTM 233
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY +N ++ A L+F L+ ++ +F D + +LSAC+ + V
Sbjct: 234 ISGYAKNADSGTAFLVFD--LMGKA----------GLFADCTTLLGLLSACA--DLKAVK 279
Query: 208 EGA--HGFVIKRGF-DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
EG HG+ ++ + N+LI+ Y + +R++F+ + KD V+WNS+I Y
Sbjct: 280 EGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGY 339
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
A+NG A E+L +F +M + VT AVL A + LR G IH ++K + +
Sbjct: 340 ARNGDAFESLRLFRRMALDGSGP-DQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDAN 398
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
IVGT+++DMY KCG + +R+ F++M +K++ SW+AM+AGYG+H R REA+ + M
Sbjct: 399 TIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKA 458
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
V P+ F S+LSACSHAGLV EG M E+N++P + HY CMVDLLGRAG L
Sbjct: 459 NSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLD 518
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
EAY +I M++K +W +LL A R+HKN+ L EI+A+K+F++ P ++ LSNIYA
Sbjct: 519 EAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYA 578
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
RW+DVER R++++ + L K+PG S +EL VH FLVGDK H Q E IY L EL
Sbjct: 579 AEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQ 638
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
+L+E GY D + V +DV++E KE L HSE+LA NLRVCGD
Sbjct: 639 QLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGD 698
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CHTV +LIS++ REI++RD RFH+F G CSCGDYW
Sbjct: 699 CHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 132/251 (52%), Gaps = 23/251 (9%)
Query: 227 NTLIDA-YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD 285
NT + A YA G + + +FDG++ K++ WN +I YA NGL ++L ++ +M+
Sbjct: 98 NTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREML-CFG 156
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
+ + T VL A L ++ +G+ +H +V+ LE + VG S++ MY K G + AR
Sbjct: 157 QRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTAR 216
Query: 346 KAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
F++M E+++ SW MI+GY + + A +F M KAG+ + T + +LSAC+
Sbjct: 217 MVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLK 276
Query: 406 LVQE-----GWHWLNTMG--HEFNIEPGVEHY---GCMVDLLGRAGKLKEAYDLIEGMKV 455
V+E G+ N++G ++F +E Y CMVD A L E ++
Sbjct: 277 AVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVD----------ARRLFERVRW 326
Query: 456 KADFVVWGSLL 466
K D V W S++
Sbjct: 327 K-DTVSWNSMI 336
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCK 337
Q T ++C A+ L + + + G+ +H +I LE + + T + Y
Sbjct: 53 QQYPLTSLQCGAL-----LQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAG 107
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
CG + A F+ + KN W MI GY + ++L L+ +M+ G R + T+ V
Sbjct: 108 CGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFV 167
Query: 398 LSACSHAGLVQEG 410
L AC LV+ G
Sbjct: 168 LKACGDLLLVEIG 180
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/632 (40%), Positives = 363/632 (57%), Gaps = 39/632 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHS 91
V + WN+++A L EAL AF M + P +T ++++ + +
Sbjct: 175 VPSPDTILWNTLLAGLP----GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAM 230
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ H G V + L+ +YSKCG++ A+ LFD + ++V++ ++++GY
Sbjct: 231 GRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNP--DLVAYNALISGY 288
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
N ++ LFKE G NS + VA+ V S + H
Sbjct: 289 SVNGMVESSVELFKEL-----TASGWRPNSSTL----VAVIPVYSPFGH---ELLARCLH 336
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
FV+K D++ V L Y R ++ +R +FD M+EK +WN++I+ YAQNGL
Sbjct: 337 AFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTE 396
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
A+ +F Q+++ +V+ N +T+S+ L A AHLG L LGK +H + K LE +V V T++
Sbjct: 397 MAVALF-QLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTAL 455
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
IDMY KCG + AR F++M KNV SW AMI+GYG+H + EAL L+ M+ A + P
Sbjct: 456 IDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTS 515
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
TF+SV+ ACSH GLV EG M +E+ I PG+EH CMVDLLGRAGKL EA +LI
Sbjct: 516 STFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELIS 575
Query: 452 GMKVKA-DFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
A VWG+LLGAC +HKN DL ++A++KLFEL+ N GY+VLLSN+Y + +
Sbjct: 576 EFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYS 635
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
+ R K R+L KTPG +L+E+ + H F+ GD HPQ E IY YLE L K+ E G
Sbjct: 636 EAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAG 695
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
Y + ++DV++EEKE +++HSEKLA NLRVC DCH +
Sbjct: 696 YQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATK 755
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
ISKV R IVVRD+ RFH+F+DG+CSCGDYW
Sbjct: 756 FISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 207/422 (49%), Gaps = 27/422 (6%)
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSAL-------HDLHSGKQAHQQAFIFGFHRDVFV 110
LR+ S+R L P+ +F A + S +D + + H + G+ D FV
Sbjct: 92 LRSLPSLRPHLLFPSPDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFV 151
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+SAL +Y K DARK+FD +P + + W ++L G EAL F +
Sbjct: 152 ASALAKLYFKLSRGDDARKVFDTVPS--PDTILWNTLLAGL----PGSEALEAFVRMV-- 203
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI 230
++ V DS +AS L A + + + HG+ +K G V L+
Sbjct: 204 ---------DAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLM 254
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
Y++ G +D ++ +FD M D V +N++I+ Y+ NG+ ++++F ++ S + N+
Sbjct: 255 SLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTAS-GWRPNS 313
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
TL AV+ + G L +C+H V+K L+ +V T++ +YC+ ++ AR F+
Sbjct: 314 STLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDA 373
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
M EK + SW AMI+GY + A+ LF M + V+PN IT S LSAC+H G + G
Sbjct: 374 MLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLG 433
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
W++ + + +E V ++D+ + G + EA + + M K + V W +++
Sbjct: 434 -KWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNK-NVVSWNAMISGYG 491
Query: 471 IH 472
+H
Sbjct: 492 LH 493
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/585 (40%), Positives = 362/585 (61%), Gaps = 35/585 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+ C + + G++ H + V++ + LI +Y+KC L DAR++ DE+P+R
Sbjct: 17 LTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER-- 74
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+VSWT+M++GY Q A EAL LF E L+ S + N F A+VL++C+
Sbjct: 75 NVVSWTAMISGYSQRGYASEALHLFVEMLM--------SGTAPNEFT----FATVLTSCT 122
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ + H VIK F+S + VG++L+D YA+ G + +R+VFDG+ E+D V+ +
Sbjct: 123 SSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTA 182
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
II+ YAQ GL EALD+F ++ + ++ N VT ++VL A++ L L G+ +H V++
Sbjct: 183 IISGYAQLGLDEEALDLFRRLQRE-GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRA 241
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
L V++ S+IDMY KCG + +R+ F+ M E+ V SW AM+ GY H REA++LF
Sbjct: 242 KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELF 301
Query: 380 YKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN-IEPGVEHYGCMVDLL 437
M + V+P+ +TF++VLS CSH G+ G M ++ + EP +EHYGC+VDL
Sbjct: 302 KLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLF 361
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GRAG+++EA++ I+ M + +WGSLLGACR+H+NV +GE A++L E+E N G +V
Sbjct: 362 GRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYV 421
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
+LSN+YA+AGRW+DV R LMK + + K PG S +EL +H F D+ HP+ E+++
Sbjct: 422 ILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFA 481
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
+ EL++K++E GYV +++ V++DVD E+KE L+ HSEKLA
Sbjct: 482 KVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIK 541
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH + +S+V RE+ +RD RFH+ G CSCGDYW
Sbjct: 542 NLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 182/362 (50%), Gaps = 29/362 (8%)
Query: 23 TNLTTLFNK------------YVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT 70
T L L+NK + + NV SW ++I+ ++ G + EAL F M
Sbjct: 49 TRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTA 108
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P TF + SC++ G+Q H F +FV S+L+DMY+K G++ +AR++
Sbjct: 109 PNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRV 168
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
FD +P+ R++VS T++++GY Q EAL LF+ E G N V
Sbjct: 169 FDGLPE--RDVVSCTAIISGYAQLGLDEEALDLFRRLQRE-----GMRSN-------YVT 214
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
ASVL+A S + H V++ V + N+LID Y++ G + SR++FD M
Sbjct: 215 YASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP 274
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
E+ ++WN+++ Y+++GL EA+++F M + VK ++VT AVL +H G+ G
Sbjct: 275 ERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGL 334
Query: 311 CIHDQVI--KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYG 367
I +++ K E + ++D++ + G+V+ A + +M E W +++
Sbjct: 335 EIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACR 394
Query: 368 MH 369
+H
Sbjct: 395 VH 396
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/634 (39%), Positives = 372/634 (58%), Gaps = 66/634 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ D+N VF +N +I + L F M P T+PC +K+CS
Sbjct: 75 VFDEMSDRNVVF-YNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSE 133
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L G H G ++FV + LI MY KCG L +AR++FDE+ + ++VSW SM
Sbjct: 134 NLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWK--DVVSWNSM 191
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY N +AL E E + G D +AS++ A
Sbjct: 192 VAGYAHNMRFDDAL----EICREMEDYGQKP--------DGCTMASLMPA---------- 229
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
V NT +V K+F + K+ ++WN +I +Y +N
Sbjct: 230 -----------------VANT------SSENVLYVEKIFVNLERKNLISWNVMIRVYMKN 266
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
L +A+D++ QM K V+ +A+T ++VL A L L LG+ IH+ V K L ++++
Sbjct: 267 SLPTQAVDLYLQMEKCR-VEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLL 325
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
S+IDMY +CG +D A++ F++MK ++V SWT++I+ YGM + A+ LF +M+ +G
Sbjct: 326 ENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQ 385
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ I FV++LSACSH+GL+ EG + M ++ I P +EHY C+VDLLGRAG++ EAY
Sbjct: 386 APDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAY 445
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
++I+ M ++ + VW +LL +CR+ N+D+G +AA L +L P GY+VLLSNIYA AG
Sbjct: 446 NIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAG 505
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RW++V RS+MK +++ KTPG S VEL +VH FL GD HPQ ++IYE L L K++
Sbjct: 506 RWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMK 565
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------NLRVCGDCHTV 610
E+GYV + S +HDV++E+KE L +HSEKLA NLRVCGDCH
Sbjct: 566 ELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQEYQIRITKNLRVCGDCHIA 625
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LISK+V+REI+VRD+ RFH+FKDG+CSCGDYW
Sbjct: 626 AKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 180/399 (45%), Gaps = 58/399 (14%)
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDE 133
++F K+ D+ + K+ H F H++ + L+ Y+ CGE RK+FDE
Sbjct: 19 TSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDE 78
Query: 134 IPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
+ RN+V + M+ YV N + LL+F+E + GG D+
Sbjct: 79 MSD--RNVVFYNVMIRSYVNNHRYDDGLLVFREMV-----NGGFRP-------DNYTYPC 124
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
VL ACS HG V+K G D + VGN LI Y + G + +R+VFD MI KD
Sbjct: 125 VLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKD 184
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V+WNS++A YA N +AL++ +M + K + T+++++ A+A+
Sbjct: 185 VVSWNSMVAGYAHNMRFDDALEICREM-EDYGQKPDGCTMASLMPAVANTS--------- 234
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
E+V+ K F ++ KN+ SW MI Y +
Sbjct: 235 --------SENVL----------------YVEKIFVNLERKNLISWNVMIRVYMKNSLPT 270
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF----NIEPGVEH 429
+A+DL+ +M K V P+ ITF SVL AC + G HE+ + P +
Sbjct: 271 QAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRI-----HEYVEKKKLCPNLLL 325
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
++D+ R G L +A + + MK + D W SL+ A
Sbjct: 326 ENSLIDMYARCGCLDDAKRVFDRMKFR-DVASWTSLISA 363
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 156/315 (49%), Gaps = 28/315 (8%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+G L+ +YA G ++RKVFD M +++ V +N +I Y N + L VF +MV
Sbjct: 55 LGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNG- 113
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+ + T VL A + LR G IH V+K+ L+ ++ VG +I MY KCG + A
Sbjct: 114 GFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEA 173
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R+ F++M K+V SW +M+AGY + R +AL++ +M G +P+ T S++ A ++
Sbjct: 174 RRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANT 233
Query: 405 GLVQEGWHWLNTMGHEFNIE-PGVEHYGCMVDLLGRAGKLKEAYDL---IEGMKVKADFV 460
E ++ + N+E + + M+ + + +A DL +E +V+ D +
Sbjct: 234 S--SENVLYVEKIF--VNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAI 289
Query: 461 VWGSLLGAC----------RIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
+ S+L AC RIH+ V+ ++ L E L ++YA G +
Sbjct: 290 TFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENS---------LIDMYARCGCLD 340
Query: 511 DVERTRSLMKNRRLA 525
D +R MK R +A
Sbjct: 341 DAKRVFDRMKFRDVA 355
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/626 (40%), Positives = 372/626 (59%), Gaps = 32/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V +WN++IA + G +A++ M++ + P ST + + L GK H
Sbjct: 174 DVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALH 233
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
F V V + L+DMY+KC L ARK+FD + +RN VSW++M+ GYV +D
Sbjct: 234 GYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG--VRNEVSWSAMIGGYVXSDC 291
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+EAL LF + +L+ D + V + SVL AC+++T H ++IK
Sbjct: 292 MKEALELFDQMILK-----------DAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK 340
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G ++ +GNTL+ YA+ G +D + + FD M KD+V++++I++ QNG AA AL +
Sbjct: 341 LGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSI 400
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F +M++ + + + T+ VL A +HL L+ G C H +I ++ ++IDMY
Sbjct: 401 F-RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 459
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG++ AR+ FN+M ++ SW AMI GYG+H EAL LF+ ++ G++P+ ITF+
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+LS+CSH+GLV EG W + M +F+I P +EH CMVD+LGRAG + EA+ I M +
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 579
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
D +W +LL ACRIHKN++LGE +KK+ L P + G VLLSNIY+ AGRW+D R
Sbjct: 580 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIR 639
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
K+ L K PG S +E+ G VHAF+ GD+ H Q +I LEEL V+++ +GY + +
Sbjct: 640 ITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECS 699
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V DV++EEKE L HSEKLA NLRVCGDCH I+ ++ +
Sbjct: 700 FVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVIT 759
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
REI VRD+ RFH+FK+G C+CGD+W
Sbjct: 760 KREITVRDANRFHHFKNGTCNCGDFW 785
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/514 (29%), Positives = 262/514 (50%), Gaps = 43/514 (8%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDK---NNVFSWNSVIADLARGGDSVEALRA 60
+ S++ SSV+ + + + N L + D+ +V WN +I A G A+
Sbjct: 37 NTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDL 96
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
+ SM L + P + T+P +K+CS L + G + H A +FG DVFV +AL+D Y+K
Sbjct: 97 YHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAK 156
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTG---YVQNDNAREALLLFKEFLLEESECGGA 177
CG L +A++LF + R++V+W +M+ G Y D+A + ++ +E
Sbjct: 157 CGILVEAQRLFSSMSH--RDVVAWNAMIAGCSLYGLCDDAVQLIMQMQE----------- 203
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
+ + +S I VL G + HG+ ++R FD+ V VG L+D YA+
Sbjct: 204 ----EGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQ 259
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
+ +RK+FD M ++ V+W+++I Y + EAL++FDQM+ + VTL +VL
Sbjct: 260 CLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVL 319
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A A L L G+ +H +IK+ +++G +++ MY KCG +D A + F+ M K+
Sbjct: 320 RACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSV 379
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
S++A+++G + A AL +F M +G+ P+ T + VL ACSH +Q G+
Sbjct: 380 SFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF-----C 434
Query: 418 GHEFNIEPG--VEHYGC--MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
H + I G + C ++D+ + GK+ A ++ M + D V W +++ IH
Sbjct: 435 SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIH- 492
Query: 474 NVDLGEIAAKKLFE------LEPNNCGYHVLLSN 501
LG + A LF L+P++ + LLS+
Sbjct: 493 --GLG-MEALGLFHDLLALGLKPDDITFICLLSS 523
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 196/420 (46%), Gaps = 30/420 (7%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+++C L K+ HQ + D V L +Y C ++ AR+LFDEIP
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN--P 72
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+++ W ++ Y N A+ L+ L V + VL ACS
Sbjct: 73 SVILWNQIIRAYAWNGPFDGAIDLYHSML------------HLGVRPNKYTYPFVLKACS 120
Query: 200 RVTV--NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
+ +GV +H + G +S+V V L+D YA+ G + ++++F M +D V W
Sbjct: 121 GLLAIEDGVEIHSHAKMF--GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAW 178
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N++IA + GL +A+ + QM + + N+ T+ VL + L GK +H +
Sbjct: 179 NAMIAGCSLYGLCDDAVQLIMQM-QEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCV 237
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ + V+VGT ++DMY KC + ARK F+ M +N SW+AMI GY +EAL+
Sbjct: 238 RRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALE 297
Query: 378 LFYKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWH---WLNTMGHEFNIEPGVEHYGCM 433
LF +MI K + P +T SVL AC+ + G ++ +G +I G +
Sbjct: 298 LFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLG----NTL 353
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN--VDLGEIAAKKLFELEPN 491
+ + + G + +A + M K D V + +++ C + N V L +L ++P+
Sbjct: 354 LSMYAKCGVIDDAIRFFDXMNPK-DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPD 412
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 3/275 (1%)
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+L AC + + H +K +++ V + L Y V ++R++FD +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
+ WN II YA NG A+D++ M+ V+ N T VL A + L + G IH
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLH-LGVRPNKYTYPFVLKACSGLLAIEDGVEIH 132
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
LE V V T+++D Y KCG + A++ F+ M ++V +W AMIAG ++
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCD 192
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
+A+ L +M + G+ PN T V VL A + G L+ + + GV +
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHG-KALHGYCVRRSFDNGVVVGTGL 251
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+D+ + L A + + M V+ + V W +++G
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNE-VSWSAMIGG 285
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 13/129 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ +D++++ SWN++I G +EAL F + L L P TF C + SCS
Sbjct: 470 VFNR-MDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCS--- 525
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSS------ALIDMYSKCGELSDARKLFDEIPQRIRNI 141
HSG + + RD + ++D+ + G + +A +P ++
Sbjct: 526 --HSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE-PDV 582
Query: 142 VSWTSMLTG 150
W+++L+
Sbjct: 583 RIWSALLSA 591
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/693 (35%), Positives = 387/693 (55%), Gaps = 65/693 (9%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
S S + +S+V ++ + + L K + V +W SVI +AL +F
Sbjct: 36 SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVE 95
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC-- 121
MR P + FP +KSC+ + DL G+ H G D++ +AL++MY+K
Sbjct: 96 MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLG 155
Query: 122 -GELSDARKLFDEIPQRIRN-------------------------------IVSWTSMLT 149
G +FDE+PQR N +VS+ +++
Sbjct: 156 MGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIA 215
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
GY Q+ +AL + +E + ++ DS ++SVL S +
Sbjct: 216 GYAQSGMYEDALRMVREM------------GTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG+VI++G DS+V +G++L+D YA+ ++ S +VF + +D ++WNS++A Y QNG
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 323
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EAL +F QMV + VK AV S+V+ A AHL L LGK +H V++ ++ + +
Sbjct: 324 YNEALRLFRQMV-TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+++DMY KCG + ARK F++M + SWTA+I G+ +H EA+ LF +M + GV+P
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
N + FV+VL+ACSH GLV E W + N+M + + +EHY + DLLGRAGKL+EAY+
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNF 502
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I M V+ VW +LL +C +HKN++L E A+K+F ++ N G +VL+ N+YA+ GRW
Sbjct: 503 ISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRW 562
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
+++ + R M+ + L K P S +E++ K H F+ GD+ HP +KI E+L+ + ++++
Sbjct: 563 KEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKE 622
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GYV D + V+HDVD+E K L HSE+LA N+R+C DCH I
Sbjct: 623 GYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAI 682
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ ISK+ +REI+VRD+ RFH+F G CSCGDYW
Sbjct: 683 KFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/664 (37%), Positives = 375/664 (56%), Gaps = 66/664 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPCAIKSCSALHDLH 90
+ + N F+WN++I A G D V ++ AF M + P + TFP IK+ + + L
Sbjct: 91 IPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLS 150
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G+ H A DVFV+++LI Y CG+L A K+F I ++ ++VSW SM+ G
Sbjct: 151 LGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK--DVVSWNSMING 208
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
+VQ + +AL LFK+ S++V V + VLSAC+++
Sbjct: 209 FVQKGSPDKALELFKKM------------ESEDVKASHVTMVGVLSACAKIRDLEFGRRV 256
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW------------- 257
++ + + + + N ++D Y + G ++ ++++FD M EKD VTW
Sbjct: 257 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 316
Query: 258 ------------------NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
N++I+ Y QNG EAL VF ++ ++K N +TL + L A
Sbjct: 317 EAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSA 376
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A +G L LG+ IH + K ++ + V +++I MY KCG ++ AR+ FN +++++V W
Sbjct: 377 CAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVW 436
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
+AMI G MH EA+D+FYKM +A V+PN +TF +V ACSH GLV E M
Sbjct: 437 SAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMES 496
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
+ I P +HY C+VD+LGR+G L++A IE M + VWG+LLGAC+IH N+ L E
Sbjct: 497 SYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAE 556
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
+A +L ELEP N G HVLLSNIYA +G+W++V R M+ L K PG S +E+ G +
Sbjct: 557 MACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMI 616
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE-KEMTLRIHSEKL 598
H FL GD HP EK+Y L E+ KL+ GY +M+ V+ +++EE KE +L +HSEKL
Sbjct: 617 HEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKL 676
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLR+CGDCH V +LIS++ +REI+VRD RFH+F++G CSC
Sbjct: 677 AICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSC 736
Query: 641 GDYW 644
D+W
Sbjct: 737 NDFW 740
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 225/475 (47%), Gaps = 56/475 (11%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSAL--IDMYSKCGELSDARKLFDEIPQR 137
I CS+L L KQ H G D + +S L I S L ARK+FDEIPQ
Sbjct: 38 IDRCSSLRQL---KQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQ- 93
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
N +W +++ Y + ++ F + + ES+C + + ++ A
Sbjct: 94 -PNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQC----------YPNKYTFPFLIKA 142
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
+ V+ + + HG IK S+V V N+LI Y G +D + KVF + EKD V+W
Sbjct: 143 AAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSW 202
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
NS+I + Q G +AL++F +M +S DVK + VT+ VL A A + L G+ + +
Sbjct: 203 NSMINGFVQKGSPDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIE 261
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM--------- 368
+ + ++ + +++DMY KCG ++ A++ F+ M+EK+ +WT M+ GY +
Sbjct: 262 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 321
Query: 369 ----------------------HCRAREALDLFYKM-IKAGVRPNYITFVSVLSACSHAG 405
+ + EAL +F+++ ++ ++ N IT VS LSAC+ G
Sbjct: 322 VLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVG 381
Query: 406 LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
++ G W+++ + I+ ++ + + G L++A ++ ++ K D VW ++
Sbjct: 382 ALELG-RWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVE-KRDVFVWSAM 439
Query: 466 LGACRIHKNVDLGEIAAKKLFELEPNNCGYH-VLLSNIYANAGRWEDVERTRSLM 519
+G +H G A ++++ N + V +N++ V+ SL
Sbjct: 440 IGGLAMH---GCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 491
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 184/379 (48%), Gaps = 28/379 (7%)
Query: 211 HGFVIKRGFDSEVGVGNTL--IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H +I+ G S+ + L I A + ++ +RKVFD + + ++ TWN++I YA
Sbjct: 51 HAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGP 110
Query: 269 LAAEALDVFDQMVKSTDVKC--NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
++ F MV S++ +C N T ++ A A + L LG+ +H IK + V
Sbjct: 111 DPVCSIWAFLDMV-SSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVF 169
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V S+I Y CG +D A K F +KEK+V SW +MI G+ +AL+LF KM
Sbjct: 170 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 229
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
V+ +++T V VLSAC+ ++ G + + E + + M+D+ + G +++A
Sbjct: 230 VKASHVTMVGVLSACAKIRDLEFGRRVCSYI-EENRVNVNLTLANAMLDMYTKCGSIEDA 288
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNN--CGYHVLLSNIYA 504
L + M+ K D V W ++L I ++ + AA+++ P ++ L+S Y
Sbjct: 289 KRLFDAMEEK-DNVTWTTMLDGYAISEDYE----AAREVLNAMPKKDIVAWNALIS-AYE 342
Query: 505 NAGRWED---VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEE 561
G+ + V L KN +L + S + +V A +G I+ Y+++
Sbjct: 343 QNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELG-------RWIHSYIKK 395
Query: 562 LNVKLQEVGYVTDMTSVIH 580
+K+ YVT +++IH
Sbjct: 396 NGIKMN--FYVT--SALIH 410
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/665 (38%), Positives = 387/665 (58%), Gaps = 69/665 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LFN + +W SVI G ++L +F M L P + FP +KSC+ L
Sbjct: 62 LFNT-IHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLM 120
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD-------ARKLFDEIPQRIRN 140
DL+ G+ H G D++ +AL++MYSK L + A ++FDE+ +R R+
Sbjct: 121 DLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRS 180
Query: 141 I-----------------------VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
+ VSW +++ G NAR L ++E L E GGA
Sbjct: 181 VRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAG-----NARNGL--YEETLRMIREMGGA 233
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
N+ DS ++SVL + + HG I++G D+++ V ++LID YA+
Sbjct: 234 -----NLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
V S +VF + E+D ++WNSIIA QNGL E L F QM+ + +K + + S+++
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMA-KIKPKSYSFSSIM 347
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A AHL L LGK +H + + +E++ + +S++DMY KCG + A++ F++M+ +++
Sbjct: 348 PACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMV 407
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SWTAMI G +H +A +A++LF +M G++ +VL+ACSH GLV E W + N+M
Sbjct: 408 SWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSM 460
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
+F I PGVEHY + DLLGRAG+L+EAYD I GM + +W +LL ACR+HKN+D+
Sbjct: 461 TRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDM 520
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG 537
E A ++ E++PNN G ++LL+NIY+ A RW++ + R+ M+ + KTP S +E++
Sbjct: 521 AEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKN 580
Query: 538 KVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
KV+AF+ GD+ HP +EKI E +E L +++ GYV D + V HDV++E+K+ + HSE+
Sbjct: 581 KVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSER 640
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA NLRVC DCHT + ISK+V REIVVRD+ RFH+FK+G CS
Sbjct: 641 LAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCS 700
Query: 640 CGDYW 644
CGDYW
Sbjct: 701 CGDYW 705
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 114/275 (41%), Gaps = 65/275 (23%)
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
S ++F+ + A+ W S+I Y +GL ++L F M+ S + V +VL + A
Sbjct: 59 SLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV-FPSVLKSCA 117
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK-------------CGQV------- 341
L L LG+ +H +I++ L+ + G ++++MY K G+V
Sbjct: 118 LLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTER 177
Query: 342 ------------DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
D RK F M EK++ SW +IAG + E L + +M A ++P
Sbjct: 178 TRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKP 237
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC---------------MV 434
+ T SVL L+ E +I G E +GC ++
Sbjct: 238 DSFTLSSVLP------LIAE----------NVDISRGKEIHGCSIRQGLDADIYVASSLI 281
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
D+ + ++ ++ + + + D + W S++ C
Sbjct: 282 DMYAKCTRVADSCRVFT-LLTERDGISWNSIIAGC 315
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 259/669 (38%), Positives = 371/669 (55%), Gaps = 66/669 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F K ++N V SW ++I A+ EA + M + ++P TF + SC+
Sbjct: 236 IFQKMKERN-VVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPE 294
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L+ G++ H G DV V++ALI MY KC + DAR+ FD + +R +++SW++M
Sbjct: 295 ALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKR--DVISWSAM 352
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY Q+ + L LLE + VF + V S+L ACS V+G
Sbjct: 353 IAGYAQSGYQDKESLDEVFQLLERMR-------REGVFPNKVTFMSILKACS---VHGAL 402
Query: 208 EGA---HGFVIKRGFDSEVGVGNTLIDAYARGGHV------------------------- 239
E H + K GF+S+ + + + YA+ G +
Sbjct: 403 EQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMY 462
Query: 240 ------DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ KVF M ++ V+WN +IA YAQ+G A+ ++ M K + + VT+
Sbjct: 463 IKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSM-KVEGFQPDRVTI 521
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
++L A L L GK +H + +K+ LE +V TS+I MY KCG+V AR F+++
Sbjct: 522 ISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISN 581
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
++ +W AM+AGYG H EA+DLF +M+K V PN ITF +V+SAC AGLVQEG
Sbjct: 582 RDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREI 641
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
M +F ++PG +HYGCMVDLLGRAG+L+EA + I+ M + D VW +LLGAC+ H
Sbjct: 642 FRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHD 701
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
NV L E AA + LEP+N +V LSNIYA AGRW+D + R +M ++ L K G S +
Sbjct: 702 NVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSI 761
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
E+ G++H F+ D HP+ + I+ LE L +++E GY DM V+HDVD+ +KE L
Sbjct: 762 EIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCH 821
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSEKLA NLRVCGDCHT + ISK+ REIV RD+ RFHYFK+
Sbjct: 822 HSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKN 881
Query: 636 GLCSCGDYW 644
G CSCGD+W
Sbjct: 882 GTCSCGDFW 890
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 262/523 (50%), Gaps = 43/523 (8%)
Query: 48 LARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRD 107
L + G EA++ +++ L +T+ C I+ C+ L GK H+Q G D
Sbjct: 53 LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID 112
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
+++ ++LI+ YSK G+++ ++F + +R++V+W+SM+ Y N++ +A F+
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMT--LRDVVTWSSMIAAYAGNNHPAKAFDTFERM 170
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN 227
N+ + + S+L AC+ ++ H V G +++V V
Sbjct: 171 ------------KDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVAT 218
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
LI Y++ G + ++ ++F M E++ V+W +II AQ+ EA +++++M+++ +
Sbjct: 219 ALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQA-GIS 277
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
NAVT ++L + L G+ IH + + LE V+V ++I MYCKC + AR+
Sbjct: 278 PNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARET 337
Query: 348 FNQMKEKNVRSWTAMIAGYGMH-CRAREALD----LFYKMIKAGVRPNYITFVSVLSACS 402
F++M +++V SW+AMIAGY + +E+LD L +M + GV PN +TF+S+L ACS
Sbjct: 338 FDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACS 397
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW 462
G +++G ++ + E + ++ + G + EA + M+ K + V W
Sbjct: 398 VHGALEQG-RQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENK-NVVAW 455
Query: 463 GSLLGACRIHKNVDLGEI-AAKKLF-ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMK 520
SLL + G++ +A+K+F E+ N L+ YA +G D+ + L+
Sbjct: 456 ASLLTM-----YIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSG---DIAKVFELLS 507
Query: 521 NRRLAKTPGF--------SLVELRGKVHAFLVGDKEHPQHEKI 555
+ K GF S++E G + A G H + K+
Sbjct: 508 S---MKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKL 547
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 239/503 (47%), Gaps = 57/503 (11%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V +W+S+IA A +A F M+ ++ P R TF +K+C+ L ++ H
Sbjct: 143 DVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIH 202
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G DV V++ALI MYSKCGE+S A ++F ++ + RN+VSWT+++ Q+
Sbjct: 203 TVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKE--RNVVSWTAIIQANAQHRK 260
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EA L+++ L G S N +V S+L++C+ H + +
Sbjct: 261 LNEAFELYEKMLQ-----AGISPN-------AVTFVSLLNSCNTPEALNRGRRIHSHISE 308
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA-AEALD 275
RG +++V V N LI Y + + +R+ FD M ++D ++W+++IA YAQ+G E+LD
Sbjct: 309 RGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLD 368
Query: 276 VFDQMV---KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE---------- 322
Q++ + V N VT ++L A + G L G+ IH ++ K+ E
Sbjct: 369 EVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIF 428
Query: 323 ---------------------ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
++V+ S++ MY KCG + A K F++M +NV SW
Sbjct: 429 NMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNL 488
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MIAGY + +L M G +P+ +T +S+L AC ++ G ++ +
Sbjct: 489 MIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERG-KLVHAEAVKL 547
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH----KNVDL 477
+E ++ + + G++ EA + + + + D V W ++L H + VDL
Sbjct: 548 GLESDTVVATSLIGMYSKCGEVTEARTVFDKISNR-DTVAWNAMLAGYGQHGIGPEAVDL 606
Query: 478 GEIAAKKLFELEPNNCGYHVLLS 500
+ K+ + PN + ++S
Sbjct: 607 FKRMLKE--RVPPNEITFTAVIS 627
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/637 (39%), Positives = 379/637 (59%), Gaps = 33/637 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLA-RGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+F+K + K +V +WNS+I+ + G E R M+ ++P ST + + + +
Sbjct: 176 VFDK-MHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQV 233
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ L GK+ H GF DV V + ++D+Y KC + AR++FD + ++N V+W++
Sbjct: 234 NSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGI-VKNEVTWSA 292
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ YV D REAL LF + L+ + D + + +V +A+V+ C+ +T
Sbjct: 293 MVGAYVVCDFMREALELFCQLLMLKD---------DVIVLSAVTLATVIRVCANLTDLST 343
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H + IK GF ++ VGNTL+ YA+ G ++ + + F+ M +DAV++ +II+ Y Q
Sbjct: 344 GTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQ 403
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG + E L +F +M + + + TL++VL A AHL L G C H I +
Sbjct: 404 NGNSEEGLRMFLEM-QLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTM 462
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
+ ++IDMY KCG++D ARK F++M ++ + SW MI YG+H EAL LF M G
Sbjct: 463 ICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEG 522
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
++P+ +TF+ ++SACSH+GLV EG +W N M +F I P +EHY CMVDLL RAG KE
Sbjct: 523 LKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEV 582
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
+ IE M ++ D VWG+LL ACR++KNV+LGE +KK+ +L P + G VLLSN+Y+
Sbjct: 583 HSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAV 642
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD-KEHPQHEKIYEYLEELNVK 565
GRW+D + R K + K+PG S +E+ G VH FL G + HPQ +I L+EL V+
Sbjct: 643 GRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVE 702
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++ +GY + + V DV++EEKE L HSEKLA NLRVCGDC
Sbjct: 703 MKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDC 762
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
HT I+ IS V R+I VRD+ RFH+FKDG+C+CGD+W
Sbjct: 763 HTAIKFISLVTKRDITVRDASRFHHFKDGICNCGDFW 799
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 151/485 (31%), Positives = 246/485 (50%), Gaps = 53/485 (10%)
Query: 19 HSTN-TNLTTLFNKYVD---------------------KNNVFSWNSVIADLARGGDSVE 56
H TN TN F K VD NV WN +I A G E
Sbjct: 43 HETNLTNFDVPFEKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEE 102
Query: 57 ALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
A+ + M +TP R TFP +K+CSAL + G++ H +V+VS+AL+D
Sbjct: 103 AIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVD 162
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE--ALLLFKEFLLEESEC 174
Y+KCG L DA+++FD++ + R++V+W SM++G+ ++ + + A LL
Sbjct: 163 FYAKCGCLDDAKEVFDKMHK--RDVVAWNSMISGFSLHEGSYDEVARLLV---------- 210
Query: 175 GGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYA 234
+ ++V +S I VL A ++V + HGF ++RGF +V VG ++D Y
Sbjct: 211 ----QMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYG 266
Query: 235 RGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAEALDVFDQ--MVKSTDVKCNAV 291
+ +D +R++FD M I K+ VTW++++ Y EAL++F Q M+K + +AV
Sbjct: 267 KCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAV 326
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
TL+ V+ A+L L G C+H IK ++VG +++ MY KCG ++ A + FN+M
Sbjct: 327 TLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEM 386
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
++ S+TA+I+GY + + E L +F +M +G+ P T SVL AC+H G
Sbjct: 387 DLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLA----GL 442
Query: 412 HWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
H+ + H + I G ++D+ + GK+ A + + M K V W +++
Sbjct: 443 HY-GSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMH-KRGIVSWNTMII 500
Query: 468 ACRIH 472
A IH
Sbjct: 501 AYGIH 505
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/671 (37%), Positives = 387/671 (57%), Gaps = 70/671 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSAL 86
LF+K + + ++ +W +I+ L + G S+EA++ ++ R K + P + K+C++L
Sbjct: 33 LFDK-IPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACASL 91
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D+ + K+ H+ A FGF DV + +ALIDMY KC AR +F+ +P R+++SWTS
Sbjct: 92 RDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMP--FRDVISWTS 149
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M + YV REAL F++ L G NS V ++S+L AC+ +
Sbjct: 150 MASCYVNCGLLREALGAFRKMGLN-----GERPNS-------VTVSSILPACTDLKDLKS 197
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY-- 264
HGFV++ G V V + L++ YA + ++ VFD M +D V+WN +I Y
Sbjct: 198 GREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFL 257
Query: 265 ---------------------------------AQNGLAAEALDVFDQMVKSTDVKCNAV 291
QNG +AL+V +M +++ K N +
Sbjct: 258 NKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRM-QNSGFKPNQI 316
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
T+++VL A +L LR GK IH + + + + T+++ MY KCG ++L+R+ F+ M
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM 376
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
+++ SW MI MH EAL LF +M+ +GVRPN +TF VLS CSH+ LV EG
Sbjct: 377 TKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGL 436
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
++M + ++EP +H+ CMVD+L RAG+L+EAY+ I+ M ++ WG+LLG CR+
Sbjct: 437 LIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRV 496
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFS 531
+KNV+LG IAA +LFE+E +N G +VLLSNI +A W + TR LM++R + K PG S
Sbjct: 497 YKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCS 556
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTL 591
+++R +VH F+VGDK + Q ++IY +L+ + K++ GY+ + V+ DVDQEEKE L
Sbjct: 557 WIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVL 616
Query: 592 RIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF 633
HSEKLA NLR+CGDCH I+ ++K+V +I+VRDS RFH+F
Sbjct: 617 CNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHF 676
Query: 634 KDGLCSCGDYW 644
+DGLCSC D+W
Sbjct: 677 RDGLCSCQDFW 687
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 160/304 (52%), Gaps = 14/304 (4%)
Query: 114 LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
I +YS G+L AR LFD+IPQ ++ +WT +++ ++ + EA+ + +F
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQP--DLPTWTILISALTKHGRSLEAIQYYNDF------ 68
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY 233
+ + V D + + SV AC+ + + H I+ GF S+V +GN LID Y
Sbjct: 69 -----RHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMY 123
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ + +R VF+GM +D ++W S+ + Y GL EAL F +M + + + N+VT+
Sbjct: 124 GKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGE-RPNSVTV 182
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
S++L A L L+ G+ +H V++ + +V V +++++MY C + A+ F+ M
Sbjct: 183 SSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSR 242
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
++ SW +I Y ++ + L +F +M+ GV NY ++ +V+ C G ++
Sbjct: 243 RDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEV 302
Query: 414 LNTM 417
L+ M
Sbjct: 303 LSRM 306
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 12/255 (4%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
I Y+ G + +R +FD + + D TW +I+ ++G + EA+ ++ V+
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+ + L +V A A L + K +H+ I+ V++G ++IDMY KC + AR F
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----H 403
M ++V SWT+M + Y REAL F KM G RPN +T S+L AC+
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWG 463
+G G+ N MG + +V++ +++A + + M + D V W
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSA------LVNMYASCLSIRQAQLVFDSMS-RRDTVSWN 249
Query: 464 SLLGACRIHKNVDLG 478
L+ A ++K + G
Sbjct: 250 VLITAYFLNKECEKG 264
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 248/635 (39%), Positives = 365/635 (57%), Gaps = 71/635 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV N +I G E ++ F +M ++ P TFPC +K+CS + G
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ H A G +FV + L+ MY KCG LS+AR + DE+ +R ++VSW S++ GY
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR--DVVSWNSLVVGYA 217
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN +AL + +E S + D+ +AS+L A S T V
Sbjct: 218 QNQRFDDALEVCREM------------ESVKISHDAGTMASLLPAVSNTTTENVM----- 260
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ +F M +K V+WN +I +Y +N + E
Sbjct: 261 ----------------------------YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 292
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A++++ +M ++ + +AV++++VL A L LGK IH + + L ++++ ++I
Sbjct: 293 AVELYSRM-EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG ++ AR F MK ++V SWTAMI+ YG R +A+ LF K+ +G+ P+ I
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
FV+ L+ACSHAGL++EG M + I P +EH CMVDLLGRAGK+KEAY I+
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M ++ + VWG+LLGACR+H + D+G +AA KLF+L P GY+VLLSNIYA AGRWE+V
Sbjct: 472 MSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 531
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R++MK++ L K PG S VE+ +H FLVGD+ HPQ ++IY L+ L K++E+GYV
Sbjct: 532 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYV 591
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------------NLRVCGDCHT 609
D S +HDV++E+KE L +HSEKLA NLR+CGDCH
Sbjct: 592 PDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHV 651
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LIS++ REI++RD+ RFH F+ G+CSCGDYW
Sbjct: 652 AAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 186/416 (44%), Gaps = 54/416 (12%)
Query: 56 EALRAFSSMRKLSL---TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS 112
++ + SS+ KL L +P + F + D+ + + H + + + +
Sbjct: 20 QSRKVSSSLPKLELDQKSPQETVFLLG-QVLDTYPDIRTLRTVHSRIILEDLRCNSSLGV 78
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
L+ Y+ +++ ARK+FDEIP+ RN++ M+ YV N E + +F
Sbjct: 79 KLMRAYASLKDVASARKVFDEIPE--RNVIIINVMIRSYVNNGFYGEGVKVFGTM----- 131
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
CG NV D VL ACS + HG K G S + VGN L+
Sbjct: 132 -CGC------NVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSM 184
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
Y + G + +R V D M +D V+WNS++ YAQN +AL+V +M +S + +A T
Sbjct: 185 YGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM-ESVKISHDAGT 243
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
++++L A+++ E+V MY K F +M
Sbjct: 244 MASLLPAVSNTTT-----------------ENV--------MYVK--------DMFFKMG 270
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
+K++ SW MI Y + EA++L+ +M G P+ ++ SVL AC + G
Sbjct: 271 KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKK 330
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ + + P + ++D+ + G L++A D+ E MK + D V W +++ A
Sbjct: 331 IHGYIERK-KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISA 384
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 16/320 (5%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +I +G L+ AYA V +RKVFD + E++ + N +I Y NG
Sbjct: 62 HSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFY 121
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
E + VF M +V+ + T VL A + G + +G+ IH K+ L ++ VG
Sbjct: 122 GEGVKVFGTMC-GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ MY KCG + AR ++M ++V SW +++ GY + R +AL++ +M + +
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
T S+L A S+ E ++ M + + V + M+ + + EA +L
Sbjct: 241 AGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS-WNVMIGVYMKNAMPVEAVELY 297
Query: 451 EGMKV---KADFVVWGSLLGACRIHKNVDLGE-----IAAKKLFELEPNNCGYHVLLSNI 502
M+ + D V S+L AC + LG+ I KKL PN + L+ ++
Sbjct: 298 SRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI---PNLLLENALI-DM 353
Query: 503 YANAGRWEDVERTRSLMKNR 522
YA G E MK+R
Sbjct: 354 YAKCGCLEKARDVFENMKSR 373
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 257/635 (40%), Positives = 373/635 (58%), Gaps = 34/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ V K+ SWN++IA + +A+R F M + P T+ +K+C++L
Sbjct: 85 VFDALVKKSGA-SWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLS 143
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK+ H G DV V +AL+ MY KCG +++AR++FD + +I+SWT M
Sbjct: 144 ALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNH--DIISWTVM 201
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y Q+ N +EA ++ L E E G N+ + S+L+AC+
Sbjct: 202 IGAYAQSGNGKEA---YRLMLQMEQE--GFKPNA-------ITYVSILNACASEGALKWV 249
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H + G + +V VG L+ YA+ G +D +R VFD M +D V+WN +I +A++
Sbjct: 250 KRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEH 309
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EA D+F QM ++ K +A+ ++L A A G L K IH + LE V V
Sbjct: 310 GRGHEAYDLFLQM-QTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRV 368
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
GT+++ MY K G +D AR F++MK +NV SW AMI+G H ++AL++F +M GV
Sbjct: 369 GTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGV 428
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+P+ +TFV+VLSACSHAGLV EG M + IEP V H CMVDLLGRAG+L EA
Sbjct: 429 KPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAK 488
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I+ M V D WG+LLG+CR + NV+LGE+ AK+ +L+P N +VLLSNIYA AG
Sbjct: 489 LFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAG 548
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+W+ V R++M+ R + K PG S +E+ K+H FLV D HP+ ++I E +++ K++
Sbjct: 549 KWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIK 608
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GY+ D V+ + + ++KE+ + HSEKLA NLRVC DCH
Sbjct: 609 AEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHG 668
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LISKV REI+VRD+ RFH+FKDG+CSCGDYW
Sbjct: 669 ATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 210/397 (52%), Gaps = 25/397 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+K C DL + KQ H ++ V + L+ +Y +CG L +AR +FD + + +
Sbjct: 35 LKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVK--K 92
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+ SW +M+ GYV++ +A +A+ LF+E E G N+ + +L AC+
Sbjct: 93 SGASWNAMIAGYVEHKHAEDAMRLFREMCHE-----GVQPNAGTYMI-------ILKACA 140
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
++ + H + G +S+V VG L+ Y + G ++ +R++FD ++ D ++W
Sbjct: 141 SLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTV 200
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+I YAQ+G EA + QM + K NA+T ++L A A G L+ K +H +
Sbjct: 201 MIGAYAQSGNGKEAYRLMLQM-EQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDA 259
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
LE V VGT+++ MY K G +D AR F++MK ++V SW MI + H R EA DLF
Sbjct: 260 GLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLF 319
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE---HYG-CMVD 435
+M G +P+ I F+S+L+AC+ AG ++ W+ + H ++ G+E G +V
Sbjct: 320 LQMQTEGCKPDAIMFLSILNACASAGALE----WVKKI-HRHALDSGLEVDVRVGTALVH 374
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ ++G + +A + + MKV+ + V W +++ H
Sbjct: 375 MYSKSGSIDDARVVFDRMKVR-NVVSWNAMISGLAQH 410
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 169/339 (49%), Gaps = 18/339 (5%)
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ DS VL C + + H +IK + V N L+ Y G + +R
Sbjct: 24 LITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEAR 83
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VFD +++K +WN++IA Y ++ A +A+ +F +M V+ NA T +L A A L
Sbjct: 84 CVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHE-GVQPNAGTYMIILKACASL 142
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L+ GK +H + LE V VGT+++ MY KCG ++ AR+ F+ + ++ SWT MI
Sbjct: 143 SALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMI 202
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
Y +EA L +M + G +PN IT+VS+L+AC+ G ++ W+ + H +
Sbjct: 203 GAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALK----WVKRV-HRHAL 257
Query: 424 EPGVE---HYG-CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
+ G+E G +V + ++G + +A + + MKV+ D V W ++GA H G
Sbjct: 258 DAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR-DVVSWNVMIGAFAEHGR---GH 313
Query: 480 IAAKKLFELEPNNCGYHVLLS----NIYANAGRWEDVER 514
A +++ C ++ N A+AG E V++
Sbjct: 314 EAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKK 352
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 121/240 (50%), Gaps = 13/240 (5%)
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L K +HD +IK +E++ V +++ +Y +CG++ AR F+ + +K+ SW AMIAG
Sbjct: 44 LMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAG 103
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y H A +A+ LF +M GV+PN T++ +L AC+ ++ G + H +E
Sbjct: 104 YVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHG-GLES 162
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
V ++ + G+ G + EA + + + + D + W ++GA N G+ A + +
Sbjct: 163 DVRVGTALLRMYGKCGSINEARRIFDNL-MNHDIISWTVMIGAYAQSGN---GKEAYRLM 218
Query: 486 FELE-----PNNCGYHVLLSNIYANAGRWEDVERT--RSLMKNRRLAKTPGFSLVELRGK 538
++E PN Y V + N A+ G + V+R +L L G +LV++ K
Sbjct: 219 LQMEQEGFKPNAITY-VSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAK 277
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 257/660 (38%), Positives = 386/660 (58%), Gaps = 68/660 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ WN++ A D V AL+ + M L L P TFP +KSC+ G
Sbjct: 49 IQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEG 108
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR------------------------ 128
+Q H GF D++V ++LI MY++ G L DAR
Sbjct: 109 QQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSR 168
Query: 129 -------KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
KLFDEIP +++VSW +M++GYV+ N +EAL LFKE ++
Sbjct: 169 GYIESAQKLFDEIPG--KDVVSWNAMISGYVETGNYKEALELFKEMMM-----------M 215
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
NV D + +V+SAC++ + H ++ GF S + + N LID Y++ G V+
Sbjct: 216 TNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVET 275
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ ++FDG+ KD ++WN++I Y L EAL +F +M++S + N VT+ ++L A A
Sbjct: 276 ACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP-NDVTMLSILPACA 334
Query: 302 HLGVLRLGKCIH---DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN-QMKEKNVR 357
HLG + +G+ IH ++ +K + + TS+IDMY KCG +D A++ F+ M +++
Sbjct: 335 HLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLS 394
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
+W AMI+G+ MH RA A D+F +M G+ P+ ITFV +LSACSH+G++ G + +M
Sbjct: 395 TWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSM 454
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
+ I P +EHYGCM+DLLG +G KEA ++I M ++ D V+W SLL AC+IH N++L
Sbjct: 455 TRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLEL 514
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRL-AKTPGFSLVELR 536
GE AKKL ++EP N G +VLLSNIYA AGRW +V + R+L+ ++ + K PG S +E+
Sbjct: 515 GESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEID 574
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
VH F++GDK HPQ+ +IY LEE+ V L+E G+V D + V+ ++++E +E LR HSE
Sbjct: 575 SVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSE 634
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLRVC +CH +LISK+ REI+ RD RF +F+DG+C
Sbjct: 635 KLAIAFGLISTKPGTKLTIMKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 142/296 (47%), Gaps = 44/296 (14%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVD---VSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H +IK G + + L++ H D + VFD + E + + WN++ +A +
Sbjct: 8 HAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHALS 67
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
AL ++ M+ S + ++ T +L + A + + G+ IH V+K+ + + V
Sbjct: 68 SDPVSALKLYLVMI-SLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYV 126
Query: 328 GTSIIDMYCKCGQVDLARKA-------------------------------FNQMKEKNV 356
TS+I MY + G+++ ARK F+++ K+V
Sbjct: 127 HTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDV 186
Query: 357 RSWTAMIAGYGMHCRAREALDLFYK-MIKAGVRPNYITFVSVLSACSHAGLVQEGWH--- 412
SW AMI+GY +EAL+LF + M+ VRP+ T V+V+SAC+ + ++ G H
Sbjct: 187 VSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHS 246
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
W+N G N++ ++DL + G+++ A +L +G+ K D + W +L+G
Sbjct: 247 WINDHGFASNLKI----VNALIDLYSKFGEVETACELFDGLWNK-DVISWNTLIGG 297
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 123/280 (43%), Gaps = 31/280 (11%)
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD---LARKAFNQMKEKNVRSWTAMIAGY 366
+ IH Q+IK L + + +++ D A F+ ++E N+ W M G+
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ AL L+ MI G+ P+ TF +L +C+ + + +EG GH +
Sbjct: 65 ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQ---IHGHVLKLGFD 121
Query: 427 VEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI-AAK 483
++ Y ++ + + G+L++A + + + D V + +L+ V G I +A+
Sbjct: 122 LDIYVHTSLISMYAQNGRLEDARKVFD-ISSHRDVVSYTALIAGY-----VSRGYIESAQ 175
Query: 484 KLFELEPNN--CGYHVLLSNIYANAGRWE---DVERTRSLMKNRRLAKTPGFSLV----- 533
KLF+ P ++ ++S Y G ++ ++ + +M N R ++ ++V
Sbjct: 176 KLFDEIPGKDVVSWNAMISG-YVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQ 234
Query: 534 ----ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
EL VH++ + D + KI L +L K EV
Sbjct: 235 SDSIELGRHVHSW-INDHGFASNLKIVNALIDLYSKFGEV 273
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/585 (40%), Positives = 362/585 (61%), Gaps = 35/585 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+ C + + G++ H + V++ + LI +Y+KC L DAR++ DE+P+R
Sbjct: 484 LTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER-- 541
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+VSWT+M++GY Q A EAL LF E L+ S + N F A+VL++C+
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLM--------SGTAPNEF----TFATVLTSCT 589
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ + H VIK F+S + VG++L+D YA+ G + +R+VFDG+ E+D V+ +
Sbjct: 590 SSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTA 649
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
II+ YAQ GL EALD+F ++ + ++ N VT ++VL A++ L L G+ +H V++
Sbjct: 650 IISGYAQLGLDEEALDLFRRLQRE-GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRA 708
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
L V++ S+IDMY KCG + +R+ F+ M E+ V SW AM+ GY H REA++LF
Sbjct: 709 KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELF 768
Query: 380 YKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN-IEPGVEHYGCMVDLL 437
M + V+P+ +TF++VLS CSH G+ G M ++ + EP +EHYGC+VDL
Sbjct: 769 KLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLF 828
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GRAG+++EA++ I+ M + +WGSLLGACR+H+NV +GE A++L E+E N G +V
Sbjct: 829 GRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYV 888
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
+LSN+YA+AGRW+DV R LMK + + K PG S +EL +H F D+ HP+ E+++
Sbjct: 889 ILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFA 948
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
+ EL++K++E GYV +++ V++DVD E+KE L+ HSEKLA
Sbjct: 949 KVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIK 1008
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH + +S+V RE+ +RD RFH+ G CSCGDYW
Sbjct: 1009 NLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 182/362 (50%), Gaps = 29/362 (8%)
Query: 23 TNLTTLFNK------------YVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT 70
T L L+NK + + NV SW ++I+ ++ G + EAL F M
Sbjct: 516 TRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTA 575
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P TF + SC++ G+Q H F +FV S+L+DMY+K G++ +AR++
Sbjct: 576 PNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRV 635
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
FD +P+ R++VS T++++GY Q EAL LF+ E G N V
Sbjct: 636 FDGLPE--RDVVSCTAIISGYAQLGLDEEALDLFRRLQRE-----GMRSN-------YVT 681
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
ASVL+A S + H V++ V + N+LID Y++ G + SR++FD M
Sbjct: 682 YASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP 741
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
E+ ++WN+++ Y+++GL EA+++F M + VK ++VT AVL +H G+ G
Sbjct: 742 ERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGL 801
Query: 311 CIHDQVI--KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYG 367
I +++ K E + ++D++ + G+V+ A + +M E W +++
Sbjct: 802 EIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACR 861
Query: 368 MH 369
+H
Sbjct: 862 VH 863
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/631 (38%), Positives = 372/631 (58%), Gaps = 34/631 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ SW ++I+ L++ EA+R F MR PT+ F AI++C++L + G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H A FG ++FV S L DMYSKCG + DA K+F+E+P ++ VSWT+M+ GY
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP--CKDEVSWTAMIDGYS 118
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ EALL FK+ + EE V +D + S L AC + H
Sbjct: 119 KIGEFEEALLAFKKMIDEE------------VTIDQHVLCSTLGACGALKACKFGRSVHS 166
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWNSIIAIYAQNGLAA 271
V+K GF+S++ VGN L D Y++ G ++ + VF E ++ V++ +I Y +
Sbjct: 167 SVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIE 226
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+ L VF ++ + ++ N T S+++ A A+ L G +H QV+K++ +E V + +
Sbjct: 227 KGLSVFVEL-RRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSIL 285
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+DMY KCG ++ A +AF+++ + +W ++++ +G H ++A+ +F +M+ GV+PN
Sbjct: 286 VDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNA 345
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
ITF+S+L+ CSHAGLV+EG + +M + + PG EHY C++DLLGRAG+LKEA + I
Sbjct: 346 ITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFIN 405
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M + + W S LGACRIH + ++G++AA+KL +LEP N G VLLSNIYAN +WED
Sbjct: 406 RMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWED 465
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
V R M++ + K PG+S V++ K H F D HP+ IYE L+ L +++ GY
Sbjct: 466 VRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGY 525
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
V SV D+D KE L HSE++A NLRVC DCH+ I+
Sbjct: 526 VPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKF 585
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
ISKV R+I+VRD+ RFH+F DG CSCGDYW
Sbjct: 586 ISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 616
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 255/664 (38%), Positives = 379/664 (57%), Gaps = 68/664 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ WN++ A D V A++ + M L L P TFP +KSC+ L G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEG 122
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD-------------------------- 126
+Q H G+ D++V ++LI MY K G D
Sbjct: 123 QQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASR 182
Query: 127 -----ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
A+K+FDEIP ++++VSW ++++GY N +EAL LFKE +
Sbjct: 183 GYIESAQKMFDEIP--VKDVVSWNAIISGYADTGNNKEALDLFKEMM------------K 228
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
NV D + +V+SAC++ + H ++ G S + + N LID Y++ G V+
Sbjct: 229 TNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVET 288
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ +F G+ KD ++WN++I Y L EAL +F +M++S + N VT+ ++L A A
Sbjct: 289 ACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGE-NPNDVTMLSILPACA 347
Query: 302 HLGVLRLGKCIH---DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
LG + G+ IH D+ IK + + + TS+IDMY KCG ++ A + FN M + + +
Sbjct: 348 QLGAIDFGRWIHVYIDKRIK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSA 406
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
AMI G+ MH RA A D+F +M K G+ P+ ITFV +LSACSH+G++ G +M
Sbjct: 407 CNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMT 466
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
+ I P +EHYGCM+DLLG G KEA ++I M ++ D V+W SLL AC++H NV+LG
Sbjct: 467 QNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELG 526
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
E A+KL ++EP N G +VLLSNIYA AGRW +V R+L+ ++ + K PG S +E+
Sbjct: 527 ESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSV 586
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
VH F++GDK HP++ +IY LEE+ V L+E G+V D + V+ ++++E K+ LR HSEKL
Sbjct: 587 VHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKL 646
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVC +CH +LISK+ REI+ RD RFH+F+DG+CSC
Sbjct: 647 AIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSC 706
Query: 641 GDYW 644
DYW
Sbjct: 707 NDYW 710
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD---LARKAFNQMKEKNVRSWTAMIAGY 366
+ IH Q+IK L + + +++ D A F ++E N+ W M G+
Sbjct: 19 RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGH 78
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ A+ L+ MI G+ PN TF +L +C+ + +EG GH +
Sbjct: 79 ALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQ---IHGHVLKLGYE 135
Query: 427 VEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
++ Y ++ + + G+ K+A+ + +G + D V + +L+ ++ +A+K
Sbjct: 136 LDLYVHTSLISMYVKNGRWKDAHKVFDGSSHR-DVVSYTALITGYASRGYIE----SAQK 190
Query: 485 LFELEP 490
+F+ P
Sbjct: 191 MFDEIP 196
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/631 (38%), Positives = 372/631 (58%), Gaps = 34/631 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ SW ++I+ L++ EA+R F MR PT+ F AI++C++L + G
Sbjct: 66 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H A FG ++FV S L DMYSKCG + DA K+F+E+P ++ VSWT+M+ GY
Sbjct: 126 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP--CKDEVSWTAMIDGYS 183
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ EALL FK+ + EE V +D + S L AC + H
Sbjct: 184 KIGEFEEALLAFKKMIDEE------------VTIDQHVLCSTLGACGALKACKFGRSVHS 231
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWNSIIAIYAQNGLAA 271
V+K GF+S++ VGN L D Y++ G ++ + VF E ++ V++ +I Y +
Sbjct: 232 SVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIE 291
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+ L VF ++ + ++ N T S+++ A A+ L G +H QV+K++ +E V + +
Sbjct: 292 KGLSVFVEL-RRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSIL 350
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+DMY KCG ++ A +AF+++ + +W ++++ +G H ++A+ +F +M+ GV+PN
Sbjct: 351 VDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNA 410
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
ITF+S+L+ CSHAGLV+EG + +M + + PG EHY C++DLLGRAG+LKEA + I
Sbjct: 411 ITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFIN 470
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M + + W S LGACRIH + ++G++AA+KL +LEP N G VLLSNIYAN +WED
Sbjct: 471 RMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWED 530
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
V R M++ + K PG+S V++ K H F D HP+ IYE L+ L +++ GY
Sbjct: 531 VRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGY 590
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
V SV D+D KE L HSE++A NLRVC DCH+ I+
Sbjct: 591 VPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKF 650
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
ISKV R+I+VRD+ RFH+F DG CSCGDYW
Sbjct: 651 ISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 223/440 (50%), Gaps = 31/440 (7%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
I++ + L GKQ H G+ F+++ L++MYSKCGEL A KLFD +PQ R
Sbjct: 12 IQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ--R 69
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+VSWT+M++G QN EA+ F + CG A +S + AC+
Sbjct: 70 NLVSWTAMISGLSQNSKFSEAIRTFCGMRI----CGEVPTQ--------FAFSSAIRACA 117
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ + + H +K G SE+ VG+ L D Y++ G + + KVF+ M KD V+W +
Sbjct: 118 SLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTA 177
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+I Y++ G EAL F +M+ +V + L + L A L + G+ +H V+K+
Sbjct: 178 MIDGYSKIGEFEEALLAFKKMIDE-EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKL 236
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDL 378
E + VG ++ DMY K G ++ A F E +NV S+T +I GY + + L +
Sbjct: 237 GFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSV 296
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW-LNTMGHEFNIEPGVEHYGCMVDLL 437
F ++ + G+ PN TF S++ AC++ +++G M F+ +P V +VD+
Sbjct: 297 FVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMY 354
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPN 491
G+ G L++A + + + + W SL+ H LG+ A K+FE ++PN
Sbjct: 355 GKCGLLEQAIQAFDEIGDPTE-IAWNSLVSVFGQH---GLGKDAI-KIFERMVDRGVKPN 409
Query: 492 NCGYHVLLSNIYANAGRWED 511
+ LL+ ++AG E+
Sbjct: 410 AITFISLLTGC-SHAGLVEE 428
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 3/212 (1%)
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
L+ V+ A LR GK +H +I + +++MY KCG++D A K F+ M
Sbjct: 8 LAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP 67
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
++N+ SWTAMI+G + + EA+ F M G P F S + AC+ G ++ G
Sbjct: 68 QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 127
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++ + +F I + + D+ + G + +A + E M K D V W +++
Sbjct: 128 -MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYSKI 185
Query: 473 KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
+ +A KK+ + E HVL S + A
Sbjct: 186 GEFEEALLAFKKMID-EEVTIDQHVLCSTLGA 216
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/570 (42%), Positives = 342/570 (60%), Gaps = 33/570 (5%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H + F +G D + + MY + A +F++IP + W M+ G+
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFL--WNVMIRGFA 794
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ +L L+ + + + D A L +C+ ++ + H
Sbjct: 795 TDGRFLSSLELYSKMM------------EKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQ 842
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++ G +++ V L+D YA+ G ++ +R VFD M +D V+W S+I+ YA NG +E
Sbjct: 843 HLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSE 902
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
L FD M +S+ V N V++ +VLLA +LG LR G+ H VI+ E ++V T+I+
Sbjct: 903 TLGFFDLM-RSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIM 961
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG +DLAR F++ K++ W+AMIA YG+H R+A+DLF +M+KAGVRP+++
Sbjct: 962 DMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHV 1021
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF VLSACSH+GL++EG + M EF I + +Y CMVDLLGRAG+L EA DLIE
Sbjct: 1022 TFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIEN 1081
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M V+ D +WGSLLGACRIH N+DL E A LF L+P + GYHVLLSNIYA RW +V
Sbjct: 1082 MPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEV 1141
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
E+ R +M R K GFSLVE +VH F VGD+ HPQ EK+Y LEEL ++ +GYV
Sbjct: 1142 EKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYV 1201
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
V+HD+++E KE L HSE+LA NLR+CGDCH I+LI
Sbjct: 1202 PLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLI 1261
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+V+R I+VRD RFH F+DG+CSCGDYW
Sbjct: 1262 SKIVNRVILVRDMHRFHRFEDGVCSCGDYW 1291
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/560 (37%), Positives = 337/560 (60%), Gaps = 26/560 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS---LTPTRSTFPCAIKSCS 84
+F ++ + V W S++ + D EAL FS M + L P T + +C+
Sbjct: 161 VFEEFQRPDTVL-WTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPV--TLVSVVSACA 217
Query: 85 ALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
L ++ +G H F D+ + ++L+++Y+K G A LF ++P++ +++SW
Sbjct: 218 QLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEK--DVISW 275
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++M+ Y N+ A EAL LF E + + E +SV + S L AC+ V+ N
Sbjct: 276 STMIACYANNEAANEALNLFHEMIEKRFE------------PNSVTVVSALQACA-VSRN 322
Query: 205 GVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ EG H + +GF+ + V LID Y + D + +F + +KD V+W ++++
Sbjct: 323 -LEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLS 381
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
YAQNG+A +++ VF M+ S ++ +AV + +L A + LG+ + C+H V++
Sbjct: 382 GYAQNGMAYKSMGVFRNML-SDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFN 440
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+V VG S+I++Y KCG + A K F M ++V W++MIA YG+H R EAL++F +M
Sbjct: 441 SNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQM 500
Query: 383 IK-AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
+K + VRPN +TF+S+LSACSHAGLV+EG + M H++ + P EH+G MVDLLGR G
Sbjct: 501 VKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIG 560
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSN 501
+L +A D+I M + A VWG+LLGACRIH N+++GE AAK LF L+P++ GY++LLSN
Sbjct: 561 QLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSN 620
Query: 502 IYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEE 561
IYA G+W++V R+ +K R L K G S+VE+RG VH+FL D+ HP +KIYE L +
Sbjct: 621 IYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRK 680
Query: 562 LNVKLQEVGYVTDMTSVIHD 581
L ++ + Y+ D+ ++HD
Sbjct: 681 LEAQMGKEVYIPDLDFLLHD 700
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 257/482 (53%), Gaps = 47/482 (9%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
NV WNS + R E LR F M P T P A+K+C+ L L GK
Sbjct: 66 NVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVI 125
Query: 96 HQQAFIFGFHR-------DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
H GF + D+FV SAL+++YSKCG++ +A K+F+E QR + V WTSM+
Sbjct: 126 H------GFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEF-QR-PDTVLWTSMV 177
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
TGY QN++ EAL LF + ++ D V +D V + SV+SAC+++
Sbjct: 178 TGYQQNNDPEEALALFSQMVM-----------MDCVVLDPVTLVSVVSACAQLLNVKAGS 226
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
HG VI+R FD ++ + N+L++ YA+ G ++ +F M EKD ++W+++IA YA N
Sbjct: 227 CVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNE 286
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
A EAL++F +M++ + N+VT+ + L A A L GK IH + E V
Sbjct: 287 AANEALNLFHEMIEKR-FEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVS 345
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
T++IDMY KC D A F ++ +K+V SW A+++GY + A +++ +F M+ G++
Sbjct: 346 TALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQ 405
Query: 389 PNYITFVSVLSACSHAGLVQEGW---HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
P+ + V +L+A S G+ Q+ ++ G N+ G +++L + G L +
Sbjct: 406 PDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGAS----LIELYSKCGSLGD 461
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE-------LEPNNCGYHVL 498
A L +GM V+ D V+W S++ A IH GE A ++F+ + PNN + +
Sbjct: 462 AVKLFKGMIVR-DVVIWSSMIAAYGIHGRG--GE--ALEIFDQMVKNSTVRPNNVTFLSI 516
Query: 499 LS 500
LS
Sbjct: 517 LS 518
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 200/367 (54%), Gaps = 25/367 (6%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
V+S+++ K LF+K +K+ V SW+++IA A + EAL F M +
Sbjct: 244 VNSLLNLYAKTGCEKIAANLFSKMPEKD-VISWSTMIACYANNEAANEALNLFHEMIEKR 302
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
P T A+++C+ +L GK+ H+ A GF D VS+ALIDMY KC +A
Sbjct: 303 FEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAV 362
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
LF +P+ +++VSW ++L+GY QN A +++ +F+ L SD + D+
Sbjct: 363 DLFQRLPK--KDVVSWVALLSGYAQNGMAYKSMGVFRNML------------SDGIQPDA 408
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
VA+ +L+A S + + HG+V++ GF+S V VG +LI+ Y++ G + + K+F G
Sbjct: 409 VAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKG 468
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
MI +D V W+S+IA Y +G EAL++FDQMVK++ V+ N VT ++L A +H G++
Sbjct: 469 MIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEE 528
Query: 309 G-----KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAM 362
G + +HD ++ D E I ++D+ + GQ+ A N+M W A+
Sbjct: 529 GLKIFDRMVHDYQLRPDSEHFGI----MVDLLGRIGQLGKAMDIINRMPIPAGPHVWGAL 584
Query: 363 IAGYGMH 369
+ +H
Sbjct: 585 LGACRIH 591
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 183/350 (52%), Gaps = 29/350 (8%)
Query: 39 FSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQ 98
F WN +I A G + +L +S M + L P + FP A+KSC+ L DL GK HQ
Sbjct: 784 FLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQH 843
Query: 99 AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR 158
G D+FV +AL+DMY+KCG++ AR +FD++ +R++VSWTSM++GY N
Sbjct: 844 LVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA--VRDLVSWTSMISGYAHNGYNS 901
Query: 159 EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG 218
E L F S V + V+I SVL AC + E H +VI+ G
Sbjct: 902 ETLGFFDLM------------RSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTG 949
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
F+ ++ V ++D Y++ G +D++R +FD KD V W+++IA Y +G +A+D+FD
Sbjct: 950 FEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFD 1009
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG-----TSIID 333
QMVK+ V+ + VT + VL A +H G+L GK ++ EE VI ++D
Sbjct: 1010 QMVKA-GVRPSHVTFTCVLSACSHSGLLEEGK----MYFQLMTEEFVIARKLSNYACMVD 1064
Query: 334 MYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ + GQ+ A M E + W +++ CR LDL K+
Sbjct: 1065 LLGRAGQLSEAVDLIENMPVEPDASIWGSLLGA----CRIHNNLDLAEKI 1110
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 193/381 (50%), Gaps = 24/381 (6%)
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
S Q H Q F G D F ++ L +Y+KC L ARK+FDE P N+ W S L
Sbjct: 19 SVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHP--NVHLWNSTLRS 76
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y + E L LF + A E DN ++ IA L AC+ + + + +
Sbjct: 77 YCREKQWEETLRLFHLMICT------AGEAPDNF---TIPIA--LKACAGLRMLELGKVI 125
Query: 211 HGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HGF K S++ VG+ L++ Y++ G + + KVF+ D V W S++ Y QN
Sbjct: 126 HGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNND 185
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EAL +F QMV V + VTL +V+ A A L ++ G C+H VI+ + + + +
Sbjct: 186 PEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVN 245
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
S++++Y K G +A F++M EK+V SW+ MIA Y + A EAL+LF++MI+ P
Sbjct: 246 SLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEP 305
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKE 445
N +T VS L AC+ + ++EG H+ + G E ++D+ + E
Sbjct: 306 NSVTVVSALQACAVSRNLEEG-----KKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDE 360
Query: 446 AYDLIEGMKVKADFVVWGSLL 466
A DL + + K D V W +LL
Sbjct: 361 AVDLFQRLP-KKDVVSWVALL 380
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 28/234 (11%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SW S+I+ A G + E L F MR + P R + + +C L L G+ H
Sbjct: 883 DLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFH 942
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
GF D+ V++A++DMYSKCG L AR LFDE +++V W++M+ Y + +
Sbjct: 943 SYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAG--KDLVCWSAMIASYGIHGH 1000
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG------- 209
R+A+ LF + + V V VLSACS + + EG
Sbjct: 1001 GRKAIDLFDQMV------------KAGVRPSHVTFTCVLSACSHSGL--LEEGKMYFQLM 1046
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
FVI R + ++D R G + + + + M +E DA W S++
Sbjct: 1047 TEEFVIARKLSNYA----CMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLG 1096
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 258/649 (39%), Positives = 373/649 (57%), Gaps = 63/649 (9%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS---TFPCAIKSCSALHDLHSGKQAH 96
SW I A G + A+ F MR S+ P S + P A+KSC+ L H
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQMRA-SVAPRSSVPASLPAALKSCAGLGLCTLAASLH 72
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKC---------------GELSDA-----RKLFDEIPQ 136
A G D F ++AL+++ K G L A RK+FDE+ +
Sbjct: 73 ALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLE 132
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL- 195
R + VSW +++ G ++ +EAL + +E D D+ +++VL
Sbjct: 133 R--DAVSWNTLILGCAEHKRHQEALSMVREMW------------RDGFMPDTFTLSTVLP 178
Query: 196 --SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+ C+ + V HG+ IK GFD++V VG++LID YA +D S KVFD + D
Sbjct: 179 IFAECADIKRGMVV---HGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCD 235
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
AV WNS++A YAQNG EAL +F +M+++ V+ VT S+++ A +L +LRLGK +H
Sbjct: 236 AVLWNSMLAGYAQNGSVEEALGIFRRMLQA-GVRPVPVTFSSLIPAFGNLSLLRLGKQLH 294
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+I+ +++ + +S+IDMYCKCG VD+AR+ FN ++ ++ SWTAMI GY +H
Sbjct: 295 AYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTT 354
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
EA LF +M V+PN+ITF++VL+ACSHAGLV GW + N+M +++ P +EH +
Sbjct: 355 EAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAAL 414
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
D LGRAG L EAY+ I MK+K VW +LL ACR+HKN L E AKK+FELEP +
Sbjct: 415 ADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSM 474
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
G HV+LSN+Y+ +GRW + + R M+ + + K P S +E++ K+H F+ DK HP ++
Sbjct: 475 GSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYD 534
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------- 599
+I + L + ++ GYV +M V+ D+++E+K L HSEKLA
Sbjct: 535 RIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTI 594
Query: 600 ----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + ISK+V REIVVRD RFH FKDG CSCGD+W
Sbjct: 595 RVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 173/348 (49%), Gaps = 18/348 (5%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
++ +F++ ++++ V SWN++I A EAL M + P T +
Sbjct: 122 SMRKVFDEMLERDAV-SWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIF 180
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ D+ G H A GF DVFV S+LIDMY+ C ++ + K+FD + V
Sbjct: 181 AECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSD--CDAVL 238
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W SML GY QN + EAL +F+ L V V +S++ A +++
Sbjct: 239 WNSMLAGYAQNGSVEEALGIFRRML------------QAGVRPVPVTFSSLIPAFGNLSL 286
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ + H ++I+ F+ + + ++LID Y + G+VD++R+VF+G+ D V+W ++I
Sbjct: 287 LRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMG 346
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLE 322
YA +G EA +F++M + +VK N +T AVL A +H G++ G K + +
Sbjct: 347 YALHGPTTEAFVLFERM-ELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFV 405
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
S+ ++ D + G +D A ++MK K S W+ ++ +H
Sbjct: 406 PSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVH 453
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 257/664 (38%), Positives = 387/664 (58%), Gaps = 39/664 (5%)
Query: 3 LSKSSSVSSVVSNVD-KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
L+ S S+ ++N+ K + +F++ ++ V +WN+V+A AR G A+ A
Sbjct: 47 LASESIASTALANMYFKCRRPADARRVFDRMPSRDRV-AWNAVVAGYARNGLPSSAMEAV 105
Query: 62 SSMR--KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
M+ + P T + +C+ LH+ ++ H A G V VS+A++D Y
Sbjct: 106 VRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYC 165
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
KCG + AR +FD +P +RN VSW +M+ GY N NA EA+ LF + E
Sbjct: 166 KCGAVEAARAVFDCMP--VRNSVSWNAMIDGYADNGNATEAMALFWRMVQE--------- 214
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
V V ++ + L AC + H +++ G S V V N LI YA+
Sbjct: 215 ---GVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRA 271
Query: 240 DVSRKVFDGMIEKDA-VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
D++ +VF+ + K ++WN++I + QN +A +F +M + +V+ ++ TL +V+
Sbjct: 272 DLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM-QLENVRPDSFTLVSVIP 330
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
A+A + + IH I+ L++ V V T++IDMY KCG+V +AR+ F+ ++++V +
Sbjct: 331 AVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVIT 390
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
W AMI GYG H + A++LF +M G PN TF+SVL+ACSHAGLV EG + +M
Sbjct: 391 WNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMK 450
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
++ +EPG+EHYG MVDLLGRAGKL EA+ I+ M ++ V+G++LGAC++HKNV+L
Sbjct: 451 KDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELA 510
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
E +A+ +FEL P YHVLL+NIYANA W+DV R R+ M+ + L KTPG+S+++L+ +
Sbjct: 511 EESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNE 570
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
VH F G H + IY L +L +++++GYV D T IHDV+ + K L HSEKL
Sbjct: 571 VHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPD-TDSIHDVEDDVKAQLLNTHSEKL 629
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVC DCH +LIS + REI++RD +RFH+FKDG CSC
Sbjct: 630 AIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSC 689
Query: 641 GDYW 644
GDYW
Sbjct: 690 GDYW 693
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 210/418 (50%), Gaps = 20/418 (4%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P TF +K C+A DL +G+ H Q G + S+AL +MY KC +DAR++
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
FD +P R R V+W +++ GY +N A+ + + + E GG DSV
Sbjct: 74 FDRMPSRDR--VAWNAVVAGYARNGLPSSAM---EAVVRMQGEEGGERP-------DSVT 121
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+ SVL AC+ H F ++ G D V V ++DAY + G V+ +R VFD M
Sbjct: 122 LVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMP 181
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+++V+WN++I YA NG A EA+ +F +MV+ V ++ A L A LG L +
Sbjct: 182 VRNSVSWNAMIDGYADNGNATEAMALFWRMVQE-GVDVTDASVLAALQACGELGYLDEVR 240
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR-SWTAMIAGYGMH 369
+H+ ++++ L +V V ++I Y KC + DLA + FN++ K R SW AMI G+ +
Sbjct: 241 RVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQN 300
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
+A LF +M VRP+ T VSV+ A + + W++ ++ V
Sbjct: 301 ECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQA-RWIHGYSIRHQLDQDVYV 359
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
++D+ + G++ A L + + + + W +++ H G+ AA +LFE
Sbjct: 360 LTALIDMYSKCGRVSIARRLFDSARDR-HVITWNAMIHGYGSH---GFGQ-AAVELFE 412
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 258/690 (37%), Positives = 384/690 (55%), Gaps = 66/690 (9%)
Query: 6 SSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM- 64
S+S S + ST LF++ + + N+++WN++I A D ++ F +
Sbjct: 59 SASKLFTASALSSFSTLDYARNLFDQ-IPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLL 117
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
K P + TFP IK+ S L G H A F D+++ ++L+ Y CG+L
Sbjct: 118 DKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDL 177
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
S A +LF I +++VSW SM++ + Q + +AL LF + +NV
Sbjct: 178 SMAERLFKGI--SCKDVVSWNSMISAFAQGNCPEDALELFLKM------------ERENV 223
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
+SV + VLSAC++ ++ ++G ++ + N ++D Y + G VD ++K
Sbjct: 224 MPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQK 283
Query: 245 VFDGMIEKDAVTW-------------------------------NSIIAIYAQNGLAAEA 273
+FD M E+D +W N +I+ Y QNG EA
Sbjct: 284 LFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEA 343
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L +F+++ S K + VTL + L A A LG + LG IH + + + + + +S++D
Sbjct: 344 LAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVD 403
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY KCG ++ A + F ++E++V W+AMIAG GMH R + A+DLF++M +A V+PN +T
Sbjct: 404 MYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVT 463
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
F +VL ACSHAGLV EG + + M + + P ++HY CMVD+LGRAG L+EA +LI M
Sbjct: 464 FTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEM 523
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
VWG+LLGAC +H NV+LGE+A+ +L +LEP N G VLLSNIYA GRWE V
Sbjct: 524 STTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVS 583
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
R LM++ L K PG S +E G VH FLVGD HP IY LEE+ KL+ VGY
Sbjct: 584 ELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEP 643
Query: 574 DMTSVIHDVDQEE-KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
+ + ++ +++++ KE L +HSEKLA NLR+CGDCH +L+
Sbjct: 644 NKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLV 703
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S+V DR+I++RD RFH+F+DG CSC DYW
Sbjct: 704 SRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 158/344 (45%), Gaps = 11/344 (3%)
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH--VDVSRKVFDGMIE 251
+LS + + + + H +++ G + + L A A +D +R +FD + +
Sbjct: 28 ILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQ 87
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
+ TWN++I YA + ++ +F ++ + N T V+ A + L R+G
Sbjct: 88 PNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTA 147
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
+H IK+ + + S++ Y CG + +A + F + K+V SW +MI+ +
Sbjct: 148 VHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNC 207
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
+AL+LF KM + V PN +T V VLSAC+ ++ G W+ + I+ +
Sbjct: 208 PEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFG-RWVCSYIERKGIKVDLTLCN 266
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPN 491
M+D+ + G + +A L + M + D W +L + D AA+ +F P
Sbjct: 267 AMLDMYTKCGSVDDAQKLFDEMPER-DVFSWTIMLDGYAKMGDYD----AARLVFNAMPV 321
Query: 492 N--CGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
++VL+S Y G+ ++ + ++ ++AK +LV
Sbjct: 322 KEIAAWNVLIS-AYEQNGKPKEALAIFNELQLSKIAKPDEVTLV 364
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 269/661 (40%), Positives = 382/661 (57%), Gaps = 55/661 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRK-LSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
++ SWNS++A +GGDS+ A++ F M + L + P + + +C+++ GKQ
Sbjct: 194 DLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQV 253
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H A G DVFV +A++DMY+KCG + +A K+F+ + +++++VSW +M+TGY Q
Sbjct: 254 HGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERM--KVKDVVSWNAMVTGYSQIG 311
Query: 156 NAREALLLFKEFLLEESECG--------------GASENSDNVF---------VDSVAIA 192
+AL LF++ E+ E G + +VF + V +
Sbjct: 312 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLV 371
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFD-------SEVGVGNTLIDAYARGGHVDVSRKV 245
S+LS C+ + H IK + ++ V N LID Y++ +R +
Sbjct: 372 SLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 431
Query: 246 FDGMIEKD--AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD-VKCNAVTLSAVLLAIAH 302
FD + KD VTW +I AQ+G A EAL++F QM++ + V NA T+S L+A A
Sbjct: 432 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 491
Query: 303 LGVLRLGKCIHDQVIKMDLEESVI-VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
LG LR G+ IH V++ E +++ V +IDMY K G VD AR F+ M ++N SWT+
Sbjct: 492 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 551
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
++ GYGMH R EAL +FY+M K G+ P+ +TFV VL ACSH+G+V +G ++ N M +F
Sbjct: 552 LMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 611
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
+ PG EHY CMVDLL RAG+L EA +LI GM +K VW +LL ACR++ NV+LGE A
Sbjct: 612 GVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYA 671
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
A +L ELE N G + LLSNIYANA W+DV R R LMKN + K PG S V+ R
Sbjct: 672 ANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTAT 731
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
F GD HP ++IY+ L +L +++ +GYV D +HDVD EEK L HSEKLA
Sbjct: 732 FFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALA 791
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
NLR CGDCH+ IS +++ EI+VRDS RFH+FK+G CSC Y
Sbjct: 792 YGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGY 851
Query: 644 W 644
W
Sbjct: 852 W 852
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 253/523 (48%), Gaps = 73/523 (13%)
Query: 19 HSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC 78
+S L+ L + + VF WN +I G + L+ + M++L P TFP
Sbjct: 72 NSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPF 131
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR- 137
+K+C + G H F GF +VFV + L+ MY +CG +AR++FDE+ +R
Sbjct: 132 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG 191
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ ++VSW S++ Y+Q ++ A+ +F E + E+ + D+V++ +VL A
Sbjct: 192 VGDLVSWNSIVAAYMQGGDSIRAMKMF-ERMTEDL----------GIRPDAVSLVNVLPA 240
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-------- 249
C+ V + HG+ ++ G +V VGN ++D YA+ G ++ + KVF+ M
Sbjct: 241 CASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSW 300
Query: 250 ---------------------------IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
IE + VTW+++IA YAQ GL EALDVF QM +
Sbjct: 301 NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQM-R 359
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK--MDLEES-----VIVGTSIIDMY 335
+ N VTL ++L A G L GK H IK ++L+E+ ++V ++IDMY
Sbjct: 360 LCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMY 419
Query: 336 CKCGQVDLARKAFNQM--KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG--VRPNY 391
KC AR F+ + K+++V +WT +I G H A EAL+LF +M++ V PN
Sbjct: 420 SKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNA 479
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH-----YGCMVDLLGRAGKLKEA 446
T L AC+ G ++ G H + + E C++D+ ++G + A
Sbjct: 480 FTISCALMACARLGALRFG-----RQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAA 534
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
+ + M + + V W SL+ +H GE A + +E++
Sbjct: 535 RVVFDNMHQR-NGVSWTSLMTGYGMHGR---GEEALQIFYEMQ 573
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 191/394 (48%), Gaps = 34/394 (8%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKN---NVFSWNSVIADLARGGDSVEA 57
MK+ S +++V+ + + LF K ++ NV +W++VIA A+ G EA
Sbjct: 292 MKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEA 351
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFH-------RDVFV 110
L F MR P T + C+ L GK+ H A + + D+ V
Sbjct: 352 LDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMV 411
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+ALIDMYSKC AR +FD IP + R++V+WT ++ G Q+ A EAL LF + L
Sbjct: 412 INALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQML-- 469
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE-VGVGNTL 229
+ + V ++ I+ L AC+R+ H +V++ F+S + V N L
Sbjct: 470 --------QPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCL 521
Query: 230 IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCN 289
ID Y++ G VD +R VFD M +++ V+W S++ Y +G EAL +F +M K V +
Sbjct: 522 IDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVP-D 580
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS----IIDMYCKCGQVDLAR 345
VT VL A +H G++ G + M+ + V+ G ++D+ + G++D A
Sbjct: 581 GVTFVVVLYACSHSGMVDQGINYFN---GMNKDFGVVPGAEHYACMVDLLSRAGRLDEAM 637
Query: 346 KAFNQMKEKNVRS-WTAMIAGYGMHCRAREALDL 378
+ M K + W A+++ CR ++L
Sbjct: 638 ELIRGMPMKPTPAVWVALLSA----CRVYANVEL 667
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 196/454 (43%), Gaps = 72/454 (15%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L S + HQQ + G D + +I MY + A + + + W ++
Sbjct: 42 LASAELIHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLI 98
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
V + L L++ G ++ FV L AC +
Sbjct: 99 RRSVHLGFLEDVLQLYRRM----QRLGWRPDHYTFPFV--------LKACGEIPSFRCGA 146
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK---DAVTWNSIIAIYA 265
H V GF+ V VGN L+ Y R G + +R+VFD M E+ D V+WNSI+A Y
Sbjct: 147 SVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYM 206
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q G + A+ +F++M + ++ +AV+L VL A A +G GK +H ++ L E V
Sbjct: 207 QGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV 266
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY----------GMHCRAR-- 373
VG +++DMY KCG ++ A K F +MK K+V SW AM+ GY G+ + R
Sbjct: 267 FVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREE 326
Query: 374 -----------------------EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
EALD+F +M G PN +T VS+LS C+ AG + G
Sbjct: 327 KIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHG 386
Query: 411 -------WHWLNTMGHEFNIEPG--VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
W+ + +PG + ++D+ + K A + + + K VV
Sbjct: 387 KETHCHAIKWILNLDEN---DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVV 443
Query: 462 -WGSLLGACRIHKNVDLGEIAAKKLFE--LEPNN 492
W L+G H + A +LF L+P+N
Sbjct: 444 TWTVLIGGNAQHGEAN----EALELFSQMLQPDN 473
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 269/694 (38%), Positives = 399/694 (57%), Gaps = 67/694 (9%)
Query: 2 KLSKSSS--VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
KL +S+S V V+S+ S+ ++FN + K N + +L+R + + L
Sbjct: 50 KLDRSTSLLVKLVISSCALSSSLDYALSVFN-LIPKPETHLCNRFLRELSRSEEPEKTLL 108
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
+ MR L R +FP +K+ S + L G + H A GF D FV + L+ MY+
Sbjct: 109 VYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYA 168
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
CG +++AR +FD++ R ++V+W+ M+ GY Q+ +ALLLF+E
Sbjct: 169 ACGRIAEARLMFDKMFHR--DVVTWSIMIDGYCQSGLFNDALLLFEEM------------ 214
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
+ NV D + +++VLSAC R + H F+++ + + + L+ YA G +
Sbjct: 215 KNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSM 274
Query: 240 DVS-------------------------------RKVFDGMIEKDAVTWNSIIAIYAQNG 268
D++ R VF+ M++KD V W+++I+ YA++
Sbjct: 275 DLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESD 334
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
EAL++F++M +S +K + VT+ +V+ A AHLG L K IH V K ++ +
Sbjct: 335 SPQEALNLFNEM-QSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPIN 393
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
++I+MY KCG ++ AR+ F++M KNV SWT MI+ + MH A AL F++M +
Sbjct: 394 NALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIE 453
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
PN ITFV VL ACSHAGLV+EG +M +E NI P HYGCMVDL GRA L+EA +
Sbjct: 454 PNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALE 513
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
L+E M + + ++WGSL+ ACR+H ++LGE AAK+L EL+P++ G HV LSNIYA A R
Sbjct: 514 LVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARR 573
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
WEDV + R LMK++ ++K G S EL ++H FLV D+ H ++IYE L E+ KL+
Sbjct: 574 WEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKL 633
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
VGY + S++ D+++EEK+ + HSEKLA NLRVC DCHT
Sbjct: 634 VGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTF 693
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+L SKV +REIVVRD RFH++KDG+CSC DYW
Sbjct: 694 IKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/654 (38%), Positives = 376/654 (57%), Gaps = 36/654 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
SS++S + K +F+ +K+ V WNS+I + G A + F M +
Sbjct: 169 SSMISFLVKFGKIGEAQRVFDGMPNKD-VVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGI 227
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P+ T I++C + +L GK H G D+ V ++ +DMYSK G++ AR
Sbjct: 228 KPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARW 287
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F ++P R N+VSW +M++G V+N E+ LF + GG D
Sbjct: 288 VFYKMPTR--NLVSWNAMISGCVRNGLVGESFDLFHRLV---RSSGG---------FDLT 333
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
I S+L CS+ + HG I R F+S + + ++D Y++ G + + VF+ M
Sbjct: 334 TIVSLLQGCSQTASLATGKILHGCAI-RSFESNLILSTAIVDLYSKCGSLKQATFVFNRM 392
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+++ +TW +++ AQNG A +AL +F QM + + N+VT +++ + AHLG L+ G
Sbjct: 393 KDRNVITWTAMLVGLAQNGHAEDALRLFAQM-QEEGIAANSVTFVSLVHSCAHLGSLKRG 451
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGM 368
+ IH + ++ ++ T+++DMY KCG+++LA + F+ K+V W +MI GYGM
Sbjct: 452 RSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGM 511
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H +A+ +++KMI+ G++PN TF+S+LSACSH+ LV++G N+M + NI P +
Sbjct: 512 HGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEK 571
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HY C+VDLL RAG+ +EA LIE M + V +LL CR HKN++LG + KL L
Sbjct: 572 HYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLAL 631
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
+ N G +++LSNIYA A RW+ V+ R LM+NR L KTPG+SLVE VH F GD
Sbjct: 632 DAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNS 691
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
HP E+IY +LE L ++ GYV D + V+ DVD+E K L HSE+LA
Sbjct: 692 HPNWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTP 751
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCHTV + ISK+V REI+VRD+ RFH+F +G CSCGDYW
Sbjct: 752 AGSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 244/477 (51%), Gaps = 24/477 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+++ + N+++ + G E L F MR +L + A+K+C++
Sbjct: 86 VFDQFFQPKGLLC-NAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSL 144
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G + A G ++ FV S++I K G++ +A+++FD +P +++V W S+
Sbjct: 145 DYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPN--KDVVCWNSI 202
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GYVQ A LF E + + + + S++ AC + +
Sbjct: 203 IGGYVQAGCFDVAFQLFFEM------------HGSGIKPSPITMTSLIQACGGIGNLKLG 250
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG+V+ G +++ V + +D Y++ G ++ +R VF M ++ V+WN++I+ +N
Sbjct: 251 KCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRN 310
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL E+ D+F ++V+S+ + T+ ++L + L GK +H I+ E ++I+
Sbjct: 311 GLVGESFDLFHRLVRSSG-GFDLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLIL 368
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
T+I+D+Y KCG + A FN+MK++NV +WTAM+ G + A +AL LF +M + G+
Sbjct: 369 STAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGI 428
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE--HYGCMVDLLGRAGKLKE 445
N +TFVS++ +C+H G ++ G + GH F + + + +VD+ + GK+
Sbjct: 429 AANSVTFVSLVHSCAHLGSLKRG---RSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINL 485
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--LEPNNCGYHVLLS 500
A + + D V+W S++ +H + K+ E L+PN + LLS
Sbjct: 486 AERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLS 542
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 185/376 (49%), Gaps = 22/376 (5%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K H Q D FV++ L+ YS L AR +FD+ Q + + +ML GY+
Sbjct: 49 KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCN--AMLCGYL 106
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+ RE L LF S N+ VDS + L AC+ +
Sbjct: 107 QSGRYRETLELFGLM------------RSRNLEVDSCSCTFALKACASSLDYEMGMEIIS 154
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+++G + VG+++I + G + +++VFDGM KD V WNSII Y Q G
Sbjct: 155 SAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDV 214
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A +F +M + +K + +T+++++ A +G L+LGKC+H V+ + L ++V TS +
Sbjct: 215 AFQLFFEM-HGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFV 273
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY K G ++ AR F +M +N+ SW AMI+G + E+ DLF++++++ +
Sbjct: 274 DMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLT 333
Query: 393 TFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
T VS+L CS + G H E N+ +VDL + G LK+A +
Sbjct: 334 TIVSLLQGCSQTASLATGKILHGCAIRSFESNLILST----AIVDLYSKCGSLKQATFVF 389
Query: 451 EGMKVKADFVVWGSLL 466
MK + + + W ++L
Sbjct: 390 NRMKDR-NVITWTAML 404
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 267/675 (39%), Positives = 386/675 (57%), Gaps = 70/675 (10%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKL---SLTPTRS---TFPCAIKSCSALHDL 89
++V SWNS++A +G + AL FS M + T RS + + +C++L L
Sbjct: 216 DDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKAL 275
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
K+ H A G D FV +ALID Y+KCG ++DA K+F+ + +++VSW +M+T
Sbjct: 276 PQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVM--EFKDVVSWNAMVT 333
Query: 150 GYVQNDNAREALLLFKEFLLEESECG--------------GASENSDNVF---------V 186
GY Q+ N A LF+ E G S+ + + F
Sbjct: 334 GYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEP 393
Query: 187 DSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDS------------EVGVGNTLIDA 232
+SV I S+LSAC+ ++ +++G H + +K+ S ++ V N LID
Sbjct: 394 NSVTIISLLSACA--SLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDM 451
Query: 233 YARGGHVDVSRKVFDGMI--EKDAVTWNSIIAIYAQNGLAAEALDVFDQMV-KSTDVKCN 289
Y++ +R +FD + E++ VTW +I YAQ G + +AL +F +M+ K V N
Sbjct: 452 YSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPN 511
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESV-IVGTSIIDMYCKCGQVDLARKA 347
A T+S +L+A AHL LR+GK IH V + + E SV V +IDMY KCG VD AR
Sbjct: 512 AYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNV 571
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F+ M ++N SWT+M++GYGMH R +EALD+F KM KAG P+ I+F+ +L ACSH+G+V
Sbjct: 572 FDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMV 631
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+G ++ + M ++++ EHY C++DLL R G+L +A+ I+ M ++ V+W +LL
Sbjct: 632 DQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLS 691
Query: 468 ACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKT 527
ACR+H NV+L E A KL ++ N G + L+SNIYANA RW+DV R R LMK + K
Sbjct: 692 ACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKR 751
Query: 528 PGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEK 587
PG S V+ + +F VGD+ HP +IY LE L +++ +GYV + +HDVD EEK
Sbjct: 752 PGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEK 811
Query: 588 EMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
L HSEKLA NLRVCGDCH+ ISK+VD EI+VRDS R
Sbjct: 812 NNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIVRDSSR 871
Query: 630 FHYFKDGLCSCGDYW 644
FH+FK+G CSCG YW
Sbjct: 872 FHHFKNGSCSCGGYW 886
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 233/487 (47%), Gaps = 65/487 (13%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN ++ + + G A+ M + P T P A+K+C L G+ H
Sbjct: 117 WNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLIC 176
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR-IRNIVSWTSMLTGYVQNDNARE 159
GF +VFV +AL+ MYS+CG L DA +FDEI ++ I +++SW S++ +V+ N R
Sbjct: 177 CNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRT 236
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
AL LF E + E + N D ++I ++L AC+ + + H + I+ G
Sbjct: 237 ALELFSEMSMI------VHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGT 290
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGM------------------------------ 249
++ V N LID YA+ G ++ + KVF+ M
Sbjct: 291 FADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFEN 350
Query: 250 -----IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
I D +TW+++IA YAQ G + EALD F QM+ + N+VT+ ++L A A LG
Sbjct: 351 MRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGS-EPNSVTIISLLSACASLG 409
Query: 305 VLRLGKCIHDQVIKMDL------------EESVIVGTSIIDMYCKCGQVDLARKAFNQM- 351
L G IH +K L E ++V ++IDMY KC AR F+ +
Sbjct: 410 ALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIP 469
Query: 352 -KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA--GVRPNYITFVSVLSACSHAGLVQ 408
+E+NV +WT MI GY + + +AL +F +MI V PN T +L AC+H ++
Sbjct: 470 RRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALR 529
Query: 409 EG--WHWLNTMGHEFNIEPGVEHYG-CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
G H T HE+ EP V C++D+ + G + A ++ + M K + V W S+
Sbjct: 530 MGKQIHAYVTRHHEY--EPSVYFVANCLIDMYSKCGDVDTARNVFDSMP-KRNEVSWTSM 586
Query: 466 LGACRIH 472
+ +H
Sbjct: 587 MSGYGMH 593
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 133/264 (50%), Gaps = 31/264 (11%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ NV +W +I A+ GDS +AL+ FS M + ++ P T C + +C+ L L G
Sbjct: 472 ERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMG 531
Query: 93 KQAHQQAFIFGFHRD----VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
KQ H A++ H FV++ LIDMYSKCG++ AR +FD +P+ RN VSWTSM+
Sbjct: 532 KQIH--AYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPK--RNEVSWTSMM 587
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
+GY + +EAL +F + D ++ +L ACS + V +
Sbjct: 588 SGYGMHGRGKEALDIFDKM------------QKAGFVPDDISFLVLLYACSHSGM--VDQ 633
Query: 209 GAHGF-VIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA-- 262
G + F +++R +D + +ID AR G +D + K M +E AV W ++++
Sbjct: 634 GLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSAC 693
Query: 263 -IYAQNGLAAEALDVFDQMVKSTD 285
+++ LA AL+ M D
Sbjct: 694 RVHSNVELAEYALNKLVNMKAEND 717
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 126/282 (44%), Gaps = 24/282 (8%)
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
+ S +G ++ +Y G + V + + AV WN ++ + + G A+ V
Sbjct: 79 YVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSC 138
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
+M+++ K + TL L A L G+ +H + E +V V +++ MY +C
Sbjct: 139 RMLRA-GTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRC 197
Query: 339 GQVDLARKAFNQMKEK---NVRSWTAMIAGYGMHCRAREALDLFYKMI------KAGVRP 389
G ++ A F+++ K +V SW +++A + R AL+LF +M R
Sbjct: 198 GSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERS 257
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV--EHYGC--MVDLLGRAGKLKE 445
+ I+ V++L AC+ + + + + H + I G + + C ++D + G + +
Sbjct: 258 DIISIVNILPACASLKALPQ----IKEI-HSYAIRNGTFADAFVCNALIDTYAKCGSMND 312
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
A + M+ K D V W +++ N AA +LFE
Sbjct: 313 AVKVFNVMEFK-DVVSWNAMVTGYTQSGNFG----AAFELFE 349
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 16 VDKHSTNTNLTTLFNKY--VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTR 73
+D +S ++ T N + + K N SW S+++ G EAL F M+K P
Sbjct: 556 IDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDD 615
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDV-FVSSA-----LIDMYSKCGELSDA 127
+F + +CS HSG + RD V+SA +ID+ ++CG L A
Sbjct: 616 ISFLVLLYACS-----HSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKA 670
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
K E+P ++ W ++L+ + N A + + ++E G+ N++ +
Sbjct: 671 WKTIQEMPMEPSAVI-WVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYAN 729
Query: 188 S 188
+
Sbjct: 730 A 730
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/633 (38%), Positives = 377/633 (59%), Gaps = 35/633 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +V +WN++++ L R + +A+ M + T + C L D
Sbjct: 128 MPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALA 187
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H A G ++FV +ALID+Y K G L++A +F + +R++V+W S+++
Sbjct: 188 LVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGM--ALRDLVTWNSIISANE 245
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q A+ LF ++E C D + + S+ SA ++ + H
Sbjct: 246 QGGKVAAAVELFHG-MMESGVC-----------PDVLTLVSLASAVAQCGDELGAKSVHC 293
Query: 213 FVIKRGFD-SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+V +RG+D ++ GN ++D YA+ +D ++KVFD + ++D V+WN++I Y QNGLA
Sbjct: 294 YVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLAN 353
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA+ +++ M +K T +VL A ++LG L+ G +H IK L V V T +
Sbjct: 354 EAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCL 413
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
ID+Y KCG++ A F M ++ W A+IAG G+H +AL LF +M + ++P++
Sbjct: 414 IDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDH 473
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+TFVS+L+ACSHAGLV +G + + M + I P +HY CMVD+LGRAG+L EA++ I+
Sbjct: 474 VTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQ 533
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M +K D VWG+LLGACRIH NV++G++A++ LFEL+P N GY+VL+SN+YA G+W+
Sbjct: 534 SMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDG 593
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK--EHPQHEKIYEYLEELNVKLQEV 569
V+ RSL++ + L KTPG+S +E++G V F G + HPQHE+I L +L K++
Sbjct: 594 VDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSA 653
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GYV D + V+ DV+++EKE L HSE+LA NLRVCGDCH+
Sbjct: 654 GYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSAT 713
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ ISK+ +REI+VRD+ RFH+FKDG CSCGD+W
Sbjct: 714 KYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 210/412 (50%), Gaps = 31/412 (7%)
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF-HRDVFVSSALIDMYSKCGELSD 126
L P TFP +++ S Q H A G H +VF S +L+ Y + G +++
Sbjct: 64 PLRPDSFTFPPLVRAAPGPA---SAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAE 120
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
A ++FDE+P+ R++ +W +ML+G +N A +A+ L + + V
Sbjct: 121 AYRVFDEMPE--RDVPAWNAMLSGLCRNTRAADAVTLLGRMV------------GEGVAG 166
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D+V ++SVL C + + H + +K G E+ V N LID Y + G + + VF
Sbjct: 167 DAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVF 226
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
GM +D VTWNSII+ Q G A A+++F M++S V + +TL ++ A+A G
Sbjct: 227 GGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMES-GVCPDVLTLVSLASAVAQCGDE 285
Query: 307 RLGKCIHDQVIKMDLE-ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
K +H V + + +I G +++DMY K ++D A+K F+ + +++V SW +I G
Sbjct: 286 LGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITG 345
Query: 366 YGMHCRAREALDLFYKMIK-AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
Y + A EA+ ++ M G++P TFVSVL A S+ G +Q+G H +I+
Sbjct: 346 YMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRM-----HALSIK 400
Query: 425 PG----VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G V C++DL + GKL EA L E M ++ W +++ +H
Sbjct: 401 TGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTG-PWNAIIAGLGVH 451
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 33/210 (15%)
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F +V++ +A L H LRLG L +V S++ Y
Sbjct: 72 FPPLVRAAPGPASAAQL--------HACALRLGL----------LHPNVFASGSLVHAYL 113
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
+ G+V A + F++M E++V +W AM++G + RA +A+ L +M+ GV + +T S
Sbjct: 114 RFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSS 173
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGV--EHYGC--MVDLLGRAGKLKEAYDLIEG 452
VL C V G L + H + ++ G+ E + C ++D+ G+ G L EA+ + G
Sbjct: 174 VLPMC-----VVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGG 228
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
M ++ D V W S++ A N G++AA
Sbjct: 229 MALR-DLVTWNSIISA-----NEQGGKVAA 252
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+++ + + WN++IA L G +AL FS M++ + P TF + +CS H
Sbjct: 431 EHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACS-----H 485
Query: 91 SGKQAHQQAF------IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
+G ++F ++G + ++DM + G+L +A + +P + + V W
Sbjct: 486 AGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAV-W 544
Query: 145 TSML 148
++L
Sbjct: 545 GALL 548
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/585 (41%), Positives = 361/585 (61%), Gaps = 36/585 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+K C+ L+ L+ GK H F D+ + + L+++Y+KCG+L ARKLFDE+ R
Sbjct: 22 LKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR-- 79
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++V+WT+++TGY Q+D ++ALLL E L + + +AS+L A S
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEML------------RIGLKPNQFTLASLLKAAS 127
Query: 200 RVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
V V +G HG ++ G+DS V V ++D YAR H++ ++ +FD M+ K+ V+W
Sbjct: 128 GVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSW 187
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N++IA YA+ G +A +F M++ +VK T S+VL A A +G L GK +H +I
Sbjct: 188 NALIAGYARKGQGDKAFCLFSNMLRE-NVKPTHFTYSSVLCACASMGSLEQGKWVHALMI 246
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
K + VG +++DMY K G ++ A+K F+++ +++V SW +M+ GY H + AL
Sbjct: 247 KWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQ 306
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
F +M++ + PN ITF+ VL+ACSHAGL+ EG H+ + M ++N+EP + HY MVDLL
Sbjct: 307 RFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMM-KKYNVEPQISHYVTMVDLL 365
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GRAG L A I M +K VWG+LLGACR+HKN++LG AA+ +FEL+ + G HV
Sbjct: 366 GRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHV 425
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
LL NIYA AGRW D + R +MK + K P S VE+ +VH F+ D HPQ +I+
Sbjct: 426 LLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHN 485
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
E+++ K++E+GYV D + V+ +DQ+E+E L+ HSEKLA
Sbjct: 486 MWEQISDKIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKK 545
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
N+R+CGDCH+ + +SK+V+REI+VRD+ RFH+F DG CSC DYW
Sbjct: 546 NIRICGDCHSAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 177/319 (55%), Gaps = 21/319 (6%)
Query: 193 SVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
++L C+ + N + EG H ++ F ++ + NTL++ YA+ G + +RK+FD M
Sbjct: 20 TLLKRCTHL--NKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMS 77
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG---VLR 307
+D VTW ++I Y+Q+ +AL + +M++ +K N TL+++L A + +G VL+
Sbjct: 78 SRDVVTWTALITGYSQHDRPQDALLLLPEMLR-IGLKPNQFTLASLLKAASGVGSTDVLQ 136
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
G+ +H ++ + +V V +I+DMY +C ++ A+ F+ M KN SW A+IAGY
Sbjct: 137 -GRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYA 195
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+ +A LF M++ V+P + T+ SVL AC+ G +++G W++ + ++ E V
Sbjct: 196 RKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQG-KWVHALMIKWG-EKLV 253
Query: 428 EHYG-CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
G ++D+ ++G +++A + + + K D V W S+L H LG++A ++
Sbjct: 254 AFVGNTLLDMYAKSGSIEDAKKVFDRL-AKRDVVSWNSMLTGYSQH---GLGKVALQRFE 309
Query: 487 EL-----EPNNCGYHVLLS 500
E+ PN+ + +L+
Sbjct: 310 EMLRTRIAPNDITFLCVLT 328
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 134/268 (50%), Gaps = 26/268 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ V KN V SWN++IA AR G +A FS+M + ++ PT T+ + +C+++
Sbjct: 175 IFDVMVSKNEV-SWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMG 233
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H +G FV + L+DMY+K G + DA+K+FD + + R++VSW SM
Sbjct: 234 SLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAK--RDVVSWNSM 291
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
LTGY Q+ + AL F+E L + + + VL+ACS + +
Sbjct: 292 LTGYSQHGLGKVALQRFEEML------------RTRIAPNDITFLCVLTACSHAGL--LD 337
Query: 208 EGAHGFVIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIY 264
EG H F + + ++ E + + T++D R GH+D + + M I+ A W +++
Sbjct: 338 EGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGAC 397
Query: 265 AQN------GLAAEALDVFDQMVKSTDV 286
+ G AAE + D T V
Sbjct: 398 RMHKNMELGGYAAECIFELDSHYPGTHV 425
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/659 (38%), Positives = 370/659 (56%), Gaps = 69/659 (10%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SWN+VI ++ GD ALR F M K + P +T+ I S L G++ H +
Sbjct: 175 SWNAVILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEI 233
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
GF D+ V++ALI+MY KCG +AR++FD++ +R ++VSW M+ YVQN + E
Sbjct: 234 VANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKR--DMVSWNVMIGCYVQNGDFHE 291
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
AL L+++ +E + + FV S+L ACS V H +++RG
Sbjct: 292 ALELYQKLDME------GFKRTKATFV------SILGACSSVKALAQGRLVHSHILERGL 339
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT----------------------- 256
DSEV V L++ YA+ G ++ +RKVF+ M +DAV
Sbjct: 340 DSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKV 399
Query: 257 -----------WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
WN++I Y QNG A A+ +F +M + +K +AVT AVL A A LG
Sbjct: 400 FDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGR 459
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L K +H Q+ + +LE +V+V ++I+MY +CG ++ A + F KEK V SWTAM+A
Sbjct: 460 LSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAA 519
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
+ + R EALDLF +M GV+P+ +T+ S+L C+H G +++GW + M + P
Sbjct: 520 FSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAP 579
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
+H+ MVDLLGR+G+L +A +L+E M + D V W + L ACRIH ++LGE AA+++
Sbjct: 580 TADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERV 639
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
+EL+P++ ++ +SNIYA G WE V R M+ R L K PG S +E+ GK+H F G
Sbjct: 640 YELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSG 699
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
K HP+ ++I E L L+ ++ GYV D +V+HDV + EKE L HSEK+A
Sbjct: 700 GKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLV 759
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF-KDGLCSCGDYW 644
NLRVC DCHT + I+++ R+I++RD RFH F DG CSCGDYW
Sbjct: 760 SSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 208/398 (52%), Gaps = 19/398 (4%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P TF + SCS+ D+ G+ H++ F RD V +ALI MY KC L DAR +
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F+ + R RN+VSW +M+ Y QN ++ EAL+L+ N + D V
Sbjct: 65 FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRM------------NLQGLGTDHVT 112
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
SVL ACS + H V G DS + N L+ YAR G V ++++F +
Sbjct: 113 FVSVLGACSSLAQG---REIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQ 169
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+D +WN++I ++Q+G + AL +F +M D+K N+ T V+ + VL G+
Sbjct: 170 TRDETSWNAVILAHSQSGDWSGALRIFKEM--KCDMKPNSTTYINVISGFSTPEVLPEGR 227
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
IH +++ + ++V T++I+MY KCG AR+ F++MK++++ SW MI Y +
Sbjct: 228 KIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNG 287
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
EAL+L+ K+ G + TFVS+L ACS + +G +++ E ++ V
Sbjct: 288 DFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVA 346
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+V++ + G L+EA + MK + D V W +L+GA
Sbjct: 347 TALVNMYAKCGSLEEARKVFNAMKNR-DAVAWSTLIGA 383
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 230/469 (49%), Gaps = 56/469 (11%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ NV SWN++IA A+ G S EAL + M L TF + +CS+L G++
Sbjct: 72 QRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GRE 128
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H + F G +++AL+ MY++ G + DA+++F + + R+ SW +++ + Q+
Sbjct: 129 IHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSL--QTRDETSWNAVILAHSQS 186
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+ AL +FKE +C ++ +S +V+S S V H +
Sbjct: 187 GDWSGALRIFKEM-----KC--------DMKPNSTTYINVISGFSTPEVLPEGRKIHAEI 233
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+ GFDS++ V LI+ Y + G +R+VFD M ++D V+WN +I Y QNG EAL
Sbjct: 234 VANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEAL 293
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+++ Q + K T ++L A + + L G+ +H +++ L+ V V T++++M
Sbjct: 294 ELY-QKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNM 352
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIA-----GYGMHCR-AREALD----------- 377
Y KCG ++ ARK FN MK ++ +W+ +I GYG R AR+ D
Sbjct: 353 YAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWN 412
Query: 378 -----------------LFYKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
+F +M AG++P+ +TF++VL AC+ G + E L+
Sbjct: 413 AMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE-VKALHAQIS 471
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
E +E V ++++ R G L+EA L K K V W +++ A
Sbjct: 472 ESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKT-VVSWTAMVAA 519
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 191/410 (46%), Gaps = 51/410 (12%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K + K ++ SWN +I + GD EAL + + T++TF + +CS++
Sbjct: 264 VFDK-MKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVK 322
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR---------- 137
L G+ H G +V V++AL++MY+KCG L +ARK+F+ + R
Sbjct: 323 ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIG 382
Query: 138 ----------------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG 175
R+ + W +M+T YVQN A A+ +F+E
Sbjct: 383 AYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMT------- 435
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
GA+ + D+V +VL AC+ + + H + + +S V V NTLI+ YAR
Sbjct: 436 GAA----GLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYAR 491
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
G ++ + ++F EK V+W +++A ++Q G AEALD+F +M VK + VT ++
Sbjct: 492 CGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEM-DLEGVKPDDVTYTS 550
Query: 296 VLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-E 353
+L H G L G + D L + +++D+ + G++ A++ M E
Sbjct: 551 ILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFE 610
Query: 354 KNVRSWTAMIAGYGMHCR---AREALDLFYKMIKAGVRPNYITFVSVLSA 400
+ +W + +H + A + Y++ + P YI ++ +A
Sbjct: 611 PDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP-YIAMSNIYAA 659
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/623 (40%), Positives = 373/623 (59%), Gaps = 34/623 (5%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKL-SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
+N ++ L G +AL F M + S+ P + T CA+KSCS + L G+ A
Sbjct: 86 YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G D FV S+LI MY+ C +++ A+ LFD + + +V W +++T Y++N N E
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEEN--GVVMWNAIITAYMKNGNWME 203
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
+ +FK L E G V D + + SV++AC R+ + + +V ++G
Sbjct: 204 VVEMFKGML----EVG--------VAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGL 251
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+ LID YA+ G + +R++FDGM +D V W+++I+ Y Q EAL +F +
Sbjct: 252 VRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSE 311
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M + +V+ N VT+ +VL A A LG L GK +H + + L ++I+GT+++D Y KCG
Sbjct: 312 M-QLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCG 370
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+D A +AF M KN +WTA+I G + R REAL+LF M KA + P +TF+ VL
Sbjct: 371 CIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLM 430
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
ACSH+ LV+EG ++M ++ I+P EHYGC+VDLLGRAG + EAY I M ++ +
Sbjct: 431 ACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNA 490
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
V+W +LL +C +HKNV++GE A K++ L P++ G ++LLSNIYA+ G+W++ R M
Sbjct: 491 VIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEM 550
Query: 520 KNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVI 579
K+R + KTPG SL+EL G V F D +HPQ ++IY+ +EE+ +++ GY+ + V
Sbjct: 551 KDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVR 610
Query: 580 HDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDRE 621
+VD+ EKE+++ HSEKLA NLRVC DCH+ +LISKV +RE
Sbjct: 611 LEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNRE 670
Query: 622 IVVRDSKRFHYFKDGLCSCGDYW 644
IVVRD RFH+FKDG CSC DYW
Sbjct: 671 IVVRDRNRFHHFKDGTCSCNDYW 693
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 176/348 (50%), Gaps = 26/348 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ V++N V WN++I + G+ +E + F M ++ + T + +C +
Sbjct: 176 LFDA-VEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIG 234
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D GK + G R+ + +ALIDMY+KCGEL AR+LFD + + R++V+W++M
Sbjct: 235 DAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGM--QSRDVVAWSAM 292
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY Q D REAL LF E L E E + V + SVLSAC+ +
Sbjct: 293 ISGYTQADQCREALALFSEMQLAEVE------------PNDVTMVSVLSACAVLGALETG 340
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H ++ ++ + +G L+D YA+ G +D + + F+ M K++ TW ++I A N
Sbjct: 341 KWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATN 400
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK-----CIHDQVIKMDLE 322
G EAL++F M K++ ++ VT VL+A +H ++ G+ D IK E
Sbjct: 401 GRGREALELFSSMRKAS-IEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAE 459
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + G +D A + M E N W A+++ +H
Sbjct: 460 HY----GCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVH 503
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/637 (37%), Positives = 384/637 (60%), Gaps = 35/637 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+TL +++ +WN+++A +RG EALR F ++ + P +TF A+ +C+
Sbjct: 57 STLATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRALPPAA-RPDSTTFTLALSACAR 115
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L DL +G+ +A G+ D+FV S+++++Y+KCG + DA K+FD + R R+ V+W+
Sbjct: 116 LGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRM--RKRDRVTWS 173
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M+TG+V +A+ ++ D + D V I V+ AC+
Sbjct: 174 TMVTGFVNAGQPVQAIEMYMRM------------RRDGLEADEVVIVGVMQACAATGDAR 221
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ HG++++ +V + +L+D YA+ G D +R+VF+ M ++ V+W+++I+ A
Sbjct: 222 MGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLA 281
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q G A EAL +F +M++ + + N+ + LLA + LG+L+LGK IH +++ LE
Sbjct: 282 QYGNADEALGLF-RMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDR 339
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+VGT++IDMY KCG + A+ F+++ +++ SW MIA G H R R+AL LF +M +
Sbjct: 340 MVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRN 399
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
VRP++ TF S+LSA SH+GLV+EG W N M +E+ IEPG +H C+VDLL R+G ++E
Sbjct: 400 EVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEE 459
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A L+ + K + +LL C + ++LGE A+K+ EL+P + G L+SN+YA
Sbjct: 460 ANGLVASLHSKPTISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAA 519
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
A W V R LMK+ K PG S +E+RG +H F++ D+ HPQH +I + + +L+ +
Sbjct: 520 AKNWYKVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSE 579
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++++GY+ V HD+++ KE L HSE+LA NLRVCGDC
Sbjct: 580 MRKMGYIPKTEFVYHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDC 639
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H I+ +SK+ DREIVVRD+KRFH+FKDG CSCGDYW
Sbjct: 640 HDAIKYMSKIADREIVVRDAKRFHHFKDGACSCGDYW 676
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 195/402 (48%), Gaps = 31/402 (7%)
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL 168
+SS L Y++ G+L+ A P +I +W ++L + + + EAL +F+
Sbjct: 37 ILSSCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRAL- 95
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRV----TVNGVTEGAHGFVIKRGFDSEVG 224
DS LSAC+R+ T VT+ A G G+ +++
Sbjct: 96 ------------PPAARPDSTTFTLALSACARLGDLATGEVVTDRASG----AGYGNDIF 139
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
V +++++ YA+ G +D + KVFD M ++D VTW++++ + G +A++++ +M +
Sbjct: 140 VCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRM-RRD 198
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
++ + V + V+ A A G R+G +H +++ ++ V++ TS++DMY K G D A
Sbjct: 199 GLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQA 258
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R+ F M +N SW+A+I+ + A EAL LF M +G+ PN V L ACS
Sbjct: 259 RRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDL 318
Query: 405 GLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW 462
GL++ G H E + G ++D+ + G L A L + + V D + W
Sbjct: 319 GLLKLGKSIHGFILRTLELDRMVGT----AVIDMYSKCGSLSSAQMLFDKV-VSRDLISW 373
Query: 463 GSLLGACRIH-KNVD-LGEIAAKKLFELEPNNCGYHVLLSNI 502
++ C H + D L K E+ P++ + LLS +
Sbjct: 374 NVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSAL 415
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/665 (37%), Positives = 375/665 (56%), Gaps = 63/665 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++N V SW S+I A+ G EA+ F M ++ + P T I +C+ L
Sbjct: 196 VFDKMSERN-VVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQ 254
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL G+Q + + +AL+DMY KCG + ARK+FDE + N+V + ++
Sbjct: 255 DLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDK--NLVLYNTI 312
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ YV+ ARE L + E L D + + S +SACS +
Sbjct: 313 MSNYVRQGLAREVLAVLGEMLKHGPR------------PDRITMLSAVSACSELDDVSCG 360
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG+V++ G + V N +I+ Y + G +++ +VFD M+ K V+WNS+IA + +N
Sbjct: 361 KWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRN 420
Query: 268 GLAAEALDVFDQM------------------------------VKSTDVKCNAVTLSAVL 297
G A +F M ++S + + VT+ V
Sbjct: 421 GDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVA 480
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A +LG L L K IH + K D+ + +GT+++DM+ +CG A + FN+M +++V
Sbjct: 481 SACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVS 540
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
+WTA I M A++LF +M++ G++P+ + FV++L+A SH GLV++GWH +M
Sbjct: 541 AWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSM 600
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
+ I P HYGCMVDLLGRAG L EA LI M+++ + V+WGSLL ACR+HKNVD+
Sbjct: 601 KDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDI 660
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG 537
AA+++ EL+P G HVLLSNIYA+AGRW+DV + R +K + K PG S +E+ G
Sbjct: 661 AAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEING 720
Query: 538 KVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
K+ F GD+ HP+ I L+E+ +L+++GYV D+T+V+ DV+++EKE L HSEK
Sbjct: 721 KIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEK 780
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA NLR+C DCH+ +L+SK REI+VRD+ RFH+F+ G CS
Sbjct: 781 LAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCS 840
Query: 640 CGDYW 644
CGDYW
Sbjct: 841 CGDYW 845
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 230/478 (48%), Gaps = 52/478 (10%)
Query: 32 YVDKNNVFSWNSVIADLARG----GDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+++ N + + + + L RG G +A+ F + + P TFP + +C+
Sbjct: 94 FIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSA 153
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G Q H GF RD+FV ++LI Y +CGE+ R++FD++ + RN+VSWTS+
Sbjct: 154 ALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSE--RNVVSWTSL 211
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + +EA+ LF E + E G + +SV + V+SAC+++ +
Sbjct: 212 IGGYAKRGCYKEAVSLFFEMV----EVG--------IRPNSVTMVGVISACAKLQDLQLG 259
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
E + + + + N L+D Y + G +D +RK+FD ++K+ V +N+I++ Y +
Sbjct: 260 EQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQ 319
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GLA E L V +M+K + + +T+ + + A + L + GK H V++ LE V
Sbjct: 320 GLAREVLAVLGEMLKHGP-RPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNV 378
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY--------------------- 366
+II+MY KCG+ ++A + F++M K SW ++IAG+
Sbjct: 379 CNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDL 438
Query: 367 ----------GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+EA++LF M G+ + +T V V SAC + G + W++
Sbjct: 439 VSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLA-KWIHG 497
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
+ +I + +VD+ R G + A + M VK D W + +GA + N
Sbjct: 498 YIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGN 554
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 225/439 (51%), Gaps = 46/439 (10%)
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL---- 124
LT RS+ + K C + +L KQ H Q G + +L ++ S C E+
Sbjct: 29 LTKHRSSPTGSFKKCKTMTEL---KQLHSQITKNGLNHHPL---SLTNLISSCTEMGTFE 82
Query: 125 -----SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
A +LF E + ++S++ G+ +A+++F++ + C GA
Sbjct: 83 SLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLM-----CMGAVP 137
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGG 237
D+ VLSAC++ +TEG HG ++K GF+ ++ V N+LI Y G
Sbjct: 138 -------DNFTFPFVLSACTKSA--ALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECG 188
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
+D R+VFD M E++ V+W S+I YA+ G EA+ +F +MV+ ++ N+VT+ V+
Sbjct: 189 EIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVE-VGIRPNSVTMVGVI 247
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A A L L+LG+ + + +++LE + ++ +++DMY KCG +D ARK F++ +KN+
Sbjct: 248 SACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLV 307
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
+ +++ Y ARE L + +M+K G RP+ IT +S +SACS V G W
Sbjct: 308 LYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCG-KWC--- 363
Query: 418 GHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
H + + G+E + ++++ + GK + A + + M K V W SL+ +
Sbjct: 364 -HGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTR-VSWNSLIAG--FVR 419
Query: 474 NVDLGEIAAKKLFELEPNN 492
N D+ +A K+F P++
Sbjct: 420 NGDME--SAWKIFSAMPDS 436
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/642 (39%), Positives = 379/642 (59%), Gaps = 44/642 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL--SLTPTRSTFPCAIKSCSALHDLH 90
+ ++ +WN+++A A G A+ SM+ L P ST + + L
Sbjct: 186 MPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALA 245
Query: 91 SGKQAHQQAFIFGFHRD----------VFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
G H H + V + +AL+DMY+KCG L AR++FD +P R N
Sbjct: 246 QGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR--N 303
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
V+W++++ G+V +A LLFK +L + C F+ +IAS L AC+
Sbjct: 304 EVTWSALIGGFVLCSRMTQAFLLFKA-MLAQGLC----------FLSPTSIASALRACAS 352
Query: 201 VTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSI 260
+ + E H + K G +++ GN+L+ YA+ G +D + +FD M KD V+++++
Sbjct: 353 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 412
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
++ Y QNG A EA VF +M ++ +V+ +A T+ +++ A +HL L+ G+C H VI
Sbjct: 413 VSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 471
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
L + ++IDMY KCG++DL+R+ FN M +++ SW MIAGYG+H +EA LF
Sbjct: 472 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 531
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+M G P+ +TF+ +LSACSH+GLV EG HW + M H + + P +EHY CMVDLL R
Sbjct: 532 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRG 591
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
G L EAY+ I+ M ++AD VW +LLGACR++KN+DLG+ ++ + EL P G VLLS
Sbjct: 592 GFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLS 651
Query: 501 NIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLE 560
NIY+ AGR+++ R + K + K+PG S +E+ G +HAF+ GD+ HPQ +IY L+
Sbjct: 652 NIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELD 711
Query: 561 ELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLR 602
+ V ++++GY D + V+ D+++EEKE L HSEKLA NLR
Sbjct: 712 NILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLR 771
Query: 603 VCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
VCGDCHTVI+ IS + R I+VRD+ RFH+FK+G CSCGD+W
Sbjct: 772 VCGDCHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 237/486 (48%), Gaps = 44/486 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEA--LRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
LF++ + +V ++N +I + + A L + M + + P TFP A+K+CSA
Sbjct: 79 LFDQ-IPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSA 137
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L D H G+ H+ A G D+FVS+AL+DMY KC L DA +F +P R++V+W
Sbjct: 138 LADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA--RDLVAWN 195
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+ML GY + A+ L + + N+ + VA+ +L+
Sbjct: 196 AMLAGYAHHGMYHHAV---AHLLSMQMQMHRLRPNASTL----VALLPLLA-----QQGA 243
Query: 206 VTEGA--HGFVIKRGFDSE----------VGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+ +G H + I+ S V +G L+D YA+ G + +R+VFD M ++
Sbjct: 244 LAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 303
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
VTW+++I + +A +F M+ + ++++ L A A L LR+G+ +H
Sbjct: 304 EVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLH 363
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+ K + + G S++ MY K G +D A F++M K+ S++A+++GY + RA
Sbjct: 364 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV--EHYG 431
EA +F KM V P+ T VS++ ACSH +Q G H I G+ E
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG-----RCSHGSVIIRGLASETSI 478
Query: 432 C--MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
C ++D+ + G++ + + M + D V W +++ IH LG+ A LF LE
Sbjct: 479 CNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIH---GLGK-EATALF-LE 532
Query: 490 PNNCGY 495
NN G+
Sbjct: 533 MNNLGF 538
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L+ +S+ + + ++ +L+ + ++ SWN++IA G EA F
Sbjct: 472 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 531
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ-AHQQAFIFGFHRDVFVSSALIDMYSKC 121
M L P TF C + +CS + GK H +G + ++D+ S+
Sbjct: 532 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRG 591
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSML 148
G L +A + +P R ++ W ++L
Sbjct: 592 GFLDEAYEFIQSMPLRA-DVRVWVALL 617
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 255/635 (40%), Positives = 366/635 (57%), Gaps = 50/635 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FNK +N++ SWN ++A G EA R F S L ++ C + +
Sbjct: 161 VFNKMPHRNSI-SWNGLLAAYVHNGRLKEARRLFESQSNWELI----SWNCLMGGYVKRN 215
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L +Q + + RDV + +I Y++ G+LS A++LF+E P IR++ +WT+M
Sbjct: 216 MLGDARQLFDRMPV----RDVISWNTMISGYAQVGDLSQAKRLFNESP--IRDVFTWTAM 269
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GYVQN EA F E ++ N + +A + V +
Sbjct: 270 VSGYVQNGMVDEARKYFDEMPVK------------NEISYNAMLAGYVQYKKMVIAGELF 317
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
E + NT+I Y + G + +RK+FD M ++D V+W +II+ YAQN
Sbjct: 318 EAMPC--------RNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQN 369
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EAL++F +M + + N T S L A + L LGK +H QV+K E V
Sbjct: 370 GHYEEALNMFVEMKRDGE-SSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFV 428
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G +++ MY KCG D A F ++EK+V SW MIAGY H R+AL LF M KAGV
Sbjct: 429 GNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGV 488
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+P+ IT V VLSACSH+GL+ G + +M ++N++P +HY CM+DLLGRAG+L+EA
Sbjct: 489 KPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAE 548
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+L+ M WG+LLGA RIH N +LGE AA+ +F++EP N G +VLLSN+YA +G
Sbjct: 549 NLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 608
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RW DV + RS M+ + K G+S VE++ K+H F VGD HP+ ++IY +LEEL++K++
Sbjct: 609 RWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMR 668
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV+ V+HDV++EEKE L+ HSEKLA NLRVC DCH
Sbjct: 669 REGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHN 728
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+ ISK+V R I++RDS RFH+F +G+CSCGDYW
Sbjct: 729 AIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 209/490 (42%), Gaps = 118/490 (24%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ +WN I+ R G ALR F+SM P RS+
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSM------PRRSSVS------------------- 79
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+A+I Y + + S AR LFD++P+R ++ SW MLTGYV+N
Sbjct: 80 --------------YNAMISGYLRNAKFSLARDLFDKMPER--DLFSWNVMLTGYVRNRR 123
Query: 157 AREALLLF-----KEFLLEESECGGASENSDNVFVD-------------SVAIASVLSAC 198
EA LF K+ + + G ++N FVD S++ +L+A
Sbjct: 124 LGEAHKLFDLMPKKDVVSWNAMLSGYAQNG---FVDEAREVFNKMPHRNSISWNGLLAA- 179
Query: 199 SRVTVNGVTEGAH------------------GFVIKRG--------FD----SEVGVGNT 228
NG + A G +KR FD +V NT
Sbjct: 180 --YVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNT 237
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
+I YA+ G + ++++F+ +D TW ++++ Y QNG+ EA FD+M ++
Sbjct: 238 MISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISY 297
Query: 289 NAVTLSAVLLAIAHLGVLRLGK-CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
NA +LA G ++ K I ++ + ++ ++I Y + G + ARK
Sbjct: 298 NA------MLA----GYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKL 347
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F+ M +++ SW A+I+GY + EAL++F +M + G N TF LS C+ +
Sbjct: 348 FDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAAL 407
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVD--LLG---RAGKLKEAYDLIEGMKVKADFVVW 462
+ L H ++ G E GC V LLG + G EA D+ EG++ K D V W
Sbjct: 408 E-----LGKQVHGQVVKAGFET-GCFVGNALLGMYFKCGSTDEANDVFEGIEEK-DVVSW 460
Query: 463 GSLLGACRIH 472
+++ H
Sbjct: 461 NTMIAGYARH 470
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 42/296 (14%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M SS +++++ ++ LF+ ++ V SW ++I+ A+ G EAL
Sbjct: 320 MPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCV-SWAAIISGYAQNGHYEEALNM 378
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F M++ + RSTF CA+ +C+ + L GKQ H Q GF FV +AL+ MY K
Sbjct: 379 FVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFK 438
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG +A +F+ I + +++VSW +M+ GY ++ R+AL+LF+ S
Sbjct: 439 CGSTDEANDVFEGIEE--KDVVSWNTMIAGYARHGFGRQALVLFE------------SMK 484
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG------FDSEVGVGNT------ 228
V D + + VLSACS H +I RG D + V T
Sbjct: 485 KAGVKPDEITMVGVLSACS-----------HSGLIDRGTEYFYSMDRDYNVKPTSKHYTC 533
Query: 229 LIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA---IYAQNGLAAEALDVFDQM 280
+ID R G ++ + + M + A +W +++ I+ L +A ++ +M
Sbjct: 534 MIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKM 589
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 137/286 (47%), Gaps = 24/286 (8%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N ++ Y R + + K+FD M +KD V+WN++++ YAQNG EA +VF++M
Sbjct: 112 NVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR--- 168
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
N+++ + +L A H G L+ + + + +L I ++ Y K + AR+
Sbjct: 169 --NSISWNGLLAAYVHNGRLKEARRLFESQSNWEL----ISWNCLMGGYVKRNMLGDARQ 222
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F++M ++V SW MI+GY +A LF ++ +R + T+ +++S G+
Sbjct: 223 LFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFN---ESPIR-DVFTWTAMVSGYVQNGM 278
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V E + + M + I Y M+ + K+ A +L E M + + W +++
Sbjct: 279 VDEARKYFDEMPVKNEIS-----YNAMLAGYVQYKKMVIAGELFEAMPCR-NISSWNTMI 332
Query: 467 GACRIHKNVDLGEIAAKKLFELEPN-NCGYHVLLSNIYANAGRWED 511
+ G A+KLF++ P +C + + YA G +E+
Sbjct: 333 TG----YGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEE 374
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 129/285 (45%), Gaps = 29/285 (10%)
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
D ++ N I ++ R GH D + +VF+ M + +V++N++I+ Y +N + A D+FD+
Sbjct: 43 DPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDK 102
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M + N ++ ++ RLG+ ++ + ++ V+ +++ Y + G
Sbjct: 103 MPERDLFSWN-------VMLTGYVRNRRLGEA--HKLFDLMPKKDVVSWNAMLSGYAQNG 153
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
VD AR+ FN+M +N SW ++A Y + R +EA LF + + +
Sbjct: 154 FVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLF---------ESQSNWELISW 204
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEP--GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
C G V+ + L F+ P V + M+ + G L +A L ++
Sbjct: 205 NCLMGGYVKR--NMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIR- 261
Query: 458 DFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP--NNCGYHVLLS 500
D W +++ + VD A+K F+ P N Y+ +L+
Sbjct: 262 DVFTWTAMVSGYVQNGMVD----EARKYFDEMPVKNEISYNAMLA 302
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 255/636 (40%), Positives = 365/636 (57%), Gaps = 37/636 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ D++ V SWN++I LA+ G EA F M++ P +T+ + + +
Sbjct: 291 VFDGMCDRD-VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTG 349
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
K+ H+ A G D+ V SA + MY +CG + DA+ +FD++ +RN+ +W +M
Sbjct: 350 AWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLA--VRNVTTWNAM 407
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA-CSRVTVNGV 206
+ G Q REAL LF + E F D+ ++LSA + V
Sbjct: 408 IGGVAQQKCGREALSLFLQMRRE------------GFFPDATTFVNILSANVGEEALEWV 455
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
E H + I G ++ VGN L+ YA+ G+ +++VFD M+E++ TW +I+ AQ
Sbjct: 456 KE-VHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQ 513
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
+G EA +F QM++ V +A T ++L A A G L K +H + L +
Sbjct: 514 HGCGHEAFSLFLQMLREGIVP-DATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLR 572
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
VG +++ MY KCG VD AR+ F+ M E++V SWT MI G H R +ALDLF KM G
Sbjct: 573 VGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEG 632
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+PN +FV+VLSACSHAGLV EG ++ ++ IEP +EHY CMVDLLGRAG+L+EA
Sbjct: 633 FKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEA 692
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
I M ++ WG+LLGAC + N+++ E AAK+ +L+P + +VLLSNIYA
Sbjct: 693 KHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAAT 752
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
G WE RS+M+ R + K PG S +E+ ++H+F+VGD HP+ ++IY L++L +L
Sbjct: 753 GNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRL 812
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+ GYV D V+ + DQE KE L HSEKLA NLRVC DCH
Sbjct: 813 KAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCH 872
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
T + ISKV REIV RD+KRFH+FKDG+CSCGDYW
Sbjct: 873 TATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 208/403 (51%), Gaps = 25/403 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K V++N V SW +I LA G EA F M++ P T+ + + ++
Sbjct: 87 IFDKMVERN-VISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAG 145
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L K+ H A G D+ V +AL+ MY+K G + DAR +FD + + R+I SWT M
Sbjct: 146 ALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVE--RDIFSWTVM 203
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G Q+ +EA LF + E GG N S+L+A S +T G
Sbjct: 204 IGGLAQHGRGQEAFSLFLQM-----ERGGCLPNLTTYL-------SILNA-SAITSTGAL 250
Query: 208 EG---AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
E H K GF S++ VGN LI YA+ G +D +R VFDGM ++D ++WN++I
Sbjct: 251 EWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGL 310
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
AQNG EA +F +M + V ++ T ++L G K +H +++ L
Sbjct: 311 AQNGCGHEAFTIFLKMQQEGFVP-DSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSD 369
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+ VG++ + MY +CG +D A+ F+++ +NV +W AMI G REAL LF +M +
Sbjct: 370 LRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRR 429
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
G P+ TFV++LS A + +E W+ + H + I+ G+
Sbjct: 430 EGFFPDATTFVNILS----ANVGEEALEWVKEV-HSYAIDAGL 467
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 211/436 (48%), Gaps = 27/436 (6%)
Query: 44 VIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFG 103
+I A G + +A++ +S MR+ P T+ +K+C + L GK+ H G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 104 FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
F DV V +AL++MY KCG + DA+ +FD++ + RN++SWT M+ G +EA
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVE--RNVISWTVMIGGLAHYGRGQEA--- 115
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEV 223
F FL + E +S S+L+A + + H + G ++
Sbjct: 116 FHRFLQMQRE---------GFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDL 166
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
VGN L+ YA+ G +D +R VFDGM+E+D +W +I AQ+G EA +F QM +
Sbjct: 167 RVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERG 226
Query: 284 TDVKCNAVTLSAVL--LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ N T ++L AI G L K +H K + VG ++I MY KCG +
Sbjct: 227 GCLP-NLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSI 285
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
D AR F+ M +++V SW AMI G + EA +F KM + G P+ T++S+L+
Sbjct: 286 DDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTH 345
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
G W W+ + H+ +E G + V + R G + +A + + + V+
Sbjct: 346 VSTG----AWEWVKEV-HKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR- 399
Query: 458 DFVVWGSLLGACRIHK 473
+ W +++G K
Sbjct: 400 NVTTWNAMIGGVAQQK 415
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 181/378 (47%), Gaps = 34/378 (8%)
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ GY + A +A+ ++ + E GG + + S+L AC
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRRE----GGQP--------NEITYLSILKACCSPVSLKW 48
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H +I+ GF S+V V L++ Y + G +D ++ +FD M+E++ ++W +I A
Sbjct: 49 GKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAH 108
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
G EA F QM + + N+ T ++L A A G L K +H + L +
Sbjct: 109 YGRGQEAFHRFLQMQREGFIP-NSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLR 167
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
VG +++ MY K G +D AR F+ M E+++ SWT MI G H R +EA LF +M + G
Sbjct: 168 VGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGG 227
Query: 387 VRPNYITFVSVL--SACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRA 440
PN T++S+L SA + G ++ W+ + H+ + G + ++ + +
Sbjct: 228 CLPNLTTYLSILNASAITSTGALE----WVKEV-HKHAGKAGFISDLRVGNALIHMYAKC 282
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE-----PNNCGY 495
G + +A + +GM D + W +++G + +N G A +++ P++ Y
Sbjct: 283 GSIDDARLVFDGM-CDRDVISWNAMIGG--LAQN-GCGHEAFTIFLKMQQEGFVPDSTTY 338
Query: 496 HVLLSNIYANAGRWEDVE 513
LL N + + G WE V+
Sbjct: 339 LSLL-NTHVSTGAWEWVK 355
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 268/661 (40%), Positives = 381/661 (57%), Gaps = 55/661 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRK-LSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
++ SWNS++A +GGDS+ A++ F M + L + P + + +C+++ GKQ
Sbjct: 213 DLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQV 272
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H A G DVFV +A++DMY+KCG + +A K+F+ + +++++VSW +M+TGY Q
Sbjct: 273 HGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERM--KVKDVVSWNAMVTGYSQIG 330
Query: 156 NAREALLLFKEFLLEESECG--------------GASENSDNVF---------VDSVAIA 192
+AL LF++ E+ E G + +VF + V +
Sbjct: 331 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLV 390
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFD-------SEVGVGNTLIDAYARGGHVDVSRKV 245
S+LS C+ + H IK + ++ V N LID Y++ +R +
Sbjct: 391 SLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 450
Query: 246 FDGMIEKD--AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD-VKCNAVTLSAVLLAIAH 302
FD + KD VTW +I AQ+G A EAL++F QM++ + V NA T+S L+A A
Sbjct: 451 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 510
Query: 303 LGVLRLGKCIHDQVIKMDLEESVI-VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
LG LR G+ IH V++ E +++ V +IDMY K G VD AR F+ M ++N SWT+
Sbjct: 511 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 570
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
++ GYGMH R EAL +FY+M K + P+ +TFV VL ACSH+G+V +G ++ N M +F
Sbjct: 571 LMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 630
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
+ PG EHY CMVDLL RAG+L EA +LI GM +K VW +LL ACR++ NV+LGE A
Sbjct: 631 GVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYA 690
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
A +L ELE N G + LLSNIYANA W+DV R R LMKN + K PG S V+ R
Sbjct: 691 ANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTAT 750
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
F GD HP ++IY+ L +L +++ +GYV D +HDVD EEK L HSEKLA
Sbjct: 751 FFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALA 810
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
NLR CGDCH+ IS +++ EI+VRDS RFH+FK+G CSC Y
Sbjct: 811 YGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGY 870
Query: 644 W 644
W
Sbjct: 871 W 871
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 253/523 (48%), Gaps = 73/523 (13%)
Query: 19 HSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC 78
+S L+ L + + VF WN +I G + L+ + M++L P TFP
Sbjct: 91 NSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPF 150
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR- 137
+K+C + G H F GF +VFV + L+ MY +CG +AR++FDE+ +R
Sbjct: 151 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG 210
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ ++VSW S++ Y+Q ++ A+ +F E + E+ + D+V++ +VL A
Sbjct: 211 VGDLVSWNSIVAAYMQGGDSIRAMKMF-ERMTEDL----------GIRPDAVSLVNVLPA 259
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-------- 249
C+ V + HG+ ++ G +V VGN ++D YA+ G ++ + KVF+ M
Sbjct: 260 CASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSW 319
Query: 250 ---------------------------IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
IE + VTW+++IA YAQ GL EALDVF QM+
Sbjct: 320 NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLL 379
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK--MDLEES-----VIVGTSIIDMY 335
+ N VTL ++L A G L GK H IK ++L+E+ ++V ++IDMY
Sbjct: 380 CGS-EPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMY 438
Query: 336 CKCGQVDLARKAFNQM--KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG--VRPNY 391
KC AR F+ + K+++V +WT +I G H A EAL+LF +M++ V PN
Sbjct: 439 SKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNA 498
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH-----YGCMVDLLGRAGKLKEA 446
T L AC+ G ++ G H + + E C++D+ ++G + A
Sbjct: 499 FTISCALMACARLGALRFG-----RQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAA 553
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
+ + M + + V W SL+ +H GE A + +E++
Sbjct: 554 RVVFDNMHQR-NGVSWTSLMTGYGMHGR---GEEALQIFYEMQ 592
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 191/395 (48%), Gaps = 36/395 (9%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKN---NVFSWNSVIADLARGGDSVEA 57
MK+ S +++V+ + + LF K ++ NV +W++VIA A+ G EA
Sbjct: 311 MKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEA 370
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFH-------RDVFV 110
L F M P T + C++ L GK+ H A + + D+ V
Sbjct: 371 LDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMV 430
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+ALIDMYSKC AR +FD IP + R++V+WT ++ G Q+ A EAL LF + L
Sbjct: 431 INALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQML-- 488
Query: 171 ESECGGASENSDN-VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE-VGVGNT 228
DN V ++ I+ L AC+R+ H +V++ F+S + V N
Sbjct: 489 ---------QPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANC 539
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
LID Y++ G VD +R VFD M +++ V+W S++ Y +G EAL +F +M K V
Sbjct: 540 LIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVP- 598
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS----IIDMYCKCGQVDLA 344
+ VT VL A +H G++ G + M+ + V+ G ++D+ + G++D A
Sbjct: 599 DGVTFVVVLYACSHSGMVDQGINYFN---GMNKDFGVVPGAEHYACMVDLLSRAGRLDEA 655
Query: 345 RKAFNQMKEKNVRS-WTAMIAGYGMHCRAREALDL 378
+ M K + W A+++ CR ++L
Sbjct: 656 MELIRGMPMKPTPAVWVALLSA----CRVYANVEL 686
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 197/454 (43%), Gaps = 72/454 (15%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L S + HQQ + G D + +I MY + A + + + W ++
Sbjct: 61 LASAELTHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLI 117
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
V + L L++ G ++ FV L AC +
Sbjct: 118 RRSVHLGFLEDVLQLYRRM----QRLGWRPDHYTFPFV--------LKACGEIPSFRCGA 165
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK---DAVTWNSIIAIYA 265
H V GF+ V VGN L+ Y R G + +R+VFD M E+ D V+WNSI+A Y
Sbjct: 166 SVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYM 225
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q G + A+ +F++M + ++ +AV+L VL A A +G GK +H ++ L E V
Sbjct: 226 QGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV 285
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY----------GMHCRAR-- 373
VG +++DMY KCG ++ A K F +MK K+V SW AM+ GY G+ + R
Sbjct: 286 FVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREE 345
Query: 374 -----------------------EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
EALD+F +M+ G PN +T VS+LS C+ AG + G
Sbjct: 346 KIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHG 405
Query: 411 -------WHWLNTMGHEFNIEPG--VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
W+ + +PG + ++D+ + K A + + + K VV
Sbjct: 406 KETHCHAIKWILNLDEN---DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVV 462
Query: 462 -WGSLLGACRIHKNVDLGEIAAKKLFE--LEPNN 492
W L+G H + A +LF L+P+N
Sbjct: 463 TWTVLIGGNAQHGEAN----EALELFSQMLQPDN 492
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/575 (43%), Positives = 349/575 (60%), Gaps = 33/575 (5%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L +Q H QA + G +++ V++ L+ YS L DA LFD + +R+ VSW+ M
Sbjct: 750 NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMC--VRDSVSWSVM 807
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + + F+E + CG +N FV + AC + +
Sbjct: 808 VGGFAKVGDYMNCFGTFRELI----RCGARPDNYTLPFV--------IRACRDLKNLQMG 855
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H V K G D + V L+D Y + ++ +R +FD M E+D VTW +I YA+
Sbjct: 856 RLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAEC 915
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A E+L +FD+M + V + V + V+ A A LG + + I D + + + VI+
Sbjct: 916 GNANESLVLFDKM-REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVIL 974
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
GT++IDM+ KCG V+ AR+ F++M+EKNV SW+AMIA YG H + R+ALDLF M+++G+
Sbjct: 975 GTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGI 1034
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
PN IT VS+L ACSHAGLV+EG + + M ++++ V+HY C+VDLLGRAG+L EA
Sbjct: 1035 LPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEAL 1094
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
LI M + D +WG+ LGACR HK+V L E AA L EL+P N G+++LLSNIYANAG
Sbjct: 1095 KLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAG 1154
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RWEDV + R LM RRL K PG++ +E+ K H F VGD HP+ ++IYE L+ L KL+
Sbjct: 1155 RWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLE 1214
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
VGYV D V+HDVD+E K L HSEKLA NLRVCGDCHT
Sbjct: 1215 LVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHT 1274
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+L+S + R I+VRD+ RFH+FK+G CSCGDYW
Sbjct: 1275 FCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 1309
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/537 (41%), Positives = 325/537 (60%), Gaps = 17/537 (3%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L +Q H QA + G ++ V++ LI YS L DA LFD + +R+ VSW+ M
Sbjct: 74 NLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC--VRDSVSWSVM 131
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + + F+E + CG +N FV + AC + +
Sbjct: 132 VGGFAKVGDYINCFGTFRELI----RCGARPDNYTLPFV--------IRACRDLKNLQMG 179
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H V K G D + V L+D Y + ++ +R +FD M E+D VTW +I YA+
Sbjct: 180 RLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAEC 239
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A E+L +F++M + V + V + V+ A A LG + + I D + + + VI+
Sbjct: 240 GKANESLVLFEKM-REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVIL 298
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
GT++IDMY KCG V+ AR+ F++M+EKNV SW+AMIA YG H + R+ALDLF M+ +G+
Sbjct: 299 GTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGM 358
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ IT S+L ACSHAGLV+EG + ++M ++++ V+HY C+VDLLGRAG+L EA
Sbjct: 359 LPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEAL 418
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
LI+ M ++ D +WG+ LGACR HK+V L E AA L EL+ N G++VLLSNIYANAG
Sbjct: 419 KLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAG 478
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RWEDV + R LM RRL KTPG++ +E+ K H F VGD HP+ ++IYE L+ L+ KL+
Sbjct: 479 RWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLE 538
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLANL--RVCGDCHTVIRLISKVVDREI 622
VGYV D V+HDVD+E K L HSEKLA + HT IR+I + ++++
Sbjct: 539 LVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLREKKL 595
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 184/348 (52%), Gaps = 26/348 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +++V SW+ ++ A+ GD + F + + P T P I++C L
Sbjct: 792 LFDGMCVRDSV-SWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLK 850
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L G+ H + FG D FV +AL+DMY KC E+ DAR LFD++ + R++V+WT M
Sbjct: 851 NLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXE--RDLVTWTVM 908
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + NA E+L+LF + + V D VA+ +V+ AC+++
Sbjct: 909 IGGYAECGNANESLVLFDKM------------REEGVVPDKVAMVTVVFACAKLGAMHKA 956
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
++ ++ F +V +G +ID +A+ G V+ +R++FD M EK+ ++W+++IA Y +
Sbjct: 957 RTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH 1016
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-----KCIHDQVIKMDLE 322
G +ALD+F M++S + N +TL ++L A +H G++ G D ++ D++
Sbjct: 1017 GQGRKALDLFPMMLRS-GILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVK 1075
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
T ++D+ + G++D A K M EK+ W A + H
Sbjct: 1076 HY----TCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTH 1119
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 185/348 (53%), Gaps = 26/348 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +++V SW+ ++ A+ GD + F + + P T P I++C L
Sbjct: 116 LFDGMCVRDSV-SWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLK 174
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L G+ H + FG D FV +AL+DMY KC E+ DAR LFD++ + R++V+WT M
Sbjct: 175 NLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQE--RDLVTWTVM 232
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + A E+L+LF++ + V D VA+ +V+ AC+++
Sbjct: 233 IGGYAECGKANESLVLFEKM------------REEGVVPDKVAMVTVVFACAKLGAMHKA 280
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
++ ++ F +V +G +ID YA+ G V+ +R++FD M EK+ ++W+++IA Y +
Sbjct: 281 RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH 340
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-----KCIHDQVIKMDLE 322
G +ALD+F M+ S+ + + +TL+++L A +H G++ G D ++ D++
Sbjct: 341 GQGRKALDLFPMML-SSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVK 399
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
T ++D+ + G++D A K M EK+ W A + H
Sbjct: 400 HY----TCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTH 443
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 255/662 (38%), Positives = 391/662 (59%), Gaps = 38/662 (5%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L K+ VS+ + N+ N + + +V +WNS+I+ A G +EAL F
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
SMR + + S+F IK C+ L +L +Q H +GF D + +AL+ YSKC
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+ DA +LF EI + N+VSWT+M++G++QND EA+ LF E + G N
Sbjct: 345 AMLDALRLFKEIGC-VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK-----GVRPNE- 397
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
F SV +L+A ++ + V H V+K ++ VG L+DAY + G V+ +
Sbjct: 398 --FTYSV----ILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL-LAIA 301
KVF G+ +KD V W++++A YAQ G A+ +F ++ K +K N T S++L + A
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG-GIKPNEFTFSSILNVCAA 506
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+ GK H IK L+ S+ V ++++ MY K G ++ A + F + +EK++ SW +
Sbjct: 507 TNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNS 566
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MI+GY H +A +ALD+F +M K V+ + +TF+ V +AC+HAGLV+EG + + M +
Sbjct: 567 MISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 626
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
I P EH CMVDL RAG+L++A +IE M A +W ++L ACR+HK +LG +A
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLA 686
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
A+K+ ++P + +VLLSN+YA +G W++ + R LM R + K PG+S +E++ K ++
Sbjct: 687 AEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYS 746
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
FL GD+ HP ++IY LE+L+ +L+++GY D + V+ D+D E KE L HSE+LA
Sbjct: 747 FLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIA 806
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF-KDGLCSCGD 642
NLRVCGDCH VI+LI+K+ +REIVVRDS RFH+F DG+CSCGD
Sbjct: 807 FGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGD 866
Query: 643 YW 644
+W
Sbjct: 867 FW 868
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 241/490 (49%), Gaps = 45/490 (9%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N LF+K ++ S+ S++ +R G + EA R F ++ +L + S F +K
Sbjct: 45 NAHNLFDKSPGRDRE-SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVS 103
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ L D G+Q H Q FGF DV V ++L+D Y K D RK+FDE+ + RN+V+
Sbjct: 104 ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE--RNVVT 161
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
WT++++GY +N E L LF E ++ +S A+ L + V
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQ------------PNSFTFAAALGVLAEEGV 209
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
G H V+K G D + V N+LI+ Y + G+V +R +FD K VTWNS+I+
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YA NGL EAL +F M + V+ + + ++V+ A+L LR + +H V+K
Sbjct: 270 YAANGLDLEALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ T+++ Y KC + A + F ++ NV SWTAMI+G+ + EA+DLF +M
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 383 IKAGVRPNYITFVSVLSACS-------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
+ GVRPN T+ +L+A HA +V+ + +T+G ++D
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGT------------ALLD 436
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL-----EP 490
+ GK++EA + G+ K D V W ++L + E A K EL +P
Sbjct: 437 AYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAG---YAQTGETEAAIKMFGELTKGGIKP 492
Query: 491 NNCGYHVLLS 500
N + +L+
Sbjct: 493 NEFTFSSILN 502
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 152/282 (53%), Gaps = 19/282 (6%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF--LLEESECGGASENS 181
L +A LFD+ P R R S+ S+L G+ ++ +EA LF L E +C
Sbjct: 43 LYNAHNLFDKSPGRDRE--SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDC------- 93
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
++F +SVL + + H IK GF +V VG +L+D Y +G +
Sbjct: 94 -SIF------SSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD 146
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
RKVFD M E++ VTW ++I+ YA+N + E L +F +M ++ + N+ T +A L +A
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRM-QNEGTQPNSFTFAAALGVLA 205
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
GV G +H V+K L++++ V S+I++Y KCG V AR F++ + K+V +W +
Sbjct: 206 EEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNS 265
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
MI+GY + EAL +FY M VR + +F SV+ C++
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 2 KLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
+L S VSS + + N K + ++ SWNS+I+ A+ G +++AL F
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVF 584
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVS------SALI 115
M+K + TF +C+ H+G + + RD ++ S ++
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACT-----HAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639
Query: 116 DMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
D+YS+ G+L A K+ + +P + + W ++L
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAGSTI-WRTILAA 673
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/660 (38%), Positives = 371/660 (56%), Gaps = 56/660 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
F+ ++ +WN++I+ L +GG EA++ M L + P TF A+ +CS L
Sbjct: 215 FFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLE 274
Query: 88 DLHSGKQAHQQAFIF---GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
L G++ H AF+ + FV+SAL+DMY+ ++S AR++FD +P+ R + W
Sbjct: 275 LLGVGREVH--AFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMW 332
Query: 145 TSMLTGYVQNDNA-REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
+M+ GY Q+ EA+ LF E+E G A + +A VL AC+R V
Sbjct: 333 NAMICGYAQHGGMDEEAIELFSRM---EAEAGCAPSET--------TMAGVLPACARSEV 381
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
E HG+V+KR S V N L+D YAR G +D + +F + +D V+WN++I
Sbjct: 382 FTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITG 441
Query: 264 YAQNGLAAEALDVFDQMVKSTDV-----------------KC--NAVTLSAVLLAIAHLG 304
GL +EA + +M + +C N +TL +L A L
Sbjct: 442 CIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLA 501
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
GK IH ++ LE + VG++++DMY KCG + LAR F+++ +NV +W +I
Sbjct: 502 APARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIM 561
Query: 365 GYGMHCRAREALDLFYKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
YGMH EAL LF +M+ G PN +TF++ L+ACSH+GLV G M ++
Sbjct: 562 AYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGF 621
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV-VWGSLLGACRIHKNVDLGEIAA 482
EP + C+VD+LGRAG+L EAY +I M V W ++LGACR+H+NV LG IAA
Sbjct: 622 EPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAA 681
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
++LFELEP+ ++VLL NIY+ AG WE+ R +M+ R +AK PG S +EL G +H F
Sbjct: 682 ERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRF 741
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
+ G+ HP+ +++ +++ L +++ GYV D + V+HDVD+ EK LR HSEKLA
Sbjct: 742 MAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAF 801
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + IS++V REIV+RD +RFH+F+DG CSCGDYW
Sbjct: 802 GLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 207/417 (49%), Gaps = 46/417 (11%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGF-HRDV-FVSSALIDMYSKCGELSDARKLFD 132
P AIKS +AL D S + H + HR VS+AL+ Y++CG+L A LF
Sbjct: 50 ALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALALFA 109
Query: 133 EIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD----S 188
P +R+ VS+ S+++ AL LF+ + G A + ++ D S
Sbjct: 110 ATPPDLRDAVSYNSLIS----------ALCLFRRW-------GHALDALRDMLADHEVSS 152
Query: 189 VAIASVLSACSRVTVNGVTEG--AHGFVIKRGF---DSEVGVGNTLIDAYARGGHVDVSR 243
+ SVL ACS + G G AH F +K GF E N L+ YAR G VD ++
Sbjct: 153 FTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQ 212
Query: 244 KVF--DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
++F G D VTWN++I++ Q G EA+ V MV + V+ + VT ++ L A +
Sbjct: 213 RLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMV-ALGVRPDGVTFASALPACS 271
Query: 302 HLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE--KNVRS 358
L +L +G+ +H V+K DL + V ++++DMY QV AR+ F+ + E + +
Sbjct: 272 RLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGM 331
Query: 359 WTAMIAGYGMHCRA-REALDLFYKM-IKAGVRPNYITFVSVLSACSHAGLV--QEGWHWL 414
W AMI GY H EA++LF +M +AG P+ T VL AC+ + + +E H
Sbjct: 332 WNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVH-- 389
Query: 415 NTMGHEFNIEPGVEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G+ + + ++D+ R G++ EA+ + + ++ D V W +L+ C
Sbjct: 390 ---GYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLR-DIVSWNTLITGC 442
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 218/474 (45%), Gaps = 56/474 (11%)
Query: 34 DKNNVFSWNSVIADLA---RGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDL- 89
D + S+NS+I+ L R G +++ALR + ++S T + +CS L D
Sbjct: 114 DLRDAVSYNSLISALCLFRRWGHALDALRDMLADHEVS----SFTLVSVLLACSHLADQG 169
Query: 90 -HSGKQAHQQAFIFGF---HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
G++AH A GF R+ F +AL+ MY++ G + DA++LF + ++V+W
Sbjct: 170 HRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWN 229
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M++ VQ EA+ + + + + V D V AS L ACSR+ + G
Sbjct: 230 TMISLLVQGGRCEEAVQVLYDMV------------ALGVRPDGVTFASALPACSRLELLG 277
Query: 206 VTEGAHGFVIKRGFDSEVG----VGNTLIDAYARGGHVDVSRKVFDGMIE--KDAVTWNS 259
V H FV+K D ++ V + L+D YA V +R+VFD + E + WN+
Sbjct: 278 VGREVHAFVLK---DDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNA 334
Query: 260 IIAIYAQN-GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
+I YAQ+ G+ EA+++F +M + T++ VL A A V + +H V+K
Sbjct: 335 MICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVK 394
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
D+ + V +++DMY + G++D A F + +++ SW +I G + EA L
Sbjct: 395 RDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQL 454
Query: 379 FYKMIKA------------------GVR--PNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
+M G R PN IT +++L C+ G ++
Sbjct: 455 VREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKE-IHGYA 513
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+E + +VD+ + G L A + + + + + + W L+ A +H
Sbjct: 514 VRHALESDLAVGSALVDMYAKCGCLALARAVFDRLP-RRNVITWNVLIMAYGMH 566
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/674 (36%), Positives = 383/674 (56%), Gaps = 64/674 (9%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
T+ ++F NNV+ WNS+I L G EAL +S +++ L P TFP I +
Sbjct: 65 TSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINA 124
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
C+ L D K H + GF D+++ +ALIDMY + +L ARK+F+E+P +R++V
Sbjct: 125 CAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP--LRDVV 182
Query: 143 SWTSMLTGYVQNDNAREALLLF----KEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
SW S+++GY N EAL ++ K F+ E + D + I S+L AC
Sbjct: 183 SWNSLISGYNANGYWNEALEIYYQSIKLFM----------EMVNQFKPDLLTITSILQAC 232
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ + H ++I G++ + N LI+ YA+ G++ S++VF GM KD+V+WN
Sbjct: 233 GHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWN 292
Query: 259 SIIAIYAQNGLAAEALDVFDQM------------------------------VKSTDVKC 288
S+I +Y QNG ++L VF+ M +++ V
Sbjct: 293 SMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTP 352
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+ T+ ++L + L R GK IH + K+ LE V VG +I+MY KCG + + + F
Sbjct: 353 DMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVF 412
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
MK K+V +WTA+I+ GM+ ++A+ F +M AG+ P+++ FV+++ ACSH+GLV+
Sbjct: 413 KLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVE 472
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
EG ++ + M ++ IEP +EHY C+VDLL R+ L +A D I M +K D +WG+LL A
Sbjct: 473 EGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSA 532
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
CR+ + ++ E ++++ EL P++ GY+VL+SNIYA G+W+ V R +K R L K P
Sbjct: 533 CRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDP 592
Query: 529 GFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKE 588
G S +E++ KV+ F G K Q E++ + L L + + GY+ ++ V+HD+D++EK
Sbjct: 593 GCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKR 652
Query: 589 MTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRF 630
L HSE+LA NLRVC DCHTV + ISK+V RE++VRD+ RF
Sbjct: 653 DILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRF 712
Query: 631 HYFKDGLCSCGDYW 644
H FKDG CSCGDYW
Sbjct: 713 HVFKDGACSCGDYW 726
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 257/638 (40%), Positives = 370/638 (57%), Gaps = 36/638 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSAL 86
+F+K +KN V +W +I LA+ G + EA+ F M S P R T I C+ +
Sbjct: 217 VFDKMREKN-VVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEI 275
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L GK+ H G D+ V +L+DMY+KCG + +ARK+FD + R N++SWT+
Sbjct: 276 QFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGM--REHNVMSWTA 333
Query: 147 MLTGYVQNDNA--REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++ GYV+ REA+ +F LL+ GG + N + VL AC+ +
Sbjct: 334 LVNGYVRGGGGYEREAMRMFSNMLLQ----GGVAPNC-------FTFSGVLKACASLPDF 382
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
E HG IK G + VGN L+ YA+ G ++ +RK FD + EK+ V+ +
Sbjct: 383 DFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTN 442
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
++ D+ D+ V+ ++ T +++L A +G + G+ IH V+K+
Sbjct: 443 VKDFNLNSEQDL-DREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTD 501
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+ V ++I MY KCG + A + FN M++ NV +WT++I G+ H A +AL+LFY M++
Sbjct: 502 LSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLE 561
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
GV+PN +T+++VLSACSH GL+ E W +M I P +EHY CMVDLLGR+G L
Sbjct: 562 TGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLS 621
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
EA + I M AD +VW + LG+CR+H+N LGE AAK + E EP++ ++LLSN+YA
Sbjct: 622 EAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYA 681
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
GRWEDV R MK +++ K G S +E+ +VH F VGD HP+ ++IYE L+EL +
Sbjct: 682 TEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELAL 741
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
K++ VGYV + V+HDV+ E+KE L HSEKLA NLRVCGD
Sbjct: 742 KIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGD 801
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CHT I+ IS V REIVVRD+ RFH+ KDG CSC DYW
Sbjct: 802 CHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 185/354 (52%), Gaps = 25/354 (7%)
Query: 63 SMRKLSLTPTRSTF-------PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALI 115
++ L+LT T ST +K C + H GK H + D + ++LI
Sbjct: 35 AITTLNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLI 94
Query: 116 DMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG 175
+YSK + A +F + R++VS++S+++ + N N +A+ +F + LL+
Sbjct: 95 TLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQ----- 149
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG-FDSEVGVGNTLIDAYA 234
D V+ + +V+ AC + GFV+K G FDS V VG LID +
Sbjct: 150 ------DGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFV 203
Query: 235 RG---GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
+G ++ +RKVFD M EK+ VTW +I AQ G EA+D+F +M+ S+ +
Sbjct: 204 KGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRF 263
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
TL+ ++ A + L LGK +H VI+ L + VG S++DMY KCG V ARK F+ M
Sbjct: 264 TLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGM 323
Query: 352 KEKNVRSWTAMIAGY--GMHCRAREALDLFYKM-IKAGVRPNYITFVSVLSACS 402
+E NV SWTA++ GY G REA+ +F M ++ GV PN TF VL AC+
Sbjct: 324 REHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACA 377
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK--EKNVRSWTAMIAG 365
LGK +H ++ +L ++ S+I +Y K A F M+ +++V S++++I+
Sbjct: 70 LGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISC 129
Query: 366 YGMHCRAREALDLFYKMI-KAGVRPNYITFVSVLSACSHAGLVQEG 410
+ + +A+++F +++ + GV PN F +V+ AC G + G
Sbjct: 130 FANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTG 175
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/659 (38%), Positives = 370/659 (56%), Gaps = 69/659 (10%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SWN+VI ++ GD ALR F M K + P +T+ I S L G++ H +
Sbjct: 175 SWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEI 233
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
GF D+ V++ALI+MY KCG +AR++FD++ +R ++VSW M+ YV N + E
Sbjct: 234 VANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKR--DMVSWNVMIGCYVLNGDFHE 291
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
AL L+++ +E + + FV S+L ACS V H +++RG
Sbjct: 292 ALELYQKLDME------GFKRTKATFV------SILGACSSVKALAQGRLVHSHILERGL 339
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV------------------------ 255
DSEV V L++ YA+ G ++ +RKVF+ M +DAV
Sbjct: 340 DSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKV 399
Query: 256 ----------TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
+WN++I Y QNG A A+ +F +M + +K +AVT AVL A A LG
Sbjct: 400 FDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGR 459
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L K +H Q+ + +LE +V+V ++I+MY +CG ++ A + F KEK V SWTAM+A
Sbjct: 460 LSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAA 519
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
+ + R EALDLF +M GV+P+ +T+ S+L C+H G +++GW + M + P
Sbjct: 520 FSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAP 579
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
+H+ MVDLLGR+G+L +A +L+E M + D V W + L ACRIH ++LGE AA+++
Sbjct: 580 TADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERV 639
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
+EL+P++ ++ +SNIYA G WE V R M+ R L K PG S +E+ GK+H F G
Sbjct: 640 YELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSG 699
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
K HP+ ++I E L L+ ++ GYV D +V+HDV + EKE L HSEK+A
Sbjct: 700 GKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLV 759
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF-KDGLCSCGDYW 644
NLRVC DCHT + I+++ R+I+VRD RFH F DG CSCGDYW
Sbjct: 760 SSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 209/398 (52%), Gaps = 19/398 (4%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P TF + SCS+ D+ G+ H++ F RD V +ALI MY KC L DAR +
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F+ + R RN+VSW +M+ Y QN ++ EAL+L+ N + D V
Sbjct: 65 FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRM------------NLQGLGTDHVT 112
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
SVL ACS + H V G DS + N L+ YAR G V ++++F +
Sbjct: 113 FVSVLGACSSLAQG---REIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQ 169
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+D +WN++I ++Q+G + AL +F +M DVK N+ T V+ + VL G+
Sbjct: 170 TRDETSWNAVILAHSQSGDWSGALRIFKEM--KCDVKPNSTTYINVISGFSTPEVLPEGR 227
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
IH +++ + ++V T++I+MY KCG AR+ F++MK++++ SW MI Y ++
Sbjct: 228 KIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNG 287
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
EAL+L+ K+ G + TFVS+L ACS + +G +++ E ++ V
Sbjct: 288 DFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVA 346
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+V++ + G L+EA + MK + D V W +L+GA
Sbjct: 347 TALVNMYAKCGSLEEARKVFNAMKNR-DAVAWSTLIGA 383
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 229/469 (48%), Gaps = 56/469 (11%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ NV SWN++IA A+ G S EAL + M L TF + +CS+L G++
Sbjct: 72 QRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GRE 128
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H + F G +++AL+ MY++ G + DA+++F + + R+ SW +++ + Q+
Sbjct: 129 IHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSL--QTRDETSWNAVILAHSQS 186
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+ AL +FKE +C +V +S +V+S S V H +
Sbjct: 187 GDWSGALRIFKEM-----KC--------DVKPNSTTYINVISGFSTPEVLPEGRKIHAEI 233
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+ GFD+++ V LI+ Y + G +R+VFD M ++D V+WN +I Y NG EAL
Sbjct: 234 VANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEAL 293
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+++ Q + K T ++L A + + L G+ +H +++ L+ V V T++++M
Sbjct: 294 ELY-QKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNM 352
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIA-----GYGMHCR-AREALD----------- 377
Y KCG ++ ARK FN MK ++ +W+ +I GYG R AR+ D
Sbjct: 353 YAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWN 412
Query: 378 -----------------LFYKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
+F +M AG++P+ +TF++VL AC+ G + E L+
Sbjct: 413 AMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE-VKALHAQIS 471
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
E +E V ++++ R G L+EA L K K V W +++ A
Sbjct: 472 ESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKT-VVSWTAMVAA 519
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 191/410 (46%), Gaps = 51/410 (12%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K + K ++ SWN +I GD EAL + + T++TF + +CS++
Sbjct: 264 VFDK-MKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVK 322
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR---------- 137
L G+ H G +V V++AL++MY+KCG L +ARK+F+ + R
Sbjct: 323 ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIG 382
Query: 138 ----------------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG 175
R+ +SW +M+T YVQN A A+ +F+E
Sbjct: 383 AYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMT------- 435
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
GA+ + D+V +VL AC+ + + H + + +S V V NTLI+ YAR
Sbjct: 436 GAA----GLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYAR 491
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
G ++ + ++F EK V+W +++A ++Q G AEALD+F +M VK + VT ++
Sbjct: 492 CGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEM-DLEGVKPDDVTYTS 550
Query: 296 VLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-E 353
+L H G L G + D L + +++D+ + G++ A++ M E
Sbjct: 551 ILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFE 610
Query: 354 KNVRSWTAMIAGYGMHCR---AREALDLFYKMIKAGVRPNYITFVSVLSA 400
+ +W + +H + A + Y++ + P YI ++ +A
Sbjct: 611 PDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP-YIAMSNIYAA 659
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/630 (39%), Positives = 361/630 (57%), Gaps = 69/630 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV N +I G E ++ F +M + P TFPC +K+CS ++ G
Sbjct: 101 IPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIG 160
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H A G +FV + L+ MY KCG LS+AR + DE+ +R ++VSW S++ GY
Sbjct: 161 KKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR--DVVSWNSLVAGYA 218
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN +AL + +E S + D+ +AS+L A S T V
Sbjct: 219 QNQRFDDALEVCREM------------ESVKISHDAGTMASLLPAVSNTTTENVM----- 261
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+V + +F M +K V+WN +I +Y +N + E
Sbjct: 262 YV----------------------------KDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 293
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A++++ M ++ + +AV++++VL A L LGK IH + + L ++++ ++I
Sbjct: 294 AVELYSGM-EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 352
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG +D AR F MK ++V SWTAMI+ YG R +A+ LF KM +G+ P+ I
Sbjct: 353 DMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSI 412
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
FV+ L+ACSHAGL++EG M + I P +EH CMVDLLGRAGK+KEAY I+
Sbjct: 413 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQE 472
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M ++ + VWG+LLGACR+H N D+G +AA KLF+L P GY+VLLSNIYA AGRWE+V
Sbjct: 473 MPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 532
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R++MK++ L K PG S VE+ +H FLVGD+ HPQ +IY L+ L K++E+GYV
Sbjct: 533 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGYV 592
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA---------------------NLRVCGDCHTVI 611
D S +HDV++E+KE L +HSEKLA NLR+CGDCH
Sbjct: 593 PDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRICGDCHVAA 652
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
+LIS++ REI++RD+ RFH F+ G+CSC
Sbjct: 653 KLISQITSREIIIRDTNRFHVFRFGVCSCA 682
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 182/411 (44%), Gaps = 55/411 (13%)
Query: 62 SSMRKLSL----TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM 117
SS+ KL L +P + F + DL + + H + + + L+
Sbjct: 26 SSVPKLELDQKNSPKETAFMLG-QVLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRA 84
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
Y+ +++ ARK+FDEIP+ RN++ M+ YV N RE + +F C
Sbjct: 85 YASLKDVATARKVFDEIPE--RNVIIINVMIRSYVNNGFYREGIQVFGTM------C--- 133
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
S +V D VL ACS + + HG K G S + VGN L+ Y + G
Sbjct: 134 ---SCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCG 190
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
+ +R V D M +D V+WNS++A YAQN +AL+V +M +S + +A T++++L
Sbjct: 191 FLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREM-ESVKISHDAGTMASLL 249
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A+++ E+V MY K F +M +K++
Sbjct: 250 PAVSNTTT-----------------ENV--------MYVK--------DMFFKMGKKSLV 276
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SW MI Y + EA++L+ M G P+ ++ SVL AC + G +
Sbjct: 277 SWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 336
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ I P + ++D+ + G L A D+ E MK + D V W +++ A
Sbjct: 337 ERKKLI-PNLLLENALIDMYAKCGCLDRARDVFENMKSR-DVVSWTAMISA 385
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 151/321 (47%), Gaps = 19/321 (5%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +I +G L+ AYA V +RKVFD + E++ + N +I Y NG
Sbjct: 63 HSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFY 122
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
E + VF M S VK + T VL A + G + +GK IH K+ L ++ VG
Sbjct: 123 REGIQVFGTMC-SCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNG 181
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ MY KCG + AR ++M ++V SW +++AGY + R +AL++ +M + +
Sbjct: 182 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHD 241
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
T S+L A S+ E ++ M + + V + M+ + + EA +L
Sbjct: 242 AGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS-WNVMIGVYMKNAMPVEAVELY 298
Query: 451 EGMKV---KADFVVWGSLLGACRIHKNVDLGE-----IAAKKLFELEPNNCGYHVLLSNI 502
GM+ + D V S+L AC + LG+ I KKL PN + L+ ++
Sbjct: 299 SGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI---PNLLLENALI-DM 354
Query: 503 YANAGRWEDVERTRSLMKNRR 523
YA G ++R R + +N +
Sbjct: 355 YAKCGC---LDRARDVFENMK 372
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 5/190 (2%)
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
K A L VL L LR +H ++I DL + +G ++ Y V ARK
Sbjct: 40 KETAFMLGQVLDTYPDLKTLR---TVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARK 96
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F+++ E+NV MI Y + RE + +F M V+P++ TF VL ACS +G
Sbjct: 97 VFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGN 156
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ G ++ + + + +V + G+ G L EA +++ M + D V W SL+
Sbjct: 157 IVIG-KKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLV 214
Query: 467 GACRIHKNVD 476
++ D
Sbjct: 215 AGYAQNQRFD 224
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 272/666 (40%), Positives = 379/666 (56%), Gaps = 62/666 (9%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL-TPTRSTFPCAIKSCSALHDLHSGKQ 94
++ SWNSV++ D+ AL F M L +P + + +C++L G+Q
Sbjct: 326 QDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQ 385
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H + G DVFV +A++DMY+KCG++ +A K+F + + +++VSW +M+TGY Q
Sbjct: 386 VHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRM--KFKDVVSWNAMVTGYSQA 443
Query: 155 DNAREALLLFKEFLLEESECG--------------GASENSDNVF---------VDSVAI 191
AL LF+ E E G + +VF + V +
Sbjct: 444 GRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTL 503
Query: 192 ASVLSACSRVTVNGVTEG--AHGFVIK-----RGFDS---EVGVGNTLIDAYARGGHVDV 241
S+LSAC V+V + G H + IK G D ++ V N LID YA+ +V
Sbjct: 504 VSLLSAC--VSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEV 561
Query: 242 SRKVFDGMIEKD--AVTWNSIIAIYAQNGLAAEALDVFDQMVK-STDVKCNAVTLSAVLL 298
+RK+FD + KD VTW +I YAQ+G A AL +F M K +K N TLS L+
Sbjct: 562 ARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALV 621
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVI--VGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
A A L LR G+ +H V++ + SV+ V +IDMY K G VD A+ F+ M ++N
Sbjct: 622 ACARLAALRFGRQVHAYVLR-NFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNA 680
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SWT+++ GYGMH R +AL +F +M K + P+ ITF+ VL ACSH+G+V G ++ N
Sbjct: 681 VSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNR 740
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M +F ++PG EHY CMVDL GRAG+L EA LI M ++ VVW +LL ACR+H NV+
Sbjct: 741 MSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVE 800
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
LGE AA +L ELE N G + LLSNIYANA RW+DV R R MK + K PG S ++ R
Sbjct: 801 LGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGR 860
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
V F VGD+ HPQ ++IYE L +L +++ +GYV + +HDVD EEK L HSE
Sbjct: 861 KGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSE 920
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLR+CGDCH+ I ISK+++ EI++RDS RFH+FK+G C
Sbjct: 921 KLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSC 980
Query: 639 SCGDYW 644
SC YW
Sbjct: 981 SCKGYW 986
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 145/486 (29%), Positives = 222/486 (45%), Gaps = 61/486 (12%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
++VF WN +I G + + M+ L TP TFP K+C+ L L G
Sbjct: 221 PSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGAS 280
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR-IRNIVSWTSMLTGYVQ 153
H GF +VFV +A++ MY KCG L A +FD++ R I+++VSW S+++ Y+
Sbjct: 281 LHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMW 340
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+A AL LF + + D +++ ++L AC+ + + HGF
Sbjct: 341 ASDANTALALFHKMTTRHL-----------MSPDVISLVNILPACASLAASLRGRQVHGF 389
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM------------------------ 249
I+ G +V VGN ++D YA+ G ++ + KVF M
Sbjct: 390 SIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHA 449
Query: 250 -----------IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
IE D VTW ++I YAQ G EALDVF QM + N VTL ++L
Sbjct: 450 LSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGS-RPNVVTLVSLLS 508
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLE--------ESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
A +G L GK H IK L + + V +IDMY KC ++ARK F+
Sbjct: 509 ACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDS 568
Query: 351 M--KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK--AGVRPNYITFVSVLSACSHAGL 406
+ K+++V +WT MI GY H A AL LF M K ++PN T L AC+
Sbjct: 569 VSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAA 628
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
++ G + F + C++D+ ++G + A + + M + + V W SL+
Sbjct: 629 LRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQR-NAVSWTSLM 687
Query: 467 GACRIH 472
+H
Sbjct: 688 TGYGMH 693
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 187/383 (48%), Gaps = 25/383 (6%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKN---NVFSWNSVIADLARGGDSVEA 57
MK S +++V+ + + +LF + ++N +V +W +VI A+ G EA
Sbjct: 425 MKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEA 484
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFH--------RDVF 109
L F M P T + +C ++ L GK+ H A F + D+
Sbjct: 485 LDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLK 544
Query: 110 VSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLL 169
V + LIDMY+KC ARK+FD + + R++V+WT M+ GY Q+ +A AL LF
Sbjct: 545 VINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFS---- 600
Query: 170 EESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS-EVGVGNT 228
G + ++ + ++ L AC+R+ H +V++ + S + V N
Sbjct: 601 ------GMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANC 654
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
LID Y++ G VD ++ VFD M +++AV+W S++ Y +G +AL VFD+M K V
Sbjct: 655 LIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVP- 713
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKA 347
+ +T VL A +H G++ G +++ K ++ ++D++ + G++ A K
Sbjct: 714 DGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKL 773
Query: 348 FNQMK-EKNVRSWTAMIAGYGMH 369
N+M E W A+++ +H
Sbjct: 774 INEMPMEPTPVVWVALLSACRLH 796
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 124/500 (24%), Positives = 208/500 (41%), Gaps = 89/500 (17%)
Query: 58 LRAFSSMRKL---SLTPTR----STFP-CAIKSCSALHDLHSGKQAHQQAFIFG--FHRD 107
LR F KL T TR +T P A+K C++L K HQQ+ + G FH
Sbjct: 138 LRCFPIKSKLLQSQFTNTRLLSCATIPITALKECNSLAH---AKLLHQQSIMQGLLFH-- 192
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
+++ LI Y + A L + +P ++ W ++ + + R+ L+++
Sbjct: 193 --LATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQM 250
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN 227
S D V AC+ ++ + H V + GF S V V N
Sbjct: 251 ------------KSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCN 298
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEK---DAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
++ Y + G + + +FD + + D V+WNS+++ Y A AL +F +M
Sbjct: 299 AVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRH 358
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+ + ++L +L A A L G+ +H I+ L + V VG +++DMY KCG+++ A
Sbjct: 359 LMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEA 418
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAR------------------------------- 373
K F +MK K+V SW AM+ GY R
Sbjct: 419 NKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQR 478
Query: 374 ----EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI------ 423
EALD+F +M G RPN +T VS+LSAC G + G H + I
Sbjct: 479 GQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHG-----KETHCYAIKFILNL 533
Query: 424 ---EPGVEHYGC---MVDLLGRAGKLKEAYDLIEGMKVK-ADFVVWGSLLGACRIHKNVD 476
+PG + ++D+ + + A + + + K D V W ++G H + +
Sbjct: 534 DGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDAN 593
Query: 477 LGEIAAKKLFELE----PNN 492
+F+++ PN+
Sbjct: 594 NALQLFSGMFKMDKSIKPND 613
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 18/192 (9%)
Query: 8 SVSSVVSN--VDKHSTNTNLTT---LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
SV V+N +D +S + ++ T +F+ +N V SW S++ G +ALR F
Sbjct: 646 SVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAV-SWTSLMTGYGMHGRGEDALRVFD 704
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVS------SALID 116
MRK+ L P TF + +CS HSG H F +D V + ++D
Sbjct: 705 EMRKVPLVPDGITFLVVLYACS-----HSGMVDHGINFFNRMSKDFGVDPGPEHYACMVD 759
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
++ + G L +A KL +E+P +V W ++L+ + N L ES G
Sbjct: 760 LWGRAGRLGEAMKLINEMPMEPTPVV-WVALLSACRLHSNVELGEFAANRLLELESGNDG 818
Query: 177 ASENSDNVFVDS 188
+ N++ ++
Sbjct: 819 SYTLLSNIYANA 830
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/675 (37%), Positives = 378/675 (56%), Gaps = 50/675 (7%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFS---------WNSVIADLARG 51
M L S + SNV S +L F++ V VF WN++I L +
Sbjct: 128 MLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKN 187
Query: 52 GDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVS 111
++++ F M + ST + + + L +L G A GF +V
Sbjct: 188 CCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVL 247
Query: 112 SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
+ LI +YSKCG+++ AR LF I + +++++ +M++G+ N ++ LF+E L
Sbjct: 248 TGLISLYSKCGDVNTARLLFRRINRP--DLIAYNAMISGFTANGGTECSVKLFRELLFSG 305
Query: 172 SECGGASENSDNVFVDSVAIASVLS----ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN 227
S + V + + S ACS HGF +K G V
Sbjct: 306 ERV------SSSTIVGLIPLHSPFGHLHLACS----------IHGFCVKSGIILNPTVST 349
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
Y + +D++R +FD EK V WN++I+ Y QNG A+ +F +M+K T+
Sbjct: 350 AFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMK-TEFT 408
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
NAVT++ +L A A LG L GK +H + +LE ++ V T+++DMY KCG + A +
Sbjct: 409 PNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQL 468
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F+ M EKN +W MI GYG+H EAL L+ +M+ G P+ +TF+SVL ACSHAGLV
Sbjct: 469 FDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLV 528
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
EG + M +++ IEP +EHY CMVD+LGR+G+L++A + I+ M V+ VWG+LLG
Sbjct: 529 GEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLG 588
Query: 468 ACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKT 527
AC IHK+ D+ +A+++LFEL+P + GY+VLLSNIY+ + R ++K R+LAK+
Sbjct: 589 ACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKS 648
Query: 528 PGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEK 587
PG +L+E+ G H F+ GD+ H IY LE+L K++E+GY + +HDV++EEK
Sbjct: 649 PGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEK 708
Query: 588 EMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
E+ + +HSEKLA NLRVC DCHT + ISK+ +R IVVRD+ R
Sbjct: 709 ELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANR 768
Query: 630 FHYFKDGLCSCGDYW 644
FH+FKDG+CSCGDYW
Sbjct: 769 FHHFKDGICSCGDYW 783
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/612 (40%), Positives = 374/612 (61%), Gaps = 42/612 (6%)
Query: 53 DSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS 112
D A++A S++ L +T+ IK C + +H G + + G +F+ +
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
LI+MY K L+DA +LFD++PQR N++SWT+M++ Y + ++AL L L
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQR--NVISWTTMISAYSKCKIHQKALELLVLML---- 154
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE--GAHGFVIKRGFDSEVGVGNTLI 230
DNV + +SVL +C NG+++ H +IK G +S+V V + LI
Sbjct: 155 --------RDNVRPNVYTYSSVLRSC-----NGMSDVRMLHCGIIKEGLESDVFVRSALI 201
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
D +A+ G + + VFD M+ DA+ WNSII +AQN + AL++F +M ++ + A
Sbjct: 202 DVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA 261
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
TL++VL A L +L LG H ++K D + +I+ +++DMYCKCG ++ A + FNQ
Sbjct: 262 -TLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQ 318
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
MKE++V +W+ MI+G + ++EAL LF +M +G +PNYIT V VL ACSHAGL+++G
Sbjct: 319 MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
W++ +M + I+P EHYGCM+DLLG+AGKL +A L+ M+ + D V W +LLGACR
Sbjct: 379 WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACR 438
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
+ +N+ L E AAKK+ L+P + G + LLSNIYAN+ +W+ VE R+ M++R + K PG
Sbjct: 439 VQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGC 498
Query: 531 SLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMT 590
S +E+ ++HAF++GD HPQ ++ + L +L +L +GYV + V+ D++ E+ E +
Sbjct: 499 SWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDS 558
Query: 591 LRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHY 632
LR HSEKLA NLR+CGDCH +L SK+ R IV+RD R+H+
Sbjct: 559 LRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHH 618
Query: 633 FKDGLCSCGDYW 644
F+DG CSCGDYW
Sbjct: 619 FQDGKCSCGDYW 630
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 125/240 (52%), Gaps = 23/240 (9%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++F++ V + + WNS+I A+ S AL F M++ ++T +++C+ L
Sbjct: 215 SVFDEMVTGDAIV-WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G QAH I + +D+ +++AL+DMY KCG L DA ++F+++ + R++++W++
Sbjct: 274 ALLELGMQAH--VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKE--RDVITWST 329
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M++G QN ++EAL LF E + G N + I VL ACS + +
Sbjct: 330 MISGLAQNGYSQEALKLF-----ERMKSSGTKPN-------YITIVGVLFACSHAGL--L 375
Query: 207 TEGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
+G + F + G D +ID + G +D + K+ + M E DAVTW +++
Sbjct: 376 EDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLG 435
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 3/182 (1%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ + + +V +W+++I+ LA+ G S EAL+ F M+ P T + +CS
Sbjct: 315 VFNQ-MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAG 373
Query: 88 DLHSG-KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G ++G +ID+ K G+L DA KL +E+ + V+W +
Sbjct: 374 LLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE-PDAVTWRT 432
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+L N A K+ + + E G N++ +S SV +R+ G+
Sbjct: 433 LLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
Query: 207 TE 208
+
Sbjct: 493 KK 494
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/639 (38%), Positives = 367/639 (57%), Gaps = 42/639 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ D++ V SWNS+I+ + G + F M + +T +C+ +
Sbjct: 308 LFDELTDRD-VISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIG 366
Query: 88 DLHSGKQAHQQAFIFG-FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L GK H + R+V ++ L+DMYSKCG+L+ A ++F+ + ++ +VSWTS
Sbjct: 367 TLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEK--TVVSWTS 424
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+TGYV+ + A+ LF E S V D A+ S+L+AC+ +NG
Sbjct: 425 MITGYVREGLSDGAIKLFDEM------------KSRGVVPDVYAVTSILNACA---INGN 469
Query: 207 TEGA---HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ H ++ + ++ V N L D YA+ G + + VF M +KD ++WN++I
Sbjct: 470 LKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGG 529
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y +N L EAL +F +M + + K + T++ +L A A L L G+ IH ++ E
Sbjct: 530 YTKNSLPNEALTLFAEMQRES--KPDGTTVACILPACASLAALDKGREIHGYALRNGYSE 587
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
V +++DMY KCG + LAR F+ + K++ SWT MIAGYGMH EA++ F +M
Sbjct: 588 DKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMR 647
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
G+ P+ ++F+S+L ACSH+GL+ EGW N M E IEP +EHY CMVDLL R G L
Sbjct: 648 MTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNL 707
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
+A+ I+ M +K D +WG+LL CRIH +V L E A+++FELEP N GY+VLL+NIY
Sbjct: 708 VKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIY 767
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A A +WE+V++ R + R L K PG S +E++GK++ F+ GD PQ +KI L+ L
Sbjct: 768 AEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLR 827
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
K++E GY + + D+ EKE+ L HSEKLA NLRVCG
Sbjct: 828 SKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCG 887
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH + + +SK REI++RDS RFH+FKDG CSC YW
Sbjct: 888 DCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 228/450 (50%), Gaps = 28/450 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K + ++ +F WN +I++ + G+ E++ F M +L + P TF +K +A+
Sbjct: 207 VFDK-LSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVA 265
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G+Q H GF+ V ++LI Y ++ A+KLFDE+ R+++SW SM
Sbjct: 266 RVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTD--RDVISWNSM 323
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GYV+N + +F + L+ V +D + +V AC+ + +
Sbjct: 324 ISGYVKNGLDDRGIEIFIKMLVF------------GVDIDLATMVNVFVACANIGTLLLG 371
Query: 208 EGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H + IK D EV NTL+D Y++ G ++ + +VF+ M EK V+W S+I Y +
Sbjct: 372 KVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVR 431
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
GL+ A+ +FD+M KS V + ++++L A A G L+ GK +HD + + +LE +
Sbjct: 432 EGLSDGAIKLFDEM-KSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSF 490
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V ++ DMY KCG + A F+ MK+K+V SW MI GY + EAL LF +M +
Sbjct: 491 VSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES 550
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGK 442
+P+ T +L AC+ + +G H + + G +VD+ + G
Sbjct: 551 -KPDGTTVACILPACASLAALDKGREI-----HGYALRNGYSEDKYVTNAVVDMYVKCGL 604
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
L A L + M D V W ++ +H
Sbjct: 605 LVLARSLFD-MIPNKDLVSWTVMIAGYGMH 633
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 205/395 (51%), Gaps = 23/395 (5%)
Query: 78 CAI-KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
C+I + C+ + G++ G D + L+ MY KCG+L + R +FD++ +
Sbjct: 154 CSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSE 213
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
I W M++ Y + N E++ LFK+ L E G + +S +S+L
Sbjct: 214 --SKIFLWNLMISEYSGSGNYGESINLFKQML----ELG--------IKPNSYTFSSILK 259
Query: 197 ACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
+ V V EG HG + K GF+S V N+LI Y G V ++K+FD + ++D
Sbjct: 260 CFAAVA--RVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDV 317
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
++WNS+I+ Y +NGL +++F +M+ V + T+ V +A A++G L LGK +H
Sbjct: 318 ISWNSMISGYVKNGLDDRGIEIFIKML-VFGVDIDLATMVNVFVACANIGTLLLGKVLHS 376
Query: 315 QVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
IK L+ V +++DMY KCG ++ A + F +M EK V SWT+MI GY +
Sbjct: 377 YSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSD 436
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
A+ LF +M GV P+ S+L+AC+ G ++ G ++ E N+E +
Sbjct: 437 GAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSG-KIVHDYIRENNLETNSFVSNAL 495
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
D+ + G +K+A+D+ MK K D + W +++G
Sbjct: 496 TDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMIGG 529
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 152/339 (44%), Gaps = 48/339 (14%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+G L+ Y + G + R VFD + E WN +I+ Y+ +G E++++F QM++
Sbjct: 187 LGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLE-L 245
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+K N+ T S++L A + + G+ +H + K+ V S+I Y +V A
Sbjct: 246 GIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCA 305
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
+K F+++ +++V SW +MI+GY + +++F KM+ GV + T V+V AC++
Sbjct: 306 QKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANI 365
Query: 405 GLVQEGWHWLNTMGHEFNIEPG-----VEHYGCMVDLLGRAGKLKEAYDLIEGMKVK--- 456
G + L + H ++I+ V ++D+ + G L A + E M K
Sbjct: 366 GTL-----LLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVV 420
Query: 457 -------------------------------ADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
D S+L AC I+ N+ G+I +
Sbjct: 421 SWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYI 480
Query: 486 FE--LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNR 522
E LE N+ + L+++YA G +D S MK +
Sbjct: 481 RENNLETNSFVSNA-LTDMYAKCGSMKDAHDVFSHMKKK 518
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/614 (38%), Positives = 375/614 (61%), Gaps = 35/614 (5%)
Query: 49 ARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDV 108
+R G ALR F ++ + P +TF A+ +C+ L DL G+ +AF G+ DV
Sbjct: 85 SRRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL 168
FV S+L+ +Y++ G + DA K+FD +P+R R V+W++M+ G+V +A+ +++
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFDRMPRRDR--VTWSTMVAGFVSAGQPLDAIQMYRRM- 200
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
D V D V + V+ AC+ + HG +++ G +V +
Sbjct: 201 -----------REDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATS 249
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
L+D YA+ G +DV+ +VF M+ ++ V+W+++I+ +AQNG + EAL +F M +++ ++
Sbjct: 250 LVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNM-QASGIQP 308
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
++ L + LLA +++G L+LG+ +H +++ + + I+GT+ IDMY KCG + A+ F
Sbjct: 309 DSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLF 367
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
N + ++++ W AMIA G H R ++AL LF +M + G+RP++ TF S+LSA SH+GLV+
Sbjct: 368 NMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVE 427
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
EG W M + F I P +HY C+VDLL R+G ++EA DL+ MK + +W +LL
Sbjct: 428 EGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSG 487
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
C +K ++LGE A + EL+P++ G L+SN+YA +W+ V + R LMK+ K P
Sbjct: 488 CLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMP 547
Query: 529 GFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKE 588
G S +E+RG HAFL+ D+ HPQ E+I + +L+++++++GY+ V HD+++E KE
Sbjct: 548 GCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKE 607
Query: 589 MTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRF 630
L HSEKLA NLRVCGDCH I+ ISK+ DREIVVRD+KRF
Sbjct: 608 QQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRF 667
Query: 631 HYFKDGLCSCGDYW 644
H+FKDG+CSC DYW
Sbjct: 668 HHFKDGVCSCRDYW 681
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 256/662 (38%), Positives = 388/662 (58%), Gaps = 38/662 (5%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L K+ VS+ + N+ N + + +V +WNS+I+ A G +EAL F
Sbjct: 229 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 288
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
SMR + + S+F IK C+ L +L +Q H +GF D + +AL+ YSKC
Sbjct: 289 SMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCM 348
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+ DA +LF E + N+VSWT+M++G++QND EA+ LF E + G N
Sbjct: 349 AMLDALRLFKETG-FLGNVVSWTAMISGFLQNDGKEEAVGLFSEM-----KRKGVRPNE- 401
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
F SV +L+A ++ + V H V+K ++ VG L+DAY + G VD +
Sbjct: 402 --FTYSV----ILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVDEA 451
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL-LAIA 301
KVF G+ KD V W++++A YAQ G A+ +F ++ K VK N T S++L + A
Sbjct: 452 AKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKG-GVKPNEFTFSSILNVCAA 510
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+ GK H IK L+ S+ V ++++ MY K G ++ A + F + +EK++ SW +
Sbjct: 511 TTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNS 570
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MI+GY H +A +ALD+F +M K V+ + +TF+ V +AC+HAGLV+EG + + M +
Sbjct: 571 MISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 630
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
I P EH CMVDL RAG+L++A +I+ M A +W ++L ACR+HK +LG +A
Sbjct: 631 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLA 690
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
A+K+ + P + +VLLSN+YA +G W++ + R LM R + K PG+S +E++ K +A
Sbjct: 691 AEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYA 750
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
FL GD+ HP ++IY LE+L+ +L+++GY D + V+ D+D E KE L HSE+LA
Sbjct: 751 FLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIA 810
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF-KDGLCSCGD 642
NLRVCGDCH VI+LI+K+ +REIVVRDS RFH+F DG+CSCGD
Sbjct: 811 FGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGD 870
Query: 643 YW 644
+W
Sbjct: 871 FW 872
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 139/449 (30%), Positives = 224/449 (49%), Gaps = 37/449 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K D++ S+ S++ +R G + EA R F +++ L + S F +K + L
Sbjct: 53 LFDKSPDRDRE-SYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLC 111
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G+Q H Q FGF DV V ++L+D Y K D R +FDE+ + RN+V+WT++
Sbjct: 112 DELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKE--RNVVTWTTL 169
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY +N E L LF E ++ +S A+ L + V G
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQ------------PNSFTFAAALGVLAEEGVGGRG 217
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H V+K G D + V N+LI+ Y + G+V +R +FD K VTWNS+I+ YA N
Sbjct: 218 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 277
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL EAL +F M + V+ + + ++++ A+L LR + +H V+K +
Sbjct: 278 GLDLEALGMFYSM-RLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNI 336
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
T+++ Y KC + A + F + NV SWTAMI+G+ + EA+ LF +M + G
Sbjct: 337 RTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKG 396
Query: 387 VRPNYITFVSVLSACS-------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
VRPN T+ +L+A HA +V+ + +T+G ++D +
Sbjct: 397 VRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVG------------TALLDAYVK 444
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
GK+ EA + G+ K D V W ++L
Sbjct: 445 LGKVDEAAKVFSGIDNK-DIVAWSAMLAG 472
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 150/279 (53%), Gaps = 19/279 (6%)
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK--EFLLEESECGGASENSDNV 184
A LFD+ P R R S+TS+L G+ ++ +EA LF + L E +C ++
Sbjct: 50 AHNLFDKSPDRDRE--SYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDC--------SI 99
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
F +SVL + + H IK GF +V VG +L+D Y +G + R
Sbjct: 100 F------SSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRN 153
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VFD M E++ VTW ++I+ YA+N L E L +F +M + + N+ T +A L +A G
Sbjct: 154 VFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRM-QDEGTQPNSFTFAAALGVLAEEG 212
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
V G +H V+K L++++ V S+I++Y KCG V AR F++ + K+V +W +MI+
Sbjct: 213 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 272
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
GY + EAL +FY M VR + +F S++ C++
Sbjct: 273 GYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCAN 311
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/653 (38%), Positives = 371/653 (56%), Gaps = 34/653 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
++++S K + + +F+ ++ V SW ++ A G + E+L+ + +M + +
Sbjct: 184 NALISMYAKCGSVRDARRVFDAMASRDEV-SWTTLTGAYAESGYAQESLKTYHAMLQEGV 242
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P+R T+ + +C +L L GKQ H Q H DV VS+AL MY KCG + DAR+
Sbjct: 243 RPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDARE 302
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F+ +P R ++++W +M+ G V + EA +F L EC V D V
Sbjct: 303 VFECLPNR--DVIAWNTMIGGLVDSGQLEEAHGMFHRML---KEC---------VAPDRV 348
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
++LSAC+R + H +K G S+V GN LI+ Y++ G + +R+VFD M
Sbjct: 349 TYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRM 408
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
++D V+W +++ YA G E+ F +M++ V+ N +T VL A ++ L+ G
Sbjct: 409 PKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQ-GVEANKITYMCVLKACSNPVALKWG 467
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K IH +V+K + + V +++ MY KCG V+ A + M ++V +W +I G +
Sbjct: 468 KEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQN 527
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
R EAL F M +RPN TFV+V+SAC LV+EG +M ++ I P +H
Sbjct: 528 GRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKH 587
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
Y CMVD+L RAG L EA D+I M K +WG+LL ACR H NV++GE AA++ +LE
Sbjct: 588 YACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLE 647
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
P N G +V LS IYA AG W DV + R LMK R + K PG S +E+ G+VH+F+ GD+ H
Sbjct: 648 PQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSH 707
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
P+ E+IY LE L +++ +GYV D V+HD+DQE KE + HSEKLA
Sbjct: 708 PRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPP 767
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT + ISK+ REI+ RD+ RFH+FK+G CSCGDYW
Sbjct: 768 ETPIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 228/449 (50%), Gaps = 36/449 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K+ +K+ V SWN +I+ A G EA F+ M++ L P + TF + +CS+
Sbjct: 101 LFDKFSNKS-VVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPA 159
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L+ G++ H + G + V +ALI MY+KCG + DAR++FD + R+ VSWT++
Sbjct: 160 ALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMAS--RDEVSWTTL 217
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
Y ++ A+E+L + L E V + +VLSAC +
Sbjct: 218 TGAYAESGYAQESLKTYHAMLQE------------GVRPSRITYMNVLSACGSLAALEKG 265
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H +++ S+V V L Y + G V +R+VF+ + +D + WN++I +
Sbjct: 266 KQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDS 325
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EA +F +M+K V + VT A+L A A G L GK IH + +K L V
Sbjct: 326 GQLEEAHGMFHRMLKEC-VAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRF 384
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G ++I+MY K G + AR+ F++M +++V SWTA++ GY + E+ F KM++ GV
Sbjct: 385 GNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGV 444
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDL---------LG 438
N IT++ VL ACS+ V W G E + E V G DL
Sbjct: 445 EANKITYMCVLKACSNP--VALKW------GKEIHAE--VVKAGIFADLAVANALMSMYF 494
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+ G +++A + EGM + D V W +L+G
Sbjct: 495 KCGSVEDAIRVSEGMSTR-DVVTWNTLIG 522
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 204/388 (52%), Gaps = 17/388 (4%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++SC DL GKQ H+ FG +V++ + L+ +Y CG +++AR+LFD+ +
Sbjct: 51 LQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSN--K 108
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++VSW M++GY +EA LF L+++ + + D S+LSACS
Sbjct: 109 SVVSWNVMISGYAHRGLGQEAFNLFT--LMQQ----------EGLEPDKFTFVSILSACS 156
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
H V++ G + VGN LI YA+ G V +R+VFD M +D V+W +
Sbjct: 157 SPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTT 216
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+ YA++G A E+L + M++ V+ + +T VL A L L GK IH Q+++
Sbjct: 217 LTGAYAESGYAQESLKTYHAMLQE-GVRPSRITYMNVLSACGSLAALEKGKQIHAQIVES 275
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
+ V V T++ MY KCG V AR+ F + ++V +W MI G + EA +F
Sbjct: 276 EHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMF 335
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
++M+K V P+ +T++++LSAC+ G + G ++ + + V ++++ +
Sbjct: 336 HRMLKECVAPDRVTYLAILSACARPGGLACGKE-IHARAVKDGLVSDVRFGNALINMYSK 394
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLG 467
AG +K+A + + M K D V W +L+G
Sbjct: 395 AGSMKDARQVFDRMP-KRDVVSWTALVG 421
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 35/371 (9%)
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
VDS +L +C + V + H +++ G V + NTL+ Y G V+ +R++
Sbjct: 42 VDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRL 101
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD K V+WN +I+ YA GL EA ++F M + ++ + T ++L A +
Sbjct: 102 FDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLM-QQEGLEPDKFTFVSILSACSSPAA 160
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L G+ +H +V++ L + VG ++I MY KCG V AR+ F+ M ++ SWT +
Sbjct: 161 LNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGA 220
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGWH-- 412
Y A+E+L ++ M++ GVRP+ IT+++VLSAC HA +V+ H
Sbjct: 221 YAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSD 280
Query: 413 -WLNTMGHEFNIEPGV-----EHYGC-----------MVDLLGRAGKLKEAYDLIEGMK- 454
++T + I+ G E + C M+ L +G+L+EA+ + M
Sbjct: 281 VRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLK 340
Query: 455 --VKADFVVWGSLLGACRIHKNVDLG-EIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
V D V + ++L AC + G EI A+ + + ++ + L N+Y+ AG +D
Sbjct: 341 ECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKD 400
Query: 512 VERTRSLMKNR 522
+ M R
Sbjct: 401 ARQVFDRMPKR 411
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/624 (39%), Positives = 369/624 (59%), Gaps = 37/624 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
+WNS+IA R G +E F+ M+ + PT TF IKSC++L +L K +A
Sbjct: 262 TWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKA 321
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
GF D V +AL+ SKC E+ DA LF + + +N+VSWT+M++G +QN +
Sbjct: 322 LKSGFTTDQIVITALMVALSKCKEMDDALSLFS-LMEEGKNVVSWTAMISGCLQNGGNDQ 380
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+ LF + E G N +++L+ V V+ + H VIK +
Sbjct: 381 AVNLFSQMRRE-----GVKPNH-------FTYSAILTVHYPVFVSEM----HAEVIKTNY 424
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+ VG L+DAY + G+ + KVF+ + KD + W++++A YAQ G EA +F Q
Sbjct: 425 ERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQ 484
Query: 280 MVKSTDVKCNAVTLSAVLLAIAH-LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
++K +K N T S+V+ A A GK H IKM L ++ V ++++ MY K
Sbjct: 485 LIKE-GIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKR 543
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G +D A + F + KE+++ SW +MI+GY H +A++AL++F +M K + + +TF+ V+
Sbjct: 544 GNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVI 603
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
+AC+HAGLV++G + N+M ++ +I P ++HY CM+DL RAG L++A +I M
Sbjct: 604 TACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPG 663
Query: 459 FVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSL 518
VW +LLGA R+H+NV+LGE+AA+KL L+P + +VLLSN+YA AG W++ R L
Sbjct: 664 ATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKL 723
Query: 519 MKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSV 578
M R++ K PG+S +E++ K ++FL GD HP +IY L EL+++L++ GY D +V
Sbjct: 724 MDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNV 783
Query: 579 IHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
HD++ E+KE L HSE+LA NLRVCGDCH +L+S V R
Sbjct: 784 FHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQR 843
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
IVVRDS RFH+FKDGLCSCGDYW
Sbjct: 844 YIVVRDSNRFHHFKDGLCSCGDYW 867
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 221/435 (50%), Gaps = 36/435 (8%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N ++ +R + EAL F S+ SL P ST C C+ D G+Q H Q
Sbjct: 62 NQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVK 121
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
FG V V ++L+DMY K ++D R++FDE+ + RN+VSWTS+L GY N
Sbjct: 122 FGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGE--RNVVSWTSLLAGYSWNGLYGYVW 179
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
LF + E V + +++V++A V G+ H V+K GF+
Sbjct: 180 ELFCQMQYE------------GVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEE 227
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+ V N+LI Y+R G + +R VFD M +D VTWNS+IA Y +NG E ++F++M
Sbjct: 228 AIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKM- 286
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ VK +T ++V+ + A L L L K + + +K IV T+++ KC ++
Sbjct: 287 QLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEM 346
Query: 342 DLARKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS- 399
D A F+ M+E KNV SWTAMI+G + +A++LF +M + GV+PN+ T+ ++L+
Sbjct: 347 DDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTV 406
Query: 400 ------ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
+ HA +++ + +++G ++D + G +A + E +
Sbjct: 407 HYPVFVSEMHAEVIKTNYERSSSVG------------TALLDAYVKLGNTIDAVKVFEII 454
Query: 454 KVKADFVVWGSLLGA 468
+ K D + W ++L
Sbjct: 455 EAK-DLMAWSAMLAG 468
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 221/470 (47%), Gaps = 33/470 (7%)
Query: 16 VDKHSTNTNLTTLFNKYVDKN------------NVFSWNSVIADLARGGDSVEALRAFSS 63
VD S T+L ++ K + N NV SW S++A + G F
Sbjct: 125 VDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQ 184
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M+ + P R T I + + G Q H GF + V ++LI +YS+ G
Sbjct: 185 MQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGM 244
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L DAR +FD++ IR+ V+W SM+ GYV+N E +F + L
Sbjct: 245 LRDARDVFDKM--EIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLA------------G 290
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V + ASV+ +C+ + + + +K GF ++ V L+ A ++ +D +
Sbjct: 291 VKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDAL 350
Query: 244 KVFDGMIE-KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
+F M E K+ V+W ++I+ QNG +A+++F QM + VK N T SA+L H
Sbjct: 351 SLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQM-RREGVKPNHFTYSAIL--TVH 407
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
V +H +VIK + E S VGT+++D Y K G A K F ++ K++ +W+AM
Sbjct: 408 YPVFV--SEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAM 465
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
+AGY EA LF+++IK G++PN TF SV++AC+ E + +
Sbjct: 466 LAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMR 525
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ + +V + + G + A+++ + K + D V W S++ H
Sbjct: 526 LNNALCVSSALVTMYAKRGNIDSAHEVFKRQKER-DLVSWNSMISGYSQH 574
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 147/276 (53%), Gaps = 13/276 (4%)
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
A LFD+IP R + +L Y ++ +EAL LF L ++
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLL------------HSSLQP 91
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D ++ V + C+ + H +K G V VG +L+D Y + +V+ R+VF
Sbjct: 92 DESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVF 151
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D M E++ V+W S++A Y+ NGL ++F QM + V N T+S V+ A+ + GV+
Sbjct: 152 DEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQM-QYEGVLPNRYTVSTVIAALVNEGVV 210
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
+G +H V+K EE++ V S+I +Y + G + AR F++M+ ++ +W +MIAGY
Sbjct: 211 GIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGY 270
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
+ + E ++F KM AGV+P ++TF SV+ +C+
Sbjct: 271 VRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCA 306
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 176/350 (50%), Gaps = 30/350 (8%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+LF+ + NV SW ++I+ + G + +A+ FS MR+ + P T+ SA+
Sbjct: 351 SLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTY-------SAI 403
Query: 87 HDLHSG---KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+H + H + + R V +AL+D Y K G DA K+F+ I +++++
Sbjct: 404 LTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEII--EAKDLMA 461
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W++ML GY Q EA LF + + E G N +SV++AC+ T
Sbjct: 462 WSAMLAGYAQTGETEEAAKLFHQLIKE-----GIKPN-------EFTFSSVINACASPTA 509
Query: 204 NGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSII 261
+G H + IK ++ + V + L+ YA+ G++D + +VF E+D V+WNS+I
Sbjct: 510 -AAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMI 568
Query: 262 AIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MD 320
+ Y+Q+G A +AL+VFD+M K ++ +AVT V+ A H G++ G+ + +I
Sbjct: 569 SGYSQHGQAKKALEVFDEMQKR-NMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHH 627
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+ ++ + +ID+Y + G ++ A N+M W ++ +H
Sbjct: 628 INPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVH 677
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 125/264 (47%), Gaps = 23/264 (8%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
+SSSV + + + NT + ++ ++ +W++++A A+ G++ EA + F +
Sbjct: 426 RSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQL 485
Query: 65 RKLSLTPTRSTFPCAIKSC-SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
K + P TF I +C S GKQ H A + + VSSAL+ MY+K G
Sbjct: 486 IKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGN 545
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ A ++F Q+ R++VSW SM++GY Q+ A++AL +F E N
Sbjct: 546 IDSAHEVFKR--QKERDLVSWNSMISGYSQHGQAKKALEVFDEM------------QKRN 591
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVG----NTLIDAYARGGHV 239
+ VD+V V++AC+ G+ E + D + + +ID Y+R G +
Sbjct: 592 MDVDAVTFIGVITACTHA---GLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGML 648
Query: 240 DVSRKVFDGM-IEKDAVTWNSIIA 262
+ + + + M A W +++
Sbjct: 649 EKAMGIINEMPFPPGATVWRTLLG 672
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M+L+ + VSS + + N + K + ++ SWNS+I+ ++ G + +AL
Sbjct: 524 MRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEV 583
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVS------SAL 114
F M+K ++ TF I +C+ H+G Q + D ++ S +
Sbjct: 584 FDEMQKRNMDVDAVTFIGVITACT-----HAGLVEKGQKYFNSMINDHHINPTMKHYSCM 638
Query: 115 IDMYSKCGELSDARKLFDEIP 135
ID+YS+ G L A + +E+P
Sbjct: 639 IDLYSRAGMLEKAMGIINEMP 659
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/631 (38%), Positives = 370/631 (58%), Gaps = 34/631 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ SW ++I+ L++ EA+R F MR PT+ F AI++C++L + G
Sbjct: 66 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H A FG ++FV S L DMYSKCG + DA K+F+E+P ++ VSWT+M+ GY
Sbjct: 126 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP--CKDEVSWTAMIDGYS 183
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ EALL FK+ + EE V +D + S L AC + H
Sbjct: 184 KIGEFEEALLAFKKMIDEE------------VTIDQHVLCSTLGACGALKACKFGRSVHS 231
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWNSIIAIYAQNGLAA 271
V+K GF+S++ VGN L D Y++ G ++ + VF E ++ V++ +I Y +
Sbjct: 232 SVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIE 291
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+ L VF ++ + ++ N T S+++ A A+ L G +H QV+K++ +E V + +
Sbjct: 292 KGLSVFVEL-RRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSIL 350
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+DMY KCG ++ A +AF+++ + +W ++++ +G H ++A+ F +M+ GV+PN
Sbjct: 351 VDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNA 410
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
ITF+S+L+ CSHAGLV+EG + +M + + PG EHY C++DLLGRAG+LKEA + I
Sbjct: 411 ITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFIN 470
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M + + W S LGACRIH + ++G++AA+KL +LEP N G VLLSNIYAN +WED
Sbjct: 471 RMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWED 530
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
V R M++ + K PG+S V++ K H F D H + IYE L+ L +++ GY
Sbjct: 531 VRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGY 590
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
V SV D+D KE L HSE++A NLRVC DCH+ I+
Sbjct: 591 VPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKF 650
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
ISKV R+I+VRD+ RFH+F DG CSCGDYW
Sbjct: 651 ISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 221/440 (50%), Gaps = 31/440 (7%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
I++ + L GKQ H G+ F+++ L++MYSKCGEL A KLFD +PQ R
Sbjct: 12 IQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ--R 69
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+VSWT+M++G QN EA+ F + CG A +S + AC+
Sbjct: 70 NLVSWTAMISGLSQNSKFSEAIRTFCGMRI----CGEVPTQ--------FAFSSAIRACA 117
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ + + H +K G SE+ VG+ L D Y++ G + + KVF+ M KD V+W +
Sbjct: 118 SLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTA 177
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+I Y++ G EAL F +M+ +V + L + L A L + G+ +H V+K+
Sbjct: 178 MIDGYSKIGEFEEALLAFKKMIDE-EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKL 236
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDL 378
E + VG ++ DMY K G ++ A F E +NV S+T +I GY + + L +
Sbjct: 237 GFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSV 296
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW-LNTMGHEFNIEPGVEHYGCMVDLL 437
F ++ + G+ PN TF S++ AC++ +++G M F+ +P V +VD+
Sbjct: 297 FVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMY 354
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPN 491
G+ G L+ A + + + + W SL+ H LG+ A K FE ++PN
Sbjct: 355 GKCGLLEHAIQAFDEIGDPTE-IAWNSLVSVFGQH---GLGKDAI-KFFERMVDRGVKPN 409
Query: 492 NCGYHVLLSNIYANAGRWED 511
+ LL+ ++AG E+
Sbjct: 410 AITFISLLTGC-SHAGLVEE 428
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 3/213 (1%)
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
L+ V+ A LR GK +H +I + +++MY KCG++D A K F+ M
Sbjct: 7 ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
++N+ SWTAMI+G + + EA+ F M G P F S + AC+ G ++ G
Sbjct: 67 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
++ + +F I + + D+ + G + +A + E M K D V W +++
Sbjct: 127 Q-MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYSK 184
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
+ +A KK+ + E HVL S + A
Sbjct: 185 IGEFEEALLAFKKMID-EEVTIDQHVLCSTLGA 216
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/635 (39%), Positives = 384/635 (60%), Gaps = 43/635 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMR----KLSLTPTRSTFPCAIKSCSALHD 88
+D + SWNS+++ + G EAL+ + MR K L S + +S + LH
Sbjct: 343 MDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLH- 401
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
G Q H A G D+ V ++L+DMY+K + +FD++P + ++VSWT+++
Sbjct: 402 ---GMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDK--DVVSWTTII 456
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
G+ QN + AL LF+E LE + +D + I+S+L ACS + + +
Sbjct: 457 AGHAQNGSHSRALELFREVQLE------------GIDLDVMMISSILLACSGLKLISSVK 504
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H ++I++G S++ + N ++D Y G+VD + ++F+ + KD V+W S+I+ Y NG
Sbjct: 505 EIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNG 563
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
LA EAL++F ++K T V+ ++++L ++L A A L L+ GK IH +I+ +
Sbjct: 564 LANEALELF-HLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA 622
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
++++DMY +CG ++ +R FN ++ K++ WT+MI YGMH R A+DLF +M +
Sbjct: 623 STLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIA 682
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P++I FV+VL ACSH+GL+ EG +L +M +E+ +EP EHY C+VDLLGRA L+EAY
Sbjct: 683 PDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQ 742
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
++GM+V+ VW +LLGAC+IH N +LGEIAA+KL E++P N G +VL+SN+Y+ R
Sbjct: 743 FVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERR 802
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL-Q 567
W+DVE R MK L K PG S +E+ KVH F+ DK HPQ +IY L ++ KL +
Sbjct: 803 WKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAK 862
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E GYV V+H+ +EEK L HSE+LA NLRVCGDCH
Sbjct: 863 EGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHN 922
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LISK +RE+V+RD+ RFH+FK G+CSCGD W
Sbjct: 923 FCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 263/469 (56%), Gaps = 30/469 (6%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S+V K + LF++ +K +V SWNS+I+ + G S+EALR F M+K SL
Sbjct: 219 NSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASL 278
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P TF A+++C + G H ++ +VFV++ALI MY++ G++ +A
Sbjct: 279 APNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAAN 338
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F + + +SW SML+G+VQN EAL +F E + G D V
Sbjct: 339 IFYNMDD--WDTISWNSMLSGFVQNGLYHEAL----QFYHEMRDAGQKP--------DLV 384
Query: 190 AIASVLSACSRV--TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
A+ S+++A +R T++G+ H + +K G DS++ VGN+L+D YA+ + +FD
Sbjct: 385 AVISIIAASARSGNTLHGMQ--IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFD 442
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
M +KD V+W +IIA +AQNG + AL++F + V+ + + + +S++LLA + L ++
Sbjct: 443 KMPDKDVVSWTTIIAGHAQNGSHSRALELFRE-VQLEGIDLDVMMISSILLACSGLKLIS 501
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
K IH +I+ L + +++ I+D+Y +CG VD A + F ++ K+V SWT+MI+ Y
Sbjct: 502 SVKEIHSYIIRKGLSD-LVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYV 560
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+ A EAL+LF+ M + GV P+ I+ VS+LSA + +++G H F I G
Sbjct: 561 HNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEI-----HGFLIRKGF 615
Query: 428 EHYG----CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G +VD+ R G L+++ ++ ++ K D V+W S++ A +H
Sbjct: 616 VLEGSLASTLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMINAYGMH 663
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/442 (29%), Positives = 220/442 (49%), Gaps = 24/442 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+F+WN++I G+ + +L + MR + TFPC +K+C L D G + H
Sbjct: 144 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVH 203
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A G+ VFV+++++ MY+KC +L+ AR+LFD +P++ ++VSW SM++ Y N
Sbjct: 204 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEK-EDVVSWNSMISAYSSNGQ 262
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+ EAL LF E ++ ++ + L AC + H V+K
Sbjct: 263 SIEALRLFGEM------------QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLK 310
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
+ V V N LI YAR G + + +F M + D ++WNS+++ + QNGL EAL
Sbjct: 311 SSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQF 370
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
+ +M + K + V + +++ A A G G IH +K L+ + VG S++DMY
Sbjct: 371 YHEM-RDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYA 429
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
K + F++M +K+V SWT +IAG+ + AL+LF ++ G+ + + S
Sbjct: 430 KFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISS 489
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY---GCMVDLLGRAGKLKEAYDLIEGM 453
+L ACS L+ H + I G+ +VD+ G G + A + E +
Sbjct: 490 ILLACSGLKLISSVKEI-----HSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELI 544
Query: 454 KVKADFVVWGSLLGACRIHKNV 475
+ K D V W S++ +C +H +
Sbjct: 545 EFK-DVVSWTSMI-SCYVHNGL 564
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 201/417 (48%), Gaps = 25/417 (5%)
Query: 60 AFSSMRKLSLTPTRSTFP------CAIKSCSALHDLHSGKQAHQQAFIF-GFHRDVFVSS 112
AF S+ L + S F ++ C + L G+Q H VF+S+
Sbjct: 59 AFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLST 118
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
L+ MY KCG L DA KLFD +P + I +W +M+ YV N +L L++E +
Sbjct: 119 RLVFMYGKCGCLVDAEKLFDGMPH--KTIFTWNAMIGAYVTNGEPLGSLELYREMRV--- 173
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
+ +D+ +L AC + HG IK G+ S V V N+++
Sbjct: 174 ---------SGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGM 224
Query: 233 YARGGHVDVSRKVFDGMIEK-DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
Y + ++ +R++FD M EK D V+WNS+I+ Y+ NG + EAL +F +M K++ + N
Sbjct: 225 YTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKAS-LAPNTY 283
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
T A L A ++ G IH V+K +V V ++I MY + G++ A F M
Sbjct: 284 TFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNM 343
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
+ + SW +M++G+ + EAL +++M AG +P+ + +S+++A + +G G
Sbjct: 344 DDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGM 403
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
++ + ++ ++ +VD+ + +K + + M K D V W +++
Sbjct: 404 Q-IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDK-DVVSWTTIIAG 458
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 257/669 (38%), Positives = 368/669 (55%), Gaps = 66/669 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++N V SW ++I A+ EA + M + ++P TF + SC+
Sbjct: 214 VFHKMTERN-VVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPE 272
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L+ G++ H G D+ V++ALI MY KC + +AR++FD + +R +++SW++M
Sbjct: 273 ALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKR--DVISWSAM 330
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY Q+ + + LLE G VF + V S+L AC T +G
Sbjct: 331 IAGYAQSGYKDKESIDEVFQLLERMRREG-------VFPNKVTFMSILRAC---TAHGAL 380
Query: 208 EGA---HGFVIKRGFDSEVGVGNTLIDAYARGGHV------------------------- 239
E H + K GF+ + + + + YA+ G +
Sbjct: 381 EQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMY 440
Query: 240 ----DVS--RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
D+S KVF M ++ V+WN +IA YAQNG + ++ M K+ + + VT+
Sbjct: 441 IKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSM-KAEGFQPDRVTV 499
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
+L A L L GK +H + +K+ LE +V TS+I MY KCGQV AR F++M
Sbjct: 500 ITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSN 559
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
++ +W AM+AGYG H EA+DLF +M+K V PN IT +V+SACS AGLVQEG
Sbjct: 560 RDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREI 619
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
M +F + P +HYGCMVDLLGRAG+L+EA + I+ M + D VW +LLGAC+ H
Sbjct: 620 FRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHN 679
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
NV L E AA + ELEP+ ++ LSNIYA AGRW+D + R +M +R L K G S +
Sbjct: 680 NVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSI 739
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
E+ G++H F+ D HP+ + I+ LE L +++E GY DM V+HDVD +KE L
Sbjct: 740 EIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCH 799
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSEKLA NLRVCGDCHT + ISK+ REIV RD+ RFHYF +
Sbjct: 800 HSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNN 859
Query: 636 GLCSCGDYW 644
G CSCGD+W
Sbjct: 860 GTCSCGDFW 868
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 242/471 (51%), Gaps = 37/471 (7%)
Query: 48 LARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRD 107
L + G EA++ +++ L +T+ C I+ C+ GK H+Q G D
Sbjct: 31 LCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEID 90
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
+++ ++LI+ YSK +++ A ++F + +R++V+W+SM+ Y N++ +A F+
Sbjct: 91 IYLGNSLINFYSKFEDVASAEQVFRRMT--LRDVVTWSSMIAAYAGNNHPAKAFDTFERM 148
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN 227
N+ + + S+L AC+ ++ H V G +++V V
Sbjct: 149 ------------TDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVAT 196
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
LI Y++ G + V+ +VF M E++ V+W +II AQ+ EA ++++QM+++ +
Sbjct: 197 ALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQA-GIS 255
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
NAVT ++L + L G+ IH + + LE +IV ++I MYCKC V AR+
Sbjct: 256 PNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREI 315
Query: 348 FNQMKEKNVRSWTAMIAGYGMH-CRAREALD----LFYKMIKAGVRPNYITFVSVLSACS 402
F++M +++V SW+AMIAGY + +E++D L +M + GV PN +TF+S+L AC+
Sbjct: 316 FDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACT 375
Query: 403 HAGLVQEGWHW---LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
G +++G L+ +G E + + ++ + G + EA + M K +
Sbjct: 376 AHGALEQGRQIHAELSKVGFELDRSLQT----AIFNMYAKCGSIYEAEQVFSKMANK-NV 430
Query: 460 VVWGSLLGACRIHKNVDLGEI-AAKKLFELEP--NNCGYHVLLSNIYANAG 507
V W S L + G++ +A+K+F P N ++++++ YA G
Sbjct: 431 VAWTSFLSM-----YIKCGDLSSAEKVFSEMPTRNVVSWNLMIAG-YAQNG 475
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 225/466 (48%), Gaps = 51/466 (10%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V +W+S+IA A +A F M ++ P R TF +K+C+ L G++ H
Sbjct: 121 DVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIH 180
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G DV V++ALI MYSKCGE+S A ++F ++ + RN+VSWT+++ Q+
Sbjct: 181 TIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTE--RNVVSWTAIIQANAQHRK 238
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EA L+++ L G S N +V S+L++C+ H + +
Sbjct: 239 LNEAFELYEQMLQ-----AGISPN-------AVTFVSLLNSCNTPEALNRGRRIHSHISE 286
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA-AEALD 275
RG ++++ V N LI Y + V +R++FD M ++D ++W+++IA YAQ+G E++D
Sbjct: 287 RGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESID 346
Query: 276 VFDQMV---KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE---------- 322
Q++ + V N VT ++L A G L G+ IH ++ K+ E
Sbjct: 347 EVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIF 406
Query: 323 ---------------------ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
++V+ TS + MY KCG + A K F++M +NV SW
Sbjct: 407 NMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNL 466
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MIAGY + + +L M G +P+ +T +++L AC ++ G ++ +
Sbjct: 467 MIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERG-KLVHAEAVKL 525
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+E ++ + + G++ EA + + M + D V W ++L
Sbjct: 526 GLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNR-DTVAWNAMLA 570
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/698 (35%), Positives = 387/698 (55%), Gaps = 99/698 (14%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ ++S++S+I L + +++ FS M L P P K C+ L G
Sbjct: 76 IPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG 135
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR--------------- 137
KQ H + + G D FV ++ MY +CG + DARK+FD + +
Sbjct: 136 KQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARK 195
Query: 138 ------IR------------NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
+R NIVSW +L+G+ ++ +EA+++F++
Sbjct: 196 GCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI------------ 243
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
+ D V ++SVL + + + HG+VIK+G + V + +ID Y + GHV
Sbjct: 244 HHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHV 303
Query: 240 DVSRKVFD--------------------GMIEK---------------DAVTWNSIIAIY 264
+F+ G+++K + V+W SIIA
Sbjct: 304 YGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGC 363
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
AQNG EAL++F +M + VK N VT+ ++L A ++ L G+ H +++ L ++
Sbjct: 364 AQNGKDIEALELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN 422
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V VG+++IDMY KCG+++L++ FN M KN+ W +++ G+ MH +A+E + +F +++
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
++P++I+F S+LSAC GL EGW + M E+ I+P +EHY CMV+LLGRAGKL+
Sbjct: 483 TRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ 542
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
EAYDLI+ M + D VWG+LL +CR+ NVDL EIAA+KLF LEP N G +VLLSNIYA
Sbjct: 543 EAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYA 602
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
G W +V+ R+ M++ L K PG S ++++ +V+ L GDK HPQ ++I E ++E++
Sbjct: 603 AKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISK 662
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
++++ G+ ++ +HDV+++E+E L HSEKLA NLR+CGD
Sbjct: 663 EMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGD 722
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH VI+ IS REI +RD+ RFH+FKDG+CSCGD+W
Sbjct: 723 CHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 189/452 (41%), Gaps = 93/452 (20%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
QAH + G D ++S+ LI YS +DA + IP I S++S++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPD--PTIYSFSSLIYALTK 93
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+++ +F S + DS + ++ C+ ++ V + H
Sbjct: 94 AKLFTQSIGVFSRMF------------SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCV 141
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
G D + V ++ Y R G + +RKVFD M +KD VT ++++ YA+ G E
Sbjct: 142 SCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEV 201
Query: 274 LDVFDQMVKSTDVKCN-----------------------------------AVTLSAVLL 298
+ + +M +S+ ++ N VT+S+VL
Sbjct: 202 VRILSEM-ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLP 260
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ------------------ 340
++ +L +G+ IH VIK L + V +++IDMY K G
Sbjct: 261 SVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGV 320
Query: 341 -------------VDLARKAFNQMKEK----NVRSWTAMIAGYGMHCRAREALDLFYKMI 383
VD A + F KE+ NV SWT++IAG + + EAL+LF +M
Sbjct: 321 CNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ 380
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEF-NIEPGVEHYGCMVDLLGRA 440
AGV+PN++T S+L AC + + G H H N+ G ++D+ +
Sbjct: 381 VAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVG----SALIDMYAKC 436
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G++ + + M K + V W SL+ +H
Sbjct: 437 GRINLSQIVFNMMPTK-NLVCWNSLMNGFSMH 467
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 115/241 (47%), Gaps = 26/241 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF + + NV SW S+IA A+ G +EAL F M+ + P T P + +C +
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+ H A +V V SALIDMY+KCG ++ ++ +F+ +P +N+V W S+
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT--KNLVCWNSL 460
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + A+E + +F+ + + D ++ S+LSAC +V G+T
Sbjct: 461 MNGFSMHGKAKEVMSIFESLM------------RTRLKPDFISFTSLLSACGQV---GLT 505
Query: 208 EGAHGFVIKRGFDSEVGVGNTL------IDAYARGGHVDVSRKVFDGM-IEKDAVTWNSI 260
+ G+ + E G+ L ++ R G + + + M E D+ W ++
Sbjct: 506 D--EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGAL 563
Query: 261 I 261
+
Sbjct: 564 L 564
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 68/163 (41%), Gaps = 2/163 (1%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
NL+ + + N+ WNS++ + G + E + F S+ + L P +F + +C
Sbjct: 440 NLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC 499
Query: 84 SALHDLHSG-KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
+ G K + +G + S ++++ + G+L +A L E+P + V
Sbjct: 500 GQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCV 559
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
W ++L +N A + ++ E E G N++
Sbjct: 560 -WGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIY 601
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/606 (41%), Positives = 357/606 (58%), Gaps = 39/606 (6%)
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM 117
++A +M + L+ T+ IK C + + H+ F G+ F+ + LI+M
Sbjct: 1 MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
Y K G L +AR LFDE+P R N+VSWT+M++ Y N N L F +L E
Sbjct: 61 YVKFGLLDEARNLFDEMPDR--NVVSWTTMISAY-SNSNLNHKALDFLILMLREG----- 112
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
V + +SVL AC + HG ++K G +S+V V + LID Y++ G
Sbjct: 113 ------VRPNMYTYSSVLRACDGLLN---LRQLHGSILKVGLESDVFVRSALIDTYSKLG 163
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
+ VF+ MI D V WNSII +AQN E L ++ +M K D + TL++VL
Sbjct: 164 EQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRM-KRADFVADQSTLTSVL 222
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM-KEKNV 356
A L +L LG+ +H V+K D + +I+ +++DMYCKCG ++ A F +M EK+V
Sbjct: 223 RACTGLALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDV 280
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW+ MIAG + + +AL LF M G +PNYIT + VL ACSHAGLV +GW++ +
Sbjct: 281 ISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQS 340
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M F I+PG EHYGC++DLLGRAGKL EA LI M + D V W LLGACR+HKNVD
Sbjct: 341 MKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVD 400
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
L AAK++ +L+P + G ++LLSNIYAN+ +WEDV R M+ R + K PG S +E+
Sbjct: 401 LAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVS 460
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
+VHAF++GD HP+ E+I L +L +L +GYV D V+ D++ E+ E +L+ HSE
Sbjct: 461 KQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSE 520
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLR+CGDCH +L+S++ +R IV+RD R+H+F+ G+C
Sbjct: 521 KLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVC 580
Query: 639 SCGDYW 644
SCGDYW
Sbjct: 581 SCGDYW 586
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 125/257 (48%), Gaps = 22/257 (8%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
S+++ K + +FN+ + ++ WNS+I A+ D E L + M++
Sbjct: 153 SALIDTYSKLGEQHDALNVFNEMI-TGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADF 211
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
+ST +++C+ L L G+Q H + + +D+ +++AL+DMY KCG L DA
Sbjct: 212 VADQSTLTSVLRACTGLALLELGRQVH--VHVLKYDQDLILNNALLDMYCKCGSLEDANL 269
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
LF + ++++SW++M+ G QN + +AL LF E + G N +
Sbjct: 270 LFTRMMTE-KDVISWSTMIAGLAQNGFSADALKLF-----EAMKSKGPKPN-------YI 316
Query: 190 AIASVLSACSRVTVNGVTEGAHGF-VIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVF 246
I VL ACS + V +G + F +K F + G + +ID R G +D + K+
Sbjct: 317 TILGVLFACSHAGL--VNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLI 374
Query: 247 DGMI-EKDAVTWNSIIA 262
M E DAVTW ++
Sbjct: 375 HEMNHEPDAVTWRILLG 391
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/631 (39%), Positives = 381/631 (60%), Gaps = 35/631 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+D + SWNS+++ + G EAL+ + MR P I + + + +G
Sbjct: 379 MDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNG 438
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H A G D+ V ++L+DMY+K + +FD++P + ++VSWT+++ G+
Sbjct: 439 MQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDK--DVVSWTTIIAGHA 496
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN + AL LF+E LE + +D + I+S+L ACS + + + H
Sbjct: 497 QNGSHSRALELFREVQLE------------GIDLDVMMISSILLACSGLKLISSVKEIHS 544
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++I++G S++ + N ++D Y G+VD + ++F+ + KD V+W S+I+ Y NGLA E
Sbjct: 545 YIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANE 603
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL++F ++K T V+ ++++L ++L A A L L+ GK IH +I+ + ++++
Sbjct: 604 ALELF-HLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLV 662
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY +CG ++ +R FN ++ K++ WT+MI YGMH R A+DLF +M + P++I
Sbjct: 663 DMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHI 722
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
FV+VL ACSH+GL+ EG +L +M +E+ +EP EHY C+VDLLGRA L+EAY ++G
Sbjct: 723 AFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKG 782
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M+V+ VW +LLGAC+IH N +LGEIAA+KL E++P N G +VL+SN+YA RW+DV
Sbjct: 783 MEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDV 842
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL-QEVGY 571
E R MK L K PG S +E+ KVH F+ DK HPQ +IY L ++ KL +E GY
Sbjct: 843 EEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGY 902
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
V V+H+ +EEK L HSE+LA NLRVCGDCH +L
Sbjct: 903 VAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKL 962
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
ISK +RE+V+RD+ RFH+FK G+CSCGD W
Sbjct: 963 ISKFFERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 156/469 (33%), Positives = 263/469 (56%), Gaps = 30/469 (6%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S+V K + LF++ +K +V SWNS+I+ + G S+EALR F M+K SL
Sbjct: 255 NSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASL 314
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P TF A+++C + G H ++ +VFV++ALI MY++ G++ +A
Sbjct: 315 APNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAAN 374
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F + + +SW SML+G+VQN EAL +F E + G D V
Sbjct: 375 IFYNMDD--WDTISWNSMLSGFVQNGLYHEAL----QFYHEMRDAGQKP--------DLV 420
Query: 190 AIASVLSACSRV--TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
A+ S+++A +R T+NG+ H + +K G DS++ VGN+L+D YA+ + +FD
Sbjct: 421 AVISIIAASARSGNTLNGMQ--IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFD 478
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
M +KD V+W +IIA +AQNG + AL++F + V+ + + + +S++LLA + L ++
Sbjct: 479 KMPDKDVVSWTTIIAGHAQNGSHSRALELFRE-VQLEGIDLDVMMISSILLACSGLKLIS 537
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
K IH +I+ L + +++ I+D+Y +CG VD A + F ++ K+V SWT+MI+ Y
Sbjct: 538 SVKEIHSYIIRKGLSD-LVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYV 596
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+ A EAL+LF+ M + GV P+ I+ VS+LSA + +++G H F I G
Sbjct: 597 HNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEI-----HGFLIRKGF 651
Query: 428 EHYG----CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G +VD+ R G L+++ ++ ++ K D V+W S++ A +H
Sbjct: 652 VLEGSLASTLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMINAYGMH 699
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/442 (29%), Positives = 220/442 (49%), Gaps = 24/442 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+F+WN++I G+ + +L + MR + TFPC +K+C L D G + H
Sbjct: 180 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVH 239
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A G+ VFV+++++ MY+KC +L+ AR+LFD +P++ ++VSW SM++ Y N
Sbjct: 240 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEK-EDVVSWNSMISAYSSNGQ 298
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+ EAL LF E ++ ++ + L AC + H V+K
Sbjct: 299 SIEALRLFGEM------------QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLK 346
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
+ V V N LI YAR G + + +F M + D ++WNS+++ + QNGL EAL
Sbjct: 347 SSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQF 406
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
+ +M + K + V + +++ A A G G IH +K L+ + VG S++DMY
Sbjct: 407 YHEM-RDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYA 465
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
K + F++M +K+V SWT +IAG+ + AL+LF ++ G+ + + S
Sbjct: 466 KFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISS 525
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY---GCMVDLLGRAGKLKEAYDLIEGM 453
+L ACS L+ H + I G+ +VD+ G G + A + E +
Sbjct: 526 ILLACSGLKLISSVKEI-----HSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELI 580
Query: 454 KVKADFVVWGSLLGACRIHKNV 475
+ K D V W S++ +C +H +
Sbjct: 581 EFK-DVVSWTSMI-SCYVHNGL 600
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 201/417 (48%), Gaps = 25/417 (5%)
Query: 60 AFSSMRKLSLTPTRSTFP------CAIKSCSALHDLHSGKQAHQQAFIF-GFHRDVFVSS 112
AF S+ L + S F ++ C + L G+Q H VF+S+
Sbjct: 95 AFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLST 154
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
L+ MY KCG L DA KLFD +P + I +W +M+ YV N +L L++E +
Sbjct: 155 RLVFMYGKCGCLVDAEKLFDGMPH--KTIFTWNAMIGAYVTNGEPLGSLELYREMRV--- 209
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
+ +D+ +L AC + HG IK G+ S V V N+++
Sbjct: 210 ---------SGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGM 260
Query: 233 YARGGHVDVSRKVFDGMIEK-DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
Y + ++ +R++FD M EK D V+WNS+I+ Y+ NG + EAL +F +M K++ + N
Sbjct: 261 YTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKAS-LAPNTY 319
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
T A L A ++ G IH V+K +V V ++I MY + G++ A F M
Sbjct: 320 TFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNM 379
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
+ + SW +M++G+ + EAL +++M AG +P+ + +S+++A + +G G
Sbjct: 380 DDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGM 439
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
++ + ++ ++ +VD+ + +K + + M K D V W +++
Sbjct: 440 Q-IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDK-DVVSWTTIIAG 494
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 265/671 (39%), Positives = 374/671 (55%), Gaps = 64/671 (9%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKL---SLTPTRS---TFPCAIKSCSALHDL 89
++V SWNS+++ + ++ AL FS M + T RS + + +C +L +
Sbjct: 229 DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAV 288
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
K+ H A G DVFV +ALID Y+KCG + +A K+F+ + +++VSW +M+
Sbjct: 289 PQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM--EFKDVVSWNAMVA 346
Query: 150 GYVQNDNAREALLLFKEFLLEESECG--------------GASENSDNVF---------V 186
GY Q+ N A LFK E G S + N+F
Sbjct: 347 GYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLP 406
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKR----------GFDSEVGVGNTLIDAYARG 236
+ V I SVLSAC+ + H + +K G D ++ V N LID Y++
Sbjct: 407 NCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC 466
Query: 237 GHVDVSRKVFDGMI--EKDAVTWNSIIAIYAQNGLAAEALDVFDQMV-KSTDVKCNAVTL 293
+R +FD + E++ VTW +I +AQ G + +AL +F +M+ + V NA T+
Sbjct: 467 RSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTI 526
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEES--VIVGTSIIDMYCKCGQVDLARKAFNQM 351
S +L+A AHL +R+GK IH V++ ES V +IDMY KCG VD AR F+ M
Sbjct: 527 SCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSM 586
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
+K+ SWT+M+ GYGMH R EALD+F KM KAG P+ ITF+ VL ACSH G+V +G
Sbjct: 587 SQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGL 646
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
+ ++M ++ + P EHY C +DLL R+G+L +A+ ++ M ++ VVW +LL ACR+
Sbjct: 647 SYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRV 706
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFS 531
H NV+L E A KL E+ N G + L+SNIYA AGRW+DV R R LMK + K PG S
Sbjct: 707 HSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 766
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTL 591
V+ + +F VGD+ HP +IY LE L +++ +GYV + +HDVD+EEK L
Sbjct: 767 WVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLL 826
Query: 592 RIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF 633
HSEKLA NLRVCGDCH+ ISK+VD EIVVRD RFH+F
Sbjct: 827 VEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHF 886
Query: 634 KDGLCSCGDYW 644
K+G CSCG YW
Sbjct: 887 KNGSCSCGGYW 897
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/501 (30%), Positives = 234/501 (46%), Gaps = 59/501 (11%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
T+ L + V + WN +I + + G A+ M + P T P +K+
Sbjct: 112 TDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKA 171
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR-IRNI 141
C L G H GF +VF+ +AL+ MYS+CG L +A +FDEI QR I ++
Sbjct: 172 CGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDV 231
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
+SW S+++ +V++ NA AL LF + L E N D ++I ++L AC +
Sbjct: 232 ISWNSIVSAHVKSSNAWTALDLFSKMTLI------VHEKPTNERSDIISIVNILPACGSL 285
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM------------ 249
T+ HG I+ G +V VGN LIDAYA+ G ++ + KVF+ M
Sbjct: 286 KAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 345
Query: 250 -----------------------IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
I D VTW ++IA Y+Q G + EAL++F QM+ S +
Sbjct: 346 AGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSL 405
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL----------EESVIVGTSIIDMYC 336
N VT+ +VL A A LG G IH +K L +E ++V ++IDMY
Sbjct: 406 P-NCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 464
Query: 337 KCGQVDLARKAFN--QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA--GVRPNYI 392
KC AR F+ ++E+NV +WT MI G+ + + +AL LF +MI GV PN
Sbjct: 465 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 524
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG-CMVDLLGRAGKLKEAYDLIE 451
T +L AC+H ++ G + E C++D+ + G + A + +
Sbjct: 525 TISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFD 584
Query: 452 GMKVKADFVVWGSLLGACRIH 472
M K+ + W S++ +H
Sbjct: 585 SMSQKSA-ISWTSMMTGYGMH 604
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 124/266 (46%), Gaps = 31/266 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPCAIKSCSALHDLH 90
+++ NV +W +I A+ GDS +AL+ F M + P T C + +C+ L +
Sbjct: 481 LEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIR 540
Query: 91 SGKQAHQQAFIFGFHR----DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
GKQ H A++ HR FV++ LIDMYSKCG++ AR +FD + Q ++ +SWTS
Sbjct: 541 IGKQIH--AYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ--KSAISWTS 596
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+TGY + EAL +F + D + VL ACS + V
Sbjct: 597 MMTGYGMHGRGSEALDIFDKM------------RKAGFVPDDITFLVVLYACSHCGM--V 642
Query: 207 TEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVS-RKVFDGMIEKDAVTWNSIIA 262
+G F G ID AR G +D + R V D +E AV W ++++
Sbjct: 643 DQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLS 702
Query: 263 ---IYAQNGLAAEALDVFDQMVKSTD 285
+++ LA AL+ +M D
Sbjct: 703 ACRVHSNVELAEHALNKLVEMNAEND 728
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 16/278 (5%)
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
F S +G ++ +Y G D + V + + AV WN +I + + G A++V
Sbjct: 92 FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 151
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
+M+++ + + TL VL A L R G H + E +V + +++ MY +C
Sbjct: 152 RMLRA-GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 210
Query: 339 GQVDLARKAFNQMKEK---NVRSWTAMIAGYGMHCRAREALDLFYKMI------KAGVRP 389
G ++ A F+++ ++ +V SW ++++ + A ALDLF KM R
Sbjct: 211 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 270
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ I+ V++L AC V + ++ P V ++D + G ++ A +
Sbjct: 271 DIISIVNILPACGSLKAVPQTKE-VHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKV 329
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
M+ K D V W +++ N + AA +LF+
Sbjct: 330 FNMMEFK-DVVSWNAMVAGYSQSGNFE----AAFELFK 362
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 62/159 (38%), Gaps = 12/159 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + SW S++ G EAL F MRK P TF + +CS H G
Sbjct: 586 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS-----HCG 640
Query: 93 KQAHQQAFIFGFHRDVFVS------SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
++ D ++ + ID+ ++ G L A + ++P +V W +
Sbjct: 641 MVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVV-WVA 699
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
+L+ + N A + + +E G+ N++
Sbjct: 700 LLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIY 738
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/614 (40%), Positives = 363/614 (59%), Gaps = 46/614 (7%)
Query: 53 DSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS 112
D A+ SM + + T+ IK C A + GK+ H+ F G+H F+++
Sbjct: 265 DLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTN 324
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ---NDNAREAL-LLFKEFL 168
LI+MY K L +A+ LFD++P+R N+VSWT+M++ Y ND A L +F+
Sbjct: 325 ILINMYVKFNLLEEAQVLFDKMPER--NVVSWTTMISAYSNAQLNDRAMRLLAFMFR--- 379
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
D V + +SVL AC R+ + H +++K G +S+V V +
Sbjct: 380 -------------DGVMPNMFTFSSVLRACERLYD---LKQLHSWIMKVGLESDVFVRSA 423
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
LID Y++ G + + KVF M+ D+V WNSIIA +AQ+ EAL ++ M +
Sbjct: 424 LIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSM-RRVGFPA 482
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+ TL++VL A L +L LG+ H V+K D + +I+ +++DMYCKCG ++ A+ F
Sbjct: 483 DQSTLTSVLRACTSLSLLELGRQAHVHVLKFD--QDLILNNALLDMYCKCGSLEDAKFIF 540
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
N+M +K+V SW+ MIAG + + EAL+LF M G +PN+IT + VL ACSHAGLV
Sbjct: 541 NRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVN 600
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
EGW++ +M + + I+PG EHYGCM+DLLGRA KL + LI M + D V W +LL A
Sbjct: 601 EGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDA 660
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
CR +NVDL AAK++ +L+P + G +VLLSNIYA + RW DV R MK R + K P
Sbjct: 661 CRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEP 720
Query: 529 GFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKE 588
G S +E+ ++HAF++GDK HPQ ++I L + +L GYV D V+ D++ E++E
Sbjct: 721 GCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQRE 780
Query: 589 MTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRF 630
+LR HSEKLA NL++CGDCH +LI+++ R IV+RD R+
Sbjct: 781 DSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRY 840
Query: 631 HYFKDGLCSCGDYW 644
H+F+DG+CSCGDYW
Sbjct: 841 HHFQDGVCSCGDYW 854
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 187/353 (52%), Gaps = 27/353 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K ++N V SW ++I+ + + A+R + M + + P TF +++C L+
Sbjct: 342 LFDKMPERN-VVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLY 400
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL KQ H G DVFV SALID+YSK GEL +A K+F E+ + V W S+
Sbjct: 401 DL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREM--MTGDSVVWNSI 455
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ + Q+ + EAL L+K G ++ S + SVL AC+ +++ +
Sbjct: 456 IAAFAQHSDGDEALHLYKSM----RRVGFPADQS--------TLTSVLRACTSLSLLELG 503
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
AH V+K FD ++ + N L+D Y + G ++ ++ +F+ M +KD ++W+++IA AQN
Sbjct: 504 RQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQN 561
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVI 326
G + EAL++F+ M K K N +T+ VL A +H G++ G + + ++
Sbjct: 562 GFSMEALNLFESM-KVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGRE 620
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
++D+ + ++D K ++M E +V +W ++ CRAR+ +DL
Sbjct: 621 HYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDA----CRARQNVDL 669
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 265/671 (39%), Positives = 374/671 (55%), Gaps = 64/671 (9%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKL---SLTPTRS---TFPCAIKSCSALHDL 89
++V SWNS+++ + ++ AL FS M + T RS + + +C +L +
Sbjct: 222 DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAV 281
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
K+ H A G DVFV +ALID Y+KCG + +A K+F+ + +++VSW +M+
Sbjct: 282 PQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM--EFKDVVSWNAMVA 339
Query: 150 GYVQNDNAREALLLFKEFLLEESECG--------------GASENSDNVF---------V 186
GY Q+ N A LFK E G S + N+F
Sbjct: 340 GYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLP 399
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKR----------GFDSEVGVGNTLIDAYARG 236
+ V I SVLSAC+ + H + +K G D ++ V N LID Y++
Sbjct: 400 NCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC 459
Query: 237 GHVDVSRKVFDGMI--EKDAVTWNSIIAIYAQNGLAAEALDVFDQMV-KSTDVKCNAVTL 293
+R +FD + E++ VTW +I +AQ G + +AL +F +M+ + V NA T+
Sbjct: 460 RSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTI 519
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEES--VIVGTSIIDMYCKCGQVDLARKAFNQM 351
S +L+A AHL +R+GK IH V++ ES V +IDMY KCG VD AR F+ M
Sbjct: 520 SCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSM 579
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
+K+ SWT+M+ GYGMH R EALD+F KM KAG P+ ITF+ VL ACSH G+V +G
Sbjct: 580 SQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGL 639
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
+ ++M ++ + P EHY C +DLL R+G+L +A+ ++ M ++ VVW +LL ACR+
Sbjct: 640 SYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRV 699
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFS 531
H NV+L E A KL E+ N G + L+SNIYA AGRW+DV R R LMK + K PG S
Sbjct: 700 HSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 759
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTL 591
V+ + +F VGD+ HP +IY LE L +++ +GYV + +HDVD+EEK L
Sbjct: 760 WVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLL 819
Query: 592 RIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF 633
HSEKLA NLRVCGDCH+ ISK+VD EIVVRD RFH+F
Sbjct: 820 VEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHF 879
Query: 634 KDGLCSCGDYW 644
K+G CSCG YW
Sbjct: 880 KNGSCSCGGYW 890
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/501 (30%), Positives = 234/501 (46%), Gaps = 59/501 (11%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
T+ L + V + WN +I + + G A+ M + P T P +K+
Sbjct: 105 TDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKA 164
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR-IRNI 141
C L G H GF +VF+ +AL+ MYS+CG L +A +FDEI QR I ++
Sbjct: 165 CGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDV 224
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
+SW S+++ +V++ NA AL LF + L E N D ++I ++L AC +
Sbjct: 225 ISWNSIVSAHVKSSNAWTALDLFSKMTLI------VHEKPTNERSDIISIVNILPACGSL 278
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM------------ 249
T+ HG I+ G +V VGN LIDAYA+ G ++ + KVF+ M
Sbjct: 279 KAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 338
Query: 250 -----------------------IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
I D VTW ++IA Y+Q G + EAL++F QM+ S +
Sbjct: 339 AGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSL 398
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL----------EESVIVGTSIIDMYC 336
N VT+ +VL A A LG G IH +K L +E ++V ++IDMY
Sbjct: 399 P-NCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 457
Query: 337 KCGQVDLARKAFN--QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA--GVRPNYI 392
KC AR F+ ++E+NV +WT MI G+ + + +AL LF +MI GV PN
Sbjct: 458 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 517
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG-CMVDLLGRAGKLKEAYDLIE 451
T +L AC+H ++ G + E C++D+ + G + A + +
Sbjct: 518 TISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFD 577
Query: 452 GMKVKADFVVWGSLLGACRIH 472
M K+ + W S++ +H
Sbjct: 578 SMSQKSA-ISWTSMMTGYGMH 597
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 124/266 (46%), Gaps = 31/266 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPCAIKSCSALHDLH 90
+++ NV +W +I A+ GDS +AL+ F M + P T C + +C+ L +
Sbjct: 474 LEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIR 533
Query: 91 SGKQAHQQAFIFGFHR----DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
GKQ H A++ HR FV++ LIDMYSKCG++ AR +FD + Q ++ +SWTS
Sbjct: 534 IGKQIH--AYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ--KSAISWTS 589
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+TGY + EAL +F + D + VL ACS + V
Sbjct: 590 MMTGYGMHGRGSEALDIFDKM------------RKAGFVPDDITFLVVLYACSHCGM--V 635
Query: 207 TEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVS-RKVFDGMIEKDAVTWNSIIA 262
+G F G ID AR G +D + R V D +E AV W ++++
Sbjct: 636 DQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLS 695
Query: 263 ---IYAQNGLAAEALDVFDQMVKSTD 285
+++ LA AL+ +M D
Sbjct: 696 ACRVHSNVELAEHALNKLVEMNAEND 721
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 16/278 (5%)
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
F S +G ++ +Y G D + V + + AV WN +I + + G A++V
Sbjct: 85 FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 144
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
+M+++ + + TL VL A L R G H + E +V + +++ MY +C
Sbjct: 145 RMLRA-GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 203
Query: 339 GQVDLARKAFNQMKEK---NVRSWTAMIAGYGMHCRAREALDLFYKMI------KAGVRP 389
G ++ A F+++ ++ +V SW ++++ + A ALDLF KM R
Sbjct: 204 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 263
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ I+ V++L AC V + ++ P V ++D + G ++ A +
Sbjct: 264 DIISIVNILPACGSLKAVPQTKE-VHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKV 322
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
M+ K D V W +++ N + AA +LF+
Sbjct: 323 FNMMEFK-DVVSWNAMVAGYSQSGNFE----AAFELFK 355
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 62/159 (38%), Gaps = 12/159 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + SW S++ G EAL F MRK P TF + +CS H G
Sbjct: 579 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS-----HCG 633
Query: 93 KQAHQQAFIFGFHRDVFVS------SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
++ D ++ + ID+ ++ G L A + ++P +V W +
Sbjct: 634 MVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVV-WVA 692
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
+L+ + N A + + +E G+ N++
Sbjct: 693 LLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIY 731
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/671 (36%), Positives = 391/671 (58%), Gaps = 70/671 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSAL 86
+F +++N V S+N+++A + G + EAL + M+ + + P + TF + C+
Sbjct: 434 VFRSLLERNEV-SYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQ 492
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ + G+Q H +++ V + L+ MYS+CG L+ A+++F+ + +R N SW S
Sbjct: 493 RNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAER--NAYSWNS 550
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ GY QN +EAL LFK+ L + + D +++S+LS+C ++ +
Sbjct: 551 MIEGYQQNGETQEALRLFKQMQL------------NGIKPDCFSLSSMLSSCVSLSDSQK 598
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT---------- 256
H F+++ + E + L+D YA+ G +D + KV+D I+KD +
Sbjct: 599 GRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVN 658
Query: 257 ---------------------WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
WNSI+A YA GL E+ + F +M++S D++ + +T+
Sbjct: 659 SGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLES-DIEYDVLTMVT 717
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEE-SVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
++ + L L G +H +IK SV++ T+++DMY KCG + AR F+ M K
Sbjct: 718 IVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGK 777
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
N+ SW AMI+GY H ++EAL L+ +M K G+ PN +TF+++LSACSH GLV+EG
Sbjct: 778 NIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIF 837
Query: 415 NTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
+M ++NIE EHY CMVDLLGRAG+L++A + +E M ++ + WG+LLGACR+HK+
Sbjct: 838 TSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKD 897
Query: 475 VDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVE 534
+D+G +AA++LFEL+P N G +V++SNIYA AGRW++VE R +MK + + K PG S +E
Sbjct: 898 MDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIE 957
Query: 535 LRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIH---DVDQEEKEMTL 591
+ ++ F G K HP+ E+IY L L ++ + +GY+ D + ++ D+ +EE+E L
Sbjct: 958 INSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYL 1017
Query: 592 RIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF 633
HSE+LA NLR+CGDCHT + ISK+ R I+ RD+ RFH+F
Sbjct: 1018 LQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHF 1077
Query: 634 KDGLCSCGDYW 644
++G CSCGDYW
Sbjct: 1078 ENGKCSCGDYW 1088
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 253/481 (52%), Gaps = 31/481 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++ +V +WN+VIA + EA F M K+ + P TF A++ C AL G
Sbjct: 236 IEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGG 295
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H + GF D FV +ALIDMY+KC + K+FDE+ +R N V+W S+++
Sbjct: 296 KQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER--NQVTWNSIISAEA 353
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q + +AL+LF ++ES G N N + S+L A + + G HG
Sbjct: 354 QFGHFNDALVLF--LRMQES---GYKSNRFN-------LGSILMASAGLADIGKGRELHG 401
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+++ +S++ +G+ L+D Y++ G V+ + +VF ++E++ V++N+++A Y Q G A E
Sbjct: 402 HLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEE 461
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL+++ M ++ + T + +L A+ G+ IH +I+ ++ +++IV T ++
Sbjct: 462 ALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELV 521
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
MY +CG+++ A++ FN+M E+N SW +MI GY + +EAL LF +M G++P+
Sbjct: 522 HMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCF 581
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG----CMVDLLGRAGKLKEAYD 448
+ S+LS+C Q+G H F + +E G +VD+ + G + A+
Sbjct: 582 SLSSMLSSCVSLSDSQKGREL-----HNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWK 636
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA-AKKLF-ELEPNNCGYHVLLSNIYANA 506
+ + +K D ++ ++ A V+ G AK LF ++E N + YAN
Sbjct: 637 VYD-QTIKKDVILNNVMVSAF-----VNSGRANDAKNLFDQMEQRNTALWNSILAGYANK 690
Query: 507 G 507
G
Sbjct: 691 G 691
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/471 (30%), Positives = 233/471 (49%), Gaps = 49/471 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ +WN++I AR D +E LR + MR + TFP IK+C A+ D+
Sbjct: 135 MPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGV 194
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q G + ++FV AL+D Y++ G + DA DEI ++V+W +++ GYV
Sbjct: 195 RQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEG--TSVVTWNAVIAGYV 252
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ + EA +F L V D+ AS L C + + H
Sbjct: 253 KILSWEEAWGIFDRML------------KIGVCPDNFTFASALRVCGALRSRDGGKQVHS 300
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+I GF + VGN LID YA+ + KVFD M E++ VTWNSII+ AQ G +
Sbjct: 301 KLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFND 360
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL +F +M +S K N L ++L+A A L + G+ +H +++ L +I+G++++
Sbjct: 361 ALVLFLRMQES-GYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALV 419
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM-IKAGVRPNY 391
DMY KCG V+ A + F + E+N S+ A++AGY +A EAL+L++ M + G++P+
Sbjct: 420 DMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQ 479
Query: 392 ITFVSVLSACS-----------HAGLVQ-----------EGWHW------LNTMGHEFN- 422
TF ++L+ C+ HA L++ E H LN FN
Sbjct: 480 FTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNR 539
Query: 423 -IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK---VKADFVVWGSLLGAC 469
E + M++ + G+ +EA L + M+ +K D S+L +C
Sbjct: 540 MAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 590
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 188/404 (46%), Gaps = 34/404 (8%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD---ARKLF 131
+ I+ C + GK H Q G++ D ++ + ++ +Y++ G L D ARKLF
Sbjct: 73 PYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLF 132
Query: 132 DEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAI 191
+E+P+ RN+ +W +M+ Y + D+ E L L+ G S N F D
Sbjct: 133 EEMPE--RNLTAWNTMILAYARVDDYMEVLRLY-----------GRMRGSGN-FSDKFTF 178
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
SV+ AC + G V+K G + + VG L+D YAR G +D + D +
Sbjct: 179 PSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEG 238
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
VTWN++IA Y + EA +FD+M+K V + T ++ L L GK
Sbjct: 239 TSVVTWNAVIAGYVKILSWEEAWGIFDRMLK-IGVCPDNFTFASALRVCGALRSRDGGKQ 297
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
+H ++I + VG ++IDMY KC + K F++M E+N +W ++I+
Sbjct: 298 VHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGH 357
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN-------IE 424
+AL LF +M ++G + N S+L A AGL G G E + +
Sbjct: 358 FNDALVLFLRMQESGYKSNRFNLGSILMAS--AGLADIG------KGRELHGHLVRNLLN 409
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ +VD+ + G ++EA+ + + ++ + V + +LL
Sbjct: 410 SDIILGSALVDMYSKCGMVEEAHQVFRSL-LERNEVSYNALLAG 452
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 120/241 (49%), Gaps = 22/241 (9%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
LF++ +N WNS++A A G E+ F M + + T + CS+L
Sbjct: 667 NLFDQMEQRNTAL-WNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSL 725
Query: 87 HDLHSGKQAHQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L G Q H GF + V + +AL+DMYSKCG ++ AR +FD + +NIVSW
Sbjct: 726 PALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNG--KNIVSWN 783
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M++GY ++ ++EAL+L++E ++ + V ++LSACS +
Sbjct: 784 AMISGYSKHGCSKEALILYEEM------------PKKGMYPNEVTFLAILSACSHTGL-- 829
Query: 206 VTEGAHGFV-IKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
V EG F ++ ++ E + ++D R G ++ +++ + M IE + TW +++
Sbjct: 830 VEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 889
Query: 262 A 262
Sbjct: 890 G 890
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+++V K T T+F+ ++ N+ SWN++I+ ++ G S EAL + M K +
Sbjct: 752 TALVDMYSKCGAITKARTVFDN-MNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGM 810
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVS------SALIDMYSKCGE 123
P TF + +CS H+G D + + ++D+ + G
Sbjct: 811 YPNEVTFLAILSACS-----HTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGR 865
Query: 124 LSDARKLFDEIPQRIRNIVSWTSML 148
L DA++ +++P + +W ++L
Sbjct: 866 LEDAKEFVEKMPIE-PEVSTWGALL 889
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/654 (38%), Positives = 385/654 (58%), Gaps = 38/654 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S+V+ K ++ +F+ ++N V SWNS+IA G +EA F MR +
Sbjct: 232 NSMVNMYSKSLMVSDAKAVFDSMENRNAV-SWNSMIAGFVTNGLDLEAFELFYRMRLEGV 290
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
T++ F IK C+ + ++ KQ H Q G D+ + +AL+ YSKC E+ DA K
Sbjct: 291 KLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFK 350
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
LF + ++N+VSWT++++GYVQN A+ LF + E V +
Sbjct: 351 LFCMM-HGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRRE------------GVRPNHF 397
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
+++L+A + V+ + + H V+K +++ VG L D+Y++ G + + K+F+ +
Sbjct: 398 TYSTILTANAAVSPSQI----HALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELI 453
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA-IAHLGVLRL 308
EKD V W+++++ YAQ G A+ +F Q+ K V+ N T S+VL A A +
Sbjct: 454 DEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKE-GVEPNEFTFSSVLNACAAPTASVEQ 512
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK H IK ++ V ++++ MY K G ++ A + F + ++++ SW +MI+GY
Sbjct: 513 GKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQ 572
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H +++L +F +M + + ITF+ V+SAC+HAGLV EG + + M +++I P +E
Sbjct: 573 HGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTME 632
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HY CMVDL RAG L++A DLI M A +W +LL ACR+H NV LGE+AA+KL L
Sbjct: 633 HYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISL 692
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
+P + +VLLSNIYA AG W++ + R LM +++ K G+S +E++ K +F+ GD
Sbjct: 693 QPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLS 752
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
HPQ ++IY LEEL+++L++ GY D V+HDV++E KE+ L HSE+LA
Sbjct: 753 HPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATP 812
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCHTVI+LISK+ R+IVVRDS RFH+FK G CSCGDYW
Sbjct: 813 PGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 153/471 (32%), Positives = 243/471 (51%), Gaps = 42/471 (8%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTR-STFPCAIKSCSALHDLHSGKQAHQQAF 100
N ++ + +R + EAL F +R+ S +PT S+ C +K C L D GKQ H Q
Sbjct: 61 NHLLFEFSRNDQNKEALNLFLGLRR-SGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCI 119
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
GF DV V ++L+DMY K + D ++FDE+ R++N+VSWTS+L GY QN +A
Sbjct: 120 KCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM--RVKNVVSWTSLLAGYRQNGLNEQA 177
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA---HGFVIKR 217
L LF + LE + + A+VL + +G E H VIK
Sbjct: 178 LKLFSQMQLE------------GIKPNPFTFAAVLGG---LAADGAVEKGVQVHTMVIKS 222
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
G DS + VGN++++ Y++ V ++ VFD M ++AV+WNS+IA + NGL EA ++F
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELF 282
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
+M + VK + V+ A++ + K +H QVIK + + + T+++ Y K
Sbjct: 283 YRM-RLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341
Query: 338 CGQVDLARKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
C ++D A K F M +NV SWTA+I+GY + R A++LF +M + GVRPN+ T+ +
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYST 401
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+L+A +A + H L + + P V + D + G EA + E + K
Sbjct: 402 ILTA--NAAVSPSQIHAL-VVKTNYENSPSVG--TALSDSYSKIGDANEAAKIFELIDEK 456
Query: 457 ADFVVWGSLLGACRIHKNVDLGEI-AAKKLF------ELEPNNCGYHVLLS 500
D V W ++L +G+I A K+F +EPN + +L+
Sbjct: 457 -DIVAWSAMLSG-----YAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLN 501
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 230/463 (49%), Gaps = 35/463 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
NV SW S++A + G + +AL+ FS M+ + P TF + +A + G Q H
Sbjct: 157 NVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVH 216
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G +FV +++++MYSK +SDA+ +FD + RN VSW SM+ G+V N
Sbjct: 217 TMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMEN--RNAVSWNSMIAGFVTNGL 274
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EA LF LE V + A+V+ C+ + + H VIK
Sbjct: 275 DLEAFELFYRMRLE------------GVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIK 322
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWNSIIAIYAQNGLAAEALD 275
G D ++ + L+ AY++ +D + K+F M ++ V+W +II+ Y QNG A++
Sbjct: 323 NGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMN 382
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F QM + V+ N T S +L A A + + IH V+K + E S VGT++ D Y
Sbjct: 383 LFCQM-RREGVRPNHFTYSTILTANAAVSPSQ----IHALVVKTNYENSPSVGTALSDSY 437
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
K G + A K F + EK++ +W+AM++GY A+ +F ++ K GV PN TF
Sbjct: 438 SKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFS 497
Query: 396 SVLSAC-SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC----MVDLLGRAGKLKEAYDLI 450
SVL+AC + V++G + H +I+ G + C +V + + G ++ A ++
Sbjct: 498 SVLNACAAPTASVEQGKQF-----HSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVF 552
Query: 451 EGMKVKADFVVWGSLLGACRIH----KNVDLGEIAAKKLFELE 489
+ +V D V W S++ H K++ + E K EL+
Sbjct: 553 K-RQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELD 594
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 146/277 (52%), Gaps = 15/277 (5%)
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
+++LFDE PQ+ + +L + +ND +EAL LF S G+S
Sbjct: 45 SQQLFDETPQQ--GLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSS-------- 94
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
++ VL C + V + H IK GF +V VG +L+D Y + V+ +VF
Sbjct: 95 ----LSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVF 150
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D M K+ V+W S++A Y QNGL +AL +F QM + +K N T +AVL +A G +
Sbjct: 151 DEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQM-QLEGIKPNPFTFAAVLGGLAADGAV 209
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
G +H VIK L+ ++ VG S+++MY K V A+ F+ M+ +N SW +MIAG+
Sbjct: 210 EKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGF 269
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
+ EA +LFY+M GV+ F +V+ C++
Sbjct: 270 VTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCAN 306
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 123/227 (54%), Gaps = 3/227 (1%)
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
S+++FD ++ N ++ +++N EAL++F + +S + +LS VL
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGS-PTDGSSLSCVLKVCG 103
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
L +GK +H Q IK E V VGTS++DMY K V+ + F++M+ KNV SWT+
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
++AGY + +AL LF +M G++PN TF +VL + G V++G ++TM +
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQ-VHTMVIKS 222
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
++ + MV++ ++ + +A + + M+ + + V W S++
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENR-NAVSWNSMIAG 268
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/612 (39%), Positives = 373/612 (60%), Gaps = 42/612 (6%)
Query: 53 DSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS 112
D A++A S++ L +T+ IK C + +H G + + G +F+ +
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
LI+MY K L+DA +LFD++PQR N++SWT+M++ Y + ++AL L L
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQR--NVISWTTMISAYSKCKIHQKALELLVLML---- 154
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE--GAHGFVIKRGFDSEVGVGNTLI 230
DNV + +SVL +C NG+++ H +IK G +S+V V + LI
Sbjct: 155 --------RDNVRPNVYTYSSVLRSC-----NGMSDVRMLHCGIIKEGLESDVFVRSALI 201
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
D +A+ G + + VFD M+ DA+ WNSII +AQN + AL++F +M ++ + A
Sbjct: 202 DVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA 261
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
TL++VL A L +L LG H ++K D + +I+ +++DMYCKCG ++ A + FNQ
Sbjct: 262 -TLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQ 318
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
MKE++V +W+ MI+G + ++EAL LF +M +G +PNYIT V VL ACSHAGL+++G
Sbjct: 319 MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
W++ +M + I+P EHYGCM+DLLG+AGKL +A L+ M+ + D V W +LLGACR
Sbjct: 379 WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACR 438
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
+ +N+ L E AAKK+ L+P + G + LLSNIYAN+ +W+ VE R+ M++R + K PG
Sbjct: 439 VQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGC 498
Query: 531 SLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMT 590
S +E+ ++HAF++GD HPQ ++ + L +L +L +GYV + V+ D++ E+ E +
Sbjct: 499 SWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDS 558
Query: 591 LRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHY 632
LR HSEKLA NLR+CGDCH +L SK+ R IV+R R+H+
Sbjct: 559 LRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHH 618
Query: 633 FKDGLCSCGDYW 644
F+DG CSCGDYW
Sbjct: 619 FQDGKCSCGDYW 630
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 131/257 (50%), Gaps = 23/257 (8%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
S+++ K + ++F++ V + + WNS+I A+ S AL F M++
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEMVTGDAIV-WNSIIGGFAQNSRSDVALELFKRMKRAGF 256
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
++T +++C+ L L G QAH I + +D+ +++AL+DMY KCG L DA +
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAH--VHIVKYDQDLILNNALVDMYCKCGSLEDALR 314
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F+++ + R++++W++M++G QN ++EAL LF E + G N +
Sbjct: 315 VFNQMKE--RDVITWSTMISGLAQNGYSQEALKLF-----ERMKSSGTKPN-------YI 360
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
I VL ACS + + +G + F + G D +ID + G +D + K+
Sbjct: 361 TIVGVLFACSHAGL--LEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLL 418
Query: 247 DGM-IEKDAVTWNSIIA 262
+ M E DAVTW +++
Sbjct: 419 NEMECEPDAVTWRTLLG 435
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 3/182 (1%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ + + +V +W+++I+ LA+ G S EAL+ F M+ P T + +CS
Sbjct: 315 VFNQ-MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAG 373
Query: 88 DLHSG-KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G ++G +ID+ K G+L DA KL +E+ + V+W +
Sbjct: 374 LLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE-PDAVTWRT 432
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+L N A K+ + + E G N++ +S SV +R+ G+
Sbjct: 433 LLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
Query: 207 TE 208
+
Sbjct: 493 KK 494
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/607 (40%), Positives = 349/607 (57%), Gaps = 46/607 (7%)
Query: 56 EALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALI 115
++ + F+ M+ + P + T+P +K+C+ L G+Q H Q GF +V+VSS LI
Sbjct: 421 KSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLI 480
Query: 116 DMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG 175
DMY+K G+L A K+F + + ++VSWT+M+ GY Q+D EAL LFKE
Sbjct: 481 DMYAKHGKLDHALKIFRRLKEN--DVVSWTAMIAGYTQHDKFTEALNLFKEM-------- 530
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
+ D++ AS +SAC+ + H G+ ++ +GN L+ YAR
Sbjct: 531 ----QDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYAR 586
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
G V + FD + KD V+WNS+++ +AQ+G EAL++F QM K+ ++ N+ T +
Sbjct: 587 CGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKA-GLEINSFTFGS 645
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
+ A A++ +R+GK IH + K + V ++I +Y KCG +D
Sbjct: 646 AVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDDI----------- 694
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
SW +MI GY H EAL LF M + V PN++TFV VLSACSH GLV EG +
Sbjct: 695 --SWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFR 752
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
+M N+ P EHY C+VDLLGR+G L A +E M ++ D +VW +LL AC +HKN+
Sbjct: 753 SMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNI 812
Query: 476 DLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVEL 535
D+GE AA L ELEP + +VL+SN+YA +G+W+ +RTR +MK+R + K PG S VE+
Sbjct: 813 DIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEV 872
Query: 536 RGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHS 595
VHAF GD+ HP+ + IYEYL L+ + E GYV S++ D + +K+ T IHS
Sbjct: 873 DNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHS 932
Query: 596 EKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGL 637
E+LA NLRVC DCH I+ +SK+ DR I+VRDS RFH+FK G
Sbjct: 933 ERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGS 992
Query: 638 CSCGDYW 644
CSC DYW
Sbjct: 993 CSCKDYW 999
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 132/430 (30%), Positives = 209/430 (48%), Gaps = 52/430 (12%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SW ++I+ L++ G EA+ F + + +C+ + GKQ H
Sbjct: 232 SWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLV 277
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
GF + +V +AL+ +YS+ G LS A ++F + QR R VS+ S+++G Q
Sbjct: 278 LKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDR--VSYNSLISGLAQQGYINR 335
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
AL LFK+ N D D V +AS+LSAC+ V + H + IK G
Sbjct: 336 ALALFKKM------------NLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGM 383
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
S++ V +L+D Y + + + + F Y Q ++ +F Q
Sbjct: 384 TSDIVVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQ 428
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M + + N T ++L LG LG+ IH QV+K + +V V + +IDMY K G
Sbjct: 429 M-QIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHG 487
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
++D A K F ++KE +V SWTAMIAGY H + EAL+LF +M G++ + I F S +S
Sbjct: 488 KLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAIS 547
Query: 400 ACSHAGLVQEG--WHWLNTM-GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
AC+ + +G H + + G+ ++ G +V L R GK++EAY + + K
Sbjct: 548 ACAGIQALDQGRQIHAQSCLSGYSDDLSIG----NALVSLYARCGKVREAYAAFDQIYAK 603
Query: 457 ADFVVWGSLL 466
D V W SL+
Sbjct: 604 -DNVSWNSLV 612
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 181/383 (47%), Gaps = 52/383 (13%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H + GF F+ + LID+Y K G LS A+K+F+ + + R+ VSW +M++G
Sbjct: 184 EQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENL--KARDSVSWVAMISGLS 241
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN EA+LLF + VLSAC++V + HG
Sbjct: 242 QNGYEEEAMLLFCQI--------------------------VLSACTKVEFFEFGKQLHG 275
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V+K+GF SE V N L+ Y+R G++ + ++F M ++D V++NS+I+ AQ G
Sbjct: 276 LVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINR 335
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL +F +M K + VT++++L A A +G L GK H IK + ++V S++
Sbjct: 336 ALALFKKMNLDCQ-KPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLL 394
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
D+Y KC + A + F YG ++ +F +M G+ PN
Sbjct: 395 DLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEGIVPNQF 439
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTM---GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
T+ S+L C+ G G + G +FN+ ++D+ + GKL A +
Sbjct: 440 TYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVS----SVLIDMYAKHGKLDHALKI 495
Query: 450 IEGMKVKADFVVWGSLLGACRIH 472
+K + D V W +++ H
Sbjct: 496 FRRLK-ENDVVSWTAMIAGYTQH 517
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 180/364 (49%), Gaps = 32/364 (8%)
Query: 9 VSSVVSNV-DKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
VSSV+ ++ KH + +F + + +N+V SW ++IA + EAL F M+
Sbjct: 475 VSSVLIDMYAKHGKLDHALKIFRR-LKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQ 533
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
+ F AI +C+ + L G+Q H Q+ + G+ D+ + +AL+ +Y++CG++ +A
Sbjct: 534 GIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREA 593
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
FD+I ++ VSW S+++G+ Q+ EAL +F A N + ++
Sbjct: 594 YAAFDQI--YAKDNVSWNSLVSGFAQSGYFEEALNIF------------AQMNKAGLEIN 639
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
S S +SA + + + + HG + K G+DSE V N LI YA+ G +
Sbjct: 640 SFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI-------- 691
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
D ++WNS+I Y+Q+G EAL +F+ M K DV N VT VL A +H+G++
Sbjct: 692 -----DDISWNSMITGYSQHGCGFEALKLFEDM-KQLDVLPNHVTFVGVLSACSHVGLVD 745
Query: 308 LGKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAG 365
G + + +L ++D+ + G + A++ +M + + W +++
Sbjct: 746 EGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSA 805
Query: 366 YGMH 369
+H
Sbjct: 806 CNVH 809
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 126/528 (23%), Positives = 227/528 (42%), Gaps = 81/528 (15%)
Query: 92 GKQAHQQAFIFGFH-----RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
G +A+ Q F++ R + LID Y G+L+ A +FDE+P IR++ W
Sbjct: 76 GVRANSQTFLWLLEGCLNSRSFYDGLKLIDFYLAFGDLNCAVNVFDEMP--IRSLSCWNR 133
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN-G 205
+ ++ LF+ L + NV D A VL CS V+
Sbjct: 134 IFNTFIAERLMGRVPGLFRRML------------TKNVEFDERIFAVVLRGCSGNAVSFR 181
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
E H I GF+S + N LID Y + G + ++KVF+ + +D+V+W ++I+ +
Sbjct: 182 FVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLS 241
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QNG EA+ +F Q+V S C V GK +H V+K
Sbjct: 242 QNGYEEEAMLLFCQIVLSA---CTKVEF------------FEFGKQLHGLVLKQGFSSET 286
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V +++ +Y + G + A + F+ M +++ S+ ++I+G AL LF KM
Sbjct: 287 YVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLD 346
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDL----- 436
+P+ +T S+LSAC+ G + G + H + I+ G+ G ++DL
Sbjct: 347 CQKPDCVTVASLLSACASVGALPNGKQF-----HSYAIKAGMTSDIVVEGSLLDLYVKCS 401
Query: 437 -----------LGRAGKLKEAYDLIEGMKVK---ADFVVWGSLLGACRIHKNVDLGE-IA 481
G+ L +++ + M+++ + + S+L C DLGE I
Sbjct: 402 DIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIH 461
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
+ L N +L ++YA G+ + +L RRL + S A
Sbjct: 462 TQVLKTGFQFNVYVSSVLIDMYAKHGKLD-----HALKIFRRLKENDVVSWT-------A 509
Query: 542 FLVGDKEHPQHEK---IYEYLEELNVKLQEVGYVTDMTSV--IHDVDQ 584
+ G +H + + +++ +++ +K +G+ + +++ I +DQ
Sbjct: 510 MIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQ 557
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/630 (38%), Positives = 371/630 (58%), Gaps = 33/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ N+ WN ++ + + ++ F M+ + P + T+P +++C++L L+ G
Sbjct: 423 TETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 482
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H GF +V+V S LIDMY+K G+L+ A ++ +P+ ++VSWT+M+ GYV
Sbjct: 483 EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPED--DVVSWTAMIAGYV 540
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+D EAL LF EE E G + D++ AS +SAC+ + + H
Sbjct: 541 QHDMFSEALQLF-----EEMEYRG-------IQFDNIGFASAISACAGIRALRQGQQIHA 588
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
GF +++ + N LI YAR G + + F+ + +K+ ++WNS+++ AQ+G E
Sbjct: 589 QSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEE 648
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL VF +M++ T+ + N T + + A A L ++ G+ IH V+K + V S+I
Sbjct: 649 ALQVFVRMLR-TEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLI 707
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+Y K G + A + FN M E+NV SW AMI GY H EAL LF +M G+ PN++
Sbjct: 708 SLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHV 767
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TFV VLSACSH GLV+EG + +M ++ P EHY C+VDLLGRAG+L A + I+
Sbjct: 768 TFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKE 827
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M + AD ++W +LL AC IHKN+++GE AA L ELEP + +VL+SNIYA + +W
Sbjct: 828 MPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHR 887
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+ +R LMK+R + K PG S +E++ VHAF GDK HP +IYEY+ LN + E+GYV
Sbjct: 888 DWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYV 947
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D S++++ +Q +K+ +HSEKLA NLRVC DCH I+ +
Sbjct: 948 QDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYV 1007
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+ +R I+VRD+ RFH+F G+CSC D+W
Sbjct: 1008 SKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 236/465 (50%), Gaps = 27/465 (5%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
+ S+V N +H +F++ +++ VFSWN +I + + F M
Sbjct: 96 IDSLVDNYFRHGDQHGAVKVFDENSNRS-VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEG 154
Query: 69 LTPTRSTFPCAIKSCSALH-DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
+TP TF +K+C + KQ H + F +GF V++ LID+YSK G + A
Sbjct: 155 ITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
+K+F+ I +++IV+W +M++G QN EA+LLF + ++ +F
Sbjct: 215 KKVFNCIC--MKDIVTWVAMISGLSQNGLEEEAILLFCDM------------HASEIFPT 260
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
++SVLSA +++ + + E H VIK GF SE V N L+ Y+R + + ++F
Sbjct: 261 PYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFS 320
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
M +D V++NS+I+ Q G + AL++F +M + +K + +T++++L A A +G L
Sbjct: 321 TMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC-LKPDCITVASLLSACASVGALH 379
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
G +H IK + +I+ S++D+Y KC V+ A K F + +N+ W M+ YG
Sbjct: 380 KGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYG 439
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
++ ++F +M G+ PN T+ S+L C+ G + +L H I+ G
Sbjct: 440 QLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGAL-----YLGEQIHTHVIKTGF 494
Query: 428 EH--YGC--MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ Y C ++D+ + G+L A ++ + + D V W +++
Sbjct: 495 QLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAG 538
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 196/401 (48%), Gaps = 22/401 (5%)
Query: 103 GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
GF + + +L+D Y + G+ A K+FDE R++ SW M+ +V + +
Sbjct: 88 GFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSN--RSVFSWNKMIHVFVAQKSNFQVFC 145
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC--SRVTVNGVTEGAHGFVIKRGFD 220
LF+ L E G + N A VL AC + N V + H GFD
Sbjct: 146 LFRRMLAE-----GITPN-------GYTFAGVLKACVGGDIAFNYVKQ-VHSRTFYYGFD 192
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
S V N LID Y++ G+++ ++KVF+ + KD VTW ++I+ +QNGL EA+ +F M
Sbjct: 193 SSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDM 252
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
++++ LS+VL A + + LG+ +H VIK V ++ +Y + +
Sbjct: 253 -HASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRK 311
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+ A + F+ M ++ S+ ++I+G + AL+LF KM + ++P+ IT S+LSA
Sbjct: 312 LISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371
Query: 401 CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
C+ G + +G L++ + + + G ++DL + ++ A+ + + + V
Sbjct: 372 CASVGALHKGMQ-LHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETE-NIV 429
Query: 461 VWGSLLGACRIHKNV-DLGEIAAKKLFE-LEPNNCGYHVLL 499
+W +L A N+ D EI + E + PN Y +L
Sbjct: 430 LWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSIL 470
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H + K GFD E + ++L+D Y R G + KVFD + +WN +I ++
Sbjct: 81 HCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSN 140
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV-LRLGKCIHDQVIKMDLEESVIVGT 329
+ +F +M+ + + N T + VL A + K +H + + S +V
Sbjct: 141 FQVFCLFRRML-AEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVAN 199
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+ID+Y K G ++ A+K FN + K++ +W AMI+G + EA+ LF M + + P
Sbjct: 200 LLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFP 259
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV--EHYGC--MVDLLGRAGKLKE 445
SVLSA + L + L H I+ G E Y C +V L R+ KL
Sbjct: 260 TPYVLSSVLSASTKIQLFE-----LGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLIS 314
Query: 446 AYDLIEGMKVKADFVVWGSLL 466
A + M + D V + SL+
Sbjct: 315 AERIFSTMNSR-DGVSYNSLI 334
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
+H ++ K + ++ S++D Y + G A K F++ ++V SW MI +
Sbjct: 80 LHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKS 139
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN--TMGHEFNIEPGVEH 429
+ LF +M+ G+ PN TF VL AC + ++ T + F+ P V +
Sbjct: 140 NFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVAN 199
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
++DL + G ++ A + + +K D V W +++
Sbjct: 200 --LLIDLYSKNGYIESAKKVFNCICMK-DIVTWVAMI 233
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/656 (37%), Positives = 370/656 (56%), Gaps = 62/656 (9%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N F WN++I +R G A+ + M + + P T+P +K + + G++ H
Sbjct: 83 NHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELH 142
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
GF +VFV +ALI +YS GE+S AR +FD + ++V+W M++GY ++
Sbjct: 143 DHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSK--GDVVTWNVMISGYNRSKQ 200
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
E++ LF E V S+ + SVLSACS++ V + H +V
Sbjct: 201 FDESMKLFDEM------------ERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKD 248
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
+ + N LID YA G +D + +FD M +D ++W +I+ + G A +
Sbjct: 249 LKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNY 308
Query: 277 FDQM------------------------------VKSTDVKCNAVTLSAVLLAIAHLGVL 306
FD+M +++ ++K + T+ ++L A AHLG L
Sbjct: 309 FDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGAL 368
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
LG+ I + K +++ VG ++IDMY CG V+ A + FN M ++ SWTA+I G
Sbjct: 369 ELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGL 428
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
++ EALD+F +M+KA + P+ +T + VL AC+H+G+V +G + M + IEP
Sbjct: 429 AINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPN 488
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
V HYGCMVDLLGRAG LKEA+++I+ M VK + +VWGSLLGACR+H++ ++ E+AA+++
Sbjct: 489 VAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQIL 548
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
ELEP N +VLL NIYA RWE + R LM +R + KTPG SL+E+ G VH F+ GD
Sbjct: 549 ELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGD 608
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
+ HPQ ++IY L+E++V L+ GY D + V D+ +EEKE + HSEKLA
Sbjct: 609 QVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLIS 668
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH V +L+SKV +RE++VRD RFH+F+ G CSC DYW
Sbjct: 669 SGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 205/445 (46%), Gaps = 63/445 (14%)
Query: 63 SMRKLSLTPTR-----STFPCA-IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
S LS PT T P + IK+C ++ L KQ H Q G + V + +I
Sbjct: 3 SATTLSPPPTHLPSLPQTPPLSLIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIA 59
Query: 117 MYSK--CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESEC 174
K G++ AR +FD +P N W +M+ GY + A+ ++ E L
Sbjct: 60 FCCKHELGDMEYARMVFDTMPGP--NHFVWNNMIKGYSRVGCPNSAVSMYCEML------ 111
Query: 175 GGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYA 234
V D +L +R T H ++K GF S V V N LI Y+
Sbjct: 112 ------ERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYS 165
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
G V V+R VFD + D VTWN +I+ Y ++ E++ +FD+M + V +++TL
Sbjct: 166 LSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEM-ERMRVLPSSITLV 224
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG--------------- 339
+VL A + L L +GK +H V + +E ++ ++IDMY CG
Sbjct: 225 SVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSR 284
Query: 340 ----------------QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
QV LAR F++M E++ SWTAMI GY R +E L LF +M
Sbjct: 285 DVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQ 344
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM--GHEFNIEPGVEHYGCMVDLLGRAG 441
A ++P+ T VS+L+AC+H G ++ G W+ +E I+ V + ++D+ G
Sbjct: 345 AANIKPDEFTMVSILTACAHLGALELG-EWIKAYIDKNEIKIDSFVGN--ALIDMYFNCG 401
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLL 466
+++A + M + D + W +++
Sbjct: 402 NVEKAIRIFNAMPHR-DKISWTAVI 425
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 189/404 (46%), Gaps = 52/404 (12%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K +V +WN +I+ R E+++ F M ++ + P+ T + +CS L DL+ GK+
Sbjct: 182 KGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKR 241
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSD---------------------------- 126
H+ + +ALIDMY+ CG++
Sbjct: 242 VHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQ 301
Query: 127 ---ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
AR FD++P+ R+ VSWT+M+ GY+Q + +E L LF+E + N
Sbjct: 302 VGLARNYFDKMPE--RDFVSWTAMIDGYLQVNRFKEVLSLFREM------------QAAN 347
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ D + S+L+AC+ + + E ++ K + VGN LID Y G+V+ +
Sbjct: 348 IKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAI 407
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
++F+ M +D ++W ++I A NG EALD+F QM+K++ + + VT VL A H
Sbjct: 408 RIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKAS-ITPDEVTCIGVLCACTHS 466
Query: 304 GVLRLGKCIHDQV-IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTA 361
G++ GK ++ + +E +V ++D+ + G + A + M K N W +
Sbjct: 467 GMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGS 526
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPN---YITFVSVLSACS 402
++ +H R E ++ + I N Y+ ++ +AC+
Sbjct: 527 LLGACRVH-RDEEMAEMAAQQILELEPENGAVYVLLCNIYAACN 569
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 251/685 (36%), Positives = 383/685 (55%), Gaps = 62/685 (9%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK- 66
S ++++S K + + +FN ++ V SWN I+ A G +A+R + M K
Sbjct: 73 SWNTILSVYSKLGLLSQMQQIFNLMPFRDGV-SWNLAISGYANYGSCSDAVRVYKLMLKD 131
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
++ R TF + CS + G+Q + Q FGF DVFV S L+DMY+K G + D
Sbjct: 132 AAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYD 191
Query: 127 ARKLFDEIPQRI-----------------------------RNIVSWTSMLTGYVQNDNA 157
A++ FDE+P+R R+ +SWT M+TG +QN
Sbjct: 192 AKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLE 251
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
REAL +F+E L +D SVL+AC + G + H +VI+
Sbjct: 252 REALDMFREMRLA------------GFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRT 299
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
V VG+ L+D Y++ + + VF M +K+ ++W +++ Y QNG + EA+ +F
Sbjct: 300 DHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIF 359
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
+M ++ V+ + TL +V+ + A+L L G H + + L + V ++I +Y K
Sbjct: 360 FEMQRN-GVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGK 418
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
CG + + + F +M ++ SWTA++AGY +A E + LF +M+ G++P+ +TF+ V
Sbjct: 419 CGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGV 478
Query: 398 LSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
LSACS AGLV++G + +M E I P V+H C++DLLGRAG+L+EA + I M
Sbjct: 479 LSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHP 538
Query: 458 DFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRS 517
D V W +LL +CR+H ++++G+ AA L LEP N +VLLS++YA+ G+W+ V + R
Sbjct: 539 DVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRR 598
Query: 518 LMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTS 577
M+++R+ K PG+S ++ +GKVH F D+ P +IY LE+LN K+ E GYV DM+S
Sbjct: 599 GMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSS 658
Query: 578 VIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVD 619
V+HDV++ EK L HSEKLA NLRVCGDCH + ISK+
Sbjct: 659 VLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQ 718
Query: 620 REIVVRDSKRFHYFKDGLCSCGDYW 644
REI+VRD+ RFH FKDG CSCGD+W
Sbjct: 719 REILVRDAVRFHLFKDGTCSCGDFW 743
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 156/365 (42%), Gaps = 73/365 (20%)
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
AS+L C + H ++K E + N LI AY + G++ + VFD + +
Sbjct: 9 ASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQ 68
Query: 252 KDAVTWNSIIAIYAQNGL-------------------------------AAEALDVFDQM 280
+ +WN+I+++Y++ GL ++A+ V+ M
Sbjct: 69 PNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLM 128
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
+K + N +T S +L+ + + LG+ I+ Q++K V VG+ ++DMY K G
Sbjct: 129 LKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGL 188
Query: 341 VDLARKAFNQMKEKNVR-------------------------------SWTAMIAGYGMH 369
+ A++ F++M E+NV SWT MI G +
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQN 248
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH---WLNTMGHEFNIEPG 426
REALD+F +M AG + TF SVL+AC + EG ++ H+ N+ G
Sbjct: 249 GLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVG 308
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
+VD+ + +K A + + M K + + W ++L + E A K F
Sbjct: 309 ----SALVDMYSKCRSIKSAETVFKRMPQK-NVISWTAMLVG---YGQNGFSEEAVKIFF 360
Query: 487 ELEPN 491
E++ N
Sbjct: 361 EMQRN 365
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 253/624 (40%), Positives = 366/624 (58%), Gaps = 35/624 (5%)
Query: 41 WNSVIADLARGGDSVEALRAFSSM-RKLSLTPT-RSTFPCAIKSCSALHDLHSGKQAHQQ 98
+N ++ G +AL F M S P + T CA+KSCS + L G+
Sbjct: 86 YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145
Query: 99 AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR 158
A G D FV S+LI MY+ CG+++ AR +FD + +V W +++ Y++N +
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEES--GVVMWNAIVAAYLKNGDWM 203
Query: 159 EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG 218
E + +FK L E G V D V + SV++AC R+ + + G V + G
Sbjct: 204 EVVEMFKGML----EVG--------VAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEG 251
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
+ L+D YA+ G + +R++FDGM +D V W+++I+ Y Q EAL +F
Sbjct: 252 LARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFS 311
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
+M + V+ N VT+ +VL A A LG L GK +H V + L + I+GT+++D Y KC
Sbjct: 312 EM-QLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKC 370
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G +D A +AF M KN +WTA+I G + R REAL+LF M +AG+ P +TF+ VL
Sbjct: 371 GCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVL 430
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
ACSH+ LV+EG ++M ++ I+P VEHYGCMVDLLGRAG + EAY I M ++ +
Sbjct: 431 MACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPN 490
Query: 459 FVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSL 518
V+W +LL +C +H+NV +GE A K++ L P++ G +VLLSNIYA+AG+W+D R
Sbjct: 491 AVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKE 550
Query: 519 MKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSV 578
MK+R + KTPG SL+EL G V F D +HP+ +IY+ +EE+ +++ GYV + V
Sbjct: 551 MKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADV 610
Query: 579 IHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
+V++ EKE+++ HSEKLA NLRVC DCH+ +LISKV DR
Sbjct: 611 RLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDR 670
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
EIVVRD FH+FKDG CSC DYW
Sbjct: 671 EIVVRDRNIFHHFKDGTCSCNDYW 694
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 170/338 (50%), Gaps = 17/338 (5%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
+++ V WN+++A + GD +E + F M ++ + T + +C + D GK
Sbjct: 182 EESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGK 241
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
G R+ + +AL+DMY+KCGE+ AR+LFD + + R++V+W++M++GY Q
Sbjct: 242 WVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGM--QSRDVVAWSAMISGYTQ 299
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
D REAL LF E L E + V + SVLSAC+ + + H +
Sbjct: 300 ADQCREALGLFSEMQLARVE------------PNDVTMVSVLSACAVLGALETGKWVHSY 347
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V ++ +G L+D YA+ G +D + + F+ M K++ TW ++I A NG EA
Sbjct: 348 VRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREA 407
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSII 332
L++F M + ++ VT VL+A +H ++ G+ D + + ++ V ++
Sbjct: 408 LELFSSM-REAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMV 466
Query: 333 DMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
D+ + G VD A + M E N W A+++ +H
Sbjct: 467 DLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVH 504
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 113/249 (45%), Gaps = 23/249 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ +V +W+++I+ + EAL FS M+ + P T + +C+ L L +G
Sbjct: 282 MQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETG 341
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K H + +AL+D Y+KCG + DA + F+ +P ++N +WT+++ G
Sbjct: 342 KWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMP--VKNSWTWTALIKGMA 399
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N REAL LF E G E +D F+ VL ACS + V EG
Sbjct: 400 TNGRGREALELFSSM----REAG--IEPTDVTFI------GVLMACSHSCL--VEEGRRH 445
Query: 213 F---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII---AIYA 265
F G V ++D R G VD + + M IE +AV W +++ A++
Sbjct: 446 FDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHR 505
Query: 266 QNGLAAEAL 274
G+ EAL
Sbjct: 506 NVGIGEEAL 514
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/570 (42%), Positives = 349/570 (61%), Gaps = 33/570 (5%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H Q G D+ V++ L+ M +K +L A LF+++ +R + VSW+ M+ G+V
Sbjct: 20 KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEER--DPVSWSVMIGGFV 77
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+N + F+E + S+ D+ ++ V+ AC + H
Sbjct: 78 KNGDYERCFQTFRELIRAGSK------------PDNFSLPFVIKACRDTMGLIMGRLIHS 125
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V+K G + V +TL+D YA+ G +D ++++FD M +KD VT +IA YA+ G E
Sbjct: 126 TVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNE 185
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
+ +FDQM + V + V + ++ A A LG + + +HD V V +GT++I
Sbjct: 186 SWVLFDQMRRDGFVP-DKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMI 244
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG +D +R+ F++M++KNV SW+AMI YG H + REAL+LF+ M+ +G+ PN I
Sbjct: 245 DMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRI 304
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+S+L ACSHAGLV +G + M + + P V+HY CMVDLLGRAG+L +A LIE
Sbjct: 305 TFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIEN 364
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M+V+ D +W + LGACRIH+ VDL E AAK L L+ N G+++LLSNIYANAGRW+DV
Sbjct: 365 MEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDV 424
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+ R+LM RRL K PG++ +E+ ++ F GD H + +IYE L+ L+ KL+ GYV
Sbjct: 425 AKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYV 484
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D SV+HDVD+E K L HSEKLA NLRVCGDCH+ +L+
Sbjct: 485 PDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLV 544
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S + R+I+VRD+ RFH+FK+G+CSCGDYW
Sbjct: 545 SAITQRDIIVRDANRFHHFKEGICSCGDYW 574
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 183/369 (49%), Gaps = 22/369 (5%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP 77
KH LFNK +++ V SW+ +I + GD + F + + P + P
Sbjct: 47 KHKDLVTAHLLFNKMEERDPV-SWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLP 105
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
IK+C L G+ H G H D FV S L+DMY+KCG + +A++LFD +P+
Sbjct: 106 FVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPK- 164
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+++V+ T M+ GY + E+ +LF + D D VA+ ++++A
Sbjct: 165 -KDLVTRTVMIAGYAECGKPNESWVLFDQM------------RRDGFVPDKVAMVTIVNA 211
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C+++ H +V R + +V +G +ID YA+ G +D SR++FD M +K+ ++W
Sbjct: 212 CAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISW 271
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV- 316
+++I Y +G EAL++F M+ S + N +T ++L A +H G++ G + +
Sbjct: 272 SAMIGAYGYHGQGREALELFHMMLNSGIIP-NRITFISLLYACSHAGLVDDGLQLFSLMS 330
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREA 375
+ + V T ++D+ + G++D A + M+ EK+ W A + CR
Sbjct: 331 VSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGA----CRIHRQ 386
Query: 376 LDLFYKMIK 384
+DL K K
Sbjct: 387 VDLAEKAAK 395
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 268/732 (36%), Positives = 381/732 (52%), Gaps = 122/732 (16%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
N N + +++ N F N+++ + +A+ + M + ++ T+P +
Sbjct: 75 NINQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQ 134
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLF---------- 131
SCS GK GF DV++ + LI+MY+ CG LSDARK+F
Sbjct: 135 SCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVS 194
Query: 132 ---------------------DEIPQR-----------------------------IRNI 141
D +P+R +++
Sbjct: 195 WNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDL 254
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
VSW+++++ Y QN+ EAL+LFKE N++ + VD V + SVLSACSR+
Sbjct: 255 VSWSALISCYEQNEMYEEALILFKEM------------NANGIMVDEVVVLSVLSACSRL 302
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLI------------------------------- 230
V + HG V+K G ++ V + N LI
Sbjct: 303 LVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMI 362
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
Y + G ++ +R +FD M +KD V+W+++I+ YAQ E L +F +M + K +
Sbjct: 363 SGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEM-QIEGTKPDE 421
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
L +V+ A HL L GK IH + K L+ ++I+GT++I+MY K G V+ A + F
Sbjct: 422 TILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKG 481
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
++EK V +W A+I G M+ ++L F +M + GV PN ITFV+VL AC H GLV EG
Sbjct: 482 LEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEG 541
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
N+M E I P ++HYGCMVDLLGRAG LKEA +LIE M + D WG+LLGAC+
Sbjct: 542 HRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACK 601
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
+ + + GE +KL EL P++ G++VLLSNIYA+ G W DV R +M+ + KTPG
Sbjct: 602 KYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGC 661
Query: 531 SLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMT 590
S++E G+VH FL GDK HPQ+E I L+E+ KL+ GY D V D+D+EEKE T
Sbjct: 662 SMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETT 721
Query: 591 LRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHY 632
L HSEKLA NLR+C DCHT +LISK +REIVVRD RFH+
Sbjct: 722 LFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHH 781
Query: 633 FKDGLCSCGDYW 644
FK G CSC DYW
Sbjct: 782 FKQGSCSCMDYW 793
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 201/454 (44%), Gaps = 76/454 (16%)
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG--EL 124
+L PT T P ++ Q Q + GF +D F +S L+ ++ +
Sbjct: 18 FTLKPTL-TLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFINI 76
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
+ + ++F I N +M+ GY+Q ++ +A+ ++K F+LE NV
Sbjct: 77 NQSYQIFSHIENP--NGFICNTMMKGYMQRNSPCKAIWVYK-FMLE-----------SNV 122
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
D+ + +CS + V+K GFDS+V + NTLI+ YA G++ +RK
Sbjct: 123 AADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARK 182
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VFDG D V+WNS++A Y G EA DV+D+M
Sbjct: 183 VFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMP----------------------- 219
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
E +VI S+I ++ K G V+ A K FN+MK+K++ SW+A+I+
Sbjct: 220 -----------------ERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALIS 262
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
Y + EAL LF +M G+ + + +SVLSACS +V G + H ++
Sbjct: 263 CYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITG-----KLVHGLVVK 317
Query: 425 PGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
G+E Y ++ + ++ A L D + W S++ V GEI
Sbjct: 318 VGIETYVNLQNALIHMYSSCEEVVTAQKLFSE-SCCLDQISWNSMISG-----YVKCGEI 371
Query: 481 -AAKKLFELEP--NNCGYHVLLSNIYANAGRWED 511
A+ LF+ P +N + ++S YA R+ +
Sbjct: 372 EKARALFDSMPDKDNVSWSAMISG-YAQQDRFTE 404
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 21/265 (7%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S +S++S K LF+ DK+NV SW+++I+ A+ E L F M+
Sbjct: 357 SWNSMISGYVKCGEIEKARALFDSMPDKDNV-SWSAMISGYAQQDRFTETLVLFQEMQIE 415
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
P + I +C+ L L GK H G ++ + + LI+MY K G + DA
Sbjct: 416 GTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDA 475
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
++F + + + + +W +++ G N ++L F E V +
Sbjct: 476 LEVFKGLEE--KGVSTWNALILGLAMNGLVDKSLKTFSEM------------KEHGVTPN 521
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
+ +VL AC + + V EG F + + + ++D R G + + +
Sbjct: 522 EITFVAVLGACRHMGL--VDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEE 579
Query: 245 VFDGM-IEKDAVTWNSIIAIYAQNG 268
+ + M + D TW +++ + G
Sbjct: 580 LIESMPMAPDVSTWGALLGACKKYG 604
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/645 (38%), Positives = 367/645 (56%), Gaps = 47/645 (7%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
+V +WN++I+ L +GG EA+ M L + P TF A+ +CS L L G++
Sbjct: 245 GDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREM 304
Query: 96 HQQAFIFG-FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H + FV+SAL+DMY+ +++ AR++FD +P+ R + W +M+ GY Q
Sbjct: 305 HAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQA 364
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
EAL LF E+E G A + ++ VL AC+R E HG+V
Sbjct: 365 GMDEEALELFSRM---EAEAGCAPSET--------TMSGVLPACARSEGFAGKEAMHGYV 413
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+KRG V N L+D YAR G +DV+R++F + +D V+WN++I G AAEA
Sbjct: 414 VKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAF 473
Query: 275 DVFDQM---------VKSTDV----KC--NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+ +M +T+ +C N +TL +L A L GK IH ++
Sbjct: 474 QLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRH 533
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
LE + VG++++DMY KCG + +R F+++ +NV +W +I YGMH EA+ LF
Sbjct: 534 ALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALF 593
Query: 380 YKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
+M G PN +TF++ L+ACSH+GLV G + M + ++P + + C+VD+LG
Sbjct: 594 DEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLG 653
Query: 439 RAGKLKEAYDLIEGMKVKADFV-VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
RAG+L EAY +I M+ V W SLLGACR+H+NV+LGE+AA++LFELEP ++V
Sbjct: 654 RAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYV 713
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
LL NIY+ AG W+ R M+ + +AK PG S +EL G +H F+ G+ HP +++
Sbjct: 714 LLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHA 773
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
+++ L +++ GY D + V+HDVD++EK LR HSEKLA
Sbjct: 774 HMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAK 833
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + +SK+V R+IV+RD +RFH+F+DG CSCGDYW
Sbjct: 834 NLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 199/420 (47%), Gaps = 40/420 (9%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFG-FHRD-VFVSSALIDMYSKCGELSDARKLFD 132
P AIKS +AL D + + H A HR V +AL+ Y++CG+L A LF
Sbjct: 65 ALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFA 124
Query: 133 EIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIA 192
+R+ VS+ S+++ AL ++ L E V S +
Sbjct: 125 ATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRH-----------DVSSFTLV 173
Query: 193 SVLSACSRVTVNG---VTEGAHGFVIKRGF---DSEVGVGNTLIDAYARGGHVDVSRKVF 246
SVL ACS + + + AH F +KRGF E N L+ YAR G VD ++ +F
Sbjct: 174 SVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLF 233
Query: 247 DGMIEK------DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
D VTWN++I++ Q G AEA++V MV S V+ + VT ++ L A
Sbjct: 234 RTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMV-SLGVRPDGVTFASALPAC 292
Query: 301 AHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE--KNVR 357
+ L +L LG+ +H V+K DL + V ++++DMY +V AR+ F+ + E + +
Sbjct: 293 SRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLG 352
Query: 358 SWTAMIAGYGMHCRAREALDLFYKM-IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
W AMI GY EAL+LF +M +AG P+ T VL AC+ + EG+
Sbjct: 353 MWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARS----EGFAGKEA 408
Query: 417 MGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
M H + ++ G+ ++D+ R G++ A + M D V W +L+ C +
Sbjct: 409 M-HGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIF-AMIDPRDVVSWNTLITGCVVQ 466
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/660 (36%), Positives = 370/660 (56%), Gaps = 63/660 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW S+I ARG EA+ F M + + P+ T C I +C+ L DL G
Sbjct: 192 MSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMG 251
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ G + + +AL+DMY KCG + A++LFDE R N+V + ++L+ Y
Sbjct: 252 ERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDR--NLVLYNTILSNYA 309
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ AREAL + E L + D V + S +SA +++ + HG
Sbjct: 310 RQGLAREALAILDEMLQQGPR------------PDRVTMLSAISASAQLVDLFYGKVCHG 357
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+VI+ G + +GN +ID Y + G +++ +VFD M K V+WNS+ A + +NG
Sbjct: 358 YVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVES 417
Query: 273 ALDVFDQM------------------------------VKSTDVKCNAVTLSAVLLAIAH 302
A +VF+Q+ ++ +K + VT+ + A +
Sbjct: 418 AWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGY 477
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
LG L K +H + K + + + T+++DM+ +CG A + FN+M E++V +WTA
Sbjct: 478 LGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAA 537
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
I M A LF +M+ GV+P+ + FV VL+ACSH G V++G H + M +
Sbjct: 538 IGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLM-EDHG 596
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
I P +EHYGCMVDLLGRAG L+EA+DLI+ M ++ + VVWGSLL ACR+HKNV++ AA
Sbjct: 597 ISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAA 656
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
+++ EL P G HVLLSNIYA+AG+W DV R R ++ + + K PG S V++ G +H F
Sbjct: 657 ERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEF 716
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
GD+ HP+ I L+E+N + + G++ D+++V+ DVD++EKE L HSEKLA
Sbjct: 717 TSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAF 776
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH+ ++ S + +REI+VRD+ RFH+F+ GLCSC DYW
Sbjct: 777 GLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 134/479 (27%), Positives = 230/479 (48%), Gaps = 49/479 (10%)
Query: 28 LFNKYVDKNN-VFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
LF + V ++ +F NS+I + G EA+ + M L +TP TFP + C+ +
Sbjct: 85 LFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKI 144
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
G Q H G DVF+ + LI Y++CG + K+F+ + + RN+VSWTS
Sbjct: 145 AAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSE--RNVVSWTS 202
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ GY + D +EA+ LF E + E G + SV + V+SAC+++ +
Sbjct: 203 LICGYARGDRPKEAVSLFFEMV----EAG--------IRPSSVTMVCVISACAKLRDLDM 250
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
E ++ + G + N L+D Y + G +D ++++FD ++++ V +N+I++ YA+
Sbjct: 251 GERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYAR 310
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
GLA EAL + D+M++ + + VT+ + + A A L L GK H VI+ LE
Sbjct: 311 QGLAREALAILDEMLQQGP-RPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDS 369
Query: 327 VGTSIIDMYCKCGQVDLARK-------------------------------AFNQMKEKN 355
+G IIDMY KCG+ ++A + FNQ+ E+N
Sbjct: 370 IGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERN 429
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
W MI+G +A++LF +M G++ + +T + + SAC + G E W++
Sbjct: 430 AVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLG-APELAKWVH 488
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
T + I + +VD+ R G + A + M + D W + +G + N
Sbjct: 489 TYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKM-TERDVSAWTAAIGTMAMEGN 546
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 203/400 (50%), Gaps = 38/400 (9%)
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD------ARKLFD 132
+++ C L+ L KQ H Q G + + S L + + E++ ARK F+
Sbjct: 31 SLRCCKTLNQL---KQLHCQITKNGLDQ---IPSTLTKLVNAGAEIASPESLDYARKAFE 84
Query: 133 EIPQRIRN---IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+ +R+ + S++ GY REA+LL+ L+ G + N
Sbjct: 85 LFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVL-----GVTPNH-------Y 132
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
VLS C+++ HG V+K G + +V + N LI YA GH+D KVF+GM
Sbjct: 133 TFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGM 192
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
E++ V+W S+I YA+ EA+ +F +MV++ ++ ++VT+ V+ A A L L +G
Sbjct: 193 SERNVVSWTSLICGYARGDRPKEAVSLFFEMVEA-GIRPSSVTMVCVISACAKLRDLDMG 251
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
+ + + ++ L+ + ++ +++DMY KCG +D A++ F++ ++N+ + +++ Y
Sbjct: 252 ERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQ 311
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
AREAL + +M++ G RP+ +T +S +SA A LV + + H + I G+E
Sbjct: 312 GLAREALAILDEMLQQGPRPDRVTMLSAISA--SAQLVD---LFYGKVCHGYVIRNGLEG 366
Query: 430 Y----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
+ ++D+ + GK + A + + M K V W SL
Sbjct: 367 WDSIGNVIIDMYMKCGKPEMACRVFDLMSNKT-VVSWNSL 405
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 167/365 (45%), Gaps = 30/365 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ VD+N V +N+++++ AR G + EAL M + P R T AI + + L
Sbjct: 289 LFDECVDRNLVL-YNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLV 347
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL GK H G + + +IDMY KCG+ A ++FD + + +VSW S+
Sbjct: 348 DLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNK--TVVSWNSL 405
Query: 148 LTGYVQNDNAREALLLFKEF--------------LLEESECGGASE-----NSDNVFVDS 188
G+++N + A +F + L+++S A E + + D
Sbjct: 406 TAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADR 465
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
V + + SAC + + + H ++ K G ++ + L+D +AR G + +VF+
Sbjct: 466 VTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNK 525
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M E+D W + I A G A +F+QM+ VK + V VL A +H G +
Sbjct: 526 MTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQ-GVKPDVVLFVQVLTACSHGGQVEQ 584
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK----EKNVRSWTAMIA 364
G I + + + ++D+ G+ L R+AF+ +K E N W +++A
Sbjct: 585 GLHIFSLMEDHGISPQIEHYGCMVDLL---GRAGLLREAFDLIKSMPMEPNDVVWGSLLA 641
Query: 365 GYGMH 369
+H
Sbjct: 642 ACRVH 646
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 130/264 (49%), Gaps = 11/264 (4%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDA---YARGGHVDVSRKVFDGMIEK----DAV-TWNSIIA 262
H + K G D L++A A +D +RK F+ E DA+ NS+I
Sbjct: 45 HCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNSLIR 104
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
Y+ GL EA+ ++ +M+ V N T VL + G +H V+KM LE
Sbjct: 105 GYSSAGLGREAILLYVRML-VLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLE 163
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
E V + +I Y +CG +D K F M E+NV SWT++I GY R +EA+ LF++M
Sbjct: 164 EDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEM 223
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
++AG+RP+ +T V V+SAC+ + G +G E ++ +VD+ + G
Sbjct: 224 VEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIG-ELGLKLNKVMVNALVDMYMKCGA 282
Query: 443 LKEAYDLIEGMKVKADFVVWGSLL 466
+ A L + V + V++ ++L
Sbjct: 283 IDAAKRLFDEC-VDRNLVLYNTIL 305
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/635 (39%), Positives = 368/635 (57%), Gaps = 35/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ D++ V SWNS+I+ G S + L F M L + +T + CS
Sbjct: 207 LFDELGDRD-VISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTG 265
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+ H A F +++ +++ L+DMYSK G L+ A ++F+ + +R ++VSWTSM
Sbjct: 266 MLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGER--SVVSWTSM 323
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY ARE L L E E G S D I ++L AC+ +
Sbjct: 324 IAGY-----AREGLSDMSVRLFHEMEKEGISP-------DIFTITTILHACACTGLLENG 371
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H ++ + S++ V N L+D YA+ G + + VF M KD V+WN++I Y++N
Sbjct: 372 KDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKN 431
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
L EAL++F +M + K N++T++ +L A A L L G+ IH +++ V
Sbjct: 432 SLPNEALNLFVEM--QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHV 489
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+++DMY KCG + LAR F+ + EK++ SWT MIAGYGMH EA+ F +M +G+
Sbjct: 490 ANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGI 549
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ ++F+S+L ACSH+GL+ EGW + N M + IEP EHY C+VDLL RAG L +AY
Sbjct: 550 EPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAY 609
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I+ M ++ D +WG+LL CRI+ +V L E A+ +FELEP N GY+VLL+NIYA A
Sbjct: 610 KFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAE 669
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+WE+V++ R + R L K PG S +E++GKVH F+ GD HP KI L++ +++
Sbjct: 670 KWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMK 729
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E G+ M + D EKEM L HSEK+A NLRVCGDCH
Sbjct: 730 EEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHE 789
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ + +SK+V R+I++RDS RFH+FKDG CSC +W
Sbjct: 790 MAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/519 (25%), Positives = 239/519 (46%), Gaps = 73/519 (14%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
+ SS + +VS+ HS T T++ + +N I G+ A+ +
Sbjct: 35 RPSSKTPLVSSNLYHSCATIGTSVLPSETIDCKITDYNIEICRFCELGNLRRAMELINQS 94
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
K L T+ ++ C+ L + G++ H D + S L+ MY CG+L
Sbjct: 95 PKPDLE--LRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDL 152
Query: 125 SDARKLFDEIP-----------------------------------QRI----------- 138
+ R++FD++ +R+
Sbjct: 153 REGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELG 212
Query: 139 -RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
R+++SW SM++GYV N + + L LF++ LL + D + SV++
Sbjct: 213 DRDVISWNSMISGYVSNGLSEKGLDLFEQMLLL------------GINTDLATMVSVVAG 260
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
CS + + HG+ IK F E+ + N L+D Y++ G+++ + +VF+ M E+ V+W
Sbjct: 261 CSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSW 320
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
S+IA YA+ GL+ ++ +F +M K + + T++ +L A A G+L GK +H+ +
Sbjct: 321 TSMIAGYAREGLSDMSVRLFHEMEKE-GISPDIFTITTILHACACTGLLENGKDVHNYIK 379
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ ++ + V +++DMY KCG + A F++M+ K++ SW MI GY + EAL+
Sbjct: 380 ENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALN 439
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH----EFNIEPGVEHYGCM 433
LF +M + +PN IT +L AC+ ++ G GH F+++ V + +
Sbjct: 440 LFVEM-QYNSKPNSITMACILPACASLAALERGQE---IHGHILRNGFSLDRHVAN--AL 493
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
VD+ + G L A L + M + D V W ++ +H
Sbjct: 494 VDMYLKCGALGLARLLFD-MIPEKDLVSWTVMIAGYGMH 531
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 182/354 (51%), Gaps = 20/354 (5%)
Query: 16 VDKHSTNTNLTTLFNKY--VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTR 73
+D +S + NL + + + + +V SW S+IA AR G S ++R F M K ++P
Sbjct: 293 LDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDI 352
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDE 133
T + +C+ L +GK H D+FVS+AL+DMY+KCG + DA +F E
Sbjct: 353 FTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSE 412
Query: 134 IPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
+ ++++IVSW +M+ GY +N EAL LF E N +S+ +A
Sbjct: 413 M--QVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-------------QYNSKPNSITMAC 457
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+L AC+ + + HG +++ GF + V N L+D Y + G + ++R +FD + EKD
Sbjct: 458 ILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKD 517
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V+W +IA Y +G +EA+ F++M +++ ++ + V+ ++L A +H G+L G
Sbjct: 518 LVSWTVMIAGYGMHGYGSEAIAAFNEM-RNSGIEPDEVSFISILYACSHSGLLDEGWGFF 576
Query: 314 DQVI-KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAG 365
+ + +E I+D+ + G + A K M E + W A++ G
Sbjct: 577 NMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 630
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 112/233 (48%), Gaps = 37/233 (15%)
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
+++S DV+ + V S ++ G LR G+ I D+V E V + +++ Y K G
Sbjct: 126 IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVAN----EKVFLWNLLMNGYAKIG 181
Query: 340 ------------------QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK 381
+V+ ARK F+++ +++V SW +MI+GY + + + LDLF +
Sbjct: 182 NFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQ 241
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLV-----QEGWHWLNTMGHEFNIEPGVEHYGCMVDL 436
M+ G+ + T VSV++ CS+ G++ G+ + G E + C++D+
Sbjct: 242 MLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLN------NCLLDM 295
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
++G L A + E M ++ V W S++ + L +++ + E+E
Sbjct: 296 YSKSGNLNSAIQVFETMGERS-VVSWTSMIAG---YAREGLSDMSVRLFHEME 344
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/635 (39%), Positives = 358/635 (56%), Gaps = 35/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ D++ V SWN+++ LA+ G EA F M++ L P +T+ + + +
Sbjct: 480 VFDGMCDRD-VISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTD 538
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L + H+ A G D V SA I MY +CG + DAR LFD++ +R++ +W +M
Sbjct: 539 ALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLS--VRHVTTWNAM 596
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G Q REAL LF + + D+ ++LSA
Sbjct: 597 IGGAAQQRCGREALSLFLQM------------QREGFIPDATTFINILSANVDEEALEWV 644
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H G ++ VGN L+ Y++ G+V +++VFD M+E++ TW +I AQ+
Sbjct: 645 KEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQH 703
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G +A F QM++ V +A T ++L A A G L K +H+ + L + V
Sbjct: 704 GCGHDAFSHFLQMLREGIVP-DATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRV 762
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G +++ MY KCG +D AR F+ M E++V SWT MI G H R EALD F KM G
Sbjct: 763 GNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGF 822
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+PN ++V+VL+ACSHAGLV EG +M ++ IEP +EHY CMVDLLGRAG L+EA
Sbjct: 823 KPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAE 882
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I M ++ D WG+LLGAC + N+++ E AAK+ +L+P + +VLLSNIYA G
Sbjct: 883 LFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATG 942
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+WE RS+M+ + + K PG S +E+ ++H+F+VGD HP+ ++IY L +L +L+
Sbjct: 943 KWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLK 1002
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV D V+ + DQE KE L HSEKLA NLRVC DCHT
Sbjct: 1003 AKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHT 1062
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ ISK+ REIV RD+KRFH+FKDG+CSCGDYW
Sbjct: 1063 ATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 221/447 (49%), Gaps = 28/447 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K + K N++ W ++I A G + +A+R + MR+ P T+ +K+C
Sbjct: 175 VFDKLL-KKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPV 233
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L GK+ H GF DV V +AL++MY KCG + DA+ +FD++ + RN++SWT M
Sbjct: 234 NLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVE--RNVISWTVM 291
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G +EA LF + + +S S+L+A +
Sbjct: 292 IGGLAHYGRGQEAFHLFLQM------------QREGFIPNSYTYVSILNANASAGALEWV 339
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H + G ++ VGN L+ YA+ G +D +R VFDGM E+D +W +I AQ+
Sbjct: 340 KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQH 399
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVL--LAIAHLGVLRLGKCIHDQVIKMDLEESV 325
G EA +F QM ++ + N T ++L AIA L K +H + +
Sbjct: 400 GRGQEAFSLFLQMQRNGCLP-NLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDL 458
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+G ++I MY KCG +D AR F+ M +++V SW AM+ G + EA +F +M +
Sbjct: 459 RIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQE 518
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV----EHYGCMVDLLGRAG 441
G+ P+ T++S+L+ +H + W+N + H+ +E G+ + + R G
Sbjct: 519 GLVPDSTTYLSLLN--THGS--TDALEWVNEV-HKHAVETGLISDFRVGSAFIHMYIRCG 573
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ +A L + + V+ W +++G
Sbjct: 574 SIDDARLLFDKLSVR-HVTTWNAMIGG 599
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 147/589 (24%), Positives = 270/589 (45%), Gaps = 69/589 (11%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++ C D+ KQ H G ++++V++ L+ +Y +CG L AR++FD++ ++
Sbjct: 125 LQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKK-- 182
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
NI WT+M+ GY + +A +A+ ++ + ECG +E + S+L AC
Sbjct: 183 NIYIWTTMIGGYAEYGHAEDAMRVYDKM---RQECGQPNE---------ITYLSILKACC 230
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ H +I+ GF S+V V L++ Y + G ++ ++ +FD M+E++ ++W
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+I A G EA +F QM + + N+ T ++L A A G L K +H +
Sbjct: 291 MIGGLAHYGRGQEAFHLFLQMQREGFIP-NSYTYVSILNANASAGALEWVKEVHSHAVNA 349
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
L + VG +++ MY K G +D AR F+ M E+++ SWT MI G H R +EA LF
Sbjct: 350 GLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLF 409
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVD 435
+M + G PN T++S+L+A + A W+ + H+ E G + ++
Sbjct: 410 LQMQRNGCLPNLTTYLSILNASAIAS--TSALEWVKVV-HKHAEEAGFISDLRIGNALIH 466
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE-----P 490
+ + G + +A + +GM D + W +++G + +N G A +++ P
Sbjct: 467 MYAKCGSIDDARLVFDGM-CDRDVISWNAMMGG--LAQN-GCGHEAFTVFLQMQQEGLVP 522
Query: 491 NNCGYHVLLSNIYANAGRWEDVERTR------SLMKNRRLAKTPGFSLVELRGKVHAFLV 544
++ Y LL N + + E V L+ + R+ + A L+
Sbjct: 523 DSTTYLSLL-NTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLL 581
Query: 545 GDKEHPQHEKIYEYL-------------EELNVKLQEVGYVTDMTSVIH----DVDQEEK 587
DK +H + + L +++Q G++ D T+ I+ +VD+E
Sbjct: 582 FDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEAL 641
Query: 588 EMTLRIHSEK----LANLRV----------CGDCHTVIRLISKVVDREI 622
E +HS L +LRV CG+ ++ +V+R +
Sbjct: 642 EWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNV 690
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 165/314 (52%), Gaps = 14/314 (4%)
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ +DS + ++L C + + + H +IK G + + V N L+ Y R G + +R
Sbjct: 114 IAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCAR 173
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+VFD +++K+ W ++I YA+ G A +A+ V+D+M + + N +T ++L A
Sbjct: 174 QVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECG-QPNEITYLSILKACCCP 232
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L+ GK IH +I+ + V V T++++MY KCG ++ A+ F++M E+NV SWT MI
Sbjct: 233 VNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMI 292
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
G + R +EA LF +M + G PN T+VS+L+A + AG ++ W+ + H +
Sbjct: 293 GGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE----WVKEV-HSHAV 347
Query: 424 EPG----VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
G + +V + ++G + +A + +GM + D W ++G H G+
Sbjct: 348 NAGLALDLRVGNALVHMYAKSGSIDDARVVFDGM-TERDIFSWTVMIGGLAQHGR---GQ 403
Query: 480 IAAKKLFELEPNNC 493
A +++ N C
Sbjct: 404 EAFSLFLQMQRNGC 417
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/535 (43%), Positives = 341/535 (63%), Gaps = 33/535 (6%)
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
RK+F+ +P++ ++VSW +++ G NAR L + E L E GGA N+ D
Sbjct: 254 RKIFEMMPEK--DLVSWNTIIAG-----NARNGL--YGETLTMVREMGGA-----NLKPD 299
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
S ++SVL + + HG I++G D+EV V ++LID YA+ V S +VF
Sbjct: 300 SFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFT 359
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ E+D ++WNSIIA QNGL E L F QM+ + +K + + S+++ A AHL L
Sbjct: 360 LLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMA-KIKPKSYSFSSIMPACAHLTTLH 418
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
LGK +H + + +E++ + +S++DMY KCG + AR+ F++M+ +++ SWTAMI G
Sbjct: 419 LGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCA 478
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+H A +A++LF +M G+ PNY+ F++VL+ACSHAGLV E W + N+M +F I PGV
Sbjct: 479 LHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGV 538
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
EHY + DLLGRAG+L+EAYD I GM + VW +LL ACR+HKNVD+ E A ++ E
Sbjct: 539 EHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILE 598
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
++P N G ++LL+NIY+ A RW++ + R+ ++ + KTP S +E+R KV+AF+ GD+
Sbjct: 599 VDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDE 658
Query: 548 EHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------- 599
HP +EKI E +E L +++ GYV D + V HDV++E+K+ + HSE+LA
Sbjct: 659 SHPCYEKIREAMEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINT 718
Query: 600 ----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT + ISK+V REIVVRD+ RFH+FK+G CSCGDYW
Sbjct: 719 PAGTTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 186/366 (50%), Gaps = 21/366 (5%)
Query: 19 HSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC 78
HS + + + + + ++ SWN++IA AR G E L M +L P T
Sbjct: 246 HSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSS 305
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
+ + D+ GK+ H + G +V+V+S+LIDMY+KC + D+ ++F + +
Sbjct: 306 VLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTE-- 363
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
R+ +SW S++ G VQN E L F++ L+ + + S + +S++ AC
Sbjct: 364 RDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAK------------IKPKSYSFSSIMPAC 411
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ +T + + HG++ + GFD + + ++L+D YA+ G++ +R++FD M +D V+W
Sbjct: 412 AHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWT 471
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL-RLGKCIHDQVI 317
++I A +G A +A+++F+QM K+ ++ N V AVL A +H G++ K + +
Sbjct: 472 AMIMGCALHGHALDAIELFEQM-KTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTL 530
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMHCRAREAL 376
+ V ++ D+ + G+++ A M S W +++ CR + +
Sbjct: 531 DFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSA----CRVHKNV 586
Query: 377 DLFYKM 382
D+ K+
Sbjct: 587 DMAEKV 592
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 166/418 (39%), Gaps = 84/418 (20%)
Query: 77 PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
P +IKS S +Q H Q F + S L+ +YS L D+ +LF+ +
Sbjct: 18 PLSIKSRS------QAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTL-- 68
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
++W S++ Y + ++L F L + ++ D SVL
Sbjct: 69 HFPPALAWKSVIRCYTSHGLPHKSLGSFIGML------------ASGLYPDHNVFPSVLK 116
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR-------GGHVDVSRKVFDGM 249
AC+ + + E HG++I+ G D ++ GN L++ Y++ G + +V D M
Sbjct: 117 ACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEM 176
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG---VL 306
E+ + + + Q G ++ F+ DV C + A +L I +
Sbjct: 177 TERTRSVRTASVLVGNQ-GRKVSDIEAFNY-----DVSCRSREFEAQVLEIDYKPRSEYR 230
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
+ C Q IK D+ S+ VD RK F M EK++ SW +IAG
Sbjct: 231 EMEACNLGQQIK-DISHSM--------------SVDSVRKIFEMMPEKDLVSWNTIIAGN 275
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ E L + +M A ++P+ T SVL L+ E +I G
Sbjct: 276 ARNGLYGETLTMVREMGGANLKPDSFTLSSVLP------LIAEN----------VDISKG 319
Query: 427 VEHYGC---------------MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
E +GC ++D+ + ++ ++Y + + + D + W S++ C
Sbjct: 320 KEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFT-LLTERDGISWNSIIAGC 376
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/646 (37%), Positives = 356/646 (55%), Gaps = 74/646 (11%)
Query: 17 DKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTF 76
+ H +N + + NVF WN VI +A+ + M + P + T+
Sbjct: 77 NPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTY 135
Query: 77 PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
P K+CS + G+Q H G DV + SA I MY+ G L DARK+F
Sbjct: 136 PTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGES 195
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
++V W +M+ GY++
Sbjct: 196 ---DVVCWNTMIDGYLK------------------------------------------- 209
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
C GV E A G + + +G N +I+ A+GG++ +RK+FD M E+D ++
Sbjct: 210 -C------GVLEAAKGLFAQMPVKN-IGSWNVMINGLAKGGNLGDARKLFDEMSERDEIS 261
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
W+S++ Y G EAL++F QM + + + LS+VL A +++G + G+ +H +
Sbjct: 262 WSSMVDGYISAGRYKEALEIFQQMQRE-ETRPGRFILSSVLAACSNIGAIDQGRWVHAYL 320
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
+ ++ ++GT+++DMY KCG++D+ + F +MKE+ + +W AMI G +H RA +AL
Sbjct: 321 KRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDAL 380
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDL 436
+LF K+ + ++PN IT V VL+AC+HAG V +G TM + ++P +EHYGCMVDL
Sbjct: 381 ELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDL 440
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYH 496
LGR+G EA DLI M +K + VWG+LLGACRIH N DL E K L ELEP N G +
Sbjct: 441 LGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRY 500
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
VLLSNIYA GR++DV + R LMKNR + PG S+V+L G VH F +GD HPQ ++IY
Sbjct: 501 VLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIY 560
Query: 557 EYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------------- 599
L+ + +LQ G+ D + V+ D+D+EEKE + HSEKLA
Sbjct: 561 RKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIV 620
Query: 600 -NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH+ +LIS++ DREI+VRD R+H+FK+G CSC D+W
Sbjct: 621 KNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 155/361 (42%), Gaps = 33/361 (9%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M + S + +++ + K + LF++ +++ + SW+S++ G EAL
Sbjct: 223 MPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEI-SWSSMVDGYISAGRYKEALEI 281
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F M++ P R + +CS + + G+ H D + +AL+DMY+K
Sbjct: 282 FQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAK 341
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG L ++F+E+ + R I +W +M+ G + A +AL LF + L+E
Sbjct: 342 CGRLDMGWEVFEEMKE--REIFTWNAMIGGLAIHGRAEDALELFSK--LQEGR------- 390
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR---GFDSEVGVGNTLIDAYARGG 237
+ + + + VL+AC+ V +G F R G D E+ ++D R G
Sbjct: 391 ---MKPNGITLVGVLTACAHAGF--VDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSG 445
Query: 238 HVDVSRKVFDGM-IEKDAVTWNSIIA---IYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ + + M ++ +A W +++ I+ LA + ++ + V L
Sbjct: 446 LFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGR--YVLL 503
Query: 294 SAVLLAIAHL-GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
S + + V ++ K + ++ IK + G SI+D+ + + + QMK
Sbjct: 504 SNIYAKVGRFDDVSKIRKLMKNRGIK------TVPGVSIVDLNGTVHEFKMGDGSHPQMK 557
Query: 353 E 353
E
Sbjct: 558 E 558
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/635 (39%), Positives = 366/635 (57%), Gaps = 50/635 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ KN++ SWN ++A R G EA R F S L C + +
Sbjct: 148 VFDRMPHKNSI-SWNGLLAAYVRSGRLEEARRLFESKSDWELISCN----CLMGGYVKRN 202
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L +Q Q + RD+ + +I Y++ G+LS AR+LF+E P +R++ +WT+M
Sbjct: 203 MLGDARQLFDQIPV----RDLISWNTMISGYAQDGDLSQARRLFEESP--VRDVFTWTAM 256
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ YVQ+ EA +F E + E S NV + A + +
Sbjct: 257 VYAYVQDGMLDEARRVFDEMPQKR-------EMSYNVMIAGYAQYKRMDMGREL------ 303
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ +G N +I Y + G + +R +FD M ++D+V+W +IIA YAQN
Sbjct: 304 -------FEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQN 356
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL EA+++ +M + + N T L A A + L LGK +H QV++ E+ +V
Sbjct: 357 GLYEEAMNMLVEMKRDGE-SLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLV 415
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G +++ MYCKCG +D A F ++ K++ SW M+AGY H R+AL +F MI AGV
Sbjct: 416 GNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGV 475
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+P+ IT V VLSACSH GL G + ++M ++ I P +HY CM+DLLGRAG L+EA
Sbjct: 476 KPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQ 535
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+LI M + D WG+LLGA RIH N++LGE AA+ +F++EP+N G +VLLSN+YA +G
Sbjct: 536 NLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASG 595
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RW DV + R M+ + KTPG+S VE++ K+H F VGD HP+ +IY +LEEL++K++
Sbjct: 596 RWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMK 655
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV+ V+HDV++EEK+ L+ HSEKLA NLRVC DCH
Sbjct: 656 HEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHN 715
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+ ISK+V R I+VRDS R+H+F +G+CSC DYW
Sbjct: 716 AIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 192/387 (49%), Gaps = 40/387 (10%)
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
H+D+F + ++ Y++ L DAR LFD +P+ +++VSW +ML+GYV++ + EA +F
Sbjct: 92 HKDLFSWNLMLTGYARNRRLRDARMLFDSMPE--KDVVSWNAMLSGYVRSGHVDEARDVF 149
Query: 165 KEF----------LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
LL G E + +F +S + ++S C+ + V G
Sbjct: 150 DRMPHKNSISWNGLLAAYVRSGRLEEARRLF-ESKSDWELIS-CNCLMGGYVKRNMLGDA 207
Query: 215 IKRGFDS----EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
++ FD ++ NT+I YA+ G + +R++F+ +D TW +++ Y Q+G+
Sbjct: 208 -RQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGML 266
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA VFD+M + ++ N ++ A + +G+ + +++ ++ I
Sbjct: 267 DEARRVFDEMPQKREMSYN-----VMIAGYAQYKRMDMGRELFEEMPFPNIGSWNI---- 317
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+I YC+ G + AR F+ M +++ SW A+IAGY + EA+++ +M + G N
Sbjct: 318 MISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLN 377
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD--LLG---RAGKLKE 445
TF LSAC+ ++ L H + G E GC+V L+G + G + E
Sbjct: 378 RSTFCCALSACADIAALE-----LGKQVHGQVVRTGYEK-GCLVGNALVGMYCKCGCIDE 431
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIH 472
AYD+ +G++ K D V W ++L H
Sbjct: 432 AYDVFQGVQHK-DIVSWNTMLAGYARH 457
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 139/288 (48%), Gaps = 28/288 (9%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N ++ YAR + +R +FD M EKD V+WN++++ Y ++G EA DVFD+M
Sbjct: 99 NLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHK--- 155
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
N+++ + +L A G L + + + K D E +I ++ Y K + AR+
Sbjct: 156 --NSISWNGLLAAYVRSGRLEEARRLFES--KSDWE--LISCNCLMGGYVKRNMLGDARQ 209
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F+Q+ +++ SW MI+GY +A LF ++ VR + T+ +++ A G+
Sbjct: 210 LFDQIPVRDLISWNTMISGYAQDGDLSQARRLFE---ESPVR-DVFTWTAMVYAYVQDGM 265
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ E + M + + Y M+ + ++ +L E M + W ++
Sbjct: 266 LDEARRVFDEMPQKREMS-----YNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMI 319
Query: 467 -GACRIHKNVDLGEIAAKKLFELEP--NNCGYHVLLSNIYANAGRWED 511
G C +N DL + A+ LF++ P ++ + +++ YA G +E+
Sbjct: 320 SGYC---QNGDLAQ--ARNLFDMMPQRDSVSWAAIIAG-YAQNGLYEE 361
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 230 IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCN 289
I + R GH D++ VFD M +++V++N++I+ Y +N + A D+FD+M +
Sbjct: 40 ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHK-----D 94
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
+ + +L A LR + + D + E+ V+ +++ Y + G VD AR F+
Sbjct: 95 LFSWNLMLTGYARNRRLRDARMLFDSMP----EKDVVSWNAMLSGYVRSGHVDEARDVFD 150
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
+M KN SW ++A Y R EA LF
Sbjct: 151 RMPHKNSISWNGLLAAYVRSGRLEEARRLF 180
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
T I + + G DLA F+ M +N S+ AMI+GY + + A DLF KM
Sbjct: 37 TKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKM----PH 92
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
+ ++ +L+ + +++ ++M E V + M+ R+G + EA D
Sbjct: 93 KDLFSWNLMLTGYARNRRLRDARMLFDSMP-----EKDVVSWNAMLSGYVRSGHVDEARD 147
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEI-AAKKLFE 487
+ + M K + + W LL A V G + A++LFE
Sbjct: 148 VFDRMPHK-NSISWNGLLAA-----YVRSGRLEEARRLFE 181
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/632 (38%), Positives = 363/632 (57%), Gaps = 71/632 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV N +I G E ++ F +M ++ P TFPC +K+CS + G
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ H A G +FV + L+ MY KCG LS+AR + DE+ +R ++VSW S++ GY
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR--DVVSWNSLVVGYA 217
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN +AL + +E S + D+ +AS+L A S T V
Sbjct: 218 QNQRFDDALEVCREM------------ESVKISHDAGTMASLLPAVSNTTTENVM----- 260
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+V + +F M +K V+WN +I +Y +N + E
Sbjct: 261 YV----------------------------KDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 292
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A++++ +M ++ + +AV++++VL A L LGK IH + + L ++++ ++I
Sbjct: 293 AVELYSRM-EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG ++ AR F MK ++V SWTAMI+ YG R +A+ LF K+ +G+ P+ I
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
FV+ L+ACSHAGL++EG M + I P +EH CMVDLLGRAGK+KEAY I+
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M ++ + VWG+LLGACR+H + D+G +AA KLF+L P GY+VLLSNIYA AGRWE+V
Sbjct: 472 MSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 531
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R++MK++ L K PG S VE+ +H FLVGD+ HPQ ++IY L+ L K++E+GYV
Sbjct: 532 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYV 591
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------------NLRVCGDCHT 609
D S +HDV++E+KE L +HSEKLA NLR+CGDCH
Sbjct: 592 PDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHV 651
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
+LIS++ REI++RD+ RFH F+ G+CSC
Sbjct: 652 AAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 186/416 (44%), Gaps = 54/416 (12%)
Query: 56 EALRAFSSMRKLSL---TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS 112
++ + SS+ KL L +P + F + D+ + + H + + + +
Sbjct: 20 QSRKVSSSLPKLELDQKSPQETVFLLG-QVLDTYPDIRTLRTVHSRIILEDLRCNSSLGV 78
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
L+ Y+ +++ ARK+FDEIP+ RN++ M+ YV N E + +F
Sbjct: 79 KLMRAYASLKDVASARKVFDEIPE--RNVIIINVMIRSYVNNGFYGEGVKVFGTM----- 131
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
CG NV D VL ACS + HG K G S + VGN L+
Sbjct: 132 -CGC------NVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSM 184
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
Y + G + +R V D M +D V+WNS++ YAQN +AL+V +M +S + +A T
Sbjct: 185 YGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM-ESVKISHDAGT 243
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
++++L A+++ E+V MY K F +M
Sbjct: 244 MASLLPAVSNTTT-----------------ENV--------MYVK--------DMFFKMG 270
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
+K++ SW MI Y + EA++L+ +M G P+ ++ SVL AC + G
Sbjct: 271 KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKK 330
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ + I P + ++D+ + G L++A D+ E MK + D V W +++ A
Sbjct: 331 IHGYIERKKLI-PNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISA 384
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 16/320 (5%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +I +G L+ AYA V +RKVFD + E++ + N +I Y NG
Sbjct: 62 HSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFY 121
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
E + VF M +V+ + T VL A + G + +G+ IH K+ L ++ VG
Sbjct: 122 GEGVKVFGTMC-GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ MY KCG + AR ++M ++V SW +++ GY + R +AL++ +M + +
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
T S+L A S+ E ++ M + + V + M+ + + EA +L
Sbjct: 241 AGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS-WNVMIGVYMKNAMPVEAVELY 297
Query: 451 EGMKV---KADFVVWGSLLGACRIHKNVDLGE-----IAAKKLFELEPNNCGYHVLLSNI 502
M+ + D V S+L AC + LG+ I KKL PN + L+ ++
Sbjct: 298 SRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI---PNLLLENALI-DM 353
Query: 503 YANAGRWEDVERTRSLMKNR 522
YA G E MK+R
Sbjct: 354 YAKCGCLEKARDVFENMKSR 373
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 253/725 (34%), Positives = 396/725 (54%), Gaps = 94/725 (12%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M + + S ++++S K +F+ +++V SW ++I + G +A++
Sbjct: 36 MPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSV-SWTTIIVGYNQMGRFEDAIKI 94
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F M K + PT+ T + SC+A GK+ H G H V V+++L++MY+K
Sbjct: 95 FVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAK 154
Query: 121 CGELSDARKLFDEIPQRI-----------------------------RNIVSWTSMLTGY 151
G+L A+ +FD + R R+IVSW SM+ G
Sbjct: 155 TGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGC 214
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
Q+ EAL F L + S + D ++AS LSAC+ + + H
Sbjct: 215 NQHGFDNEALQFFSSILKDTS-----------LKPDRFSLASALSACANLEKLSFGKQIH 263
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV-------------------------- 245
G++++ FD+ VGN LI YA+ G V+++R++
Sbjct: 264 GYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGD 323
Query: 246 -------FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
F+ + + D V W ++I Y QNGL +A++VF MV S + N+ TL+A+L
Sbjct: 324 ITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMV-SEGPRPNSFTLAAMLS 382
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE-KNVR 357
A + + L GK IH I+ S VG ++ MY K G ++ ARK FN +++ ++
Sbjct: 383 ASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTV 442
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SWT+MI H EA++LF +M+ G++P++IT+V VLSAC+H GLV++G + + M
Sbjct: 443 SWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLM 502
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
+ I+P + HY CMVDL GRAG L+EAY +E M ++ D + WGSLL +C+++KNVDL
Sbjct: 503 KNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDL 562
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG 537
++AA++L +EPNN G + L+N+Y++ G+W+D + R LMK R + K G S V+++
Sbjct: 563 AKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQN 622
Query: 538 KVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
K H F V D HPQ ++IY+ ++++ +++++G+ D SV+HD++ E K+ LR HSEK
Sbjct: 623 KTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEK 682
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA NLRVC DCH I+ ISK+VDREI+VRD+ RFH+FKDG CS
Sbjct: 683 LAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCS 742
Query: 640 CGDYW 644
C DYW
Sbjct: 743 CKDYW 747
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 64/253 (25%)
Query: 214 VIKRGFDSEVGVGNTLIDAYARGG-HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++K G V + N L++ YA+ G H+D + +F+ M K +WN+I++ YA+ G +
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLD-AHDLFNEMPVKTTFSWNTILSGYAKQGKLEK 59
Query: 273 ALDVFD------------------QMVKSTD------------VKCNAVTLSAVLLAIAH 302
A VFD QM + D V TL+ VL + A
Sbjct: 60 AHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAA 119
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK------------------------- 337
G +GK +H V+K+ L V V S+++MY K
Sbjct: 120 TGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAM 179
Query: 338 ------CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK-AGVRPN 390
CG+VDLA F + E+++ SW +MIAG H EAL F ++K ++P+
Sbjct: 180 ISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPD 239
Query: 391 YITFVSVLSACSH 403
+ S LSAC++
Sbjct: 240 RFSLASALSACAN 252
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 54/235 (22%)
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N+++ +YA+ G +A D+F++M T N
Sbjct: 14 NNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWN---------------------------- 45
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+I+ Y K G+++ A + F+ + ++ SWT +I GY R +A+
Sbjct: 46 ------------TILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIK 93
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCM 433
+F M+K V P T +VL++C+ G G + H F ++ G V +
Sbjct: 94 IFVDMVKDKVLPTQFTLTNVLASCAATG--SRG---IGKKVHSFVVKLGLHACVPVANSL 148
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
+++ + G LK A + + MK++ + W +++ +H N ++A + FEL
Sbjct: 149 LNMYAKTGDLKMAKVVFDRMKLR-NTSSWNAMIS---LHMNCGRVDLALAQ-FEL 198
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/666 (36%), Positives = 376/666 (56%), Gaps = 65/666 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + + N+F WN++I +R + + M + + P R TFP K +
Sbjct: 74 LFDE-IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDI 132
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+Q H G +VFV +AL+ MY CG+L AR +FD P+ ++++W +
Sbjct: 133 ALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA--DVITWNMI 190
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ Y + E+ LF ++E+ + V +V + VLSACS++
Sbjct: 191 ISAYNKVGKFEESRRLF--LVMEDKQ----------VLPTTVTLVLVLSACSKLKDLRTG 238
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYA-------------------------------RG 236
+ H +V +S + + N +ID YA
Sbjct: 239 KKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNL 298
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G +DV+R FD M EKD V+W ++I Y ++ EAL++F M ++T+VK + T+ +V
Sbjct: 299 GEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNM-QATNVKPDEFTMVSV 357
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A AHLG L LG+ I + + ++ + V ++IDMY KCG VD A F +M +++
Sbjct: 358 LTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDK 417
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+WTAMI G ++ +ALD+F M+KA + P+ IT++ VLSAC+H GLV +G +
Sbjct: 418 FTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLR 477
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M + IEP + HYGC+VDLL RAG+LKEAY++IE M +KA+ +VWG+LL CR+++ D
Sbjct: 478 MTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESD 537
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
+ E+ K++ ELEP+N +VLL NIYA RW D+ R +M ++ + KTPG SL+E+
Sbjct: 538 MAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMN 597
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
G+VH F+ GD+ HPQ + I L+++ L+ GY D++ V D+ +E+KE ++ HSE
Sbjct: 598 GRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSE 657
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLR+C DCH + +L+SKV +RE++VRD RFH+FK GLC
Sbjct: 658 KLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLC 717
Query: 639 SCGDYW 644
SC DYW
Sbjct: 718 SCKDYW 723
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 194/432 (44%), Gaps = 53/432 (12%)
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELS 125
S +P +++C ++ L +Q H QA G + + + + ++ + G+
Sbjct: 13 SFSPPTHPLISLLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQ 69
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
AR+LFDEIP+ N+ W +M+ GY + D + + L+ E L V
Sbjct: 70 YARRLFDEIPE--PNLFIWNTMIRGYSRLDFPQLGVSLYLEML------------RRGVK 115
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
D + +R HG V+K G V V L+ Y G +D +R V
Sbjct: 116 PDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGV 175
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD + D +TWN II+ Y + G E+ +F M + V VTL VL A + L
Sbjct: 176 FDVCPKADVITWNMIISAYNKVGKFEESRRLFLVM-EDKQVLPTTVTLVLVLSACSKLKD 234
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC--------------------------- 338
LR GK +H V +E ++++ ++IDMY C
Sbjct: 235 LRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSG 294
Query: 339 ----GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
G++D+AR F++M EK+ SWTAMI GY R +EAL+LF M V+P+ T
Sbjct: 295 FTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTM 354
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
VSVL+AC+H G ++ G W+ T I+ + ++D+ + G + +A + M
Sbjct: 355 VSVLTACAHLGALELG-EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS 413
Query: 455 VKADFVVWGSLL 466
+ F W +++
Sbjct: 414 QRDKF-TWTAMI 424
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 138/304 (45%), Gaps = 14/304 (4%)
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLID--AYARGGHVDVSRKVFD 247
+ S+L C + + H IK+G ++ + N ++ G +R++FD
Sbjct: 20 PLISLLETCESM---DQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFD 76
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ E + WN++I Y++ + ++ +M++ VK + T + L
Sbjct: 77 EIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRR-GVKPDRYTFPFLFKGFTRDIALE 135
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
G+ +H V+K L+ +V V T+++ MY CGQ+D AR F+ + +V +W +I+ Y
Sbjct: 136 YGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYN 195
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+ E+ LF M V P +T V VLSACS ++ G +++ +E +
Sbjct: 196 KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTG-KKVHSYVKNCKVESNL 254
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI-AAKKLF 486
M+D+ G++ A + M + D + W +++ +LGEI A+ F
Sbjct: 255 VLENAMIDMYADCGEMDSALGIFRSMNNR-DIISWTTIVSGF-----TNLGEIDVARNYF 308
Query: 487 ELEP 490
+ P
Sbjct: 309 DKMP 312
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/630 (38%), Positives = 370/630 (58%), Gaps = 33/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ N+ WN ++ + + ++ F M+ + P + T+P +++C++L L+ G
Sbjct: 423 TETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 482
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H GF +V+V S LIDMY+K G+L+ A ++ +P+ ++VSWT+M+ GYV
Sbjct: 483 EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPED--DVVSWTAMIAGYV 540
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+D EAL LF EE E G + D++ AS +SAC+ + + H
Sbjct: 541 QHDMFSEALQLF-----EEMEYRG-------IQFDNIGFASAISACAGIRALRQGQQIHA 588
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
GF +++ + N LI YAR G + + F+ + +K+ ++WNS+++ AQ+G E
Sbjct: 589 QSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEE 648
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL VF +M++ T+ + N T + + A A L ++ G+ IH V+K + V S+I
Sbjct: 649 ALQVFVRMLR-TEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLI 707
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+Y K G + A + FN M E+NV SW AMI GY H EAL LF +M G+ PN++
Sbjct: 708 SLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHV 767
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TFV VLSACSH GLV+EG + +M ++ P EHY C+VDLLGRAG+L A + I+
Sbjct: 768 TFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKE 827
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M + AD ++W +LL AC IHKN+++GE AA L ELEP + +VL+SNIYA + +W
Sbjct: 828 MPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHR 887
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+ +R LMK+ + K PG S +E++ VHAF GDK HP +IYEY+ LN + E+GYV
Sbjct: 888 DWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYV 947
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D S++++ +Q +K+ +HSEKLA NLRVC DCH I+ +
Sbjct: 948 QDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYV 1007
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+ +R I+VRD+ RFH+F G+CSC D+W
Sbjct: 1008 SKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 236/465 (50%), Gaps = 27/465 (5%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
+ S+V N +H +F++ +++ VFSWN +I + + F M
Sbjct: 96 IDSLVDNYFRHGDQHGAVKVFDENSNRS-VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEG 154
Query: 69 LTPTRSTFPCAIKSCSALH-DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
+TP TF +K+C + KQ H + F +GF V++ LID+YSK G + A
Sbjct: 155 ITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
+K+F+ I +++IV+W +M++G QN EA+LLF + ++ +F
Sbjct: 215 KKVFNCIC--MKDIVTWVAMISGLSQNGLEEEAILLFCDM------------HASEIFPT 260
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
++SVLSA +++ + + E H VIK GF SE V N L+ Y+R + + ++F
Sbjct: 261 PYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFS 320
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
M +D V++NS+I+ Q G + AL++F +M + +K + +T++++L A A +G L
Sbjct: 321 TMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC-LKPDCITVASLLSACASVGALH 379
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
G +H IK + +I+ S++D+Y KC V+ A K F + +N+ W M+ YG
Sbjct: 380 KGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYG 439
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
++ ++F +M G+ PN T+ S+L C+ G + +L H I+ G
Sbjct: 440 QLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGAL-----YLGEQIHTHVIKTGF 494
Query: 428 EH--YGC--MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ Y C ++D+ + G+L A ++ + + D V W +++
Sbjct: 495 QLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAG 538
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 196/401 (48%), Gaps = 22/401 (5%)
Query: 103 GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
GF + + +L+D Y + G+ A K+FDE R++ SW M+ +V + +
Sbjct: 88 GFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSN--RSVFSWNKMIHVFVAQKSNFQVFC 145
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC--SRVTVNGVTEGAHGFVIKRGFD 220
LF+ L E G + N A VL AC + N V + H GFD
Sbjct: 146 LFRRMLAE-----GITPN-------GYTFAGVLKACVGGDIAFNYVKQ-VHSRTFYYGFD 192
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
S V N LID Y++ G+++ ++KVF+ + KD VTW ++I+ +QNGL EA+ +F M
Sbjct: 193 SSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDM 252
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
++++ LS+VL A + + LG+ +H VIK V ++ +Y + +
Sbjct: 253 -HASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRK 311
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+ A + F+ M ++ S+ ++I+G + AL+LF KM + ++P+ IT S+LSA
Sbjct: 312 LISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371
Query: 401 CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
C+ G + +G L++ + + + G ++DL + ++ A+ + + + V
Sbjct: 372 CASVGALHKGMQ-LHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETE-NIV 429
Query: 461 VWGSLLGACRIHKNV-DLGEIAAKKLFE-LEPNNCGYHVLL 499
+W +L A N+ D EI + E + PN Y +L
Sbjct: 430 LWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSIL 470
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H + K GFD E + ++L+D Y R G + KVFD + +WN +I ++
Sbjct: 81 HCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSN 140
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV-LRLGKCIHDQVIKMDLEESVIVGT 329
+ +F +M+ + + N T + VL A + K +H + + S +V
Sbjct: 141 FQVFCLFRRML-AEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVAN 199
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+ID+Y K G ++ A+K FN + K++ +W AMI+G + EA+ LF M + + P
Sbjct: 200 LLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFP 259
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV--EHYGC--MVDLLGRAGKLKE 445
SVLSA + L + L H I+ G E Y C +V L R+ KL
Sbjct: 260 TPYVLSSVLSASTKIQLFE-----LGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLIS 314
Query: 446 AYDLIEGMKVKADFVVWGSLL 466
A + M + D V + SL+
Sbjct: 315 AERIFSTMNSR-DGVSYNSLI 334
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
+H ++ K + ++ S++D Y + G A K F++ ++V SW MI +
Sbjct: 80 LHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKS 139
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN--TMGHEFNIEPGVEH 429
+ LF +M+ G+ PN TF VL AC + ++ T + F+ P V +
Sbjct: 140 NFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVAN 199
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
++DL + G ++ A + + +K D V W +++
Sbjct: 200 --LLIDLYSKNGYIESAKKVFNCICMK-DIVTWVAMI 233
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 251/655 (38%), Positives = 367/655 (56%), Gaps = 38/655 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
++++S K + + +F+ ++ V SW ++ A G E+L+ + +M + +
Sbjct: 168 NALISMYAKCGSVRDARRVFDAMASRDEV-SWTTLTGAYAESGYGEESLKTYHAMLQERV 226
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P+R T+ + +C +L L GKQ H +H DV VS+AL MY KCG DAR+
Sbjct: 227 RPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDARE 286
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F+ + R++++W +M+ G+V + EA F L E V D
Sbjct: 287 VFECLS--YRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEE------------GVAPDRA 332
Query: 190 AIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
+VLSAC+R G+ G H K G S+V GN LI+ Y++ G + +R+VFD
Sbjct: 333 TYTTVLSACARP--GGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFD 390
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
M ++D V+W +++ YA E+ F QM++ VK N +T VL A ++ L+
Sbjct: 391 RMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQ-GVKANKITYMCVLKACSNPVALK 449
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
GK IH +V+K L + V +++ MY KCG V+ A + F M ++V +W +I G G
Sbjct: 450 WGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLG 509
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+ R EAL + M G+RPN TFV+VLSAC LV+EG M ++ I P
Sbjct: 510 QNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTE 569
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
+HY CMVD+L RAG L+EA D+I + +K +WG+LL ACRIH NV++GE AA+ +
Sbjct: 570 KHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLK 629
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
LEP N G +V LS IYA AG W DV + R MK R + K PG S +E+ G+VH+F+ D+
Sbjct: 630 LEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQ 689
Query: 548 EHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------- 599
HP+ ++IY LE L +++ +GYV D V+HD+D E KE + HSEKLA
Sbjct: 690 SHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLIST 749
Query: 600 ----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT + ISK+ REI+ RD+ RFH+FK+G CSCGDYW
Sbjct: 750 PPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 200/388 (51%), Gaps = 17/388 (4%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++SC DL GKQ H+ G +V++++ L+ +Y+ CG +++AR+LFD+ +
Sbjct: 35 LQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSN--K 92
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++VSW M++GY A+EA LF E E D S+LSACS
Sbjct: 93 SVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLE------------PDKFTFVSILSACS 140
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
V H V++ G ++ VGN LI YA+ G V +R+VFD M +D V+W +
Sbjct: 141 SPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTT 200
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+ YA++G E+L + M++ V+ + +T VL A L L GK IH +++
Sbjct: 201 LTGAYAESGYGEESLKTYHAMLQER-VRPSRITYMNVLSACGSLAALEKGKQIHAHIVES 259
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
+ V V T++ MY KCG AR+ F + ++V +W MI G+ + EA F
Sbjct: 260 EYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTF 319
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
++M++ GV P+ T+ +VLSAC+ G + G ++ + + V ++++ +
Sbjct: 320 HRMLEEGVAPDRATYTTVLSACARPGGLARGKE-IHARAAKDGLVSDVRFGNALINMYSK 378
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLG 467
AG +K+A + + M K D V W +LLG
Sbjct: 379 AGSMKDARQVFDRMP-KRDVVSWTTLLG 405
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 226/449 (50%), Gaps = 36/449 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K+ +K+ V SWN +I+ A G + EA F+ M++ L P + TF + +CS+
Sbjct: 85 LFDKFSNKS-VVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPA 143
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L+ G++ H + G D V +ALI MY+KCG + DAR++FD + R+ VSWT++
Sbjct: 144 VLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMAS--RDEVSWTTL 201
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
Y ++ E+L + L E V + +VLSAC +
Sbjct: 202 TGAYAESGYGEESLKTYHAMLQE------------RVRPSRITYMNVLSACGSLAALEKG 249
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H +++ + S+V V L Y + G +R+VF+ + +D + WN++I + +
Sbjct: 250 KQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDS 309
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EA F +M++ V + T + VL A A G L GK IH + K L V
Sbjct: 310 GQLEEAHGTFHRMLEE-GVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRF 368
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G ++I+MY K G + AR+ F++M +++V SWT ++ Y + E+ F +M++ GV
Sbjct: 369 GNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGV 428
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDL---------LG 438
+ N IT++ VL ACS+ V W G E + E V G + DL
Sbjct: 429 KANKITYMCVLKACSNP--VALKW------GKEIHAE--VVKAGLLADLAVTNALMSMYF 478
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+ G +++A + EGM ++ D V W +L+G
Sbjct: 479 KCGSVEDAIRVFEGMSMR-DVVTWNTLIG 506
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 144/281 (51%), Gaps = 3/281 (1%)
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
VDS +L +C + V + H +++ G V + NTL+ YA G V+ +R++
Sbjct: 26 VDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQL 85
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD K V+WN +I+ YA GLA EA ++F M + ++ + T ++L A + V
Sbjct: 86 FDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLM-QQERLEPDKFTFVSILSACSSPAV 144
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L G+ IH +V++ L VG ++I MY KCG V AR+ F+ M ++ SWT +
Sbjct: 145 LNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGA 204
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y E+L ++ M++ VRP+ IT+++VLSAC +++G ++ E
Sbjct: 205 YAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQ-IHAHIVESEYHS 263
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V + + + G K+A ++ E + + D + W +++
Sbjct: 264 DVRVSTALTKMYMKCGAFKDAREVFECLSYR-DVIAWNTMI 303
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/687 (35%), Positives = 384/687 (55%), Gaps = 66/687 (9%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
K S SS +NT TTL + ++ I L + EAL+ +
Sbjct: 9 KPSHSSSPFQPKTFFKSNTKDTTLVPHLCNHKR---FDEAIHILCQQNRLKEALQILHQI 65
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
K P+ S + I+SC L GK+ HQ + GF +F+ + L++MY+KC L
Sbjct: 66 DK----PSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSL 121
Query: 125 SDARKLFDEIPQRI-----------------------------RNIVSWTSMLTGYVQND 155
D++KLFDE+P+R R+ SWT+M++GYV++D
Sbjct: 122 MDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHD 181
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
EAL LF+ + SDN + ++S L+A + V + + HG+++
Sbjct: 182 RPNEALELFRMM-----------KRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIM 230
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+ G DS+ V + L D Y + G ++ +R +FD M+++D VTW ++I Y Q+G E D
Sbjct: 231 RTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFD 290
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F +++S ++ N T S VL A A+ LGK +H + ++ + ++++ MY
Sbjct: 291 LFADLLRS-GIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMY 349
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG + A + F + + ++ SWT++IAGY + + EA+ F ++K+G +P++ITFV
Sbjct: 350 SKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFV 409
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
VLSAC+HAGLV +G + +++ ++ + +HY C++DLL R+G+ EA ++I M +
Sbjct: 410 GVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSM 469
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
K D +W SLLG CRIH N+ L + AA+ LFE+EP N +V L+NIYA AG W +V +
Sbjct: 470 KPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKI 529
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
R M +R + K PG S + ++ VH FLVGD HP+ ++I E+L +L+ +++E G+V D
Sbjct: 530 RKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDT 589
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
V+HDV+ E+KE L HSEKLA NLR C DCHT I+ ISK+
Sbjct: 590 NFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKI 649
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
+R+I+VRDS RFH+F+DG CSC DYW
Sbjct: 650 TNRKIIVRDSNRFHFFEDGHCSCRDYW 676
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/638 (37%), Positives = 368/638 (57%), Gaps = 39/638 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K +N V SW S+I A EAL +F MR T+ +++C++L
Sbjct: 132 LFDKMSQRNMV-SWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLG 190
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G Q H GF ++FV S L DMYSKCGELSDA K F+E+P ++ V WTSM
Sbjct: 191 AIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMP--CKDAVLWTSM 248
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+V+N + ++AL + + + +D+VF+D + S LSACS + +
Sbjct: 249 IDGFVKNGDFKKALTAYMKMV------------TDDVFIDQHVLCSTLSACSALKASSFG 296
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI---Y 264
+ H ++K GF+ E +GN L D Y++ G + + VF I D ++ S+ AI Y
Sbjct: 297 KSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQ--IHSDCISIVSLTAIIDGY 354
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
+ +AL F + + ++ N T ++++ A A+ L G +H QV+K + +
Sbjct: 355 VEMDQIEKALSTFVDL-RRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRD 413
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V ++++DMY KCG D + + F++++ + +W ++ + H R A++ F MI
Sbjct: 414 PFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIH 473
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
G++PN +TFV++L CSHAG+V++G ++ ++M + + P EHY C++DLLGRAGKLK
Sbjct: 474 RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLK 533
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
EA D I M + + W S LGAC+IH +++ + AA KL +LEP N G HVLLSNIYA
Sbjct: 534 EAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYA 593
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
+WEDV+ R ++K+ + K PG+S V++R K H F V D HPQ ++IYE L+ L
Sbjct: 594 KEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLD 653
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
+++ +GYV SV+ D+D KE L HSE++A NLRVC D
Sbjct: 654 QIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSD 713
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH+ ++ ISKV +R I+VRD RFH+F +G CSCGDYW
Sbjct: 714 CHSALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 206/413 (49%), Gaps = 21/413 (5%)
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F S KLS T T + I++ + +L+ GKQ H G + F+S+ +++YSK
Sbjct: 66 FGSGHKLSDTKTVAHL---IQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSK 122
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CGEL KLFD++ Q RN+VSWTS++TG+ N +EAL F + +E
Sbjct: 123 CGELDYTIKLFDKMSQ--RNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGE-------- 172
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
A++SVL AC+ + H V+K GF E+ VG+ L D Y++ G +
Sbjct: 173 ----IATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELS 228
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+ K F+ M KDAV W S+I + +NG +AL + +MV + DV + L + L A
Sbjct: 229 DACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMV-TDDVFIDQHVLCSTLSAC 287
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE-KNVRSW 359
+ L GK +H ++K+ E +G ++ DMY K G + A F + ++ S
Sbjct: 288 SALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSL 347
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
TA+I GY + +AL F + + G+ PN TF S++ AC++ ++ G L+
Sbjct: 348 TAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQ-LHGQVV 406
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+FN + +VD+ G+ G + L + ++ D + W +L+G H
Sbjct: 407 KFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLVGVFSQH 458
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 169/374 (45%), Gaps = 35/374 (9%)
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D+ +A ++ +R + H +I+ G + N ++ Y++ G +D + K+F
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D M +++ V+W SII +A N EAL F QM ++ LS+VL A LG +
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEI-ATQFALSSVLQACTSLGAI 192
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
+ G +H V+K + VG+++ DMY KCG++ A KAF +M K+ WT+MI G+
Sbjct: 193 QFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGF 252
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGWHWLN 415
+ ++AL + KM+ V + S LSACS HA +++ G+ +
Sbjct: 253 VKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYET 312
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
+G+ + D+ ++G + A ++ + + +D + SL + +
Sbjct: 313 FIGN------------ALTDMYSKSGDMVSASNVFQ---IHSDCISIVSLTAIIDGYVEM 357
Query: 476 DLGEIAAKKLFEL-----EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
D E A +L EPN + L+ AN + E + + + P
Sbjct: 358 DQIEKALSTFVDLRRRGIEPNEFTFTSLIKAC-ANQAKLEHGSQLHGQVVKFNFKRDPFV 416
Query: 531 S--LVELRGKVHAF 542
S LV++ GK F
Sbjct: 417 SSTLVDMYGKCGLF 430
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 111/265 (41%), Gaps = 28/265 (10%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ +F + D ++ S ++I +AL F +R+ + P TF IK+C+
Sbjct: 332 SNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACAN 391
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L G Q H Q F F RD FVSS L+DMY KCG + +LFDEI + ++W
Sbjct: 392 QAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIEN--PDEIAWN 449
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV-- 203
+++ + Q+ R A+ F + G N +V ++L CS +
Sbjct: 450 TLVGVFSQHGLGRNAIETFNGMIHR-----GLKPN-------AVTFVNLLKGCSHAGMVE 497
Query: 204 NGVT-----EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTW 257
+G+ E +G V K S V ID R G + + + M E + W
Sbjct: 498 DGLNYFSSMEKIYGVVPKEEHYSCV------IDLLGRAGKLKEAEDFINNMPFEPNVFGW 551
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVK 282
S + +G A D+++K
Sbjct: 552 CSFLGACKIHGDMERAKFAADKLMK 576
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/654 (37%), Positives = 383/654 (58%), Gaps = 38/654 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S++S + K + +F+ +K++V SWNS+IA G +EA F++M+
Sbjct: 242 NSLISMLSKSGMLRDARVVFDNMENKDSV-SWNSMIAGHVINGQDLEAFETFNNMQLAGA 300
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
PT +TF IKSC++L +L + H + G + V +AL+ +KC E+ DA
Sbjct: 301 KPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFS 360
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
LF + ++++VSWT+M++GY+QN + +A+ LF E G N
Sbjct: 361 LFS-LMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRRE-----GVKPNH-------F 407
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
+++L+ V ++ + H VIK ++ VG L+DA+ + G++ + KVF+ +
Sbjct: 408 TYSTILTVQHAVFISEI----HAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELI 463
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA-IAHLGVLRL 308
KD + W++++A YAQ G EA +F Q+ + +K N T +++ A A +
Sbjct: 464 ETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTRE-GIKPNEFTFCSIINACTAPTASVEQ 522
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK H IK+ L ++ V +S++ +Y K G ++ A + F + KE+++ SW +MI+GY
Sbjct: 523 GKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQ 582
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H +A++AL++F +M K + + ITF+ V+SAC+HAGLV +G ++ N M ++ +I P +E
Sbjct: 583 HGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTME 642
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HY CM+DL RAG L +A D+I GM VW +L A R+H+N++LG++AA+K+ L
Sbjct: 643 HYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISL 702
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
EP + +VLLSNIYA AG W + R LM RR+ K PG+S +E++ K ++FL GD
Sbjct: 703 EPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLS 762
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
HP + IY L ELN +L++VGY D V HD++ E+KE L HSE+LA
Sbjct: 763 HPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATL 822
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH+ I+L+S V R IVVRDS RFH+FK GLCSCGDYW
Sbjct: 823 PEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 153/561 (27%), Positives = 263/561 (46%), Gaps = 53/561 (9%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N ++ +R + EAL F S+ + L+P T C + C+ + G+Q H Q
Sbjct: 71 NQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVK 130
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
G + V ++L+DMY+K G + D R++FDE+ R++VSW S+LTGY N +
Sbjct: 131 CGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGD--RDVVSWNSLLTGYSWNRFNDQVW 188
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
LF +E D +++V++A + + H V+K GF++
Sbjct: 189 ELFCLMQVEGYR------------PDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFET 236
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
E V N+LI ++ G + +R VFD M KD+V+WNS+IA + NG EA + F+ M
Sbjct: 237 ERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNM- 295
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ K T ++V+ + A L L L + +H + +K L + V T+++ KC ++
Sbjct: 296 QLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEI 355
Query: 342 DLARKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
D A F+ M ++V SWTAMI+GY + +A++LF M + GV+PN+ T+ ++L+
Sbjct: 356 DDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTV 415
Query: 401 CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
HA + E ++ + N E ++D + G + +A + E ++ K D +
Sbjct: 416 -QHAVFISE----IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETK-DVI 469
Query: 461 VWGSLLGACRIHKNVDLGEIAAKKLFEL-----EPNNCGYHVLLSNIYANAGRWEDVERT 515
W ++L + E AAK +L +PN + +++ A E ++
Sbjct: 470 AWSAMLAG---YAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQF 526
Query: 516 RSLMKNRRL--AKTPGFSLVEL---RGKV------------------HAFLVGDKEHPQH 552
+ RL A SLV L RG + ++ + G +H Q
Sbjct: 527 HAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQA 586
Query: 553 EKIYEYLEELNVKLQEVGYVT 573
+K E EE+ + EV +T
Sbjct: 587 KKALEVFEEMQKRNLEVDAIT 607
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 220/453 (48%), Gaps = 36/453 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLA--RGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+F++ D++ V SWNS++ + R D V L F M+ P T I + +
Sbjct: 159 VFDEMGDRD-VVSWNSLLTGYSWNRFNDQVWEL--FCLMQVEGYRPDYYTVSTVIAALAN 215
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ G Q H GF + V ++LI M SK G L DAR +FD + ++ VSW
Sbjct: 216 QGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMEN--KDSVSWN 273
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
SM+ G+V N EA F L ++ A+ ASV+ +C+ + G
Sbjct: 274 SMIAGHVINGQDLEAFETFNNMQLAGAKPTHAT------------FASVIKSCASLKELG 321
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWNSIIAIY 264
+ H +K G + V L+ A + +D + +F M + V+W ++I+ Y
Sbjct: 322 LVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGY 381
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
QNG +A+++F M + VK N T S + L + H + IH +VIK + E+S
Sbjct: 382 LQNGDTDQAVNLFSLM-RREGVKPNHFTYSTI-LTVQHAVFI---SEIHAEVIKTNYEKS 436
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
VGT+++D + K G + A K F ++ K+V +W+AM+AGY EA +F+++ +
Sbjct: 437 SSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTR 496
Query: 385 AGVRPNYITFVSVLSACS-HAGLVQEGWHWLNTMGHEFNIEPGVEHYGC----MVDLLGR 439
G++PN TF S+++AC+ V++G + H + I+ + + C +V L +
Sbjct: 497 EGIKPNEFTFCSIINACTAPTASVEQGKQF-----HAYAIKLRLNNALCVSSSLVTLYAK 551
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G ++ A+++ + K + D V W S++ H
Sbjct: 552 RGNIESAHEIFKRQKER-DLVSWNSMISGYAQH 583
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 187/384 (48%), Gaps = 34/384 (8%)
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
A++LFD+ P +R++ +L Y + D +EAL LF S +
Sbjct: 55 AQQLFDQTP--LRDLKQHNQLLFRYSRCDQTQEALHLF------------VSLYRSGLSP 100
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
DS ++ VLS C+ V E H +K G + VGN+L+D Y + G+V R+VF
Sbjct: 101 DSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVF 160
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D M ++D V+WNS++ Y+ N + ++F M + + + T+S V+ A+A+ G +
Sbjct: 161 DEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLM-QVEGYRPDYYTVSTVIAALANQGAV 219
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
+G IH V+K+ E +V S+I M K G + AR F+ M+ K+ SW +MIAG+
Sbjct: 220 AIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGH 279
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
++ + EA + F M AG +P + TF SV+ +C A L + G L + H ++ G
Sbjct: 280 VINGQDLEAFETFNNMQLAGAKPTHATFASVIKSC--ASLKELG---LVRVLHCKTLKSG 334
Query: 427 VE-HYGCMVDLLGRAGKLKE---AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
+ + + L+ K KE A+ L M V W +++ + + D A
Sbjct: 335 LSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTD----QA 390
Query: 483 KKLFEL------EPNNCGYHVLLS 500
LF L +PN+ Y +L+
Sbjct: 391 VNLFSLMRREGVKPNHFTYSTILT 414
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 130/261 (49%), Gaps = 17/261 (6%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
KSSSV + + + N + + ++ +V +W++++A A+ G++ EA + F +
Sbjct: 435 KSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQL 494
Query: 65 RKLSLTPTRSTFPCAIKSCSA-LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
+ + P TF I +C+A + GKQ H A + + VSS+L+ +Y+K G
Sbjct: 495 TREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGN 554
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ A ++F Q+ R++VSW SM++GY Q+ A++AL +F+E N
Sbjct: 555 IESAHEIFKR--QKERDLVSWNSMISGYAQHGQAKKALEVFEEM------------QKRN 600
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK-RGFDSEVGVGNTLIDAYARGGHVDVS 242
+ VD++ V+SAC+ + G + +I + + + +ID Y+R G + +
Sbjct: 601 LEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKA 660
Query: 243 RKVFDGMIEKDAVT-WNSIIA 262
+ +GM A T W ++A
Sbjct: 661 MDIINGMPFPPAATVWRIVLA 681
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 257/662 (38%), Positives = 370/662 (55%), Gaps = 61/662 (9%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SW ++++ A+ G + +++ F +M + P + + S L H
Sbjct: 302 DVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLH 361
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
GF+ +VFV ++LI++YSKCG L DA KLF + +R++V W+SM+ Y +
Sbjct: 362 GYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGM--IVRDVVIWSSMIAAYGIHGR 419
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT-----VNGVTEGAH 211
EAL +F + + G + V +++C+ T V AH
Sbjct: 420 GGEALEIFDQMI---QVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAH 476
Query: 212 G-------------------------FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
F +DS + ++ Y +D + VF
Sbjct: 477 FRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIM--YVSFNRIDAASIVF 534
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK------STDVKCNAVTLSAVLLAI 300
+ + + WN +I +A +G +L+++ +M++ ++ V N V++ +VLLA
Sbjct: 535 EDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLAC 594
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
+LG LR G+ H VI+ E ++V T+I+DMY KCG +DLAR F++ K++ W+
Sbjct: 595 GNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWS 654
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
AMIA YG+H R+A+DLF +M+KAGVRP+++TF VLSACSH+GL++EG + M E
Sbjct: 655 AMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEE 714
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
F I + +Y CMVDLLGRAG+L EA DLIE M V+ D +WGSLLGACRIH N+DL E
Sbjct: 715 FVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEK 774
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
A LF L+P + GYHVLLSNIYA RW +VE+ R +M R K GFSLVE +VH
Sbjct: 775 IADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVH 834
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA- 599
F VGD+ HPQ EK+Y LEEL ++ +GYV V+HD+++E KE L HSE+LA
Sbjct: 835 KFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAI 894
Query: 600 -----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
NLR+CGDCH I+LISK+V+R I+VRD RFH F+DG+CSCGD
Sbjct: 895 AFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGD 954
Query: 643 YW 644
YW
Sbjct: 955 YW 956
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 197/378 (52%), Gaps = 41/378 (10%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
NV WNS + R E LR F M P T P A+K+C+ L L GK
Sbjct: 66 NVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVI 125
Query: 96 HQQAFIFGFHR-------DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
H GF + D+FV SAL+++YSKCG++ +A K+F+E QR + V WTSM+
Sbjct: 126 H------GFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEF-QR-PDTVLWTSMV 177
Query: 149 TGYVQNDNAREALLLFKEFLLEESECG---------------GASENSDNVFVDSVAIAS 193
TGY QN++ EAL LF + ++ + G G + + N+F +
Sbjct: 178 TGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLF-SKMPEKD 236
Query: 194 VLSACSRVTVNGVTEGA-------HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
V+S + + E A H + KR + V V + L A A +++ +K+
Sbjct: 237 VISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSAL-QACAVSRNLEEGKKIH 295
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ KD V+W ++++ YAQNG+A +++ VF M+ S ++ +AV + +L A + LG+
Sbjct: 296 KIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNML-SDGIQPDAVAVVKILAASSELGIF 354
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
+ C+H V++ +V VG S+I++Y KCG + A K F M ++V W++MIA Y
Sbjct: 355 QQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAY 414
Query: 367 GMHCRAREALDLFYKMIK 384
G+H R EAL++F +MI+
Sbjct: 415 GIHGRGGEALEIFDQMIQ 432
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 135/543 (24%), Positives = 235/543 (43%), Gaps = 109/543 (20%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
V+S+++ K LF+K +K+ V SW+++IA A + EAL F M +
Sbjct: 209 VNSLLNLYAKTGCEKIAANLFSKMPEKD-VISWSTMIACYANNEAANEALNLFHEMIEKR 267
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
P T A+++C+ +L GK+ H+ A
Sbjct: 268 FEPNSVTVVSALQACAVSRNLEEGKKIHKIAV---------------------------- 299
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
+++VSW ++L+GY QN A +++ +F+ L SD + D+
Sbjct: 300 ---------WKDVVSWVALLSGYAQNGMAYKSMGVFRNML------------SDGIQPDA 338
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
VA+ +L+A S + + HG+V++ GF+S V VG +LI+ Y++ G + + K+F G
Sbjct: 339 VAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKG 398
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD--VKCNAVTLSAVL---LAI--- 300
MI +D V W+S+IA Y +G EAL++FDQM++ C +++ + LAI
Sbjct: 399 MIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSC 458
Query: 301 ----------------AHLGVL------------RLGKCIHDQVIKMDLEESVIVGTSII 332
AH L + + L+ + T
Sbjct: 459 TLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFA 518
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR---- 388
MY ++D A F + W MI G+ R +L+L+ KM++ G++
Sbjct: 519 IMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNS 578
Query: 389 ---PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAG 441
PN ++ +SVL AC + G +++G W H + I+ G E ++D+ + G
Sbjct: 579 GVIPNRVSILSVLLACGNLGALRKG-EWF----HSYVIQTGFEFDILVATAIMDMYSKCG 633
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGACRIH----KNVDLGEIAAKKLFELEPNNCGYHV 497
L A L + K D V W +++ + IH K +DL + K + P++ +
Sbjct: 634 SLDLARCLFDETAGK-DLVCWSAMIASYGIHGHGRKAIDLFDQMVKA--GVRPSHVTFTC 690
Query: 498 LLS 500
+LS
Sbjct: 691 VLS 693
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 146/321 (45%), Gaps = 49/321 (15%)
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
S Q H Q F G D F ++ L +Y+KC L ARK+FDE P N+ W S L
Sbjct: 19 SVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPH--PNVHLWNSTLRS 76
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y + E L LF + E D+ I L AC+ + + + +
Sbjct: 77 YCREKQWEETLRLFHLMICTAGEAP-----------DNFTIPIALKACAGLRMLELGKVI 125
Query: 211 HGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HGF K S++ VG+ L++ Y++ G + + KVF+ D V W S++ Y QN
Sbjct: 126 HGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNND 185
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EAL +F QMV + C L V
Sbjct: 186 PEEALALFSQMVM---MDCFDGDLPLV--------------------------------N 210
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
S++++Y K G +A F++M EK+V SW+ MIA Y + A EAL+LF++MI+ P
Sbjct: 211 SLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEP 270
Query: 390 NYITFVSVLSACSHAGLVQEG 410
N +T VS L AC+ + ++EG
Sbjct: 271 NSVTVVSALQACAVSRNLEEG 291
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 121/274 (44%), Gaps = 10/274 (3%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H V K G + L YA+ + +RKVFD + WNS + Y +
Sbjct: 24 HSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQW 83
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGT 329
E L +F M+ + + T+ L A A L +L LGK IH K D + + VG+
Sbjct: 84 EETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGS 143
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+++++Y KCGQ+ A K F + + + WT+M+ GY + EAL LF +M+
Sbjct: 144 ALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFD 203
Query: 390 NYITFV-SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
+ V S+L+ + G + + + M E V + M+ EA +
Sbjct: 204 GDLPLVNSLLNLYAKTGCEKIAANLFSKMP-----EKDVISWSTMIACYANNEAANEALN 258
Query: 449 LIEGM---KVKADFVVWGSLLGACRIHKNVDLGE 479
L M + + + V S L AC + +N++ G+
Sbjct: 259 LFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGK 292
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
+H QV K + T + +Y KC + ARK F++ NV W + + Y +
Sbjct: 23 LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82
Query: 372 AREALDLFYKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF---NIEPGV 427
E L LF+ MI AG P+ T L AC+ +++ L + H F N E G
Sbjct: 83 WEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLE-----LGKVIHGFAKKNDEIGS 137
Query: 428 EHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ + +V+L + G++ EA + E + + D V+W S++
Sbjct: 138 DMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMV 177
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/559 (44%), Positives = 347/559 (62%), Gaps = 48/559 (8%)
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ---NDNAREALLLFK 165
F+ + LI+MY K G L DA+ +FD++P R N+VSWT+M++ Y ND A E L+L
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDR--NVVSWTTMISAYSAAKLNDKALEFLVL-- 56
Query: 166 EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV--TEGAHGFVIKRGFDSEV 223
+L E N+F S SVL AC +G+ H +IK G DS+V
Sbjct: 57 --MLREGV-------RPNMFTYS----SVLRAC-----DGLFNLRQLHCCIIKIGLDSDV 98
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
V + LID Y+R G ++ + +VFD M+ D V W+SIIA +AQN EAL +F +M K
Sbjct: 99 FVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRM-KR 157
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL 343
TL++VL A L +L LG+ +H V+K D + +I+ +++DMYCKCG ++
Sbjct: 158 AGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLED 215
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
A F +M EK+V SW+ MIAG + ++EAL LF M G++PNY+T V VL ACSH
Sbjct: 216 ANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSH 275
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWG 463
AGLV+EG ++ ++M F I+PG EHYGCM+DLLGRAG+L EA DLI M+ + D V W
Sbjct: 276 AGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWR 335
Query: 464 SLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRR 523
+LL ACR+H+NVD+ AAK++ L+P + G +VLLSNIYAN RW DV R M NR
Sbjct: 336 ALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRG 395
Query: 524 LAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVD 583
+ K PG S +E+ ++HAF++GD+ HPQ +I L +L KL VGYV D V+ D++
Sbjct: 396 IKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLE 455
Query: 584 QEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVR 625
E+ + +LR HSEKLA NLR+CGDCH +L++K+ R IV+R
Sbjct: 456 GEQMQDSLRYHSEKLAIVFGLMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIR 515
Query: 626 DSKRFHYFKDGLCSCGDYW 644
D R+H+F+DGLCSCGD+W
Sbjct: 516 DPVRYHHFQDGLCSCGDFW 534
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 179/353 (50%), Gaps = 27/353 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K D+N V SW ++I+ + + +AL M + + P T+ +++C L
Sbjct: 22 VFDKMPDRN-VVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGLF 80
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L +Q H G DVFV SALID+YS+ GEL +A ++FDE+ ++V W+S+
Sbjct: 81 NL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVT--GDLVVWSSI 135
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ QN + EAL LFK + SVL AC+ + + +
Sbjct: 136 IAGFAQNSDGDEALRLFKRM------------KRAGFLAQQTTLTSVLRACTGLALLELG 183
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H V+K +D ++ + N L+D Y + G ++ + VF M+EKD ++W+++IA AQN
Sbjct: 184 RQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQN 241
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVI 326
G + EAL +F+ M K +K N VT+ VL A +H G++ G H ++
Sbjct: 242 GYSKEALKLFESM-KVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGRE 300
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
+ID+ + G++ A N+M+ E + +W A++ CR +D+
Sbjct: 301 HYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNA----CRVHRNVDV 349
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 125/242 (51%), Gaps = 23/242 (9%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N +F++ V ++ W+S+IA A+ D EALR F M++ ++T +++C
Sbjct: 116 NALRVFDEMV-TGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRAC 174
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ L L G+Q H + + +D+ +++AL+DMY KCG L DA +F + + ++++S
Sbjct: 175 TGLALLELGRQVH--VHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVE--KDVIS 230
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W++M+ G QN ++EAL LF E + G N V I VL ACS +
Sbjct: 231 WSTMIAGLAQNGYSKEALKLF-----ESMKVLGIKPN-------YVTIVGVLFACSHAGL 278
Query: 204 NGVTEGAHGF-VIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNS 259
V EG + F +K F + G + +ID R G + + + + M E DAVTW +
Sbjct: 279 --VEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRA 336
Query: 260 II 261
++
Sbjct: 337 LL 338
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 258/666 (38%), Positives = 366/666 (54%), Gaps = 80/666 (12%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLT-----TLFNKYVDKNNVFSWNSVIADLARGGDSVEA 57
L S S+V + STN L+ +F+ +V K NVF WN +I + +A
Sbjct: 63 LQDSYIAGSLVKSYANVSTNRYLSFESSLRVFD-FVRKPNVFLWNCMIKVCIENNEPFKA 121
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM 117
+ + M P + T+P +K+CS + G Q H G D + S+ I M
Sbjct: 122 ILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRM 181
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
Y+ G L +AR++ D+ + + V W +M+ GY L F E
Sbjct: 182 YASFGRLVEARRILDDKGGEV-DAVCWNAMIDGY----------LRFGEV---------- 220
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
+R G+ + S + N +I ++R G
Sbjct: 221 -------------------EAARELFEGMPD-----------RSMISTWNAMISGFSRCG 250
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
V+V+R+ FD M E+D ++W+++I Y Q G EAL++F QM K ++ L +VL
Sbjct: 251 MVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKE-KIRPRKFVLPSVL 309
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A A+LG L G+ IH + ++ ++GTS++DMY KCG++DLA + F +M K V
Sbjct: 310 SACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 369
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SW AMI G MH RA +A+DLF KM + PN ITFV VL+AC+H GLVQ+G N+M
Sbjct: 370 SWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSM 426
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
E+ +EP +EHYGC+VDLLGRAG L EA ++ + + VWG+LLGACR H NV+L
Sbjct: 427 RKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVEL 486
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVEL-R 536
GE K L ELEP N G + LLSNIYA AGRWE+V R LMK R + TPG S+++L R
Sbjct: 487 GERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGR 546
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
G+VH F++GD HPQ + IY+ L+++ +LQ GY D + V+ D+D+EEKE + HSE
Sbjct: 547 GEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSE 606
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLRVC DCH+ +LIS+V +REI+VRD R+H+F++G C
Sbjct: 607 KLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGAC 666
Query: 639 SCGDYW 644
SC D+W
Sbjct: 667 SCKDFW 672
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 138/332 (41%), Gaps = 72/332 (21%)
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYA-----RGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
AH +++ G + + +L+ +YA R + S +VFD + + + WN +I +
Sbjct: 53 AHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVC 112
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
+N +A+ ++ +M+ + + N T AVL A + GV+ G +H ++K L
Sbjct: 113 IENNEPFKAILLYYEMMVA-HFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGD 171
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFN-QMKEKNVRSWTAMIAGY--------------GMH 369
+ +S I MY G++ AR+ + + E + W AMI GY GM
Sbjct: 172 GHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMP 231
Query: 370 CR---------------------AREALD----------------------------LFY 380
R ARE D +F+
Sbjct: 232 DRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFH 291
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+M K +RP SVLSAC++ G + +G W++T +I+ +VD+ +
Sbjct: 292 QMQKEKIRPRKFVLPSVLSACANLGALDQG-RWIHTYAKRNSIQLDGVLGTSLVDMYAKC 350
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G++ A+++ E M K + W +++G +H
Sbjct: 351 GRIDLAWEVFEKMSNK-EVSSWNAMIGGLAMH 381
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 39/214 (18%)
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG-----QVDLARK 346
T S L AH +LR G L++S I G S++ Y + + +
Sbjct: 44 TTSLHHLKQAHALILRTGH----------LQDSYIAG-SLVKSYANVSTNRYLSFESSLR 92
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F+ +++ NV W MI + +A+ L+Y+M+ A RPN T+ +VL ACS AG+
Sbjct: 93 VFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGV 152
Query: 407 VQEG--------WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
V EG H L GH + + + G+L EA +++ + D
Sbjct: 153 VAEGVQVHAHLVKHGLGGDGHILS---------SAIRMYASFGRLVEARRILDDKGGEVD 203
Query: 459 FVVWGSLLGACRIHKNVDLGEI-AAKKLFELEPN 491
V W ++ I + GE+ AA++LFE P+
Sbjct: 204 AVCWNAM-----IDGYLRFGEVEAARELFEGMPD 232
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/644 (39%), Positives = 362/644 (56%), Gaps = 56/644 (8%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS---TFPCAIKSCSALHDLHSGKQAHQ 97
W I A G +A+ F MR S P S + P A+KSC+AL G H
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRA-SAAPRSSVPASLPAALKSCAALGLSALGASLHA 74
Query: 98 QAFIFGFHRDVFVSSALIDMYSK--CGELSDA-----------------RKLFDEIPQRI 138
A G D F ++AL+++Y K C L RK+FDE+ +R
Sbjct: 75 LAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIER- 133
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
++VSW +++ G + EAL ++ E DS +++VL
Sbjct: 134 -DVVSWNTLVLGCAEEGRHHEALGFVRKMCRE------------GFRPDSFTLSTVLPIF 180
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ HGF + GFDS+V VG++LID YA D S KVFD + +D + WN
Sbjct: 181 AECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWN 240
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
S++A AQNG EAL +F +M+++ V+ VT S+++ +L LR GK +H VI
Sbjct: 241 SLLAGCAQNGSVEEALGIFRRMLQA-GVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIC 299
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
E++V + +S+IDMYCKCG++ +A F++M +V SWTAMI GY +H AREAL L
Sbjct: 300 GGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVL 359
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
F +M +PN+ITF++VL+ACSHAGLV +GW + +M + + I P +EH+ + D LG
Sbjct: 360 FERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLG 419
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVL 498
RAG+L EAY+ I M++K VW +LL ACR+HKN L E AKK+ ELEP + G HV+
Sbjct: 420 RAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVV 479
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEY 558
LSN+Y+ +GRW + R M+ + + K P S +E++ K+H F+ D+ HP +++I +
Sbjct: 480 LSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDA 539
Query: 559 LEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------N 600
L + ++ G+V + V D+++E K L HSEKLA N
Sbjct: 540 LNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKN 599
Query: 601 LRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
LRVC DCHTV + ISK+ DREIVVRD+ RFH+FKDG CSCGD+W
Sbjct: 600 LRVCIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 178/365 (48%), Gaps = 21/365 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTL---FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK 66
S+ V+ VD ++T ++ F++ ++++ V SWN+++ A G EAL M +
Sbjct: 105 STGVAIVDVPGSSTAFESVRKVFDEMIERD-VVSWNTLVLGCAEEGRHHEALGFVRKMCR 163
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
P T + + D+ G + H AF GF DVFV S+LIDMY+ C
Sbjct: 164 EGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDY 223
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
+ K+FD +P +R+ + W S+L G QN + EAL +F+ L V
Sbjct: 224 SVKVFDNLP--VRDHILWNSLLAGCAQNGSVEEALGIFRRML------------QAGVRP 269
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
V +S++ C + + H +VI GF+ V + ++LID Y + G + ++ +F
Sbjct: 270 VPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIF 329
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D M D V+W ++I YA +G A EAL +F++M + + K N +T AVL A +H G++
Sbjct: 330 DKMSSPDVVSWTAMIMGYALHGPAREALVLFERM-ELGNAKPNHITFLAVLTACSHAGLV 388
Query: 307 RLG-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIA 364
G K + ++ ++ D + G++D A ++M+ K S W+ ++
Sbjct: 389 DKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLR 448
Query: 365 GYGMH 369
+H
Sbjct: 449 ACRVH 453
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/657 (37%), Positives = 389/657 (59%), Gaps = 38/657 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+++V K ++ + T+F + + +V +WN+++A A G + + M+
Sbjct: 168 TALVDVYAKCASFRHAATVFRR-MPARDVVAWNAMLAGYALHGKYSDTIACLLLMQD-DH 225
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQ---QAFIFGFHRD-VFVSSALIDMYSKCGELS 125
P ST + + L G+ H +A H+D V V +AL+DMY+KCG L
Sbjct: 226 APNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLV 285
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
A ++F+ + +RN V+W++++ G+V EA LFK+ +L + C F
Sbjct: 286 YASRVFEAMA--VRNEVTWSALVGGFVLCGRMLEAFSLFKD-MLAQGLC----------F 332
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+ ++AS L AC+ ++ + + H + K G +++ GN+L+ YA+ G +D + +
Sbjct: 333 LSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTL 392
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD M+ KD V+++++++ Y QNG A EA VF +M ++ +V+ + T+ +++ A +HL
Sbjct: 393 FDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKM-QACNVQPDVATMVSLIPACSHLAA 451
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L+ GKC H VI + + ++IDMY KCG++DL+R+ F+ M +++ SW MIAG
Sbjct: 452 LQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAG 511
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
YG+H +EA LF M P+ +TF+ ++SACSH+GLV EG W + M H++ I P
Sbjct: 512 YGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITP 571
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
+EHY MVDLL R G L EAY I+GM +KAD VWG+LLGACR+HKN+DLG+ + +
Sbjct: 572 RMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMI 631
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
+L P G VLLSNI++ AGR+++ R + K + K+PG S +E+ G +HAF+ G
Sbjct: 632 QQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGG 691
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
D+ H Q +IY+ L+ + V + ++GY D + V+ DV++EEKE L HSEKLA
Sbjct: 692 DRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVL 751
Query: 600 ------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCHTVI+ ++ V R I+VRD+ RFH+FK+G CSCGD+W
Sbjct: 752 TLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 231/474 (48%), Gaps = 33/474 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + + +N++I + G ++ S R+ P TFP +K+CSAL
Sbjct: 85 LFDQ-IPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSALL 143
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL S + H A G H D+FVS+AL+D+Y+KC A +F +P R++V+W +M
Sbjct: 144 DLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPA--RDVVAWNAM 201
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
L GY + + + L+++ AS VA+ +L+ ++
Sbjct: 202 LAGYALHGKYSDTIACL--LLMQDDHAPNAST--------LVALLPLLAQHGALSQG--- 248
Query: 208 EGAHGFVIK----RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
H + ++ V VG L+D YA+ GH+ + +VF+ M ++ VTW++++
Sbjct: 249 RAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGG 308
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
+ G EA +F M+ + ++++ L A A+L L LGK +H + K L
Sbjct: 309 FVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHT 368
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ G S++ MY K G +D A F+QM K+ S++A+++GY + +A EA +F KM
Sbjct: 369 DLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQ 428
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV--EHYGC--MVDLLGR 439
V+P+ T VS++ ACSH +Q G GH I G+ E C ++D+ +
Sbjct: 429 ACNVQPDVATMVSLIPACSHLAALQHG-----KCGHGSVIVRGIASETSICNALIDMYAK 483
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
G++ + + + M + D V W +++ IH LG+ A +++ C
Sbjct: 484 CGRIDLSRQIFDVMPAR-DIVSWNTMIAGYGIH---GLGKEATALFLDMKHQAC 533
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 161/364 (44%), Gaps = 49/364 (13%)
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG+LS AR LFD+IP I + +++ Y A L +
Sbjct: 76 CGDLSLARHLFDQIPA--PGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQ------- 126
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
++ VL ACS + H + G +++ V L+D YA+
Sbjct: 127 -----PNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFR 181
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+ VF M +D V WN+++A YA +G ++ + ++ D NA TL A+L +
Sbjct: 182 HAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACL--LLMQDDHAPNASTLVALLPLL 239
Query: 301 AHLGVLRLGKCIHDQVIKM----DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
A G L G+ +H ++ D ++ V+VGT+++DMY KCG + A + F M +N
Sbjct: 240 AQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNE 299
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAG---VRPNYITFVSVLSACS----------- 402
+W+A++ G+ + R EA LF M+ G + P + S L AC+
Sbjct: 300 VTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQL 357
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW 462
HA L + G H T G+ ++ + +AG + +A L + M VK D V +
Sbjct: 358 HALLAKSGLHTDLTAGNS------------LLSMYAKAGLIDQATTLFDQMVVK-DTVSY 404
Query: 463 GSLL 466
+L+
Sbjct: 405 SALV 408
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 53/135 (39%), Gaps = 2/135 (1%)
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
CG + LAR F+Q+ + + A+I Y + A + +PN TF V
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 398 LSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
L ACS A L ++ + + +VD+ + + A + M +
Sbjct: 136 LKACS-ALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPAR- 193
Query: 458 DFVVWGSLLGACRIH 472
D V W ++L +H
Sbjct: 194 DVVAWNAMLAGYALH 208
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/674 (36%), Positives = 388/674 (57%), Gaps = 74/674 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS-TFPCAIKSCSAL 86
LF++ +D N+F WN++I +R + EA+ + SM + P + TFP + SC+ L
Sbjct: 66 LFSQ-IDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARL 124
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G + H GF D+FV +ALI +YS G L+ AR LFDE +R++VS+ +
Sbjct: 125 SSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDE--SLVRDLVSYNT 182
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ GY + + AL LF E +NS + D ++ S CS + V
Sbjct: 183 MIKGYAEVNQPESALCLFGEM-----------QNS-GILPDEFTFVALFSVCSVLNEPNV 230
Query: 207 TEGAHGFVIK--RGFDSEVGVGNTLID--------------------------------A 232
+ H V K R DS + + + ++D
Sbjct: 231 GKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCG 290
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
YAR G ++V+RK+F+ M E+D ++W ++I+ Y+Q G +EAL++F +M ++ +K + VT
Sbjct: 291 YARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEM-EALGIKPDEVT 349
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
L AVL A A LG LGK ++ Q I+ ++ I+ +++DMY KCG +D A + F ++
Sbjct: 350 LVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRV 409
Query: 352 KEKNVRS---WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
KN+++ + +MIAG H A+ +F ++I G++P+ +TFV VL AC H+GL++
Sbjct: 410 G-KNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIE 468
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
EG +M + + I+P +EHYGCMVDLLGR G L+EAYDL++ M +A+ V+W +LL A
Sbjct: 469 EGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSA 528
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
CR H NV +GEIA +KL E+E + +VLLSNI A+A +WE+ + R +M++ + K P
Sbjct: 529 CRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPP 588
Query: 529 GFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKE 588
G+S +EL G +H F+ DK HPQ ++I L+++ ++L+ GYV + V+ D+D+EEKE
Sbjct: 589 GWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKE 648
Query: 589 MTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRF 630
+ HSEKLA NLR+C DCH +L+S++ REI VRD+ RF
Sbjct: 649 SVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRF 708
Query: 631 HYFKDGLCSCGDYW 644
H+F++G CSC D+W
Sbjct: 709 HHFRNGSCSCMDFW 722
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 225/455 (49%), Gaps = 70/455 (15%)
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE---LSDARKLFDEI 134
C ++SC + G Q H Q + G H +F S LI +S G L +R LF +I
Sbjct: 14 CLLESCKSFKQ---GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQI 70
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
N+ W +M+ GY ++DN REA++L+ + + G A N + +
Sbjct: 71 D--CPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAK----GIAPPN-------NFTFPFL 117
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
L++C+R++ H +IK GF+S++ V N LI Y+ G+++++R +FD + +D
Sbjct: 118 LNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDL 177
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
V++N++I YA+ AL +F +M +++ + + T A+ + L +GK IH
Sbjct: 178 VSYNTMIKGYAEVNQPESALCLFGEM-QNSGILPDEFTFVALFSVCSVLNEPNVGKQIHA 236
Query: 315 QVIK--MDLEESVIVGTSIIDMYCK--------------------------------CGQ 340
QV K ++ ++++ ++I+DMY K CG+
Sbjct: 237 QVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGE 296
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+++ARK FN M E++V SWTAMI+GY + EAL+LF +M G++P+ +T V+VLSA
Sbjct: 297 INVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSA 356
Query: 401 CSHAGLVQEGWHWLNTMGHEFNIEPGVEHY-----GCMVDLLGRAGKLKEAYDLIE--GM 453
C+ G G + H++ IE GV + ++D+ + G + A ++ G
Sbjct: 357 CARLGAFDLG----KRLYHQY-IENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGK 411
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
+K F V+ S++ H LGE A EL
Sbjct: 412 NMKTGF-VFNSMIAGLAQH---GLGETAITVFREL 442
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 165/377 (43%), Gaps = 59/377 (15%)
Query: 1 MKLSKSSSV-SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
M SKS++ SS+V + LFN ++ + +V SW ++I+ ++ G EAL
Sbjct: 275 MGTSKSAAAWSSMVCGYARCGEINVARKLFN-HMHERDVISWTAMISGYSQAGQCSEALE 333
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFG-FHRDVFVSSALIDMY 118
F M L + P T + +C+ L GK+ + Q G F+++ +++A++DMY
Sbjct: 334 LFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMY 393
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
+KCG + A ++F + + ++ + SM+ G Q+ A+ +F+E +
Sbjct: 394 AKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELI---------- 443
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
S + D V VL AC + + EG K+ F+S + +AY
Sbjct: 444 --STGLKPDEVTFVGVLCACGHSGL--IEEG------KKLFES-------MFNAYG---- 482
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
I+ + ++ + + G EA D+ +M + N+V A+L
Sbjct: 483 -----------IKPQMEHYGCMVDLLGRYGCLEEAYDLVQKM----PFEANSVIWRALLS 527
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEES---VIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
A G +++G+ ++++M+ + V++ + D Q + AR+ M++
Sbjct: 528 ACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILAD----ANQWEEARQVRKVMEDHG 583
Query: 356 VR---SWTAMIAGYGMH 369
+R W+ + G +H
Sbjct: 584 IRKPPGWSYIELGGAIH 600
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/646 (37%), Positives = 356/646 (55%), Gaps = 74/646 (11%)
Query: 17 DKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTF 76
+ H +N + + NVF WN VI +A+ + M + P + T+
Sbjct: 77 NPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTY 135
Query: 77 PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
P K+CS + G+Q H G DV + SA I MY+ G L DARK+F
Sbjct: 136 PTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGES 195
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
++V W +M+ GY++
Sbjct: 196 ---DVVCWNTMIDGYLK------------------------------------------- 209
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
C GV E A G + + +G N +I+ A+GG++ +RK+FD M E+D ++
Sbjct: 210 -C------GVLEAAKGLFAQMPVKN-IGSWNVMINGLAKGGNLGDARKLFDEMSERDEIS 261
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
W+S++ Y G EAL++F QM + + + LS+VL A +++G + G+ +H +
Sbjct: 262 WSSMVDGYISAGRYKEALEIFQQMQRE-ETRPGRFILSSVLAACSNIGAIDQGRWVHAYL 320
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
+ ++ ++GT+++DMY KCG++D+ + F +MKE+ + +W AMI G +H RA +AL
Sbjct: 321 KRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDAL 380
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDL 436
+LF K+ + ++PN IT V VL+AC+HAG V +G TM + ++P +EHYGCMVDL
Sbjct: 381 ELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDL 440
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYH 496
LGR+G EA DLI M +K + VWG+LLGACRIH N DL E K L ELEP N G +
Sbjct: 441 LGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRY 500
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
VLLSNIYA GR++DV + R LMK+R + PG S+V+L G VH F +GD HPQ ++IY
Sbjct: 501 VLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIY 560
Query: 557 EYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------------- 599
L+ + +LQ G+ D + V+ D+D+EEKE + HSEKLA
Sbjct: 561 RKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIV 620
Query: 600 -NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH+ +LIS++ DREI+VRD R+H+FK+G CSC D+W
Sbjct: 621 KNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 155/361 (42%), Gaps = 33/361 (9%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M + S + +++ + K + LF++ +++ + SW+S++ G EAL
Sbjct: 223 MPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEI-SWSSMVDGYISAGRYKEALEI 281
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F M++ P R + +CS + + G+ H D + +AL+DMY+K
Sbjct: 282 FQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAK 341
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG L ++F+E+ + R I +W +M+ G + A +AL LF + L+E
Sbjct: 342 CGRLDMGWEVFEEMKE--REIFTWNAMIGGLAIHGRAEDALELFSK--LQEGR------- 390
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR---GFDSEVGVGNTLIDAYARGG 237
+ + + + VL+AC+ V +G F R G D E+ ++D R G
Sbjct: 391 ---MKPNGITLVGVLTACAHAGF--VDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSG 445
Query: 238 HVDVSRKVFDGM-IEKDAVTWNSIIA---IYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ + + M ++ +A W +++ I+ LA + ++ + V L
Sbjct: 446 LFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGR--YVLL 503
Query: 294 SAVLLAIAHL-GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
S + + V ++ K + D+ IK + G SI+D+ + + + QMK
Sbjct: 504 SNIYAKVGRFDDVSKIRKLMKDRGIK------TVPGVSIVDLNGTVHEFKMGDGSHPQMK 557
Query: 353 E 353
E
Sbjct: 558 E 558
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 262/662 (39%), Positives = 378/662 (57%), Gaps = 73/662 (11%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
TLF+ + DK+ V SWN++I+ L++ EAL M + + P T + +CS L
Sbjct: 242 TLFDVFDDKDLV-SWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHL 300
Query: 87 HDLHSGKQAHQQAFIF---GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
L GK+ H AF+ + FV AL+DMY C + R +FD + +R I
Sbjct: 301 EMLGCGKEIH--AFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRR--TIAV 356
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W +M+ GYV+N+ EA+ LF E + E G S NS V ++SVL AC R
Sbjct: 357 WNAMIAGYVRNEFDYEAIELFVEMVFEL----GLSPNS-------VTLSSVLPACVRCES 405
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
EG H V+K GF+ + V N L+D Y+R G ++++R +F M KD V+WN++I
Sbjct: 406 FLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITG 465
Query: 264 YA---------------QNGLAAEALDVFDQMV--KSTDVKCNAVTLSAVLLAIAHLGVL 306
Y Q G A ++ FD K+ +K N+VTL VL A L L
Sbjct: 466 YVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAAL 525
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
GK IH +K L + V VG++++DMY KCG ++L+R F QM +NV +W +I Y
Sbjct: 526 GKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAY 585
Query: 367 GMHCRAREALDLFYKMIKAG-----VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
GMH + EAL LF +M++ G +RPN +T++++ ++ SH+G+V EG + TM +
Sbjct: 586 GMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKH 645
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV-VWGSLLGACRIHKNVDLGEI 480
IEP +HY C+VDLLGR+G+++EAY+LI+ M V W SLLGAC+IH+N+++GEI
Sbjct: 646 GIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEI 705
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
AAK LF L+PN Y S + GR MK + + K PG S +E +VH
Sbjct: 706 AAKNLFVLDPNVLDYGTKQSML----GR---------KMKEKGVRKEPGCSWIEHGDEVH 752
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA- 599
FL GD HPQ ++++EYLE L++++++ GYV D + V+H+V +EEKE L HSE+LA
Sbjct: 753 KFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAI 812
Query: 600 -----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
NLRVC DCH + ISK+VDREI++RD +RFH+F++G CSCGD
Sbjct: 813 AFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGD 872
Query: 643 YW 644
YW
Sbjct: 873 YW 874
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/417 (34%), Positives = 223/417 (53%), Gaps = 27/417 (6%)
Query: 56 EALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALI 115
+A+ +++M + P FP +K+ + + DL+ GKQ H F FG V ++L+
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127
Query: 116 DMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG 175
+MY KCG++ AR++FDEI R+ VSW SM+ + + A+ LF+ LLE
Sbjct: 128 NMYGKCGDIDAARRVFDEITN--RDDVSWNSMINAACRFEEWELAVHLFRLMLLE----- 180
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAY 233
NV S + SV ACS + +NG+ G H FV++ G D N L+ Y
Sbjct: 181 -------NVGPTSFTLVSVAHACSNL-INGLLLGKQVHAFVLRNG-DWRTFTNNALVTMY 231
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
A+ G V ++ +FD +KD V+WN+II+ +QN EAL M++S V+ N VTL
Sbjct: 232 AKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQS-GVRPNGVTL 290
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
++VL A +HL +L GK IH V+ DL E+ VG +++DMYC C Q + R F+ M
Sbjct: 291 ASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMF 350
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMI-KAGVRPNYITFVSVLSAC--SHAGLVQE 409
+ + W AMIAGY + EA++LF +M+ + G+ PN +T SVL AC + L +E
Sbjct: 351 RRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKE 410
Query: 410 GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
G H + ++ E ++D+ R G+++ A + M K D V W +++
Sbjct: 411 GIH---SCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRK-DIVSWNTMI 463
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 144/506 (28%), Positives = 236/506 (46%), Gaps = 53/506 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL- 86
+F++ ++++V SWNS+I R + A+ F M ++ PT T +CS L
Sbjct: 142 VFDEITNRDDV-SWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLI 200
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ L GKQ H G R F ++AL+ MY+K G + +A+ LFD +++VSW +
Sbjct: 201 NGLLLGKQVHAFVLRNGDWR-TFTNNALVTMYAKLGRVYEAKTLFDVFDD--KDLVSWNT 257
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+++ QND EALL L V + V +ASVL ACS + + G
Sbjct: 258 IISSLSQNDRFEEALLYLHVML------------QSGVRPNGVTLASVLPACSHLEMLGC 305
Query: 207 TEGAHGFVI-KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H FV+ VG L+D Y + R VFDGM + WN++IA Y
Sbjct: 306 GKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYV 365
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+N EA+++F +MV + N+VTLS+VL A + IH V+K E+
Sbjct: 366 RNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDK 425
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V +++DMY + G++++AR F M K++ SW MI GY + R +AL+L + M +
Sbjct: 426 YVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRG 485
Query: 386 ------------------GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
++PN +T ++VL C+ + +G ++ + + V
Sbjct: 486 QAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKE-IHAYAVKQMLSKDV 544
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF- 486
+VD+ + G L + + E M V+ + + W L+ A +H GE A KLF
Sbjct: 545 AVGSALVDMYAKCGCLNLSRTVFEQMSVR-NVITWNVLIMAYGMHGK---GE-EALKLFR 599
Query: 487 ----------ELEPNNCGYHVLLSNI 502
E+ PN Y + +++
Sbjct: 600 RMVEEGDNNREIRPNEVTYIAIFASL 625
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 18/158 (11%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
LSK +V S + ++ NL+ + + NV +WN +I G EAL+ F
Sbjct: 540 LSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFR 599
Query: 63 SM-----RKLSLTPTRSTFPCAIKSCS-------ALHDLHSGKQAHQQAFIFGFHRDVFV 110
M + P T+ S S L+ ++ K H G
Sbjct: 600 RMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKH------GIEPTSDH 653
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
+ L+D+ + G++ +A L +P ++ + +W+S+L
Sbjct: 654 YACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLL 691
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/633 (37%), Positives = 370/633 (58%), Gaps = 34/633 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + +V +N++IA LA+ G +VEA + MR + R+T+ + +CS L
Sbjct: 288 KGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALE 347
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+GK H G DV + +ALI MY++CG+L AR+LF +P+R +++SW +++ G
Sbjct: 348 AGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKR--DLISWNAIIAG 405
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y + ++ EA+ L+K+ S+ V V +LSAC+ + +
Sbjct: 406 YARREDRGEAMRLYKQM------------QSEGVKPGRVTFLHLLSACANSSAYADGKMI 453
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +++ G S + N L++ Y R G + ++ VF+G +D ++WNS+IA +AQ+G
Sbjct: 454 HEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY 513
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
A +F +M ++ +++ + +T ++VL + L LGK IH ++ + L+ V +G +
Sbjct: 514 ETAYKLFQEM-QNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNA 572
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP- 389
+I+MY +CG + AR F+ ++ ++V SWTAMI G +A++LF++M G RP
Sbjct: 573 LINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPP 632
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ TF S+LSAC+HAGLV EG+ ++M E+ + P +EHYGC+V LLGRA + +EA L
Sbjct: 633 DGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETL 692
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I M D VW +LLGACRIH N+ L E AA +L N ++LLSN+YA AGRW
Sbjct: 693 INQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRW 752
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
+DV + R +M+ R + K PG S +E+ +H F+ D+ HP+ +IY L+ L+V+++E
Sbjct: 753 DDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEA 812
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GY D V+HD+ + +E +L HSE+LA NLR+CGDCHT
Sbjct: 813 GYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTAS 872
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ ISK+V REI+ RDS RFH FK+G CSC DYW
Sbjct: 873 KFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 144/480 (30%), Positives = 249/480 (51%), Gaps = 35/480 (7%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + + +V SWNS+I+ A+ G +A + F M+ P + T+ + +C + +L
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+GK+ H Q G+ RD V ++L+ MY KCG+L AR++F I R++VS+ +ML
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISP--RDVVSYNTMLGL 203
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y Q +E L LF + +S+ + D V ++L A + ++ +
Sbjct: 204 YAQKAYVKECLGLFGQM------------SSEGISPDKVTYINLLDAFTTPSMLDEGKRI 251
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H ++ G +S++ VG L+ R G VD +++ F G+ ++D V +N++IA AQ+G
Sbjct: 252 HKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHN 311
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA + + +M +S V N T ++L A + L GK IH + + V +G +
Sbjct: 312 VEAFEQYYRM-RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNA 370
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+I MY +CG + AR+ F M ++++ SW A+IAGY EA+ L+ +M GV+P
Sbjct: 371 LISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPG 430
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG----CMVDLLGRAGKLKEA 446
+TF+ +LSAC+++ +G M HE + G++ G ++++ R G L EA
Sbjct: 431 RVTFLHLLSACANSSAYADG-----KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEA 485
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF------ELEPNNCGYHVLLS 500
++ EG + + D + W S++ H + + A KLF ELEP+N + +LS
Sbjct: 486 QNVFEGTQAR-DVISWNSMIAGHAQHGSYE----TAYKLFQEMQNEELEPDNITFASVLS 540
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/554 (25%), Positives = 260/554 (46%), Gaps = 57/554 (10%)
Query: 73 RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFD 132
R+T+ +++C+ L K+ H Q G D+F+S+ LI+MY KC + DA ++F
Sbjct: 27 RATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFK 86
Query: 133 EIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIA 192
E+P+R +++SW S+++ Y Q ++A LF+E + + +
Sbjct: 87 EMPRR--DVISWNSLISCYAQQGFKKKAFQLFEEM------------QNAGFIPNKITYI 132
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK 252
S+L+AC + H +IK G+ + V N+L+ Y + G + +R+VF G+ +
Sbjct: 133 SILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPR 192
Query: 253 DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI 312
D V++N+++ +YAQ E L +F QM S + + VT +L A +L GK I
Sbjct: 193 DVVSYNTMLGLYAQKAYVKECLGLFGQM-SSEGISPDKVTYINLLDAFTTPSMLDEGKRI 251
Query: 313 HDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
H ++ L + VGT+++ M +CG VD A++AF + +++V + A+IA H
Sbjct: 252 HKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHN 311
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG---WHWLNTMGHEFNIEPGVEH 429
EA + +Y+M GV N T++S+L+ACS + ++ G ++ GH +++ G
Sbjct: 312 VEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG--- 368
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG----------ACRIHKN----- 474
++ + R G L +A +L M K D + W +++ A R++K
Sbjct: 369 -NALISMYARCGDLPKARELFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEG 426
Query: 475 VDLGEIAAKKLFELEPNNCGY--------HVLLSNIYANA----GRWEDVERTRSLMKNR 522
V G + L N+ Y +L S I +N R SLM+ +
Sbjct: 427 VKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQ 486
Query: 523 RLAKTPGFSLVELRGKV--HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIH 580
+ F + R + ++ + G +H +E Y+ +E+ + E +T + +
Sbjct: 487 NV-----FEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSG 541
Query: 581 DVDQEEKEMTLRIH 594
+ E E+ +IH
Sbjct: 542 CKNPEALELGKQIH 555
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 148/312 (47%), Gaps = 17/312 (5%)
Query: 171 ESECGGASENSDNVF------VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
E CG E+ N D ++L C+R + + H +++ G ++
Sbjct: 4 ERHCGPDREDVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIF 63
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+ N LI+ Y + V + +VF M +D ++WNS+I+ YAQ G +A +F++M +
Sbjct: 64 LSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAG 123
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+ N +T ++L A L GK IH Q+IK + V S++ MY KCG + A
Sbjct: 124 FIP-NKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRA 182
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R+ F + ++V S+ M+ Y +E L LF +M G+ P+ +T++++L A +
Sbjct: 183 RQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTP 242
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
++ EG H+ +E G+ +V + R G + A +G+ + D V
Sbjct: 243 SMLDEGKRI-----HKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADR-DVV 296
Query: 461 VWGSLLGACRIH 472
V+ +L+ A H
Sbjct: 297 VYNALIAALAQH 308
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/666 (36%), Positives = 375/666 (56%), Gaps = 65/666 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + + N+F WN++I +R + + M + + P R TFP K +
Sbjct: 95 LFDE-IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDI 153
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+Q H G +VFV +AL+ MY CG+L AR +FD P+ ++++W +
Sbjct: 154 ALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA--DVITWNMI 211
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ Y + E+ LF ++E+ + V +V + VLSACS++
Sbjct: 212 ISAYNKVGKFEESRRLF--LVMEDKQ----------VLPTTVTLVLVLSACSKLKDLRTG 259
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYA-------------------------------RG 236
+ H +V +S + + N +ID YA
Sbjct: 260 KKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNL 319
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G +DV+R FD M EKD V+W ++I Y ++ EAL++F M ++T+VK + T+ +V
Sbjct: 320 GEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNM-QATNVKPDEFTMVSV 378
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A AHLG L LG+ I + + ++ + V ++IDMY KCG VD A F +M +++
Sbjct: 379 LTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDK 438
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+WTAMI G ++ +ALD+F M+KA + P+ IT++ VLSAC+H GLV +G +
Sbjct: 439 FTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLR 498
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M + IEP + HYGC+VDLL RAG+LKEAY++IE M +KA+ +VWG+LL CR+++ D
Sbjct: 499 MTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESD 558
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
+ E+ K++ ELEP+N +VLL NIYA RW D+ R +M ++ + K PG SL+E+
Sbjct: 559 MAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMN 618
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
G+VH F+ GD+ HPQ + I L+++ L+ GY D++ V D+ +E+KE ++ HSE
Sbjct: 619 GRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSE 678
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLR+C DCH + +L+SKV +RE++VRD RFH+FK GLC
Sbjct: 679 KLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLC 738
Query: 639 SCGDYW 644
SC DYW
Sbjct: 739 SCKDYW 744
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 194/432 (44%), Gaps = 53/432 (12%)
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELS 125
S +P +++C ++ L +Q H QA G + + + + ++ + G+
Sbjct: 34 SFSPPTHPLISLLETCESMDQL---QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQ 90
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
AR+LFDEIP+ N+ W +M+ GY + D + + L+ E L V
Sbjct: 91 YARRLFDEIPE--PNLFIWNTMIRGYSRLDFPQLGVSLYLEML------------RRGVK 136
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
D + +R HG V+K G V V L+ Y G +D +R V
Sbjct: 137 PDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGV 196
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD + D +TWN II+ Y + G E+ +F M + V VTL VL A + L
Sbjct: 197 FDVCPKADVITWNMIISAYNKVGKFEESRRLFLVM-EDKQVLPTTVTLVLVLSACSKLKD 255
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC--------------------------- 338
LR GK +H V +E ++++ ++IDMY C
Sbjct: 256 LRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSG 315
Query: 339 ----GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
G++D+AR F++M EK+ SWTAMI GY R +EAL+LF M V+P+ T
Sbjct: 316 FTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTM 375
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
VSVL+AC+H G ++ G W+ T I+ + ++D+ + G + +A + M
Sbjct: 376 VSVLTACAHLGALELG-EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS 434
Query: 455 VKADFVVWGSLL 466
+ F W +++
Sbjct: 435 QRDKF-TWTAMI 445
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 138/304 (45%), Gaps = 14/304 (4%)
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLID--AYARGGHVDVSRKVFD 247
+ S+L C + + H IK+G ++ + N ++ G +R++FD
Sbjct: 41 PLISLLETCESM---DQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFD 97
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ E + WN++I Y++ + ++ +M++ VK + T + L
Sbjct: 98 EIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRR-GVKPDRYTFPFLFKGFTRDIALE 156
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
G+ +H V+K L+ +V V T+++ MY CGQ+D AR F+ + +V +W +I+ Y
Sbjct: 157 YGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYN 216
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+ E+ LF M V P +T V VLSACS ++ G +++ +E +
Sbjct: 217 KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTG-KKVHSYVKNCKVESNL 275
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI-AAKKLF 486
M+D+ G++ A + M + D + W +++ +LGEI A+ F
Sbjct: 276 VLENAMIDMYADCGEMDSALGIFRSMNNR-DIISWTTIVSGF-----TNLGEIDVARNYF 329
Query: 487 ELEP 490
+ P
Sbjct: 330 DKMP 333
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/627 (39%), Positives = 364/627 (58%), Gaps = 35/627 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V ++N ++ A+ GD +A F M+++ L P + +F + C L GK H
Sbjct: 223 DVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVH 282
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Q G D+ V+++LI MY+ CG + AR++FD + ++R++VSWT M+ GY +N N
Sbjct: 283 AQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNM--KVRDVVSWTVMIEGYAENGN 340
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS-RVTVNGVTEGAHGFVI 215
+A LF A+ + + D + +++AC+ +N E H V
Sbjct: 341 IEDAFGLF------------ATMQEEGIQPDRITYMHIMNACAISANLNHARE-IHSQVD 387
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
GF +++ V L+ YA+ G + +R+VFD M +D V+W+++I Y +NG EA +
Sbjct: 388 IAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFE 447
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
F ++K ++++ + VT +L A HLG L +G I+ Q IK DL V +G ++I M
Sbjct: 448 TF-HLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMN 506
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
K G V+ AR F+ M ++V +W AMI GY +H AREAL LF +M+K RPN +TFV
Sbjct: 507 AKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFV 566
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
VLSACS AG V EG + + I P V+ YGCMVDLLGRAG+L EA LI+ M V
Sbjct: 567 GVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPV 626
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
K +W SLL ACRIH N+D+ E AA++ ++P + +V LS++YA AG WE+V +
Sbjct: 627 KPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKV 686
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
R +M++R + K G + +E+ GKVH F+V D+ HP +IY L L ++ GY+
Sbjct: 687 RKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPIT 746
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
+V+HDV +++KE + HSEKLA NLRVC DCH+ + ISKV
Sbjct: 747 QNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKV 806
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
REI+ RD+ RFH+FKDG+CSCGDYW
Sbjct: 807 TGREIIARDASRFHHFKDGVCSCGDYW 833
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 222/442 (50%), Gaps = 17/442 (3%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V+ V +WN++IA A+ G EA F M L P+ TF + +CS+ L+ G
Sbjct: 118 VENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWG 177
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H Q GF D + +AL+ MY K G + DAR++FD + IR++ ++ M+ GY
Sbjct: 178 KEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGL--HIRDVSTFNVMVGGYA 235
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
++ + +A LF + +++ G N ++ S+L C + H
Sbjct: 236 KSGDWEKAFELF--YRMQQV---GLKPN-------KISFLSILDGCWTPEALAWGKAVHA 283
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ G ++ V +LI Y G ++ +R+VFD M +D V+W +I YA+NG +
Sbjct: 284 QCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIED 343
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A +F M + ++ + +T ++ A A L + IH QV ++V T+++
Sbjct: 344 AFGLFATM-QEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALV 402
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
MY KCG + AR+ F+ M ++V SW+AMI Y + EA + F+ M ++ + P+ +
Sbjct: 403 HMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGV 462
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
T++++L+AC H G + G + T + ++ V ++ + + G ++ A + +
Sbjct: 463 TYINLLNACGHLGALDVGME-IYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDT 521
Query: 453 MKVKADFVVWGSLLGACRIHKN 474
M V+ D + W +++G +H N
Sbjct: 522 M-VRRDVITWNAMIGGYSLHGN 542
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 213/436 (48%), Gaps = 51/436 (11%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N V+ L GG+ +++ T+ + C+ L D GKQ
Sbjct: 42 NDVLQRLGEGGNHIDS----------------RTYVKLFQRCTELRDAALGKQVRDHIIQ 85
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
G +++ + LI +YS CG +++AR++FD + + +V+W +++ GY Q + +EA
Sbjct: 86 GGRQLNIYELNTLIKLYSICGNVTEARQIFDSVEN--KTVVTWNALIAGYAQVGHVKEAF 143
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
LF++ + E E + SVL ACS + H V+ GF S
Sbjct: 144 ALFRQMVDEGLE------------PSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVS 191
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+ +G L+ Y +GG +D +R+VFDG+ +D T+N ++ YA++G +A ++F +M
Sbjct: 192 DFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRM- 250
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ +K N ++ ++L L GK +H Q + L + + V TS+I MY CG +
Sbjct: 251 QQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSI 310
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ AR+ F+ MK ++V SWT MI GY + +A LF M + G++P+ IT++ +++AC
Sbjct: 311 EGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNAC 370
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL---------GRAGKLKEAYDLIEG 452
+ + + H I V+ G DLL + G +K+A + +
Sbjct: 371 AISA----------NLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDA 420
Query: 453 MKVKADFVVWGSLLGA 468
M + D V W +++GA
Sbjct: 421 MP-RRDVVSWSAMIGA 435
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 157/320 (49%), Gaps = 14/320 (4%)
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+DS + C+ + + + +I+ G + NTLI Y+ G+V +R++
Sbjct: 55 IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD + K VTWN++IA YAQ G EA +F QMV ++ + +T +VL A +
Sbjct: 115 FDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDE-GLEPSIITFLSVLDACSSPAG 173
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L GK +H QV+ +GT+++ MY K G +D AR+ F+ + ++V ++ M+ G
Sbjct: 174 LNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGG 233
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y +A +LFY+M + G++PN I+F+S+L C E W + H +
Sbjct: 234 YAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGC----WTPEALAWGKAV-HAQCMNA 288
Query: 426 G----VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD--LGE 479
G + ++ + G ++ A + + MKV+ D V W ++ + N++ G
Sbjct: 289 GLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVR-DVVSWTVMIEGYAENGNIEDAFGL 347
Query: 480 IAAKKLFELEPNNCGY-HVL 498
A + ++P+ Y H++
Sbjct: 348 FATMQEEGIQPDRITYMHIM 367
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP 77
KH + +F+ V + +V +WN++I + G++ EAL F M K P TF
Sbjct: 508 KHGSVERARYIFDTMV-RRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFV 566
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIF-----GFHRDVFVSSALIDMYSKCGELSDARKLFD 132
+ +CS + G+ + F + G V + ++D+ + GEL +A L
Sbjct: 567 GVLSACSRAGFVDEGR----RFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIK 622
Query: 133 EIPQRIRNIVSWTSML 148
+P + + + W+S+L
Sbjct: 623 SMPVKPTSSI-WSSLL 637
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/614 (37%), Positives = 373/614 (60%), Gaps = 35/614 (5%)
Query: 49 ARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDV 108
+R G ALR F ++ + P +TF A+ +C+ L DL G+ +AF G+ DV
Sbjct: 85 SRRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL 168
FV S+L+ +Y++ G + DA K+F +P+R R V+W++M+ G+V +A+ +++
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFVRMPRRDR--VTWSTMVAGFVSAGQPLDAIQMYRRM- 200
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
D V D V + V+ AC+ + HG +++ G +V +
Sbjct: 201 -----------REDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATS 249
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
L+D YA+ G +DV+ +VF M+ ++ V+W+++I+ +AQNG + EAL +F M +++ ++
Sbjct: 250 LVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNM-QASGIQP 308
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
++ L + LLA +++G L+LG+ +H +++ + + I+GT+ IDMY KCG + A+ F
Sbjct: 309 DSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLF 367
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
N + ++++ W AMIA G H R ++AL LF +M + G+RP++ TF S+LSA SH+GLV+
Sbjct: 368 NMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVE 427
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
EG W M + F I P +HY C+VDLL R+G ++EA DL+ MK + +W +LL
Sbjct: 428 EGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSG 487
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
C +K ++LGE A + EL+P++ G L+SN+YA +W+ V + R LMK+ K P
Sbjct: 488 CLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMP 547
Query: 529 GFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKE 588
G S +E+RG H F++ D+ HPQ E+I + +L+++++++GY+ V HD+++E KE
Sbjct: 548 GCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKE 607
Query: 589 MTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRF 630
L HSE+LA NLRVCGDCH I+ ISK+ DREIVVRD+KRF
Sbjct: 608 QQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRF 667
Query: 631 HYFKDGLCSCGDYW 644
H+FKDG+CSC DYW
Sbjct: 668 HHFKDGVCSCRDYW 681
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/614 (37%), Positives = 373/614 (60%), Gaps = 35/614 (5%)
Query: 49 ARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDV 108
+R G ALR F ++ + P +TF A+ +C+ L DL G+ +AF G+ DV
Sbjct: 85 SRRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL 168
FV S+L+ +Y++ G + DA K+F +P+R R V+W++M+ G+V +A+ +++
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFVRMPRRDR--VTWSTMVAGFVSAGQPLDAIQMYRRM- 200
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
D V D V + V+ AC+ + HG +++ G +V +
Sbjct: 201 -----------REDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATS 249
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
L+D YA+ G +DV+ +VF M+ ++ V+W+++I+ +AQNG + EAL +F M +++ ++
Sbjct: 250 LVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNM-QASGIQP 308
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
++ L + LLA +++G L+LG+ +H +++ + + I+GT+ IDMY KCG + A+ F
Sbjct: 309 DSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLF 367
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
N + ++++ W AMIA G H R ++AL LF +M + G+RP++ TF S+LSA SH+GLV+
Sbjct: 368 NMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVE 427
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
EG W M + F I P +HY C+VDLL R+G ++EA DL+ MK + +W +LL
Sbjct: 428 EGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSG 487
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
C +K ++LGE A + EL+P++ G L+SN+YA +W+ V + R LMK+ K P
Sbjct: 488 CLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMP 547
Query: 529 GFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKE 588
G S +E+RG H F++ D+ HPQ E+I + +L+++++++GY+ V HD+++E KE
Sbjct: 548 GCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKE 607
Query: 589 MTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRF 630
L HSE+LA NLRVCGDCH I+ ISK+ DREIVVRD+KRF
Sbjct: 608 QQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRF 667
Query: 631 HYFKDGLCSCGDYW 644
H+FKDG+CSC DYW
Sbjct: 668 HHFKDGVCSCRDYW 681
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/659 (39%), Positives = 370/659 (56%), Gaps = 58/659 (8%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S +S++S ++ +F+ +KN++ SWN ++A G EA F S
Sbjct: 144 SWNSLLSGYAQNGYVDEAREVFDNMPEKNSI-SWNGLLAAYVHNGRIEEACLLFESKSDW 202
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
L ++ C + L + + + RD + +I Y++ G LS A
Sbjct: 203 DLI----SWNCLMGGFVRKKKLGDARWLFDKMPV----RDAISWNTMISGYAQGGGLSQA 254
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R+LFDE P R++ +WT+M++GYVQN EA F E + E++E + + V
Sbjct: 255 RRLFDESP--TRDVFTWTAMVSGYVQNGMLDEAKTFFDE-MPEKNEVSYNAMIAGYVQTK 311
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS----EVGVGNTLIDAYARGGHVDVSR 243
+ IA L F+S + NT+I Y + G + +R
Sbjct: 312 KMDIAREL-----------------------FESMPCRNISSWNTMITGYGQIGDIAQAR 348
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
K FD M ++D V+W +IIA YAQ+G EAL++F + +K N T L A +
Sbjct: 349 KFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVE-IKQDGESLNRATFGCALSTCADI 407
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L LGK IH Q +KM VG +++ MY KCG +D A F ++EK+V SW M+
Sbjct: 408 AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTML 467
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
AGY H R+AL +F M AGV+P+ IT V VLSACSH GL+ G + +M ++ +
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
P +HY CM+DLLGRAG+L+EA DLI M + WG+LLGA RIH N +LGE AA+
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAE 587
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
+F++EP N G +VLLSN+YA +GRW D ++ RS M++ + K PG+S VE++ K+H F
Sbjct: 588 MVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFS 647
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
VGD HP+ E+IY YLEEL++K++E GYV+ V+HDV++EEKE L+ HSEKLA
Sbjct: 648 VGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFG 707
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH+ I+ ISK+V R I++RDS RFH+F +G CSCGDYW
Sbjct: 708 ILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 200/471 (42%), Gaps = 72/471 (15%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V ++ WN I+ R G AL F++M P RS+ L + S
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTM------PRRSSVSYNAMISGYLRN--SK 95
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ F RD+F + ++ Y + L DAR+LFD +P++ ++VSW S+L+GY
Sbjct: 96 FNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEK--DVVSWNSLLSGYA 153
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC----SRVTVNGVTE 208
QN EA +F E S N + V + AC S+ + ++
Sbjct: 154 QNGYVDEAREVFDNM----PEKNSISWNG--LLAAYVHNGRIEEACLLFESKSDWDLISW 207
Query: 209 GA--HGFVIKRG-------FDS----EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
GFV K+ FD + NT+I YA+GG + +R++FD +D
Sbjct: 208 NCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVF 267
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
TW ++++ Y QNG+ EA FD+M + +V NA+ V Q
Sbjct: 268 TWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYV------------------Q 309
Query: 316 VIKMDLEESVIVG---------TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
KMD+ + ++I Y + G + ARK F+ M +++ SW A+IAGY
Sbjct: 310 TKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGY 369
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
EAL++F ++ + G N TF LS C+ ++ G G + G
Sbjct: 370 AQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG---KQIHGQAVKMGYG 426
Query: 427 VEHYGCMVD-----LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
GC V + + G + EA D EG++ K D V W ++L H
Sbjct: 427 T---GCFVGNALLAMYFKCGSIDEANDTFEGIEEK-DVVSWNTMLAGYARH 473
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 125/255 (49%), Gaps = 63/255 (24%)
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW 462
+ GL+ G + M E+++ P +HY CM+DLLGR +L+E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 463 GSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNR 522
G+LLGA RIH N +LGE AA+ F++ P N G S M++
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSGI---------------------SKMRDV 857
Query: 523 RLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL--------QEVGYVTD 574
+ K PG+S E++ K+H F VG + E I +LEEL++K+ + + Y+++
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVGLFLSRERENI-GFLEELDLKMREREEEKERTLKYLSE 916
Query: 575 -----MTSVIHDVDQEEKEMTLRIHSEKLANLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
+ + V + + M R++ VC DC + I+ +SK+V R I +RDS
Sbjct: 917 NLAAALGILTIPVGRPNRVMKKRVY--------VCEDCRSAIKHMSKIVGRLITLRDS-- 966
Query: 630 FHYFKDGLCSCGDYW 644
H F + +CSCG+YW
Sbjct: 967 -HRFNESICSCGEYW 980
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 134/287 (46%), Gaps = 26/287 (9%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N ++ Y R + +R++FD M EKD V+WNS+++ YAQNG EA +VFD M +
Sbjct: 115 NVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK--- 171
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
N+++ + +L A H G + + + DL I ++ + + ++ AR
Sbjct: 172 --NSISWNGLLAAYVHNGRIEEACLLFESKSDWDL----ISWNCLMGGFVRKKKLGDARW 225
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F++M ++ SW MI+GY +A LF + V T+ +++S G+
Sbjct: 226 LFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDV----FTWTAMVSGYVQNGM 281
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ E + + M + + Y M+ + K+ A +L E M + + W ++
Sbjct: 282 LDEAKTFFDEMPEKNEVS-----YNAMIAGYVQTKKMDIARELFESMPCR-NISSWNTM- 334
Query: 467 GACRIHKNVDLGEIA-AKKLFELEPN-NCGYHVLLSNIYANAGRWED 511
I +G+IA A+K F++ P +C + YA +G +E+
Sbjct: 335 ----ITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEE 377
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 257/661 (38%), Positives = 371/661 (56%), Gaps = 55/661 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
+V SWNS+I A+ G AL FS M + P T + C+++ GKQ
Sbjct: 192 DVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQF 251
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H A +++FV + L+DMY+K G + +A +F +P ++++VSW +M+ GY Q
Sbjct: 252 HGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMP--VKDVVSWNAMVAGYSQIG 309
Query: 156 NAREALLLFKEFLLEE---------SECGGASEN--------------SDNVFVDSVAIA 192
+A+ LF++ E+ + G ++ S + + V +
Sbjct: 310 RFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFD-------SEVGVGNTLIDAYARGGHVDVSRKV 245
SVLS C+ V + H + IK D E V N LID YA+ VD++R +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAM 429
Query: 246 FDGMI--EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS-TDVKCNAVTLSAVLLAIAH 302
FD + E+D VTW +I Y+Q+G A +AL++ +M + + NA T+S L+A A
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 303 LGVLRLGKCIHDQVIKMDLEE-SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
L L +GK IH ++ + V +IDMY KCG + AR F+ M EKN +WT+
Sbjct: 490 LAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTS 549
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
++ GYGMH EAL +F +M + G + + +T + VL ACSH+G++ +G + N M +F
Sbjct: 550 LMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDF 609
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
+ PG EHY C+VDLLGRAG+L A LIE M ++ VVW +LL CRIH V+LGE A
Sbjct: 610 GVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYA 669
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
AKK+ EL NN G + LLSN+YANAGRW+DV R RSLM+++ + K PG S VE
Sbjct: 670 AKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTT 729
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
F VGDK HP ++IY+ L + +++++GYV + +HDVD EEK+ L HSEKLA
Sbjct: 730 FFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALA 789
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
NLRVCGDCHT +S+++D EI++RDS RFH+FK+GLCSC Y
Sbjct: 790 YGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGY 849
Query: 644 W 644
W
Sbjct: 850 W 850
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 237/487 (48%), Gaps = 73/487 (14%)
Query: 38 VFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ 97
V+ WNS+I G + + L +F M LS TP TFP K+C + + G +H
Sbjct: 92 VYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHA 151
Query: 98 QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA 157
+ + GF +VFV +AL+ MYS+CG LSDARK+FDE+P + ++VSW S++ Y +
Sbjct: 152 LSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMP--VWDVVSWNSIIESYAKLGKP 209
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
+ AL +F + N D + + +VL C+ V + + HGF +
Sbjct: 210 KMALEMFSKM-----------TNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTS 258
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA--------------- 262
+ VGN L+D YA+ G +D + VF M KD V+WN+++A
Sbjct: 259 EMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 263 --------------------IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
YAQ GL EAL V QM+ S+ +K N VTL +VL A
Sbjct: 319 EQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML-SSGIKPNEVTLISVLSGCAS 377
Query: 303 LGVLRLGKCIHDQVIK--MDL------EESVIVGTSIIDMYCKCGQVDLARKAFNQM--K 352
+G L GK IH IK MDL +E++++ +IDMY KC +VD+AR F+ + K
Sbjct: 378 VGALMHGKEIHCYAIKYPMDLRKNGHGDENMVI-NQLIDMYAKCKKVDIARAMFDSLSPK 436
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIK--AGVRPNYITFVSVLSACSHAGLVQEG 410
E++V +WT MI GY H A +AL+L +M + RPN T L AC+ + G
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIG 496
Query: 411 WHWLNTMGHEF---NIEPGVEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
H + N + V + C++D+ + G + +A + + M K + V W SL
Sbjct: 497 -----KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNE-VTWTSL 550
Query: 466 LGACRIH 472
+ +H
Sbjct: 551 MTGYGMH 557
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 194/454 (42%), Gaps = 60/454 (13%)
Query: 77 PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
P I C + + K HQ+ FG + ++S LI Y G LS A L P
Sbjct: 32 PPFIHKCKTISQV---KLIHQKLLSFGI-LTLNLTSHLISTYISLGCLSHAVSLLRRFPP 87
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
+ W S++ Y N A + L F L S S DN V
Sbjct: 88 SDAGVYHWNSLIRSYGNNGRANKCL---SSFCLMHS----LSWTPDNY-----TFPFVFK 135
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
AC ++ + +H GF S V VGN L+ Y+R G + +RKVFD M D V+
Sbjct: 136 ACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVS 195
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
WNSII YA+ G AL++F +M + + +TL VL A +G LGK H
Sbjct: 196 WNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFA 255
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
+ ++ +++ VG ++DMY K G +D A F+ M K+V SW AM+AGY R +A+
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAV 315
Query: 377 DLF-----------------------------------YKMIKAGVRPNYITFVSVLSAC 401
LF +M+ +G++PN +T +SVLS C
Sbjct: 316 RLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYG-------CMVDLLGRAGKLKEAYDLIEGMK 454
+ G + G ++ ++ ++ +G ++D+ + K+ A + + +
Sbjct: 376 ASVGALMHGKE-IHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLS 434
Query: 455 VKA-DFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
K D V W ++G H + + ++FE
Sbjct: 435 PKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 173/348 (49%), Gaps = 27/348 (7%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K +V +W++ I+ A+ G EAL M + P T + C+++ L GK+
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 95 AHQQAFIF-------GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
H A + G + V + LIDMY+KC ++ AR +FD + + R++V+WT M
Sbjct: 387 IHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVM 446
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY Q+ +A +AL L E E +C + N F I+ L AC+ + +
Sbjct: 447 IGGYSQHGDANKALELLSEMF--EEDC----QTRPNAFT----ISCALVACASLAALSIG 496
Query: 208 EGAHGFVIKRGFDS-EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H + ++ ++ + V N LID YA+ G + +R VFD M+EK+ VTW S++ Y
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGM 556
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
+G EAL +F++M + K + VTL VL A +H G++ G + +M + V
Sbjct: 557 HGYGEEALGIFEEM-RRIGFKLDGVTLLVVLYACSHSGMIDQGM---EYFNRMKTDFGVS 612
Query: 327 VGTS----IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
G ++D+ + G+++ A + +M E W A+++ +H
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIH 660
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/659 (39%), Positives = 370/659 (56%), Gaps = 58/659 (8%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S +S++S ++ +F+ +KN++ SWN ++A G EA F S
Sbjct: 144 SWNSLLSGYAQNGYVDEAREVFDNMPEKNSI-SWNGLLAAYVHNGRIEEACLLFESKSDW 202
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
L ++ C + L + + + RD + +I Y++ G LS A
Sbjct: 203 DLI----SWNCLMGGFVRKKKLGDARWLFDKMPV----RDAISWNTMISGYAQGGGLSQA 254
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R+LFDE P R++ +WT+M++GYVQN EA F E + E++E + + V
Sbjct: 255 RRLFDESP--TRDVFTWTAMVSGYVQNGMLDEAKTFFDE-MPEKNEVSYNAMIAGYVQTK 311
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS----EVGVGNTLIDAYARGGHVDVSR 243
+ IA L F+S + NT+I Y + G + +R
Sbjct: 312 KMDIAREL-----------------------FESMPCRNISSWNTMITGYGQIGDIAQAR 348
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
K FD M ++D V+W +IIA YAQ+G EAL++F + +K N T L A +
Sbjct: 349 KFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVE-IKQDGESLNRATFGCALSTCADI 407
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L LGK IH Q +KM VG +++ MY KCG +D A F ++EK+V SW M+
Sbjct: 408 AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTML 467
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
AGY H R+AL +F M AGV+P+ IT V VLSACSH GL+ G + +M ++ +
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
P +HY CM+DLLGRAG+L+EA DLI M + WG+LLGA RIH N +LGE AA+
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAE 587
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
+F++EP N G +VLLSN+YA +GRW D ++ RS M++ + K PG+S VE++ K+H F
Sbjct: 588 MVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFS 647
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
VGD HP+ E+IY YLEEL++K++E GYV+ V+HDV++EEKE L+ HSEKLA
Sbjct: 648 VGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFG 707
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH+ I+ ISK+V R I++RDS RFH+F +G CSCGDYW
Sbjct: 708 ILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 200/471 (42%), Gaps = 72/471 (15%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V ++ WN I+ R G AL F++M P RS+ L + S
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTM------PRRSSVSYNAMISGYLRN--SK 95
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ F RD+F + ++ Y + L DAR+LFD +P++ ++VSW S+L+GY
Sbjct: 96 FNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEK--DVVSWNSLLSGYA 153
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC----SRVTVNGVTE 208
QN EA +F E S N + V + AC S+ + ++
Sbjct: 154 QNGYVDEAREVFDNM----PEKNSISWNG--LLAAYVHNGRIEEACLLFESKSDWDLISW 207
Query: 209 GA--HGFVIKRG-------FDS----EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
GFV K+ FD + NT+I YA+GG + +R++FD +D
Sbjct: 208 NCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVF 267
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
TW ++++ Y QNG+ EA FD+M + +V NA+ V Q
Sbjct: 268 TWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYV------------------Q 309
Query: 316 VIKMDLEESVIVG---------TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
KMD+ + ++I Y + G + ARK F+ M +++ SW A+IAGY
Sbjct: 310 TKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGY 369
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
EAL++F ++ + G N TF LS C+ ++ G G + G
Sbjct: 370 AQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG---KQIHGQAVKMGYG 426
Query: 427 VEHYGCMVD-----LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
GC V + + G + EA D EG++ K D V W ++L H
Sbjct: 427 T---GCFVGNALLAMYFKCGSIDEANDTFEGIEEK-DVVSWNTMLAGYARH 473
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 26/288 (9%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N ++ Y R + +R++FD M EKD V+WNS+++ YAQNG EA +VFD M +
Sbjct: 115 NVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK--- 171
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
N+++ + +L A H G + + + DL I ++ + + ++ AR
Sbjct: 172 --NSISWNGLLAAYVHNGRIEEACLLFESKSDWDL----ISWNCLMGGFVRKKKLGDARW 225
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F++M ++ SW MI+GY +A LF + V T+ +++S G+
Sbjct: 226 LFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDV----FTWTAMVSGYVQNGM 281
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ E + + M + + Y M+ + K+ A +L E M + + W ++
Sbjct: 282 LDEAKTFFDEMPEKNEVS-----YNAMIAGYVQTKKMDIARELFESMPCR-NISSWNTM- 334
Query: 467 GACRIHKNVDLGEIA-AKKLFELEPN-NCGYHVLLSNIYANAGRWEDV 512
I +G+IA A+K F++ P +C + YA +G +E+
Sbjct: 335 ----ITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEA 378
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/635 (38%), Positives = 366/635 (57%), Gaps = 68/635 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ DKN VF +N +I +AL + +M P T+PC +K+ S
Sbjct: 76 IFDEITDKNVVF-FNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSD 134
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G Q H G +++V + LI MY KC L +A+++ DEIP R++VSW SM
Sbjct: 135 SLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIP--CRDVVSWNSM 192
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ Y QN +AL L +E + N+ + +AS+L A + T + V
Sbjct: 193 VSVYAQNGRFNDALELCREM------------EALNLKPNDCTMASLLPAVTNTTSDNVL 240
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+++F + +K ++WN +IA+Y N
Sbjct: 241 ---------------------------------YVKEMFLKLTKKSVISWNVMIAMYVNN 267
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+ EA+ ++ QM ++ V+ + V++ +VL A L L LG+ +H + L ++++
Sbjct: 268 SMPKEAVVLYSQM-EANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLL 326
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++IDMY KCG + AR FNQM+ ++V SWT++I+ YG + R+A+ +F +M +G+
Sbjct: 327 ENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGL 386
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ I FVSVL+ACSHAGL+ +G ++ N M E I P +EH+ C+VDLLGRAGK+ EAY
Sbjct: 387 NPDSIAFVSVLAACSHAGLLDDGRYYFNLMA-ECGITPKLEHFACVVDLLGRAGKIDEAY 445
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I M ++ D VWG LL ACR++ N+++G +AA KL L P + GY+VLLSNIYA AG
Sbjct: 446 GFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAG 505
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RW DV RS+M+ + + K PG S VEL VH FL GD HPQ +KIYE L+ L K++
Sbjct: 506 RWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMK 565
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E+GY+ + S +HDV++E+KE L +HSEKLA NLRVCGDCH
Sbjct: 566 ELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHV 625
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LISK+ +REI++RD+ RFH+F++G CSCGDYW
Sbjct: 626 AAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 145/305 (47%), Gaps = 14/305 (4%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
VG L+ YA G ++R +FD + +K+ V +N +I Y N L +AL V+ M
Sbjct: 56 VGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQG 115
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
V + T VL A + L +G IH V+K+ L+ ++ VG +I MY KC + A
Sbjct: 116 FVP-DMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEA 174
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
++ +++ ++V SW +M++ Y + R +AL+L +M ++PN T S+L A ++
Sbjct: 175 QQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNT 234
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA---YDLIEGMKVKADFVV 461
+ ++ M + + V + M+ + KEA Y +E V+ D V
Sbjct: 235 --TSDNVLYVKEMFLKLT-KKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVS 291
Query: 462 WGSLLGACRIHKNVDLG----EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRS 517
S+L A + LG + A +K +L PN + L+ ++YA G D +
Sbjct: 292 IVSVLPAYGDLSALSLGRRVHKFAERK--KLLPNLLLENALI-DMYAKCGCLRDARAVFN 348
Query: 518 LMKNR 522
M+ R
Sbjct: 349 QMQFR 353
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK ++DQ ++ + VG ++ +Y CG+ LAR F+++ +KNV + MI Y
Sbjct: 42 GKVLNDQYLRWNPS----VGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVN 97
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
+ ++AL ++ M G P+ T+ VL A S + + W L G I +
Sbjct: 98 NHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSL---WVGLQIHGAVLKIGLDLN 154
Query: 429 HY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC----RIHKNVDL-GEIA 481
Y ++ + G+ LKEA +++ + + D V W S++ R + ++L E+
Sbjct: 155 LYVGNGLIAMYGKCKSLKEAQQVLDEIPCR-DVVSWNSMVSVYAQNGRFNDALELCREME 213
Query: 482 AKKLFELEPNNCGYHVLLSNI 502
A L+PN+C LL +
Sbjct: 214 A---LNLKPNDCTMASLLPAV 231
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/642 (37%), Positives = 383/642 (59%), Gaps = 66/642 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS--LTPTRSTFPCAIKSCSA 85
+F++ ++N V +WNS+I+ A+ G +AL F M++ + P + TF + C+
Sbjct: 232 VFDEMGERNQV-TWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCAN 290
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ + G+Q H +++ V + L+ MYS+CG L+ A+++F+ + +R N SW
Sbjct: 291 QRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAER--NAYSWN 348
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
SM+ GY QN +EAL LFK+ L + + D +++S+LS+C ++ +
Sbjct: 349 SMIEGYQQNGETQEALRLFKQMQL------------NGIKPDCFSLSSMLSSCVSLSDSQ 396
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT--WNSIIAI 263
H F+++ + E + L+D YA+ G +D + KV+D I+KD T WNSI+A
Sbjct: 397 KGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAG 456
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YA GL E+ + F +M++S D++ + +T+ + I +L VL
Sbjct: 457 YANKGLKKESFNHFLEMLES-DIEYDVLTM----VTIVNLLVLE---------------- 495
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
T+++DMY KCG + AR F+ M KN+ SW AMI+GY H ++EAL L+ +M
Sbjct: 496 -----TALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMP 550
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
K G+ PN +TF+++LSACSH GLV+EG +M ++NIE EHY CMVDLLGRAG+L
Sbjct: 551 KKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRL 610
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
++A + +E M ++ + WG+LLGACR+HK++D+G +AA++LFEL+P N G +V++SNIY
Sbjct: 611 EDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIY 670
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A AGRW++VE R +MK + + K PG S +E+ ++ F G K HP+ E+IY L L
Sbjct: 671 AAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLT 730
Query: 564 VKLQEVGYVTDMTSVIH---DVDQEEKEMTLRIHSEKLA------------------NLR 602
++ + +GY+ D + ++ D+ +EE+E L HSE+LA NLR
Sbjct: 731 LQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLR 790
Query: 603 VCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+CGDCHT + ISK+ R I+ RD+ RFH+F++G CSCGDYW
Sbjct: 791 ICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 250/499 (50%), Gaps = 37/499 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ +WN++I AR D +EA F M K+ + P TF A++ C AL G
Sbjct: 135 MPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGG 194
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H + GF D FV +ALIDMY+KC + K+FDE+ + RN V+W S+++
Sbjct: 195 KQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGE--RNQVTWNSIISAEA 252
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q + +AL+LF ++ESE D + D ++L+ C+ + H
Sbjct: 253 QFGHFNDALVLF--LRMQESE--------DGIQPDQFTFTTLLTLCANQRNDNQGRQIHA 302
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+I+ + V L+ Y+ G ++ ++++F+ M E++A +WNS+I Y QNG E
Sbjct: 303 HLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQE 362
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL +F QM + +K + +LS++L + L + G+ +H+ +++ +EE I+ ++
Sbjct: 363 ALRLFKQM-QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLV 421
Query: 333 DMYCKCGQVDLARKAFNQM--KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
DMY KCG +D A K ++Q K++N W +++AGY +E+ + F +M+++ + +
Sbjct: 422 DMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYD 481
Query: 391 YITFVSVLSAC----------SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+T V++++ S G + + + M + + + M+ +
Sbjct: 482 VLTMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGK-----NIVSWNAMISGYSKH 536
Query: 441 GKLKEAYDLIEGMKVKADF---VVWGSLLGACRIHKNVDLGE---IAAKKLFELEPNNCG 494
G KEA L E M K + V + ++L AC V+ G + ++ + +E
Sbjct: 537 GCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEA-KAE 595
Query: 495 YHVLLSNIYANAGRWEDVE 513
++ + ++ AGR ED +
Sbjct: 596 HYTCMVDLLGRAGRLEDAK 614
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 217/428 (50%), Gaps = 31/428 (7%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD---ARKLFDEIPQ 136
I+ C + GK H Q G++ D ++ + ++ +Y++ G L D ARKLF+E+P+
Sbjct: 78 IQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPE 137
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
RN+ +W +M+ Y + D+ EA +F L V D+ AS L
Sbjct: 138 --RNLTAWNTMILAYARVDDYMEAWGIFDRML------------KIGVCPDNFTFASALR 183
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
C + + H +I GF + VGN LID YA+ + KVFD M E++ VT
Sbjct: 184 VCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVT 243
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTD-VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
WNSII+ AQ G +AL +F +M +S D ++ + T + +L A+ G+ IH
Sbjct: 244 WNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAH 303
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+I+ ++ +++IV T ++ MY +CG+++ A++ FN+M E+N SW +MI GY + +EA
Sbjct: 304 LIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEA 363
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG---- 431
L LF +M G++P+ + S+LS+C Q+G H F + +E G
Sbjct: 364 LRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGREL-----HNFIVRNTMEEEGILQV 418
Query: 432 CMVDLLGRAGKLKEAYDLI-EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
+VD+ + G + A+ + + +K + +W S+L + N L + + E+
Sbjct: 419 VLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAG---YANKGLKKESFNHFLEMLE 475
Query: 491 NNCGYHVL 498
++ Y VL
Sbjct: 476 SDIEYDVL 483
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 150/324 (46%), Gaps = 43/324 (13%)
Query: 186 VDSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVD--- 240
V+ + +S++ C + N G H +I G++ + + ++ YAR G +D
Sbjct: 69 VNPLPYSSLIQDC--IDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLC 126
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+RK+F+ M E++ WN++I YA+ EA +FD+M+K V + T ++ L
Sbjct: 127 YARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLK-IGVCPDNFTFASALRVC 185
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
L GK +H ++I + VG ++IDMY KC + K F++M E+N +W
Sbjct: 186 GALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWN 245
Query: 361 AMIAGYGMHCRAREALDLFYKMIKA--GVRPNYITFVSVLSACS-----------HAGLV 407
++I+ +AL LF +M ++ G++P+ TF ++L+ C+ HA L+
Sbjct: 246 SIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLI 305
Query: 408 Q-----------EGWHW------LNTMGHEFN--IEPGVEHYGCMVDLLGRAGKLKEAYD 448
+ E H LN FN E + M++ + G+ +EA
Sbjct: 306 RANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALR 365
Query: 449 LIEGMK---VKADFVVWGSLLGAC 469
L + M+ +K D S+L +C
Sbjct: 366 LFKQMQLNGIKPDCFSLSSMLSSC 389
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/627 (40%), Positives = 370/627 (59%), Gaps = 50/627 (7%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
+NS+I L+ +EAL + +M + L P T+P IK+C+ G H
Sbjct: 163 YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVV 222
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
GF D ++ S+LI +Y+ +L A++LF+ R++VSW +M+ GYV++ A
Sbjct: 223 KSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLC--SARDVVSWNAMIDGYVKHVEMGHA 280
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
++F + + S N ++ AI V + E KR FD
Sbjct: 281 RMVFDRMVCRDVI-------SWNTMINGYAI-----------VGKIDEA------KRLFD 316
Query: 221 S----EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
+ N+++ + + G+V+ + +F M +D V+WNS++A YAQ G EAL +
Sbjct: 317 EMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALAL 376
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
FDQM ++ VK T+ ++L A AHLG L G +H + +E + IVGT+++DMY
Sbjct: 377 FDQM-RAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYA 435
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG++ LA + FN M+ K+V +W +IAG +H +EA LF +M +AGV PN ITFV+
Sbjct: 436 KCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVA 495
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+LSACSHAG+V EG L+ M + IEP VEHYGC++DLL RAG L+EA +LI M ++
Sbjct: 496 ILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPME 555
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
+ G+LLG CRIH N +LGE+ K+L L+P + G ++LLSNIYA A +W+D + R
Sbjct: 556 PNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVR 615
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE-VGYVTDM 575
+LMK ++K PG S++EL+G VH F+ GD HP+ KIYE L E++ +L+ +GY D
Sbjct: 616 NLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADT 675
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
+V+ D+++E+KE L +HSEKLA NLRVC DCH VI+LISKV
Sbjct: 676 GNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKV 735
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
REI+VRD RFH+F+DG CSC D+W
Sbjct: 736 YGREIIVRDRNRFHHFEDGECSCLDFW 762
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 141/323 (43%), Gaps = 63/323 (19%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SWNS++A A+ G EAL F MR + + PT +T + +C+ L L G H
Sbjct: 353 DVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLH 412
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+ V +AL+DMY+KCG++S A ++F+ + +++++W +++ G + N
Sbjct: 413 TYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMES--KDVLAWNTIIAGMAIHGN 470
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+EA LFKE E G E +D FV ++LSACS
Sbjct: 471 VKEAQQLFKEM----KEAG--VEPNDITFV------AILSACS----------------- 501
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-----IEKDAVTWNSIIAIYAQNGLAA 271
G VD +K+ D M IE + +I + A+ G
Sbjct: 502 ------------------HAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLE 543
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA+++ M ++ N L A+L G LG+ + ++I + S G I
Sbjct: 544 EAMELIGTM----PMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHS---GRYI 596
Query: 332 I--DMYCKCGQVDLARKAFNQMK 352
+ ++Y + D ARK N MK
Sbjct: 597 LLSNIYAAAKKWDDARKVRNLMK 619
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
T +FN ++ +V +WN++IA +A G+ EA + F M++ + P TF + +CS
Sbjct: 444 TQVFNA-MESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACS- 501
Query: 86 LHDLHSGKQAHQQAFI------FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
H+G Q + +G V +ID+ ++ G L +A +L +P
Sbjct: 502 ----HAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMP 553
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
A+ F+ ++ + ++I EAL L++ M+++G++P+++T+ V+ AC+
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
+ + W + H ++ G E ++ L L A L + D
Sbjct: 208 SSVT-----WFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSAR-DV 261
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFE--LEPNNCGYHVLLSNIYANAGRWEDVERTRS 517
V W +++ K+V++G A+ +F+ + + ++ ++ N YA G+ ++ +R
Sbjct: 262 VSWNAMIDG--YVKHVEMGH--ARMVFDRMVCRDVISWNTMI-NGYAIVGKIDEAKRLFD 316
Query: 518 LMKNRRL 524
M R L
Sbjct: 317 EMPERNL 323
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 253/635 (39%), Positives = 369/635 (58%), Gaps = 50/635 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ KN++ SWN ++A + G +A R F S L ++ C + +
Sbjct: 164 IFDEMPCKNSI-SWNGMLAAYVQNGRIEDARRLFESKADWELI----SWNCMMGGYVKRN 218
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L + + RD + +I Y++ GEL +A++LF+E P +R++ +WT+M
Sbjct: 219 RLVDARGIFDRMP----ERDEVSWNTMISGYAQNGELLEAQRLFEESP--VRDVFTWTAM 272
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GYVQN EA +F G +NS V AI + C R+ +
Sbjct: 273 VSGYVQNGMLDEARRVFD---------GMPEKNS----VSWNAIIAGYVQCKRM--DQAR 317
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
E + V NT+I YA+ G + +R FD M ++D+++W +IIA YAQ+
Sbjct: 318 ELFEAMPCQ-----NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQS 372
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EAL +F +M + + + N T ++ L A + L LGK +H +V+K LE V
Sbjct: 373 GYGEEALHLFVEMKRDGE-RLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYV 431
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G +++ MYCKCG +D A F ++EK V SW MIAGY H +EAL LF M K G+
Sbjct: 432 GNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGI 491
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ +T V VLSACSH GLV +G + +M ++ I +HY CM+DLLGRAG+L +A
Sbjct: 492 LPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQ 551
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+L++ M + D WG+LLGA RIH N +LGE AAK +FE+EP+N G +VLLSN+YA +G
Sbjct: 552 NLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASG 611
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RW DV R R M++R + K PG+S VE++ K+H F VGD HP+ ++IY +LEEL++K++
Sbjct: 612 RWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMK 671
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
+ GYV+ V+HDV++EEK L+ HSEKLA NLRVC DCH
Sbjct: 672 KEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHN 731
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
++ ISK+V R I++RDS RFH+F G CSCGDYW
Sbjct: 732 AMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 222/499 (44%), Gaps = 79/499 (15%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S+ + + K ST T + D + + WN I + R G ALR F+SM
Sbjct: 20 SLQTTTTANRKPSTRNQPKTTSSLATDAD-IVKWNIAITNHMRNGQCDSALRLFNSM--- 75
Query: 68 SLTPTRST--FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
P RS+ + I C + + +Q ++ RD+ + +I + L
Sbjct: 76 ---PRRSSISWNAMISGCLSNDKFYLARQLFEKMPT----RDLVSWNVMISGCVRYRNLR 128
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
AR LFD++P+R ++VSW +ML+GY QN +EA +F E +
Sbjct: 129 AARLLFDQMPER--DVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK--------------- 171
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+S++ +L+A NG E A + D E+ N ++ Y + + +R +
Sbjct: 172 -NSISWNGMLAA---YVQNGRIEDARRLFESKA-DWELISWNCMMGGYVKRNRLVDARGI 226
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD M E+D V+WN++I+ YAQNG EA +F++ + V+ + T +A++ G+
Sbjct: 227 FDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE----SPVR-DVFTWTAMVSGYVQNGM 281
Query: 306 LRLGKCIHD------------------QVIKMDLE---------ESVIVGTSIIDMYCKC 338
L + + D Q +MD ++V ++I Y +
Sbjct: 282 LDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQN 341
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G + AR F++M +++ SW A+IAGY EAL LF +M + G R N TF S L
Sbjct: 342 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTL 401
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD-----LLGRAGKLKEAYDLIEGM 453
S C+ ++ L H ++ G+E GC V + + G + +AY + EG+
Sbjct: 402 STCAEIAALE-----LGKQVHGRVVKAGLES-GCYVGNALLVMYCKCGNIDDAYIVFEGI 455
Query: 454 KVKADFVVWGSLLGACRIH 472
+ K + V W +++ H
Sbjct: 456 EEK-EVVSWNTMIAGYARH 473
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 106/505 (20%), Positives = 211/505 (41%), Gaps = 96/505 (19%)
Query: 50 RGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVF 109
RG + L + S +R L T T + P S + + D+
Sbjct: 4 RGSNRFRQLHSRSCLRSLQTTTTANRKP-------------STRNQPKTTSSLATDADIV 50
Query: 110 VSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLL 169
+ I + + G+ A +LF+ +P+R + +SW +M++G + ND A LF++
Sbjct: 51 KWNIAITNHMRNGQCDSALRLFNSMPRR--SSISWNAMISGCLSNDKFYLARQLFEKMPT 108
Query: 170 EESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTL 229
D V+ ++S C R
Sbjct: 109 R----------------DLVSWNVMISGCVRYR--------------------------- 125
Query: 230 IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC- 288
++ +R +FD M E+D V+WN++++ YAQNG EA ++FD+M C
Sbjct: 126 --------NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM------PCK 171
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
N+++ + +L A G + + + + K D E +I ++ Y K ++ AR F
Sbjct: 172 NSISWNGMLAAYVQNGRIEDARRLFES--KADWE--LISWNCMMGGYVKRNRLVDARGIF 227
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
++M E++ SW MI+GY + EA LF ++ VR + T+ +++S G++
Sbjct: 228 DRMPERDEVSWNTMISGYAQNGELLEAQRLFE---ESPVR-DVFTWTAMVSGYVQNGMLD 283
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
E + M + ++ + ++ + ++ +A +L E M + + W +++
Sbjct: 284 EARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITG 337
Query: 469 CRIHKNVDLGEIAAKKLFELEP--NNCGYHVLLSNIYANAGRWEDVERTRSLMK--NRRL 524
+N D+ + A+ F+ P ++ + +++ YA +G E+ MK RL
Sbjct: 338 --YAQNGDIAQ--ARNFFDRMPQRDSISWAAIIAG-YAQSGYGEEALHLFVEMKRDGERL 392
Query: 525 AKTPGFSLVELRGKVHAFLVGDKEH 549
++ S + ++ A +G + H
Sbjct: 393 NRSTFTSTLSTCAEIAALELGKQVH 417
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 261/725 (36%), Positives = 392/725 (54%), Gaps = 94/725 (12%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M L + S ++V+S K + F++ +++V SW ++I G +A+R
Sbjct: 75 MPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSV-SWTTMIVGYKNIGQYHKAIRI 133
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
M + + P++ T + S +A L +GK+ H G +V VS++L++MY+K
Sbjct: 134 MGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 121 CGELSDARKLFDEIPQR-----------------------------IRNIVSWTSMLTGY 151
CG+ A+ +FD + + R+IV+W SM++GY
Sbjct: 194 CGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGY 253
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
Q AL +F + L + + D +ASVLSAC+ + + E H
Sbjct: 254 NQRGYDLRALDMFSKMLRDSM-----------LSPDRFTLASVLSACANLEKLCIGEQIH 302
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK--------------------------- 244
++ GFD V N LI Y+R G V+ +R+
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 245 ------VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
+FD + ++D V W ++I Y Q+GL EA+++F MV + + N+ TL+A+L
Sbjct: 363 MNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMV-GEEQRPNSYTLAAMLS 421
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVR 357
+ L L GK IH +K SV V ++I MY K G + A +AF+ ++ E++
Sbjct: 422 VASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTV 481
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SWT+MI H A EAL+LF M+ G+RP++IT+V V SAC+HAGLV +G + + M
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMM 541
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
I P + HY CMVDL GRAG L+EA + IE M ++ D V WGSLL ACR++KN+DL
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDL 601
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG 537
G++AA++L LEP N G + L+N+Y+ G+WE+ + R MK+ R+ K GFS +E++
Sbjct: 602 GKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKH 661
Query: 538 KVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
KVHAF V D HPQ +IY ++++ +++++GYV D SV+HD+++E KE LR HSEK
Sbjct: 662 KVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEK 721
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA NLRVC DCHT I+ ISK+V REI+VRD+ RFH+FKDG CS
Sbjct: 722 LAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCS 781
Query: 640 CGDYW 644
C DYW
Sbjct: 782 CRDYW 786
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 135/523 (25%), Positives = 221/523 (42%), Gaps = 134/523 (25%)
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI-- 138
KS + + + + H + G V++ + L+++YSK G ARKLFDE+P R
Sbjct: 22 KSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81
Query: 139 ---------------------------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
R+ VSWT+M+ GY +A+ + E + E
Sbjct: 82 SWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREG 141
Query: 172 SECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLID 231
E + F + +ASV A +R G + H F++K G V V N+L++
Sbjct: 142 IE--------PSQFTLTNVLASV--AATRCLETG--KKVHSFIVKLGLRGNVSVSNSLLN 189
Query: 232 AYARGGHVDVSRKVFDGMI-------------------------------EKDAVTWNSI 260
YA+ G +++ VFD M+ E+D VTWNS+
Sbjct: 190 MYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSM 249
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
I+ Y Q G ALD+F +M++ + + + TL++VL A A+L L +G+ IH ++
Sbjct: 250 ISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTG 309
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARK---------------------------------A 347
+ S IV ++I MY +CG V+ AR+
Sbjct: 310 FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNI 369
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F+ +K+++V +WTAMI GY H EA++LF M+ RPN T ++LS S
Sbjct: 370 FDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASS---- 425
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYG---------CMVDLLGRAGKLKEAYDLIEGMKVKAD 458
L ++GH I G ++ + +AG + A + ++ + D
Sbjct: 426 ------LASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERD 479
Query: 459 FVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGY 495
V W S++ A H + + A +LFE L P++ Y
Sbjct: 480 TVSWTSMIIALAQHGHAE----EALELFETMLMEGLRPDHITY 518
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 129/286 (45%), Gaps = 70/286 (24%)
Query: 188 SVAIASVLSACSRVTVNGVTEG--------AHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
++++++L C+ + V + H VIK G V + N L++ Y++ G+
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYA 65
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV-------- 291
+RK+FD M + A +WN++++ YA+ G + + FD++ + V +
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIG 125
Query: 292 ----------------------TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
TL+ VL ++A L GK +H ++K+ L +V V
Sbjct: 126 QYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSN 185
Query: 330 SIIDMYCKC-------------------------------GQVDLARKAFNQMKEKNVRS 358
S+++MY KC GQ+DLA F QM E+++ +
Sbjct: 186 SLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVT 245
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIK-AGVRPNYITFVSVLSACSH 403
W +MI+GY ALD+F KM++ + + P+ T SVLSAC++
Sbjct: 246 WNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACAN 291
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/606 (39%), Positives = 359/606 (59%), Gaps = 35/606 (5%)
Query: 58 LRAFSSMRKLSLTPT-RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
LR S+ + S P R + +K C+ L G+ H F D+ + + L++
Sbjct: 44 LRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLN 103
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY+KCG L +ARK+F+++PQR + V+WT++++GY Q+D +ALL F + L G
Sbjct: 104 MYAKCGSLEEARKVFEKMPQR--DFVTWTTLISGYSQHDRPCDALLFFNQMLR-----FG 156
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
S N ++SV+ A + HGF +K GFDS V VG+ L+D Y R
Sbjct: 157 YSPNE-------FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRY 209
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G +D ++ VFD + ++ V+WN++IA +A+ +AL++F M++ + + + +++
Sbjct: 210 GLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD-GFRPSHFSYASL 268
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
A + G L GK +H +IK + G +++DMY K G + ARK F+++ +++V
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW +++ Y H +EA+ F +M + G+RPN I+F+SVL+ACSH+GL+ EGWH+
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M + I P HY +VDLLGRAG L A IE M ++ +W +LL ACR+HKN +
Sbjct: 389 MKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
LG AA+ +FEL+P++ G HV+L NIYA+ GRW D R R MK + K P S VE+
Sbjct: 448 LGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIE 507
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
+H F+ D+ HPQ E+I EE+ K++E+GYV D + VI VDQ+E+E+ L+ HSE
Sbjct: 508 NAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSE 567
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
K+A N+RVCGDCHT I+L SKVV REI+VRD+ RFH+FKDG C
Sbjct: 568 KIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNC 627
Query: 639 SCGDYW 644
SC DYW
Sbjct: 628 SCKDYW 633
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 169/343 (49%), Gaps = 17/343 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F K ++ V +W ++I+ ++ +AL F+ M + +P T IK+ +A
Sbjct: 117 VFEKMPQRDFV-TWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G Q H GF +V V SAL+D+Y++ G + DA+ +FD + RN VSW ++
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES--RNDVSWNAL 233
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + +AL LF+ L D + AS+ ACS
Sbjct: 234 IAGHARRSGTEKALELFQGML------------RDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H ++IK G GNTL+D YA+ G + +RK+FD + ++D V+WNS++ YAQ+
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 341
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EA+ F++M + ++ N ++ +VL A +H G+L G ++ + K +
Sbjct: 342 GFGKEAVWWFEEM-RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWH 400
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+++D+ + G ++ A + +M E W A++ MH
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 255/638 (39%), Positives = 387/638 (60%), Gaps = 40/638 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +K+N+ +WNS+IA + G EAL+ F ++ +L P + + + L
Sbjct: 169 IFDELDEKDNI-TWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLG 227
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L +GK+ H A ++ + + LIDMYSKC ++ A +FD++ + +++SWT++
Sbjct: 228 YLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINK--DLISWTTV 285
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y QN+ EAL L ++ + + VD++ I S L ACS +
Sbjct: 286 IAAYAQNNCHTEALKLLRKV------------QTKGMDVDTMMIGSTLLACSGLRCLSHA 333
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG+ +KRG S++ + N +ID YA G+++ + ++F+ + KD V+W S+I+ Y N
Sbjct: 334 KEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHN 392
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD--LEESV 325
GLA EAL VF ++K T V+ +++TL ++L A A L L GK IH + + LE S
Sbjct: 393 GLANEALGVF-YLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGST 451
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+ S++DMY CG ++ A K F + K++ WT MI YGMH R + A++LF M
Sbjct: 452 V--NSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQ 509
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
+ P++ITF+++L ACSH+GL+ EG L TM ++ +EP EHY C+VDLLGRA L+E
Sbjct: 510 KLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEE 569
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
AY ++ M+++ VW + LGACRIH N LGEIAA+KL +L+P++ G +VL+SN++A
Sbjct: 570 AYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAA 629
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
+GRW+DVE R MK L K PG S +E+ KVH FLV DK HP+ KIY+ L ++ K
Sbjct: 630 SGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEK 689
Query: 566 LQ-EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
L+ E GYV V+H+V +EEK L HSE+LA NLRVC D
Sbjct: 690 LEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVCVD 749
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CHT +L+SK +RE++VRD+ RFH+F+DG+CSCGD+W
Sbjct: 750 CHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 146/469 (31%), Positives = 244/469 (52%), Gaps = 30/469 (6%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S+VS K + LF++ ++N+V SWNS+I+ + G +EAL F M+K +
Sbjct: 49 NSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGV 108
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
T A+++C G + H DV+V++AL+ M+ + G++S A +
Sbjct: 109 GANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAAR 168
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FDE+ + ++ ++W SM+ G+ QN EAL F CG N+ D V
Sbjct: 169 IFDELDE--KDNITWNSMIAGFTQNGLYNEALQFF---------CG---LQDANLKPDEV 214
Query: 190 AIASVLSACSRV--TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
++ S+L+A R+ +NG + H + +K DS + +GNTLID Y++ V + VFD
Sbjct: 215 SLISILAASGRLGYLLNG--KEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFD 272
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
MI KD ++W ++IA YAQN EAL + + V++ + + + + + LLA + L L
Sbjct: 273 KMINKDLISWTTVIAAYAQNNCHTEALKLLRK-VQTKGMDVDTMMIGSTLLACSGLRCLS 331
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
K +H +K L + +++ IID+Y CG ++ A + F +K K+V SWT+MI+ Y
Sbjct: 332 HAKEVHGYTLKRGLSD-LMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYV 390
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+ A EAL +FY M + V P+ IT VS+LSA + + +G H F G
Sbjct: 391 HNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEI-----HGFIFRKGF 445
Query: 428 EHYG----CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G +VD+ G L+ AY + + K+ V+W +++ A +H
Sbjct: 446 MLEGSTVNSLVDMYACCGSLENAYKVFICTRSKS-LVLWTTMINAYGMH 493
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 138/441 (31%), Positives = 221/441 (50%), Gaps = 39/441 (8%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
MR L + TFPC +K+C + D+H G + H G+ VFV+++L+ MY+KC +
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ ARKLFD + +R ++VSW S+++ Y N EAL LF+E
Sbjct: 61 ILGARKLFDRMNER-NDVVSWNSIISAYSLNGQCMEALGLFREM------------QKAG 107
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V ++ + + L AC + + H ++K +V V N L+ + R G + +
Sbjct: 108 VGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAA 167
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
++FD + EKD +TWNS+IA + QNGL EAL F + + ++K + V+L ++L A L
Sbjct: 168 RIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGL-QDANLKPDEVSLISILAASGRL 226
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G L GK IH +K L+ ++ +G ++IDMY KC V A F++M K++ SWT +I
Sbjct: 227 GYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVI 286
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC------SHAGLVQEGWHWLNTM 417
A Y + EAL L K+ G+ + + S L AC SHA V
Sbjct: 287 AAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEV---------- 336
Query: 418 GHEFNIEPGVEHY---GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK- 473
H + ++ G+ ++D+ G + A + E +K K D V W S++ +C +H
Sbjct: 337 -HGYTLKRGLSDLMMQNMIIDVYADCGNINYATRMFESIKCK-DVVSWTSMI-SCYVHNG 393
Query: 474 --NVDLGEIAAKKLFELEPNN 492
N LG K +EP++
Sbjct: 394 LANEALGVFYLMKETSVEPDS 414
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 20/258 (7%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
+ +++ +V N N T + + +V SW S+I+ G + EAL F M++ S
Sbjct: 350 MQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETS 409
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
+ P T + + ++L L+ GK+ H F GF + ++L+DMY+ CG L +A
Sbjct: 410 VEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAY 469
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
K+F I R +++V WT+M+ Y + + A+ LF ++E+ + + D
Sbjct: 470 KVF--ICTRSKSLVLWTTMINAYGMHGRGKAAVELFS--IMEDQK----------LIPDH 515
Query: 189 VAIASVLSACSRVTVNGVTEGAHGF-VIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKV 245
+ ++L ACS + + EG +K + E + L+D R H++ +
Sbjct: 516 ITFLALLYACSHSGL--INEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHF 573
Query: 246 FDGM-IEKDAVTWNSIIA 262
M IE A W + +
Sbjct: 574 VKSMQIEPTAEVWCAFLG 591
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 247/628 (39%), Positives = 367/628 (58%), Gaps = 67/628 (10%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N F N+++ A G S EA+ + M+++ + T+P +K C++ G+ H
Sbjct: 96 NSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVH 155
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Q GF D+FV +AL+DMY+KCGE+ DA ++FD + IR++V WT+M+T Y Q +
Sbjct: 156 GQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRM--LIRDVVCWTAMITLYEQAER 213
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+AL+LF++ + EE G D + SV SA
Sbjct: 214 PLKALMLFRK-MQEEGFLG-----------DEITAISVASAVG----------------- 244
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
++G G I +R VFD M E++ ++WNS+++ Y QNG +AL +
Sbjct: 245 -----QLGDGRMAISR---------ARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSL 290
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F+QM ++++ N VT ++ A ++LG LG+ +H+ VI ++ + +I+DMY
Sbjct: 291 FNQM-QASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYM 349
Query: 337 KCGQVDLARKAFN--QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
KCG +D A + FN ++ E++V SW +I+GYG+H +EAL+LF +M GV PN ITF
Sbjct: 350 KCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITF 409
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
S+LSACSHAGL+ EG M + ++ P ++HY CMVD+LGRAG L EA+ LI+ +
Sbjct: 410 TSILSACSHAGLIDEGRKCFADMT-KLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIP 468
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
+ VWG+LL ACRIH N +LGEIAA LF+LEP + GY+VL+SNIYA + +W++VE
Sbjct: 469 SRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEM 528
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTD 574
R MK+R L K FS++E +VH F D+ P + ++Y +E L ++++ VGYV D
Sbjct: 529 VRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPD 588
Query: 575 MTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISK 616
++ V+HDV+ E+KE L HSEKLA NLRVC DCH + IS
Sbjct: 589 LSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISS 648
Query: 617 VVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ R+I+VRD RFH+F+ G CSCGDYW
Sbjct: 649 IYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 202/462 (43%), Gaps = 63/462 (13%)
Query: 52 GDSVEALRAFSSMRK-LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF--HRDV 108
G AL S K L+L + ++ C++L L K H GF H
Sbjct: 3 GLKSRALHHLSHTHKVLALPSLHHFYDHLLQCCTSLTTL---KLIHSSLSTRGFLLHTPH 59
Query: 109 FVSSALIDMYSKCGELSDARKLFD------EIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
F++ LI +YSK G+L AR LFD + N +ML Y + EA+
Sbjct: 60 FLAR-LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAID 118
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE 222
L+ ++ G V++ VL C+ E HG V++ GF S+
Sbjct: 119 LY--IYMQRMGVG----------VNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSD 166
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
+ V L+D YA+ G + + +VFD M+ +D V W ++I +Y Q +AL +F +M +
Sbjct: 167 LFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKM-Q 225
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
+ +T +V A+ LG R+ +
Sbjct: 226 EEGFLGDEITAISVASAVGQLGDGRMA-------------------------------IS 254
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
AR F++M+E+N SW +M++GY + R +AL LF +M + PN +T + ++SACS
Sbjct: 255 RARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACS 314
Query: 403 HAGLVQEGWHWLN-TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV-KADFV 460
+ G G N + + +I+ + + ++D+ + G L A ++ ++ + D
Sbjct: 315 YLGSKHLGRKLHNFVISSKMDIDTTLRN--AIMDMYMKCGDLDTAVEMFNNCELGERDVS 372
Query: 461 VWGSLLGACRIHKN-VDLGEIAAKKLFE-LEPNNCGYHVLLS 500
W L+ +H + + E+ ++ E +EPN+ + +LS
Sbjct: 373 SWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILS 414
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 17/257 (6%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
SV+S V + + L +++ N SWNS+++ + G +AL F+ M+
Sbjct: 238 SVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQAS 297
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
P T + +CS L H G++ H D + +A++DMY KCG+L A
Sbjct: 298 ECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTA 357
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
++F+ R++ SW +++GY + + +EAL LF +E E +
Sbjct: 358 VEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVE------------PN 405
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGF--VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+ S+LSACS + + EG F + K E+ ++D R G ++ + ++
Sbjct: 406 DITFTSILSACSHAGL--IDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRL 463
Query: 246 FDGMIEKDA-VTWNSII 261
+ + + W +++
Sbjct: 464 IKKIPSRPSDEVWGALL 480
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 263/671 (39%), Positives = 373/671 (55%), Gaps = 64/671 (9%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKL---SLTPTRS---TFPCAIKSCSALHDL 89
++V SWNS+++ + ++ AL FS M + T RS + + +C +L +
Sbjct: 184 DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAV 243
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
K+ H A G DVFV +ALID Y+KCG + +A K+F+ + +++VSW +M+
Sbjct: 244 PQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMM--EFKDVVSWNAMVA 301
Query: 150 GYVQNDNAREALLLFKEFLLEESECG--------------GASENSDNVF---------V 186
GY Q+ N + A LFK E G S + NVF
Sbjct: 302 GYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLP 361
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKR----------GFDSEVGVGNTLIDAYARG 236
+ V I SVLSAC+ + H + +K G D ++ V N LID Y++
Sbjct: 362 NCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC 421
Query: 237 GHVDVSRKVFDGMI--EKDAVTWNSIIAIYAQNGLAAEALDVFDQMV-KSTDVKCNAVTL 293
+R +FD + E++ VTW +I +AQ G + +AL +F +M+ + V NA T+
Sbjct: 422 RSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTI 481
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEES--VIVGTSIIDMYCKCGQVDLARKAFNQM 351
S +L+A AHL +R+GK IH V++ +S V +I+MY KCG VD AR F+ M
Sbjct: 482 SCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSM 541
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
+K+ SWT+M+ GYGMH R EALD+F KM KAG P+ ITF+ VL ACSH G+V +G
Sbjct: 542 SQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGL 601
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
+ ++M ++ + P EHY +DLL R G+L +A+ ++ M ++ VVW +LL ACR+
Sbjct: 602 SYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRV 661
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFS 531
H NV+L E A KL E+ N G + L+SNIYA AGRW+DV R R LMK + K PG S
Sbjct: 662 HSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 721
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTL 591
V+ + +F VGD+ HP +IY LE L +++ +GYV + +HDVD+EEK L
Sbjct: 722 WVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLL 781
Query: 592 RIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF 633
HSEKLA NLRVCGDCH+ ISK+VD EIVVRD RFH+F
Sbjct: 782 VEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHF 841
Query: 634 KDGLCSCGDYW 644
K+G CSCG YW
Sbjct: 842 KNGSCSCGGYW 852
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/502 (30%), Positives = 236/502 (47%), Gaps = 61/502 (12%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
T+ L + V + WN +I + + G A+ M + T P +K+
Sbjct: 67 TDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKA 126
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR-IRNI 141
C L G H GF +VF+ +AL+ MYS+CG L +A +FDEI QR I ++
Sbjct: 127 CGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDV 186
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
+SW S+++ +V++ NA AL LF + L E N D ++I ++L AC +
Sbjct: 187 ISWNSIVSAHVKSSNAWTALDLFSKMTLI------VHEKPTNERSDIISIVNILPACGSL 240
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM------------ 249
T+ HG I+ G +V VGN LIDAYA+ G ++ + KVF+ M
Sbjct: 241 KAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 300
Query: 250 -----------------------IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
I D VTW ++IA Y+Q G + EAL+VF QM+ S +
Sbjct: 301 AGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSL 360
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL----------EESVIVGTSIIDMYC 336
N VT+ +VL A A LG G IH +K L +E ++V ++IDMY
Sbjct: 361 P-NCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 419
Query: 337 KCGQVDLARKAFN--QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI--KAGVRPNYI 392
KC AR F+ ++E+NV +WT MI G+ + + +AL LF +MI GV PN
Sbjct: 420 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 479
Query: 393 TFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
T +L AC+H ++ G H H+++ C++++ + G + A +
Sbjct: 480 TISCILMACAHLAAIRIGKQIHAYVLRHHQYD-SSAYFVANCLINMYSKCGDVDTARHVF 538
Query: 451 EGMKVKADFVVWGSLLGACRIH 472
+ M K+ + W S++ +H
Sbjct: 539 DSMSQKSA-ISWTSMMTGYGMH 559
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 31/266 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPCAIKSCSALHDLH 90
+++ NV +W +I A+ GDS +AL+ F M + P T C + +C+ L +
Sbjct: 436 LEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIR 495
Query: 91 SGKQAHQQAFIFGFHR----DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
GKQ H A++ H+ FV++ LI+MYSKCG++ AR +FD + Q ++ +SWTS
Sbjct: 496 IGKQIH--AYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQ--KSAISWTS 551
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+TGY + EAL +F + D + VL ACS + V
Sbjct: 552 MMTGYGMHGRGSEALDIFDKM------------RKAGFVPDDITFLVVLYACSHCGM--V 597
Query: 207 TEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
+G F G ID AR G +D + K M +E AV W ++++
Sbjct: 598 DQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLS 657
Query: 263 ---IYAQNGLAAEALDVFDQMVKSTD 285
+++ LA AL+ +M D
Sbjct: 658 ACRVHSNVELAEHALNKLVEMNAEND 683
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 123/296 (41%), Gaps = 53/296 (17%)
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
F S +G ++ +Y G D + V + + AV WN +I + + G A++V
Sbjct: 47 FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
+M+++ + + TL VL A L R G H + E +V + +++ MY +C
Sbjct: 107 RMLRA-GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 165
Query: 339 GQVDLARKAFNQMKEK---NVRSWTAMIAGYGMHCRAREALDLFYKMI------KAGVRP 389
G ++ A F+++ ++ +V SW ++++ + A ALDLF KM R
Sbjct: 166 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 225
Query: 390 NYITFVSVLSAC-----------------------------------SHAGLVQEGWHWL 414
+ I+ V++L AC + GL++
Sbjct: 226 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF 285
Query: 415 NTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK---VKADFVVWGSLLG 467
N M EF V + MV ++G K A++L + M+ + D V W +++
Sbjct: 286 NMM--EFK---DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIA 336
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
+GT ++ Y CG D A ++ W +I + R A+++ +M++AG
Sbjct: 53 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112
Query: 387 VRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
R ++ T VL AC + G +H L E V +V + R G L+
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCN---GFESNVFICNALVAMYSRCGSLE 169
Query: 445 EAYDLIEGMKVKA--DFVVWGSLLGA 468
EA + + + + D + W S++ A
Sbjct: 170 EASMIFDEITQRGIDDVISWNSIVSA 195
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 62/159 (38%), Gaps = 12/159 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + SW S++ G EAL F MRK P TF + +CS H G
Sbjct: 541 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS-----HCG 595
Query: 93 KQAHQQAFIFGFHRDVFVS------SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
++ D ++ + ID+ ++ G L A K ++P +V W +
Sbjct: 596 MVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVV-WVA 654
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
+L+ + N A + + +E G+ N++
Sbjct: 655 LLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIY 693
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/630 (38%), Positives = 363/630 (57%), Gaps = 33/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++ ++ SW ++A E+L+ FS MR + P TF +K+C L + G
Sbjct: 206 IEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVG 265
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K H AF + ++FV LID+Y K G++ DA ++F+E+P+ +++ W+ M+ Y
Sbjct: 266 KAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKD--DVIPWSFMIARYA 323
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q++ + EA+ +F V + +AS+L AC+ + + H
Sbjct: 324 QSEQSEEAIEMFCRM------------RRGLVLPNQFTLASLLQACASLVDLQLGNQIHC 371
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V+K G D V V N L+D YA+ G ++ S ++F V+WN++I Y Q G +
Sbjct: 372 HVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEK 431
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL +F M++ V+ VT S+VL A A + L G IH +K +++ +VG ++I
Sbjct: 432 ALILFKDMLE-CQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALI 490
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG + AR F+ ++E + SW AMI+GY +H EAL F M++ +P+ +
Sbjct: 491 DMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKV 550
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TFV +LSACS+AGL+ G + +M E++IEP EHY CMV LLGR+G L +A L+
Sbjct: 551 TFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHE 610
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
+ + +VW +LL AC IH +V+LG I+A+++ E+EP + HVLLSNIYANA RW +V
Sbjct: 611 IPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNV 670
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R+ MK + + K PG S +E +G+VH F VGD HP + I LE LN+K + GYV
Sbjct: 671 ASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYV 730
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D +SV+ DV+ +KE L +HSE+LA NLR+C DCH I+LI
Sbjct: 731 PDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLI 790
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+V R+I++RD RFH+F +G+CSCGDYW
Sbjct: 791 SKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 204/410 (49%), Gaps = 19/410 (4%)
Query: 59 RAFSSMRKLSLTPTRSTF--PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
R+F + R +P +T+ ++SC D +GK H + G D+F ++ L++
Sbjct: 28 RSFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLN 87
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
Y K L DA KLFDE+P RN VS+ +++ GY Q EA+ LF E E
Sbjct: 88 FYVKYDSLPDAAKLFDEMPD--RNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHEL-- 143
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
N FV S + ++SA + H V K GFDS+ VG LID Y+
Sbjct: 144 ------NPFVFSTVLKLLVSA----EWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVC 193
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G+ + +R+VFD + KD V+W ++A Y +N E+L +F +M + K N T ++V
Sbjct: 194 GYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRM-RIVGFKPNNFTFASV 252
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A L V +GK +H K E + VG +ID+Y K G VD A + F +M + +V
Sbjct: 253 LKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDV 312
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
W+ MIA Y ++ EA+++F +M + V PN T S+L AC+ +Q G + ++
Sbjct: 313 IPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLG-NQIHC 371
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ ++ V ++D+ + G+++ + L D V W +++
Sbjct: 372 HVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTD-VSWNTVI 420
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 95/241 (39%), Gaps = 19/241 (7%)
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N+ + I Q A Q + + N ++L + G GK +H ++I
Sbjct: 19 NTALCIITQRSFLA-------QRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEII 71
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
K + +++ Y K + A K F++M ++N S+ +I GY R EA+
Sbjct: 72 KKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIG 131
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH---WLNTMGHEFNIEPGVEHYGCMV 434
LF ++ G N F +VL A + G+ + +G + + G C
Sbjct: 132 LFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCY- 190
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV---DLGEIAAKKLFELEPN 491
+ G A ++ +D IE D V W ++ AC + L + ++ +PN
Sbjct: 191 SVCGYAECARQVFDAIE----YKDMVSWTGMV-ACYVENECFEESLKLFSRMRIVGFKPN 245
Query: 492 N 492
N
Sbjct: 246 N 246
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/594 (39%), Positives = 352/594 (59%), Gaps = 32/594 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+ C G++ H + VF+ + LI +Y+KC L DA +FDE+P+R
Sbjct: 250 LNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPER-- 307
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKE---------FLLEESECGGASENSDNVFVDSVA 190
N+VSWT+M++ Y Q A +AL LF + +++ + + +
Sbjct: 308 NVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFT 367
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
A+VL++C+ + H +IK ++ V VG++L+D YA+ G + +R VF+ +
Sbjct: 368 FATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLP 427
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
E+D V+ +II+ YAQ GL EAL++F ++ + +K N VT + VL A++ L L LGK
Sbjct: 428 ERDVVSCTAIISGYAQLGLDEEALELFRRL-QGEGMKSNYVTYTGVLTALSGLAALDLGK 486
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
+H+ V++ ++ V++ S+IDMY KCG + +R+ F+ M E+ V SW AM+ GY H
Sbjct: 487 QVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHG 546
Query: 371 RAREALDLFYKMIK-AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH-EFNIEPGVE 428
RE L LF M + V+P+ +T ++VLS CSH GL +G + N M + +EP +E
Sbjct: 547 EGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKME 606
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HYGC+VDLLGR+G+++EA++ I+ M + +WGSLLGACR+H NVD+GE A ++L E+
Sbjct: 607 HYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEI 666
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
EP N G +V+LSN+YA+AGRWEDV R LM + + K PG S +EL +H F D+
Sbjct: 667 EPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRS 726
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
HP+ E+I ++EL+ +EVGYV D++ V+HDVD+E+KE L HSEKLA
Sbjct: 727 HPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASP 786
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH + ISKV RE+ +RD RFH G CSC DYW
Sbjct: 787 ASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 185/370 (50%), Gaps = 42/370 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT---------------------P 71
+ + NV SW ++I+ ++ G + +AL F + K+SLT P
Sbjct: 304 MPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEP 363
Query: 72 TRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLF 131
TF + SC++ G+Q H + VFV S+L+DMY+K G++ +AR +F
Sbjct: 364 NEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVF 423
Query: 132 DEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAI 191
+ +P+ R++VS T++++GY Q EAL LF+ E G N V
Sbjct: 424 ECLPE--RDVVSCTAIISGYAQLGLDEEALELFRRLQGE-----GMKSN-------YVTY 469
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
VL+A S + + + H V++ S V + N+LID Y++ G++ SR++FD M E
Sbjct: 470 TGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYE 529
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
+ ++WN+++ Y+++G E L +F M + T VK ++VT+ AVL +H G+ G
Sbjct: 530 RTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLN 589
Query: 312 IHDQVI--KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGM 368
I + + K+++E + ++D+ + G+V+ A + +M E W +++
Sbjct: 590 IFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGA--- 646
Query: 369 HCRAREALDL 378
CR +D+
Sbjct: 647 -CRVHSNVDI 655
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 174/373 (46%), Gaps = 44/373 (11%)
Query: 130 LFDEIPQRIRNIV-------------SWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
++D++P IR ++ S + LT +V N+R L++
Sbjct: 175 VYDDVPSCIRYLILTLPIIIHQGCFNSKSMFLTRHVFPSNSRTLSTFTTHIHLQQPLLQM 234
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYA 234
A + F + AI L+ C V EG H +IK + V + LI Y
Sbjct: 235 ALHGFNMKFENYNAI---LNEC--VNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYT 289
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF--DQMVKSTDV------ 286
+ + + VFD M E++ V+W ++I+ Y+Q G A++AL++F D + T V
Sbjct: 290 KCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKL 349
Query: 287 ------------KCNAVTLSAVLLA-IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+ N T + VL + + LG + LG+ IH +IK++ E+ V VG+S++D
Sbjct: 350 KLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFI-LGRQIHSLIIKLNYEDHVFVGSSLLD 408
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY K G++ AR F + E++V S TA+I+GY EAL+LF ++ G++ NY+T
Sbjct: 409 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 468
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
+ VL+A S + G N + I V ++D+ + G L + + + M
Sbjct: 469 YTGVLTALSGLAALDLGKQVHNHVLRS-EIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTM 527
Query: 454 KVKADFVVWGSLL 466
+ + W ++L
Sbjct: 528 YERT-VISWNAML 539
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 258/666 (38%), Positives = 366/666 (54%), Gaps = 80/666 (12%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLT-----TLFNKYVDKNNVFSWNSVIADLARGGDSVEA 57
L S S+V + STN L+ +F+ +V K NVF WN +I + +A
Sbjct: 64 LQDSYIAGSLVKSYANVSTNRYLSFESSLRVFD-FVRKPNVFLWNCMIKVCIENNEPFKA 122
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM 117
+ + M P + T+P +K+CS + G Q H G D + S+ I M
Sbjct: 123 ILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRM 182
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
Y+ G L +AR++ D+ + + V W +M+ GY L F E
Sbjct: 183 YASFGRLVEARRILDDKGGEV-DAVCWNAMIDGY----------LRFGEV---------- 221
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
+R G+ + S + N +I ++R G
Sbjct: 222 -------------------EAARELFEGMPD-----------RSMISTWNAMISGFSRCG 251
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
V+V+R+ FD M E+D ++W+++I Y Q G EAL++F QM K ++ L +VL
Sbjct: 252 MVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKE-KIRPRKFVLPSVL 310
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A A+LG L G+ IH + ++ ++GTS++DMY KCG++DLA + F +M K V
Sbjct: 311 SACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 370
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SW AMI G MH RA +A+DLF KM + PN ITFV VL+AC+H GLVQ+G N+M
Sbjct: 371 SWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSM 427
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
E+ +EP +EHYGC+VDLLGRAG L EA ++ + + VWG+LLGACR H NV+L
Sbjct: 428 RKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVEL 487
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVEL-R 536
GE K L ELEP N G + LLSNIYA AGRWE+V R LMK R + TPG S+++L R
Sbjct: 488 GERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGR 547
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
G+VH F++GD HPQ + IY+ L+++ +LQ GY D + V+ D+D+EEKE + HSE
Sbjct: 548 GEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSE 607
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLRVC DCH+ +LIS+V +REI+VRD R+H+F++G C
Sbjct: 608 KLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGAC 667
Query: 639 SCGDYW 644
SC D+W
Sbjct: 668 SCKDFW 673
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 137/332 (41%), Gaps = 72/332 (21%)
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYA-----RGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
AH +++ G + + +L+ +YA R + S +VFD + + + WN +I +
Sbjct: 54 AHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVC 113
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
+N +A+ ++ +MV + + N T AVL A + GV+ G +H ++K L
Sbjct: 114 IENNEPFKAILLYYEMVVAHS-RPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGD 172
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFN-QMKEKNVRSWTAMIAGY----------------- 366
+ +S I MY G++ AR+ + + E + W AMI GY
Sbjct: 173 GHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMP 232
Query: 367 ------------------GMHCRAREALD----------------------------LFY 380
GM ARE D +F+
Sbjct: 233 DRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFH 292
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+M K +RP SVLSAC++ G + +G W++T +I+ +VD+ +
Sbjct: 293 QMQKEKIRPRKFVLPSVLSACANLGALDQG-RWIHTYAKRNSIQLDGVLGTSLVDMYAKC 351
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G++ A+++ E M K + W +++G +H
Sbjct: 352 GRIDLAWEVFEKMSNK-EVSSWNAMIGGLAMH 382
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 39/214 (18%)
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG-----QVDLARK 346
T S L AH +LR G L++S I G S++ Y + + +
Sbjct: 45 TTSLHHLKQAHALILRTGH----------LQDSYIAG-SLVKSYANVSTNRYLSFESSLR 93
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F+ +++ NV W MI + +A+ L+Y+M+ A RPN T+ +VL ACS +G+
Sbjct: 94 VFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGV 153
Query: 407 VQEG--------WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
V EG H L GH + + + G+L EA +++ + D
Sbjct: 154 VAEGVQVHAHLVKHGLGGDGHILS---------SAIRMYASFGRLVEARRILDDKGGEVD 204
Query: 459 FVVWGSLLGACRIHKNVDLGEI-AAKKLFELEPN 491
V W ++ I + GE+ AA++LFE P+
Sbjct: 205 AVCWNAM-----IDGYLRFGEVEAARELFEGMPD 233
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/707 (35%), Positives = 389/707 (55%), Gaps = 99/707 (14%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N L + + V+S++S+I L + +++ FS M L P P K C
Sbjct: 67 NDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVC 126
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR------ 137
+ L +GKQ H A + G D FV +L MY +CG + DARK+FD + ++
Sbjct: 127 AELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCS 186
Query: 138 ---------------IR------------NIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+R NIVSW +L+G+ ++ +EA+++F++
Sbjct: 187 ALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKM--- 243
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI 230
+ D V ++SVL + + HG+VIK+G + V + ++
Sbjct: 244 ---------HHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAML 294
Query: 231 DAYARGGHVDVSRKVFD--------------------GMIEK---------------DAV 255
D Y + GHV K+FD G+++K + V
Sbjct: 295 DMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVV 354
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+W SIIA AQNG EAL++F +M + VK N VT+ ++L A ++ L G+ H
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREM-QVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+++ L + V VG+++IDMY KCG++ +++ FN M KN+ W +++ GY MH +A+E
Sbjct: 414 AVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEV 473
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
+ +F +++ ++P++I+F S+LSAC GL EGW + N M E+ I+P +EHY CMV+
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVN 533
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY 495
LLGRAGKL+EAYDLI+ + + D VWG+LL +CR+ NVDL EIAA+KLF LEP N G
Sbjct: 534 LLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGT 593
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
+VL+SNIYA G W +V+ R+ M++ L K PG S ++++ KV+ L DK HPQ ++I
Sbjct: 594 YVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQI 653
Query: 556 YEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------- 599
E ++E++ ++++ G+ ++ + DV+++E+E L HSEKLA
Sbjct: 654 TEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQV 713
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCH VI+ IS REI +RD+ RFH+FKDG+CSCGD+W
Sbjct: 714 IKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 186/452 (41%), Gaps = 93/452 (20%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
QAH + G D ++S+ LI YS +DA + IP + S++S++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPD--PTVYSFSSLIYALTK 93
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+++ +F S + D+ + ++ C+ ++ + H
Sbjct: 94 AKLFSQSIGVFSRMF------------SHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCV 141
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
G D + V +L Y R G + +RKVFD M EKD VT ++++ YA+ G E
Sbjct: 142 ACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEV 201
Query: 274 LDVFDQMVKS----TDVKCNA------------------------------VTLSAVLLA 299
+ + +M KS V N VT+S+VL +
Sbjct: 202 VRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPS 261
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ------------------- 340
+ L +G+ IH VIK L + V ++++DMY K G
Sbjct: 262 VGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVC 321
Query: 341 ------------VDLARKAFNQMKEK----NVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
VD A + F KE+ NV SWT++IAG + + EAL+LF +M
Sbjct: 322 NAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV---EHYG-CMVDLLGRA 440
AGV+PN +T S+L AC + + G H F + + H G ++D+ +
Sbjct: 382 AGVKPNRVTIPSMLPACGNIAALGHG-----RSTHGFAVRVHLLDDVHVGSALIDMYAKC 436
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G++K + + M K + V W SL+ +H
Sbjct: 437 GRIKMSQIVFNMMPTK-NLVCWNSLMNGYSMH 467
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 102/213 (47%), Gaps = 1/213 (0%)
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
T AH ++K G ++ + LI +Y+ + + + + + +++S+I +
Sbjct: 34 TTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTK 93
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
L ++++ VF +M S + + L + A L + GK IH L+
Sbjct: 94 AKLFSQSIGVFSRMF-SHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAF 152
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V S+ MY +CG++ ARK F++M EK+V + +A++ GY E + + +M K+G
Sbjct: 153 VQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSG 212
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
+ PN +++ +LS + +G +E M H
Sbjct: 213 IEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHH 245
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 260/675 (38%), Positives = 378/675 (56%), Gaps = 70/675 (10%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKL---SLTPTRS---TFPCAIKSCSALHDL 89
++V SWNS++A +G + AL FS M + T RS + + +C++L L
Sbjct: 216 DDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKAL 275
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
K+ H A G D FV +ALID Y+KCG + DA +F+ + +++VSW +M+T
Sbjct: 276 PQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVM--EFKDVVSWNAMVT 333
Query: 150 GYVQNDNAREALLLFKEFLLEESECG--------------GASENSDNVF---------V 186
GY Q+ A LFK E G + + + F
Sbjct: 334 GYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEP 393
Query: 187 DSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDS------------EVGVGNTLIDA 232
+SV I S+LSAC+ ++ +++G H + +K+ S ++ V N LID
Sbjct: 394 NSVTIISLLSACA--SLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDM 451
Query: 233 YARGGHVDVSRKVFDGMI--EKDAVTWNSIIAIYAQNGLAAEALDVFDQMV-KSTDVKCN 289
Y++ +R +F+ + E++ VTW +I YAQ G + +AL +F +M+ K V N
Sbjct: 452 YSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPN 511
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI--VGTSIIDMYCKCGQVDLARKA 347
A T+S +L+A AHL LR+GK IH V + ES + V +IDMY KCG VD AR
Sbjct: 512 AYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNV 571
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F+ M ++N SWT+M++GYGMH R +EALD+F KM KAG P+ I+F+ +L ACSH+G+V
Sbjct: 572 FDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMV 631
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+G + + M ++ + +HY C++DLL R+G+L +A+ I+ M ++ +W +LL
Sbjct: 632 DQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLS 691
Query: 468 ACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKT 527
ACR+H NV+L E A KL ++ N G + L+SNIYA A RW+DV R R LMK + K
Sbjct: 692 ACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKR 751
Query: 528 PGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEK 587
PG S V+ + +F VGD+ HP +IY LE L +++ +GYV + +HDVD EEK
Sbjct: 752 PGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEK 811
Query: 588 EMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
L HSEKLA NLRVCGDCH+ ISK+VD EI+VRDS R
Sbjct: 812 NNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEIIVRDSSR 871
Query: 630 FHYFKDGLCSCGDYW 644
FH+FK+G CSCG YW
Sbjct: 872 FHHFKNGSCSCGGYW 886
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 255/556 (45%), Gaps = 72/556 (12%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
+S S + VV++ ++ ++ + V V+ WN ++ G A+
Sbjct: 80 VSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVW-WNLLVRAHIEEGRLDRAIGVSC 138
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
M + P T P A+K+C L SG H GF +VFV +AL+ MYS+ G
Sbjct: 139 RMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSG 198
Query: 123 ELSDARKLFDEIPQR-IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
L DA +FDEI ++ I +++SW S++ +V+ N R AL LF E E +
Sbjct: 199 SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTI------VHEKA 252
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
N D ++I ++L AC+ + T+ H + I+ G ++ V N LID YA+ G +
Sbjct: 253 TNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKD 312
Query: 242 SRKVFDGM-----------------------------------IEKDAVTWNSIIAIYAQ 266
+ VF+ M I D +TW+++IA YAQ
Sbjct: 313 AVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQ 372
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL----- 321
G EALD F QM+ + N+VT+ ++L A A LG L G H +K L
Sbjct: 373 RGYGQEALDTFQQMILYGS-EPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDN 431
Query: 322 -------EESVIVGTSIIDMYCKCGQVDLARKAFNQM--KEKNVRSWTAMIAGYGMHCRA 372
E ++V ++IDMY KC AR FN + +E+NV +WT MI GY + +
Sbjct: 432 DFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDS 491
Query: 373 REALDLFYKMIKA--GVRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVE 428
+AL LF +MI V PN T +L AC+H ++ G H T HE+ E V
Sbjct: 492 NDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEY--ESSVY 549
Query: 429 HYG-CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH----KNVDLGEIAAK 483
C++D+ + G + A ++ + M K + V W S++ +H + +D+ + K
Sbjct: 550 FVANCLIDMYSKCGDVDTARNVFDSMP-KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQK 608
Query: 484 KLFELEPNNCGYHVLL 499
F P++ + VLL
Sbjct: 609 AGF--VPDDISFLVLL 622
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 135/276 (48%), Gaps = 38/276 (13%)
Query: 27 TLFNKYVDKN-NVFSWNSVIADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPCAIKSC 83
T+FN + NV +W +I A+ GDS +AL+ FS M + ++ P T C + +C
Sbjct: 463 TIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMAC 522
Query: 84 SALHDLHSGKQAHQQAFIFGFHRD----VFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+ L L GKQ H A++ H FV++ LIDMYSKCG++ AR +FD +P+ R
Sbjct: 523 AHLSSLRMGKQIH--AYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPK--R 578
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N VSWTSM++GY + +EAL +F + D ++ +L ACS
Sbjct: 579 NEVSWTSMMSGYGMHGRGKEALDIFDKM------------QKAGFVPDDISFLVLLYACS 626
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNT------LIDAYARGGHVDVSRKVFDGM-IEK 252
+ V +G F I R S+ GV + +ID AR G +D + K M +E
Sbjct: 627 HSGM--VDQGLDYFDIMR---SDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEP 681
Query: 253 DAVTWNSIIA---IYAQNGLAAEALDVFDQMVKSTD 285
A W ++++ +++ LA AL+ M D
Sbjct: 682 SAAIWVALLSACRVHSNVELAEYALNKLVSMKAEND 717
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 16 VDKHSTNTNLTTLFNKY--VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTR 73
+D +S ++ T N + + K N SW S+++ G EAL F M+K P
Sbjct: 556 IDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDD 615
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVF--VSSA-----LIDMYSKCGELSD 126
+F + +CS HSG Q F R + ++SA +ID+ ++ G L
Sbjct: 616 ISFLVLLYACS-----HSG-MVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDK 669
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
A K E+P + W ++L+ + N A + + ++E G+ N++
Sbjct: 670 AWKTIQEMPMEPSAAI-WVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIY 727
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 255/655 (38%), Positives = 377/655 (57%), Gaps = 50/655 (7%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S ++++S ++ +F++ KN++ SWN ++A + G +A R F S
Sbjct: 63 SWNAMLSGYAQNGYVKEAKEIFDEMPCKNSI-SWNGMLAAYVQNGRIEDARRLFESKADW 121
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
L ++ C + + L + + RD + +I Y++ GEL +A
Sbjct: 122 ELI----SWNCMMGGYVKRNRLVDARGIFDRMP----ERDEVSWNTMISGYAQNGELLEA 173
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
++LF+E P +R++ +WT+M++GYVQN EA +F G +NS V
Sbjct: 174 QRLFEESP--VRDVFTWTAMVSGYVQNGMLDEARRVFD---------GMPEKNS----VS 218
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
AI + C R+ + E + V NT+I YA+ G + +R FD
Sbjct: 219 WNAIIAGYVQCKRM--DQARELFEAMPCQ-----NVSSWNTMITGYAQNGDIAQARNFFD 271
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
M ++D+++W +IIA YAQ+G EAL +F +M + + + N T ++ L A + L
Sbjct: 272 RMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGE-RLNRSTFTSTLSTCAEIAALE 330
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
LGK +H +V+K LE VG +++ MYCKCG +D A F ++EK V SW MIAGY
Sbjct: 331 LGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYA 390
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
H +EAL LF M K G+ P+ +T V VLSACSH GLV +G + +M ++ I
Sbjct: 391 RHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANS 450
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
+HY CM+DLLGRAG+L +A +L++ M + D WG+LLGA RIH N +LGE AAK +FE
Sbjct: 451 KHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFE 510
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
+EP+N G +VLLSN+YA +GRW DV R R M++R + K PG+S VE++ K+H F VGD
Sbjct: 511 MEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDS 570
Query: 548 EHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------- 599
HP+ ++IY +LEEL++K+++ GYV+ V+HDV++EEK L+ HSEKLA
Sbjct: 571 VHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAI 630
Query: 600 ----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH ++ ISK+V R I++RDS RFH+F G CSCGDYW
Sbjct: 631 PAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 177/381 (46%), Gaps = 66/381 (17%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L AR LFD++P+R ++VSW +ML+GY QN +EA +F E +
Sbjct: 46 LRAARLLFDQMPER--DVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK------------- 90
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+S++ +L+A NG E A + D E+ N ++ Y + + +R
Sbjct: 91 ---NSISWNGMLAA---YVQNGRIEDARRLFESKA-DWELISWNCMMGGYVKRNRLVDAR 143
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+FD M E+D V+WN++I+ YAQNG EA +F++ + V+ + T +A++
Sbjct: 144 GIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE----SPVR-DVFTWTAMVSGYVQN 198
Query: 304 GVLRLGKCIHD------------------QVIKMDLE---------ESVIVGTSIIDMYC 336
G+L + + D Q +MD ++V ++I Y
Sbjct: 199 GMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYA 258
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
+ G + AR F++M +++ SW A+IAGY EAL LF +M + G R N TF S
Sbjct: 259 QNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTS 318
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD-----LLGRAGKLKEAYDLIE 451
LS C+ ++ L H ++ G+E GC V + + G + +AY + E
Sbjct: 319 TLSTCAEIAALE-----LGKQVHGRVVKAGLES-GCYVGNALLVMYCKCGNIDDAYIVFE 372
Query: 452 GMKVKADFVVWGSLLGACRIH 472
G++ K + V W +++ H
Sbjct: 373 GIEEK-EVVSWNTMIAGYARH 392
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 151/314 (48%), Gaps = 30/314 (9%)
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC-NAVTLSAVLLA 299
+R +FD M E+D V+WN++++ YAQNG EA ++FD+M C N+++ + +L A
Sbjct: 48 AARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM------PCKNSISWNGMLAA 101
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
G + + + + K D E +I ++ Y K ++ AR F++M E++ SW
Sbjct: 102 YVQNGRIEDARRLFES--KADWE--LISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSW 157
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
MI+GY + EA LF ++ VR + T+ +++S G++ E + M
Sbjct: 158 NTMISGYAQNGELLEAQRLFE---ESPVR-DVFTWTAMVSGYVQNGMLDEARRVFDGMPE 213
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
+ ++ + ++ + ++ +A +L E M + + W +++ +N D+ +
Sbjct: 214 KNSVS-----WNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITG--YAQNGDIAQ 265
Query: 480 IAAKKLFELEP--NNCGYHVLLSNIYANAGRWEDVERTRSLMK--NRRLAKTPGFSLVEL 535
A+ F+ P ++ + +++ YA +G E+ MK RL ++ S +
Sbjct: 266 --ARNFFDRMPQRDSISWAAIIAG-YAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLST 322
Query: 536 RGKVHAFLVGDKEH 549
++ A +G + H
Sbjct: 323 CAEIAALELGKQVH 336
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 263/671 (39%), Positives = 373/671 (55%), Gaps = 64/671 (9%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKL---SLTPTRS---TFPCAIKSCSALHDL 89
++V SWNS+++ + ++ AL FS M + T RS + + +C +L +
Sbjct: 77 DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAV 136
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
K+ H A G DVFV +ALID Y+KCG + +A K+F+ + +++VSW +M+
Sbjct: 137 PQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMM--EFKDVVSWNAMVA 194
Query: 150 GYVQNDNAREALLLFKEFLLEESECG--------------GASENSDNVF---------V 186
GY Q+ N + A LFK E G S + NVF
Sbjct: 195 GYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLP 254
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKR----------GFDSEVGVGNTLIDAYARG 236
+ V I SVLSAC+ + H + +K G D ++ V N LID Y++
Sbjct: 255 NCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC 314
Query: 237 GHVDVSRKVFDGMI--EKDAVTWNSIIAIYAQNGLAAEALDVFDQMV-KSTDVKCNAVTL 293
+R +FD + E++ VTW +I +AQ G + +AL +F +M+ + V NA T+
Sbjct: 315 RSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTI 374
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEES--VIVGTSIIDMYCKCGQVDLARKAFNQM 351
S +L+A AHL +R+GK IH V++ +S V +I+MY KCG VD AR F+ M
Sbjct: 375 SCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSM 434
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
+K+ SWT+M+ GYGMH R EALD+F KM KAG P+ ITF+ VL ACSH G+V +G
Sbjct: 435 SQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGL 494
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
+ ++M ++ + P EHY +DLL R G+L +A+ ++ M ++ VVW +LL ACR+
Sbjct: 495 SYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRV 554
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFS 531
H NV+L E A KL E+ N G + L+SNIYA AGRW+DV R R LMK + K PG S
Sbjct: 555 HSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 614
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTL 591
V+ + +F VGD+ HP +IY LE L +++ +GYV + +HDVD+EEK L
Sbjct: 615 WVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLL 674
Query: 592 RIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF 633
HSEKLA NLRVCGDCH+ ISK+VD EIVVRD RFH+F
Sbjct: 675 VEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHF 734
Query: 634 KDGLCSCGDYW 644
K+G CSCG YW
Sbjct: 735 KNGSCSCGGYW 745
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 219/450 (48%), Gaps = 61/450 (13%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
T P +K+C L G H GF +VF+ +AL+ MYS+CG L +A +FDEI
Sbjct: 12 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI 71
Query: 135 PQR-IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
QR I +++SW S+++ +V++ NA AL LF + L E N D ++I +
Sbjct: 72 TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLI------VHEKPTNERSDIISIVN 125
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM---- 249
+L AC + T+ HG I+ G +V VGN LIDAYA+ G ++ + KVF+ M
Sbjct: 126 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 185
Query: 250 -------------------------------IEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
I D VTW ++IA Y+Q G + EAL+VF
Sbjct: 186 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 245
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL----------EESVIVG 328
QM+ S + N VT+ +VL A A LG G IH +K L +E ++V
Sbjct: 246 QMIFSGSLP-NCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 304
Query: 329 TSIIDMYCKCGQVDLARKAFN--QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA- 385
++IDMY KC AR F+ ++E+NV +WT MI G+ + + +AL LF +MI
Sbjct: 305 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 364
Query: 386 -GVRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
GV PN T +L AC+H ++ G H H+++ C++++ + G
Sbjct: 365 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYD-SSAYFVANCLINMYSKCGD 423
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ A + + M K+ + W S++ +H
Sbjct: 424 VDTARHVFDSMSQKSA-ISWTSMMTGYGMH 452
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 158/336 (47%), Gaps = 53/336 (15%)
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+D + VL AC + HG + GF+S V + N L+ Y+R G ++ + +
Sbjct: 8 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 67
Query: 246 FDGMIEK---DAVTWNSIIAIYAQNGLAAEALDVFDQMV-----KSTDVKCNAVTLSAVL 297
FD + ++ D ++WNSI++ + ++ A ALD+F +M K T+ + + +++ +L
Sbjct: 68 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 127
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A L + K +H I+ V VG ++ID Y KCG ++ A K FN M+ K+V
Sbjct: 128 PACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 187
Query: 358 SWTAMIAGY---------------------------------GMHCR--AREALDLFYKM 382
SW AM+AGY G R + EAL++F +M
Sbjct: 188 SWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQM 247
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGW--------HWLNTMGHEFNIE-PGVEHYGCM 433
I +G PN +T +SVLSAC+ G +G + L T+ ++F E + Y +
Sbjct: 248 IFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNAL 307
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKA-DFVVWGSLLGA 468
+D+ + K A + + + ++ + V W ++G
Sbjct: 308 IDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG 343
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 31/266 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPCAIKSCSALHDLH 90
+++ NV +W +I A+ GDS +AL+ F M + P T C + +C+ L +
Sbjct: 329 LEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIR 388
Query: 91 SGKQAHQQAFIFGFHR----DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
GKQ H A++ H+ FV++ LI+MYSKCG++ AR +FD + Q ++ +SWTS
Sbjct: 389 IGKQIH--AYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQ--KSAISWTS 444
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+TGY + EAL +F + D + VL ACS + V
Sbjct: 445 MMTGYGMHGRGSEALDIFDKM------------RKAGFVPDDITFLVVLYACSHCGM--V 490
Query: 207 TEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
+G F G ID AR G +D + K M +E AV W ++++
Sbjct: 491 DQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLS 550
Query: 263 ---IYAQNGLAAEALDVFDQMVKSTD 285
+++ LA AL+ +M D
Sbjct: 551 ACRVHSNVELAEHALNKLVEMNAEND 576
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 62/159 (38%), Gaps = 12/159 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + SW S++ G EAL F MRK P TF + +CS H G
Sbjct: 434 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS-----HCG 488
Query: 93 KQAHQQAFIFGFHRDVFVS------SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
++ D ++ + ID+ ++ G L A K ++P +V W +
Sbjct: 489 MVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVV-WVA 547
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
+L+ + N A + + +E G+ N++
Sbjct: 548 LLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIY 586
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 247/671 (36%), Positives = 372/671 (55%), Gaps = 97/671 (14%)
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM 117
+R FS M + P P IK+C+AL L +GKQ H A + G D V S+L+ M
Sbjct: 59 IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118
Query: 118 YSKCGELSDARKLFDEIPQ-----------------RIR----------------NIVSW 144
Y + L DAR +FD++PQ R++ N+VSW
Sbjct: 119 YVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSW 178
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
M++G+ ++ + +A+L+F+ LE + D +++SVL A + +
Sbjct: 179 NGMISGFNRSGSYLDAVLMFQNMHLE------------GLKPDGTSVSSVLPAVGDLDMP 226
Query: 205 GVTEGAHGFVIKRGF-------------------------------DSEVGVGNTLIDAY 233
+ H +VIK+G + +VG N L+
Sbjct: 227 LMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGL 286
Query: 234 ARGGHVDVSRKVFDGM--IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
+R G VD + +VF ++ + V+W S+IA +QNG EAL++F +M + VK N+V
Sbjct: 287 SRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREM-QIEGVKPNSV 345
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
T+ +L A ++ L GK H ++ + V VG+++IDMY KCG++ +R F+ M
Sbjct: 346 TIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMM 405
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
+N+ SW +++AGY MH + EA+++F M + G +P++++F VLSAC+ GL +EGW
Sbjct: 406 PNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGW 465
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
+ ++M +E +EHY CMV LLGR+G+L+EAY +I+ M + D VWG+LL +CR+
Sbjct: 466 FYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRV 525
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFS 531
H VDLGEIAAK++FELEP N G ++LLSNIYA+ W +V+ R +M++R L K PG+S
Sbjct: 526 HNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYS 585
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTL 591
+E++ KVH L GD HPQ +I E L +L V++++ GYV V+ DV++++KE L
Sbjct: 586 WIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQIL 645
Query: 592 RIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF 633
HSEKLA NLR+C DCH VI+ IS REI VRD+ RFH F
Sbjct: 646 CGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQF 705
Query: 634 KDGLCSCGDYW 644
K G+CSCGDYW
Sbjct: 706 KGGVCSCGDYW 716
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 168/375 (44%), Gaps = 50/375 (13%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N+ SWN +I+ R G ++A+ F +M L P ++ + + L G Q H
Sbjct: 174 NLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIH 233
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKC-------------------------------GELS 125
G D FV SALIDMY KC G +
Sbjct: 234 CYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVD 293
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
+A ++F + N+VSWTSM+ QN EAL LF+E +E G N
Sbjct: 294 NALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIE-----GVKPN----- 343
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
SV I +L AC + + AH F ++ G ++V VG+ LID YA+ G + SR
Sbjct: 344 --SVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLC 401
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD M ++ V+WNS++A YA +G EA+++F+ M + K + V+ + VL A G+
Sbjct: 402 FDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQ-KPDHVSFTCVLSACTQGGL 460
Query: 306 LRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMI 363
G D + + +E + + ++ + + G+++ A QM E + W A++
Sbjct: 461 TEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALL 520
Query: 364 AGYGMHCRAREALDL 378
+ CR +DL
Sbjct: 521 SS----CRVHNRVDL 531
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 130/261 (49%), Gaps = 23/261 (8%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKN-NVFSWNSVIADLARGGDSVEALRAFSSMRK 66
+ +++V+ + ++ N +F ++ + NV SW S+IA ++ G +EAL F M+
Sbjct: 278 ACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQI 337
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
+ P T PC + +C + L GK AH + G DV+V SALIDMY+KCG +
Sbjct: 338 EGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLA 397
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
+R FD +P RN+VSW S++ GY + EA+ +F+ L++ CG
Sbjct: 398 SRLCFDMMPN--RNLVSWNSLMAGYAMHGKTFEAINIFE--LMQ--RCGQKP-------- 443
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFV----IKRGFDSEVGVGNTLIDAYARGGHVDVS 242
D V+ VLSAC T G+TE + G ++ + + ++ R G ++ +
Sbjct: 444 DHVSFTCVLSAC---TQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEA 500
Query: 243 RKVFDGM-IEKDAVTWNSIIA 262
+ M E D+ W ++++
Sbjct: 501 YAMIKQMPFEPDSCVWGALLS 521
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/613 (40%), Positives = 364/613 (59%), Gaps = 45/613 (7%)
Query: 62 SSMRKLSLTPTRSTFPCAIKS-----CSALH-DLHSGKQAHQQAFIFGFHRDVFVSSA-- 113
S + S T + ST P + KS C AL S K +Q F V +++
Sbjct: 16 SPRKHFSFTISTSTCPESPKSYILKKCIALLLSCASSKFKFRQIHAFSIRHGVPLTNPDM 75
Query: 114 ----LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLL 169
+ + S C +S A ++F +I NI +W +M+ GY +++N AL L+++
Sbjct: 76 GKYLIFTLLSFCSPMSYAHQIFSQIQNP--NIFTWNTMIRGYAESENPMPALELYRQM-- 131
Query: 170 EESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTL 229
+ + D+ +L A +++ E H I+ GF+S V V NTL
Sbjct: 132 ----------HVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTL 181
Query: 230 IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCN 289
+ YA GH + + K+F+ M E++ VTWNS+I YA NG EAL +F +M V+ +
Sbjct: 182 VHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREM-GLRGVEPD 240
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
T+ ++L A A LG L LG+ H ++K+ L+ ++ G +++D+Y KCG + A K F+
Sbjct: 241 GFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFD 300
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
+M+EK+V SWT++I G ++ +EAL+LF ++ + G+ P+ ITFV VL ACSH G+V E
Sbjct: 301 EMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDE 360
Query: 410 GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G+ + M E+ I P +EHYGCMVDLLGRAG +K+A++ I+ M ++ + VVW +LLGAC
Sbjct: 361 GFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGAC 420
Query: 470 RIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPG 529
IH ++ LGE+A +L +LEP + G +VLLSN+YA+ RW DV + R M + KTPG
Sbjct: 421 TIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPG 480
Query: 530 FSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEM 589
SLVELR ++H F++GD+ HPQ E+IY L E+ L+ GYV +++V+ D+++EEKE
Sbjct: 481 HSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEEEEKET 540
Query: 590 TLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFH 631
L HSEK+A NLRVC DCH I+LISKV DREIVVRD RFH
Sbjct: 541 ALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVRDRSRFH 600
Query: 632 YFKDGLCSCGDYW 644
+FKDG CSC DYW
Sbjct: 601 HFKDGHCSCKDYW 613
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 167/342 (48%), Gaps = 23/342 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ N+F+WN++I A + + AL + M + P T+P +K+ + L D+ G
Sbjct: 100 IQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREG 159
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ H A GF VFV + L+ MY+ CG A KLF+ + + RN+V+W S++ GY
Sbjct: 160 EKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAE--RNLVTWNSVINGYA 217
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N EAL LF+E L E D + S+LSAC+ + + AH
Sbjct: 218 LNGRPNEALTLFREMGLRGVE------------PDGFTMVSLLSACAELGALALGRRAHV 265
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+++K G D + GN L+D YA+ G + + KVFD M EK V+W S+I A NG E
Sbjct: 266 YMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKE 325
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS-- 330
AL++F ++ + + + +T VL A +H G++ G D +M E ++
Sbjct: 326 ALELFKELERK-GLMPSEITFVGVLYACSHCGMVDEG---FDYFKRMKEEYGIVPKIEHY 381
Query: 331 --IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + G V A + M + N W ++ +H
Sbjct: 382 GCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIH 423
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/630 (38%), Positives = 365/630 (57%), Gaps = 67/630 (10%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRK--LSLTPTRSTFPCAIKSCSALHDLHSG 92
+ +N +I L +AL F+SMR + P T+P A+KSCSA DL G
Sbjct: 83 RTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLG 142
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H R+V+V+ + I MYS+CG DA ++FD +P R ++VSW +M+ G+
Sbjct: 143 LQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHR--DVVSWNAMIAGFA 200
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ A+ +FK+F++ + D+ +A +L A
Sbjct: 201 RVGLFDRAIEVFKQFVVLQGS-----------MPDAGTMAGILPA--------------- 234
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+GN A+ + R+VFD M K+ ++WN+++A+YA N +
Sbjct: 235 ------------MGN------AKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVK 276
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+++F M K +V+ +++TL+ VL L +GK IH+ + + ++ ++++ +++
Sbjct: 277 AVELFMLMEKD-EVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALM 335
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY CG + AR+ F+ M ++V SWT++I+ YG H REA+DLF KM+ G+ P+ I
Sbjct: 336 DMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSI 395
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
FV+VL+ACSHAGL+ +G H+ ++M ++I P EHY CMVDLLGRAG + EAYD I
Sbjct: 396 AFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITT 455
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M ++ + VWG+LL ACRIH N+D+G +AA LF L P GY+VLLSN+YA AGRW DV
Sbjct: 456 MLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADV 515
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
RS+M N+ + K PG S+VEL +VH F +GD+ HPQ E IY L+EL K++ +GY
Sbjct: 516 TSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYN 575
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
++ + +HDV++E+KE L +HSEKLA NLR C DCH +LI
Sbjct: 576 PEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLI 635
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S + REIV++D+ R H+ G+CSCGDYW
Sbjct: 636 SIITCREIVLKDTNRIHHIVQGVCSCGDYW 665
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/628 (38%), Positives = 363/628 (57%), Gaps = 34/628 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
NV SW S++A + G + +AL+ FS M+ + P TF + +A + G Q H
Sbjct: 157 NVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVH 216
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G +FV +++++MYSK +SDA+ +FD + R N VSW SM+ G+V N
Sbjct: 217 TMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENR--NAVSWNSMIAGFVTNGL 274
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EA LF LE V + A+V+ C+ + + H VIK
Sbjct: 275 DLEAFELFYRMRLE------------GVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIK 322
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWNSIIAIYAQNGLAAEALD 275
G D ++ + L+ AY++ +D + K+F M ++ V+W +II+ Y QNG A++
Sbjct: 323 NGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMN 382
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIA-HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+F QM + V+ N T S+VL A A + GK H IK ++ V ++++ M
Sbjct: 383 LFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTM 442
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y K G ++ A + F + ++++ SW +MI+GY H +++L +F +M + + ITF
Sbjct: 443 YAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITF 502
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
+ V+SAC+HAGLV EG + + M +++I P +EHY CMVDL RAG L++A DLI M
Sbjct: 503 IGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMP 562
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
A +W +LL ACR+H NV LGE+AA+KL L+P + +VLLSNIYA AG W++ +
Sbjct: 563 FPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAK 622
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTD 574
R LM +++ K G+S +E++ K +F+ GD HPQ ++IY LEEL+++L++ GY D
Sbjct: 623 VRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPD 682
Query: 575 MTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISK 616
V+HDV++E KE+ L HSE+LA NLRVCGDCHTVI+LISK
Sbjct: 683 TKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISK 742
Query: 617 VVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ R+IVVRDS RFH+FK G CSCGDYW
Sbjct: 743 IEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 154/463 (33%), Positives = 243/463 (52%), Gaps = 40/463 (8%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTR-STFPCAIKSCSALHDLHSGKQAHQQAF 100
N ++ + +R + EAL F +R+ S +PT S+ C +K C L D GKQ H Q
Sbjct: 61 NHLLFEFSRNDQNKEALNLFLGLRR-SGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCI 119
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
GF DV V ++L+DMY K + D ++FDE+ R++N+VSWTS+L GY QN +A
Sbjct: 120 KCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM--RVKNVVSWTSLLAGYRQNGLNEQA 177
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA---HGFVIKR 217
L LF + LE G N A+VL + +G E H VIK
Sbjct: 178 LKLFSQMQLE-----GIKPN-------PFTFAAVLGG---LAADGAVEKGVQVHTMVIKS 222
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
G DS + VGN++++ Y++ V ++ VFD M ++AV+WNS+IA + NGL EA ++F
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELF 282
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
+M + VK + V+ A++ + K +H QVIK + + + T+++ Y K
Sbjct: 283 YRM-RLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341
Query: 338 CGQVDLARKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDLFYKMIK-AGVRPNYITFV 395
C ++D A K F M +NV SWTA+I+GY + R A++LF +M + GV PN TF
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFS 401
Query: 396 SVLSAC-SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC----MVDLLGRAGKLKEAYDLI 450
SVL+AC + V++G + H +I+ G + C +V + + G ++ A ++
Sbjct: 402 SVLNACAAPTASVEQGKQF-----HSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVF 456
Query: 451 EGMKVKADFVVWGSLLGACRIH----KNVDLGEIAAKKLFELE 489
+ +V D V W S++ H K++ + E K EL+
Sbjct: 457 K-RQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELD 498
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 195/364 (53%), Gaps = 19/364 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S+V+ K ++ +F+ ++N V SWNS+IA G +EA F MR +
Sbjct: 232 NSMVNMYSKSLMVSDAKAVFDSMENRNAV-SWNSMIAGFVTNGLDLEAFELFYRMRLEGV 290
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
T++ F IK C+ + ++ KQ H Q G D+ + +AL+ YSKC E+ DA K
Sbjct: 291 KLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFK 350
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
LF + ++N+VSWT++++GYVQN A+ LF + EE G N
Sbjct: 351 LFCMM-HGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREE----GVEPN-------EF 398
Query: 190 AIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
+SVL+AC+ T + V +G H IK GF + + V + L+ YA+ G+++ + +VF
Sbjct: 399 TFSSVLNACAAPTAS-VEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFK 457
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+++D V+WNS+I+ YAQ+G ++L +F++M +S +++ + +T V+ A H G++
Sbjct: 458 RQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEM-RSKNLELDGITFIGVISACTHAGLVN 516
Query: 308 LGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAG 365
G+ D ++K + ++ + ++D+Y + G ++ A N+M W ++A
Sbjct: 517 EGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAA 576
Query: 366 YGMH 369
+H
Sbjct: 577 CRVH 580
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 146/277 (52%), Gaps = 15/277 (5%)
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
+++LFDE PQ+ + +L + +ND +EAL LF S G+S
Sbjct: 45 SQQLFDETPQQ--GLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSS-------- 94
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
++ VL C + V + H IK GF +V VG +L+D Y + V+ +VF
Sbjct: 95 ----LSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVF 150
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D M K+ V+W S++A Y QNGL +AL +F QM + +K N T +AVL +A G +
Sbjct: 151 DEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQM-QLEGIKPNPFTFAAVLGGLAADGAV 209
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
G +H VIK L+ ++ VG S+++MY K V A+ F+ M+ +N SW +MIAG+
Sbjct: 210 EKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGF 269
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
+ EA +LFY+M GV+ F +V+ C++
Sbjct: 270 VTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCAN 306
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 123/227 (54%), Gaps = 3/227 (1%)
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
S+++FD ++ N ++ +++N EAL++F + +S + +LS VL
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGS-PTDGSSLSCVLKVCG 103
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
L +GK +H Q IK E V VGTS++DMY K V+ + F++M+ KNV SWT+
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
++AGY + +AL LF +M G++PN TF +VL + G V++G ++TM +
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQ-VHTMVIKS 222
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
++ + MV++ ++ + +A + + M+ + + V W S++
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENR-NAVSWNSMIAG 268
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/619 (39%), Positives = 363/619 (58%), Gaps = 35/619 (5%)
Query: 45 IADLARGGDSVEALR-AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFG 103
++ L R SV A R A SS+ + AI +C L G+Q H
Sbjct: 12 VSSLVRWDMSVVAARHAASSLAVPGADARFHDYDAAITACVERQALGEGRQVHAHMVKAR 71
Query: 104 FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
+ V++++ LI +Y +CG L DAR + D +P+R N+VSWT+M++GY Q+ EAL L
Sbjct: 72 YRPPVYLATRLIILYVRCGALDDARNVLDGMPER--NVVSWTAMISGYSQSGRHAEALEL 129
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEV 223
F L + C + +A+VL++C E H V+K F+S +
Sbjct: 130 FIRML--RAGCKA----------NEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHM 177
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
VG++L+D Y + G++ +RKVFD + E+D V+ +II+ YAQ GL EALD+F Q+ S
Sbjct: 178 FVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLY-S 236
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL 343
+ ++CN VT + +L +++ L L GK +H +++ +L +++ S+IDMY KCG++
Sbjct: 237 SGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLY 296
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
+R+ F+ M +++ SW AM+ GYG H +E + LF M + V+P+ +T ++VLS CSH
Sbjct: 297 SRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTLLAVLSGCSH 355
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWG 463
GLV EG + + E N + HYGC++DLLGR+G+L++A DLIE M + +WG
Sbjct: 356 GGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWG 415
Query: 464 SLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRR 523
SLLGACR+H NV +GE+ A+KL ++EP N G +V+LSNIYA AG W+DV R R LM
Sbjct: 416 SLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENT 475
Query: 524 LAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVD 583
+ K P S + L +H F ++ HP+ + I ++E+ V ++ G+V D++ V+HDVD
Sbjct: 476 VTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVPDLSCVLHDVD 535
Query: 584 QEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVR 625
E+KE L HSEKLA NLR+C DCH + +SKV REI +R
Sbjct: 536 DEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVSKVYGREISLR 595
Query: 626 DSKRFHYFKDGLCSCGDYW 644
D RFH KDG C+CGDYW
Sbjct: 596 DKNRFHLLKDGACTCGDYW 614
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 187/380 (49%), Gaps = 36/380 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW ++I+ ++ G EAL F M + T + SC +
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV 161
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H F +FV S+L+DMY K G + +ARK+FD +P+ R+ VS T++++GY
Sbjct: 162 EQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPE--RDTVSCTAIISGYA 219
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q EAL LF++ +C + V ++L++ S + + HG
Sbjct: 220 QLGLDDEALDLFRQLYSSGMQC------------NYVTFTTLLTSLSGLASLNYGKQVHG 267
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++++ + + N+LID Y++ G + SR+VFD M ++ A++WN+++ Y ++G+ E
Sbjct: 268 LILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQE 327
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS-- 330
+ +F M + +VK ++VTL AVL +H G++ G I D ++K E++ ++
Sbjct: 328 VVQLFRTMTE--EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVK---EQNAVIHIGHY 382
Query: 331 --IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCR-------AREALDLFY 380
+ID+ + GQ+ A M E W +++ +H A++ LD+
Sbjct: 383 GCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDM-- 440
Query: 381 KMIKAGVRPNYITFVSVLSA 400
+ G NY+ ++ +A
Sbjct: 441 ---EPGNAGNYVILSNIYAA 457
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/595 (39%), Positives = 358/595 (60%), Gaps = 34/595 (5%)
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
SL P R+ + + C+ L L G+ H F D+ + + +++MY+KCG L +A
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
+ LFD++P +++VSWT +++GY Q+ A EAL LF + L G N
Sbjct: 160 QDLFDKMP--TKDMVSWTVLISGYSQSGQASEALALFPKMLHL-----GFQPNE------ 206
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
++S+L A + H F +K G+D V VG++L+D YAR H+ ++ +F+
Sbjct: 207 -FTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFN 265
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ K+ V+WN++IA +A+ G + +F QM++ + T S+V A A G L
Sbjct: 266 SLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQ-GFEPTHFTYSSVFTACASSGSLE 324
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
GK +H VIK + +G ++IDMY K G + A+K F ++ ++++ SW ++I+GY
Sbjct: 325 QGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYA 384
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
H EAL LF +M+KA V+PN ITF+SVL+ACSH+GL+ EG ++ M + IE V
Sbjct: 385 QHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQV 443
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
H+ +VDLLGRAG+L EA IE M +K VWG+LLG+CR+HKN+DLG AA+++FE
Sbjct: 444 AHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFE 503
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
L+P++ G HVLLSNIYA+AGR D + R +MK + K P S VE+ +VH F+ D
Sbjct: 504 LDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDD 563
Query: 548 EHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------- 599
HP E+I E+++ K++E+GYV D + V+ ++Q+++E+ L+ HSEKLA
Sbjct: 564 SHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKT 623
Query: 600 ----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
N+R+CGDCH+ + S+V+ REI+VRD+ RFH+F G+CSC DYW
Sbjct: 624 PPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 184/352 (52%), Gaps = 21/352 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K K+ V SW +I+ ++ G + EAL F M L P T +K+
Sbjct: 162 LFDKMPTKDMV-SWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
H G+Q H + +G+ +V V S+L+DMY++ + +A+ +F+ + +N+VSW ++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA--KNVVSWNAL 278
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + + LF + L + E +SV +AC+
Sbjct: 279 IAGHARKGEGEHVMRLFLQMLRQGFE------------PTHFTYSSVFTACASSGSLEQG 326
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H VIK G +GNTLID YA+ G + ++KVF ++++D V+WNSII+ YAQ+
Sbjct: 327 KWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQH 386
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL AEAL +F+QM+K+ V+ N +T +VL A +H G+L G+ + + K +E V
Sbjct: 387 GLGAEALQLFEQMLKA-KVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAH 445
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMHCRAREALDL 378
+++D+ + G+++ A K +M K + W A++ CR + +DL
Sbjct: 446 HVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGS----CRMHKNMDL 493
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/587 (40%), Positives = 354/587 (60%), Gaps = 39/587 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+ C + G++ H + V++S+ LI +Y+KC L AR +FDE+ R R
Sbjct: 17 LNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEM--RER 74
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+VSWT+M++GY Q A EAL LF + L ++E + A+VLS+C+
Sbjct: 75 NVVSWTAMISGYSQRGFASEALHLFVQMLRSDTE------------PNEFTFATVLSSCT 122
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ + H + KR +++ + VG++L+D YA+ G + +R VF+ + E+D V+ +
Sbjct: 123 GFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTA 182
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
II+ YAQ GL EAL++F ++ + + N VT +++L A++ L L GK +H V++
Sbjct: 183 IISGYAQLGLDEEALELFCRL-QREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRC 241
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
+L V++ S+IDMY KCG ++ ARK FN M + V SW AM+ GY H + E + LF
Sbjct: 242 ELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLF 301
Query: 380 YKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWLNTM---GHEFNIEPGVEHYGCMVD 435
M + V+P+ +TF++VLS CSH GL +G + M G E IE G+EHYGC++D
Sbjct: 302 KLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDE--IEAGIEHYGCVID 359
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY 495
LLGRAG+++EA++LI+ M + +WGSLLGACR+H N ++GE +L E+EP N G
Sbjct: 360 LLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGN 419
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
+V+LSN+YA+AGRWEDV R LM + + K PG S +EL +H F D+ HP+ E++
Sbjct: 420 YVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEV 479
Query: 556 YEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------- 599
+ + EL VK +E GYV D + V++DVD+E+KE L HSEKLA
Sbjct: 480 FLKVRELLVKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRV 539
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH + +SKV R++ +RD RFH+ G+CSCGDYW
Sbjct: 540 IKNLRICVDCHNFAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 174/338 (51%), Gaps = 17/338 (5%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ NV SW ++I+ ++ G + EAL F M + P TF + SC+ G+Q
Sbjct: 73 ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H F + +FV S+L+DMY+K G + +AR +F+ +P+ R++VS T++++GY Q
Sbjct: 133 IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPE--RDVVSCTAIISGYAQL 190
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
EAL LF E G S N V AS+L+A S + + H V
Sbjct: 191 GLDEEALELFCRLQRE-----GMSSN-------YVTYASLLTALSGLAALDHGKQVHSHV 238
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
++ V + N+LID Y++ G+++ +RK+F+ M + ++WN+++ Y+++G E +
Sbjct: 239 LRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVV 298
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM--DLEESVIVGTSII 332
+F M + VK ++VT AVL +H G+ G + D+++ ++E + +I
Sbjct: 299 KLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVI 358
Query: 333 DMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
D+ + G+V+ A + +M E W +++ +H
Sbjct: 359 DLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVH 396
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/634 (39%), Positives = 368/634 (58%), Gaps = 40/634 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V ++ +WNS+IA R G S EA+ + M + P TF K+ S L +H G
Sbjct: 136 VPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEG 195
Query: 93 KQAHQQAFIFGFH-RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
++AH Q+ + G +VFV SAL+DMY+K G++ DAR + D++ + ++V +T+++ GY
Sbjct: 196 QRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGK--DVVLFTALIVGY 253
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG-- 209
+ E+L +F+ + + ++SVL C + +T G
Sbjct: 254 SHHGEDGESLQVFRNM------------TKKGIEANEYTLSSVLVCCG--NLEDLTSGRL 299
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG ++K G +S V +L+ Y R G VD S KVF I + VTW S+I QNG
Sbjct: 300 IHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGR 359
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
AL F QM++S+ + N+ TLS+VL A + L +L GK IH V+K L+ VG
Sbjct: 360 EEIALLKFRQMLRSS-ITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGA 418
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
++ID Y KCG ++AR FN + E +V S +MI Y + EAL LF M G+ P
Sbjct: 419 ALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEP 478
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
N +T++ VLSAC++AGL++EG H ++ + NIE +HY CMVDLLGRAG+LKEA L
Sbjct: 479 NNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEML 538
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I + + +D V+W +LL ACRIH +V++ + ++ +L P + G HVLLSN+YA+ G W
Sbjct: 539 INQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNW 597
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
V +S M+ RL K P S V++ ++H F+ GD HP I E LEEL K++E+
Sbjct: 598 SKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKEL 657
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------------NLRVCGDCHTV 610
GYV D V+ D+D+E+K +L HSEKLA NLRVCGDCHT
Sbjct: 658 GYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTW 717
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
++ +SK+V R+I+ RD KRFH+F++GLCSCGDYW
Sbjct: 718 MKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 233/456 (51%), Gaps = 30/456 (6%)
Query: 64 MRKLSLTPT-RST--FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
+RKL +T T +ST + I+ C + + + A GFH + + LID Y K
Sbjct: 65 IRKLCITETIQSTKLYSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLK 122
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG + ARK+FDE+P R+IV+W SM+ Y++N ++EA+ +++ +
Sbjct: 123 CGSVVYARKVFDEVPH--RHIVAWNSMIASYIRNGRSKEAIDIYQRMV------------ 168
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD-SEVGVGNTLIDAYARGGHV 239
D + D +SV A S + + + AHG + G S V VG+ L+D YA+ G +
Sbjct: 169 PDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKM 228
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+R V D ++ KD V + ++I Y+ +G E+L VF M K ++ N TLS+VL+
Sbjct: 229 RDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKK-GIEANEYTLSSVLVC 287
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
+L L G+ IH ++K LE +V TS++ MY +CG VD + K F Q N +W
Sbjct: 288 CGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTW 347
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
T++I G + R AL F +M+++ + PN T SVL ACS ++++G ++ +
Sbjct: 348 TSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQ-IHAIVM 406
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI----HKNV 475
+F ++ ++D G+ G + A + G+ ++ D V S++ + H+ +
Sbjct: 407 KFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL-LEVDVVSVNSMIYSYAQNGFGHEAL 465
Query: 476 DLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
L + K LEPNN + +LS NAG E+
Sbjct: 466 QL--FSGMKDTGLEPNNVTWLGVLSAC-NNAGLLEE 498
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 174/367 (47%), Gaps = 25/367 (6%)
Query: 13 VSNVDKHSTNTNLTTLFNKYVDK---------NNVFSWNSVIADLARGGDSVEALRAFSS 63
VSNV S ++ F K D +V + ++I + G+ E+L+ F +
Sbjct: 209 VSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRN 268
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M K + T + C L DL SG+ H G V ++L+ MY +CG
Sbjct: 269 MTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGL 328
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ D+ K+F + N V+WTS++ G VQN ALL F++ L +
Sbjct: 329 VDDSLKVFKQFIN--PNQVTWTSVIVGLVQNGREEIALLKFRQML------------RSS 374
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ +S ++SVL ACS + + + H V+K G D + VG LID Y + G +++R
Sbjct: 375 ITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIAR 434
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VF+G++E D V+ NS+I YAQNG EAL +F M K T ++ N VT VL A +
Sbjct: 435 SVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGM-KDTGLEPNNVTWLGVLSACNNA 493
Query: 304 GVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
G+L G I ++E + ++D+ + G++ A NQ+ +V W +
Sbjct: 494 GLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTL 553
Query: 363 IAGYGMH 369
++ +H
Sbjct: 554 LSACRIH 560
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/630 (37%), Positives = 374/630 (59%), Gaps = 36/630 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
+V +WN+++A A G A+ M+ + L P ST + + L G
Sbjct: 164 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSV 223
Query: 96 HQ---QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H +A++ V + +AL+DMY+KC L A ++F + +RN V+W++++ G+V
Sbjct: 224 HAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGM--TVRNEVTWSALIGGFV 281
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
D EA LFK+ L+E F+ + ++AS L C+ + + H
Sbjct: 282 LCDRMTEAFNLFKDMLVE-----------GMCFLSATSVASALRVCASLADLRMGTQLHA 330
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ K G +++ GN+L+ YA+ G ++ + +FD + KD +++ ++++ Y QNG A E
Sbjct: 331 LLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEE 390
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A VF +M ++ +V+ + T+ +++ A +HL L+ G+C H VI L + S+I
Sbjct: 391 AFLVFKKM-QACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLI 449
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG++DL+R+ F++M +++ SW MIAGYG+H +EA LF M G P+ +
Sbjct: 450 DMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDV 509
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+ +++ACSH+GLV EG HW +TM H++ I P +EHY CMVDLL R G L EAY I+
Sbjct: 510 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQS 569
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M +KAD VWG+LLGACRIHKN+DLG+ ++ + +L P G VLLSNI++ AGR+++
Sbjct: 570 MPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEA 629
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R + K + K+PG S +E+ G +HAF+ GD+ HP IY L+ + + ++++GY
Sbjct: 630 AEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQ 689
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D + V+ D+++EEKE L HSEKLA NLRVCGDCHT I+ +
Sbjct: 690 ADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYM 749
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ V +R I+VRD+ RFH+FK+G CSCGD+W
Sbjct: 750 TLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 220/440 (50%), Gaps = 26/440 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
++N++I + G A+ + SM + P + TFP +K+CSAL DL +G+ H A
Sbjct: 66 AYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHA 125
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G H D+FVS+ALID+Y +C A +F ++P +R++V+W +ML GY +
Sbjct: 126 AAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMP--MRDVVAWNAMLAGYANHGMYHH 183
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+ LL+ + GG N+ + S+L ++ H + ++
Sbjct: 184 AI----AHLLDMQDRGGLRPNAST-------LVSLLPLLAQHGALFQGTSVHAYCLRAYL 232
Query: 220 DS---EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
D +V +G L+D YA+ H+ + +VF GM ++ VTW+++I + EA ++
Sbjct: 233 DQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNL 292
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F M+ +A ++++ L A L LR+G +H + K + + G S++ MY
Sbjct: 293 FKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYA 352
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
K G ++ A F+++ K+ S+ A+++GY + +A EA +F KM V+P+ T VS
Sbjct: 353 KAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVS 412
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPG--VEHYGC--MVDLLGRAGKLKEAYDLIEG 452
++ ACSH +Q G H I G +E C ++D+ + G++ + + +
Sbjct: 413 LIPACSHLAALQHG-----RCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDK 467
Query: 453 MKVKADFVVWGSLLGACRIH 472
M + D V W +++ IH
Sbjct: 468 MPAR-DIVSWNTMIAGYGIH 486
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 165/351 (47%), Gaps = 24/351 (6%)
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G+L+ AR++FD IP + ++ +++ Y A+ L++ L
Sbjct: 47 GQLALARQVFDRIPA--PDARAYNALIRAYSWRGPFHAAIDLYRSMLYFR---------- 94
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
V + VL ACS + H G +++ V LID Y R
Sbjct: 95 --VPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGP 152
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ VF M +D V WN+++A YA +G+ A+ M ++ NA TL ++L +A
Sbjct: 153 AANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLA 212
Query: 302 HLGVLRLGKCIHDQVIKMDL---EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
G L G +H ++ L EE V++GT+++DMY KC + A + F+ M +N +
Sbjct: 213 QHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVT 272
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA---CSHAGLVQEGWHWLN 415
W+A+I G+ + R EA +LF M+ G+ +++ SV SA C+ ++ G L+
Sbjct: 273 WSALIGGFVLCDRMTEAFNLFKDMLVEGM--CFLSATSVASALRVCASLADLRMGTQ-LH 329
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ + I + ++ + +AG + EA L + + +K D + +G+LL
Sbjct: 330 ALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIK-DTISYGALL 379
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 21/256 (8%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S++S K T LF++ K+ + S+ ++++ + G + EA F M+ ++
Sbjct: 345 NSLLSMYAKAGLINEATMLFDEIAIKDTI-SYGALLSGYVQNGKAEEAFLVFKKMQACNV 403
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P +T I +CS L L G+ +H I G + + ++LIDMY+KCG + +R+
Sbjct: 404 QPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQ 463
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FD++P R+IVSW +M+ GY + +EA LF S + D V
Sbjct: 464 VFDKMPA--RDIVSWNTMIAGYGIHGLGKEATTLF------------LSMKNQGFEPDDV 509
Query: 190 AIASVLSACSRVTVNGVTEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
+++ACS + VTEG H F K G + ++D ARGG +D + +
Sbjct: 510 TFICLIAACSHSGL--VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFI 567
Query: 247 DGM-IEKDAVTWNSII 261
M ++ D W +++
Sbjct: 568 QSMPLKADVRVWGALL 583
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 15/239 (6%)
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G + ++R+VFD + DA +N++I Y+ G A+D++ M+ V N T V
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLY-FRVPPNKYTFPFV 105
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A + L L G+ IH + L + V T++ID+Y +C + A F +M ++V
Sbjct: 106 LKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDV 165
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
+W AM+AGY H A+ M + G+RPN T VS+L L Q G +
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPL-----LAQHGALFQG 220
Query: 416 TMGHEFNIEPGVEHY-------GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
T H + + ++ ++D+ + L A + GM V+ + V W +L+G
Sbjct: 221 TSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNE-VTWSALIG 278
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/595 (39%), Positives = 359/595 (60%), Gaps = 35/595 (5%)
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
SL P R+ + + C+ L L G+ H F D+ + + +++MY+KCG L +A
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
+ LFD++P +++VSWT +++GY Q+ A EAL LF + L G N
Sbjct: 160 QDLFDKMP--TKDMVSWTVLISGYSQSGQASEALALFPKMLHL-----GFQPNE------ 206
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
++S+L A + H F +K G+D V VG++L+D YAR H+ ++ +F+
Sbjct: 207 -FTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFN 265
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ K+ V+WN++IA +A+ G + +F QM++ + T S+VL A A G L
Sbjct: 266 SLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQ-GFEPTHFTYSSVL-ACASSGSLE 323
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
GK +H VIK + +G ++IDMY K G + A+K F ++ ++++ SW ++I+GY
Sbjct: 324 QGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYA 383
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
H EAL LF +M+KA V+PN ITF+SVL+ACSH+GL+ EG ++ M + IE V
Sbjct: 384 QHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQV 442
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
H+ +VDLLGRAG+L EA IE M +K VWG+LLGACR+HKN+DLG AA+++FE
Sbjct: 443 AHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFE 502
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
L+P++ G HVLLSNIYA+AGR D + R +MK + K P S VE+ +VH F+ D
Sbjct: 503 LDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDD 562
Query: 548 EHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------- 599
HP E+I E+++ K++E+GYV D + V+ ++Q+++E+ L+ HSEKLA
Sbjct: 563 SHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKT 622
Query: 600 ----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
N+R+CGDCH+ + S+V+ REI+VRD+ RFH+F G+CSC DYW
Sbjct: 623 PPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 184/352 (52%), Gaps = 22/352 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K K+ V SW +I+ ++ G + EAL F M L P T +K+
Sbjct: 162 LFDKMPTKDMV-SWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
H G+Q H + +G+ +V V S+L+DMY++ + +A+ +F+ + +N+VSW ++
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA--KNVVSWNAL 278
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + + LF + L + E +SVL AC+
Sbjct: 279 IAGHARKGEGEHVMRLFXQMLRQGFE------------PTHFTYSSVL-ACASSGSLEQG 325
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H VIK G +GNTLID YA+ G + ++KVF ++++D V+WNSII+ YAQ+
Sbjct: 326 KWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQH 385
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL AEAL +F+QM+K+ V+ N +T +VL A +H G+L G+ + + K +E V
Sbjct: 386 GLGAEALQLFEQMLKA-KVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAH 444
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMHCRAREALDL 378
+++D+ + G+++ A K +M K + W A++ CR + +DL
Sbjct: 445 HVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGA----CRMHKNMDL 492
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/571 (42%), Positives = 350/571 (61%), Gaps = 33/571 (5%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G H Q G D S+ L++MYSKCG + ARKLFDE+P +R++VSW +M+ +
Sbjct: 66 GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP--VRSLVSWNTMVGSH 123
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
QN + +AL+LF + E + C ++SV+ AC+ + H
Sbjct: 124 TQNGDCEKALVLFMQMQKEGTSC------------SEFTVSSVVCACAAKCCVFECKQLH 171
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
GF +K DS V VG L+D YA+ G V + VF+ M E+ VTW+S++A Y QN L
Sbjct: 172 GFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYE 231
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EAL +F + ++ ++ N T+S+ L A A L GK + K + ++ V +S+
Sbjct: 232 EALVLFHR-AQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSL 290
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
IDMY KCG ++ A F+ ++EKNV W A+++G+ H R+ EA+ F KM + G+ PN
Sbjct: 291 IDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPND 350
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
IT++SVLSACSH GLV++G + + M N+ P V HY CMVD+LGRAG L EA D I+
Sbjct: 351 ITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFID 410
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M A +WGSLL +CRI++N++L E+AAK LFE+EP+N G HVLLSNIYA RWE+
Sbjct: 411 RMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEE 470
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
V R R+L+K + K G S +E++ KVH+F+VG++ HP+ +IY LE+L +++++GY
Sbjct: 471 VARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGY 530
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
+HDV++ K+ LR HSEKLA NLR+CGDCH+ ++L
Sbjct: 531 KAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKL 590
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S + +REI+VRD+ RFH+FK+G CSCG++W
Sbjct: 591 ASSITEREIIVRDTNRFHHFKNGYCSCGEFW 621
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 181/344 (52%), Gaps = 21/344 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SWN+++ + GD +AL F M+K + + T + +C+A + KQ H
Sbjct: 112 SLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLH 171
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A +VFV +AL+D+Y+KCG + DA +F+ +P+ R+ V+W+SM+ GYVQN+
Sbjct: 172 GFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPE--RSDVTWSSMVAGYVQNEL 229
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EAL+LF ++ G N + A A+ + V V+ K
Sbjct: 230 YEEALVLF-----HRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVS-------CK 277
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G S + V ++LID YA+ G ++ + VF + EK+ V WN+I++ ++++ + EA+
Sbjct: 278 TGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIY 337
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMY 335
F++M + + N +T +VL A +HLG++ G+ D +I++ ++ +V+ + ++D+
Sbjct: 338 FEKM-QQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDIL 396
Query: 336 CKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
+ G + A+ ++M + W +++A CR L+L
Sbjct: 397 GRAGLLHEAKDFIDRMPFDATASMWGSLLAS----CRIYRNLEL 436
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
+SS++ K T+F+ V++ NV WN++++ +R S+EA+ F M+++
Sbjct: 287 ISSLIDMYAKCGIIEEAYTVFSS-VEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMG 345
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF-IFGFHRDVFVSSALIDMYSKCGELSDA 127
+ P T+ + +CS L + G++ + +V S ++D+ + G L +A
Sbjct: 346 ICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEA 405
Query: 128 RKLFDEIP 135
+ D +P
Sbjct: 406 KDFIDRMP 413
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/630 (38%), Positives = 353/630 (56%), Gaps = 33/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ +W+++I A G EALR F M++ + P R TF + + L
Sbjct: 322 MKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEEL 381
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H G + +AL+++Y +C DAR +FD++ + N++SW SM+ YV
Sbjct: 382 SRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQL--ELPNLISWNSMIGIYV 439
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q + +AL LF+ + D V ++L AC+ + + H
Sbjct: 440 QCERHDDALQLFRTM------------QQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQ 487
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V + G V +L++ YA+ G +DV+ + M E+ WN +I YA +G + E
Sbjct: 488 CVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSRE 547
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL+ + Q ++ + + VT +VL A L GK IH ++ L+ VIV ++
Sbjct: 548 ALEAY-QKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALT 606
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+MY KCG ++ AR+ F+ M ++ SW M+ Y H + E L L KM + GV+ N I
Sbjct: 607 NMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGI 666
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TFVSVLS+CSHAGL+ EG + +++GH+ IE EHYGC+VDLLGRAGKL+EA I
Sbjct: 667 TFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISK 726
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M ++ V W SLLGACR+ K++D G++AA KL EL+P N V+LSNIY+ G W++
Sbjct: 727 MPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNA 786
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+ R M +RR+ K PG S ++++ KVH F V D HP+ +IY+ +EEL ++E GYV
Sbjct: 787 AKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYV 846
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D V+HDVD+E+KE L HSEKLA NLRVC DCHT + I
Sbjct: 847 PDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFI 906
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+ REIVVRD+ RFH+F+DG CSC DYW
Sbjct: 907 SKITGREIVVRDNHRFHHFRDGSCSCKDYW 936
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 224/440 (50%), Gaps = 26/440 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ NV SWN +I+ + EAL F +M + P T + SC + +L G
Sbjct: 18 IRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDG 77
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY- 151
H + GF ++ V++AL++MY KCG L DA+ +F+E+ ++ N+V+W +ML Y
Sbjct: 78 ILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEK--NVVTWNAMLGVYS 135
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA- 210
+Q + A+ LF LLE V + + +VL+ S V + + +G
Sbjct: 136 LQGCCWKLAVELFTRMLLE------------GVKANVITFLNVLN--SVVDPDALRKGKF 181
Query: 211 -HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
H V + +V V L++ Y + G + +RKVFDGM + TWNS+I+ Y+ +
Sbjct: 182 IHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISER 241
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
+ EA +F +M + + +C+ VT ++L A + L+ GK + + + + E + VGT
Sbjct: 242 SGEAFFIFQRMQQEGE-RCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGT 300
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
++I MY +C + A + F +MK+ N+ +W+A+I + H EAL F M + G+ P
Sbjct: 301 ALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILP 360
Query: 390 NYITFVSVLSACSHAGLVQE--GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
N +TF+S+L+ + ++E H L T E ++ +V++ GR +A
Sbjct: 361 NRVTFISLLNGFTTPSGLEELSRIHLLIT---EHGLDDTTTMRNALVNVYGRCESPDDAR 417
Query: 448 DLIEGMKVKADFVVWGSLLG 467
+ + +++ + + W S++G
Sbjct: 418 TVFDQLEL-PNLISWNSMIG 436
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 218/433 (50%), Gaps = 35/433 (8%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MYS+CG L DA F +I R RN+VSW M++ Y + +EAL LF LLE
Sbjct: 1 MYSRCGSLGDAVAAFGKI--RARNVVSWNVMISAYSSYKSFQEALALFHAMLLE------ 52
Query: 177 ASENSDNVFVDSVAIASVLSACS--RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYA 234
V +++ + +VL++C R +G+ H ++RGF V L++ Y
Sbjct: 53 ------GVAPNAITLVAVLNSCGSFRELRDGIL--VHALSLERGFFQNTLVATALLNMYG 104
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE-ALDVFDQMVKSTDVKCNAVTL 293
+ G + ++ VF+ M EK+ VTWN+++ +Y+ G + A+++F +M+ VK N +T
Sbjct: 105 KCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLE-GVKANVITF 163
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
VL ++ LR GK IH V + + V V T++++ Y KCG + ARK F+ M
Sbjct: 164 LNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPC 223
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
++V +W +MI+ Y + R+ EA +F +M + G R + +TF+S+L AC + +Q G H
Sbjct: 224 RSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHV 283
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
++ E + E + ++ + R ++A + MK + + + W +++ A H
Sbjct: 284 RESIS-ETSFELDLFVGTALITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFADHG 341
Query: 474 NVDLGEIAAKKLFELE------PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKT 527
+ GE A + F + PN + LL+ +G E++ R L+ L T
Sbjct: 342 HC--GE--ALRYFRMMQQEGILPNRVTFISLLNGFTTPSG-LEELSRIHLLITEHGLDDT 396
Query: 528 PGF--SLVELRGK 538
+LV + G+
Sbjct: 397 TTMRNALVNVYGR 409
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 125/264 (47%), Gaps = 20/264 (7%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L S V + + N+ + ++ + + +D+ + +WN +I A G S EAL A+
Sbjct: 494 LGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQ 553
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
++ ++ + TF + +C++ L GK H A G DV V +AL +MYSKCG
Sbjct: 554 KLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCG 613
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+ +AR++FD +P IR+ VSW ML Y Q+ + E L L ++ +
Sbjct: 614 SMENARRIFDSMP--IRSAVSWNGMLQAYAQHGESEEVLKLIRKM------------EQE 659
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGA---HGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
V ++ + SVLS+CS + + EG H RG + + L+D R G +
Sbjct: 660 GVKLNGITFVSVLSSCSHAGL--IAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKL 717
Query: 240 DVSRKVFDGM-IEKDAVTWNSIIA 262
+ K M +E VTW S++
Sbjct: 718 QEAEKYISKMPLEPGIVTWASLLG 741
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/571 (42%), Positives = 350/571 (61%), Gaps = 33/571 (5%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G H Q G D S+ L++MYSKCG + ARKLFDE+P +R++VSW +M+ +
Sbjct: 39 GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP--VRSLVSWNTMVGSH 96
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
QN + +AL+LF + E + C ++SV+ AC+ + H
Sbjct: 97 TQNGDCEKALVLFMQMQKEGTSC------------SEFTVSSVVCACAAKCCVFECKQLH 144
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
GF +K DS V VG L+D YA+ G V + VF+ M E+ VTW+S++A Y QN L
Sbjct: 145 GFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYE 204
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EAL +F + ++ ++ N T+S+ L A A L GK + K + ++ V +S+
Sbjct: 205 EALVLFHR-AQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSL 263
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
IDMY KCG ++ A F+ ++EKNV W A+++G+ H R+ EA+ F KM + G+ PN
Sbjct: 264 IDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPND 323
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
IT++SVLSACSH GLV++G + + M N+ P V HY CMVD+LGRAG L EA D I+
Sbjct: 324 ITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFID 383
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M A +WGSLL +CRI++N++L E+AAK LFE+EP+N G HVLLSNIYA RWE+
Sbjct: 384 RMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEE 443
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
V R R+L+K + K G S +E++ KVH+F+VG++ HP+ +IY LE+L +++++GY
Sbjct: 444 VARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGY 503
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
+HDV++ K+ LR HSEKLA NLR+CGDCH+ ++L
Sbjct: 504 KAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKL 563
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S + +REI+VRD+ RFH+FK+G CSCG++W
Sbjct: 564 ASSITEREIIVRDTNRFHHFKNGYCSCGEFW 594
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 181/344 (52%), Gaps = 21/344 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SWN+++ + GD +AL F M+K + + T + +C+A + KQ H
Sbjct: 85 SLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLH 144
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A +VFV +AL+D+Y+KCG + DA +F+ +P+ R+ V+W+SM+ GYVQN+
Sbjct: 145 GFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPE--RSDVTWSSMVAGYVQNEL 202
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EAL+LF ++ G N + A A+ + V V+ K
Sbjct: 203 YEEALVLF-----HRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVS-------CK 250
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G S + V ++LID YA+ G ++ + VF + EK+ V WN+I++ ++++ + EA+
Sbjct: 251 TGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIY 310
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMY 335
F++M + + N +T +VL A +HLG++ G+ D +I++ ++ +V+ + ++D+
Sbjct: 311 FEKM-QQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDIL 369
Query: 336 CKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
+ G + A+ ++M + W +++A CR L+L
Sbjct: 370 GRAGLLHEAKDFIDRMPFDATASMWGSLLAS----CRIYRNLEL 409
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
+SS++ K T+F+ V++ NV WN++++ +R S+EA+ F M+++
Sbjct: 260 ISSLIDMYAKCGIIEEAYTVFSS-VEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMG 318
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF-IFGFHRDVFVSSALIDMYSKCGELSDA 127
+ P T+ + +CS L + G++ + +V S ++D+ + G L +A
Sbjct: 319 ICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEA 378
Query: 128 RKLFDEIP 135
+ D +P
Sbjct: 379 KDFIDRMP 386
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/627 (38%), Positives = 371/627 (59%), Gaps = 34/627 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD-LHSGKQA 95
++ SWNS+I+ A+ E++ F + L P T +++CS+L D L+ +Q
Sbjct: 969 DLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQI 1028
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H A G D FV++ LID+YSK G++ +A LF + ++ W +M+ GY+ +
Sbjct: 1029 HVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQN--KDDLDLACWNAMMFGYIIGN 1086
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+ ++AL LF L+ +S E SD + +A+ AC + + + H I
Sbjct: 1087 DGKKALELFS--LIHKS-----GEKSDQI-----TLATAAKACGCLVLLDQGKQIHAHAI 1134
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
K GFDS++ V + ++D Y + G + + VF+ + D V W S+I+ NG +AL
Sbjct: 1135 KAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALR 1194
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
++ +M +S V + T + ++ A + + L G+ +H VIK+D VGTS++DMY
Sbjct: 1195 IYHRMRQSR-VMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMY 1253
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG ++ A + F +M +N+ W AM+ G H A EA++LF M G+ P+ ++F+
Sbjct: 1254 AKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFI 1313
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
+LSACSHAGL E + +L++M +++ IEP +EHY C+VD LGRAG ++EA +IE M
Sbjct: 1314 GILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPF 1373
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
KA + +LLGACRI +V+ G+ A +LF LEP + +VLLSNIYA A RW+DV
Sbjct: 1374 KASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDA 1433
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
R +MK + + K PGFS ++++ +H F+V D+ HPQ + IY+ +EE+ ++E GYV D
Sbjct: 1434 RKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDT 1493
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
V+ DV+ EEKE +L HSEKLA NLRVCGDCH I+ ISKV
Sbjct: 1494 EFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKV 1553
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
+REIV+RD+ RFH+F+DG+CSCGDYW
Sbjct: 1554 FEREIVLRDANRFHHFRDGVCSCGDYW 1580
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 237/472 (50%), Gaps = 24/472 (5%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D +VF WN +++ GD+ A+ F +M L++ T + + + DL GK
Sbjct: 865 DNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGK 924
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H A G DV V+++L++MYSK G AR++F+++ + +++SW SM++ Q
Sbjct: 925 QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDM--KHLDLISWNSMISSCAQ 982
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG--VTEGAH 211
+ E++ LF + L E + D +ASVL ACS + ++G ++ H
Sbjct: 983 SSLEEESVNLFIDLLHE------------GLKPDHFTLASVLRACSSL-IDGLNISRQIH 1029
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+K G ++ V TLID Y++ G ++ + +F + D WN+++ Y
Sbjct: 1030 VHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGK 1089
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+AL++F + KS + K + +TL+ A L +L GK IH IK + + V + I
Sbjct: 1090 KALELFSLIHKSGE-KSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 1148
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+DMY KCG + A FN + + +WT+MI+G + +AL ++++M ++ V P+
Sbjct: 1149 LDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDE 1208
Query: 392 ITFVSVLSACSHAGLVQEGWHW-LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
TF +++ A S +++G N + + +P V +VD+ + G +++AY L
Sbjct: 1209 YTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLF 1266
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVD--LGEIAAKKLFELEPNNCGYHVLLS 500
+ M V+ + +W ++L H N + + + K +EP+ + +LS
Sbjct: 1267 KKMNVR-NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 1317
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 220/487 (45%), Gaps = 69/487 (14%)
Query: 3 LSKSSSVSSVVS-NVDKHSTNTNLTTLFNK------------YVDKNNVFSWNSVIADLA 49
L K + VVS + H + NL T+++K + ++ +WN+++ A
Sbjct: 639 LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 698
Query: 50 -----RGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF 104
G++ E L F +R + TR T +K C L + + H A G
Sbjct: 699 ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGL 758
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
DVFVS AL+++YSKCG + DAR LFD + R R++V W ML GYVQ +EA LF
Sbjct: 759 EWDVFVSGALVNIYSKCGRMRDARLLFDWM--RERDVVLWNMMLKGYVQLGLEKEAFQLF 816
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
EF + + D ++ +L+ S V + EG + + +++
Sbjct: 817 SEF------------HRSGLRPDEFSVQLILNGVSEVNWD---EGKWLADQVQAYAAKLS 861
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+ + D + ++K+ + + D W +I NGL
Sbjct: 862 LSDDNPDVFC------WNKKLSECLWAGD--NWGAIECFVNMNGL--------------- 898
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
++ +AVTL VL A+A L LGK +H +K L+ V V S+++MY K G A
Sbjct: 899 NIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFA 958
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R+ FN MK ++ SW +MI+ E+++LF ++ G++P++ T SVL ACS
Sbjct: 959 REVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSL 1018
Query: 405 --GL---VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
GL Q H L T NI ++D+ ++GK++EA L + K D
Sbjct: 1019 IDGLNISRQIHVHALKTG----NIADSFV-ATTLIDVYSKSGKMEEAEFLFQN-KDDLDL 1072
Query: 460 VVWGSLL 466
W +++
Sbjct: 1073 ACWNAMM 1079
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 48/328 (14%)
Query: 21 TNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS-MRKLSLTPTRSTFPC- 78
T L +Y+ + + A L R G+ A+R K +++P +T P
Sbjct: 542 TPARLPVAVQRYLLEEEGLDYTEPQAGLLRVGNQSNAMRNVQRHFHKTTISPFSNTLPTF 601
Query: 79 -------------------------AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSA 113
+++ + H+L GK H + + G D F+S+
Sbjct: 602 LYLHFTSLFSPFSSFSHSSSSQWFSLLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNN 661
Query: 114 LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV----QND-NAREALLLFKEFL 168
L+ MYSKCG LS AR++FD P+R ++V+W ++L Y ND NA+E L LF+
Sbjct: 662 LLTMYSKCGSLSSARQVFDTTPER--DLVTWNAILGAYAASVDSNDGNAQEGLHLFR--- 716
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
L + G + + +A VL C EG HG+ IK G + +V V
Sbjct: 717 LLRASLGSTTR---------MTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGA 767
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
L++ Y++ G + +R +FD M E+D V WN ++ Y Q GL EA +F + +S ++
Sbjct: 768 LVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSG-LRP 826
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
+ ++ +L ++ + GK + DQV
Sbjct: 827 DEFSVQLILNGVSEVN-WDEGKWLADQV 853
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 32/224 (14%)
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L LGKC H +++ + +++ MY KCG + AR+ F+ E+++ +W A++
Sbjct: 637 LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 696
Query: 366 YGMHC-----RAREALDLFYKMIKAGV-RPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
Y A+E L LF ++++A + +T VL C ++G + W H
Sbjct: 697 YAASVDSNDGNAQEGLHLF-RLLRASLGSTTRMTLAPVLKLCLNSGCL-----WAAEGVH 750
Query: 420 EFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
+ I+ G+E G +V++ + G++++A L + M+ + D V+W +L V
Sbjct: 751 GYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRER-DVVLWNMMLKGY-----V 804
Query: 476 DLG-EIAAKKLFE------LEPNNCGYHVLL---SNIYANAGRW 509
LG E A +LF L P+ ++L S + + G+W
Sbjct: 805 QLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKW 848
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/634 (38%), Positives = 361/634 (56%), Gaps = 35/634 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ NV SW S+++ LA+ G AL F MR+ + P TFPC K+ ++L
Sbjct: 66 RLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPV 125
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+GKQ H A G DVFV + DMY K DARKLFDEIP+R N+ +W + ++
Sbjct: 126 TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPER--NLETWNAYISN 183
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
V + +EA+ F EF GG +S+ L+ACS + +
Sbjct: 184 SVTDGRPKEAIEAFIEF----RRIGGQP--------NSITFCGFLNACSDGLLLDLGMQM 231
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG V + GFD++V V N LID Y + + S +F M K+AV+W S++A Y QN
Sbjct: 232 HGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHED 291
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+A ++ + K V+ + +S+VL A A + L LG+ IH +K +E ++ VG++
Sbjct: 292 EKASVLYLRSRKEI-VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSA 350
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK--AGVR 388
++DMY KCG ++ + +AF++M EKN+ + ++I GY + AL LF M G
Sbjct: 351 LVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPA 410
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
PNY+TFVS+LSACS AG V+ G ++M + IEPG EHY C+VD+LGRAG +++A++
Sbjct: 411 PNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFE 470
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
I+ M +K VWG+L ACR+H LG +AA+ LF+L+P + G HVLLSN +A AGR
Sbjct: 471 FIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGR 530
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
W + R MK + K G+S + ++ +VHAF D+ H +++I L +L K++
Sbjct: 531 WAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEA 590
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
GY D+ ++D+++EEK + HSEKLA NLR+CGDCH+
Sbjct: 591 AGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNLRICGDCHSF 650
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +S V REI+VRD+ RFH FKDG+CSC DYW
Sbjct: 651 FKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 182/387 (47%), Gaps = 22/387 (5%)
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL 168
F+++ LI+MYSK AR + P R N+VSWTS+++G QN + AL F E
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPAR--NVVSWTSLVSGLAQNGHFSTALFEFFEMR 100
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
E G + N A+AS+ R+ V G + H +K G +V VG +
Sbjct: 101 RE-----GVAPNDFTFPCVFKAVASL-----RLPVTG--KQIHALAVKCGRILDVFVGCS 148
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
D Y + D +RK+FD + E++ TWN+ I+ +G EA++ F + + +
Sbjct: 149 AFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEF-RRIGGQP 207
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
N++T L A + +L LG +H V + + V V +ID Y KC Q+ + F
Sbjct: 208 NSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIF 267
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
+M KN SW +++A Y + +A L+ + K V + SVLSAC+ ++
Sbjct: 268 AEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLE 327
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
G ++ + +E + +VD+ G+ G ++++ + M K + V SL+G
Sbjct: 328 LG-RSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTLNSLIGG 385
Query: 469 CRIHKNVDLGEIAAKKLFE-LEPNNCG 494
VD+ A LFE + P CG
Sbjct: 386 YAHQGQVDM----ALALFEDMAPRGCG 408
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 306 LRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
+RLG+ +H +++K +D + +I+MY K + AR +NV SWT++++
Sbjct: 22 MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVS 81
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
G + AL F++M + GV PN TF V A + L G
Sbjct: 82 GLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTG 127
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 249/630 (39%), Positives = 382/630 (60%), Gaps = 36/630 (5%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D NN N +I L + G+ +AL+ S PT+ T+ I SC+ + L G
Sbjct: 46 DSNNN---NPLIQSLCKQGNLNQALQVLSQ----EPNPTQHTYELLILSCTRQNSLPQGI 98
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H+ G +D F+++ LI+MYS+ + +ARK+FD+ R R I W ++
Sbjct: 99 DLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKT--RKRTIYVWNALFRALTL 156
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
RE L L++ + G S+ +V +AS A + +NG HG
Sbjct: 157 AGYGREVLDLYRRM----NRIGVPSDRFTYTYVLKACVAS--EAFVSLLLNG--REIHGH 208
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+++ GF+ V + TL+D YAR G V + +VFD M K+ V+W+++IA Y++NG EA
Sbjct: 209 ILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEA 268
Query: 274 LDVFDQM-VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
L++F +M +++ D+ N+VT+ +VL A A L L GK +H +++ L+ + V ++++
Sbjct: 269 LELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALV 328
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+Y +CG ++L + F +M++++V SW ++I+ YG+H R+A+ +F +MI G+ P+ I
Sbjct: 329 TVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPI 388
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
+FVSVL ACSHAGLV+EG +M I P VEHY CMVDLLGRA +L EA +I+
Sbjct: 389 SFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDD 448
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M+++ VWGSLLG+CRIH NV+L E A +LFELEP N G +VLL++IYA A W +V
Sbjct: 449 MRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEV 508
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+R + L++ R L K PG S +E+R K+++F+ D+ +PQ E+++ L +L+++++E GYV
Sbjct: 509 KRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYV 568
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D V++D+D EEKE + HSEKLA NLR+C DCH+V + I
Sbjct: 569 PDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFI 628
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK +REI+VRD RFH F+DG+CSCGDYW
Sbjct: 629 SKFANREILVRDVNRFHLFQDGVCSCGDYW 658
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++K +V SWNS+I+ G +A++ F M L+P+ +F + +CS + G
Sbjct: 347 MEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEG 406
Query: 93 KQAHQQAFIFGFHRDVFVS----SALIDMYSKCGELSDARKLFDEI 134
K ++ + G +F S + ++D+ + L +A K+ D++
Sbjct: 407 KVLF-ESMVRG--HKIFPSVEHYACMVDLLGRANRLDEAAKIIDDM 449
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/666 (36%), Positives = 376/666 (56%), Gaps = 65/666 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +++N V SW S+I + S EA+ F M + + P T C I +C+ L
Sbjct: 187 LFDGMLERN-VVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLK 245
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL GK+ G + +AL+DMY KCG++ AR++FDE + N+V + ++
Sbjct: 246 DLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANK--NLVMYNTI 303
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ YV ++ A + L++ E L + D V + S ++AC+++ V
Sbjct: 304 MSNYVHHEWASDVLVILDEMLQKGPR------------PDKVTMLSTIAACAQLGDLSVG 351
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAY-------------------------------ARG 236
+ +H +V++ G + + N +ID Y R
Sbjct: 352 KSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRD 411
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G ++++ ++FD M+E+D V+WN++I Q + EA+++F +M ++ + + VT+ +
Sbjct: 412 GDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREM-QNQGIPGDRVTMVGI 470
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
A +LG L L K + + K D+ + +GT+++DM+ +CG A F +M++++V
Sbjct: 471 ASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDV 530
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+WTA I M A++LF +M++ V+P+ + FV++L+ACSH G V +G +
Sbjct: 531 SAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWS 590
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M I P + HYGCMVDLLGRAG L+EA DLI+ M ++ + VVWGSLL ACR HKNV+
Sbjct: 591 MEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVE 650
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
L AA+KL +L P G HVLLSNIYA+AG+W DV R R MK + + K PG S +E++
Sbjct: 651 LAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQ 710
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
G +H F GD+ H ++ I LEE+N +L E GYV D T+V+ DVD++EKE L HSE
Sbjct: 711 GLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSE 770
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLR+C DCH+ +L+SK+ +REI VRD+ R+H+FK+G C
Sbjct: 771 KLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFC 830
Query: 639 SCGDYW 644
SC DYW
Sbjct: 831 SCRDYW 836
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 229/471 (48%), Gaps = 48/471 (10%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++F +N +I A G +A+ + M + + P + TFP + +CS + L G Q H
Sbjct: 94 SLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVH 153
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G D+FVS++LI Y++CG++ RKLFD + + RN+VSWTS++ GY D
Sbjct: 154 GAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLE--RNVVSWTSLINGYSGRDL 211
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
++EA+ LF + E G V + V + V+SAC+++ + + ++ +
Sbjct: 212 SKEAVSLF----FQMGEAG--------VEPNPVTMVCVISACAKLKDLELGKKVCSYISE 259
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G + + N L+D Y + G + +R++FD K+ V +N+I++ Y + A++ L +
Sbjct: 260 LGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVI 319
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
D+M++ + + VT+ + + A A LG L +GK H V++ LE + +IIDMY
Sbjct: 320 LDEMLQKGP-RPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYM 378
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGY----GMHCRAR------------------- 373
KCG+ + A K F M K V +W ++IAG M R
Sbjct: 379 KCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGA 438
Query: 374 --------EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
EA++LF +M G+ + +T V + SAC + G + W+ T + +I
Sbjct: 439 LVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLA-KWVCTYIEKNDIHV 497
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
++ +VD+ R G A + + M+ K D W + +G + N +
Sbjct: 498 DLQLGTALVDMFSRCGDPSSAMHVFKRME-KRDVSAWTAAIGVMAMEGNTE 547
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 205/408 (50%), Gaps = 35/408 (8%)
Query: 72 TRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF--HRDVFVSSALIDMYSKCGELSD--- 126
TR++ + +C L +L KQ H G H+ + LI + G L
Sbjct: 24 TRNSSSKLLVNCKTLKEL---KQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDY 80
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
AR F + + ++ + ++ GY +A+LL+ + L+ +
Sbjct: 81 ARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVM------------GIVP 128
Query: 187 DSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
D +LSACS++ ++EG HG V+K G + ++ V N+LI YA G VD+ RK
Sbjct: 129 DKYTFPFLLSACSKIL--ALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRK 186
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
+FDGM+E++ V+W S+I Y+ L+ EA+ +F QM ++ V+ N VT+ V+ A A L
Sbjct: 187 LFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEA-GVEPNPVTMVCVISACAKLK 245
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L LGK + + ++ +E S I+ +++DMY KCG + AR+ F++ KN+ + +++
Sbjct: 246 DLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMS 305
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
Y H A + L + +M++ G RP+ +T +S ++AC+ G + G H + +
Sbjct: 306 NYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVG-----KSSHAYVLR 360
Query: 425 PGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
G+E + ++D+ + GK + A + E M K V W SL+
Sbjct: 361 NGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKT-VVTWNSLIAG 407
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/628 (39%), Positives = 358/628 (57%), Gaps = 32/628 (5%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ +V SWNS+I G + + L F M + +T C+ + G+
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H F R+ + L+DMYSKCG+L A+ +F E+ R ++VS+TSM+ GY +
Sbjct: 318 VHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGR--SVVSYTSMIAGYARE 375
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
A EA+ LF+E +EE + + D + +VL+ C+R + + H ++
Sbjct: 376 GLAGEAVKLFEE--MEE----------EGISPDVYTVTAVLNCCARNRLLDEGKRVHEWI 423
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+ ++ V N L+D YA+ G + + VF M KD ++WN++I Y++N A EAL
Sbjct: 424 KENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEAL 483
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+F+ ++ + T++ VL A A L G+ IH +++ V S++DM
Sbjct: 484 SLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y KCG + LAR F+ + K++ SWT MIAGYGMH +EA+ LF +M +AG+ P+ I+F
Sbjct: 544 YAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISF 603
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
VS+L ACSH+GLV EGW + N M HE IEP VEHY C+VD+L R G L +AY IE M
Sbjct: 604 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMP 663
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
+ D +WG+LL CRIH +V L E A+K+FELEP N GY+VL++NIYA A +WE+V+R
Sbjct: 664 IPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKR 723
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTD 574
R + R L K PG S +E++G+V+ F+ GD +P+ EKI +L + ++ E GY
Sbjct: 724 LRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPL 783
Query: 575 MTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISK 616
+ D ++ EKE L HSEKLA NLRVCGDCH + + +SK
Sbjct: 784 TKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSK 843
Query: 617 VVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ REIV+RDS RFH FKDG CSC +W
Sbjct: 844 LTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 216/437 (49%), Gaps = 26/437 (5%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN ++ +LA+ GD ++ F M + TF C KS S+L ++ G+Q H
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYIL 222
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
GF V ++L+ Y K + ARK+FDE+ + R+++SW S++ GYV N A +
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTE--RDVISWNSIINGYVSNGLAEKG 280
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
L +F + L E +D I SV + C+ + + H F +K F
Sbjct: 281 LSVFVQMLFSGIE------------IDLATIVSVFAGCADSRLISLGRAVHCFGVKACFS 328
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
E NTL+D Y++ G +D ++ VF M + V++ S+IA YA+ GLA EA+ +F++M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
+ + + T++AVL A +L GK +H+ + + D+ + V +++DMY KCG
Sbjct: 389 -EEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGS 447
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF-YKMIKAGVRPNYITFVSVLS 399
+ A F++M+ K++ SW +I GY +C A EAL LF +++ P+ T VL
Sbjct: 448 MREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLP 507
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGV---EHYG-CMVDLLGRAGKLKEAYDLIEGMKV 455
AC+ +G H + + G H +VD+ + G L A L + +
Sbjct: 508 ACASLSAFDKGREI-----HGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITS 562
Query: 456 KADFVVWGSLLGACRIH 472
K D V W ++ +H
Sbjct: 563 K-DLVSWTVMIAGYGMH 578
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 217/433 (50%), Gaps = 31/433 (7%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N+ + G+ A++ K + P T ++ C+ L GK+
Sbjct: 65 NTQLRRFCESGNLKNAVKLLHVSGKWDIDP--RTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
GF D + S L MY+ CG+L +A ++FD++ +I + W ++ ++ + ++
Sbjct: 123 NGFVLDSNLGSKLALMYTNCGDLKEASRVFDQV--KIEKALFWNILMNELAKSGDFSGSI 180
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV-TVNGVTEGAHGFVIKRGFD 220
LFK+ + S V +DS + V + S + +VNG E HG+++K GF
Sbjct: 181 GLFKKMM------------SSGVEMDSYTFSCVSKSFSSLRSVNG-GEQLHGYILKSGFG 227
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
VGN+L+ Y + VD +RKVFD M E+D ++WNSII Y NGLA + L VF QM
Sbjct: 228 ERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 287
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
+ S ++ + T+ +V A ++ LG+ +H +K +++DMY KCG
Sbjct: 288 LFS-GIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGD 346
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+D A+ F +M ++V S+T+MIAGY A EA+ LF +M + G+ P+ T +VL+
Sbjct: 347 LDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 401 CSHAGLVQEG-----WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
C+ L+ EG W N MG + + ++D+ + G ++EA + M+V
Sbjct: 407 CARNRLLDEGKRVHEWIKENDMGFDIFVS------NALMDMYAKCGSMREAELVFSEMRV 460
Query: 456 KADFVVWGSLLGA 468
K D + W +++G
Sbjct: 461 K-DIISWNTVIGG 472
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 263/663 (39%), Positives = 380/663 (57%), Gaps = 45/663 (6%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S +++++ K S LF++ + + ++ S+N++I+ A G++ AL FS MR++
Sbjct: 76 SFNAIIAAYAKESRPLIAHQLFDQ-IPEPDLVSYNTLISAYADCGETAPALGLFSGMREM 134
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
L T I +C D+ Q H A GF V V++AL+ Y K G+L DA
Sbjct: 135 GLDMDXFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDA 192
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
+++F + IR+ VSW SM+ Y Q+ +AL LF+E + + VD
Sbjct: 193 KRVFYGMGG-IRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRR------------GLNVD 239
Query: 188 SVAIASVLSA--CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR-GGHVDVSRK 244
+ASVL+A C G+ HG +IK GF VG+ LID Y++ GG + RK
Sbjct: 240 MFTLASVLTAFTCLEDLSGGLQ--FHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRK 297
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNG-LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VF+ + E D V WN++++ Y+QN +AL+ F QM + + N + V+ A ++L
Sbjct: 298 VFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQM-QGIGYRPNDCSFVCVISACSNL 356
Query: 304 GVLRLGKCIHDQVIKMDLEESVI-VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
GK IH +K D+ + I V ++I MY KCG + AR+ F++M E N S +M
Sbjct: 357 SSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSM 416
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
IAGY H E+L LF M++ + P ITF+SVLSAC+H G V+EGW++ N M +FN
Sbjct: 417 IAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFN 476
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
IEP EHY CM+DLLGRAGKL EA +LI M + W SLLGACR H N++L AA
Sbjct: 477 IEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAA 536
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
++ +LEP+N +V+LSN+YA+AGRWE+V R M++R + K PG S +E++ ++H F
Sbjct: 537 NQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVF 596
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQE---EKEMTLRIHSEKLA 599
+ D HP ++IYE+LEE++ K++ GYV D+ + D EKE+ L HSEKLA
Sbjct: 597 VAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLA 656
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLR+CGDCH I+ IS + REI VRD+ RFH FK+G CSCG
Sbjct: 657 VAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCG 716
Query: 642 DYW 644
DYW
Sbjct: 717 DYW 719
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 182/369 (49%), Gaps = 29/369 (7%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M ++S T R F +K+C A DL +GK H + S+ I +YSKCG
Sbjct: 1 MNQISWTLQR--FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGR 58
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE-----------FLLEES 172
L+ ARK F +I N+ S+ +++ Y + A LF + + +
Sbjct: 59 LAWARKAFQDISD--PNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYA 116
Query: 173 ECGGASE--------NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
+CG + + +D +++V++AC G+ H + GFDS V
Sbjct: 117 DCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDV--GLIGQLHSVAVSSGFDSYVS 174
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
V N L+ Y + G +D +++VF GM +D V+WNS+I Y Q+ ++AL +F +MV+
Sbjct: 175 VNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVR- 233
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC-GQVD 342
+ + TL++VL A L L G H Q+IK ++ VG+ +ID+Y KC G +
Sbjct: 234 RGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMS 293
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRARE-ALDLFYKMIKAGVRPNYITFVSVLSAC 401
RK F ++ E ++ W M++GY + E AL+ F +M G RPN +FV V+SAC
Sbjct: 294 DCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISAC 353
Query: 402 SHAGLVQEG 410
S+ +G
Sbjct: 354 SNLSSPSQG 362
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 143/299 (47%), Gaps = 36/299 (12%)
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
D V N +I AYA+ ++ ++FD + E D V++N++I+ YA G A AL +F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M + + + TLSAV+ A V +G+ +H + + V V +++ Y K G
Sbjct: 131 M-REMGLDMDXFTLSAVITACCD-DVGLIGQ-LHSVAVSSGFDSYVSVNNALLTYYGKNG 187
Query: 340 QVDLARKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
+D A++ F M ++ SW +MI YG H +AL LF +M++ G+ + T SVL
Sbjct: 188 DLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVL 247
Query: 399 SACS-----------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR-AGKLKEA 446
+A + H L++ G+H + +G ++DL + G + +
Sbjct: 248 TAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSG------------LIDLYSKCGGGMSDC 295
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE-----PNNCGYHVLLS 500
+ E + + D V+W +++ +N + E A + +++ PN+C + ++S
Sbjct: 296 RKVFEEI-TEPDLVLWNTMVSG--YSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVIS 351
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 256/716 (35%), Positives = 393/716 (54%), Gaps = 76/716 (10%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M L + S ++++S K + +F++ ++V SW ++I G A+ A
Sbjct: 74 MPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSV-SWTTMIVGYNHLGLFKSAVHA 132
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F M ++PT+ TF + SC+A L GK+ H G V V+++L++MY+K
Sbjct: 133 FLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAK 192
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE-------------- 166
CG+ A+ +FD + R+++ +W +M++ ++Q AL LF +
Sbjct: 193 CGDSVMAKVVFDRM--RLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIIT 250
Query: 167 ------FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
+ + E S ++ D + SVLSAC+ + + H +++ D
Sbjct: 251 GYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVD 310
Query: 221 SEVGVGNTLIDAYARGGHVDVS---------------------------------RKVFD 247
VGN LI YA+ G V+V+ R +FD
Sbjct: 311 IAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFD 370
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ +D V W ++I YAQNGL ++AL +F M++ K N TL+AVL I+ L L
Sbjct: 371 SLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGP-KPNNYTLAAVLSVISSLASLD 429
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM-KEKNVRSWTAMIAGY 366
GK +H I+++ SV VG ++I MY + G + ARK FN + ++ +WT+MI
Sbjct: 430 HGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSL 489
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
H EA++LF KM++ ++P++IT+V VLSAC+H GLV++G + N M + NIEP
Sbjct: 490 AQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPT 549
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
HY CM+DLLGRAG L+EAY+ I M ++ D V WGSLL +CR+HK VDL ++AA+KL
Sbjct: 550 SSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLL 609
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
++PNN G ++ L+N + G+WED + R MK++ + K GFS V+++ KVH F V D
Sbjct: 610 LIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVED 669
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
HPQ + IY + ++ +++++G++ D SV+HD++QE KE LR HSEKLA
Sbjct: 670 ALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALIN 729
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH+ IR IS +V+REI+VRD+ RFH+FKDG CSC DYW
Sbjct: 730 TPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 148/550 (26%), Positives = 241/550 (43%), Gaps = 106/550 (19%)
Query: 69 LTPTRSTFPCAIKSCSAL-------HDLHSGKQAHQQAFIFGF-HRDVFVSSALIDMYSK 120
LTPT + P +C L D G+ H + G + VF+++ L+++Y K
Sbjct: 2 LTPTPNP-PSHSDACVHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVK 60
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG----- 175
G SDA +LFDE+P ++ SW ++L+ + + N A +F E +S
Sbjct: 61 TGSSSDAHRLFDEMP--LKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIV 118
Query: 176 -----GASENSDNVFVDSVA---------IASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
G +++ + F+ V+ +VL++C+ V + H FV+K G
Sbjct: 119 GYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSG 178
Query: 222 EVGVGNTLIDAYARGG-------------------------------HVDVSRKVFDGMI 250
V V N+L++ YA+ G D++ +FD M
Sbjct: 179 VVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMT 238
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+ D V+WNSII Y G AL+ F M+KS+ +K + TL +VL A A+ L+LGK
Sbjct: 239 DPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGK 298
Query: 311 CIHDQVIKMDLEES---------------------------------VIVGTSIIDMYCK 337
IH +++ D++ + VI TS++D Y K
Sbjct: 299 QIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFK 358
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
G +D AR F+ +K ++V +WTAMI GY + +AL LF MI+ G +PN T +V
Sbjct: 359 IGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAV 418
Query: 398 LSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
LS S + G L+ + V ++ + R+G +K+A + +
Sbjct: 419 LSVISSLASLDHGKQ-LHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYR 477
Query: 458 DFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLSNIYANAGRWED 511
D + W S++ + H LG A +LFE L+P++ Y +LS + G E
Sbjct: 478 DTLTWTSMILSLAQH---GLGN-EAIELFEKMLRINLKPDHITYVGVLSAC-THVGLVEQ 532
Query: 512 VERTRSLMKN 521
+ +LMKN
Sbjct: 533 GKSYFNLMKN 542
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 247/642 (38%), Positives = 359/642 (55%), Gaps = 35/642 (5%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
N L +V +W ++IA + G AL FS+MR+ S+ P TFPCA K+
Sbjct: 58 PNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKA 117
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
+L GKQ H A G DVFV + DMYSK G +ARK+FDE+P+R NI
Sbjct: 118 SGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPER--NIA 175
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
+W + L+ V +AL F EF E E + + + L+AC+ +
Sbjct: 176 TWNAYLSNSVLEGRYDDALTAFIEFRHEGWE------------PNLITFCAFLNACAGAS 223
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ HGFV++ GF+++V V N LID Y + V S +F G+ + + V+W S+I
Sbjct: 224 YLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIV 283
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
Y QN +A VF + + ++ +S+VL A A L VL +GK +H +K +
Sbjct: 284 SYVQNDEEEKACLVFLR-ARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVV 342
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
++ VG++++DMY KCG ++ A +AF++M E+N+ +W AMI GY +A A+ LF +M
Sbjct: 343 GNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEM 402
Query: 383 IKAG--VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
V PNY+TFV VLSACS AG V G +M + IEPG EHY C+VDLLGRA
Sbjct: 403 TCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRA 462
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
G +++AY I+ M ++ VWG+LLGA ++ +LG++AA LFEL+P + G HVLLS
Sbjct: 463 GMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLS 522
Query: 501 NIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLE 560
N++A AGRWE+ R MK+ + K G S + VH F D H ++ +I L
Sbjct: 523 NMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLA 582
Query: 561 ELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLR 602
+L +++ GY+ D + + D+++EEK M + HSEK+A NLR
Sbjct: 583 KLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLR 642
Query: 603 VCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+CGDCH+ I+ IS +V REI+VRD+ FH F+D CSC DYW
Sbjct: 643 ICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 185/411 (45%), Gaps = 24/411 (5%)
Query: 92 GKQAHQQAF-IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G+ AH Q F+ + L++MYSK + A+ L P R++V+WT+++ G
Sbjct: 25 GRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPN--RSVVTWTALIAG 82
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
VQN AL F D++ + A + V +
Sbjct: 83 SVQNGRFTSALFHFSNM------------RRDSIQPNDFTFPCAFKASGSLRSPLVGKQV 130
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +K G S+V VG + D Y++ G + +RK+FD M E++ TWN+ ++ G
Sbjct: 131 HALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRY 190
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+AL F + + + N +T A L A A LRLG+ +H V++ E V V
Sbjct: 191 DDALTAFIEF-RHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANG 249
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+ID Y KC QV + F+ + + N SW +MI Y + +A +F + K G+ P
Sbjct: 250 LIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPT 309
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
SVLSAC+ +++ G ++T+ + + + +VD+ G+ G +++A
Sbjct: 310 DFMVSSVLSACAGLSVLEVG-KSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAF 368
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSN 501
+ M + + V W +++G D+ A LF + CG H + N
Sbjct: 369 DEMPER-NLVTWNAMIGGYAHQGQADM----AVTLF--DEMTCGSHRVAPN 412
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 134/288 (46%), Gaps = 14/288 (4%)
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG--VGNTLIDAYARGGHVDVS 242
F+ ++AS++ + + + AH +IK D+ + + N L++ Y++ + +
Sbjct: 3 FLSPNSLASLVESAVSTQCSRLGRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSA 61
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
+ + + VTW ++IA QNG AL F M + + ++ N T A
Sbjct: 62 QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDS-IQPNDFTFPCAFKASGS 120
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
L +GK +H +K V VG S DMY K G + ARK F++M E+N+ +W A
Sbjct: 121 LRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAY 180
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
++ + R +AL F + G PN ITF + L+AC+ A ++ G H F
Sbjct: 181 LSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQL-----HGFV 235
Query: 423 IEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
++ G E ++D G+ ++ + + G+ K + V W S++
Sbjct: 236 LQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGIS-KPNDVSWCSMI 282
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/725 (34%), Positives = 397/725 (54%), Gaps = 94/725 (12%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M L + S ++++S K L + D + V SW ++I + G A+
Sbjct: 71 MPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPV-SWTAIIVGYNQFGLFDNAIWM 129
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F+ M + P++ T + SC+A L G++ H G V V+++L++MY+K
Sbjct: 130 FAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAK 189
Query: 121 CGELSDARKLFDEIPQRI-----------------------------RNIVSWTSMLTGY 151
CG+ A+ +FD + + R+IVSW SM++GY
Sbjct: 190 CGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGY 249
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
Q EAL++F + L N ++ D+ +AS+LSAC+ + + + H
Sbjct: 250 SQQGYNLEALVIFSKML-----------NEPSLKPDNFTLASILSACANLEKLNIGKQIH 298
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR---------------------------- 243
++++ ++ VGN LI YA+ G V+++R
Sbjct: 299 AYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGN 358
Query: 244 -----KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
++F+ + ++D V W ++I Y QNGL +AL++F MV + N+ TL+A+L
Sbjct: 359 VKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGP-EPNSYTLAAMLS 417
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVR 357
+ L +L GK IH IK + V ++I MY K G +++A++ F+ +K +
Sbjct: 418 VSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIV 477
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SWT+MI H +EA++LF +M+ G++P++IT+V VLSAC+H GLV++G + N M
Sbjct: 478 SWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMM 537
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
IEP + HY CM+DL GRAG L+EAY IE M ++ D + WGSLL +C+IHKN DL
Sbjct: 538 TEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADL 597
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG 537
++AA++L ++P N G ++ L+N+Y+ G+WE+ +TR LMK+R + K G S + ++
Sbjct: 598 AKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKN 657
Query: 538 KVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
+VHAF V D HPQ ++IY+ + E+ +++++G++ D SV+HD+++E KE L+ HSEK
Sbjct: 658 EVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEK 717
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA NLRVC DCH+ I+ ISK+V REI+VRD+ RFH+FKDG CS
Sbjct: 718 LAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCS 777
Query: 640 CGDYW 644
C DYW
Sbjct: 778 CRDYW 782
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 124/291 (42%), Gaps = 70/291 (24%)
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
G S S F A +L R+ H +IK+G V + N L+ YA+
Sbjct: 4 GNSPTSSEFF------AHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAK 57
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYA------------------------------ 265
G + + VFD M K +WN++I+ YA
Sbjct: 58 TGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGY 117
Query: 266 -QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
Q GL A+ +F +M+ S V + T+S VL + A L +G+ IH V+K+ L
Sbjct: 118 NQFGLFDNAIWMFAKMI-SERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSC 176
Query: 325 VIVGTSIIDMYCKC-------------------------------GQVDLARKAFNQMKE 353
V V TS+++MY KC GQ +LA F +M +
Sbjct: 177 VPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPD 236
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMI-KAGVRPNYITFVSVLSACSH 403
+++ SW +MI+GY EAL +F KM+ + ++P+ T S+LSAC++
Sbjct: 237 RDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACAN 287
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 249/669 (37%), Positives = 376/669 (56%), Gaps = 64/669 (9%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVD---KNNVFSWNSVIADLARGGDSVEA 57
M + S S + ++S+ N L +L Y D + + SWN ++A R G EA
Sbjct: 195 MPVKDSVSYNVMISS----HANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEA 250
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM 117
F S + + ++ S + Q+ F RDV + ++
Sbjct: 251 RELFDSRTEWDAISWNALMAGYVQ--------RSQIEEAQKMFNKMPQRDVVSWNTMVSG 302
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
Y++ G++++AR+LFD P IR++ +WT++++GY QN EA +F
Sbjct: 303 YARRGDMAEARRLFDVAP--IRDVFTWTAIVSGYAQNGMLEEAKRVF------------- 347
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS----EVGVGNTLIDAY 233
+ D A++ + V + E K FD+ V NT++ Y
Sbjct: 348 -----DAMPDKNAVSWNAMMAAYVQRRMMEEA------KELFDAMPCRNVASWNTMLTGY 396
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
A+ G +D +R +F M +KDAV+W +++A Y+Q G + E L +F +M + + N
Sbjct: 397 AQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEW-VNRSAF 455
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
+ VL A + L G +H ++IK VG +++ MY KCG ++ A AF +M+E
Sbjct: 456 ACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEE 515
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
++V SW MIAGY H +EAL++F M K +P+ IT V VL+ACSH+GLV++G +
Sbjct: 516 RDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISY 575
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
+M +F + EHY CM+DLLGRAG+L EA +L++ M + D +WG+LLGA RIH+
Sbjct: 576 FYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHR 635
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
N +LG AA+K+FELEP N G +VLLSNIYA++G+W DV++ R +M R + K PGFS +
Sbjct: 636 NSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWI 695
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
E++ KVH F VGD HP+ E IY +LE+L++++++ GYV+ V+HDV++EEKE L+
Sbjct: 696 EVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKY 755
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSEKLA NLRVC DCHT + IS + R I++RDS RFH+F+D
Sbjct: 756 HSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRD 815
Query: 636 GLCSCGDYW 644
G CSCGDYW
Sbjct: 816 GSCSCGDYW 824
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 167/367 (45%), Gaps = 51/367 (13%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
+V + I + + G + DA +LF +P+R + ++ +ML GY N +AL F+
Sbjct: 106 EVIRRNRAITAHMRAGRVPDAERLFAAMPRR--STSTYNTMLAGYAANGRLPQALSFFRS 163
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVG 226
+S S N + ++ ++S L+ R E+ V
Sbjct: 164 IPRPDS-------FSYNTLLHALGVSSSLADV------------------RALFDEMPVK 198
Query: 227 -----NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
N +I ++A G V ++R FD EKDAV+WN ++A Y +NG EA ++FD
Sbjct: 199 DSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFD--- 255
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ + +A++ +A++ + + + +++ + D V+ +++ Y + G +
Sbjct: 256 --SRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRD----VVSWNTMVSGYARRGDM 309
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
AR+ F+ ++V +WTA+++GY + EA +F M N +++ ++++A
Sbjct: 310 AEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDK----NAVSWNAMMAAY 365
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+++E + M V + M+ +AG L EA + GM + D V
Sbjct: 366 VQRRMMEEAKELFDAMPCR-----NVASWNTMLTGYAQAGMLDEARAIF-GMMPQKDAVS 419
Query: 462 WGSLLGA 468
W ++L A
Sbjct: 420 WAAMLAA 426
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 148/333 (44%), Gaps = 51/333 (15%)
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
D EV N I A+ R G V + ++F M + T+N+++A YA NG +AL F
Sbjct: 104 DMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRS 163
Query: 280 MVKS------------------TDVKC--------NAVTLSAVLLAIAHLGVLRLGKCIH 313
+ + DV+ ++V+ + ++ + A+ G++ L +
Sbjct: 164 IPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYF 223
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
D + E+ + ++ Y + G++ AR+ F+ E + SW A++AGY +
Sbjct: 224 D----LAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIE 279
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP--GVEHYG 431
EA +F KM + V +++ +++S + G + E F++ P V +
Sbjct: 280 EAQKMFNKMPQRDV----VSWNTMVSGYARRGDMAEA-------RRLFDVAPIRDVFTWT 328
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP- 490
+V + G L+EA + + M K + V W +++ A + ++ AK+LF+ P
Sbjct: 329 AIVSGYAQNGMLEEAKRVFDAMPDK-NAVSWNAMMAAYVQRRMME----EAKELFDAMPC 383
Query: 491 -NNCGYHVLLSNIYANAGRWEDVERTRSLMKNR 522
N ++ +L+ YA AG ++ +M +
Sbjct: 384 RNVASWNTMLTG-YAQAGMLDEARAIFGMMPQK 415
>gi|356537109|ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Glycine max]
Length = 630
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/627 (40%), Positives = 378/627 (60%), Gaps = 31/627 (4%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
N +WN+ + L++ EAL + M + S P TFP +KSC+ L + Q
Sbjct: 17 NPTTAWNNQLRQLSKQRQYREALTLYRHMLRSSFFPNTFTFPFLLKSCAFLSLPLAASQL 76
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H G D + S+LI+ Y+KC ARK+FDE+P + + +M++GY N
Sbjct: 77 HAHVIRTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEMPN---PTICYNAMISGYSFNS 133
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
A+ LF++ EE + N V++V + S++S CS T + HG +
Sbjct: 134 KPLHAVCLFRKMRREEEDGLDVDVN-----VNAVTLLSLVSGCSVATHLTIGVCLHGCCV 188
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+ GF +++ V N+L+ Y + G V+++RKVFD M+ +D +TWN++I+ YAQNG A L+
Sbjct: 189 RFGFVTDLAVANSLVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLE 248
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
V+ +M K + V +AVTL V+ A A+LG +G+ + ++ + + + ++++MY
Sbjct: 249 VYSEM-KLSGVSADAVTLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRNALVNMY 307
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
+CG + AR+ F++ EK+V SWTA+I GYG+H AL+LF +M+++ VRP+ FV
Sbjct: 308 ARCGNLTRAREVFDRSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFV 367
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
SVLSACSHAGL G + M ++ ++PG EHY C+VDLLGRAG+L+EA +LI+ MKV
Sbjct: 368 SVLSACSHAGLTDRGLEYFKEMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNLIKSMKV 427
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
K D VWG+LLGAC+IHKN ++ E+A + + ELEP N GY+VLLSNIY +A E V R
Sbjct: 428 KPDGAVWGALLGACKIHKNAEIAELAFQHVVELEPTNIGYYVLLSNIYTDANNLEGVSRV 487
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
R +M+ R+L K PG+S VE +GK++ F GD HPQ ++IY L+EL ++EV +
Sbjct: 488 RVMMRERKLRKDPGYSYVEYKGKMNLFYSGDLSHPQTKQIYRMLDELESLVKEVHPPNEK 547
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
EE + +HSEKLA NLRVC DCH I+L+SK+
Sbjct: 548 C----QGRSEELLIGTGVHSEKLAIAFALLNTKSGTEITVMKNLRVCVDCHLFIKLVSKI 603
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
V+R+ +VRD+ RFH+F+DG+CSC DYW
Sbjct: 604 VNRQFIVRDATRFHHFRDGICSCKDYW 630
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 158/330 (47%), Gaps = 34/330 (10%)
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
P R +W + L + REAL L++ L + F ++ +
Sbjct: 13 PPRWNPTTAWNNQLRQLSKQRQYREALTLYRHML------------RSSFFPNTFTFPFL 60
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
L +C+ +++ H VI+ G + ++LI+ YA+ +RKVFD M
Sbjct: 61 LKSCAFLSLPLAASQLHAHVIRTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEM-PNPT 119
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKS------TDVKCNAVTLSAVLLAIAHLGVLRL 308
+ +N++I+ Y+ N A+ +F +M + DV NAVTL +++ + L +
Sbjct: 120 ICYNAMISGYSFNSKPLHAVCLFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTI 179
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
G C+H ++ + V S++ MY KCG+V+LARK F++M +++ +W AMI+GY
Sbjct: 180 GVCLHGCCVRFGFVTDLAVANSLVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQ 239
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
+ AR L+++ +M +GV + +T + V+SAC++ G +G E E
Sbjct: 240 NGHARCVLEVYSEMKLSGVSADAVTLLGVMSACANLG--------AQGIGREVEREIERR 291
Query: 429 HYGC-------MVDLLGRAGKLKEAYDLIE 451
+GC +V++ R G L A ++ +
Sbjct: 292 GFGCNPFLRNALVNMYARCGNLTRAREVFD 321
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 263/663 (39%), Positives = 380/663 (57%), Gaps = 45/663 (6%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S +++++ K S LF++ + + ++ S+N++I+ A G++ AL FS MR++
Sbjct: 76 SFNAIIAAYAKESRPLIAHQLFDQ-IPEPDLVSYNTLISAYADCGETAPALGLFSGMREM 134
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
L T I +C D+ Q H A GF V V++AL+ Y K G+L DA
Sbjct: 135 GLDMDGFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDA 192
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
+++F + IR+ VSW SM+ Y Q+ +AL LF+E + + VD
Sbjct: 193 KRVFYGMGG-IRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRR------------GLNVD 239
Query: 188 SVAIASVLSA--CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR-GGHVDVSRK 244
+ASVL+A C G+ HG +IK GF VG+ LID Y++ GG + RK
Sbjct: 240 MFTLASVLTAFTCLEDLSGGLQ--FHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRK 297
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNG-LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VF+ + E D V WN++++ Y+QN +AL+ F QM + + N + V+ A ++L
Sbjct: 298 VFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQM-QGIGYRPNDCSFVCVISACSNL 356
Query: 304 GVLRLGKCIHDQVIKMDLEESVI-VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
GK IH +K D+ + I V ++I MY KCG + AR+ F++M E N S +M
Sbjct: 357 SSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSM 416
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
IAGY H E+L LF M++ + P ITF+SVLSAC+H G V+EGW++ N M +FN
Sbjct: 417 IAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFN 476
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
IEP EHY CM+DLLGRAGKL EA +LI M + W SLLGACR H N++L AA
Sbjct: 477 IEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAA 536
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
++ +LEP+N +V+LSN+YA+AGRWE+V R M++R + K PG S +E++ ++H F
Sbjct: 537 NQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVF 596
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQE---EKEMTLRIHSEKLA 599
+ D HP ++IYE+LEE++ K++ GYV D+ + D EKE+ L HSEKLA
Sbjct: 597 VAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLA 656
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLR+CGDCH I+ IS + REI VRD+ RFH FK+G CSCG
Sbjct: 657 VAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCG 716
Query: 642 DYW 644
DYW
Sbjct: 717 DYW 719
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 182/369 (49%), Gaps = 29/369 (7%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M ++S T R F +K+C A DL +GK H + S+ I +YSKCG
Sbjct: 1 MNQISWTLQR--FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGR 58
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE-----------FLLEES 172
L+ ARK F +I N+ S+ +++ Y + A LF + + +
Sbjct: 59 LAWARKAFQDISD--PNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYA 116
Query: 173 ECGGASE--------NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
+CG + + +D +++V++AC G+ H + GFDS V
Sbjct: 117 DCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDV--GLIGQLHSVAVSSGFDSYVS 174
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
V N L+ Y + G +D +++VF GM +D V+WNS+I Y Q+ ++AL +F +MV+
Sbjct: 175 VNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVR- 233
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC-GQVD 342
+ + TL++VL A L L G H Q+IK ++ VG+ +ID+Y KC G +
Sbjct: 234 RGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMS 293
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRARE-ALDLFYKMIKAGVRPNYITFVSVLSAC 401
RK F ++ E ++ W M++GY + E AL+ F +M G RPN +FV V+SAC
Sbjct: 294 DCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISAC 353
Query: 402 SHAGLVQEG 410
S+ +G
Sbjct: 354 SNLSSPSQG 362
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 143/299 (47%), Gaps = 36/299 (12%)
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
D V N +I AYA+ ++ ++FD + E D V++N++I+ YA G A AL +F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M + + + TLSAV+ A V +G+ +H + + V V +++ Y K G
Sbjct: 131 M-REMGLDMDGFTLSAVITACCD-DVGLIGQ-LHSVAVSSGFDSYVSVNNALLTYYGKNG 187
Query: 340 QVDLARKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
+D A++ F M ++ SW +MI YG H +AL LF +M++ G+ + T SVL
Sbjct: 188 DLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVL 247
Query: 399 SACS-----------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR-AGKLKEA 446
+A + H L++ G+H + +G ++DL + G + +
Sbjct: 248 TAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSG------------LIDLYSKCGGGMSDC 295
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE-----PNNCGYHVLLS 500
+ E + + D V+W +++ +N + E A + +++ PN+C + ++S
Sbjct: 296 RKVFEEI-TEPDLVLWNTMVSG--YSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVIS 351
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/659 (36%), Positives = 384/659 (58%), Gaps = 58/659 (8%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S ++++S ++ + +F++ +KN+V SWN++++ + EA F S
Sbjct: 154 SWNTILSGYAQNGCVDDARRVFDRMPEKNDV-SWNALLSAYVQNSKLEEACVLFGSRENW 212
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
+L ++ C + + +Q + RDV + +I Y++ GE+ +A
Sbjct: 213 ALV----SWNCLLGGFVKKKKIVEARQFFDSMKV----RDVVSWNTIITGYAQNGEIDEA 264
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R+LFDE P + ++ +WT+M++GY+QN EA LF + E +E
Sbjct: 265 RQLFDESP--VHDVFTWTAMVSGYIQNRMVEEARELFDR-MPERNE-------------- 307
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD----SEVGVGNTLIDAYARGGHVDVSR 243
V+ ++L+ G +G + K FD V NT+I YA+ G + ++
Sbjct: 308 -VSWNAMLA--------GYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAK 358
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+FD M ++D V+W ++IA Y+Q+G + EAL +F M + + N + S+ L A +
Sbjct: 359 NLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGG-RLNRSSFSSALSTCADV 417
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L LGK +H +++K E VG +++ MYCKCG ++ A F +M K++ SW MI
Sbjct: 418 VALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI 477
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
AGY H EAL F M + G++P+ T V+VLSACSH GLV +G + +TM ++ +
Sbjct: 478 AGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGV 537
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
P +HY CMVDLLGRAG L+EA++L++ M + D +WG+LLGA R+H N +L E AA
Sbjct: 538 RPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAAD 597
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
K+F +EP N G +VLLSN+YA++GRW DV + R M+++ + K PG+S +E++ K H F
Sbjct: 598 KIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFS 657
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
VGD+ HP+ ++I+ +LE+L++++++ GYV+ + V+HDV++EEKE +R HSE+LA
Sbjct: 658 VGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYG 717
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH I+ ++KV R I++RD+ RFH+FKDG CSCGDYW
Sbjct: 718 IMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 148/540 (27%), Positives = 233/540 (43%), Gaps = 119/540 (22%)
Query: 18 KHSTNTNLTTLFNKYVDKN---NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS 74
K ST T + K + K+ ++ WN I+ R G EALR F M + S
Sbjct: 36 KSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSY-- 93
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
+A+I Y + GE AR LFDE+
Sbjct: 94 -------------------------------------NAMISGYLRNGEFELARMLFDEM 116
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESEC-----------GGASENSDN 183
P+R ++VSW M+ GYV+N N +A LF E + E C G +++
Sbjct: 117 PER--DLVSWNVMIKGYVRNRNLGKARELF-ERMPERDVCSWNTILSGYAQNGCVDDARR 173
Query: 184 VF-----VDSVAIASVLSAC---SRVTVNGVTEGAH-------------GFVIKRG---- 218
VF + V+ ++LSA S++ V G+ GFV K+
Sbjct: 174 VFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEA 233
Query: 219 ---FDS----EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
FDS +V NT+I YA+ G +D +R++FD D TW ++++ Y QN +
Sbjct: 234 RQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVE 293
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA ++FD+M + N V+ +A+L + + K + D + +V ++
Sbjct: 294 EARELFDRMPER-----NEVSWNAMLAGYVQGERVEMAKELFDVMPC----RNVSTWNTM 344
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
I Y +CG++ A+ F++M +++ SW AMIAGY + EAL LF M + G R N
Sbjct: 345 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNR 404
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD-----LLGRAGKLKEA 446
+F S LS C+ ++ L H ++ G E GC V + + G ++EA
Sbjct: 405 SSFSSALSTCADVVALE-----LGKQLHGRLVKGGYET-GCFVGNALLLMYCKCGSIEEA 458
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLS 500
DL + M K D V W +++ H GE A + FE L+P++ +LS
Sbjct: 459 NDLFKEMAGK-DIVSWNTMIAGYSRH---GFGE-EALRFFESMKREGLKPDDATMVAVLS 513
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/638 (37%), Positives = 364/638 (57%), Gaps = 56/638 (8%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ LF+K D++ V SWNS+I+ G + L + M L + +T + C+
Sbjct: 67 SELFDKLCDRD-VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAK 125
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L GK H A F R + S+ L+DMYSKCG+L A ++F+++ + RN+VSWT
Sbjct: 126 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE--RNVVSWT 183
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
SM+ GY ++ + A++L ++ + V +D VAI S+L AC+R
Sbjct: 184 SMIAGYTRDGWSDGAIILLQQM------------EKEGVKLDVVAITSILHACARSGSLD 231
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H ++ S + V N L+D YA+ G ++ + VF M+ KD ++WN+++
Sbjct: 232 NGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG--- 288
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
++K ++ T++ +L A A L L GK IH +++
Sbjct: 289 -------------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDR 329
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V +++D+Y KCG + LAR F+ + K++ SWT MIAGYGMH EA+ F +M A
Sbjct: 330 HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDA 389
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ P+ ++F+S+L ACSH+GL+++GW + M ++FNIEP +EHY CMVDLL R G L +
Sbjct: 390 GIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSK 449
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
AY IE + + D +WG+LL CRI+ +++L E A+++FELEP N GY+VLL+NIYA
Sbjct: 450 AYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAE 509
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK-EHPQHEKIYEYLEELNV 564
A +WE+V+R R + + L K PG S +E++G+V+ F+ G+ HP +KI L+++
Sbjct: 510 AEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRR 569
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
K++E GY + + D+ +KEM L HSEKLA NLRVCGD
Sbjct: 570 KMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGD 629
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH + + +SK REIV+RDS RFH+FKDG CSC +W
Sbjct: 630 CHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 212/497 (42%), Gaps = 103/497 (20%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++K NV+ WN ++++ A+ GD E++ F M + + RS
Sbjct: 22 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRS------------------ 63
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
A +LFD++ R +++SW SM++GYV
Sbjct: 64 --------------------------------ESASELFDKLCDR--DVISWNSMISGYV 89
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N L ++K+ + + VD I SVL C++ + + H
Sbjct: 90 SNGLTERGLGIYKQMMYL------------GIDVDLATIISVLVGCAKSGTLSLGKAVHS 137
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
IK F+ + NTL+D Y++ G +D + +VF+ M E++ V+W S+IA Y ++G +
Sbjct: 138 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDG 197
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+ + QM K VK + V ++++L A A G L GK +HD + ++ ++ V +++
Sbjct: 198 AIILLQQMEKE-GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALM 256
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG ++ A F+ M K++ SW M+ ++P+
Sbjct: 257 DMYAKCGSMEGANSVFSTMVVKDIISWNTMV---------------------GELKPDSR 295
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYD 448
T +L AC+ ++ G H + + G +VDL + G L A
Sbjct: 296 TMACILPACASLSALERGKEI-----HGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 350
Query: 449 LIEGMKVKADFVVWGSLLGACRIH--KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA-- 504
L + + K D V W ++ +H N + + +EP+ + +S +YA
Sbjct: 351 LFDMIPSK-DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF---ISILYACS 406
Query: 505 NAGRWEDVERTRSLMKN 521
++G E R +MKN
Sbjct: 407 HSGLLEQGWRFFYIMKN 423
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 62/294 (21%)
Query: 229 LIDAYARGGHVDVSRKVFDGM--------------------------------------- 249
L+ YA G + R+VFD M
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 250 ------------IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
++D ++WNS+I+ Y NGL L ++ QM+ + + T+ +VL
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMM-YLGIDVDLATIISVL 120
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
+ A G L LGK +H IK E + +++DMY KCG +D A + F +M E+NV
Sbjct: 121 VGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 180
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SWT+MIAGY + A+ L +M K GV+ + + S+L AC+ +G + G
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNG-----KD 235
Query: 418 GHEF----NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
H++ N+ + ++D+ + G ++ A + M VK D + W +++G
Sbjct: 236 VHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTMVG 288
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 12/132 (9%)
Query: 25 LTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCS 84
L L + ++ SW +IA G EA+ F+ MR + P +F + +CS
Sbjct: 347 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 406
Query: 85 ALHDLHSGKQAHQQAFIFGFHRDVFVSSAL------IDMYSKCGELSDARKLFDEIPQRI 138
HSG F + D + L +D+ S+ G LS A K + +P
Sbjct: 407 -----HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAP 461
Query: 139 RNIVSWTSMLTG 150
+ W ++L G
Sbjct: 462 DATI-WGALLCG 472
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/597 (40%), Positives = 352/597 (58%), Gaps = 42/597 (7%)
Query: 71 PTRSTFPCAIKSCSAL-HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P+ TFP A+KS S L H L +G+Q H ++ H + V ++L+ +Y++CG L A++
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FDE+P + VSWT+++T Y+ + REA+ + + ++ + DS
Sbjct: 175 VFDEMPHP--STVSWTALITAYMDAGDLREAVHVARNAF------------ANGMRPDSF 220
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
VL+AC+RV E + G V V +D Y + G + +R+VFD M
Sbjct: 221 TAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKM 280
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+KDAV W +++ YA NG EALD+F M ++ V+ + ++ L A LG L LG
Sbjct: 281 RDKDAVAWGAMVGGYASNGHPREALDLFLAM-QAEGVRPDCYAVAGALSACTRLGALDLG 339
Query: 310 KCIHDQVIKM----DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
+ Q I+M + ++ ++GT++IDMY KCG A F QM++K++ W AMI G
Sbjct: 340 R----QAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILG 395
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
GM + A L +M K+GV+ N TF+ +L +C+H GL+Q+G + + M ++I P
Sbjct: 396 LGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 455
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
+EHYGC+VDLL RAG L+EA+ LI+ M + A+ V+ G+LLG C+IH+N +L E +L
Sbjct: 456 RIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQL 515
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
LEP N G +V+LSNIY+N GRWED + R MK + + K P S VE GKVH F VG
Sbjct: 516 IRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVG 575
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
DK HP ++IY+ L+EL ++++ +GY V+ DV+ EEKE TL HSEKLA
Sbjct: 576 DKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLL 635
Query: 600 ------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT I+LIS++ REI+VRD+ RFH F+DG CSC DYW
Sbjct: 636 VTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 176/374 (47%), Gaps = 33/374 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALR----AFSS-MRKLSLTPTRSTFPCAIKSCSALHDLHS 91
+ SW ++I GD EA+ AF++ MR S T R + +C+ + DL +
Sbjct: 183 STVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVR-----VLTACARVADLAT 237
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ + A G + VFV++A +D+Y KCGE++ AR++FD++ R ++ V+W +M+ GY
Sbjct: 238 GETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKM--RDKDAVAWGAMVGGY 295
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
N + REAL LF + ++ V D A+A LSAC+R+ + A
Sbjct: 296 ASNGHPREALDLF------------LAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAI 343
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
V F +G LID YA+ G + VF M +KD + WN++I G
Sbjct: 344 RMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEK 403
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTS 330
A + QM KS VK N T +L + H G+++ G + H+ + +
Sbjct: 404 TAFTLIGQMEKS-GVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC 462
Query: 331 IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
I+D+ + G + A + + M N A++ G +H A A + ++I+ + P
Sbjct: 463 IVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIR--LEP 520
Query: 390 ----NYITFVSVLS 399
NY+ ++ S
Sbjct: 521 WNSGNYVMLSNIYS 534
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 2/152 (1%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K ++ WN++I L G A M K + +TF + SC+ + G++
Sbjct: 383 KKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR 442
Query: 95 A-HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H ++ + ++D+ S+ G L +A +L D++P N V ++L G
Sbjct: 443 YFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPA-NAVILGALLGGCKI 501
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVF 185
+ NA A + + + E G N++
Sbjct: 502 HRNAELAEHVLTQLIRLEPWNSGNYVMLSNIY 533
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/608 (39%), Positives = 359/608 (59%), Gaps = 34/608 (5%)
Query: 55 VEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSAL 114
V LRA S M + + AI +C L G+Q H + + VF+ + L
Sbjct: 24 VAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRL 83
Query: 115 IDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESEC 174
+ MY +CG L DAR + D +P+R ++VSWT+M++GY Q + EAL LF + L + C
Sbjct: 84 VTMYVRCGALDDARNVLDRMPER--SVVSWTTMISGYSQTERHVEALDLFIKML--RAGC 139
Query: 175 GGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYA 234
+ +A+VL++CS + H ++K F+S + VG++L+D YA
Sbjct: 140 ----------IPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYA 189
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
+ ++ +R+VFD + E+D V+ +II+ YAQ GL EALD+F Q+ S ++CN VT +
Sbjct: 190 KSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLY-SEGMQCNHVTFT 248
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
++ A++ L L GK +H +++ +L V + S+IDMY KCG++ +R+ F+ M E+
Sbjct: 249 TLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLER 308
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
+V SW AM+ GYG H E + LF + K V+P+ +T ++VLS CSH GLV EG
Sbjct: 309 SVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIF 367
Query: 415 NTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
+T+ E + HYGC++DLLGR+G+L++A +LIE M ++ +WGSLLGACR+H N
Sbjct: 368 DTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHAN 427
Query: 475 VDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVE 534
V +GE+ A+KL E+EP N G +V+LSNIYA AG W+DV + R LM + + K PG S +
Sbjct: 428 VHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWII 487
Query: 535 LRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIH 594
L +H F ++ HP + I ++E+ V ++ G+V D++ V+HDVD E+KE L H
Sbjct: 488 LDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGH 547
Query: 595 SEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDG 636
SEKLA NLR+C DCH + +SKV +REI +RD RFH G
Sbjct: 548 SEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHG 607
Query: 637 LCSCGDYW 644
C+CGDYW
Sbjct: 608 NCTCGDYW 615
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 181/342 (52%), Gaps = 24/342 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +V SW ++I+ ++ VEAL F M + P T + SCS ++ G
Sbjct: 103 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 162
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H F +FV S+L+DMY+K + +AR++FD +P+ R++VS T++++GY
Sbjct: 163 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPE--RDVVSCTAIISGYA 220
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q EAL LF++ E +C + V ++++A S + + H
Sbjct: 221 QKGLDEEALDLFRQLYSEGMQC------------NHVTFTTLVTALSGLASLDYGKQVHA 268
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++++ V + N+LID Y++ G + SR+VFD M+E+ V+WN+++ Y ++GL E
Sbjct: 269 LILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHE 328
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS-- 330
+ +F + K +VK ++VTL AVL +H G++ G I D V+K E+S ++ T
Sbjct: 329 VISLFKDLHK--EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHTGHY 383
Query: 331 --IIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
IID+ + G+++ A M ++ S W +++ +H
Sbjct: 384 GCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVH 425
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/638 (36%), Positives = 363/638 (56%), Gaps = 56/638 (8%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ LF+K D++ V SWNS+I+ G + L + M L + +T + C+
Sbjct: 205 SELFDKLCDRD-VISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCAN 263
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L GK H A F R + S+ L+DMYSKCG+L A ++F+++ +R N+VSWT
Sbjct: 264 SGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER--NVVSWT 321
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
SM+ GY ++ + A+ L ++ + V +D VA S+L AC+R
Sbjct: 322 SMIAGYTRDGRSDGAIRLLQQM------------EKEGVKLDVVATTSILHACARSGSLD 369
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H ++ +S + V N L+D Y + G +D + VF M+ KD ++WN++I
Sbjct: 370 NGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG--- 426
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
++K ++ T++ +L A A L L GK IH +++
Sbjct: 427 -------------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDR 467
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V +++D+Y KCG + LAR F+ + K++ SWT MI+GYGMH EA+ F +M A
Sbjct: 468 HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDA 527
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ P+ ++F+S+L ACSH+GL+++GW + M ++FNIEP +EHY CMVDLL R G L +
Sbjct: 528 GIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSK 587
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
AY+ IE + + D +WG+LL CRI+ +++L E A+++FELEP N GY+VLL+NIYA
Sbjct: 588 AYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAE 647
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK-EHPQHEKIYEYLEELNV 564
A +WE+V+R R + + L K PG S +E++GKV+ F+ G+ HP +KI L+++
Sbjct: 648 AEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRR 707
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
K++E GY + + D+ +KEM L HSEKLA NLRVCGD
Sbjct: 708 KMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGD 767
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH + + +SK REIV+RDS RFH+FK+G CSC +W
Sbjct: 768 CHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 146/636 (22%), Positives = 270/636 (42%), Gaps = 96/636 (15%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
+ K +S ++ S + ++ + +D+ V +N+ I + G+ A+
Sbjct: 32 IHKPTSKATFFSPIFSSCLPIRISATPTRTIDRQ-VTDYNAKILHFCQLGNLENAMELVC 90
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
+K L T+ ++ C+ L GK+ H D + L+ +Y+ CG
Sbjct: 91 MCQKSELET--KTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCG 148
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+L + R++FD + + +N+ W M++ Y + + +E++ LFK ++E+ G E++
Sbjct: 149 DLKEGRRVFDTMEK--KNVYLWNFMVSEYAKIGDFKESICLFK-IMVEKGIEGKRPESAS 205
Query: 183 NVF----------------------------------------VDSVAIASVLSACSRVT 202
+F VD I SVL C+
Sbjct: 206 ELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSG 265
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ + H IK F+ + NTL+D Y++ G +D + +VF+ M E++ V+W S+IA
Sbjct: 266 TLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA 325
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
Y ++G + A+ + QM K VK + V +++L A A G L GK +HD + ++E
Sbjct: 326 GYTRDGRSDGAIRLLQQMEKE-GVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNME 384
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
++ V +++DMY KCG +D A F+ M K++ SW MI
Sbjct: 385 SNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI------------------- 425
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLG 438
++P+ T +L AC+ ++ G H + + G +VDL
Sbjct: 426 --GELKPDSRTMACILPACASLSALERGKEI-----HGYILRNGYSSDRHVANALVDLYV 478
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH--KNVDLGEIAAKKLFELEPNNCGYH 496
+ G L A L + + K D V W ++ +H N + + +EP+ +
Sbjct: 479 KCGVLGLARLLFDMIPSK-DLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSF- 536
Query: 497 VLLSNIYA--NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQH-E 553
+S +YA ++G E R +MKN F+ +E + + +A +V +
Sbjct: 537 --ISILYACSHSGLLEQGWRFFYIMKN-------DFN-IEPKLEHYACMVDLLSRTGNLS 586
Query: 554 KIYEYLEELNVKLQEV--GYVTDMTSVIHDVDQEEK 587
K YE++E L + G + + HD++ EK
Sbjct: 587 KAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEK 622
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/725 (34%), Positives = 396/725 (54%), Gaps = 94/725 (12%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M L + S ++++S K L + D + V SW ++I + G A+
Sbjct: 71 MPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPV-SWTAIIVGYNQFGLFDNAIWM 129
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F+ M + P++ T + SC+A L G++ H G V V+++L++MY+K
Sbjct: 130 FAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAK 189
Query: 121 CGELSDARKLFDEIPQRI-----------------------------RNIVSWTSMLTGY 151
CG+ A+ +FD + + R+IVSW SM++GY
Sbjct: 190 CGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGY 249
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
Q EAL +F + L N ++ D+ +AS+LSAC+ + + + H
Sbjct: 250 SQQGYNLEALAIFSKML-----------NEPSLKPDNFTLASILSACANLEKLNIGKQIH 298
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR---------------------------- 243
++++ ++ VGN LI YA+ G V+++R
Sbjct: 299 AYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGN 358
Query: 244 -----KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
++F+ + ++D V W ++I Y QNGL +AL++F MV + N+ TL+A+L
Sbjct: 359 VKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGP-EPNSYTLAAMLS 417
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVR 357
+ L +L GK IH IK + V ++I MY K G +++A++ F+ +K +
Sbjct: 418 VSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIV 477
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SWT+MI H +EA++LF +M+ G++P++IT+V VLSAC+H GLV++G + N M
Sbjct: 478 SWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMM 537
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
IEP + HY CM+DL GRAG L+EAY IE M ++ D + WGSLL +C+IHKN DL
Sbjct: 538 TEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADL 597
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG 537
++AA++L ++P N G ++ L+N+Y+ G+WE+ +TR LMK+R + K G S + ++
Sbjct: 598 AKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKN 657
Query: 538 KVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
+VHAF V D HPQ ++IY+ + E+ +++++G++ D SV+HD+++E KE L+ HSEK
Sbjct: 658 EVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEK 717
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA NLRVC DCH+ I+ ISK+V REI+VRD+ RFH+FKDG CS
Sbjct: 718 LAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCS 777
Query: 640 CGDYW 644
C DYW
Sbjct: 778 CRDYW 782
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 124/291 (42%), Gaps = 70/291 (24%)
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
G S S F A +L R+ H +IK+G V + N L+ YA+
Sbjct: 4 GNSPTSSEFF------AHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAK 57
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYA------------------------------ 265
G + + VFD M K +WN++I+ YA
Sbjct: 58 TGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGY 117
Query: 266 -QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
Q GL A+ +F +M+ S V + T+S VL + A L +G+ IH V+K+ L
Sbjct: 118 NQFGLFDNAIWMFAKMI-SERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSC 176
Query: 325 VIVGTSIIDMYCKC-------------------------------GQVDLARKAFNQMKE 353
V V TS+++MY KC GQ +LA F +M +
Sbjct: 177 VPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPD 236
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMI-KAGVRPNYITFVSVLSACSH 403
+++ SW +MI+GY EAL +F KM+ + ++P+ T S+LSAC++
Sbjct: 237 RDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACAN 287
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/626 (38%), Positives = 369/626 (58%), Gaps = 41/626 (6%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N +I L +GG+ +A+ PT+ TF I SC+ + L G H++
Sbjct: 51 NQLIQSLCKGGNLKQAIHLLCC----EPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVS 106
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
GF +D F+++ LI+MY + G + ARK+FDE R R I W ++ +E L
Sbjct: 107 SGFDQDPFLATKLINMYYELGSIDRARKVFDE--TRERTIYVWNALFRALAMVGCGKELL 164
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC--SRVTVNGVTEGA--HGFVIKR 217
L+ + N + D VL AC S ++V+ + +G H +++
Sbjct: 165 DLYVQM------------NWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRH 212
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
G+++ + V TL+D YA+ G V + VF M K+ V+W+++IA +A+N + +AL++F
Sbjct: 213 GYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELF 272
Query: 278 D-QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
M+++ D N+VT+ VL A A L L GK IH +++ L+ + V ++I MY
Sbjct: 273 QLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYG 332
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
+CG++ + ++ F+ MK ++V SW ++I+ YGMH ++A+ +F MI G P+YI+F++
Sbjct: 333 RCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFIT 392
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VL ACSHAGLV+EG +M ++ I PG+EHY CMVDLLGRA +L EA LIE M +
Sbjct: 393 VLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFE 452
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
VWGSLLG+CRIH NV+L E A+ LFELEP N G +VLL++IYA A W + +
Sbjct: 453 PGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVM 512
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
L++ R L K PG S +E++ KV++F+ D+ +PQ E+I+ L +L+ +++ GYV
Sbjct: 513 KLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTN 572
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V++D+D+EEKE + HSEKLA NLR+C DCH V + ISK
Sbjct: 573 VVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFA 632
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
+REI+VRD RFH+FKDG+CSCGDYW
Sbjct: 633 NREILVRDVNRFHHFKDGVCSCGDYW 658
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/626 (38%), Positives = 370/626 (59%), Gaps = 41/626 (6%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N +I L + G +ALR S +P++ T+ I C L G + H+
Sbjct: 50 NQLIQSLCKEGKLKQALRVLSQ----ESSPSQQTYELLILCCGHRSSLSDGLRVHRHILD 105
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
G +D F+++ LI MYS G + ARK+FD+ R R I W ++ + E L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT--RKRTIYVWNALFRALTLAGHGEEVL 163
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC--SRVTVNGVTEGA--HGFVIKR 217
L+ + N V D VL AC S T + +T+G H + +R
Sbjct: 164 GLYWKM------------NRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRR 211
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
G++S V + TL+D YAR G VD + VF+GM ++ V+W+++IA YA+NG A EAL F
Sbjct: 212 GYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271
Query: 278 DQMVKST-DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
+M+ T D N+VT+ +VL A A L L G+ IH +++ L+ + V ++++ MY
Sbjct: 272 REMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYG 331
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
+CG++D+ ++ F++M +++V SW ++I+ YG+H R+A+ +F +M+ G P +TFVS
Sbjct: 332 RCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVS 391
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VL ACSH GLV+EG +M + I+P VEHY CMVDLLGRA +L EA +++ M+ +
Sbjct: 392 VLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
VWGSLLG+CRIH NV+L E A+++LF LEP N G +VLL++IYA A W++V+R +
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVK 511
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
L+++R L K PG +E+R K+++F+ D+ +P E+I+ +L +L ++E GY+
Sbjct: 512 KLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTK 571
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V+++++ EEKE + HSEKLA NLR+C DCH + ISK +
Sbjct: 572 GVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFM 631
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
++EI+VRD RFH FK+G+CSCGDYW
Sbjct: 632 EKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 108/232 (46%), Gaps = 22/232 (9%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSL--TPTRSTFPCAIKSCSALHDLHSGKQ 94
NV SW+++IA A+ G + EALR F M + +P T +++C++L L G+
Sbjct: 247 NVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRL 306
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H G + V SAL+ MY +CG+L +++FD + R++VSW S+++ Y +
Sbjct: 307 IHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHD--RDVVSWNSLISSYGVH 364
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
R+A+ +F+E L GAS V SVL ACS + V EG F
Sbjct: 365 GYGRKAIQIFEEML-----ANGASPT-------PVTFVSVLGACSHEGL--VEEGKRLFE 410
Query: 215 I---KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
G +V ++D R +D + K+ M E W S++
Sbjct: 411 SMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/597 (40%), Positives = 352/597 (58%), Gaps = 42/597 (7%)
Query: 71 PTRSTFPCAIKSCSAL-HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P+ TFP A+KS S L H L +G+Q H ++ H + V ++L+ +Y++CG L A++
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FDE+P + VSWT+++T Y+ + REA+ + + ++ + DS
Sbjct: 128 VFDEMPHP--STVSWTALITAYMDAGDLREAVHVARNAF------------ANGMRPDSF 173
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
VL+AC+RV E + G V V +D Y + G + +R+VFD M
Sbjct: 174 TAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKM 233
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+KDAV W +++ YA NG EALD+F M ++ V+ + ++ L A LG L LG
Sbjct: 234 RDKDAVAWGAMVGGYASNGHPREALDLFLAM-QAEGVRPDCYAVAGALSACTRLGALDLG 292
Query: 310 KCIHDQVIKM----DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
+ Q I+M + ++ ++GT++IDMY KCG A F QM++K++ W AMI G
Sbjct: 293 R----QAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILG 348
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
GM + A L +M K+GV+ N TF+ +L +C+H GL+Q+G + + M ++I P
Sbjct: 349 LGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 408
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
+EHYGC+VDLL RAG L+EA+ LI+ M + A+ V+ G+LLG C+IH+N +L E +L
Sbjct: 409 RIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQL 468
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
LEP N G +V+LSNIY+N GRWED + R MK + + K P S VE GKVH F VG
Sbjct: 469 IRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVG 528
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
DK HP ++IY+ L+EL ++++ +GY V+ DV+ EEKE TL HSEKLA
Sbjct: 529 DKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLL 588
Query: 600 ------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT I+LIS++ REI+VRD+ RFH F+DG CSC DYW
Sbjct: 589 VTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 176/374 (47%), Gaps = 33/374 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALR----AFSS-MRKLSLTPTRSTFPCAIKSCSALHDLHS 91
+ SW ++I GD EA+ AF++ MR S T R + +C+ + DL +
Sbjct: 136 STVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVR-----VLTACARVADLAT 190
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ + A G + VFV++A +D+Y KCGE++ AR++FD++ R ++ V+W +M+ GY
Sbjct: 191 GETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKM--RDKDAVAWGAMVGGY 248
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
N + REAL LF + ++ V D A+A LSAC+R+ + A
Sbjct: 249 ASNGHPREALDLF------------LAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAI 296
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
V F +G LID YA+ G + VF M +KD + WN++I G
Sbjct: 297 RMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEK 356
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTS 330
A + QM KS VK N T +L + H G+++ G + H+ + +
Sbjct: 357 TAFTLIGQMEKS-GVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC 415
Query: 331 IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
I+D+ + G + A + + M N A++ G +H A A + ++I+ + P
Sbjct: 416 IVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIR--LEP 473
Query: 390 ----NYITFVSVLS 399
NY+ ++ S
Sbjct: 474 WNSGNYVMLSNIYS 487
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 2/152 (1%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K ++ WN++I L G A M K + +TF + SC+ + G++
Sbjct: 336 KKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR 395
Query: 95 A-HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H ++ + ++D+ S+ G L +A +L D++P N V ++L G
Sbjct: 396 YFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPA-NAVILGALLGGCKI 454
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVF 185
+ NA A + + + E G N++
Sbjct: 455 HRNAELAEHVLTQLIRLEPWNSGNYVMLSNIY 486
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/658 (37%), Positives = 372/658 (56%), Gaps = 33/658 (5%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
++S +S+V+ K+ + +F++ +++ V SWNS+I G + + L F M
Sbjct: 229 RNSVGNSLVAFYLKNQRVDSARKVFDEMTERD-VISWNSIINGYVSNGLAEKGLSVFVQM 287
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
+ +T C+ + G+ H F R+ + L+DMYSKCG+L
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
A+ +F E+ R ++VS+TSM+ GY + A EA+ LF+E +EE + +
Sbjct: 348 DSAKAVFREMSDR--SVVSYTSMIAGYAREGLAGEAVKLFEE--MEE----------EGI 393
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
D + +VL+ C+R + + H ++ + ++ V N L+D YA+ G + +
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VF M KD ++WN+II Y++N A EAL +F+ +++ + T++ VL A A L
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
G+ IH +++ V S++DMY KCG + LA F+ + K++ SWT MIA
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
GYGMH +EA+ LF +M +AG+ + I+FVS+L ACSH+GLV EGW + N M HE IE
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 633
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
P VEHY C+VD+L R G L +AY IE M + D +WG+LL CRIH +V L E A+K
Sbjct: 634 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 693
Query: 485 LFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLV 544
+FELEP N GY+VL++NIYA A +WE V+R R + R L K PG S +E++G+V+ F+
Sbjct: 694 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVA 753
Query: 545 GDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----- 599
GD +P+ E I +L ++ ++ E GY + D ++ EKE L HSEKLA
Sbjct: 754 GDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGI 813
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH + + +SK+ REIV+RDS RFH FKDG CSC +W
Sbjct: 814 ISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 218/437 (49%), Gaps = 26/437 (5%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN ++ +LA+ GD ++ F M + TF C KS S+L +H G+Q H
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
GF V ++L+ Y K + ARK+FDE+ + R+++SW S++ GYV N A +
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE--RDVISWNSIINGYVSNGLAEKG 280
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
L +F + L+ E +D I SV + C+ + + H +K F
Sbjct: 281 LSVFVQMLVSGIE------------IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
E NTL+D Y++ G +D ++ VF M ++ V++ S+IA YA+ GLA EA+ +F++M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
+ + + T++AVL A +L GK +H+ + + DL + V +++DMY KCG
Sbjct: 389 -EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-VRPNYITFVSVLS 399
+ A F++M+ K++ SW +I GY +C A EAL LF +++ P+ T VL
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGV---EHYG-CMVDLLGRAGKLKEAYDLIEGMKV 455
AC+ +G H + + G H +VD+ + G L A+ L + +
Sbjct: 508 ACASLSAFDKGREI-----HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 562
Query: 456 KADFVVWGSLLGACRIH 472
K D V W ++ +H
Sbjct: 563 K-DLVSWTVMIAGYGMH 578
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 214/432 (49%), Gaps = 29/432 (6%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N+ + G+ A++ K + P T ++ C+ L GK+
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
GF D + S L MY+ CG+L +A ++FDE+ +I + W ++ ++ + ++
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV--KIEKALFWNILMNELAKSGDFSGSI 180
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
LFK+ + S V +DS + V + S + E HGF++K GF
Sbjct: 181 GLFKKMM------------SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGE 228
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
VGN+L+ Y + VD +RKVFD M E+D ++WNSII Y NGLA + L VF QM+
Sbjct: 229 RNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML 288
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
S ++ + T+ +V A ++ LG+ +H +K +++DMY KCG +
Sbjct: 289 VS-GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
D A+ F +M +++V S+T+MIAGY A EA+ LF +M + G+ P+ T +VL+ C
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407
Query: 402 SHAGLVQEG-----WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+ L+ EG W N +G + + ++D+ + G ++EA + M+VK
Sbjct: 408 ARYRLLDEGKRVHEWIKENDLGFDIFVSNA------LMDMYAKCGSMQEAELVFSEMRVK 461
Query: 457 ADFVVWGSLLGA 468
D + W +++G
Sbjct: 462 -DIISWNTIIGG 472
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/631 (38%), Positives = 370/631 (58%), Gaps = 44/631 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL--SLTPTRSTFPCAIKSCSALHDLH 90
+ ++ +WN+++A A G A+ SM+ L P ST + + L
Sbjct: 71 MPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALA 130
Query: 91 SGKQAHQQAFIFGFHRD----------VFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
G H H + V + +AL+DMY+KCG L AR++FD +P R N
Sbjct: 131 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR--N 188
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
V+W++++ G+V +A LLFK +L + C F+ +IAS L AC+
Sbjct: 189 EVTWSALIGGFVLCSRMTQAFLLFKA-MLAQGLC----------FLSPTSIASALRACAS 237
Query: 201 VTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSI 260
+ + E H + K G +++ GN+L+ YA+ G +D + +FD M KD V+++++
Sbjct: 238 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 297
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
++ Y QNG A EA VF +M ++ +V+ +A T+ +++ A +HL L+ G+C H VI
Sbjct: 298 VSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
L + ++IDMY KCG++DL+R+ FN M +++ SW MIAGYG+H +EA LF
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+M G P+ +TF+ +LSACSH+GLV EG HW + MGH + + P +EHY CMVDLL R
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 476
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
G L EAY+ I+ M ++AD VW +LLGACR++KN+DLG+ ++ + EL P G VLLS
Sbjct: 477 GFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLS 536
Query: 501 NIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLE 560
NIY+ AGR+++ R + K + K+PG S +E+ G +HAF+ GD+ HPQ +IY L+
Sbjct: 537 NIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELD 596
Query: 561 ELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLR 602
+ V ++++GY D + V+ D+++EEKE L HSEKLA NLR
Sbjct: 597 NILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLR 656
Query: 603 VCGDCHTVIRLISKVVDREIVVRDSKRFHYF 633
VCGDCHTVI+ IS V R I+VRD+ RFH+F
Sbjct: 657 VCGDCHTVIKHISLVKRRAIIVRDANRFHHF 687
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 219/448 (48%), Gaps = 41/448 (9%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M + + P TFP A+K+CSAL D H G+ H+ A G D+FVS+AL+DMY KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L DA +F +P R++V+W +ML GY + A+ L + + N+
Sbjct: 61 LPDAAHIFATMPA--RDLVAWNAMLAGYAHHGMYHHAV---AHLLSMQMQMHRLRPNAST 115
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGA--HGFVI----------KRGFDSEVGVGNTLID 231
+ VA+ +L+ + +G H + I K V +G L+D
Sbjct: 116 L----VALLPLLA-----QQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLD 166
Query: 232 AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
YA+ G + +R+VFD M ++ VTW+++I + +A +F M+ +
Sbjct: 167 MYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 226
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
++++ L A A L LR+G+ +H + K + + G S++ MY K G +D A F++M
Sbjct: 227 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 286
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
K+ S++A+++GY + RA EA +F KM V P+ T VS++ ACSH +Q G
Sbjct: 287 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG- 345
Query: 412 HWLNTMGHEFNIEPGV--EHYGC--MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
H I G+ E C ++D+ + G++ + + M + D V W +++
Sbjct: 346 ----RCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIA 400
Query: 468 ACRIHKNVDLGEIAAKKLFELEPNNCGY 495
IH LG+ A LF LE NN G+
Sbjct: 401 GYGIH---GLGK-EATALF-LEMNNLGF 423
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L+ +S+ + + ++ +L+ + ++ SWN++IA G EA F
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ-AHQQAFIFGFHRDVFVSSALIDMYSKC 121
M L P TF C + +CS + GK H +G + ++D+ S+
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 476
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSML 148
G L +A + +P R ++ W ++L
Sbjct: 477 GFLDEAYEFIQSMPLR-ADVRVWVALL 502
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/643 (37%), Positives = 379/643 (58%), Gaps = 42/643 (6%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++F++ +++N V SW +++ + G++ +L M + P TF ++K+C AL
Sbjct: 60 SVFDRMLERN-VVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGAL 118
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ +G Q H GF V +A IDMYSKCG + A ++F+++P RN+VSW +
Sbjct: 119 GVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMP--FRNLVSWNA 176
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV-TVNG 205
M+ G+ N R++L+LF+ D S L AC + + G
Sbjct: 177 MIAGHTHEGNGRKSLVLFQRM------------QGQGEVPDEFTFTSTLKACGALGAIRG 224
Query: 206 VTEGAHGFVIKRGFDSEVG--VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
T+ H +I RGF + + + ++D YA+ G++ ++KVFD + +K+ ++W+++I
Sbjct: 225 GTQ-IHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQG 283
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
+AQ G EA+D+F Q+ +S + LS ++ A L ++ GK +H ++K+
Sbjct: 284 FAQEGNLLEAMDLFRQLRESVS-NVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGL 342
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ V SIIDMY KCG + A + F++M+ +NV SWT MI GYG H +A+ LF +M
Sbjct: 343 DISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQ 402
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
G+ + + ++++LSACSH+GL++E + + + + ++P +EHY CMVD+LGRAG+L
Sbjct: 403 LDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQL 462
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
KEA +LIE MK+K + +W +LL ACR+H N+++G + LF ++ +N +V++SNIY
Sbjct: 463 KEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIY 522
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A AG W++ ER R L+K + L K G S VE+ ++H F GD HP EKI+E L+E+
Sbjct: 523 AEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEME 582
Query: 564 VKL-QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------------NL 601
++ +EVGY + +HDV++E KE LR+HSEKLA NL
Sbjct: 583 RRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNL 642
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
RVCGDCH I+ +SK++ + VVRD+ RFH F+DGLCSCGDYW
Sbjct: 643 RVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 233/497 (46%), Gaps = 61/497 (12%)
Query: 73 RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFD 132
R +++CS G Q H A GF D+ +++ LIDMY KC + A +FD
Sbjct: 4 RQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFD 63
Query: 133 EIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIA 192
+ + RN+VSWT+++ GY+Q NA+ +L L E G S N F S +
Sbjct: 64 RMLE--RNVVSWTALMCGYLQEGNAKGSLALLCEM--------GYSGVKPNEFTFSTS-- 111
Query: 193 SVLSACSRVTV--NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
L AC + V NG+ HG +K GF+ VGN ID Y++ G + ++ +VF+ M
Sbjct: 112 --LKACGALGVVENGMQ--IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMP 167
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
++ V+WN++IA + G ++L +F +M +V + T ++ L A LG +R G
Sbjct: 168 FRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVP-DEFTFTSTLKACGALGAIRGGT 226
Query: 311 CIHDQVIKMDLEESV--IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
IH +I S+ I+ ++I+D+Y KCG + A+K F+++++KN+ SW+A+I G+
Sbjct: 227 QIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQ 286
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG-- 426
EA+DLF ++ ++ + ++ + LV++G + + G
Sbjct: 287 EGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQ---MHCYILKVPSGLD 343
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL--------LGACRIH------ 472
+ ++D+ + G +EA L M+V+ + V W + LG IH
Sbjct: 344 ISVANSIIDMYLKCGLTEEAERLFSEMQVR-NVVSWTVMITGYGKHGLGEKAIHLFNRMQ 402
Query: 473 -KNVDLGEIAAKKLF-------------ELEPNNCGYHVLLSNIYANA------GRWEDV 512
++L E+A L E C H + NI A GR +
Sbjct: 403 LDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQL 462
Query: 513 ERTRSLMKNRRLAKTPG 529
+ ++L++N +L G
Sbjct: 463 KEAKNLIENMKLKPNEG 479
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/634 (38%), Positives = 362/634 (57%), Gaps = 35/634 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ NV SW S+I+ LA+ G AL F MR+ + P TFPCA K+ ++L
Sbjct: 66 RLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPV 125
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+GKQ H A G DVFV + DMY K DARKLFDEIP+R N+ +W + ++
Sbjct: 126 TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPER--NLETWNAFISN 183
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
V + REA+ F EF + +S+ + L+ACS +
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGH------------PNSITFCAFLNACSDWLHLNLGMQL 231
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG V++ GFD++V V N LID Y + + S +F M K+AV+W S++A Y QN
Sbjct: 232 HGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHED 291
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+A ++ + K V+ + +S+VL A A + L LG+ IH +K +E ++ VG++
Sbjct: 292 EKASVLYLRSRKDI-VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA 350
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK--AGVR 388
++DMY KCG ++ + +AF++M EKN+ + ++I GY + AL LF +M G
Sbjct: 351 LVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT 410
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
PNY+TFVS+LSACS AG V+ G ++M + IEPG EHY C+VD+LGRAG ++ AY+
Sbjct: 411 PNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYE 470
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
I+ M ++ VWG+L ACR+H LG +AA+ LF+L+P + G HVLLSN +A AGR
Sbjct: 471 FIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGR 530
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
W + R +K + K G+S + ++ +VHAF D+ H +++I L +L +++
Sbjct: 531 WAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEA 590
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
GY D+ ++D+++EEK + HSEKLA NLR+CGDCH+
Sbjct: 591 AGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSF 650
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +S V REI+VRD+ RFH FKDG+CSC DYW
Sbjct: 651 FKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 183/392 (46%), Gaps = 32/392 (8%)
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL 168
F+++ LI+MYSK AR + P R N+VSWTS+++G QN + AL+ F E
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPAR--NVVSWTSLISGLAQNGHFSTALVEFFEMR 100
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
E G N A+AS+ R+ V G + H +K G +V VG +
Sbjct: 101 RE-----GVVPNDFTFPCAFKAVASL-----RLPVTG--KQIHALAVKCGRILDVFVGCS 148
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
D Y + D +RK+FD + E++ TWN+ I+ +G EA++ F + + D
Sbjct: 149 AFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF-RRIDGHP 207
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
N++T A L A + L LG +H V++ + V V +ID Y KC Q+ + F
Sbjct: 208 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 267
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-HAGLV 407
+M KN SW +++A Y + +A L+ + K V + SVLSAC+ AGL
Sbjct: 268 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE 327
Query: 408 QEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWG 463
L H ++ VE +VD+ G+ G ++++ + M K + V
Sbjct: 328 ------LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRN 380
Query: 464 SLLGACRIHKNVDLGEIAAKKLF-ELEPNNCG 494
SL+G VD+ A LF E+ P CG
Sbjct: 381 SLIGGYAHQGQVDM----ALALFEEMAPRGCG 408
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 306 LRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
+RLG+ +H +++K +D + +I+MY K + AR +NV SWT++I+
Sbjct: 22 MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLIS 81
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
G + AL F++M + GV PN TF A + L G
Sbjct: 82 GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/658 (37%), Positives = 372/658 (56%), Gaps = 33/658 (5%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
++S +S+V+ K+ + +F++ +++ V SWNS+I G + + L F M
Sbjct: 78 RNSVGNSLVAFYLKNQRVDSARKVFDEMTERD-VISWNSIINGYVSNGLAEKGLSVFVQM 136
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
+ +T C+ + G+ H F R+ + L+DMYSKCG+L
Sbjct: 137 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 196
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
A+ +F E+ R ++VS+TSM+ GY + A EA+ LF+E +EE + +
Sbjct: 197 DSAKAVFREMSDR--SVVSYTSMIAGYAREGLAGEAVKLFEE--MEE----------EGI 242
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
D + +VL+ C+R + + H ++ + ++ V N L+D YA+ G + +
Sbjct: 243 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 302
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VF M KD ++WN+II Y++N A EAL +F+ +++ + T++ VL A A L
Sbjct: 303 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 362
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
G+ IH +++ V S++DMY KCG + LA F+ + K++ SWT MIA
Sbjct: 363 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 422
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
GYGMH +EA+ LF +M +AG+ + I+FVS+L ACSH+GLV EGW + N M HE IE
Sbjct: 423 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 482
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
P VEHY C+VD+L R G L +AY IE M + D +WG+LL CRIH +V L E A+K
Sbjct: 483 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 542
Query: 485 LFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLV 544
+FELEP N GY+VL++NIYA A +WE V+R R + R L K PG S +E++G+V+ F+
Sbjct: 543 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVA 602
Query: 545 GDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----- 599
GD +P+ E I +L ++ ++ E GY + D ++ EKE L HSEKLA
Sbjct: 603 GDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGI 662
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH + + +SK+ REIV+RDS RFH FKDG CSC +W
Sbjct: 663 ISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 218/437 (49%), Gaps = 26/437 (5%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN ++ +LA+ GD ++ F M + TF C KS S+L +H G+Q H
Sbjct: 12 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 71
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
GF V ++L+ Y K + ARK+FDE+ + R+++SW S++ GYV N A +
Sbjct: 72 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE--RDVISWNSIINGYVSNGLAEKG 129
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
L +F + L+ E +D I SV + C+ + + H +K F
Sbjct: 130 LSVFVQMLVSGIE------------IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 177
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
E NTL+D Y++ G +D ++ VF M ++ V++ S+IA YA+ GLA EA+ +F++M
Sbjct: 178 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 237
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
+ + + T++AVL A +L GK +H+ + + DL + V +++DMY KCG
Sbjct: 238 -EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 296
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-VRPNYITFVSVLS 399
+ A F++M+ K++ SW +I GY +C A EAL LF +++ P+ T VL
Sbjct: 297 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 356
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGV---EHYG-CMVDLLGRAGKLKEAYDLIEGMKV 455
AC+ +G H + + G H +VD+ + G L A+ L + +
Sbjct: 357 ACASLSAFDKGREI-----HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 411
Query: 456 KADFVVWGSLLGACRIH 472
K D V W ++ +H
Sbjct: 412 K-DLVSWTVMIAGYGMH 427
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 177/343 (51%), Gaps = 27/343 (7%)
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
FDE+ +I + W ++ ++ + ++ LFK+ + S V +DS
Sbjct: 1 FDEV--KIEKALFWNILMNELAKSGDFSGSIGLFKKMM------------SSGVEMDSYT 46
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+ V + S + E HGF++K GF VGN+L+ Y + VD +RKVFD M
Sbjct: 47 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 106
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
E+D ++WNSII Y NGLA + L VF QM+ S ++ + T+ +V A ++ LG+
Sbjct: 107 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGR 165
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
+H +K +++DMY KCG +D A+ F +M +++V S+T+MIAGY
Sbjct: 166 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 225
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG-----WHWLNTMGHEFNIEP 425
A EA+ LF +M + G+ P+ T +VL+ C+ L+ EG W N +G + +
Sbjct: 226 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS- 284
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
++D+ + G ++EA + M+VK D + W +++G
Sbjct: 285 -----NALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGG 321
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/634 (38%), Positives = 362/634 (57%), Gaps = 35/634 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ NV SW S+I+ LA+ G AL F MR+ + P TFPCA K+ ++L
Sbjct: 16 RLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPV 75
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+GKQ H A G DVFV + DMY K DARKLFDEIP+R N+ +W + ++
Sbjct: 76 TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPER--NLETWNAFISN 133
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
V + REA+ F EF + +S+ + L+ACS +
Sbjct: 134 SVTDGRPREAIEAFIEFRRIDGH------------PNSITFCAFLNACSDWLHLNLGMQL 181
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG V++ GFD++V V N LID Y + + S +F M K+AV+W S++A Y QN
Sbjct: 182 HGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHED 241
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+A ++ + K V+ + +S+VL A A + L LG+ IH +K +E ++ VG++
Sbjct: 242 EKASVLYLRSRKDI-VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA 300
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK--AGVR 388
++DMY KCG ++ + +AF++M EKN+ + ++I GY + AL LF +M G
Sbjct: 301 LVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT 360
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
PNY+TFVS+LSACS AG V+ G ++M + IEPG EHY C+VD+LGRAG ++ AY+
Sbjct: 361 PNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYE 420
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
I+ M ++ VWG+L ACR+H LG +AA+ LF+L+P + G HVLLSN +A AGR
Sbjct: 421 FIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGR 480
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
W + R +K + K G+S + ++ +VHAF D+ H +++I L +L +++
Sbjct: 481 WAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEA 540
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
GY D+ ++D+++EEK + HSEKLA NLR+CGDCH+
Sbjct: 541 AGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSF 600
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +S V REI+VRD+ RFH FKDG+CSC DYW
Sbjct: 601 FKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 176/384 (45%), Gaps = 32/384 (8%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MYSK AR + P R N+VSWTS+++G QN + AL+ F E E G
Sbjct: 1 MYSKLDHPESARLVLRLTPAR--NVVSWTSLISGLAQNGHFSTALVEFFEMRRE-----G 53
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
N A+AS+ R+ V G + H +K G +V VG + D Y +
Sbjct: 54 VVPNDFTFPCAFKAVASL-----RLPVTG--KQIHALAVKCGRILDVFVGCSAFDMYCKT 106
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
D +RK+FD + E++ TWN+ I+ +G EA++ F + + D N++T A
Sbjct: 107 RLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF-RRIDGHPNSITFCAF 165
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A + L LG +H V++ + V V +ID Y KC Q+ + F +M KN
Sbjct: 166 LNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNA 225
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-HAGLVQEGWHWLN 415
SW +++A Y + +A L+ + K V + SVLSAC+ AGL L
Sbjct: 226 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE------LG 279
Query: 416 TMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
H ++ VE +VD+ G+ G ++++ + M K + V SL+G
Sbjct: 280 RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSLIGGYAH 338
Query: 472 HKNVDLGEIAAKKLF-ELEPNNCG 494
VD+ A LF E+ P CG
Sbjct: 339 QGQVDM----ALALFEEMAPRGCG 358
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/570 (41%), Positives = 344/570 (60%), Gaps = 34/570 (5%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H G +D+ +++ L+ Y++ + DA LFD + +R+ +W+ M+ G+
Sbjct: 20 RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLT--MRDSKTWSVMVGGFA 77
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ + F+E L CG V D+ + V+ C T + H
Sbjct: 78 KAGDHAGCYATFRELL----RCG--------VTPDNYTLPFVIRTCRDRTDLQIGRVIHD 125
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V+K G S+ V +L+D YA+ V+ ++++F+ M+ KD VTW +I YA A E
Sbjct: 126 VVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYE 184
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
+L +FD+M + V + V + V+ A A LG + + +D +++ VI+GT++I
Sbjct: 185 SLVLFDRM-REEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMI 243
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG V+ AR+ F++MKEKNV SW+AMIA YG H R ++A+DLF+ M+ + PN +
Sbjct: 244 DMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRV 303
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TFVS+L ACSHAGL++EG + N+M E + P V+HY CMVDLLGRAG+L EA LIE
Sbjct: 304 TFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEA 363
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M V+ D +W +LLGACRIH ++L E AA L EL+P N G++VLLSNIYA AG+WE V
Sbjct: 364 MTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKV 423
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+ R +M R+L K PG++ +E+ K + F VGD+ HPQ ++IYE L L KL+ GYV
Sbjct: 424 AKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYV 483
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D V+ DV++E K+ L HSEKLA NLRVCGDCHT +++
Sbjct: 484 PDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMV 543
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S ++ R I+VRD+ RFH+F DG CSCGDYW
Sbjct: 544 SSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 189/360 (52%), Gaps = 27/360 (7%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP 77
+H + +LF+ +++ +W+ ++ A+ GD F + + +TP T P
Sbjct: 47 QHKAIDDAYSLFDGLTMRDSK-TWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLP 105
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
I++C DL G+ H G D FV ++L+DMY+KC + DA++LF+ +
Sbjct: 106 FVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLS- 164
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+++V+WT M+ Y + NA E+L+LF + V D VA+ +V++A
Sbjct: 165 -KDLVTWTVMIGAYA-DCNAYESLVLFDRM------------REEGVVPDKVAMVTVVNA 210
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C+++ A+ ++++ GF +V +G +ID YA+ G V+ +R+VFD M EK+ ++W
Sbjct: 211 CAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISW 270
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-----KCI 312
+++IA Y +G +A+D+F M+ S + N VT ++L A +H G++ G
Sbjct: 271 SAMIAAYGYHGRGKDAIDLFHMML-SCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMW 329
Query: 313 HDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCR 371
+ ++ D++ T ++D+ + G++D A + M EK+ R W+A++ +H +
Sbjct: 330 EEHAVRPDVKHY----TCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSK 385
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/605 (39%), Positives = 362/605 (59%), Gaps = 39/605 (6%)
Query: 53 DSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF-HRDVFVS 111
D L A +++ SL P + + +K C+ L + G+ H F + +
Sbjct: 67 DGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQ 126
Query: 112 SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
+ +++MY+KCG L DAR++FDE+P +++V+WT+++ G+ QN+ R+ALLLF + L
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMP--TKDMVTWTALIAGFSQNNRPRDALLLFPQMLRL- 183
Query: 172 SECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTL 229
G N ++S+L A + +G+ G H F +K G+ S V VG+ L
Sbjct: 184 ----GFQPNH-------FTLSSLLKASG--SEHGLDPGTQLHAFCLKYGYQSSVYVGSAL 230
Query: 230 IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCN 289
+D YAR GH+D ++ FDGM K V+WN++I+ +A+ G AL + +M + + +
Sbjct: 231 VDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK-NFQPT 289
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
T S+VL A A +G L GK +H +IK L+ +G +++DMY K G +D A++ F+
Sbjct: 290 HFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFD 349
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
++ + +V SW M+ G H +E LD F +M++ G+ PN I+F+ VL+ACSH+GL+ E
Sbjct: 350 RLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDE 409
Query: 410 GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G ++ M ++ +EP V HY VDLLGR G L A I M ++ VWG+LLGAC
Sbjct: 410 GLYYFELM-KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGAC 468
Query: 470 RIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPG 529
R+HKN++LG AA++ FEL+P++ G +LLSNIYA+AGRW DV + R +MK + K P
Sbjct: 469 RMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPA 528
Query: 530 FSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEM 589
S VE+ VH F+ D+ HP+ ++I EE++ K++E+GYV D + V+ VDQ+E+E
Sbjct: 529 CSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREE 588
Query: 590 TLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFH 631
L+ HSEKLA N+RVCGDCH I+ +SKVVDREI+VRD+ RFH
Sbjct: 589 KLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFH 648
Query: 632 YFKDG 636
F+DG
Sbjct: 649 RFRDG 653
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 172/343 (50%), Gaps = 17/343 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ K+ V +W ++IA ++ +AL F M +L P T +K+ + H
Sbjct: 145 MFDEMPTKDMV-TWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEH 203
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G Q H +G+ V+V SAL+DMY++CG + A+ FD +P ++ VSW ++
Sbjct: 204 GLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP--TKSEVSWNAL 261
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G+ + AL L + N +SVLSAC+ +
Sbjct: 262 ISGHARKGEGEHALHLLWKM------------QRKNFQPTHFTYSSVLSACASIGALEQG 309
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H +IK G +GNTL+D YA+ G +D +++VFD +++ D V+WN+++ AQ+
Sbjct: 310 KWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQH 369
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL E LD F+QM++ ++ N ++ VL A +H G+L G + + K +E V
Sbjct: 370 GLGKETLDRFEQMLR-IGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPH 428
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+ +D+ + G +D A + +M E W A++ MH
Sbjct: 429 YVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMH 471
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 260/664 (39%), Positives = 381/664 (57%), Gaps = 53/664 (7%)
Query: 2 KLSKSSSVS--SVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
K+S+ +++S +VS + +F++ ++N V SW +++ + G EA
Sbjct: 154 KMSERNTISWNGLVSGYINNGMINEAREVFDRMPERN-VVSWTAMVRGYVKEGMISEAET 212
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
F M P ++ + L + + + F +DV + +I Y
Sbjct: 213 LFWQM------PEKNVVSWTVMLGGLLQEGRIDEAC--RLFDMMPEKDVVTRTNMIGGYC 264
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
+ G L +AR LFDE+P+R N+VSWT+M+TGYVQN A LF E + E++E
Sbjct: 265 QVGRLVEARMLFDEMPRR--NVVSWTTMITGYVQNQQVDIARKLF-EVMPEKNE------ 315
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
V A+ + C R+ + +E + IK V N +I + + G V
Sbjct: 316 ------VSWTAMLKGYTNCGRL--DEASELFNAMPIK-----SVVACNAMILCFGQNGEV 362
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+R+VFD M EKD TW+++I +Y + GL +AL++F +M++ ++ N +L +VL
Sbjct: 363 PKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELF-RMMQREGIRPNFPSLISVLSV 421
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A L L G+ IH Q+++ + V V + ++ MY KCG + A++ F++ K+V W
Sbjct: 422 CAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMW 481
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
++I GY H EAL +F+ M +G+ P+ +TFV VLSACS+ G V++G N+M
Sbjct: 482 NSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMET 541
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
++ +E +EHY CMVDLLGRAGKL EA DLIE M ++AD ++WG+LLGACR H +DL E
Sbjct: 542 KYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAE 601
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
+AAKKL LEP N G +LLSNIYA+ GRW+DV R M++RR++K PG S + + KV
Sbjct: 602 VAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKV 661
Query: 540 HAFLVGDKE-HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
H F GD HP+H +I LE L+ L+E GY D + V+HDVD+EEK +L HSEKL
Sbjct: 662 HKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKL 721
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVCGDCH I+LI+KV REI++RD+ RFH+FKDG CSC
Sbjct: 722 AVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSC 781
Query: 641 GDYW 644
DYW
Sbjct: 782 RDYW 785
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 79/413 (19%)
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
+ ++LI YS+ G++ AR +FDE+ R +NI+SW S++ GY QN +EA +F +
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEM--RDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155
Query: 168 LLEESECGGASENS-DNVFVDSVAIASVLSACSRVTVNGV---TEGAHGFVIKRGFDSE- 222
SE S N + ++++ I R+ V T G+V K G SE
Sbjct: 156 ----SERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYV-KEGMISEA 210
Query: 223 -----------VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
V ++ + G +D + ++FD M EKD VT ++I Y Q G
Sbjct: 211 ETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLV 270
Query: 272 EALDVFDQMVKSTDV--------------------------KCNAVTLSAVLLAIAHLGV 305
EA +FD+M + V + N V+ +A+L + G
Sbjct: 271 EARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGR 330
Query: 306 L-RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L + + IK SV+ ++I + + G+V AR+ F+QM+EK+ +W+AMI
Sbjct: 331 LDEASELFNAMPIK-----SVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIK 385
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGWHW 413
Y +AL+LF M + G+RPN+ + +SVLS C+ HA LV+
Sbjct: 386 VYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRS---- 441
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+F+++ V ++ + + G L +A + + VK D V+W S++
Sbjct: 442 ------QFDLDVYVA--SVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSII 485
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 156/354 (44%), Gaps = 48/354 (13%)
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
N F S I S S +R + G E A V D + N+++ Y + +
Sbjct: 90 NRFYCSNFIISRNSLITRYSRLGQIEKAR-VVFDEMRDKNIISWNSIVAGYFQNKRPQEA 148
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
+ +FD M E++ ++WN +++ Y NG+ EA +VFD+M + N V+ +A++
Sbjct: 149 QNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPER-----NVVSWTAMVRGYVK 203
Query: 303 LGVLR--------------------LGKCIHD-------QVIKMDLEESVIVGTSIIDMY 335
G++ LG + + ++ M E+ V+ T++I Y
Sbjct: 204 EGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGY 263
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
C+ G++ AR F++M +NV SWT MI GY + + +D+ K+ + N +++
Sbjct: 264 CQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQN----QQVDIARKLFEVMPEKNEVSWT 319
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC--MVDLLGRAGKLKEAYDLIEGM 453
++L ++ G + E N M P C M+ G+ G++ +A + + M
Sbjct: 320 AMLKGYTNCGRLDEASELFNAM-------PIKSVVACNAMILCFGQNGEVPKARQVFDQM 372
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ K D W +++ K ++L + ++ + E + L+S + AG
Sbjct: 373 REK-DEGTWSAMIKVYE-RKGLELDALELFRMMQREGIRPNFPSLISVLSVCAG 424
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/624 (37%), Positives = 364/624 (58%), Gaps = 35/624 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SWN++++ + + +A+ F M+ P + + I + +L +G + H A
Sbjct: 319 SWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYA 378
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G ++ + ++LIDMY KC + F+ +P++ +++SWT+++ GY QN+ +
Sbjct: 379 IKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEK--DLISWTTIIAGYAQNECHLD 436
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
AL L ++ LE+ + VD + I S+L ACS + + + HG+V+K G
Sbjct: 437 ALNLLRKVQLEKMD------------VDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL 484
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+++ + N +++ Y VD +R VF+ + KD V+W S+I NGLA EAL++F+
Sbjct: 485 -ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNS 543
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
+++ T+++ + +TL +VL A A L L+ GK IH +I+ ++ S++DMY +CG
Sbjct: 544 LIE-TNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCG 602
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
++ AR FN +K++++ WT+MI GMH ++A+DLF KM V P++ITF+++L
Sbjct: 603 TMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLY 662
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
ACSH+GLV EG M +E+ +EP EHY C+VDLL R+ L+EAY + M ++
Sbjct: 663 ACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSA 722
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
VW +LLGACRIH N DLGE+AAKKL +L N G +VL+SN +A GRW DVE RS+M
Sbjct: 723 EVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIM 782
Query: 520 KNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV-GYVTDMTSV 578
K +L K PG S +E+ K+H F+ DK HPQ IY L + L+E GY V
Sbjct: 783 KGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLV 842
Query: 579 IHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
HDV +EEK L HSE+LA NLR+C DCH ++ S++ R
Sbjct: 843 FHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQR 902
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
+VVRD+ RFH+F+ GLCSCGD+W
Sbjct: 903 TLVVRDASRFHHFERGLCSCGDFW 926
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 154/491 (31%), Positives = 242/491 (49%), Gaps = 40/491 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++ +F+WN++I G VEA+ + MR L ++ TFPC +K+C A
Sbjct: 104 VFDKMSERT-IFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFK 162
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G + H A G+ VFV +ALI MY+KCG+L AR LFD + VSW S+
Sbjct: 163 ERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSI 222
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ +V + EAL LF+ E G S ++ S L AC T +
Sbjct: 223 ISAHVGEGESLEALSLFRRM----QEVGVES--------NTYTFVSALQACEGPTFIKIG 270
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
G H ++K ++V V N LI YA G ++ + +VF M+ KD V+WN++++ QN
Sbjct: 271 RGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQN 330
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+ ++A++ F M S K + V++ ++ A L G +H IK ++ ++ +
Sbjct: 331 DMYSDAINHFQDMQDSGQ-KPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHI 389
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK--MIKA 385
G S+IDMY KC V AF M EK++ SWT +IAGY + +AL+L K + K
Sbjct: 390 GNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKM 449
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY---GCMVDLLGRAGK 442
V P I S+L ACS GL E L H + ++ G+ +V++ G
Sbjct: 450 DVDPMMIG--SILLACS--GLKSEK---LIKEIHGYVLKGGLADILIQNAIVNVYGELAL 502
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF------ELEPNNCGYH 496
+ A + E + K D V W S++ C +H + I A +LF +EP+
Sbjct: 503 VDYARHVFESINSK-DIVSWTSMITCC-VHNGL---AIEALELFNSLIETNIEPD---LI 554
Query: 497 VLLSNIYANAG 507
L+S +YA A
Sbjct: 555 TLVSVLYAAAA 565
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 199/411 (48%), Gaps = 34/411 (8%)
Query: 71 PTRSTFPC------AIKSCSALHDLHSGKQAHQQAFIFGFHRD-VFVSSALIDMYSKCGE 123
PT + FP A++ C++ L G+Q H + D VF+ + + MY KCG
Sbjct: 38 PTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGS 97
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
DA K+FD++ + R I +W +M+ V EA+ L+KE +
Sbjct: 98 FYDAVKVFDKMSE--RTIFTWNAMIGACVSAGRYVEAIELYKEMRVL------------G 143
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V +D+ VL AC + HG +K G+ V V N LI YA+ G + +R
Sbjct: 144 VSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGAR 203
Query: 244 KVFD-GMIEK-DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+FD G++EK D V+WNSII+ + G + EAL +F +M + V+ N T + L A
Sbjct: 204 VLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRM-QEVGVESNTYTFVSALQACE 262
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+++G+ IH ++K + V V ++I MY CGQ++ A + F M K+ SW
Sbjct: 263 GPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNT 322
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
+++G + +A++ F M +G +P+ ++ +++++A + + G H +
Sbjct: 323 LLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGME-----VHAY 377
Query: 422 NIEPGVE---HYG-CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
I+ G++ H G ++D+ G+ +K E M K D + W +++
Sbjct: 378 AIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEK-DLISWTTIIAG 427
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 130/274 (47%), Gaps = 25/274 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++ ++ SW S+I G ++EAL F+S+ + ++ P T + + +AL L G
Sbjct: 513 INSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKG 572
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H GF + ++++L+DMY++CG + +AR +F+ + Q R+++ WTSM+
Sbjct: 573 KEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQ--RDLILWTSMINANG 630
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ ++A+ LF + +NV D + ++L ACS + V EG
Sbjct: 631 MHGCGKDAIDLFSKM------------TDENVLPDHITFLALLYACSHSGL--VVEGKQH 676
Query: 213 F-VIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA---IYA 265
F ++K + E + L+D AR ++ + M IE A W +++ I++
Sbjct: 677 FEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHS 736
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
N L A Q+ +T+ N V +S A
Sbjct: 737 NNDLGEVAAKKLLQL--NTENSGNYVLVSNTFAA 768
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/644 (37%), Positives = 363/644 (56%), Gaps = 38/644 (5%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
N L + V +W S+I+ AL FS+MR+ + P TFPC K+
Sbjct: 59 PNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKA 118
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
++LH +GKQ H A G DVFV + DMYSK G +AR +FDE+P R N+
Sbjct: 119 SASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHR--NLA 176
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
+W + ++ VQ+ +A+ FK+FL + E +++ + L+AC+ +
Sbjct: 177 TWNAYMSNAVQDGRCLDAIAAFKKFLCVDGE------------PNAITFCAFLNACADIV 224
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD--GMIEKDAVTWNSI 260
+ HGF+++ + +V V N LID Y + G + S VF G ++ V+W S+
Sbjct: 225 SLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSL 284
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
+A QN A VF Q K +V+ +S+VL A A LG L LG+ +H +K
Sbjct: 285 LAALVQNHEEERACMVFLQARK--EVEPTDFMISSVLSACAELGGLELGRSVHALALKAC 342
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
+EE++ VG++++D+Y KCG ++ A + F +M E+N+ +W AMI GY AL LF
Sbjct: 343 VEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQ 402
Query: 381 KMIKA--GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
+M G+ +Y+T VSVLSACS AG V+ G +M + IEPG EHY C+VDLLG
Sbjct: 403 EMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLG 462
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVL 498
R+G + AY+ I+ M + VWG+LLGAC++H LG+IAA+KLFEL+P++ G HV+
Sbjct: 463 RSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVV 522
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEY 558
SN+ A+AGRWE+ R M++ + K G+S V ++ +VH F D H ++ +I
Sbjct: 523 FSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAM 582
Query: 559 LEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------N 600
L +L ++++ GYV D + D+++EEK + HSEK+A N
Sbjct: 583 LAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPIRITKN 642
Query: 601 LRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
LR+C DCH+ I+ ISK+V REI+VRD+ RFH FKDG CSC DYW
Sbjct: 643 LRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKDYW 686
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 13/200 (6%)
Query: 308 LGKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
LG+ +H +++ D + +++MY K + A+ + + V +WT++I+G
Sbjct: 25 LGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGC 84
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVL--SACSHAGLVQEGWHWLNTMGHE-FNI 423
+ R AL F M + V PN TF V SA H + + H L G ++
Sbjct: 85 VHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDV 144
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
G + D+ + G EA ++ + M + + W + + + L IAA
Sbjct: 145 FVGCSAF----DMYSKTGLRPEARNMFDEMPHR-NLATWNAYMSNA-VQDGRCLDAIAAF 198
Query: 484 KLF---ELEPNNCGYHVLLS 500
K F + EPN + L+
Sbjct: 199 KKFLCVDGEPNAITFCAFLN 218
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/676 (35%), Positives = 389/676 (57%), Gaps = 70/676 (10%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLT------------TLFNKYVDKNNVFSWNSVIADLAR 50
L K+ + ++ D S NT L+ ++F++ +KN+V SWN++++ +
Sbjct: 142 LGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDV-SWNALLSAYVQ 200
Query: 51 GGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFV 110
EA F S +L ++ C + + +Q + RDV
Sbjct: 201 NSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVEARQFFDSMNV----RDVVS 252
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+ +I Y++ G++ +AR+LFDE P ++++ +WT+M++GY+QN EA LF + + E
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDESP--VQDVFTWTAMVSGYIQNRMVEEARELFDK-MPE 309
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD----SEVGVG 226
+E V+ ++L+ G +G + K FD V
Sbjct: 310 RNE---------------VSWNAMLA--------GYVQGERMEMAKELFDVMPCRNVSTW 346
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
NT+I YA+ G + ++ +FD M ++D V+W ++IA Y+Q+G + EAL +F QM +
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG- 405
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+ N + S+ L A + L LGK +H +++K E VG +++ MYCKCG ++ A
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F +M K++ SW MIAGY H AL F M + G++P+ T V+VLSACSH GL
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V +G + TM ++ + P +HY CMVDLLGRAG L++A++L++ M + D +WG+LL
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
GA R+H N +L E AA K+F +EP N G +VLLSN+YA++GRW DV + R M+++ + K
Sbjct: 586 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 645
Query: 527 TPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
PG+S +E++ K H F VGD+ HP+ ++I+ +LEEL++++++ GYV+ + V+HDV++EE
Sbjct: 646 VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEE 705
Query: 587 KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSK 628
KE +R HSE+LA NLRVC DCH I+ ++++ R I++RD+
Sbjct: 706 KERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNN 765
Query: 629 RFHYFKDGLCSCGDYW 644
RFH+FKDG CSCGDYW
Sbjct: 766 RFHHFKDGSCSCGDYW 781
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 232/531 (43%), Gaps = 101/531 (19%)
Query: 18 KHSTNTNLTTLFNKYVDK---NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT---- 70
K +T T + K + K +++ WN I+ R G EALR F M + S
Sbjct: 41 KRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNG 100
Query: 71 ---------------------PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVF 109
P R + + + + GK ++ F RDV
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKA--RELFEIMPERDVC 158
Query: 110 VSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK---E 166
+ ++ Y++ G + DAR +FD +P+ +N VSW ++L+ YVQN EA +LFK
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPE--KNDVSWNALLSAYVQNSKMEEACMLFKSREN 216
Query: 167 FLLEESEC--GGASENSDNV----FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
+ L C GG + V F DS+ + V+S
Sbjct: 217 WALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVS------------------------ 252
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
NT+I YA+ G +D +R++FD +D TW ++++ Y QN + EA ++FD+M
Sbjct: 253 -----WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
+ N V+ +A+L + + K + D + +V ++I Y +CG+
Sbjct: 308 PER-----NEVSWNAMLAGYVQGERMEMAKELFDVMPC----RNVSTWNTMITGYAQCGK 358
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+ A+ F++M +++ SW AMIAGY + EAL LF +M + G R N +F S LS
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST 418
Query: 401 CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD-----LLGRAGKLKEAYDLIEGMKV 455
C+ ++ L H ++ G E GC V + + G ++EA DL + M
Sbjct: 419 CADVVALE-----LGKQLHGRLVKGGYET-GCFVGNALLLMYCKCGSIEEANDLFKEMAG 472
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLS 500
K D V W +++ H GE+A + FE L+P++ +LS
Sbjct: 473 K-DIVSWNTMIAGYSRH---GFGEVAL-RFFESMKREGLKPDDATMVAVLS 518
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 153/338 (45%), Gaps = 31/338 (9%)
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
A+ + R T + + ++K G DS++ N I +Y R G + + +VF M
Sbjct: 34 AANFHSLKRATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPR 92
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
+V++N +I+ Y +NG A +FD+M + V N ++ ++ LGK
Sbjct: 93 WSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN-------VMIKGYVRNRNLGKA 145
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
++ ++ E V +++ Y + G VD AR F++M EKN SW A+++ Y + +
Sbjct: 146 --RELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSK 203
Query: 372 AREALDLFYKMIKAGVRPNY--ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
EA LF R N+ +++ +L + E + ++M N+ V
Sbjct: 204 MEEACMLFKS------RENWALVSWNCLLGGFVKKKKIVEARQFFDSM----NVRD-VVS 252
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
+ ++ ++GK+ EA L + V+ D W +++ ++ V+ A++LF+
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDESPVQ-DVFTWTAMVSGYIQNRMVE----EARELFDKM 307
Query: 490 P--NNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLA 525
P N ++ +L+ Y R E + +M R ++
Sbjct: 308 PERNEVSWNAMLAG-YVQGERMEMAKELFDVMPCRNVS 344
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 260/664 (39%), Positives = 381/664 (57%), Gaps = 53/664 (7%)
Query: 2 KLSKSSSVS--SVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
K+S+ +++S +VS + +F++ ++N V SW +++ + G EA
Sbjct: 154 KMSERNTISWNGLVSGYINNGMINEAREVFDRMPERN-VVSWTAMVRGYVKEGMISEAET 212
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
F M P ++ + L + + + F +DV + +I Y
Sbjct: 213 LFWQM------PEKNVVSWTVMLGGLLQEGRIDEAC--RLFDMMPEKDVVTRTNMIGGYC 264
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
+ G L +AR LFDE+P+R N+VSWT+M+TGYVQN A LF E + E++E
Sbjct: 265 QVGRLVEARMLFDEMPRR--NVVSWTTMITGYVQNQQVDIARKLF-EVMPEKNE------ 315
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
V A+ + C R+ + +E + IK V N +I + + G V
Sbjct: 316 ------VSWTAMLKGYTNCGRL--DEASELFNAMPIK-----SVVACNAMILCFGQNGEV 362
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+R+VFD M EKD TW+++I +Y + GL +AL++F +M++ ++ N +L +VL
Sbjct: 363 PKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELF-RMMQREGIRPNFPSLISVLSV 421
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A L L G+ IH Q+++ + V V + ++ MY KCG + A++ F++ K+V W
Sbjct: 422 CAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMW 481
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
++I GY H EAL +F+ M +G+ P+ +TFV VLSACS+ G V++G N+M
Sbjct: 482 NSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMET 541
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
++ +E +EHY CMVDLLGRAGKL EA DLIE M ++AD ++WG+LLGACR H +DL E
Sbjct: 542 KYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAE 601
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
+AAKKL LEP N G +LLSNIYA+ GRW+DV R M++RR++K PG S + + KV
Sbjct: 602 VAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKV 661
Query: 540 HAFLVGDKE-HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
H F GD HP+H +I LE L+ L+E GY D + V+HDVD+EEK +L HSEKL
Sbjct: 662 HKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKL 721
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVCGDCH I+LI+KV REI++RD+ RFH+FKDG CSC
Sbjct: 722 AVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSC 781
Query: 641 GDYW 644
DYW
Sbjct: 782 RDYW 785
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 79/413 (19%)
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
+ ++LI YS+ G++ AR +FDE+ R +NI+SW S++ GY QN +EA +F +
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEM--RDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155
Query: 168 LLEESECGGASENS-DNVFVDSVAIASVLSACSRVTVNGV---TEGAHGFVIKRGFDSE- 222
SE S N + ++++ I R+ V T G+V K G SE
Sbjct: 156 ----SERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYV-KEGMISEA 210
Query: 223 -----------VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
V ++ + G +D + ++FD M EKD VT ++I Y Q G
Sbjct: 211 ETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLV 270
Query: 272 EALDVFDQMVKSTDV--------------------------KCNAVTLSAVLLAIAHLGV 305
EA +FD+M + V + N V+ +A+L + G
Sbjct: 271 EARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGR 330
Query: 306 L-RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L + + IK SV+ ++I + + G+V AR+ F+QM+EK+ +W+AMI
Sbjct: 331 LDEASELFNAMPIK-----SVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIK 385
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGWHW 413
Y +AL+LF M + G+RPN+ + +SVLS C+ HA LV+
Sbjct: 386 VYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRS---- 441
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+F+++ V ++ + + G L +A + + VK D V+W S++
Sbjct: 442 ------QFDLDVYVA--SVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSII 485
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 156/354 (44%), Gaps = 48/354 (13%)
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
N F S I S S +R + G E A V D + N+++ Y + +
Sbjct: 90 NRFYCSNFIISRNSLITRYSRLGQIEKAR-VVFDEMRDKNIISWNSIVAGYFQNKRPQEA 148
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
+ +FD M E++ ++WN +++ Y NG+ EA +VFD+M + N V+ +A++
Sbjct: 149 QNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPER-----NVVSWTAMVRGYVK 203
Query: 303 LGVLR--------------------LGKCIHD-------QVIKMDLEESVIVGTSIIDMY 335
G++ LG + + ++ M E+ V+ T++I Y
Sbjct: 204 EGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGY 263
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
C+ G++ AR F++M +NV SWT MI GY + + +D+ K+ + N +++
Sbjct: 264 CQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQN----QQVDIARKLFEVMPEKNEVSWT 319
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC--MVDLLGRAGKLKEAYDLIEGM 453
++L ++ G + E N M P C M+ G+ G++ +A + + M
Sbjct: 320 AMLKGYTNCGRLDEASELFNAM-------PIKSVVACNAMILCFGQNGEVPKARQVFDQM 372
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ K D W +++ K ++L + ++ + E + L+S + AG
Sbjct: 373 REK-DEGTWSAMIKVYE-RKGLELDALELFRMMQREGIRPNFPSLISVLSVCAG 424
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/622 (38%), Positives = 367/622 (59%), Gaps = 36/622 (5%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPT-RSTFPCAIKSCSALHDLHSGKQAHQQAF 100
+S+ A L+ D E+L+ S+ + S P R + +K C+ L G+ H
Sbjct: 20 HSLPAPLSEDSDD-ESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLI 78
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
F D+ +++ L++MY+KCG L +ARK+FD++P+R + V+WT++++GY Q+D +A
Sbjct: 79 QSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPER--DFVTWTTLISGYSQHDRPFDA 136
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
L+LF + L G S N ++SV+ A + HGF +K GFD
Sbjct: 137 LVLFNQMLR-----FGFSPNE-------FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD 184
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
S V VG+ L+D Y R G +D ++ VFD + ++ V+WN++IA +A+ +AL++F M
Sbjct: 185 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGM 244
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
++ + + + +++ A + G L GK +H +IK + G +++DMY K G
Sbjct: 245 LRE-GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGS 303
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+ ARK F+++ +++V SW +++ Y H EA+ F +M + G+RPN I+F+SVL+A
Sbjct: 304 IHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTA 363
Query: 401 CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
CSH+GL+ EGWH+ M + I HY +VDLLGRAG L A IE M ++
Sbjct: 364 CSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAA 422
Query: 461 VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMK 520
+W +LL ACR+HKN +LG AA+ +FEL+P++ G HV+L NIYA+ GRW D R R MK
Sbjct: 423 IWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMK 482
Query: 521 NRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIH 580
+ K P S VE+ +H F+ D+ HPQ E+I EE+ K++E+GYV D + VI
Sbjct: 483 ESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIV 542
Query: 581 DVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREI 622
VDQ+E+E+ L+ HSEK+A N+RVCGDCH+ I+L SK V REI
Sbjct: 543 HVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREI 602
Query: 623 VVRDSKRFHYFKDGLCSCGDYW 644
+VRD+ RFH+FKDG CSC DYW
Sbjct: 603 IVRDTNRFHHFKDGACSCKDYW 624
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 171/343 (49%), Gaps = 17/343 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K +++ V +W ++I+ ++ +AL F+ M + +P T IK+ +A
Sbjct: 108 VFDKMPERDFV-TWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAER 166
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G Q H GF +V V SAL+D+Y++ G + DA+ +FD + RN VSW ++
Sbjct: 167 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES--RNDVSWNAL 224
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + +AL LF+ L E + AS+ ACS
Sbjct: 225 IAGHARRCGTEKALELFQGMLRE------------GFRPSHFSYASLFGACSSTGFLEQG 272
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H ++IK G GNTL+D YA+ G + +RK+FD + ++D V+WNS++ YAQ+
Sbjct: 273 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 332
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EA+ F++M + ++ N ++ +VL A +H G+L G ++ + K +
Sbjct: 333 GFGNEAVCWFEEM-RRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWH 391
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+I+D+ + G ++ A + +M E W A++ MH
Sbjct: 392 YVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 434
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/636 (38%), Positives = 376/636 (59%), Gaps = 43/636 (6%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K NV SW +++ + G+ +E+L FS M + P TF +K+C L+ L G+Q
Sbjct: 35 KRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQ 94
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H GF V +++IDMYSKCG +++A +F+ +P +RN++SW +M+ GY
Sbjct: 95 IHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMP--VRNLISWNAMIAGYTVA 152
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHG 212
+AL+LF++ E GG F+D S L ACS + + EG H
Sbjct: 153 GFCEKALVLFQKM----QEVGG--------FLDEFTFTSTLKACS--DLGAIKEGNQIHA 198
Query: 213 FVIKRGFDSEV--GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
F+I GF V V LID Y + G + ++R+VF + EK ++W ++I YAQ G
Sbjct: 199 FLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNL 258
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
AE++++F Q+ +S+ ++ + LS+++ A +++ GK +H IK+ + V S
Sbjct: 259 AESMELFRQLRESS-IQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNS 317
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
I+DMY KCG ++ A + F++M +NV SWT MI GYG H +EA+ LF +M P+
Sbjct: 318 ILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPD 377
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+T+++VL CSH+GLV++G + + + I+ VEHY CMVDLLGRAG+LKEA +L+
Sbjct: 378 DVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLV 437
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
+ M ++A+ +W +LL ACR+H +++LG+ L L+ N +V++SNIYA+AG W+
Sbjct: 438 DSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSNIYADAGYWK 497
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL-QEV 569
+ ER R L+K+++L K G S VE+ +VH F GD HP EKI+E L+E+ ++ +E+
Sbjct: 498 ECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEILKEMERRMKEEL 557
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------------NLRVCGDCH 608
GYV + +HDV++E K LR+HSEKLA NLRVCGDCH
Sbjct: 558 GYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRVFKNLRVCGDCH 617
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+ +SK++ VVRD+ RFH F+DGLCSC DYW
Sbjct: 618 EFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 211/408 (51%), Gaps = 35/408 (8%)
Query: 103 GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
GF D+ +S+ LI MY KCG L A +FD + + RN+VSWT+++ G++QN N E+LL
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLK--RNVVSWTALMCGHIQNGNPLESLL 59
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE 222
LF + G S N F ++ L AC + + H +K GFD
Sbjct: 60 LFSKM--------GLSGVKPNDF----TFSTNLKACGLLNGLDIGRQIHDICVKTGFDMV 107
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
VGN++ID Y++ G ++ + +F+ M ++ ++WN++IA Y G +AL +F +M +
Sbjct: 108 NVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKM-Q 166
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV--IVGTSIIDMYCKCGQ 340
+ T ++ L A + LG ++ G IH +I SV V ++ID+Y KCG+
Sbjct: 167 EVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGK 226
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+ +AR+ F+ ++EK+V SWTA+I GY E+++LF ++ ++ ++ + S++
Sbjct: 227 LFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGV 286
Query: 401 CSHAGLVQEGWHWLNTMGHEFNIE--PGVEHYGC--MVDLLGRAGKLKEAYDLIEGMKVK 456
+ LVQ+G H F I+ GV+ C ++D+ + G + EA L M +
Sbjct: 287 FADFALVQQGKQM-----HAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPAR 341
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL-----EPNNCGYHVLL 499
+ + W ++ H LG+ A + E+ EP++ Y +L
Sbjct: 342 -NVISWTVMITGYGKH---GLGKEAIRLFDEMQLDSTEPDDVTYLAVL 385
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/630 (38%), Positives = 373/630 (59%), Gaps = 36/630 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGKQA 95
+V +WN+++A A G A+ M+ L P ST + + L G
Sbjct: 165 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSI 224
Query: 96 HQ---QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H +A + V + +AL+DMY+KC +L A ++F +P +RN V+W++++ G+V
Sbjct: 225 HAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMP--VRNDVTWSALIGGFV 282
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
D EA LFK+ L+E C F+ + ++AS L C+ + + H
Sbjct: 283 LCDRMTEAFNLFKDMLVE-GLC----------FLSATSVASALRVCASLADLHMGTQLHA 331
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ K G +++ N+L+ YA+ G ++ + FD + KD +++ ++++ QNG A E
Sbjct: 332 LIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEE 391
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A VF +M ++ +++ + T+ +++ A +HL L+ GKC H VI L + S+I
Sbjct: 392 AFLVFKKM-QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLI 450
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG++DL+R+ F++M ++V SW MIAGYG+H +EA LF M G P+ +
Sbjct: 451 DMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDV 510
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+ +++ACSH+GLV EG HW +TM H++ I P +EHY CMVDLL R G L EAY I+
Sbjct: 511 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQS 570
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M +KAD VWG+LLGACRIHKN+DLG+ ++ + +L P G VLLSNI++ AGR+++
Sbjct: 571 MPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEA 630
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R + K + K+PG+S +E+ G +HAF+ GD+ HP IY L+ + V ++++GY
Sbjct: 631 AEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQ 690
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D + V+ D+++EEKE L HSEKLA NLRVCGDCHT I+ +
Sbjct: 691 ADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYM 750
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ V +R I+VRD+ RFH+FK+G CSCG++W
Sbjct: 751 TLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 217/440 (49%), Gaps = 26/440 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
++N++I + G A+ + SM + + P + TFP +K+CSAL DL +G+ H A
Sbjct: 67 AYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHA 126
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G H D+FVS+ALID+Y +C AR +F ++P +R++V+W +ML GY +
Sbjct: 127 AAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP--MRDVVAWNAMLAGYANHGMYHH 184
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+ LL+ + GG N+ + S+L ++ H + ++
Sbjct: 185 AI----AHLLDMQDHGGLRPNAST-------LVSLLPLLAQHGALFQGTSIHAYCLRACL 233
Query: 220 DS---EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
+ +V +G L+D YA+ + + +VF GM ++ VTW+++I + EA ++
Sbjct: 234 EQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNL 293
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F M+ +A ++++ L A L L +G +H + K + + S++ MY
Sbjct: 294 FKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYA 353
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
K G ++ A F+++ K+ S+ A+++G + +A EA +F KM + P+ T VS
Sbjct: 354 KAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVS 413
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPG--VEHYGC--MVDLLGRAGKLKEAYDLIEG 452
++ ACSH +Q G H I G +E C ++D+ + GK+ + + +
Sbjct: 414 LIPACSHLAALQHG-----KCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDK 468
Query: 453 MKVKADFVVWGSLLGACRIH 472
M + D V W +++ IH
Sbjct: 469 MPAR-DVVSWNTMIAGYGIH 487
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 166/354 (46%), Gaps = 24/354 (6%)
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G+L+ AR++FD IP + ++ +++ Y A+ L++ L
Sbjct: 48 GQLALARQVFDRIPA--PDARAYNALIRAYSWLGPFHAAIDLYRSML------------R 93
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
V + VL ACS + H G +++ V LID Y R
Sbjct: 94 FRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGP 153
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R VF M +D V WN+++A YA +G+ A+ M ++ NA TL ++L +A
Sbjct: 154 ARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLA 213
Query: 302 HLGVLRLGKCIHDQVIKMDL---EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
G L G IH ++ L EE V++GT+++DMY KC Q+ A + F+ M +N +
Sbjct: 214 QHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVT 273
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA---CSHAGLVQEGWHWLN 415
W+A+I G+ + R EA +LF M+ G+ +++ SV SA C+ + G L+
Sbjct: 274 WSALIGGFVLCDRMTEAFNLFKDMLVEGL--CFLSATSVASALRVCASLADLHMGTQ-LH 330
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
+ + I + ++ + +AG + EA + + VK D + +G+LL C
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVK-DTISYGALLSGC 383
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 20/242 (8%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N T+F + + S+ ++++ + G + EA F M+ ++ P +T I +C
Sbjct: 359 NEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPAC 418
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
S L L GK +H I G + + ++LIDMY+KCG++ +R++FD++P R++VS
Sbjct: 419 SHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPA--RDVVS 476
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W +M+ GY + +EA LF L G A D V +++ACS +
Sbjct: 477 WNTMIAGYGIHGLGKEATTLF----LGMKNQGFAP--------DDVTFICLIAACSHSGL 524
Query: 204 NGVTEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNS 259
VTEG H F K G + ++D ARGG +D + + M ++ D W +
Sbjct: 525 --VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGA 582
Query: 260 II 261
++
Sbjct: 583 LL 584
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
++ + GQ+ LAR+ F+++ + R++ A+I Y A+DL+ M++ V PN
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
TF VL ACS ++ G ++ + + ++DL R + A ++
Sbjct: 101 YTFPFVLKACSALVDLRAG-RTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFA 159
Query: 452 GMKVKADFVVWGSLLGACRIH 472
M ++ D V W ++L H
Sbjct: 160 KMPMR-DVVAWNAMLAGYANH 179
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/630 (38%), Positives = 373/630 (59%), Gaps = 36/630 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGKQA 95
+V +WN+++A A G A+ M+ L P ST + + L G
Sbjct: 165 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSI 224
Query: 96 HQ---QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H +A + V + +AL+DMY+KC +L A ++F +P +RN V+W++++ G+V
Sbjct: 225 HAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMP--VRNDVTWSALIGGFV 282
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
D EA LFK+ L+E C F+ + ++AS L C+ + + H
Sbjct: 283 LCDRMTEAFNLFKDMLVE-GLC----------FLSATSVASALRVCASLADLHMGTQLHA 331
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ K G +++ N+L+ YA+ G ++ + FD + KD +++ ++++ QNG A E
Sbjct: 332 LIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEE 391
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A VF +M ++ +++ + T+ +++ A +HL L+ GKC H VI L + S+I
Sbjct: 392 AFLVFKKM-QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLI 450
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG++DL+R+ F++M ++V SW MIAGYG+H +EA LF M G P+ +
Sbjct: 451 DMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDV 510
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+ +++ACSH+GLV EG HW +TM H++ I P +EHY CMVDLL R G L EAY I+
Sbjct: 511 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQS 570
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M +KAD VWG+LLGACRIHKN+DLG+ ++ + +L P G VLLSNI++ AGR+++
Sbjct: 571 MPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEA 630
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R + K + K+PG+S +E+ G +HAF+ GD+ HP IY L+ + V ++++GY
Sbjct: 631 AEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQ 690
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D + V+ D+++EEKE L HSEKLA NLRVCGDCHT I+ +
Sbjct: 691 ADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYM 750
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ V +R I+VRD+ RFH+FK+G CSCG++W
Sbjct: 751 TLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 217/440 (49%), Gaps = 26/440 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
++N++I + G A+ + SM + + P + TFP +K+CSAL DL +G+ H A
Sbjct: 67 AYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHA 126
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G H D+FVS+ALID+Y +C AR +F ++P +R++V+W +ML GY +
Sbjct: 127 AAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP--MRDVVAWNAMLAGYANHGMYHH 184
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+ LL+ + GG N+ + S+L ++ H + ++
Sbjct: 185 AI----AHLLDMQDHGGLRPNAST-------LVSLLPLLAQHGALFQGTSIHAYCLRACL 233
Query: 220 DS---EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
+ +V +G L+D YA+ + + +VF GM ++ VTW+++I + EA ++
Sbjct: 234 EQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNL 293
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F M+ +A ++++ L A L L +G +H + K + + S++ MY
Sbjct: 294 FKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYA 353
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
K G ++ A F+++ K+ S+ A+++G + +A EA +F KM + P+ T VS
Sbjct: 354 KAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVS 413
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPG--VEHYGC--MVDLLGRAGKLKEAYDLIEG 452
++ ACSH +Q G H I G +E C ++D+ + GK+ + + +
Sbjct: 414 LIPACSHLAALQHG-----KCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDK 468
Query: 453 MKVKADFVVWGSLLGACRIH 472
M + D V W +++ IH
Sbjct: 469 MPAR-DVVSWNTMIAGYGIH 487
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 166/354 (46%), Gaps = 24/354 (6%)
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G+L+ AR++FD IP + ++ +++ Y A+ L++ L
Sbjct: 48 GQLALARQVFDRIPA--PDARAYNALIRAYSWLGPFHAAIDLYRSML------------R 93
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
V + VL ACS + H G +++ V LID Y R
Sbjct: 94 FRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGP 153
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R VF M +D V WN+++A YA +G+ A+ M ++ NA TL ++L +A
Sbjct: 154 ARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLA 213
Query: 302 HLGVLRLGKCIHDQVIKMDL---EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
G L G IH ++ L EE V++GT+++DMY KC Q+ A + F+ M +N +
Sbjct: 214 QHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVT 273
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA---CSHAGLVQEGWHWLN 415
W+A+I G+ + R EA +LF M+ G+ +++ SV SA C+ + G L+
Sbjct: 274 WSALIGGFVLCDRMTEAFNLFKDMLVEGL--CFLSATSVASALRVCASLADLHMGTQ-LH 330
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
+ + I + ++ + +AG + EA + + VK D + +G+LL C
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVK-DTISYGALLSGC 383
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 20/243 (8%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N T+F + + S+ ++++ + G + EA F M+ ++ P +T I +C
Sbjct: 359 NEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPAC 418
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
S L L GK +H I G + + ++LIDMY+KCG++ +R++FD++P R++VS
Sbjct: 419 SHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPA--RDVVS 476
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W +M+ GY + +EA LF L G A D V +++ACS +
Sbjct: 477 WNTMIAGYGIHGLGKEATTLF----LGMKNQGFAP--------DDVTFICLIAACSHSGL 524
Query: 204 NGVTEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNS 259
VTEG H F K G + ++D ARGG +D + + M ++ D W +
Sbjct: 525 --VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGA 582
Query: 260 IIA 262
++
Sbjct: 583 LLG 585
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
GQ+ LAR+ F+++ + R++ A+I Y A+DL+ M++ V PN TF VL
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
ACS ++ G ++ + + ++DL R + A ++ M ++ D
Sbjct: 108 KACSALVDLRAG-RTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMR-D 165
Query: 459 FVVWGSLLGACRIH 472
V W ++L H
Sbjct: 166 VVAWNAMLAGYANH 179
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/629 (38%), Positives = 369/629 (58%), Gaps = 68/629 (10%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D N+F +N++I LA ++ F M +LS+ P R T P +KS +AL D+ G+
Sbjct: 99 DHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGR 158
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H G D FV +L+DMY K GEL +LFDE PQR
Sbjct: 159 CLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQR---------------- 202
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N E++LL+ NV ++ C +V +++ A F
Sbjct: 203 --NKAESILLW------------------NVLIN---------GCCKV--GDLSKAASLF 231
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+ G N+LI+ + R G +D +R++F M EK+ V+W ++I ++QNG +A
Sbjct: 232 EAMP--ERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKA 289
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L +F +M++ V+ N +T+ + LLA +G L++G+ IH+ + + + +GT+++D
Sbjct: 290 LSMFWRMLEE-GVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVD 348
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY KCG + A + F + K K++ +W+ MI G+ +H +AL F KM AG+ P+ +
Sbjct: 349 MYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVI 408
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
F+++L+ACSH+G V +G ++ +M +++IEP ++HY +VDLLGRAG+L EA I+ M
Sbjct: 409 FLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSM 468
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
+ DFV+WG+L ACR HKN+++ E+ A+KL +LEP + G +V LSN+YA GRWEDVE
Sbjct: 469 PINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVE 528
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
R R+LMKNR + K PG+S +E+ G+VH+F+ GD H + E+I LEE+ ++ GY+
Sbjct: 529 RVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMP 588
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
+ V+H++++EEKE L HSEKLA NLRVCGDCH++++ S
Sbjct: 589 ETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYAS 648
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
K+ REI++RD KRFH+FKDG CSCGDYW
Sbjct: 649 KLSRREIILRDIKRFHHFKDGTCSCGDYW 677
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 153/370 (41%), Gaps = 84/370 (22%)
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
G S + + F+ + ++ L ++ H + S V LI +
Sbjct: 34 GPSRSPETHFIPLIHASNTLPQLHQI---------HAQIFLHNLFSNSRVVTQLISSSCS 84
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
+D + +F + +N++I A+N ++ F M++ + ++ + +TL
Sbjct: 85 LKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLS-IRPDRLTLPF 143
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV-------------- 341
VL ++A L + LG+C+H V+K+ LE V S++DMY K G++
Sbjct: 144 VLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRN 203
Query: 342 -------------------DLARKA--FNQMKEKNVRSWTAMIAGY---GMHCRARE--- 374
DL++ A F M E+N SW ++I G+ G RARE
Sbjct: 204 KAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFV 263
Query: 375 -------------------------ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
AL +F++M++ GVRPN +T VS L AC+ G +Q
Sbjct: 264 QMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQV 323
Query: 410 G---WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
G ++L++ G + N G +VD+ + G +K A + K K D + W ++
Sbjct: 324 GERIHNYLSSNGFQLNRGIGT----ALVDMYAKCGNIKSASRVFVETKGK-DLLTWSVMI 378
Query: 467 GACRIHKNVD 476
IH D
Sbjct: 379 WGWAIHGCFD 388
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 21/238 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF + +KN V SW ++I ++ GD +AL F M + + P T A+ +C+ +
Sbjct: 261 LFVQMPEKN-VVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIG 319
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G++ H GF + + +AL+DMY+KCG + A ++F E + +++++W+ M
Sbjct: 320 ALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVE--TKGKDLLTWSVM 377
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + +AL F + S + D V ++L+ACS V
Sbjct: 378 IWGWAIHGCFDQALQCFVKM------------KSAGINPDEVIFLAILTACSH--SGNVD 423
Query: 208 EGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
+G + F R + + ++D R G +D + M I D V W ++
Sbjct: 424 QGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALF 481
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 248/654 (37%), Positives = 378/654 (57%), Gaps = 37/654 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
S V S V + N + ++ NN N +I L +GG+ +AL
Sbjct: 23 SHVSSRVPVSFVSLNPSANLINDINSNN----NQLIQSLCKGGNLKQALHLLCC----EP 74
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
PT+ TF I SC+ + L G H+ GF +D F+++ LI+MY + G + A K
Sbjct: 75 NPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALK 134
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FDE R R I W ++ + +E L L+ ++ + G S+ +V
Sbjct: 135 VFDE--TRERTIYVWNALFRALAMVGHGKELLDLY----IQMNWIGTPSDRFTYTYVLKA 188
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
+ S LS C + H +++ G+++ + V TL+D YA+ G V + VF M
Sbjct: 189 CVVSELSVCPLRKGKEI----HAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAM 244
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFD-QMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
K+ V+W+++IA +A+N + +AL++F M ++ + N+VT+ +L A A L L
Sbjct: 245 PTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQ 304
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK IH +++ L+ + V ++I MY +CG+V + ++ F+ MK+++V SW ++I+ YGM
Sbjct: 305 GKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGM 364
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H ++A+ +F MI GV P+YI+F++VL ACSHAGLV+EG +M ++ I PG+E
Sbjct: 365 HGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGME 424
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HY CMVDLLGRA +L EA LIE M + VWGSLLG+CRIH NV+L E A+ LFEL
Sbjct: 425 HYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFEL 484
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
EP N G +VLL++IYA A W + + L++ R L K PG S +E++ KV++F+ D+
Sbjct: 485 EPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEH 544
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
+PQ E+I+ L +L+ +++ GYV V++D+D+EEKE + HSEKLA
Sbjct: 545 NPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTA 604
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH V + ISK +REI+VRD RFH+F+DG+CSCGDYW
Sbjct: 605 KGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/585 (38%), Positives = 355/585 (60%), Gaps = 35/585 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+ +C L G++ H + ++ + L+ Y KC L DARK+ DE+P++
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK-- 116
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+VSWT+M++ Y Q ++ EAL +F E + S+ N F A+VL++C
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMM--------RSDGKPNEFT----FATVLTSCI 164
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
R + G+ + HG ++K +DS + VG++L+D YA+ G + +R++F+ + E+D V+ +
Sbjct: 165 RASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTA 224
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
IIA YAQ GL EAL++F ++ S + N VT +++L A++ L +L GK H V++
Sbjct: 225 IIAGYAQLGLDEEALEMFHRL-HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRR 283
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
+L ++ S+IDMY KCG + AR+ F+ M E+ SW AM+ GY H RE L+LF
Sbjct: 284 ELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF 343
Query: 380 YKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM-GHEFNIEPGVEHYGCMVDLL 437
M + V+P+ +T ++VLS CSH + G + + M E+ +PG EHYGC+VD+L
Sbjct: 344 RLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDML 403
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GRAG++ EA++ I+ M K V GSLLGACR+H +VD+GE ++L E+EP N G +V
Sbjct: 404 GRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYV 463
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
+LSN+YA+AGRW DV R++M + + K PG S ++ +H F D+ HP+ E++
Sbjct: 464 ILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLA 523
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
++E+++K+++ GYV D++ V++DVD+E+KE L HSEKLA
Sbjct: 524 KMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFK 583
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH ++ SKV +RE+ +RD RFH DG+CSCGDYW
Sbjct: 584 NLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 182/350 (52%), Gaps = 23/350 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW ++I+ ++ G S EAL F+ M + P TF + SC L G
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H + + +FV S+L+DMY+K G++ +AR++F+ +P+ R++VS T+++ GY
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE--RDVVSCTAIIAGYA 230
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q EAL +F +S+ + + V AS+L+A S + + + AH
Sbjct: 231 QLGLDEEALEMFHRL------------HSEGMSPNYVTYASLLTALSGLALLDHGKQAHC 278
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V++R + N+LID Y++ G++ +R++FD M E+ A++WN+++ Y+++GL E
Sbjct: 279 HVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGRE 338
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS-- 330
L++F M VK +AVTL AVL +H + G I D ++ E GT
Sbjct: 339 VLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAG--EYGTKPGTEHY 396
Query: 331 --IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
I+DM + G++D A + +M K + G CR ++D+
Sbjct: 397 GCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGA---CRVHLSVDI 443
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 250/661 (37%), Positives = 382/661 (57%), Gaps = 57/661 (8%)
Query: 22 NTNLTT---LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM---RKLSLTPTRST 75
N NL+ LFN+ +K+ V SWN++++ A+ G EA + F M ++S S
Sbjct: 135 NGNLSAARALFNQMPEKD-VVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSA 193
Query: 76 FPCAIKSCSALHDLHSGK-QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
+ + +G+ + ++ F ++ + L+ Y + L DAR LFD +
Sbjct: 194 Y------------VQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRM 241
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE-----SECGGASENSDNVFVDSV 189
P +R+ +SW M+TGY QN EA LF+E + + + G +N + ++
Sbjct: 242 P--VRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNG--MLDEAT 297
Query: 190 AIASVLSACSRVTVNGVTEG-AHGFVIKRG---FDS----EVGVGNTLIDAYARGGHVDV 241
I + + V+ N + G I++ FD NT++ YA+ G++D
Sbjct: 298 RIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQ 357
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
++ +FD M ++D ++W ++I+ YAQ+G + EAL +F +M + + N L+ L + A
Sbjct: 358 AKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI-LNRSALACALSSCA 416
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+ L LGK +H +++K + I G +++ MY KCG ++ A F + EK++ SW
Sbjct: 417 EIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNT 476
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MIAGY H +EAL LF M K ++P+ +T V VLSACSH GLV +G + N+M +
Sbjct: 477 MIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNY 535
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
I +HY CM+DLLGRAG+L EA +L++ M D WG+LLGA RIH + +LGE A
Sbjct: 536 GITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKA 595
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
A+K+FE+EP+N G +VLLSN+YA +GRW +V RS M+++ + K PG+S VE++ K H
Sbjct: 596 AEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHI 655
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
F VGD HP+ E+IY YLEEL+++L++ G+V+ V+HDV++EEKE L+ HSEKLA
Sbjct: 656 FTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVA 715
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
NLRVC DCH I+ ISK+ R+I+VRDS RFH+F +G CSCGDY
Sbjct: 716 FGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDY 775
Query: 644 W 644
W
Sbjct: 776 W 776
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 213/476 (44%), Gaps = 88/476 (18%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTP---------TRSTFPCAIKSCSAL 86
+++ WN I+ R G AL F+ MR+ S + + F CA K +
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D RD+ + ++ Y K G LS AR LF+++P+ +++VSW +
Sbjct: 118 PD-----------------RDLISWNVMLSGYVKNGNLSAARALFNQMPE--KDVVSWNA 158
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
ML+G+ QN EA +F + L++ + ++ +LSA NG
Sbjct: 159 MLSGFAQNGFVEEARKIFDQMLVK----------------NEISWNGLLSA---YVQNGR 199
Query: 207 TEGAHGFVIKRGFDS----EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
E A +R FDS E+ N L+ Y R +D +R +FD M +D ++WN +I
Sbjct: 200 IEDA-----RRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMIT 254
Query: 263 IYAQNGLAAEALDVFDQMV---------------------KSTDV-----KCNAVTLSAV 296
YAQNGL +EA +F+++ ++T + + N V+ +A+
Sbjct: 255 GYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAM 314
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
+ + + + DQ+ + +++ Y +CG +D A+ F++M +++
Sbjct: 315 IAGYVQSQQIEKARELFDQMPSRNTSS----WNTMVTGYAQCGNIDQAKILFDEMPQRDC 370
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW AMI+GY ++ EAL LF KM + G N LS+C+ ++ G L+
Sbjct: 371 ISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQ-LHG 429
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ + G ++ + G+ G ++EA+D+ E + K D V W +++ H
Sbjct: 430 RLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEK-DIVSWNTMIAGYARH 484
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 164/371 (44%), Gaps = 65/371 (17%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M +SS +++V+ + LF++ + + + SW ++I+ A+ G S EAL
Sbjct: 334 MPSRNTSSWNTMVTGYAQCGNIDQAKILFDE-MPQRDCISWAAMISGYAQSGQSEEALHL 392
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F M++ RS CA+ SC+ + L GKQ H + GF +AL+ MY K
Sbjct: 393 FIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGK 452
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG + +A +F++I + ++IVSW +M+ GY ++ +EAL LF+ +
Sbjct: 453 CGSIEEAFDVFEDITE--KDIVSWNTMIAGYARHGFGKEALALFESMKM----------- 499
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+ D V + VLSACS G VD
Sbjct: 500 --TIKPDDVTLVGVLSACSHT-----------------------------------GLVD 522
Query: 241 VSRKVFDGMIEKDAVTWNS-----IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
+ F+ M + +T N+ +I + + G EAL+ ++KS +A T A
Sbjct: 523 KGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALN----LMKSMPFYPDAATWGA 578
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
+L A G LG+ ++V +M+ + S + + ++Y G+ R+ ++M++K
Sbjct: 579 LLGASRIHGDTELGEKAAEKVFEMEPDNSGMY-VLLSNLYAASGRWREVREMRSKMRDKG 637
Query: 356 VRSWTAMIAGY 366
V+ + GY
Sbjct: 638 VKK----VPGY 644
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 145/300 (48%), Gaps = 24/300 (8%)
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V ++ D ++ N ++ Y + G++ +R +F+ M EKD V+WN++++ +AQNG EA
Sbjct: 113 VFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEA 172
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+FDQM+ VK N ++ + +L A G + + + D KMD E ++ ++
Sbjct: 173 RKIFDQML----VK-NEISWNGLLSAYVQNGRIEDARRLFDS--KMDWE--IVSWNCLMG 223
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
Y + ++D AR F++M ++ SW MI GY + EA LF ++ V
Sbjct: 224 GYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDV----FA 279
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
+ +++S G++ E M + + + M+ ++ ++++A +L + M
Sbjct: 280 WTAMVSGFVQNGMLDEATRIFEEMPEKNEVS-----WNAMIAGYVQSQQIEKARELFDQM 334
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF-ELEPNNCGYHVLLSNIYANAGRWEDV 512
+ + W +++ N+D AK LF E+ +C + + YA +G+ E+
Sbjct: 335 PSR-NTSSWNTMVTGYAQCGNID----QAKILFDEMPQRDCISWAAMISGYAQSGQSEEA 389
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 27/244 (11%)
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
+++ D V WN I+ Y + G AL VF+ M + + V NA+ G L
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMI----------SGYLSN 104
Query: 309 GK--CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
K C KM + +I ++ Y K G + AR FNQM EK+V SW AM++G+
Sbjct: 105 NKFDCARKVFEKMP-DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGF 163
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ EA +F +M+ N I++ +LSA G +++ ++ ++
Sbjct: 164 AQNGFVEEARKIFDQMLV----KNEISWNGLLSAYVQNGRIEDARRLFDS-----KMDWE 214
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
+ + C++ R +L +A L + M V+ D + W ++ +N L E A++LF
Sbjct: 215 IVSWNCLMGGYVRKKRLDDARSLFDRMPVR-DKISWNIMITG--YAQNGLLSE--ARRLF 269
Query: 487 ELEP 490
E P
Sbjct: 270 EELP 273
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/630 (38%), Positives = 357/630 (56%), Gaps = 39/630 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V +WNS+I+ + S EA F M+ R TF + +C +L GK
Sbjct: 75 SVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVR 134
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+ F D+FV +ALI MY++C +A ++F + Q+ N+++W++++T + + +
Sbjct: 135 ESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQK--NLITWSAIITAFADHGH 192
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFV 214
EAL F+ + + + V S+L+ + T +G+ E + H +
Sbjct: 193 CGEALRYFRMM------------QQEGILPNRVTFISLLNGFT--TPSGLEELSRIHLLI 238
Query: 215 IKRGFDSEVGVGNTLIDAYAR--GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ G D + N L++ Y R G +DV+ + M E+ WN +I Y +G + E
Sbjct: 239 TEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSRE 298
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL+ + Q ++ + + VT +VL A L GK IH ++ L+ VIV ++
Sbjct: 299 ALETY-QRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALT 357
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+MY KCG ++ AR+ F+ M ++ SW M+ Y H + E L L KM + GV+ N I
Sbjct: 358 NMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGI 417
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TFVSVLS+CSHAGL+ EG + +++GH+ IE EHYGC+VDLLGRAGKL+EA I
Sbjct: 418 TFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISK 477
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M + + V W SLLGACR+HK++D G++AA+KL EL+P N V+LSNIY+ G W++
Sbjct: 478 MPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNA 537
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+ R M +RR+ K PG S ++++ KVH F V D HP+ +IY+ +EEL ++E GYV
Sbjct: 538 AKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYV 597
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D V+HDVD+E+KE L HSEKLA NLRVC DCHT + I
Sbjct: 598 PDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFI 657
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+ REIVVRD+ RFH+F+DG CSC DYW
Sbjct: 658 SKITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 196/374 (52%), Gaps = 31/374 (8%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
DVFV++AL++ Y+KCG L+DARK+FD +P R++ +W SM++ Y ++ + EA +F+
Sbjct: 44 DVFVNTALVNTYTKCGSLTDARKVFDGMP--CRSVGTWNSMISAYSISERSGEAFFIFQR 101
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH--GFVIKRGFDSEVG 224
E C D V S+L AC V + G H + + F+ ++
Sbjct: 102 MQHEGERC------------DRVTFLSILDAC--VNPENLQHGKHVRESISETSFELDLF 147
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
VG LI YAR + + +VF M +K+ +TW++II +A +G EAL F +M++
Sbjct: 148 VGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYF-RMMQQE 206
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY--CKCGQVD 342
+ N VT ++L L IH + + L+++ + +++++Y C+ G++D
Sbjct: 207 GILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELD 266
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
+A +M E+ + +W +I GY +H R+REAL+ + ++ + + +TF+SVL+AC+
Sbjct: 267 VAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACT 326
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
+ + EG M H +E G++ + ++ + G ++ A + + M +++
Sbjct: 327 SSTSLAEG-----KMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSA 381
Query: 459 FVVWGSLLGACRIH 472
V W +L A H
Sbjct: 382 -VSWNGMLQAYAQH 394
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 176/362 (48%), Gaps = 32/362 (8%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N +F + KN + +W+++I A G EALR F M++ + P R TF +
Sbjct: 164 NAAQVFGRMKQKN-LITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGF 222
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC--GELSDARKLFDEIPQRIRNI 141
+ L + H G +S+AL+++Y +C GEL A + E+ + + I
Sbjct: 223 TTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDE--QQI 280
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
+W ++ GY + +REAL ++ LE + VD V SVL+AC+
Sbjct: 281 TAWNVLINGYTLHGRSREALETYQRLQLEA------------IPVDKVTFISVLNACTSS 328
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSII 261
T + H ++ G DS+V V N L + Y++ G ++ +R++FD M + AV+WN ++
Sbjct: 329 TSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGML 388
Query: 262 AIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-----KCIHDQV 316
YAQ+G + E L + +M + VK N +T +VL + +H G++ G HD+
Sbjct: 389 QAYAQHGESEEVLKLIRKM-EQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRG 447
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREA 375
I++ E ++D+ + G++ A K ++M E + +W +++ CR +
Sbjct: 448 IEVKTEHY----GCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGA----CRVHKD 499
Query: 376 LD 377
LD
Sbjct: 500 LD 501
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 183/403 (45%), Gaps = 62/403 (15%)
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+V V L++ Y + G + +RKVFDGM + TWNS+I+ Y+ + + EA +F +M
Sbjct: 44 DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 103
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ +C+ VT ++L A + L+ GK + + + + E + VGT++I MY +C
Sbjct: 104 HEGE-RCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSP 162
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ A + F +MK+KN+ +W+A+I + H EAL F M + G+ PN +TF+S+L+
Sbjct: 163 ENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGF 222
Query: 402 S-----------HAGLVQEGWHWLNTMGH------------EFNI---------EPGVEH 429
+ H + + G TM + E ++ E +
Sbjct: 223 TTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITA 282
Query: 430 YGCMVD---LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
+ +++ L GR+ + E Y ++ + D V + S+L AC +A K+
Sbjct: 283 WNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNAC-----TSSTSLAEGKMI 337
Query: 487 ELEPNNCGYHV------LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
CG L+N+Y+ G E+ R M P S V G +
Sbjct: 338 HSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSM--------PIRSAVSWNGMLQ 389
Query: 541 AFLVGDKEHPQHE---KIYEYLEELNVKLQEVGYVTDMTSVIH 580
A+ +H + E K+ +E+ VKL + +V+ ++S H
Sbjct: 390 AY----AQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSH 428
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 15/261 (5%)
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
VK N +T VL ++ LR GK IH V + + V V T++++ Y KCG + AR
Sbjct: 6 VKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDAR 65
Query: 346 KAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
K F+ M ++V +W +MI+ Y + R+ EA +F +M G R + +TF+S+L AC +
Sbjct: 66 KVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPE 125
Query: 406 LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
+Q G H ++ E + E + ++ + R + A + MK K + + W ++
Sbjct: 126 NLQHGKHVRESIS-ETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQK-NLITWSAI 183
Query: 466 LGACRIHKNVDLGEIAAKKLFELE------PNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
+ A H + GE A + F + PN + LL+ +G E++ R L+
Sbjct: 184 ITAFADHGHC--GE--ALRYFRMMQQEGILPNRVTFISLLNGFTTPSG-LEELSRIHLLI 238
Query: 520 KNRRLAKTPGFS--LVELRGK 538
L T S LV + G+
Sbjct: 239 TEHGLDDTTTMSNALVNVYGR 259
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 248/639 (38%), Positives = 374/639 (58%), Gaps = 43/639 (6%)
Query: 29 FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD 88
FN N+ + N +I L + G+ +AL S PT+ T I S + +
Sbjct: 31 FNPSTPPNS--NNNHLIQSLCKQGNLKQALYLLSH----ESNPTQQTCELLILSAARRNS 84
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L HQ GF +D F+++ LI+M+S+ + +ARK+FD+ R R I W ++
Sbjct: 85 LSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKT--RKRTIYVWNALF 142
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC--SRVTVNGV 206
+ L L+ N V D +L AC S V+ +
Sbjct: 143 RALALAGRGNDVLELYPRM------------NMMGVSSDRFTYTYLLKACVASECLVSFL 190
Query: 207 TEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
+G H +++ G+ + V V TL+D YAR G V + VFD M K+ V+W+++IA Y
Sbjct: 191 QKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACY 250
Query: 265 AQNGLAAEALDVFDQMVKST-DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
A+NG EAL++F +M+ +T D N+VT+ +VL A A L GK IH +++ L+
Sbjct: 251 AKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDS 310
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ V +++I MY +CG+++ + F++M +K+V W ++I+ YG+H R+A+ +F +MI
Sbjct: 311 ILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMI 370
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
G P++I+F+SVL ACSH GLV+EG +M E I+P VEHY CMVDLLGRA +L
Sbjct: 371 DHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRL 430
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
EA +IE ++++ VWGSLLGACRIH +V+L E A+K+LF+LEP N G +VLL++IY
Sbjct: 431 DEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIY 490
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A A W++V+R + L+ +R L K PG S +E+R K+++F D+ +PQ E+++ L L+
Sbjct: 491 AEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLS 550
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
++++ GY V++D+DQEEKE + HSEKLA NLR+C
Sbjct: 551 NEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCE 610
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH+V + ISK DREI+VRD RFH+FKDG+CSCGDYW
Sbjct: 611 DCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 266/730 (36%), Positives = 381/730 (52%), Gaps = 127/730 (17%)
Query: 28 LFNKYVDKNNVFSWNSVI-ADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+FN ++ N F+WN+++ A L +AL + P T+P ++ C+A
Sbjct: 60 IFN-HLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAAR 118
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS--------------------------- 119
G+Q H A GF DV+V + L+++Y+
Sbjct: 119 VSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLL 178
Query: 120 ----KCGELSDARKLFDEIPQR-------------------------------IRNIVSW 144
+ GE+ +A ++F+ +P+R R++VSW
Sbjct: 179 AGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSW 238
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++M++ Y QN+ EAL+LF E V VD V + S LSACSRV
Sbjct: 239 SAMVSCYEQNEMGEEALVLFVEM------------KGSGVAVDEVVVVSALSACSRVLNV 286
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD----------------- 247
+ HG +K G + V + N LI Y+ G + +R++FD
Sbjct: 287 EMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISG 346
Query: 248 ---------------GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
M EKD V+W+++I+ YAQ+ +EAL +F +M + V+ +
Sbjct: 347 YLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEM-QLHGVRPDETA 405
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
L + + A HL L LGK IH + + L+ +VI+ T++IDMY KCG V+ A + F M+
Sbjct: 406 LVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAME 465
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
EK V +W A+I G M+ ++L++F M K G PN ITF+ VL AC H GLV +G H
Sbjct: 466 EKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRH 525
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ N+M HE IE ++HYGCMVDLLGRAG LKEA +LI+ M + D WG+LLGACR H
Sbjct: 526 YFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKH 585
Query: 473 KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSL 532
++ ++GE +KL +L+P++ G+HVLLSNIYA+ G W +V R +M + KTPG S+
Sbjct: 586 RDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSM 645
Query: 533 VELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLR 592
+E G VH FL GDK HPQ I L+ + KL+ GYV + V D+D+EEKE L
Sbjct: 646 IEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDEEEKETALF 705
Query: 593 IHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFK 634
HSEKLA NLR+C DCHTV++LISK DR+IVVRD RFH+FK
Sbjct: 706 RHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFK 765
Query: 635 DGLCSCGDYW 644
G CSC D+W
Sbjct: 766 HGACSCMDFW 775
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 16/243 (6%)
Query: 242 SRKVFDGMIEKDAVTWNSIIA--IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
S ++F+ + + TWN+I+ +Y QN L ++ ++ K ++ T +L
Sbjct: 57 SLRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHY--KLFLASHAKPDSYTYPILLQC 114
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A G+ +H + + V V +++++Y CG V AR+ F + ++ SW
Sbjct: 115 CAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSW 174
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM-G 418
++AGY EA +F M + N I S+++ G V++ N + G
Sbjct: 175 NTLLAGYVQAGEVEEAERVFEGMPER----NTIASNSMIALFGRKGCVEKARRIFNGVRG 230
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK---VKADFVVWGSLLGACRIHKNV 475
E ++ + MV + +EA L MK V D VV S L AC NV
Sbjct: 231 RERDMVS----WSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNV 286
Query: 476 DLG 478
++G
Sbjct: 287 EMG 289
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/599 (39%), Positives = 365/599 (60%), Gaps = 42/599 (7%)
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
S++ L +T+ IK C + +H G + + G +F+ + LI+MY K
Sbjct: 3 SLQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFN 62
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
L+DA +LFD++PQR N++SWT+M++ Y + ++AL L L D
Sbjct: 63 LLNDAHQLFDQMPQR--NVISWTTMISAYSKCKIHQKALELLVLML------------RD 108
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTE--GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
V + +SVL AC NG+++ H +IK G +S+V V + LID +A+ G +
Sbjct: 109 GVRPNVYTYSSVLRAC-----NGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPE 163
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+ VFD M+ DA+ WNSII +AQN + AL++F +M ++ + A TL++VL A
Sbjct: 164 DALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA-TLTSVLRAC 222
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
L +L LG H ++K D + +I+ +++DMYCKCG ++ AR+ FNQMKE++V +W+
Sbjct: 223 TGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWS 280
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
MI+G + ++EAL LF M +G +PNYIT V VL ACSHAGL+++GW++ +M
Sbjct: 281 TMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKL 340
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
+ I PG EHYGCM+DLLG+AGKL +A L+ M+ + D V W +LLGACR+ +N+ L E
Sbjct: 341 YGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEY 400
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
AAKK+ L+P + G + +LSNIYAN+ +W+ VE R M++ + K PG S +E+ ++H
Sbjct: 401 AAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIH 460
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA- 599
AF++GD+ HPQ ++ + L +L +L +GYV + V+ D++ E+ E +LR HSEKLA
Sbjct: 461 AFIIGDESHPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLAL 520
Query: 600 -----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLR+CGDCH +L SK+ +R IV+RD R+H+F+DG CSCG
Sbjct: 521 AFGLMTLPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSCG 579
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 134/260 (51%), Gaps = 29/260 (11%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
S+++ K + ++F++ V + + WNS+I A+ S AL F M++
Sbjct: 150 SALIDVFAKLGEPEDALSVFDEMVTGDAIV-WNSIIGGFAQNSRSDVALELFKRMKRAGF 208
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
++T +++C+ L L G QAH I + +D+ +++AL+DMY KCG L DAR+
Sbjct: 209 IAEQATLTSVLRACTGLALLELGMQAH--VHIVKYDQDLILNNALVDMYCKCGSLEDARR 266
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F+++ + R++++W++M++G QN ++EAL LF+ L++ S G N +
Sbjct: 267 VFNQMKE--RDVITWSTMISGLAQNGYSQEALKLFE--LMKSS---GTKPN-------YI 312
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVG------NTLIDAYARGGHVDVSR 243
I VL ACS G+ E G+ R G+ +ID + G +D +
Sbjct: 313 TIVGVLFACSHA---GLLED--GWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAV 367
Query: 244 KVFDGM-IEKDAVTWNSIIA 262
K+ + M E DAVTW +++
Sbjct: 368 KLLNEMECEPDAVTWRTLLG 387
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 3/168 (1%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ +++ V +W+++I+ LA+ G S EAL+ F M+ P T + +CS
Sbjct: 267 VFNQMKERD-VITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAG 325
Query: 88 DLHSG-KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G ++G + +ID+ K G+L DA KL +E+ + V+W +
Sbjct: 326 LLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECE-PDAVTWRT 384
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
+L N A K+ + + E G N++ +S SV
Sbjct: 385 LLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSV 432
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/587 (41%), Positives = 355/587 (60%), Gaps = 36/587 (6%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
F ++ SC L + +Q H Q G R++ V++ L+ MY + G L DA++LFD +
Sbjct: 56 FRSSLLSCRNLFQV---RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMS 112
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+R + SW+ ++ GY + N +F+E L GA +D + V+
Sbjct: 113 KR--HPYSWSVIVGGYAKVGNFFSCFWMFRELLRS-----GAP-------LDDYSAPVVI 158
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
AC + H +K G D V TL+D YAR V+ + ++F M ++D
Sbjct: 159 RACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLA 218
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
TW +I A++G+ E+L FD+M ++ + + V L V+ A A LG + K IH
Sbjct: 219 TWTVMIGALAESGVPVESLVFFDRM-RNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAY 277
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+ VI+GT++IDMY KCG V+ AR F++M+ +NV +W+AMIA YG H + +A
Sbjct: 278 INGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKA 337
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
L+LF M+++G+ PN ITFVS+L ACSHAGL++EG + ++M E+ + P V+HY CMVD
Sbjct: 338 LELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVD 397
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY 495
LLGRAG+L EA ++IEGM V+ D V+WG+LLGACRIH+++DL E A+ L +L+ G+
Sbjct: 398 LLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGH 457
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
+VLLSNIYANAG+WED+ +TR LM L K PG + +E+ K++ F VGDK HP+ +I
Sbjct: 458 YVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEI 517
Query: 556 YEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------- 599
Y+ L+ L KL+ GY D V++DVD+E K+ L HSEKLA
Sbjct: 518 YKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRI 577
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCHT + +S + + I+VRD+KRFH+FK+G+CSC DYW
Sbjct: 578 TKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 170/348 (48%), Gaps = 21/348 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K + +SW+ ++ A+ G+ F + + + P I++C L DL G
Sbjct: 111 MSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCG 170
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H G FV + L+DMY++C + DA ++F ++ + R++ +WT M+
Sbjct: 171 RLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWK--RDLATWTVMIGALA 228
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
++ E+L+ F + + D VA+ +V+ AC+++ + H
Sbjct: 229 ESGVPVESLVFFDRM------------RNQGIVPDKVALVTVVYACAKLGAMNKAKAIHA 276
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++ G+ +V +G +ID YA+ G V+ +R +FD M ++ +TW+++IA Y +G +
Sbjct: 277 YINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEK 336
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESVIVGTSI 331
AL++F M++S + N +T ++L A +H G++ G+ + + + V T +
Sbjct: 337 ALELFPMMLRS-GILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCM 395
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
+D+ + G++D A + M EK+ W A++ CR LDL
Sbjct: 396 VDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGA----CRIHRHLDL 439
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/610 (39%), Positives = 355/610 (58%), Gaps = 43/610 (7%)
Query: 53 DSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS 112
DSV+A R+L+ TP + I +C+ L + H F VF+ +
Sbjct: 53 DSVDA-------RELAATP--RLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDN 103
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
+LI +Y KCG ++DAR++FD +P R ++ SWTS++ GY QND EAL L L
Sbjct: 104 SLIHLYCKCGAVADARRVFDGMPAR--DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRF 161
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
+ G AS+L A +G+ E H +K + +V VG+ L+D
Sbjct: 162 KPNG------------FTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDM 209
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
YAR G +D++ VFD + K+ V+WN++IA +A+ G L +F +M ++ + T
Sbjct: 210 YARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRN-GFEATHFT 268
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
S+V AIA +G L GK +H +IK S VG +I+DMY K G + ARK F+++
Sbjct: 269 YSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVD 328
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
+K+V +W +M+ + + REA+ F +M K GV N ITF+S+L+ACSH GLV+EG
Sbjct: 329 KKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQ 388
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ + M E+N+EP ++HY +VDLLGRAG L +A I M +K VWG+LLG+CR+H
Sbjct: 389 YFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMH 447
Query: 473 KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSL 532
KN +G+ AA +FEL+P++ G VLL NIYA+ G+W+ R R +MK + K P S
Sbjct: 448 KNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSW 507
Query: 533 VELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLR 592
VE+ VH F+ D HP+ E+IY+ EE+++++++ GYV + V+ VD++E++ L+
Sbjct: 508 VEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQ 567
Query: 593 IHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFK 634
HSEK+A N+R+CGDCH+ R ISKV REIVVRD+ RFH+F
Sbjct: 568 YHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFS 627
Query: 635 DGLCSCGDYW 644
G CSCGDYW
Sbjct: 628 SGSCSCGDYW 637
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 167/335 (49%), Gaps = 16/335 (4%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SW S+IA A+ EAL M + P TF +K+ A G+Q H
Sbjct: 132 SWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALT 191
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
+ +H DV+V SAL+DMY++CG + A +FD++ +N VSW +++ G+ + +
Sbjct: 192 VKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLES--KNGVSWNALIAGFARKGDGET 249
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
LL+F E E +SV SA + + + H +IK G
Sbjct: 250 TLLMFAEMQRNGFE------------ATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGE 297
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
VGNT++D YA+ G + +RKVFD + +KD VTWNS++ +AQ GL EA+ F++
Sbjct: 298 RLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEE 357
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M K V N +T ++L A +H G+++ GK D + + +LE + +++D+ + G
Sbjct: 358 MRK-CGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAG 416
Query: 340 QVDLARKAFNQMKEKNVRS-WTAMIAGYGMHCRAR 373
++ A +M K + W A++ MH A+
Sbjct: 417 LLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK 451
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 168/386 (43%), Gaps = 79/386 (20%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+F++ KN V SWN++IA AR GD L F+ M++ T T+ + + +
Sbjct: 221 AVFDQLESKNGV-SWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGI 279
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L GK H G FV + ++DMY+K G + DARK+FD + + +++V+W S
Sbjct: 280 GALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDK--KDVVTWNS 337
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
MLT + Q REA+ F+E +CG V ++ + S+L+ACS
Sbjct: 338 MLTAFAQYGLGREAVTHFEEM----RKCG--------VHLNQITFLSILTACS------- 378
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM----IEKDAVTWNSIIA 262
HG ++K G ++ FD M +E + + +++
Sbjct: 379 ----HGGLVKEG------------------------KQYFDMMKEYNLEPEIDHYVTVVD 410
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
+ + GL +AL +M +K A A+L + ++G+ D V ++D +
Sbjct: 411 LLGRAGLLNDALVFIFKM----PMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPD 466
Query: 323 ESVIVGTSII--DMYCKCGQVDLARKAFNQMKEKNVR-----SWTAM-------IAGYGM 368
++ G ++ ++Y GQ D A + MK V+ SW + +A
Sbjct: 467 DT---GPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDT 523
Query: 369 HCRAREAL----DLFYKMIKAGVRPN 390
H R+ E ++ ++ KAG PN
Sbjct: 524 HPRSEEIYKKWEEISIQIRKAGYVPN 549
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/686 (36%), Positives = 380/686 (55%), Gaps = 63/686 (9%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S ++++S K + + LF+ ++ V SWNS+I+ A G ++++A++ M K
Sbjct: 77 SWNTILSAYSKLGRVSEMEYLFDAMPRRDGV-SWNSLISGYAGCGLIYQSVKAYNLMLKN 135
Query: 68 --SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
S R TF + S + G+Q H FGF VFV S L+DMYSK G +S
Sbjct: 136 DGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMIS 195
Query: 126 DARKLFDEIPQ-----------------------------RIRNIVSWTSMLTGYVQNDN 156
ARK+FDE+P+ R R+ +SWTSM+TG+ QN
Sbjct: 196 CARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGL 255
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
R+A+ +F+E LE N+ +D SVL+AC V + H ++I+
Sbjct: 256 DRDAIDIFREMKLE------------NLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIR 303
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
+ + V + L+D Y + ++ + VF M K+ V+W +++ Y QNG + EA+
Sbjct: 304 TDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKT 363
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F M K ++ + TL +V+ + A+L L G H + + L + V +++ +Y
Sbjct: 364 FSDMQK-YGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYG 422
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG ++ + + FN++ K+ +WTA+++GY +A E + LF M+ G++P+ +TF+
Sbjct: 423 KCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIG 482
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VLSACS AGLV++G +M +E I P +HY CM+DL RAG+++EA + I M
Sbjct: 483 VLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFS 542
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
D + W +LL +CR + N+D+G+ AA+ L EL+P+N +VLLS++YA G+WE+V R R
Sbjct: 543 PDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLR 602
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
M+++ L K PG S ++ + +VH F DK +P ++IY LE+LN K+ + GYV DM
Sbjct: 603 KDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMN 662
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
SV+HDV EK L HSEKLA NLRVC DCH + ISK+
Sbjct: 663 SVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKIT 722
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
+REI+VRD+ RFH FKDG CSCGD+W
Sbjct: 723 NREILVRDTARFHLFKDGTCSCGDFW 748
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 213/446 (47%), Gaps = 66/446 (14%)
Query: 78 CAI-KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
CA+ K C H+ K H + + F+ + LI Y+K G + A K+FD++P
Sbjct: 13 CALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPH 72
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE-----------SECGGASE------ 179
N+ SW ++L+ Y + E LF + + CG +
Sbjct: 73 --PNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYN 130
Query: 180 ----NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
N + ++ + +++L S+ + HG V+K GF S V VG+ L+D Y++
Sbjct: 131 LMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSK 190
Query: 236 GGHVDVSRKVFDGMIEK-------------------------------DAVTWNSIIAIY 264
G + +RKVFD + EK D+++W S+I +
Sbjct: 191 MGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGF 250
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
QNGL +A+D+F +M K +++ + T +VL A + L+ GK +H +I+ D +++
Sbjct: 251 TQNGLDRDAIDIFREM-KLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDN 309
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+ V ++++DMYCKC + A F +M KNV SWTAM+ GYG + + EA+ F M K
Sbjct: 310 IFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQK 369
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRA 440
G+ P+ T SV+S+C++ ++EG + H + G+ + +V L G+
Sbjct: 370 YGIEPDDFTLGSVISSCANLASLEEGAQF-----HARALTSGLISFITVSNALVTLYGKC 424
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLL 466
G +++++ L + K D V W +L+
Sbjct: 425 GSIEDSHRLFNEISFK-DEVTWTALV 449
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/656 (37%), Positives = 375/656 (57%), Gaps = 30/656 (4%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
VS + N+ L ++ + +V WN ++ + G EA + FS +
Sbjct: 220 VSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSG 279
Query: 69 LTPTRSTFPCAIKSC--SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
L P + + C + DL GKQ H A G DV V+++L++MYSK G
Sbjct: 280 LRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYF 339
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
AR++F+++ +++SW SM++ Q+ E++ LF + L E D+ +
Sbjct: 340 AREVFNDMKHL--DLISWNSMISSCAQSSLEEESVNLFIDLLHE-------GLKPDHFTL 390
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
S+ +A+ AC + + + H IK GFDS++ V + ++D Y + G + + VF
Sbjct: 391 ASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVF 450
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ + D V W S+I+ NG +AL ++ +M + + V + T + ++ A + + L
Sbjct: 451 NYISAPDDVAWTSMISGCVDNGNEDQALRIYHRM-RQSRVMPDEYTFATLIKASSCVTAL 509
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
G+ +H VIK+D VGTS++DMY KCG ++ A + F +M +N+ W AM+ G
Sbjct: 510 EQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGL 569
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
H A EA++LF M G+ P+ ++F+ +LSACSHAGL E + +L++M +++ IEP
Sbjct: 570 AQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPE 629
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
+EHY C+VD LGRAG ++EA +IE M KA + +LLGACRI +V+ G+ A +LF
Sbjct: 630 IEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLF 689
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
LEP + +VLLSNIYA A RW+DV R +MK + + K PGFS ++++ +H F+V D
Sbjct: 690 ALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDD 749
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
+ HPQ + IY+ +EE+ ++E GYV D V+ DV+ EEKE +L HSEKLA
Sbjct: 750 RSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLIS 809
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH I+ ISKV +REIV+RD+ RFH+F+DG+CSCGDYW
Sbjct: 810 TPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 151/526 (28%), Positives = 261/526 (49%), Gaps = 46/526 (8%)
Query: 3 LSKSSSVSSVVS-NVDKHSTNTNLTTLFNK------------YVDKNNVFSWNSVIADLA 49
L K + VVS + H + NL T+++K + ++ +WN+++ A
Sbjct: 95 LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 154
Query: 50 RG-----GDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF 104
G++ E L F +R + TR T +K C L + + H A G
Sbjct: 155 ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGL 214
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
DVFVS AL+++YSKCG + DAR LFD + R R++V W ML GYVQ +EA LF
Sbjct: 215 EWDVFVSGALVNIYSKCGRMRDARLLFDWM--RERDVVLWNMMLKGYVQLGLEKEAFQLF 272
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSE 222
EF + + D ++ +L+ C + + G HG +K G DS+
Sbjct: 273 SEF------------HRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSD 320
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
V V N+L++ Y++ G +R+VF+ M D ++WNS+I+ AQ+ L E++++F ++
Sbjct: 321 VSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLH 380
Query: 283 STDVKCNAVTLSAVLLAIAH-----LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
+K + TL+++ LA A L +L GK IH IK + + V + I+DMY K
Sbjct: 381 E-GLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIK 439
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
CG + A FN + + +WT+MI+G + +AL ++++M ++ V P+ TF ++
Sbjct: 440 CGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATL 499
Query: 398 LSACSHAGLVQEGWHW-LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+ A S +++G N + + +P V +VD+ + G +++AY L + M V+
Sbjct: 500 IKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR 557
Query: 457 ADFVVWGSLLGACRIHKNVD--LGEIAAKKLFELEPNNCGYHVLLS 500
+ +W ++L H N + + + K +EP+ + +LS
Sbjct: 558 -NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 602
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 203/413 (49%), Gaps = 37/413 (8%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+++ + H+L GK H + + G D F+S+ L+ MYSKCG LS AR++FD P+R
Sbjct: 84 LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPER-- 141
Query: 140 NIVSWTSMLTGYV----QND-NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
++V+W ++L Y ND NA+E L LF+ L + G + + +A V
Sbjct: 142 DLVTWNAILGAYAASVDSNDGNAQEGLHLFR---LLRASLGSTTR---------MTLAPV 189
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
L C EG HG+ IK G + +V V L++ Y++ G + +R +FD M E+D
Sbjct: 190 LKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDV 249
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV--LRLGKCI 312
V WN ++ Y Q GL EA +F + +S ++ + ++ +L G L LGK +
Sbjct: 250 VLWNMMLKGYVQLGLEKEAFQLFSEFHRS-GLRPDEFSVQLILNGCLWAGTDDLELGKQV 308
Query: 313 HDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
H +K L+ V V S+++MY K G AR+ FN MK ++ SW +MI+
Sbjct: 309 HGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLE 368
Query: 373 REALDLFYKMIKAGVRPNYITFVSVL-----SACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
E+++LF ++ G++P++ T S+ AC L+ +G H I+ G
Sbjct: 369 EESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQG-----KQIHAHAIKAGF 423
Query: 428 E---HYGC-MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
+ H ++D+ + G + A + + D V W S++ C + N D
Sbjct: 424 DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDD-VAWTSMISGCVDNGNED 475
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/633 (39%), Positives = 367/633 (57%), Gaps = 35/633 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ +D+ + SWNS+++ + G EA+ S M + P + + L L
Sbjct: 324 REIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLL 383
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+GK+ H A D V + L+DMY KC + + +FD + RI++ +SWT+++T
Sbjct: 384 NGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRM--RIKDHISWTTIITC 441
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y Q+ EAL +F+E + + VD + I S+L ACS + + +
Sbjct: 442 YAQSSRHIEALEIFRE------------AQKEGIKVDPMMIGSILEACSGLETILLAKQL 489
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H + I+ G V V N +ID Y G V S K+F+ + +KD VTW S+I YA +GL
Sbjct: 490 HCYAIRNGLLDLV-VKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLL 548
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EAL +F +M +STDV+ ++V L ++L AI L L GK +H +I+ + + +S
Sbjct: 549 NEALVLFAEM-QSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSS 607
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++DMY CG + A K FN +K K++ WTAMI GMH ++A+DLF +M++ GV P+
Sbjct: 608 LVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPD 667
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+++F+++L ACSH+ LV EG +L+ M + +EP EHY C+VDLLGR+G+ +EAY+ I
Sbjct: 668 HVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFI 727
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
+ M +K VVW SLLGACR+HKN +L +AA +L ELEP+N G +VL+SN++A G+W
Sbjct: 728 KSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWN 787
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL-QEV 569
+ + R+ + R L K P S +E+ VH F D H E+I L E+ +L +E
Sbjct: 788 NAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEG 847
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GY D SV+HDV +EEK L HSE+LA NLRVCGDCH
Sbjct: 848 GYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFT 907
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+L+SK+ DR+IVVRD+ RFH+F G CSCGD+W
Sbjct: 908 KLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 221/444 (49%), Gaps = 35/444 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMR---KLSLTPTRSTFPCAIKSCSALHDL 89
+ VFSWN++I G + EAL + +MR + P T +K+ D
Sbjct: 121 MSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDG 180
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
G + H A G R FV++ALI MY+KCG L A ++F E+ R++ SW SM++
Sbjct: 181 RCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVF-ELMHDGRDVASWNSMIS 239
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
G +QN +AL LF+ + ++S VL C+ + +
Sbjct: 240 GCLQNGMFLQALDLFRGM------------QRAVLSMNSYTTVGVLQVCTELAQLNLGRE 287
Query: 210 AHGFVIKRGFDSEVGVG-NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H ++K G SEV + N L+ Y + G VD + +VF + EKD ++WNS+++ Y QNG
Sbjct: 288 LHAALLKSG--SEVNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNG 345
Query: 269 LAAEALDVFDQMVK---STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
L AEA++ +M++ D C V+LS+ A+ HLG L GK +H IK L+
Sbjct: 346 LYAEAIEFISEMLRGGFQPDHAC-IVSLSS---AVGHLGWLLNGKEVHAYAIKQRLDSDT 401
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VG +++DMY KC ++ + F++M+ K+ SWT +I Y R EAL++F + K
Sbjct: 402 QVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKE 461
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY---GCMVDLLGRAGK 442
G++ + + S+L ACS + L H + I G+ ++D+ G G+
Sbjct: 462 GIKVDPMMIGSILEACSGLETI-----LLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGE 516
Query: 443 LKEAYDLIEGMKVKADFVVWGSLL 466
+ + + E ++ K D V W S++
Sbjct: 517 VYHSLKMFETVEQK-DIVTWTSMI 539
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 229/448 (51%), Gaps = 25/448 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F D +V SWNS+I+ + G ++AL F M++ L+ T ++ C+ L
Sbjct: 221 VFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELA 280
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L+ G++ H G ++ +AL+ MY+KCG + A ++F EI + ++ +SW SM
Sbjct: 281 QLNLGRELHAALLKSGSEVNI-QCNALLVMYTKCGRVDSALRVFREIDE--KDYISWNSM 337
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV--TVNG 205
L+ YVQN EA+ E L GG D I S+ SA + +NG
Sbjct: 338 LSCYVQNGLYAEAIEFISEMLR-----GGFQP-------DHACIVSLSSAVGHLGWLLNG 385
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H + IK+ DS+ VGNTL+D Y + +++ S VFD M KD ++W +II YA
Sbjct: 386 --KEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYA 443
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q+ EAL++F + K +K + + + ++L A + L + L K +H I+ L + +
Sbjct: 444 QSSRHIEALEIFREAQKE-GIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLD-L 501
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+V IID+Y +CG+V + K F +++K++ +WT+MI Y EAL LF +M
Sbjct: 502 VVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQST 561
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLN-TMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
V+P+ + VS+L A + +G + F++E + +VD+ G L
Sbjct: 562 DVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAI--VSSLVDMYSGCGSLS 619
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIH 472
A + +K K D V+W +++ A +H
Sbjct: 620 GALKVFNAVKCK-DMVLWTAMINATGMH 646
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 191/370 (51%), Gaps = 19/370 (5%)
Query: 45 IADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF 104
+ L + G+ +ALR +S + +P + + + +A + G Q H A G
Sbjct: 31 LKQLCKEGNLRQALRLLTS-QTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGS 89
Query: 105 HR--DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
D F+++ L+ MY KCG ++DAR LFD + R + SW +++ Y+ + +A EAL
Sbjct: 90 LEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSR--TVFSWNALIGAYLSSGSACEALG 147
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE-GAHGFVIKRGFDS 221
+++ L + V D +ASVL A S V +G HG +K G D
Sbjct: 148 VYRAMRLSAA---------SGVAPDGCTLASVLKA-SGVEGDGRCGCEVHGLAVKHGLDR 197
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
V N LI YA+ G +D + +VF+ M + +D +WNS+I+ QNG+ +ALD+F M
Sbjct: 198 STFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGM 257
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
++ + N+ T VL L L LG+ +H ++K E + I +++ MY KCG+
Sbjct: 258 QRAV-LSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVN-IQCNALLVMYTKCGR 315
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
VD A + F ++ EK+ SW +M++ Y + EA++ +M++ G +P++ VS+ SA
Sbjct: 316 VDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSA 375
Query: 401 CSHAGLVQEG 410
H G + G
Sbjct: 376 VGHLGWLLNG 385
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/649 (37%), Positives = 360/649 (55%), Gaps = 53/649 (8%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
V +WN++++ L + G EA+ M + P TF A+ +CS L L G++
Sbjct: 234 GGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREM 293
Query: 96 HQQAFIF---GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H A++ + FV+SAL+DMY+ + AR++FD +P R + W +M+ GY
Sbjct: 294 H--AYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYA 351
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q EAL LF E+E G V IA VL AC+R E HG
Sbjct: 352 QAGMDEEALELFARM---EAEAG--------VVPSETTIAGVLPACARSETFAGKEAVHG 400
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+V+KRG V N L+D YAR G ++ +R +F + +D V+WN++I G +
Sbjct: 401 YVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHD 460
Query: 273 ALDVFDQM--------------VKSTD---VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
A + +M + TD V N VTL +L A L GK IH
Sbjct: 461 AFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGY 520
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
++ L+ + VG++++DMY KCG + L+R F+++ ++NV +W +I YGMH EA
Sbjct: 521 AMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEA 580
Query: 376 LDLFYKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
+ LF +M+ + +PN +TF++ L+ACSH+G+V G ++M ++P + + C V
Sbjct: 581 IALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAV 640
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFV-VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
D+LGRAG+L EAY +I M+ V W S LGACR+H+NV LGEIAA++LF+LEP+
Sbjct: 641 DILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEA 700
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
++VLL NIY+ AG WE R+ M+ R ++K PG S +EL G +H F+ G+ HP+
Sbjct: 701 SHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPEST 760
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------- 599
++ +++ L +++ GY D +SV+HD+++ EK LR HSEKLA
Sbjct: 761 LVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATI 820
Query: 600 ----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + IS++V REIV+RD +RFH+F DG CSCGDYW
Sbjct: 821 RVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 210/420 (50%), Gaps = 41/420 (9%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAF----IFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P A KS +AL L + + H A + GF V++AL+ Y++CG+L+ A L
Sbjct: 61 ALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGF--TPAVANALLTAYARCGDLTAALAL 118
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F+ +P R+ V++ S++ AL ++ LLE + S
Sbjct: 119 FNAMPS--RDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHP------------LSSFT 164
Query: 191 IASVLSACSRVTVN-GVTEGAHGFVIKRGF--DSEVGVGNTLIDAYARGGHVDVSRKVFD 247
+ SVL ACS + + + AH F +K GF E N L+ YAR G VD ++ +F
Sbjct: 165 LVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFG 224
Query: 248 GMIEKDA-----VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
+ D+ VTWN+++++ Q+G EA++V MV + V+ + +T ++ L A +
Sbjct: 225 SVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMV-ARGVRPDGITFASALPACSQ 283
Query: 303 LGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK--EKNVRSW 359
L +L LG+ +H V+K DL + V ++++DMY +V +AR+ F+ + + + W
Sbjct: 284 LEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLW 343
Query: 360 TAMIAGYGMHCRAREALDLFYKM-IKAGVRPNYITFVSVLSACSHAGLV--QEGWH-WLN 415
AM+ GY EAL+LF +M +AGV P+ T VL AC+ + +E H ++
Sbjct: 344 NAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVL 403
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
G N P V++ ++DL R G ++ A + ++ + D V W +L+ C + ++
Sbjct: 404 KRGMADN--PFVQN--ALMDLYARLGDMEAARWIFAAIEPR-DVVSWNTLITGCVVQGHI 458
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 84/212 (39%), Gaps = 43/212 (20%)
Query: 310 KCIHDQVIKMDLEE--SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
+ IH ++ DL + V +++ Y +CG + A FN M ++ ++ ++IA
Sbjct: 79 RSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALC 138
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH------------------------ 403
+ R ALD M+ G + T VSVL ACSH
Sbjct: 139 LFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGD 198
Query: 404 --------------AGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
GLV + ++ + GV + MV LL ++G+ EA ++
Sbjct: 199 ERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEV 258
Query: 450 IEGM---KVKADFVVWGSLLGACRIHKNVDLG 478
I M V+ D + + S L AC + + LG
Sbjct: 259 IYDMVARGVRPDGITFASALPACSQLEMLSLG 290
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/636 (37%), Positives = 362/636 (56%), Gaps = 56/636 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K D++ V SWNS+I+ G + L + M L + +T + C+
Sbjct: 207 LFDKLCDRD-VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSG 265
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H A F R + S+ L+DMYSKCG+L A ++F+++ + RN+VSWTSM
Sbjct: 266 TLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE--RNVVSWTSM 323
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY ++ + A+ L ++ + V +D VAI S+L AC+R
Sbjct: 324 IAGYTRDGRSDGAIKLLQQM------------EKEGVKLDVVAITSILHACARSGSLDNG 371
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H ++ +S + V N L+D YA+ G ++ + VF M+ KD ++WN++I
Sbjct: 372 KDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG----- 426
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
++K ++ T++ VL A A L L GK IH +++ V
Sbjct: 427 -----------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHV 469
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+++D+Y KCG + LAR F+ + K++ SWT MIAGYGMH EA+ F +M AG+
Sbjct: 470 ANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGI 529
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ ++F+S+L ACSH+GL+++GW + M ++FNIEP +EHY CMVDLL R G L +AY
Sbjct: 530 EPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAY 589
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ +E + + D +WG+LL CR + +++L E A+++FELEP N GY+VLL+NIYA A
Sbjct: 590 EFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAE 649
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK-EHPQHEKIYEYLEELNVKL 566
+WE+V+R R + + L K PG S +E++GKV+ F+ G+ HP + I L+++ K+
Sbjct: 650 KWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKM 709
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+E G+ + + D+ +KEM L HSEKLA NLRVCGDCH
Sbjct: 710 KEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCH 769
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ + +SK REIV+RDS RFH+FKDG CSC +W
Sbjct: 770 EMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 133/567 (23%), Positives = 241/567 (42%), Gaps = 85/567 (14%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
+ K S + + S + ++ + +D + V +N+ I + GD A+
Sbjct: 32 IHKPSLKTKIFSPIFSSCIPIRISATPTRTID-HQVTDYNAKILHFCQLGDLENAMELIC 90
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
+K L T+ ++ C+ L GK+ H D + L+ Y+ CG
Sbjct: 91 MCQKSELET--KTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCG 148
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+L + R++FD + ++ N+ W M++ Y + + +E++ LFK ++E+ G E++
Sbjct: 149 DLKEGRRVFDTMEKK--NVYLWNFMVSEYAKIGDFKESICLFK-IMVEKGIEGKRPESAF 205
Query: 183 NVF----------------------------------------VDSVAIASVLSACSRVT 202
+F VD I SVL C+
Sbjct: 206 ELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSG 265
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ + H IK F+ + NTL+D Y++ G +D + +VF+ M E++ V+W S+IA
Sbjct: 266 TLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA 325
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
Y ++G + A+ + QM K VK + V ++++L A A G L GK +HD + ++E
Sbjct: 326 GYTRDGRSDGAIKLLQQMEKE-GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNME 384
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
++ V +++DMY KCG ++ A F+ M K++ SW MI
Sbjct: 385 SNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI------------------- 425
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLG 438
++P+ T VL AC+ ++ G H + + G +VDL
Sbjct: 426 --GELKPDSRTMACVLPACASLSALERGKEI-----HGYILRNGYSSDRHVANALVDLYV 478
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH--KNVDLGEIAAKKLFELEPNNCGYH 496
+ G L A L + + K D V W ++ +H N + + +EP+ +
Sbjct: 479 KCGVLGLARLLFDMIPSK-DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF- 536
Query: 497 VLLSNIYA--NAGRWEDVERTRSLMKN 521
+S +YA ++G E R +MKN
Sbjct: 537 --ISILYACSHSGLLEQGWRFFYIMKN 561
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 12/132 (9%)
Query: 25 LTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCS 84
L L + ++ SW +IA G EA+ F+ MR + P +F + +CS
Sbjct: 485 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544
Query: 85 ALHDLHSGKQAHQQAFIFGFHRDVFVSSAL------IDMYSKCGELSDARKLFDEIPQRI 138
HSG F + D + L +D+ S+ G LS A + + +P
Sbjct: 545 -----HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAP 599
Query: 139 RNIVSWTSMLTG 150
+ W ++L G
Sbjct: 600 DATI-WGALLCG 610
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 251/659 (38%), Positives = 376/659 (57%), Gaps = 59/659 (8%)
Query: 11 SVVSNVDKHS-TNTNLTTLFNKYVD---KNNVFSWNSVIADLARGGDSVEALRAFSSMRK 66
SV NV S N L +L Y D + + SWN ++A R G EA F+S +
Sbjct: 131 SVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTE 190
Query: 67 LSLTPTRSTFPCAIKSCSALHD--LHSGKQAH-QQAFIFGFHRDVFVSSALIDMYSKCGE 123
+ S +AL + GK + ++ F RDV + ++ Y++ G+
Sbjct: 191 WDVI-----------SWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGD 239
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ +AR+LFD P +R++ +WT++++GY QN EA +F E S N
Sbjct: 240 MVEARRLFDAAP--VRDVFTWTAVVSGYAQNGMLEEARRVFDAM----PERNAVSWN--- 290
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
A V + R ++ E + + V NT++ YA+ G ++ ++
Sbjct: 291 --------AMVAAYIQRRMMDEAKELFNMMPCR-----NVASWNTMLTGYAQAGMLEEAK 337
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VFD M +KDAV+W +++A Y+Q G + E L +F +M + + N + VL A +
Sbjct: 338 AVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW-VNRSAFACVLSTCADI 396
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L G +H ++I+ VG +++ MY KCG ++ AR AF +M+E++V SW MI
Sbjct: 397 AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMI 456
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
AGY H +EAL++F M +P+ IT V VL+ACSH+GLV++G + +M H+F +
Sbjct: 457 AGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGV 516
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
EHY CM+DLLGRAG+L EA+DL++ M + D +WG+LLGA RIH+N +LG AA+
Sbjct: 517 TAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAE 576
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
K+FELEP N G +VLLSNIYA++G+W D + R +M+ R + K PGFS +E++ KVH F
Sbjct: 577 KIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFS 636
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
GD HP+ EKIY +LE+L++++++ GYV+ V+HDV++EEKE L+ HSEKLA
Sbjct: 637 AGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYG 696
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH + IS + R I++RDS RFH+F+ G CSCGDYW
Sbjct: 697 ILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 170/369 (46%), Gaps = 55/369 (14%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
+V S+ I + + G ++DA +LF +P+R + ++ +ML GY N A LF+
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRR--STSTYNAMLAGYSANGRLPLAASLFRA 94
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVG 226
++ S N + ++A++S L+ RG E+ V
Sbjct: 95 IPRPDN-------YSYNTLLHALAVSSSLADA------------------RGLFDEMPVR 129
Query: 227 -----NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
N +I ++A G V ++R FD EKDAV+WN ++A Y +NG EA +F+
Sbjct: 130 DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN--- 186
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ + + ++ +A++ G + + + D++ D V+ ++ Y + G +
Sbjct: 187 --SRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRD----VVSWNIMVSGYARRGDM 240
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
AR+ F+ ++V +WTA+++GY + EA +F M + N +++ ++++A
Sbjct: 241 VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAY 296
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEP--GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
++ E FN+ P V + M+ +AG L+EA + + M K D
Sbjct: 297 IQRRMMDEA-------KELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK-DA 348
Query: 460 VVWGSLLGA 468
V W ++L A
Sbjct: 349 VSWAAMLAA 357
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 122/274 (44%), Gaps = 27/274 (9%)
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
+ EV N I A+ R G V + ++F M + T+N+++A Y+ NG A +F
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
+ + + N +L A+A L + + D+ M + +SV +I +
Sbjct: 94 AIPRPDNYSYN-----TLLHALAVSSSLADARGLFDE---MPVRDSVTYNV-MISSHANH 144
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G V LAR F+ EK+ SW M+A Y + R EA LF + V I++ +++
Sbjct: 145 GLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDV----ISWNALM 200
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPG--VEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
S G VQ W ++ F+ PG V + MV R G + EA L + V+
Sbjct: 201 S-----GYVQ--WGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR 253
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
D W +++ +N L E A+++F+ P
Sbjct: 254 -DVFTWTAVVSG--YAQNGMLEE--ARRVFDAMP 282
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/555 (41%), Positives = 337/555 (60%), Gaps = 37/555 (6%)
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
+FVS++L MY+K G L DA ++FD +P +RN+V+WT+++ D ++ L F
Sbjct: 104 LFVSNSLASMYAKFGLLDDALRMFDGMP--VRNVVTWTTVVAALASADGRKQEALRFL-- 159
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN 227
+ D V ++ +SVL AC T G+ H +K G DS+V V +
Sbjct: 160 ---------VAMRRDGVAPNAYTFSSVLGAC---TTPGMLTAVHASTVKAGLDSDVFVRS 207
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
+LIDAY + G +D R+VFD M+ +D V WNSIIA +AQ+G A+++F +M K
Sbjct: 208 SLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRM-KDAGFS 266
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
N TL++VL A + +L G+ +H V+K D +I+ +++DMYCKCG ++ A
Sbjct: 267 SNQGTLTSVLRACTGMVMLEAGRQVHAHVLKYD--RDLILHNALLDMYCKCGSLEDADAL 324
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F++M +++V SW+ M++G + ++ EAL +F M GV PN++T V VL ACSHAGLV
Sbjct: 325 FHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLV 384
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
++GWH+ +M F I+P EH+ CMVDLLGRAGKL EA + I GM ++ D V+W +LLG
Sbjct: 385 EDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLG 444
Query: 468 ACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKT 527
ACR+HKN L AA+++ +LEP++ G VLLSN YA+ +W D E+ M++R + K
Sbjct: 445 ACRMHKNASLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKE 504
Query: 528 PGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEK 587
PG S +EL +VH F+ GD HP + I + L L +++ +GYV V+ D+ E+K
Sbjct: 505 PGRSWIELEKRVHVFIAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQK 564
Query: 588 EMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
E L+ HSEK+A NLR+CGDCH +L+SK R IV+RD R
Sbjct: 565 EDLLKYHSEKMAIVFGTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVR 624
Query: 630 FHYFKDGLCSCGDYW 644
FH+F+DG CSCGDYW
Sbjct: 625 FHHFQDGACSCGDYW 639
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 168/337 (49%), Gaps = 23/337 (6%)
Query: 36 NNVFSWNSVIADLARG-GDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
NV +W +V+A LA G EALR +MR+ + P TF + +C+ L +
Sbjct: 133 RNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGMLTA--- 189
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H G DVFV S+LID Y K G+L R++FDE+ R++V W S++ G+ Q+
Sbjct: 190 VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMV--TRDLVVWNSIIAGFAQS 247
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+ A+ LF + G S N + SVL AC+ + + H V
Sbjct: 248 GDGVGAIELFMRM-----KDAGFSSNQGT-------LTSVLRACTGMVMLEAGRQVHAHV 295
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+K +D ++ + N L+D Y + G ++ + +F M ++D ++W+++++ AQNG + EAL
Sbjct: 296 LK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEAL 353
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSIID 333
VFD M KS V N VT+ VL A +H G++ G + ++ ++ ++D
Sbjct: 354 RVFDLM-KSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVD 412
Query: 334 MYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+ + G++D A + + M E + W ++ MH
Sbjct: 413 LLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMH 449
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 132/253 (52%), Gaps = 26/253 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ V ++ V WNS+IA A+ GD V A+ F M+ + + T +++C+ +
Sbjct: 225 VFDEMVTRDLVV-WNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMV 283
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L +G+Q H A + + RD+ + +AL+DMY KCG L DA LF +PQ R+++SW++M
Sbjct: 284 MLEAGRQVH--AHVLKYDRDLILHNALLDMYCKCGSLEDADALFHRMPQ--RDVISWSTM 339
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G QN + EAL +F S V + V + VL ACS + V
Sbjct: 340 VSGLAQNGKSVEALRVFDLM------------KSQGVAPNHVTMVGVLFACSHAGL--VE 385
Query: 208 EGAHGF-VIKR--GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA- 262
+G H F +KR G E N ++D R G +D + + GM +E D+V W +++
Sbjct: 386 DGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGA 445
Query: 263 --IYAQNGLAAEA 273
++ LAA A
Sbjct: 446 CRMHKNASLAAYA 458
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/631 (36%), Positives = 373/631 (59%), Gaps = 37/631 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++ ++ SWN+++A L G +EAL+ F R T+ST+ IK C+ + L
Sbjct: 266 METRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLA 325
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H GFH V +AL+D YSK G+L +A +F + +N+VSWT+M+ G +
Sbjct: 326 RQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIF-LLMSGSQNVVSWTAMINGCI 384
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN + A LF D V + +++L+A +V + H
Sbjct: 385 QNGDVPLAAALFSRM------------REDGVAPNDFTYSTILTA----SVASLPPQIHA 428
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
VIK ++ VG L+ +Y++ + + + +F + +KD V+W++++ YAQ G +
Sbjct: 429 QVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDG 488
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV-LRLGKCIHDQVIKMDLEESVIVGTSI 331
A ++F +M +K N T+S+V+ A A + LG+ H IK +++ V +++
Sbjct: 489 ATNIFIKMTMH-GLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSAL 547
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ MY + G ++ A+ F + ++++ SW +M++GY H +++ALD+F +M G+ +
Sbjct: 548 VSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDG 607
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+TF+SV+ C+HAGLV+EG + ++M ++ I P +EHY CMVDL RAGKL EA LIE
Sbjct: 608 VTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIE 667
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
GM A +VW +LLGAC++HKNV+LG++AA+KL LEP + +VLLSNIY+ AG+W++
Sbjct: 668 GMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKE 727
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
+ R LM +++ K G S ++++ KVH+F+ DK HP E+IY L + KL++ GY
Sbjct: 728 KDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGY 787
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
D + +H+V +E+KE L +HSE+LA NLRVCGDCHTVI++
Sbjct: 788 CPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKM 847
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+SK+ DREIV+RD RFH+F G+CSCGD+W
Sbjct: 848 VSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 209/439 (47%), Gaps = 29/439 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K NV +W S++ + G + + F MR + P TF + ++ + G
Sbjct: 165 MPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLG 224
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ H Q+ FG VFV ++L++MY+KCG + +AR +F R++VSW +++ G V
Sbjct: 225 RRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVF--CGMETRDMVSWNTLMAGLV 282
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N + EAL LF + S +S + S A+V+ C+ + G+ H
Sbjct: 283 LNGHDLEALQLFHD-----------SRSSITMLTQST-YATVIKLCANIKQLGLARQLHS 330
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQNGLAA 271
V+KRGF S V L+DAY++ G + + +F M ++ V+W ++I QNG
Sbjct: 331 SVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVP 390
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
A +F +M + V N T S +L A V L IH QVIK + E + IVGT++
Sbjct: 391 LAAALFSRM-REDGVAPNDFTYSTILTA----SVASLPPQIHAQVIKTNYECTSIVGTAL 445
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ Y K + A F + +K+V SW+AM+ Y + A ++F KM G++PN
Sbjct: 446 LASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNE 505
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC----MVDLLGRAGKLKEAY 447
T SV+ AC+ + L H +I+ C +V + R G ++ A
Sbjct: 506 FTISSVIDACASPTAGVD----LGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQ 561
Query: 448 DLIEGMKVKADFVVWGSLL 466
+ E + D V W S+L
Sbjct: 562 CIFE-RQTDRDLVSWNSML 579
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 169/323 (52%), Gaps = 17/323 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHR-DVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
+K C ++ D GKQ H G R DV V ++L+DMY K + D RK+F+ +P+
Sbjct: 110 LKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPK-- 167
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
RN+V+WTS+LTGY+Q+ + + LF ++ V+ +SV ASVLS
Sbjct: 168 RNVVTWTSLLTGYIQDGALSDVMELFFRM------------RAEGVWPNSVTFASVLSVV 215
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ + + H +K G S V V N+L++ YA+ G V+ +R VF GM +D V+WN
Sbjct: 216 ASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWN 275
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
+++A NG EAL +F +S+ T + V+ A++ L L + +H V+K
Sbjct: 276 TLMAGLVLNGHDLEALQLFHD-SRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLK 334
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALD 377
V T+++D Y K GQ+ A F M +NV SWTAMI G + A
Sbjct: 335 RGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAA 394
Query: 378 LFYKMIKAGVRPNYITFVSVLSA 400
LF +M + GV PN T+ ++L+A
Sbjct: 395 LFSRMREDGVAPNDFTYSTILTA 417
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 195/402 (48%), Gaps = 28/402 (6%)
Query: 106 RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
+ S ++ + + + AR+ FDEIP R + L + + + +AL
Sbjct: 36 QSTLACSVPLENQTNLNDATGARQAFDEIPHR----NTLDHALFDHARRGSVHQAL---- 87
Query: 166 EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD-SEVG 224
+ L+ C G V A+ VL C V + + HG I+ G D +VG
Sbjct: 88 DHFLDVHRCHGGR-------VGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVG 140
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
VG +L+D Y + V RKVF+ M +++ VTW S++ Y Q+G ++ +++F +M ++
Sbjct: 141 VGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRM-RAE 199
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
V N+VT ++VL +A G++ LG+ +H Q +K +V V S+++MY KCG V+ A
Sbjct: 200 GVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEA 259
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R F M+ +++ SW ++AG ++ EAL LF+ + T+ +V+ C A
Sbjct: 260 RVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLC--A 317
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYG----CMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
+ Q G L H ++ G YG ++D +AG+L A D+ M + V
Sbjct: 318 NIKQLG---LARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVV 374
Query: 461 VWGSLLGACRIHKNVDLGEIAAKKLFE--LEPNNCGYHVLLS 500
W +++ C + +V L ++ E + PN+ Y +L+
Sbjct: 375 SWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILT 416
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 163/350 (46%), Gaps = 24/350 (6%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N +F NV SW ++I + GD A FS MR+ + P T+ + +
Sbjct: 359 NALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTAS 418
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
A Q H Q + V +AL+ YSK +A +F I Q +++VS
Sbjct: 419 VA----SLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQ--KDVVS 472
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W++MLT Y Q ++ A +F + + G N I+SV+ AC+ T
Sbjct: 473 WSAMLTCYAQAGDSDGATNIFIKMTMH-----GLKPN-------EFTISSVIDACASPTA 520
Query: 204 NGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSII 261
GV G H IK + V + L+ YAR G ++ ++ +F+ ++D V+WNS++
Sbjct: 521 -GVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSML 579
Query: 262 AIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MD 320
+ YAQ+G + +ALDVF QM ++ ++ + VT +V++ AH G++ G+ D + +
Sbjct: 580 SGYAQHGYSQKALDVFRQM-EAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYG 638
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+ ++ ++D+Y + G++D A M W ++ +H
Sbjct: 639 ITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVH 688
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 33/252 (13%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
NT K +D+ +V SW++++ A+ GDS A F M L P T I
Sbjct: 454 NTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVID 513
Query: 82 SC-SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
+C S + G+Q H + H + VSSAL+ MY++ G + A+ +F+ Q R+
Sbjct: 514 ACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFER--QTDRD 571
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
+VSW SML+GY Q+ +++AL +F++ ++ + +D V SV+ C+
Sbjct: 572 LVSWNSMLSGYAQHGYSQKALDVFRQM------------EAEGIEMDGVTFLSVIMGCAH 619
Query: 201 VTVNGVTEGAHGFVIKRGFDS---EVGVGNT------LIDAYARGGHVDVSRKVFDGM-I 250
+ V EG +R FDS + G+ T ++D Y+R G +D + + +GM
Sbjct: 620 AGL--VEEG------QRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSF 671
Query: 251 EKDAVTWNSIIA 262
+ W +++
Sbjct: 672 PAGPMVWRTLLG 683
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/636 (37%), Positives = 361/636 (56%), Gaps = 56/636 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K D++ V SWNS+I+ G + L + M L + +T + C+
Sbjct: 207 LFDKLCDRD-VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSG 265
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H A F R + S+ L+DMYSKCG+L A ++F+++ + RN+VSWTSM
Sbjct: 266 TLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE--RNVVSWTSM 323
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY ++ + A+ L ++ + V +D VAI S+L AC+R
Sbjct: 324 IAGYTRDGRSDGAIKLLQQM------------EKEGVKLDVVAITSILHACARSGSLDNG 371
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H ++ +S + V N L+D YA+ G ++ + VF M+ KD ++WN++I
Sbjct: 372 KDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG----- 426
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
++K ++ T++ VL A A L L GK IH +++ V
Sbjct: 427 -----------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHV 469
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+++D+Y KCG + LAR F+ + K++ SWT MIAGYGMH EA+ F +M AG+
Sbjct: 470 ANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGI 529
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ ++F+S+L ACSH+GL+++GW + M ++FNIEP +EHY CMVDLL R G L +AY
Sbjct: 530 EPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAY 589
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ IE + + D +WG+LL CR + +++L E A+++FELEP N GY+VLL+NIYA A
Sbjct: 590 EFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAE 649
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK-EHPQHEKIYEYLEELNVKL 566
+WE+V+R R + + L K PG S +E++GKV+ F+ G+ HP + I L+++ K+
Sbjct: 650 KWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKM 709
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+E G+ + + D+ +KEM L HSEKLA NLRVCGDCH
Sbjct: 710 KEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCH 769
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ + +SK REIV+RD RFH+FKDG CSC +W
Sbjct: 770 EMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 133/567 (23%), Positives = 241/567 (42%), Gaps = 85/567 (14%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
+ K S + + S + ++ + +D + V +N+ I + GD A+
Sbjct: 32 IHKPSLKTKIFSPIFSSCIPIRISATPTRTID-HQVTDYNAKILHFCQLGDLENAMELIC 90
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
+K L T+ ++ C+ L GK+ H D + L+ Y+ CG
Sbjct: 91 MCKKSELET--KTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCG 148
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+L + R++FD + ++ N+ W M++ Y + + +E++ LFK ++E+ G E++
Sbjct: 149 DLKEGRRVFDTMEKK--NVYLWNFMVSEYAKIGDFKESICLFK-IMVEKGIEGKRPESAF 205
Query: 183 NVF----------------------------------------VDSVAIASVLSACSRVT 202
+F VD I SVL C+
Sbjct: 206 ELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSG 265
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ + H IK F+ + NTL+D Y++ G +D + +VF+ M E++ V+W S+IA
Sbjct: 266 TLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA 325
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
Y ++G + A+ + QM K VK + V ++++L A A G L GK +HD + ++E
Sbjct: 326 GYTRDGRSDGAIKLLQQMEKE-GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNME 384
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
++ V +++DMY KCG ++ A F+ M K++ SW MI
Sbjct: 385 SNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI------------------- 425
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLG 438
++P+ T VL AC+ ++ G H + + G +VDL
Sbjct: 426 --GELKPDSRTMACVLPACASLSALERGKEI-----HGYILRNGYSSDRHVANALVDLYV 478
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH--KNVDLGEIAAKKLFELEPNNCGYH 496
+ G L A L + + K D V W ++ +H N + + +EP+ +
Sbjct: 479 KCGVLGLARLLFDMIPSK-DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF- 536
Query: 497 VLLSNIYA--NAGRWEDVERTRSLMKN 521
+S +YA ++G E R +MKN
Sbjct: 537 --ISILYACSHSGLLEQGWRFFYIMKN 561
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 12/132 (9%)
Query: 25 LTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCS 84
L L + ++ SW +IA G EA+ F+ MR + P +F + +CS
Sbjct: 485 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544
Query: 85 ALHDLHSGKQAHQQAFIFGFHRDVFVSSAL------IDMYSKCGELSDARKLFDEIPQRI 138
HSG F + D + L +D+ S+ G LS A + + +P
Sbjct: 545 -----HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAP 599
Query: 139 RNIVSWTSMLTG 150
+ W ++L G
Sbjct: 600 DATI-WGALLCG 610
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/587 (39%), Positives = 352/587 (59%), Gaps = 34/587 (5%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
+ AI +C L G+Q H + + VF+ + L+ MY +CG L DAR + D +P
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+R ++VSWT+M++GY Q + EAL LF + L + C + +A+VL
Sbjct: 73 ER--SVVSWTTMISGYSQTERHVEALDLFIKML--RAGC----------IPNEYTLATVL 118
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
++CS + H ++K F+S + VG++L+D YA+ ++ +R+VFD + E+D V
Sbjct: 119 TSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVV 178
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+ +II+ YAQ GL EALD+F Q+ S ++CN VT + ++ A++ L L GK +H
Sbjct: 179 SCTAIISGYAQKGLDEEALDLFRQLY-SEGMQCNHVTFTTLVTALSGLASLDYGKQVHAL 237
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+++ +L V + S+IDMY KCG++ +R+ F+ M E++V SW AM+ GYG H E
Sbjct: 238 ILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEV 297
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
+ LF + K V+P+ +T ++VLS CSH GLV EG +T+ E + HYGC++D
Sbjct: 298 ISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIID 356
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY 495
LLGR+G+L++A +LIE M ++ +WGSLLGACR+H NV +GE+ A+KL E+EP N G
Sbjct: 357 LLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGN 416
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
+V+LSNIYA AG W+DV + R LM + + K PG S + L +H F ++ HP + I
Sbjct: 417 YVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDI 476
Query: 556 YEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------- 599
++E+ V ++ G+V D++ V+HDVD E+KE L HSEKLA
Sbjct: 477 NAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRV 536
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH + +SKV +REI +RD RFH G C+CGDYW
Sbjct: 537 MKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 181/342 (52%), Gaps = 24/342 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +V SW ++I+ ++ VEAL F M + P T + SCS ++ G
Sbjct: 71 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H F +FV S+L+DMY+K + +AR++FD +P+ R++VS T++++GY
Sbjct: 131 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPE--RDVVSCTAIISGYA 188
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q EAL LF++ E +C + V ++++A S + + H
Sbjct: 189 QKGLDEEALDLFRQLYSEGMQC------------NHVTFTTLVTALSGLASLDYGKQVHA 236
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++++ V + N+LID Y++ G + SR+VFD M+E+ V+WN+++ Y ++GL E
Sbjct: 237 LILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHE 296
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS-- 330
+ +F + K +VK ++VTL AVL +H G++ G I D V+K E+S ++ T
Sbjct: 297 VISLFKDLHK--EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHTGHY 351
Query: 331 --IIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
IID+ + G+++ A M ++ S W +++ +H
Sbjct: 352 GCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVH 393
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/659 (37%), Positives = 366/659 (55%), Gaps = 70/659 (10%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
+NS++ DL+R G+ + + +R + R +FP +K+ S + L G + H AF
Sbjct: 82 FNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAF 141
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
D FV + L+DMY+ CG ++ AR +FDE+ QR ++V+W +M+ Y + EA
Sbjct: 142 KIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQR--DVVTWNTMIERYCRFGLLDEA 199
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG-- 218
LF+E NV D + + +++SAC R + F+I+
Sbjct: 200 FKLFEEM------------KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVR 247
Query: 219 ------------------------FDSEVGVGN-----TLIDAYARGGHVDVSRKVFDGM 249
F ++ V N ++ Y++ G +D +R +FD
Sbjct: 248 MDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQT 307
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
KD V W ++I+ YA++ EAL VF++M S +K + VT+ +V+ A +LG L
Sbjct: 308 EMKDLVCWTTMISAYAESDHPQEALRVFEEMCCS-GIKPDVVTMLSVISACVNLGTLDKA 366
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K +H LE + + ++I+MY KCG +D AR F +M +NV SW++MI + MH
Sbjct: 367 KWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMH 426
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
A ++L LF +M + V PN +TFV VL CSH+GLV+EG +M E+NI P +EH
Sbjct: 427 GEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEH 486
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
YGCMVDL GRA L+EA ++IE M + + V+WGSL+ ACR+H ++LGE+AAK++ +LE
Sbjct: 487 YGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLE 546
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
P++ G VL+SNIYA RW+ V R +M+ +++ K G S ++L GK H FL+GDK H
Sbjct: 547 PDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRH 606
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
Q +IY L E+ KL+ GYV D SV+ DV++EEK+ + HSEKLA
Sbjct: 607 KQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEK 666
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH +L+SKV + EI+VRD RFH +KDGLCSC DYW
Sbjct: 667 EEEKGSCGVIRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 189/404 (46%), Gaps = 53/404 (13%)
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
A LF I +IV + S+L ++ R +L ++ GG
Sbjct: 66 ALNLFSSISPLPESIV-FNSLLRDLSRSGEPRATILFYQRI----RHVGGR--------F 112
Query: 187 DSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
D ++ +L A S+V+ + EG HGF K S+ V L+D YA G ++ +R
Sbjct: 113 DRISFPPILKAVSKVS--ALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARN 170
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VFD M ++D VTWN++I Y + GL EA +F++M K ++V + + L ++ A G
Sbjct: 171 VFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTG 229
Query: 305 VLRLGKCIHDQVIKMDLE-------------------------------ESVIVGTSIID 333
+R + I+D +I+ D+ ++ V T+++
Sbjct: 230 NMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVS 289
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
Y K G++D AR F+Q + K++ WT MI+ Y +EAL +F +M +G++P+ +T
Sbjct: 290 GYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVT 349
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
+SV+SAC + G + + W++ H +E + ++++ + G L A D+ E M
Sbjct: 350 MLSVISACVNLGTLDKA-KWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKM 408
Query: 454 KVKADFVVWGSLLGACRIHKNV--DLGEIAAKKLFELEPNNCGY 495
+ + V W S++ A +H L A K +EPN +
Sbjct: 409 PTR-NVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTF 451
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
NV SW+S+I A G++ ++L F+ M++ ++ P TF + CS + GK+
Sbjct: 412 NVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK-- 469
Query: 97 QQAFIFGFHRDVFVSSA-------LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
IF D + + ++D++ + L +A ++ + +P N+V W S+++
Sbjct: 470 ----IFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPM-APNVVIWGSLMS 524
Query: 150 G 150
Sbjct: 525 A 525
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/661 (37%), Positives = 381/661 (57%), Gaps = 57/661 (8%)
Query: 22 NTNLTT---LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM---RKLSLTPTRST 75
N NL+ LFN+ +K+ V SWN++++ A+ G EA + F M ++S S
Sbjct: 135 NGNLSAARALFNQMPEKD-VVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSA 193
Query: 76 FPCAIKSCSALHDLHSGK-QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
+ + +G+ + ++ F ++ + L+ Y + L DAR LFD +
Sbjct: 194 Y------------VQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRM 241
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE-----SECGGASENSDNVFVDSV 189
P +R+ +SW M+TGY QN EA LF+E + + + G +N + ++
Sbjct: 242 P--VRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNG--MLDEAT 297
Query: 190 AIASVLSACSRVTVNGVTEG-AHGFVIKRG---FDS----EVGVGNTLIDAYARGGHVDV 241
I + + V+ N + G I++ FD NT++ YA+ G++D
Sbjct: 298 RIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQ 357
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
++ +FD M ++D ++W ++I+ YAQ+G + EAL +F +M + + N L+ L + A
Sbjct: 358 AKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI-LNRSALACALSSCA 416
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+ L LGK +H +++K + I G +++ MY KCG ++ A F + EK++ SW
Sbjct: 417 EIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNT 476
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MIAGY H +EAL LF M K ++P+ +T V VLSACSH G V +G + N+M +
Sbjct: 477 MIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNY 535
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
I +HY CM+DLLGRAG+L EA +L++ M D WG+LLGA RIH + +LGE A
Sbjct: 536 GITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKA 595
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
A+K+FE+EP+N G +VLLSN+YA +GRW +V RS M+++ + K PG+S VE++ K H
Sbjct: 596 AEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHI 655
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
F VGD HP+ E+IY YLEEL+++L++ G+V+ V+HDV++EEKE L+ HSEKLA
Sbjct: 656 FTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVA 715
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
NLRVC DCH I+ ISK+ R+I+VRDS RFH+F +G CSCGDY
Sbjct: 716 FGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDY 775
Query: 644 W 644
W
Sbjct: 776 W 776
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 213/476 (44%), Gaps = 88/476 (18%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTP---------TRSTFPCAIKSCSAL 86
+++ WN I+ R G AL F+ MR+ S + + F CA K +
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D RD+ + ++ Y K G LS AR LF+++P+ +++VSW +
Sbjct: 118 PD-----------------RDLISWNVMLSGYVKNGNLSAARALFNQMPE--KDVVSWNA 158
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
ML+G+ QN EA +F + L++ + ++ +LSA NG
Sbjct: 159 MLSGFAQNGFVEEARKIFDQMLVK----------------NEISWNGLLSA---YVQNGR 199
Query: 207 TEGAHGFVIKRGFDS----EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
E A +R FDS E+ N L+ Y R +D +R +FD M +D ++WN +I
Sbjct: 200 IEDA-----RRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMIT 254
Query: 263 IYAQNGLAAEALDVFDQMV---------------------KSTDV-----KCNAVTLSAV 296
YAQNGL +EA +F+++ ++T + + N V+ +A+
Sbjct: 255 GYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAM 314
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
+ + + + DQ+ + +++ Y +CG +D A+ F++M +++
Sbjct: 315 IAGYVQSQQIEKARELFDQMPSRNTSS----WNTMVTGYAQCGNIDQAKILFDEMPQRDC 370
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW AMI+GY ++ EAL LF KM + G N LS+C+ ++ G L+
Sbjct: 371 ISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQ-LHG 429
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ + G ++ + G+ G ++EA+D+ E + K D V W +++ H
Sbjct: 430 RLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEK-DIVSWNTMIAGYARH 484
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 164/371 (44%), Gaps = 65/371 (17%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M +SS +++V+ + LF++ + + + SW ++I+ A+ G S EAL
Sbjct: 334 MPSRNTSSWNTMVTGYAQCGNIDQAKILFDE-MPQRDCISWAAMISGYAQSGQSEEALHL 392
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F M++ RS CA+ SC+ + L GKQ H + GF +AL+ MY K
Sbjct: 393 FIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGK 452
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG + +A +F++I + ++IVSW +M+ GY ++ +EAL LF+ +
Sbjct: 453 CGSIEEAFDVFEDITE--KDIVSWNTMIAGYARHGFGKEALALFESMKM----------- 499
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+ D V + VLSACS G VD
Sbjct: 500 --TIKPDDVTLVGVLSACSHT-----------------------------------GFVD 522
Query: 241 VSRKVFDGMIEKDAVTWNS-----IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
+ F+ M + +T N+ +I + + G EAL+ ++KS +A T A
Sbjct: 523 KGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALN----LMKSMPFYPDAATWGA 578
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
+L A G LG+ ++V +M+ + S + + ++Y G+ R+ ++M++K
Sbjct: 579 LLGASRIHGDTELGEKAAEKVFEMEPDNSGMY-VLLSNLYAASGRWREVREMRSKMRDKG 637
Query: 356 VRSWTAMIAGY 366
V+ + GY
Sbjct: 638 VKK----VPGY 644
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 145/300 (48%), Gaps = 24/300 (8%)
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V ++ D ++ N ++ Y + G++ +R +F+ M EKD V+WN++++ +AQNG EA
Sbjct: 113 VFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEA 172
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+FDQM+ VK N ++ + +L A G + + + D KMD E ++ ++
Sbjct: 173 RKIFDQML----VK-NEISWNGLLSAYVQNGRIEDARRLFDS--KMDWE--IVSWNCLMG 223
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
Y + ++D AR F++M ++ SW MI GY + EA LF ++ V
Sbjct: 224 GYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDV----FA 279
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
+ +++S G++ E M + + + M+ ++ ++++A +L + M
Sbjct: 280 WTAMVSGFVQNGMLDEATRIFEEMPEKNEVS-----WNAMIAGYVQSQQIEKARELFDQM 334
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF-ELEPNNCGYHVLLSNIYANAGRWEDV 512
+ + W +++ N+D AK LF E+ +C + + YA +G+ E+
Sbjct: 335 PSR-NTSSWNTMVTGYAQCGNID----QAKILFDEMPQRDCISWAAMISGYAQSGQSEEA 389
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 27/244 (11%)
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
+++ D V WN I+ Y + G AL VF+ M + + V NA+ G L
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMI----------SGYLSN 104
Query: 309 GK--CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
K C KM + +I ++ Y K G + AR FNQM EK+V SW AM++G+
Sbjct: 105 NKFDCARKVFEKMP-DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGF 163
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ EA +F +M+ N I++ +LSA G +++ ++ ++
Sbjct: 164 AQNGFVEEARKIFDQMLV----KNEISWNGLLSAYVQNGRIEDARRLFDS-----KMDWE 214
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
+ + C++ R +L +A L + M V+ D + W ++ +N L E A++LF
Sbjct: 215 IVSWNCLMGGYVRKKRLDDARSLFDRMPVR-DKISWNIMITG--YAQNGLLSE--ARRLF 269
Query: 487 ELEP 490
E P
Sbjct: 270 EELP 273
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/637 (38%), Positives = 355/637 (55%), Gaps = 34/637 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+F K V + +V SWN+ I+ G AL M+ L P T +K+C+
Sbjct: 257 AVVFGK-VPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAG 315
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ G+Q H D +++ L+DMY+K G L DA+K+FD IPQR ++V W
Sbjct: 316 SGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQR--DLVLWN 373
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
++++G EAL LF C E D V+ +A+VL + + +
Sbjct: 374 ALISGCSHGAQHAEALSLF---------CRMRKEGFD---VNRTTLAAVLKSTASLEAIS 421
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
T H K GF S+ V N LID+Y + ++ + +VF+ D + + S+I +
Sbjct: 422 DTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALS 481
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q +A+ +F +M++ + + LS++L A A L GK +H +IK V
Sbjct: 482 QCDHGEDAIKLFMEMLRKG-LDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDV 540
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
G +++ Y KCG ++ A AF+ + EK V SW+AMI G H + ALD+F++M+
Sbjct: 541 FAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDE 600
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
+ PN+IT SVL AC+HAGLV E + N+M F IE EHY CM+DLLGRAGKL +
Sbjct: 601 HISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDD 660
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A +L+ M + + VWG+LL A R+H++ +LG +AA+KLF LEP G HVLL+N YA+
Sbjct: 661 AMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYAS 720
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
AG W+DV + R LMK+ ++ K P S VEL+ KVH F+VGDK HP+ IY L+EL
Sbjct: 721 AGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDL 780
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
+ + GYV ++ +HDVD+ EKE+ L HSE+LA NLR+C DC
Sbjct: 781 MTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDC 840
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H + IS +V REI++RD RFH+F+DG CSC DYW
Sbjct: 841 HAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 191/375 (50%), Gaps = 18/375 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ D +V SW+S++ + +AL AF SMR S+ P +K C+
Sbjct: 59 VFDEIPDPCHV-SWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAP-- 114
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G Q H A G D+FV++AL+ MY G + +AR +FDE RN VSW +
Sbjct: 115 DAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCE-RNTVSWNGL 173
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ YV+ND A+ +F E + GG N + V++AC+
Sbjct: 174 MSAYVKNDRCSHAVKVFGEMVW-----GGVQPN-------EFGFSCVVNACTGSRDLEAG 221
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H VI+ G+D +V N L+D Y++ G + ++ VF + E D V+WN+ I+ +
Sbjct: 222 RKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLH 281
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G AL++ QM KS+ + N TLS++L A A G LG+ IH ++K + + +
Sbjct: 282 GHDQHALELLLQM-KSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYI 340
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++DMY K G +D A+K F+ + ++++ W A+I+G + EAL LF +M K G
Sbjct: 341 AFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGF 400
Query: 388 RPNYITFVSVLSACS 402
N T +VL + +
Sbjct: 401 DVNRTTLAAVLKSTA 415
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 171/362 (47%), Gaps = 31/362 (8%)
Query: 114 LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
L+ YSKC AR++FDEIP VSW+S++T Y N R+AL F+
Sbjct: 43 LLSFYSKCRLPGSARRVFDEIPDPCH--VSWSSLVTAYSNNAMPRDALGAFRSMRSCSVR 100
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY 233
C N FV V + A G H + G ++ V N L+ Y
Sbjct: 101 C--------NEFVLPVVLKCAPDA-------GFGTQLHALAMATGLGGDIFVANALVAMY 145
Query: 234 ARGGHVDVSRKVFD-GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
G VD +R VFD E++ V+WN +++ Y +N + A+ VF +MV V+ N
Sbjct: 146 GGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGG-VQPNEFG 204
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
S V+ A L G+ +H VI+ ++ V +++DMY K G + +A F ++
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVP 264
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
E +V SW A I+G +H + AL+L +M +G+ PN T S+L AC+ +G
Sbjct: 265 ETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFN---- 320
Query: 413 WLNTMGHEFNIEPGVEH-----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
L H F ++ + +G +VD+ + G L +A + + + + D V+W +L+
Sbjct: 321 -LGRQIHGFMVKANADSDNYIAFG-LVDMYAKHGLLDDAKKVFDWIPQR-DLVLWNALIS 377
Query: 468 AC 469
C
Sbjct: 378 GC 379
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 120/247 (48%), Gaps = 7/247 (2%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N L+ Y++ +R+VFD + + V+W+S++ Y+ N + +AL F M +S V
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSM-RSCSV 99
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+CN L VL G G +H + L + V +++ MY G VD AR
Sbjct: 100 RCNEFVLPVVLKCAPDAG---FGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARM 156
Query: 347 AFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
F++ E+N SW +++ Y + R A+ +F +M+ GV+PN F V++AC+ +
Sbjct: 157 VFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSR 216
Query: 406 LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
++ G ++ M + V +VD+ + G ++ A ++ G + D V W +
Sbjct: 217 DLEAG-RKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAA-VVFGKVPETDVVSWNAF 274
Query: 466 LGACRIH 472
+ C +H
Sbjct: 275 ISGCVLH 281
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/628 (37%), Positives = 361/628 (57%), Gaps = 37/628 (5%)
Query: 38 VFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ 97
V +W S+I+ + AL F++MR+ ++ P TFPC K+ + + +GKQ H
Sbjct: 73 VVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHG 132
Query: 98 QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA 157
A G DVFV + DMY K G DA +FDE+PQR N+ +W + ++ VQ+ +
Sbjct: 133 LALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQR--NLATWNAYISNAVQDRRS 190
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
+A++ FKEFL E +S+ + L+AC + + H F+++
Sbjct: 191 LDAIVAFKEFLCVHGE------------PNSITFCAFLNACVDMVRLNLGRQLHAFIVRC 238
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAEALDV 276
G+ +V V N LID Y + G + + VF+ + K+ V+W S++A QN A V
Sbjct: 239 GYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMV 298
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F Q K +V+ +S+VL A A LG L LG+ +H +K +E+++ VG++++DMY
Sbjct: 299 FLQARK--EVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYG 356
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA--GVRPNYITF 394
KCG ++ A + F+++ E+N+ +W AMI GY AL LF +M G+RP+Y+T
Sbjct: 357 KCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTL 416
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
+S+LS CS G V+ G +M + IEPG EH+ C+VDLLGR+G + AY+ I+ M
Sbjct: 417 ISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMA 476
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
++ VWG+LLGACR+H +LG+IAA+KLFEL+ + G HV+LSN+ A+AGRWE+
Sbjct: 477 IQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATV 536
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTD 574
R MK+ + K G+S + ++ ++H F D H ++ +I L +L ++E GYV D
Sbjct: 537 VRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPD 596
Query: 575 MTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISK 616
+ D++ EEK + HSEK+A NLR+CGDCH+ I+ IS+
Sbjct: 597 TNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISR 656
Query: 617 VVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+V REI+VRD+ RFH FKDG CSC DYW
Sbjct: 657 IVGREIIVRDNHRFHRFKDGCCSCKDYW 684
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 169/340 (49%), Gaps = 17/340 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ +WN+ I++ + S++A+ AF + P TF + +C + L+ G
Sbjct: 169 MPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLG 228
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H G+ DV V++ LID Y KCG++ A +F+ I R +N+VSW SML V
Sbjct: 229 RQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNR-KNVVSWCSMLAALV 287
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN A ++F + E E +D I+SVLSAC+ + + H
Sbjct: 288 QNHEEERACMVFLQARKE-------VEPTD------FMISSVLSACAELGGLELGRSVHA 334
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+K + + VG+ L+D Y + G ++ + +VF + E++ VTWN++I YA G
Sbjct: 335 LAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDM 394
Query: 273 ALDVFDQM-VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV-IKMDLEESVIVGTS 330
AL +F++M + S ++ + VTL ++L + +G + G I + + + +E
Sbjct: 395 ALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFAC 454
Query: 331 IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + G VD A + M + + W A++ MH
Sbjct: 455 VVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMH 494
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 198/425 (46%), Gaps = 35/425 (8%)
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL 168
F+S+ L++MYSK L+ A+ + +R +V+WTS+++G V N ALL F
Sbjct: 43 FLSNHLVNMYSKLDLLNSAQHVLS--LTHLRTVVTWTSLISGCVHNRRFLPALLHFTNM- 99
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
DNV + V A + V + + HG +K G +V VG +
Sbjct: 100 -----------RRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCS 148
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
D Y + G + +FD M +++ TWN+ I+ Q+ + +A+ F + + +
Sbjct: 149 CFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFL-CVHGEP 207
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
N++T A L A + L LG+ +H +++ +E V V +ID Y KCG + A F
Sbjct: 208 NSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVF 267
Query: 349 NQM-KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
N++ KNV SW +M+A + A +F + K V P SVLSAC+ G +
Sbjct: 268 NRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGL 326
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+ G ++ + + +E + +VD+ G+ G ++ A + + + + V W +++G
Sbjct: 327 ELG-RSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPER-NLVTWNAMIG 384
Query: 468 ACRIHKNVDLGEIAAKKLFE--------LEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
++D+ A +LFE + P+ +V L +I + R VER +
Sbjct: 385 GYAHQGDIDM----ALRLFEEMTLGSHGIRPS----YVTLISILSVCSRVGAVERGIQIF 436
Query: 520 KNRRL 524
++ RL
Sbjct: 437 ESMRL 441
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 123/263 (46%), Gaps = 25/263 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ ++ NV SW S++A L + + A F RK + PT + +C+ L
Sbjct: 266 VFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARK-EVEPTDFMISSVLSACAELG 324
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+ H A ++FV SAL+DMY KCG + +A ++F E+P+ RN+V+W +M
Sbjct: 325 GLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPE--RNLVTWNAM 382
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + AL LF+E L S + V + S+LS CSR V V
Sbjct: 383 IGGYAHQGDIDMALRLFEEMTL----------GSHGIRPSYVTLISILSVCSR--VGAVE 430
Query: 208 EGAHGF-VIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAI 263
G F ++ + E G + ++D R G VD + + M I+ W +++
Sbjct: 431 RGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGA 490
Query: 264 YAQNG------LAAEALDVFDQM 280
+G +AAE L D +
Sbjct: 491 CRMHGKTELGKIAAEKLFELDHV 513
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 308 LGKCIHDQVIKMDLEE-SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
LG+ IH +I+ + + +++MY K ++ A+ + + V +WT++I+G
Sbjct: 24 LGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGC 83
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
+ R AL F M + V+PN TF V A + + G
Sbjct: 84 VHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTG 127
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/626 (38%), Positives = 368/626 (58%), Gaps = 41/626 (6%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N +I L + G +A+R S +P++ T+ I C L + H+
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
G +D F+++ LI MYS G + ARK+FD+ R R I W ++ + E L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT--RKRTIYVWNALFRALTLAGHGEEVL 163
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC--SRVTVNGVTEGA--HGFVIKR 217
L+ + N V D VL AC S TVN + +G H + +R
Sbjct: 164 GLYWKM------------NRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR 211
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
G+ S V + TL+D YAR G VD + VF GM ++ V+W+++IA YA+NG A EAL F
Sbjct: 212 GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271
Query: 278 DQMVKST-DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
+M++ T D N+VT+ +VL A A L L GK IH +++ L+ + V ++++ MY
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYG 331
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
+CG++++ ++ F++M +++V SW ++I+ YG+H ++A+ +F +M+ G P +TFVS
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VL ACSH GLV+EG TM + I+P +EHY CMVDLLGRA +L EA +++ M+ +
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
VWGSLLG+CRIH NV+L E A+++LF LEP N G +VLL++IYA A W++V+R +
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVK 511
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
L+++R L K PG +E+R K+++F+ D+ +P E+I+ +L +L ++E GY+
Sbjct: 512 KLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTK 571
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V+++++ EEKE + HSEKLA NLR+C DCH + ISK +
Sbjct: 572 GVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFM 631
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
++EI+VRD RFH FK+G+CSCGDYW
Sbjct: 632 EKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 22/232 (9%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSL--TPTRSTFPCAIKSCSALHDLHSGKQ 94
NV SW+++IA A+ G + EALR F M + + +P T +++C++L L GK
Sbjct: 247 NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKL 306
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H G + V SAL+ MY +CG+L +++FD + R++VSW S+++ Y +
Sbjct: 307 IHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD--RDVVSWNSLISSYGVH 364
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
++A+ +F+E L GAS V SVL ACS + V EG F
Sbjct: 365 GYGKKAIQIFEEML-----ANGASPT-------PVTFVSVLGACSHEGL--VEEGKRLFE 410
Query: 215 I---KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
G ++ ++D R +D + K+ M E W S++
Sbjct: 411 TMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/670 (36%), Positives = 370/670 (55%), Gaps = 42/670 (6%)
Query: 2 KLSKSSSVSSVVSNVDKHSTN-TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
+L VS+ + N+ K + ++ +F K NV SW+ + A G+ EALR
Sbjct: 88 RLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRH 147
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F M L + T+S + +CS+ + G+ H + GF ++ V++A++ MY +
Sbjct: 148 FRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGR 207
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG + +ARK+FD + + +R++VSW ML+ YV ND ++A+ L++ L
Sbjct: 208 CGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQLRP--------- 258
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
D V S+LSACS G+ H ++ + V VGN L+ YA+ G
Sbjct: 259 ------DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHT 312
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK------STDVKCNAVTLS 294
+R VFD M ++ ++W +II+ Y + L AEA +F QM++ S VK +A+
Sbjct: 313 EARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFV 372
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM-KE 353
+L A A + L GK + +Q L VGT+++++Y KCG+++ AR+ F+ +
Sbjct: 373 TILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSR 432
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
+V+ W AMIA Y ++ EAL LF++M GVRP+ +FVS+L ACSH GL +G +
Sbjct: 433 PDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSY 492
Query: 414 LNTMGHEF-NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+M E+ N+ ++H+GC+ DLLGR G+LKEA + +E + VK D V W SLL ACR H
Sbjct: 493 FTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNH 552
Query: 473 KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSL 532
+++ + A KL LEP +V LSNIYA +W V + R M + + K G S
Sbjct: 553 RDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVST 612
Query: 533 VELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLR 592
+E+ +H F GD HP++ +I E L +L+ +++E GYV D V+H VD++EKE L
Sbjct: 613 IEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLF 672
Query: 593 IHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFK 634
HSE+LA NLRVC DCHT +LISK+ R+IVVRD RFH FK
Sbjct: 673 SHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFK 732
Query: 635 DGLCSCGDYW 644
DG CSC DYW
Sbjct: 733 DGKCSCQDYW 742
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 236/444 (53%), Gaps = 27/444 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+++ N++SW ++A A G S E LRA MR+ + P TF A+ SC L G
Sbjct: 18 LEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDG 77
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ HQ D VS+AL++MY KCG LS A+++F ++ +R RN++SW+ M +
Sbjct: 78 IRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM-ERTRNVISWSIMAGAHA 136
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ N EAL F+ LL + A+ ++LSACS + H
Sbjct: 137 LHGNVWEALRHFRFMLLL------------GIKATKSAMVTILSACSSPALVQDGRMIHS 184
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE--KDAVTWNSIIAIYAQNGLA 270
+ GF+SE+ V N ++ Y R G V+ +RKVFD M E +D V+WN +++ Y N
Sbjct: 185 CIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRG 244
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+A+ ++ +M ++ + VT ++L A + + LG+ +H Q++ +LE++VIVG +
Sbjct: 245 KDAIQLYQRM----QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNA 300
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI---KAG- 386
++ MY KCG AR F++M+++++ SWT +I+ Y EA LF +M+ K G
Sbjct: 301 LVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGS 360
Query: 387 ---VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
V+P+ + FV++L+AC+ +++G ++ + +V+L G+ G++
Sbjct: 361 SQRVKPDALAFVTILNACADVSALEQG-KMVSEQAASCGLSSDKAVGTAVVNLYGKCGEI 419
Query: 444 KEAYDLIEGMKVKADFVVWGSLLG 467
+EA + + + + D +W +++
Sbjct: 420 EEARRIFDAVCSRPDVQLWNAMIA 443
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 182/386 (47%), Gaps = 27/386 (6%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY+ C DA+ FD + Q RN+ SWT ++ + + ++E L +
Sbjct: 1 MYAHCDSPGDAKAAFDALEQ--RNLYSWTGLVAAFAISGQSKETLRALERM--------- 49
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYA 234
D V D+V + L +C + +G H V+ + + V N L++ Y
Sbjct: 50 ---RQDGVRPDAVTFITALGSCG--DPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYK 104
Query: 235 RGGHVDVSRKVFDGMIE-KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ G + +++VF M ++ ++W+ + +A +G EAL F M+ +K +
Sbjct: 105 KCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFML-LLGIKATKSAM 163
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
+L A + +++ G+ IH + E ++V +++ MY +CG V+ ARK F+ M E
Sbjct: 164 VTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDE 223
Query: 354 --KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
++V SW M++ Y + R ++A+ L+ +M +RP+ +T+VS+LSACS A V G
Sbjct: 224 ALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLG- 279
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
L+ +E V +V + + G EA + + M+ ++ + W +++ A
Sbjct: 280 RVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRS-IISWTTIISAYVR 338
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHV 497
+ V +++ ELE N V
Sbjct: 339 RRLVAEACHLFQQMLELEKNGSSQRV 364
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 128/265 (48%), Gaps = 13/265 (4%)
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
++ FD + +++ +W ++A +A +G + E L ++M + V+ +AVT L +
Sbjct: 11 AKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERM-RQDGVRPDAVTFITALGSCG 69
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM-KEKNVRSWT 360
LR G IH V+ LE V ++++MY KCG + A++ F +M + +NV SW+
Sbjct: 70 DPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWS 129
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
M + +H EAL F M+ G++ V++LSACS LVQ+G M H
Sbjct: 130 IMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG-----RMIHS 184
Query: 421 FNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGM-KVKADFVVWGSLLGACRIHKNV 475
G E ++ + GR G ++EA + + M + D V W +L + +H +
Sbjct: 185 CIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIML-STYVHNDR 243
Query: 476 DLGEIAAKKLFELEPNNCGYHVLLS 500
I + +L P+ Y LLS
Sbjct: 244 GKDAIQLYQRMQLRPDKVTYVSLLS 268
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 253/657 (38%), Positives = 376/657 (57%), Gaps = 80/657 (12%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N WN + A D V AL+ + M L L P TFP +KSC+ G
Sbjct: 35 IPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEG 94
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA------------------------- 127
+Q H GF D++V ++LI MY++ G L DA
Sbjct: 95 QQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASR 154
Query: 128 ------RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
+K+FDEIP I+++VSW +M++GY + N ++AL LFKE +
Sbjct: 155 GYIESAQKMFDEIP--IKDVVSWNAMISGYAETGNYKKALELFKEMM------------K 200
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
NV D +A+V+SAC++ + H ++ GF S + + N LID Y++ G V+
Sbjct: 201 TNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVET 260
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ ++ +G+ KD ++WN++I Y L EAL +F +M++S + N VT+ ++L A A
Sbjct: 261 ACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP-NDVTMLSILPACA 319
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVG-----TSIIDMYCKCGQVDLARK-----AFNQM 351
HLG + +G+ IH + K L+ V+ TS+IDMY KCG +D A + AFN
Sbjct: 320 HLGAIDIGRWIHVYIDK-KLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFN-- 376
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
+++ +W AMI G+ MH RA A D+F +M K G+ P+ ITFV +LSACSH+G++ G
Sbjct: 377 --RSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR 434
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
+ +M ++NI P +EHYGCM+DLLG +G KEA ++I M ++ D V+W SLL AC+I
Sbjct: 435 NIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKI 494
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRL-AKTPGF 530
H N++LGE AKKL ++EP N G +VLLSNIYA AG+W +V + R+L+ ++ + K PG
Sbjct: 495 HGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGC 554
Query: 531 SLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMT 590
S +E+ VH F++GDK HPQ+ +IY LEE+ V L+E G+V D + V+ ++++E KE
Sbjct: 555 SSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGA 614
Query: 591 LRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
LR HSEKLA NLRVC +CH +LISK+ REI+ RD R
Sbjct: 615 LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
A F + E N W M G+ + AL L+ MI G+ PN+ TF +L +C+
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGVEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+ +EG GH + ++ Y ++ + + G+L++A + + + D V
Sbjct: 88 SKTFKEGQQ---IHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHR-DVVS 143
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFELEP--NNCGYHVLLSNIYANAGRWED-VERTRSL 518
+ +L+ ++ +A+K+F+ P + ++ ++S YA G ++ +E + +
Sbjct: 144 YTALITGYASRGYIE----SAQKMFDEIPIKDVVSWNAMISG-YAETGNYKKALELFKEM 198
Query: 519 MK 520
MK
Sbjct: 199 MK 200
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 251/659 (38%), Positives = 375/659 (56%), Gaps = 59/659 (8%)
Query: 11 SVVSNVDKHS-TNTNLTTLFNKYVD---KNNVFSWNSVIADLARGGDSVEALRAFSSMRK 66
SV NV S N L +L Y D + + SWN ++A R G EA F+S +
Sbjct: 131 SVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTE 190
Query: 67 LSLTPTRSTFPCAIKSCSALHD--LHSGKQAH-QQAFIFGFHRDVFVSSALIDMYSKCGE 123
S +AL + GK + ++ F RDV + ++ Y++ G+
Sbjct: 191 WDAI-----------SWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGD 239
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ +AR+LFD P +R++ +WT++++GY QN EA +F E S N
Sbjct: 240 MVEARRLFDAAP--VRDVFTWTAVVSGYAQNGMLEEARRVFDAM----PERNAVSWN--- 290
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
A V + R ++ E + + V NT++ YA+ G ++ ++
Sbjct: 291 --------AMVAAYIQRRMMDEAKELFNMMPCR-----NVASWNTMLTGYAQAGMLEEAK 337
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VFD M +KDAV+W +++A Y+Q G + E L +F +M + + N + VL A +
Sbjct: 338 AVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW-VNRSAFACVLSTCADI 396
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L G +H ++I+ VG +++ MY KCG ++ AR AF +M+E++V SW MI
Sbjct: 397 AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMI 456
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
AGY H +EAL++F M +P+ IT V VL+ACSH+GLV++G + +M H+F +
Sbjct: 457 AGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGV 516
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
EHY CM+DLLGRAG+L EA+DL++ M + D +WG+LLGA RIH+N +LG AA+
Sbjct: 517 TAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAE 576
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
K+FELEP N G +VLLSNIYA++G+W D + R +M+ R + K PGFS +E++ KVH F
Sbjct: 577 KIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFS 636
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
GD HP+ EKIY +LE+L++++++ GYV+ V+HDV++EEKE L+ HSEKLA
Sbjct: 637 AGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYG 696
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH + IS + R I++RDS RFH+F+ G CSCGDYW
Sbjct: 697 ILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 171/369 (46%), Gaps = 55/369 (14%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
+V S+ I + + G ++DA +LF +P+R + ++ +ML GY N A LF+
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRR--STSTYNAMLAGYSANGRLPLAASLFRA 94
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVG 226
++ S N + ++A++S L+ RG E+ V
Sbjct: 95 IPRPDN-------YSYNTLLHALAVSSSLADA------------------RGLFDEMPVR 129
Query: 227 -----NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
N +I ++A G V ++R FD EKDAV+WN ++A Y +NG EA +F+
Sbjct: 130 DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN--- 186
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ + +A++ +A++ G + + + D++ D V+ ++ Y + G +
Sbjct: 187 --SRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRD----VVSWNIMVSGYARRGDM 240
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
AR+ F+ ++V +WTA+++GY + EA +F M + N +++ ++++A
Sbjct: 241 VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAY 296
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEP--GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
++ E FN+ P V + M+ +AG L+EA + + M K D
Sbjct: 297 IQRRMMDEA-------KELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK-DA 348
Query: 460 VVWGSLLGA 468
V W ++L A
Sbjct: 349 VSWAAMLAA 357
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 27/274 (9%)
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
+ EV N I A+ R G V + ++F M + T+N+++A Y+ NG A +F
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
+ + + N +L A+A L + + D+ M + +SV +I +
Sbjct: 94 AIPRPDNYSYN-----TLLHALAVSSSLADARGLFDE---MPVRDSVTYNV-MISSHANH 144
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G V LAR F+ EK+ SW M+A Y + R EA LF + + I++ +++
Sbjct: 145 GLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDAISWNALM 200
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPG--VEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
S G VQ W ++ F+ PG V + MV R G + EA L + V+
Sbjct: 201 S-----GYVQ--WGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR 253
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
D W +++ +N L E A+++F+ P
Sbjct: 254 -DVFTWTAVVSG--YAQNGMLEE--ARRVFDAMP 282
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/638 (36%), Positives = 363/638 (56%), Gaps = 56/638 (8%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ LF+K D++ V SWNS+I+ G + L + M L + +T + C+
Sbjct: 205 SELFDKLCDRD-VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L GK H A F R + S+ L+DMYSKCG+L A ++F+++ + RN+VSWT
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE--RNVVSWT 321
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
SM+ GY ++ + A++L ++ + V +D VAI S+L AC+R
Sbjct: 322 SMIAGYTRDGWSDGAIILLQQM------------EKEGVKLDVVAITSILHACARSGSLD 369
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H ++ S + V N L+D YA+ G ++ + VF M+ KD ++WN+++
Sbjct: 370 NGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG--- 426
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
++K ++ T++ +L A A L L GK IH +++
Sbjct: 427 -------------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDR 467
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V +++D+Y KCG + LAR F+ + K++ SWT MIAGYGMH EA+ F +M A
Sbjct: 468 HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDA 527
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ P+ ++F+S+L ACSH+GL+++GW + M ++FNIEP +EHY CMVDLL R G L +
Sbjct: 528 GIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSK 587
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
AY IE + + D +WG+LL CRI+ +++L E A+++FELEP N GY+VLL+NIYA
Sbjct: 588 AYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAE 647
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK-EHPQHEKIYEYLEELNV 564
A + E+V+R R + + L K PG S +E++G+V+ F+ G+ HP +KI L+++
Sbjct: 648 AEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRR 707
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
K++E GY + + D+ +KEM L HSEKLA NLRVCGD
Sbjct: 708 KMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGD 767
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH + + +SK REIV+RDS RFH+FKDG CSC +W
Sbjct: 768 CHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 131/567 (23%), Positives = 242/567 (42%), Gaps = 85/567 (14%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
+ K S ++ S + + ++ + +D + V +N+ I + GD A+
Sbjct: 32 IHKPSLKTTFFSPIFRSCIPVRISATPTRTID-HQVTDYNAKILHFCQLGDLENAMELVC 90
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
+K L T+ ++ C+ L L GK+ H D + L+ Y+ CG
Sbjct: 91 MCQKSELET--KTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCG 148
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+L + R++FD + ++ N+ W M++ Y + + +E++ LFK ++E+ G E++
Sbjct: 149 DLKEGRRVFDTMEKK--NVYLWNFMVSEYAKIGDFKESICLFK-IMVEKGIEGKRPESAS 205
Query: 183 NVF----------------------------------------VDSVAIASVLSACSRVT 202
+F VD I SVL C+
Sbjct: 206 ELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSG 265
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ + H IK F+ + NTL+D Y++ G +D + +VF+ M E++ V+W S+IA
Sbjct: 266 TLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA 325
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
Y ++G + A+ + QM K VK + V ++++L A A G L GK +HD + ++
Sbjct: 326 GYTRDGWSDGAIILLQQMEKE-GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMA 384
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
++ V +++DMY KCG ++ A F+ M K++ SW M+
Sbjct: 385 SNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV------------------- 425
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLG 438
++P+ T +L AC+ ++ G H + + G +VDL
Sbjct: 426 --GELKPDSRTMACILPACASLSALERGKEI-----HGYILRNGYSSDRHVANALVDLYV 478
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH--KNVDLGEIAAKKLFELEPNNCGYH 496
+ G L A L + + K D V W ++ +H N + + +EP+ +
Sbjct: 479 KCGVLGLARLLFDMIPSK-DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF- 536
Query: 497 VLLSNIYA--NAGRWEDVERTRSLMKN 521
+S +YA ++G E R +MKN
Sbjct: 537 --ISILYACSHSGLLEQGWRFFYIMKN 561
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 12/132 (9%)
Query: 25 LTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCS 84
L L + ++ SW +IA G EA+ F+ MR + P +F + +CS
Sbjct: 485 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544
Query: 85 ALHDLHSGKQAHQQAFIFGFHRDVFVSSAL------IDMYSKCGELSDARKLFDEIPQRI 138
HSG F + D + L +D+ S+ G LS A K + +P
Sbjct: 545 -----HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAP 599
Query: 139 RNIVSWTSMLTG 150
+ W ++L G
Sbjct: 600 DATI-WGALLCG 610
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/666 (37%), Positives = 368/666 (55%), Gaps = 74/666 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +F WN++I +R + + M ++ P R TFP +K + L G
Sbjct: 67 IPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYG 126
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K A GF ++FV A I M+S C + ARK+FD +V+W ML+GY
Sbjct: 127 KVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDM--GDAWEVVTWNIMLSGYN 184
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH- 211
+ +++ +LF E E G S NS V + +LSACS++ + G H
Sbjct: 185 RVKQFKKSKMLFIEM-----EKRGVSPNS-------VTLVLMLSACSKL--KDLEGGKHI 230
Query: 212 -----GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
G +++R E N LID +A G +D ++ VFD M +D ++W SI+ +A
Sbjct: 231 YKYINGGIVERNLILE----NVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFAN 286
Query: 267 NGLAAEALDVFDQM------------------------------VKSTDVKCNAVTLSAV 296
G A FDQ+ ++ ++VK + T+ ++
Sbjct: 287 IGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSI 346
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A AHLG L LG+ + + K ++ VG ++IDMY KCG V A+K F +M K+
Sbjct: 347 LTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDK 406
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+WTAMI G ++ EAL +F MI+A + P+ IT++ VL AC+HAG+V++G + +
Sbjct: 407 FTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFIS 466
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M + I+P V HYGCMVDLLGRAG+L+EA+++I M VK + +VWGSLLGACR+HKNV
Sbjct: 467 MTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQ 526
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
L E+AAK++ ELEP N +VLL NIYA RWE++ + R LM R + KTPG SL+EL
Sbjct: 527 LAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELN 586
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
G V+ F+ GD+ HPQ ++IY LE + L + GY D + V D+ +E+KE L HSE
Sbjct: 587 GNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSE 646
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLR+C DCH + +L+S+ +RE++VRD RFH+F+ G C
Sbjct: 647 KLAIAYALISSGPGITIRIVKNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSC 706
Query: 639 SCGDYW 644
SC ++W
Sbjct: 707 SCNNFW 712
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 192/420 (45%), Gaps = 53/420 (12%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQR 137
++ C +++ L KQ H G D +I + G++ AR++FD IPQ
Sbjct: 14 LEKCKSMYQL---KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQ- 69
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ W +M+ GY + ++ + + ++ L + N+ D +L
Sbjct: 70 -PTLFIWNTMIKGYSRINHPQNGVSMYLLML------------ASNIKPDRFTFPFLLKG 116
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
+R + +K GFDS + V I ++ VD++RKVFD + VTW
Sbjct: 117 FTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTW 176
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N +++ Y + ++ +F +M K V N+VTL +L A + L L GK I+ +
Sbjct: 177 NIMLSGYNRVKQFKKSKMLFIEMEKR-GVSPNSVTLVLMLSACSKLKDLEGGKHIYKYIN 235
Query: 318 KMDLEESVIVGTSIIDMYCKC-------------------------------GQVDLARK 346
+E ++I+ +IDM+ C GQ+DLARK
Sbjct: 236 GGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARK 295
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F+Q+ E++ SWTAMI GY R EAL LF +M + V+P+ T VS+L+AC+H G
Sbjct: 296 YFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGA 355
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
++ G W+ T + +I+ ++D+ + G + +A + + M K F W +++
Sbjct: 356 LELG-EWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKF-TWTAMI 413
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 133/283 (46%), Gaps = 11/283 (3%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYA---RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H IK G S+ +I A+ G + +R+VFD + + WN++I Y++
Sbjct: 27 HSHTIKMGLSSDPLFQKRVI-AFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRI 85
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+ ++ M+ S ++K + T +L L+ GK + + +K + ++ V
Sbjct: 86 NHPQNGVSMYLLMLAS-NIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFV 144
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+ I M+ C VDLARK F+ V +W M++GY + +++ LF +M K GV
Sbjct: 145 QKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGV 204
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
PN +T V +LSACS ++ G H + +E + ++D+ G++ EA
Sbjct: 205 SPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGI-VERNLILENVLIDMFAACGEMDEAQ 263
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
+ + MK + D + W S++ +DL A+K F+ P
Sbjct: 264 SVFDNMKNR-DVISWTSIVTGFANIGQIDL----ARKYFDQIP 301
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 350/597 (58%), Gaps = 42/597 (7%)
Query: 71 PTRSTFPCAIKSCSAL-HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P+ T P A+KS S L H L +G+Q H ++ H + V ++L+ +Y+KCG L A++
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FDE+P + V WT+++T Y+ + REA+ + + ++ + DS
Sbjct: 128 VFDEMPHP--STVPWTALITAYMDAGDLREAVHVARNAF------------ANGMRPDSF 173
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
VL+AC+R+ E + G V V +D Y + G + +R+VFD M
Sbjct: 174 TAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM 233
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
KDAV W +++ YA NG EALD+F M ++ +K + ++ L A LG L LG
Sbjct: 234 RHKDAVAWGAMVGGYASNGHPREALDLFLAM-QAEGMKPDCYAVAGALSACTRLGALDLG 292
Query: 310 KCIHDQVIKM----DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
+ Q I+M + ++ ++GT++IDMY KCG A F QM++K++ W AMI G
Sbjct: 293 R----QAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILG 348
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
GM + A L +M K+GV+ N TF+ +L +C+H GL+Q+G + + M ++I P
Sbjct: 349 LGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 408
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
+EHYGCMVDLL RAG L+EA+ L++ M + A+ V+ G+LLG C+IH+N +L E K+L
Sbjct: 409 RIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQL 468
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
LEP N G +V+LSNIY+N GRWED + R MK + + K P S VE GKVH F VG
Sbjct: 469 ILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVG 528
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
DK HP ++IY+ L+EL ++++ +GY V+ DV+ EEKE TL HSEKLA
Sbjct: 529 DKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLL 588
Query: 600 ------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT I+L+S++ REI+VRD+ RFH F+DG CSC DYW
Sbjct: 589 ITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 160/340 (47%), Gaps = 27/340 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALR----AFSS-MRKLSLTPTRSTFPCAIKSCSALHDLHS 91
+ W ++I GD EA+ AF++ MR S T R + +C+ + DL +
Sbjct: 136 STVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVR-----VLTACARIADLAT 190
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ + A G + VFV++A +D+Y KCGE++ AR++FD++ R ++ V+W +M+ GY
Sbjct: 191 GETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM--RHKDAVAWGAMVGGY 248
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
N + REAL LF + ++ + D A+A LSAC+R+ + A
Sbjct: 249 ASNGHPREALDLF------------LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAI 296
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
V F +G LID YA+ G + VF M +KD + WN++I G
Sbjct: 297 RMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEK 356
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTS 330
A + QM KS VK N T +L + H G+++ G + H+ + +
Sbjct: 357 IAFALVGQMEKS-GVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC 415
Query: 331 IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + G + A + + M N A++ G +H
Sbjct: 416 MVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIH 455
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K K+ V +W +++ A G EAL F +M+ + P A+ +C+ L
Sbjct: 229 VFDKMRHKDAV-AWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLG 287
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+QA + F + + +ALIDMY+KCG +A +F ++ R ++I+ W +M
Sbjct: 288 ALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQM--RKKDIIVWNAM 345
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
+ G + + A L + E G N DN F+
Sbjct: 346 ILGLGMTGHEKIAFALVGQM-----EKSGVKLN-DNTFI 378
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 2/152 (1%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K ++ WN++I L G A M K + +TF + SC+ + G++
Sbjct: 336 KKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR 395
Query: 95 A-HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H ++ + ++D+ S+ G L +A +L D++P N V ++L G
Sbjct: 396 YFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPA-NAVILGALLGGCKI 454
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVF 185
+ N A + K+ +L E G N++
Sbjct: 455 HRNTELAEHVLKQLILLEPWNSGNYVMLSNIY 486
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/637 (37%), Positives = 374/637 (58%), Gaps = 36/637 (5%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
T+FN + + ++ SWNSVIA +A+ VEA+ F + + L P T +K+ S+L
Sbjct: 378 TVFNN-MSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSL 436
Query: 87 HD-LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ L KQ H A D FVS+ALID YS+ + +A LF + ++V+W
Sbjct: 437 PEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFG---RNNFDLVAWN 493
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M++GY Q+ + + L LF L+ + E SD+ +A+VL C +
Sbjct: 494 AMMSGYTQSHDGHKTLELFA--LMHKQ-----GERSDDF-----TLATVLKTCGFLFAIN 541
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H + IK G+D ++ V + ++D Y + G + ++ FD + D V W ++I+
Sbjct: 542 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCI 601
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+NG AL VF QM + V + T++ + A + L L G+ IH +K++
Sbjct: 602 ENGEEERALHVFSQM-RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDP 660
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VGTS++DMY KCG +D A F +++ N+ +W AM+ G H +EAL LF +M
Sbjct: 661 FVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESL 720
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G++P+ +TF+ VLSACSH+GLV E + ++ +M ++ I+P +EHY C+ D LGRAG +KE
Sbjct: 721 GIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKE 780
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A +LI+ M ++A ++ +LL ACR+ + + G+ A KL ELEP + +VLLSN+YA
Sbjct: 781 AENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAA 840
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
A +W++++ R++MK ++ K PGFS +E++ K+H F+V D+ +PQ E IY+ ++++
Sbjct: 841 ASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRD 900
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
+++ GYV + + DV++EEKE L HSEKLA NLRVCGDC
Sbjct: 901 IKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDC 960
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H ++ ISKV DREIV+RD+ RFH FKDG+CSCGDYW
Sbjct: 961 HNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 238/533 (44%), Gaps = 88/533 (16%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSV-----EALRAFSS 63
V++++S K + T +F+K +++ V SWNS++A A+ + V EA F
Sbjct: 84 VNNLISMYSKCGSLTYARRVFDKMPERDLV-SWNSILAAYAQSSEGVVENVKEAFLLFRI 142
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSG-----KQAHQQAFIFGFHRDVFVSSALIDMY 118
+R+ + +R T +K C LHSG + H A G D FV+ AL+++Y
Sbjct: 143 LRQDVVYTSRMTLSPMLKLC-----LHSGYVCASESFHGYACKIGLDGDDFVAGALVNIY 197
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF----------- 167
K G++ + R LF+E+P R++V W ML Y++ EA+ L F
Sbjct: 198 LKFGKVKEGRVLFEEMP--YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEIT 255
Query: 168 --LL-----EESECGGAS--ENSDNV----------------------------FVD--- 187
LL ++SE G EN ++ F+D
Sbjct: 256 LRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVE 315
Query: 188 ------SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
V VL+ R+ + + H +K G D + V N+LI+ Y + + +
Sbjct: 316 SDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGL 375
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R VF+ M E+D ++WNS+IA AQ+ L EA+ +F Q+++ +K + T+++VL A +
Sbjct: 376 ARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLR-CGLKPDHYTMTSVLKAAS 434
Query: 302 HLGV-LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
L L L K IH IK + V T++ID Y + + A F + ++ +W
Sbjct: 435 SLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWN 493
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
AM++GY + L+LF M K G R + T +VL C + +G H
Sbjct: 494 AMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQG-----KQVHA 548
Query: 421 FNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
+ I+ G + ++D+ + G + A + + V D V W +L+ C
Sbjct: 549 YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD-VAWTTLISGC 600
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 205/436 (47%), Gaps = 27/436 (6%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
+ + S N +++ G L+ F M + L + TF + + L L G+Q
Sbjct: 285 SEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQV 344
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H A G + VS++LI+MY K ++ AR +F+ + + R+++SW S++ G Q+D
Sbjct: 345 HCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSE--RDLISWNSVIAGIAQSD 402
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN-GVTEGAHGFV 214
EA+ LF + L CG + D + SVL A S + +++ H
Sbjct: 403 LEVEAVCLFMQLL----RCG--------LKPDHYTMTSVLKAASSLPEGLSLSKQIHVHA 450
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
IK ++ V LIDAY+R + + +F G D V WN++++ Y Q+ + L
Sbjct: 451 IKTNNVADSFVSTALIDAYSRNRCMKEAEVLF-GRNNFDLVAWNAMMSGYTQSHDGHKTL 509
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
++F M K + + + TL+ VL L + GK +H IK + + V + I+DM
Sbjct: 510 ELFALMHKQGE-RSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDM 568
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y KCG + A+ AF+ + + +WT +I+G + AL +F +M GV P+ T
Sbjct: 569 YVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTI 628
Query: 395 VSVLSACSHAGLVQEGWHW-LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL---I 450
++ A S +++G N + +P V +VD+ + G + +AY L I
Sbjct: 629 ATLAKASSCLTALEQGRQIHANALKLNCTSDPFVG--TSLVDMYAKCGSIDDAYCLFKRI 686
Query: 451 EGMKVKADFVVWGSLL 466
E M + A W ++L
Sbjct: 687 EMMNITA----WNAML 698
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 173/390 (44%), Gaps = 91/390 (23%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL GK H + + + F+ + LI MYSKCG L+ AR++FD++P+R ++VSW S+
Sbjct: 61 DLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPER--DLVSWNSI 118
Query: 148 LTGYVQN-----DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
L Y Q+ +N +EA LLF+ D V+ + ++ +L C
Sbjct: 119 LAAYAQSSEGVVENVKEAFLLFRIL------------RQDVVYTSRMTLSPMLKLCLHSG 166
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+E HG+ K G D + V L++ Y + G V R +F+ M +D V WN ++
Sbjct: 167 YVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLK 226
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTL-------------------------SAVL 297
Y + G EA+D+ ++ + N +TL SAV
Sbjct: 227 AYLEMGFKEEAIDL-SSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVS 285
Query: 298 LAIAHLGVLR----------LGKCIHDQVIKMDLE----------------ESVIVGTSI 331
I+ +L L KC D V + DLE +S+ +G +
Sbjct: 286 EIISRNKILSGYLHAGQYSALLKCFMDMV-ESDLECDQVTFILVLATAVRLDSLALGQQV 344
Query: 332 -------------------IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
I+MYCK ++ LAR FN M E+++ SW ++IAG
Sbjct: 345 HCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLE 404
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSACS 402
EA+ LF ++++ G++P++ T SVL A S
Sbjct: 405 VEAVCLFMQLLRCGLKPDHYTMTSVLKAAS 434
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L LGKC H +++ ++ + ++I MY KCG + AR+ F++M E+++ SW +++A
Sbjct: 62 LMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAA 121
Query: 366 Y-----GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV--QEGWHWLNTMG 418
Y G+ +EA LF + + V + +T +L C H+G V E +H G
Sbjct: 122 YAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFH-----G 176
Query: 419 HEFNIEPGVEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ I + + G +V++ + GK+KE L E M + D V+W +L A
Sbjct: 177 YACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYR-DVVLWNLMLKA 227
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/633 (37%), Positives = 371/633 (58%), Gaps = 44/633 (6%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC---AIKSCSALHDLHS 91
N+V I+ L G EAL + + L P F C + +C L
Sbjct: 16 PNSVLQTFRPISQLCSNGRLQEAL-----LEMVMLGP-EIGFHCYDALLNACLDKRALRE 69
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G++ H + ++ + L+ Y KC L DARK+ DE+P++ N+VSWT+M++ Y
Sbjct: 70 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK--NVVSWTAMISRY 127
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
Q ++ EAL +F E + S+ N F A+VL++C R + + + H
Sbjct: 128 SQTGHSSEALSVFAEMM--------RSDGKPNEFT----FATVLTSCIRASGLALGKQIH 175
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
G ++K +DS + VG++L+D YA+ G ++ +R++F+ + E+D V+ +IIA YAQ GL
Sbjct: 176 GLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDE 235
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EAL++F Q ++S ++ N VT +++L A++ L +L GK H V++ +L ++ S+
Sbjct: 236 EALEMF-QRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 294
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI-KAGVRPN 390
IDMY KCG + A++ F+ M E+ SW AM+ GY H RE L+LF M + V+P+
Sbjct: 295 IDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 354
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTM-GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+T ++VLS CSH + G + M E+ I+P EHYGC+VD+LGRAG++ EA++
Sbjct: 355 AVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEF 414
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I+ M K V GSLLGACR+H +VD+GE +L E+EP N G +V+LSN+YA+AGRW
Sbjct: 415 IKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRW 474
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
EDV R++M + + K PG S ++ +H F D+ HP+ E++ ++E+++K+++
Sbjct: 475 EDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQA 534
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GYV D++ V++DVD+E+KE L HSEKLA NLR+C DCH
Sbjct: 535 GYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFA 594
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
++ SKV +RE+ +RD RFH G+CSCGDYW
Sbjct: 595 KIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/626 (37%), Positives = 365/626 (58%), Gaps = 32/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
NV SW +I+ LA+ VEA+ F M + P T + + + L + K H
Sbjct: 86 NVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVH 145
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
GF +VFV +AL+DMYSK G + AR+LF+ + +R N+V+W ++++GY +
Sbjct: 146 CFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSER--NVVTWNAIVSGYSDHGF 203
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+ EA+ LF L+ + VD I S++ A V V G HGF+I+
Sbjct: 204 SEEAIDLFN--LMRRK----------GLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIR 251
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G++++ + L+D Y VD + +VF M KD W ++ ++ A+
Sbjct: 252 TGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKH 311
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F++M+ ++K +++ L +L + +H G L+ G+ +H IK ++ VG+++IDMY
Sbjct: 312 FNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYA 371
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
CG ++ A++ F M EK+V W AMIAG GM+ +A+DLF +M +G+ P+ TFVS
Sbjct: 372 NCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVS 431
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VL ACSHAG+V EG M ++ P ++HY C++D+LGRAG+L AY I M +
Sbjct: 432 VLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQ 491
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
DF V+ +LLGACRIH N+ LG ++K+FE+EPN+ GY+VLLSN+YA AG WE V+ TR
Sbjct: 492 PDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTR 551
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
+ ++++R+ K PGFS +E+ +++ F+ G+K+HPQ+ KI L+ L +K+++ GYV +
Sbjct: 552 ASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTN 611
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
++ DV + K+ L HSEK+A NLR C DCHT + +SKV
Sbjct: 612 VLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVF 671
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
R +V++D+ RFH F+DG+CSC DYW
Sbjct: 672 GRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 221/412 (53%), Gaps = 21/412 (5%)
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALH---DLHSGKQAHQQAFIFGFHRDVFVSSALIDM 117
F+ R LS PT+ P A S L DL +Q H Q G + F+S++L++
Sbjct: 6 FNFYRHLSSNPTQRLSPLAQPHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNA 65
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
Y CG L+DA+++F P +N+VSWT +++G +ND EA+ +F+E ++
Sbjct: 66 YVYCGLLADAKQIFHHTPY--KNVVSWTILISGLAKNDCFVEAIDVFREMIM-------- 115
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
N ++V I+SVL A + + + + + H F ++ GF+ V V L+D Y++ G
Sbjct: 116 ----GNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFG 171
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
+ V+R++F+ M E++ VTWN+I++ Y+ +G + EA+D+F+ M + + + T+ +++
Sbjct: 172 CMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLM-RRKGLLVDFYTIMSLI 230
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A +G L++G IH +I+ E + T+++D+Y VD A + F++M K+V
Sbjct: 231 PASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVA 290
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIK-AGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+WT M+ G+ A+ F KM+ ++ + I + +LS+CSH+G +Q+G ++
Sbjct: 291 AWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQG-RRVHA 349
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ + + ++D+ G L++A GM K D V W +++
Sbjct: 350 LAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEK-DVVCWNAMIAG 400
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 181/369 (49%), Gaps = 18/369 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV +WN++++ + G S EA+ F+ MR+ L T I + ++ L G
Sbjct: 183 MSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H G+ D + +AL+D+Y + DA ++F E+ ++++ +WT MLTG+
Sbjct: 243 TGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEM--SVKDVAAWTLMLTGFS 300
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ A+ F + L N+ +DS+A+ +LS+CS H
Sbjct: 301 SGRHWDRAIKHFNKML-----------GIQNLKLDSIALMGILSSCSHSGALQQGRRVHA 349
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
IK F + + VG+ +ID YA G+++ +++ F GM EKD V WN++IA NG +
Sbjct: 350 LAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTD 409
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGTSI 331
A+D+F QM K + + + T +VL A +H G++ G I ++K + ++ +
Sbjct: 410 AIDLFLQM-KGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACV 468
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
ID+ + GQ+D A N M + + ++ ++ +H + ++ K+ + + PN
Sbjct: 469 IDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFE--MEPN 526
Query: 391 YITFVSVLS 399
+ +LS
Sbjct: 527 DAGYYVLLS 535
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 298 LAIAHLGVLRLGK------CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
LA H +LR K IH Q+I L + + S+++ Y CG + A++ F+
Sbjct: 23 LAQPHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHT 82
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
KNV SWT +I+G + EA+D+F +MI +PN +T SVL A ++ GL++
Sbjct: 83 PYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIR--- 139
Query: 412 HWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+ H F + G E +VD+ + G + A L E M + + V W +++
Sbjct: 140 --IAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSER-NVVTWNAIVS 196
Query: 468 ACRIH----KNVDLGEIAAKK 484
H + +DL + +K
Sbjct: 197 GYSDHGFSEEAIDLFNLMRRK 217
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/635 (38%), Positives = 363/635 (57%), Gaps = 35/635 (5%)
Query: 29 FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD 88
FN ++ N+ SWN+++A ++ + L+ F M K A+K+C L
Sbjct: 70 FN-HITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSL 128
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
K H A D +V+ AL+++Y++ G L +A K+F+E+P ++N V W M+
Sbjct: 129 FQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVP--LKNSVIWGVMI 186
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
G++ N E +F+ F + +D + ++ AC V +
Sbjct: 187 KGHL---NFSEEFGVFELF---------SRMRRSGFELDPFVVEGLIQACGNVYAGKEGK 234
Query: 209 GAHGFVIKRGF-DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
HG IK+ F DS + +L+D Y + G +D + K+F+ + +D V W++IIA +A+N
Sbjct: 235 TFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARN 294
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A E++ +F QM+ + V N+VT ++++LA + LG L+ G+ +H +I+ +E V
Sbjct: 295 GRALESISMFRQMLADS-VTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKN 353
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
TS IDMY KCG + A + F Q+ EKNV SW+ MI G+GMH EAL+LFY+M
Sbjct: 354 YTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQ 413
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
PN +TFVSVLSACSH+G ++EGW +M ++ I P EHY CMVDLLGRAGK+ EA
Sbjct: 414 LPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEAL 473
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I M + WG+LLGACRIH+ +L E AKKL LE + G +V+LSNIYA+ G
Sbjct: 474 SFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVG 533
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
WE V++TR M + + K GF+ +E+ K++ F D+ ++ +I L +++
Sbjct: 534 MWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMR 593
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E+GYV D+ V+HDVD E K+ L HSEKLA N+RVCGDCHT
Sbjct: 594 ELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHT 653
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ IS + R+I++RD KRFH+ +DG+CSCGDYW
Sbjct: 654 ASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 117/249 (46%), Gaps = 14/249 (5%)
Query: 226 GNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD 285
G + AY + G + V+ K F+ + ++ +WN+I+A +++N + L +F +M+K
Sbjct: 50 GPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGK 109
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
+ ++ L + A L + + K H IK+ LE V +++++Y + G ++ A
Sbjct: 110 L-VDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAH 168
Query: 346 KAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
K F ++ KN W MI G+ +LF +M ++G + ++ AC +
Sbjct: 169 KVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVY 228
Query: 406 LVQEG--WHWL----NTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
+EG +H L N + F ++ +VD+ + G L A L E + + D
Sbjct: 229 AGKEGKTFHGLCIKKNFIDSNFFLQTS------LVDMYMKCGFLDFALKLFEEISYR-DV 281
Query: 460 VVWGSLLGA 468
VVW +++
Sbjct: 282 VVWSAIIAG 290
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
++ Q++ L S++ G I Y + G + +A KAFN + +N+ SW ++A + +
Sbjct: 34 LNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKC 93
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
+ L LF +M+K G + V + AC L Q G +++ + +E
Sbjct: 94 FYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQ-GAKLFHSLAIKLRLEGDPYVAP 152
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL-GACRIHKNVDLGEIAAKKL---FE 487
++++ G L+EA+ + E + +K + V+WG ++ G + + E+ ++ FE
Sbjct: 153 ALMNVYTELGSLEEAHKVFEEVPLK-NSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFE 211
Query: 488 LEP 490
L+P
Sbjct: 212 LDP 214
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/655 (37%), Positives = 356/655 (54%), Gaps = 66/655 (10%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
+++I+ G EA+R ++S+R + P S F K+C A D K+ H A
Sbjct: 101 STLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIR 160
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
G D F+ +ALI Y KC + AR++FD++ ++++VSWTSM + YV R L
Sbjct: 161 CGMMSDAFLGNALIHAYGKCKCVEGARRVFDDL--VVKDVVSWTSMSSCYVNCGLPRLGL 218
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
+F E + V +SV ++S+L ACS + HGF ++ G
Sbjct: 219 AVFCEM------------GWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIE 266
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM- 280
V V + L+ YAR V +R VFD M +D V+WN ++ Y N + L +F QM
Sbjct: 267 NVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMS 326
Query: 281 ---------------------------------VKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+++ K N +T+S+ L A + L LR
Sbjct: 327 SKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLR 386
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
+GK +H V + L + T+++ MY KCG ++L+R F+ + K+V +W MI
Sbjct: 387 MGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANA 446
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
MH RE L LF M+++G++PN +TF VLS CSH+ LV+EG N+MG + +EP
Sbjct: 447 MHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDA 506
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
HY CMVD+ RAG+L EAY+ I+ M ++ WG+LLGACR++KNV+L +I+A KLFE
Sbjct: 507 NHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFE 566
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
+EPNN G +V L NI A W + R LMK R + KTPG S +++ +VH F+VGDK
Sbjct: 567 IEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVVGDK 626
Query: 548 EHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------- 599
+ + +KIY +L+EL K++ GY D V+ D+DQEEK +L HSEKLA
Sbjct: 627 NNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGILNL 686
Query: 600 ----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCH I+ +SKVV I+VRDS RFH+F++G CSC D W
Sbjct: 687 NGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDLW 741
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 173/376 (46%), Gaps = 33/376 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ V K+ V SW S+ + G L F M + P T + +CS L
Sbjct: 189 VFDDLVVKD-VVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELK 247
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL SG+ H A G +VFV SAL+ +Y++C + AR +FD +P R++VSW +
Sbjct: 248 DLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPH--RDVVSWNGV 305
Query: 148 LTGYVQNDNAREALLLFKEFLLEESEC---------GGASENSDN--------------V 184
LT Y N + L LF + + E GG EN
Sbjct: 306 LTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGF 365
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
+ + I+S L ACS + + + H +V + ++ L+ YA+ G +++SR
Sbjct: 366 KPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRN 425
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VFD + KD V WN++I A +G E L +F+ M++S +K N+VT + VL +H
Sbjct: 426 VFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQS-GIKPNSVTFTGVLSGCSHSR 484
Query: 305 VLRLGKCIHDQVIKMDL-EESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAM 362
++ G I + + + L E ++D++ + G++ A + +M E +W A+
Sbjct: 485 LVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGAL 544
Query: 363 IAGYGMHCRAREALDL 378
+ CR + ++L
Sbjct: 545 LGA----CRVYKNVEL 556
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 144/296 (48%), Gaps = 15/296 (5%)
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G+ A++LFD IPQ + + +++++ + EA+ L+ AS +
Sbjct: 80 GDFRRAQQLFDNIPQP--DPTTCSTLISAFTTRGLPNEAIRLY------------ASLRA 125
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
+ + +V AC + H I+ G S+ +GN LI AY + V+
Sbjct: 126 RGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEG 185
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R+VFD ++ KD V+W S+ + Y GL L VF +M VK N+VTLS++L A +
Sbjct: 186 ARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEM-GWNGVKPNSVTLSSILPACS 244
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
L L+ G+ IH ++ + E+V V ++++ +Y +C V AR F+ M ++V SW
Sbjct: 245 ELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNG 304
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
++ Y + + L LF +M GV + T+ +V+ C G ++ L M
Sbjct: 305 VLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKM 360
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 124/258 (48%), Gaps = 11/258 (4%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+G L+ A G ++++FD + + D T +++I+ + GL EA+ ++ + ++
Sbjct: 68 LGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASL-RAR 126
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+K + V A G K +HD I+ + +G ++I Y KC V+ A
Sbjct: 127 GIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGA 186
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R+ F+ + K+V SWT+M + Y R L +F +M GV+PN +T S+L ACS
Sbjct: 187 RRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSEL 246
Query: 405 GLVQEGWHWLNTMGHEFNIEPG-VEH-YGC--MVDLLGRAGKLKEAYDLIEGMKVKADFV 460
++ G H F + G +E+ + C +V L R +K+A + + M + D V
Sbjct: 247 KDLKSG-----RAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHR-DVV 300
Query: 461 VWGSLLGACRIHKNVDLG 478
W +L A ++ D G
Sbjct: 301 SWNGVLTAYFTNREYDKG 318
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
NL+ + + +V +WN++I A G+ E L F SM + + P TF + C
Sbjct: 421 NLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGC 480
Query: 84 SALHDLHSGKQAHQQAFIF-GFHRDVFVS------SALIDMYSKCGELSDARKLFDEIPQ 136
S + G Q IF RD V + ++D++S+ G L +A + +P
Sbjct: 481 SHSRLVEEGLQ------IFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPM 534
Query: 137 RIRNIVSWTSML 148
+W ++L
Sbjct: 535 E-PTASAWGALL 545
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/626 (37%), Positives = 364/626 (58%), Gaps = 32/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
NV SW +I+ LA+ VEA+ F M + P T + + + L + K H
Sbjct: 86 NVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVH 145
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
GF +VFV +AL+DMYSK G + AR+LF+ + +R N+VSW ++++GY +
Sbjct: 146 CFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSER--NVVSWNAIVSGYSDHGF 203
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+ EA+ LF L+ + VD I S++ A V V G HGF+I+
Sbjct: 204 SEEAIDLFN--LMRRK----------GLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIR 251
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G++++ + L+D Y VD + +VF M KD W ++ ++ A+
Sbjct: 252 TGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKH 311
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F++M+ ++K +++ L +L + +H G L+ G+ +H IK ++ VG+++IDMY
Sbjct: 312 FNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYA 371
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
CG ++ A++ F M EK+V W AMIAG GM+ +A+DLF +M +G+ P+ TFVS
Sbjct: 372 NCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVS 431
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VL ACSHAG+V EG M + P ++HY C++D+LGRAG+L AY I M +
Sbjct: 432 VLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQ 491
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
DF V+ +LLGACRIH N+ LG ++K+FE+EPN+ GY+VLLSN+YA AG WE V+ TR
Sbjct: 492 PDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTR 551
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
+ ++++RL K PGFS +E+ +++ F+ G+K+HPQ+ KI L+ L +K+++ GYV +
Sbjct: 552 ASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTN 611
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
++ DV + K+ L HSEK+A NLR C DCH+ + +SKV
Sbjct: 612 VLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVF 671
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
R +V++D+ RFH F+DG+CSC DYW
Sbjct: 672 GRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 220/412 (53%), Gaps = 21/412 (5%)
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALH---DLHSGKQAHQQAFIFGFHRDVFVSSALIDM 117
F+ R LS PT+ P A S L DL +Q H Q G + F+S++L++
Sbjct: 6 FNFYRHLSSNPTQRLCPLAQSHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNA 65
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
Y CG L+DA+++F P +N+VSWT +++G +ND EA+ +F+E +
Sbjct: 66 YVYCGLLADAKQIFHHTP--CKNVVSWTILISGLAKNDCFVEAIDVFREMTM-------- 115
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
N ++V I+SVL A + + + + + H F ++ GF+ V V L+D Y++ G
Sbjct: 116 ----GNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFG 171
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
+ V+R++F+ M E++ V+WN+I++ Y+ +G + EA+D+F+ M + + + T+ +++
Sbjct: 172 CMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLM-RRKGLLVDFYTIMSLI 230
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A +G L++G IH +I+ E + T+++D+Y VD A + F++M K+V
Sbjct: 231 PASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVA 290
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIK-AGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+WT M+ G+ A+ F KM+ ++ + I + +LS+CSH+G +Q+G ++
Sbjct: 291 AWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQG-RRVHA 349
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ + + ++D+ G L++A GM K D V W +++
Sbjct: 350 LAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEK-DVVCWNAMIAG 400
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 180/369 (48%), Gaps = 18/369 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SWN++++ + G S EA+ F+ MR+ L T I + ++ L G
Sbjct: 183 MSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H G+ D + +AL+D+Y + DA ++F E+ ++++ +WT MLTG+
Sbjct: 243 TGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEM--FVKDVAAWTLMLTGFS 300
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ A+ F + L N+ +DS+ + +LS+CS H
Sbjct: 301 SGRHWDRAIKHFNKML-----------GIQNLKLDSIVLMGILSSCSHSGALQQGRRVHA 349
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
IK F + + VG+ +ID YA G+++ +++ F GM EKD V WN++IA NG +
Sbjct: 350 LAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTD 409
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE-ESVIVGTSI 331
A+D+F QM K + + + T +VL A +H G++ G I ++K + ++ +
Sbjct: 410 AIDLFLQM-KGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACV 468
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
ID+ + GQ+D A N M + + ++ ++ +H + ++ K+ + + PN
Sbjct: 469 IDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFE--MEPN 526
Query: 391 YITFVSVLS 399
+ +LS
Sbjct: 527 DAGYYVLLS 535
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 298 LAIAHLGVLRLGK------CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
LA +H +LR K IH Q+I L + + S+++ Y CG + A++ F+
Sbjct: 23 LAQSHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHT 82
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
KNV SWT +I+G + EA+D+F +M +PN +T SVL A ++ GL++
Sbjct: 83 PCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIR--- 139
Query: 412 HWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+ H F + G E +VD+ + G + A L E M + + V W +++
Sbjct: 140 --IAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSER-NVVSWNAIVS 196
Query: 468 ACRIH----KNVDLGEIAAKK 484
H + +DL + +K
Sbjct: 197 GYSDHGFSEEAIDLFNLMRRK 217
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 260/669 (38%), Positives = 379/669 (56%), Gaps = 63/669 (9%)
Query: 2 KLSKSSSVS--SVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
K+ + ++VS ++S K+ + +F+ D+N V SW S++ R GD EA R
Sbjct: 80 KMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRN-VVSWTSMVRGYVRNGDVAEAER 138
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK-QAHQQAFIFGFHRDVFVSSALIDMY 118
F M P ++ + L + G+ ++ F +DV + +I Y
Sbjct: 139 LFWHM------PHKNVVSWTVMLGGLLQE---GRVDDARKLFDMMPEKDVVAVTNMIGGY 189
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
+ G L +AR LFDE+P+R N+V+WT+M++GY +N A LF E + E +E
Sbjct: 190 CEEGRLDEARALFDEMPKR--NVVTWTAMVSGYARNGKVDVARKLF-EVMPERNE----- 241
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS----EVGVGNTLIDAYA 234
V+ ++L T +G A FD+ V V N +I +
Sbjct: 242 ----------VSWTAMLLG---YTHSGRMREASSL-----FDAMPVKPVVVCNEMIMGFG 283
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
G VD +R+VF GM E+D TW+++I +Y + G EAL +F +M + + N +L
Sbjct: 284 LNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRM-QREGLALNFPSLI 342
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
+VL L L GK +H Q+++ + ++ + V + +I MY KCG + A++ FN+ K
Sbjct: 343 SVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLK 402
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
+V W +MI GY H EAL++F+ M +GV P+ +TF+ VLSACS++G V+EG
Sbjct: 403 DVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELF 462
Query: 415 NTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
TM ++ +EPG+EHY C+VDLLGRA ++ EA L+E M ++ D +VWG+LLGACR H
Sbjct: 463 ETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMK 522
Query: 475 VDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVE 534
+DL E+A +KL +LEP N G +VLLSN+YA GRW DVE R +K R + K PG S +E
Sbjct: 523 LDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIE 582
Query: 535 LRGKVHAFLVGD-KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
+ KVH F GD K HP+ I + LE+L L+E GY D + V+HDVD+EEK +L
Sbjct: 583 VEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGY 642
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSEKLA NLRVCGDCH+ I+LI+KV REI++RD+ RFH+FKD
Sbjct: 643 HSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKD 702
Query: 636 GLCSCGDYW 644
G CSC DYW
Sbjct: 703 GHCSCKDYW 711
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 192/446 (43%), Gaps = 77/446 (17%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
V SWN+++A EAL F M P R+T
Sbjct: 54 TVSSWNAMVAAYFEARQPREALLLFEKM------PQRNTVSW------------------ 89
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+ LI + K G LS+AR++FD +P RN+VSWTSM+ GYV+N +
Sbjct: 90 ---------------NGLISGHIKNGMLSEARRVFDTMPD--RNVVSWTSMVRGYVRNGD 132
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EA LF NV +V + +L G + A
Sbjct: 133 VAEAERLFWHM------------PHKNVVSWTVMLGGLLQ-------EGRVDDARKLFDM 173
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
V V N +I Y G +D +R +FD M +++ VTW ++++ YA+NG A +
Sbjct: 174 MPEKDVVAVTN-MIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKL 232
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F+ M + N V+ +A+LL H G +R + D + + V+V +I +
Sbjct: 233 FEVMPER-----NEVSWTAMLLGYTHSGRMREASSLFDAMPV----KPVVVCNEMIMGFG 283
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
G+VD AR+ F MKE++ +W+AMI Y EAL LF +M + G+ N+ + +S
Sbjct: 284 LNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLIS 343
Query: 397 VLSAC-SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
VLS C S A L + EF+ + V ++ + + G L A + +
Sbjct: 344 VLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVA--SVLITMYVKCGNLVRAKQVFNRFPL 401
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIA 481
K D V+W S++ H LGE A
Sbjct: 402 K-DVVMWNSMITGYSQH---GLGEEA 423
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/669 (36%), Positives = 383/669 (57%), Gaps = 69/669 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K + + ++ +W +I+ + G +A+ +S++ ++ P + K+C+A
Sbjct: 33 LFDK-IPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASG 91
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL K+ H A FGF++D+ + +ALIDM+ KC ++ AR +FD++ ++++VSWTSM
Sbjct: 92 DLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMV--VKDVVSWTSM 149
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
YV R+ +LLF+E L + + +S+ ++S+L AC+ G
Sbjct: 150 TYCYVNCGMCRQGILLFREMGL------------NGIRANSLTVSSILPACADYIKLG-- 195
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
HGF+++ + V V + L++ YA + +R VFD M +D V+WN ++ Y N
Sbjct: 196 REVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLN 255
Query: 268 GLAAEALDVFDQM----------------------------------VKSTDVKCNAVTL 293
L +F QM ++ + +K N +T+
Sbjct: 256 KEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITI 315
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
+ L +L LR GK IH V + E V + T+++ +Y KCG ++L+R FN M
Sbjct: 316 VSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPR 375
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
K+V +W MI MH + E+L LF KM+ +GV PN +TF+ VLS CSH+ L EG
Sbjct: 376 KDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLV 435
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
N+M E +I P +HY CMVD+L RAG+L+EAYD I M ++ WG+LLGACR++K
Sbjct: 436 FNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYK 495
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
NV+LG +AA +LFE+EP+N G +VLLSNI A +W + R +M+++ LAKTPG S V
Sbjct: 496 NVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWV 555
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
+++ KV++F+ GDK + Q + IY +L+E++ K++ GY + V+ +VDQE++E TL
Sbjct: 556 QVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCS 615
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSE+LA NLR+CGDCH I+LI+K+V +I+VRDS RFH+F+D
Sbjct: 616 HSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRD 675
Query: 636 GLCSCGDYW 644
G C+C D+W
Sbjct: 676 GYCTCNDFW 684
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 200/427 (46%), Gaps = 56/427 (13%)
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
S LI G+L A LFD+IP+ ++ +WT +++G+ Q+ ++A+ ++ L
Sbjct: 14 SIKLIKTCLNSGDLKRALYLFDKIPEP--DLRTWTILISGHTQHGFPKKAIDIYSTLL-- 69
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI 230
S NV D + SV AC+ V + H I+ GF+ ++ +GN LI
Sbjct: 70 ----------SRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALI 119
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
D + + V+ +R VFD M+ KD V+W S+ Y G+ + + +F +M ++ N+
Sbjct: 120 DMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREM-GLNGIRANS 178
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
+T+S++L A A ++LG+ +H +++ ++E +V V +++++MY + AR F+
Sbjct: 179 LTVSSILPACADY--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDS 236
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK-------------------------- 384
M +++ SW M+ Y ++ L LF++M K
Sbjct: 237 MYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELA 296
Query: 385 ---------AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
+G++PN IT VS L C++ ++ G + + IE V +V
Sbjct: 297 LGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIE-DVTITTALVL 355
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--LEPNNC 493
L + G L+ + + M K D V W +++ A +H I K+ + +EPN+
Sbjct: 356 LYAKCGDLELSRHVFNTMPRK-DVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSV 414
Query: 494 GYHVLLS 500
+ +LS
Sbjct: 415 TFIGVLS 421
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/670 (36%), Positives = 369/670 (55%), Gaps = 42/670 (6%)
Query: 2 KLSKSSSVSSVVSNVDKHSTN-TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
+L VS+ + N+ K + ++ +F K NV SW+ + A G+ EALR
Sbjct: 175 RLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRH 234
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F M L + T+S + +CS+ + G+ H + GF ++ V++A++ MY +
Sbjct: 235 FRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGR 294
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG + +ARK+FD + + +R++VSW ML+ YV ND ++A+ L++ L
Sbjct: 295 CGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLR---------- 344
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
D V S+LSACS G+ H ++ + V VGN L+ YA+ G
Sbjct: 345 -----ADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHT 399
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK------STDVKCNAVTLS 294
+R VFD M ++ ++W +II+ Y + L AEA +F QM++ S VK +A+
Sbjct: 400 EARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFV 459
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM-KE 353
+L A A + L GK + +Q L VGT+++++Y KCG+++ R+ F+ +
Sbjct: 460 TILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSR 519
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
+V+ W AMIA Y ++ EAL LF++M GVRP+ +FVS+L ACSH GL +G +
Sbjct: 520 PDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSY 579
Query: 414 LNTMGHEF-NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+M E+ N+ ++H+GC+ DLLGR G+LKEA + +E + VK D V W SLL ACR H
Sbjct: 580 FTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNH 639
Query: 473 KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSL 532
+++ + A KL LEP +V LSNIYA +W V + R M + + K G S
Sbjct: 640 RDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVST 699
Query: 533 VELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLR 592
+E+ +H F GD HP++ +I E L +L+ +++E GYV D V+H VD++EKE L
Sbjct: 700 IEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLF 759
Query: 593 IHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFK 634
HSE+LA NLRVC DCHT +LISK+ R+IVVRD RFH FK
Sbjct: 760 SHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFK 819
Query: 635 DGLCSCGDYW 644
DG CSC DYW
Sbjct: 820 DGKCSCQDYW 829
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 236/444 (53%), Gaps = 27/444 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+++ N++SW ++A A G S E LRA MR+ + P TF A+ SC L G
Sbjct: 105 LEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDG 164
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ HQ D VS+AL++MY KCG LS A+++F ++ +R RN++SW+ M +
Sbjct: 165 IRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM-ERTRNVISWSIMAGAHA 223
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ N EAL F+ LL + A+ ++LSACS + H
Sbjct: 224 LHGNVWEALRHFRFMLLL------------GIKATKSAMVTILSACSSPALVQDGRLIHS 271
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE--KDAVTWNSIIAIYAQNGLA 270
+ GF+SE+ V N ++ Y R G V+ +RKVFD M E +D V+WN +++ Y N
Sbjct: 272 CIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRG 331
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+A+ ++ +M ++ + VT ++L A + + LG+ +H Q++ +LE++VIVG +
Sbjct: 332 KDAIQLYQRM----QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNA 387
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI---KAG- 386
++ MY KCG AR F++M+++++ SWT +I+ Y EA LF +M+ K G
Sbjct: 388 LVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGS 447
Query: 387 ---VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
V+P+ + FV++L+AC+ +++G ++ + +V+L G+ G++
Sbjct: 448 SQRVKPDALAFVTILNACADVSALEQG-KMVSEQAASCGLSSDKAVGTAVVNLYGKCGEI 506
Query: 444 KEAYDLIEGMKVKADFVVWGSLLG 467
+E + +G+ + D +W +++
Sbjct: 507 EEGRRIFDGVCSRPDVQLWNAMIA 530
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 204/440 (46%), Gaps = 28/440 (6%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF-HRDVFVSSALIDMYSKCG 122
+ K ++ +T+ ++ C+ L G++ H A ++ + + ++ MY+ C
Sbjct: 34 LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCD 93
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
DA+ FD + Q RN+ SWT ++ + + ++E L + D
Sbjct: 94 SPGDAKAAFDALEQ--RNLYSWTGLVAAFAISGQSKETLRALERM------------RQD 139
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
V D+V + L +C + +G H V+ + + V N L++ Y + G +
Sbjct: 140 GVRPDAVTFITALGSCG--DPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLS 197
Query: 241 VSRKVFDGMIE-KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+++VF M ++ ++W+ + +A +G EAL F M+ +K + +L A
Sbjct: 198 HAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLL-LGIKATKSAMVTILSA 256
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE--KNVR 357
+ +++ G+ IH + E ++V +++ MY +CG V+ ARK F+ M E ++V
Sbjct: 257 CSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVV 316
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SW M++ Y + R ++A+ L+ +M +R + +T+VS+LSACS A V G L+
Sbjct: 317 SWNIMLSAYVHNDRGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLG-RVLHKQ 372
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
+E V +V + + G EA + + M+ ++ + W +++ A + V
Sbjct: 373 IVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRS-IISWTTIISAYVRRRLVAE 431
Query: 478 GEIAAKKLFELEPNNCGYHV 497
+++ ELE N V
Sbjct: 432 ACHLFQQMLELEKNGSSQRV 451
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 167/378 (44%), Gaps = 40/378 (10%)
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF-DSEVGVGNTLIDAYARGGHVDVS 242
V ++ A +L C+R H +K + +GN ++ YA +
Sbjct: 39 VRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDA 98
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
+ FD + +++ +W ++A +A +G + E L ++M + V+ +AVT L +
Sbjct: 99 KAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERM-RQDGVRPDAVTFITALGSCGD 157
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM-KEKNVRSWTA 361
LR G IH V+ LE V ++++MY KCG + A++ F +M + +NV SW+
Sbjct: 158 PESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSI 217
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
M + +H EAL F M+ G++ V++LSACS LVQ+G +++
Sbjct: 218 MAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG-RLIHSCIALS 276
Query: 422 NIEPGVEHYGCMVDLLGRAGKL---------------------------------KEAYD 448
E + ++ + GR G + K+A
Sbjct: 277 GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQ 336
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF--ELEPNNCGYHVLLSNIYANA 506
L + M+++AD V + SLL AC ++V LG + K++ ELE N + L+S +YA
Sbjct: 337 LYQRMQLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVS-MYAKC 395
Query: 507 GRWEDVERTRSLMKNRRL 524
G + M+ R +
Sbjct: 396 GSHTEARAVFDKMEQRSI 413
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 110/213 (51%), Gaps = 11/213 (5%)
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL-EES 324
++ +A+ LD+ Q V++ + T + +L A L G+ IH +K +L +
Sbjct: 24 RSDIASAVLDLEKQAVRAENA-----TYARLLQRCARAQALPEGRKIHSLAVKHNLLPGN 78
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+I+G I+ MY C A+ AF+ ++++N+ SWT ++A + + +++E L +M +
Sbjct: 79 LILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQ 138
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
GVRP+ +TF++ L +C +++G H + + I+P V + ++++ + G
Sbjct: 139 DGVRPDAVTFITALGSCGDPESLRDGIRIHQM-VVDSRLEIDPKVSN--ALLNMYKKCGS 195
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
L A + M+ + + W + GA +H NV
Sbjct: 196 LSHAKRVFAKMERTRNVISWSIMAGAHALHGNV 228
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/666 (38%), Positives = 377/666 (56%), Gaps = 38/666 (5%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLT---TLFNKYVDKNNVFSWNSVIADLARGGDSVEA 57
+KL S V S VD +S LT LF+K KN V SWN++I L G EA
Sbjct: 161 VKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAV-SWNTMIGGLCTKGYIFEA 219
Query: 58 LRAFSSMR-KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
F M+ + + T + +C + L S K+ H + GF D V++ +
Sbjct: 220 FNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVA 279
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
Y+KCG L A ++F + + N SW +++ G QN + R+AL L+ +
Sbjct: 280 AYAKCGMLICAERVFYSMETKTVN--SWNALIGGCAQNGDPRKALNLYIQM--------- 328
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
+ D I S+L A + + + HGFV++ G + + +G +L+ Y
Sbjct: 329 ---TYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHC 385
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G +R +FDGM EK +V+WN++I+ Y+QNGL +AL +F ++V S + + + + +V
Sbjct: 386 GESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLV-SDGFQPSDIAVVSV 444
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A + LRLGK H +K L E V V S IDMY K G + +R F+ +K K++
Sbjct: 445 LGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDL 504
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW A+IA YG+H E+++LF +M K G P+ TF+ +L+ CSHAGLV+EG + N
Sbjct: 505 ASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNE 564
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M + IEP +EHY C++D+LGRAG+L +A L+ M + D VW SLL CR ++
Sbjct: 565 MQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELE 624
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
+G+I A+KL ELEP N +V LSN+YA +GRW+DV R R ++K+ L K G S +EL
Sbjct: 625 IGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELG 684
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
GKVH+F+ GD PQ +++ +L K+ ++GY + ++V+HDVD+E+K LR HSE
Sbjct: 685 GKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSE 744
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLR+C DCH + +S+V REI++RD+KRFH+FKDGLC
Sbjct: 745 KLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLC 804
Query: 639 SCGDYW 644
SCGDYW
Sbjct: 805 SCGDYW 810
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/447 (31%), Positives = 233/447 (52%), Gaps = 26/447 (5%)
Query: 32 YVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR--KLSLTPTRSTFPCAIKSCSALHDL 89
Y+ N+ SWNS+I+ + G S + M + L P +T + C+ D+
Sbjct: 91 YMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDV 150
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
G + H A G DV V+++L+DMYSKCG L++A+ LFD+ +N VSW +M+
Sbjct: 151 QMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDK--NNRKNAVSWNTMIG 208
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
G EA LF+E ++E ++ V+ V + ++L AC ++ +
Sbjct: 209 GLCTKGYIFEAFNLFREMQMQE-----------DIEVNEVTVLNILPACLEISQLRSLKE 257
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG+ I+ GF + V N + AYA+ G + + +VF M K +WN++I AQNG
Sbjct: 258 LHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGD 317
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
+AL+++ QM S V + T+ ++LLA AHL LR GK +H V++ LE +G
Sbjct: 318 PRKALNLYIQMTYSGLVP-DWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGI 376
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
S++ +Y CG+ AR F+ M+EK+ SW AMI+GY + +AL LF K++ G +P
Sbjct: 377 SLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQP 436
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH---YGC-MVDLLGRAGKLKE 445
+ I VSVL ACS ++ L H + ++ + C +D+ ++G +KE
Sbjct: 437 SDIAVVSVLGACSQQSALR-----LGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKE 491
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIH 472
+ + +G+K K D W +++ A +H
Sbjct: 492 SRSVFDGLKNK-DLASWNAIIAAYGVH 517
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 198/396 (50%), Gaps = 22/396 (5%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
TFPC IK+C+ D G+ H G DVFV +ALI MY K G + A K+F +
Sbjct: 33 TFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYM 92
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
P +RN+VSW S+++G+ +N +++ + E + E + + D + +V
Sbjct: 93 P--VRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGE----------EGLLPDIATLVTV 140
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
L C+R + HG +K G +V V N+L+D Y++ G++ ++ +FD K+A
Sbjct: 141 LPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNA 200
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
V+WN++I G EA ++F +M D++ N VT+ +L A + LR K +H
Sbjct: 201 VSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHG 260
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
I+ + +V + Y KCG + A + F M+ K V SW A+I G + R+
Sbjct: 261 YSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRK 320
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG--- 431
AL+L+ +M +G+ P++ T S+L A +H ++ G H F + G+E
Sbjct: 321 ALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEV-----HGFVLRHGLEIDSFIG 375
Query: 432 -CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
++ L G+ A L +GM+ K+ V W +++
Sbjct: 376 ISLLSLYIHCGESSSARLLFDGMEEKSS-VSWNAMI 410
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 12/289 (4%)
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D+ V+ AC+ G+ E HG VIK G +V VGN LI Y + G VD + KVF
Sbjct: 30 DNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVF 89
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD-VKCNAVTLSAVLLAIAHLGV 305
M ++ V+WNSII+ +++NG + + D+ +M+ + + + TL VL A
Sbjct: 90 HYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVD 149
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
+++G IH +K+ L E V V S++DMY KCG + A+ F++ KN SW MI G
Sbjct: 150 VQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGG 209
Query: 366 YGMHCRAREALDLFYKM-IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
EA +LF +M ++ + N +T +++L AC ++ L + H ++I
Sbjct: 210 LCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRS----LKEL-HGYSIR 264
Query: 425 PGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G ++ V + G L A + M+ K W +L+G C
Sbjct: 265 HGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKT-VNSWNALIGGC 312
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 257/669 (38%), Positives = 386/669 (57%), Gaps = 45/669 (6%)
Query: 3 LSKSSSVSSVVSN--VDKHSTNTNLTTLFNKY--VDKNNVFSWNSVIADLARGGDSVEAL 58
LS +++ S+ ++N + +S +L + + + + N SW ++++ L++ +AL
Sbjct: 48 LSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADAL 107
Query: 59 RAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMY 118
AF++MR+ + PTR A ++ +AL G Q H GF ++FV+S L DMY
Sbjct: 108 AAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMY 167
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
SKCG LS+A ++FD++PQ+ + V+WT+M+ GY +N + A+L F++ E
Sbjct: 168 SKCGLLSEACRVFDQMPQK--DAVAWTAMIDGYAKNGSLEAAVLSFRDMKRE-------- 217
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
V D SVLSA + +++ H V K GF+ EV V N LID YA+
Sbjct: 218 ---GLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMD 274
Query: 239 VDVSRKVFDGMIEKDAVTWN-----SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
V+ + +V ++ D WN S+I Y + EAL ++ ++ + V+ N T
Sbjct: 275 VESASRV----LKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL-RRQGVEPNEFTF 329
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
S+++ A +L G +H QVIK DL VG++++DMY KCG + L+ + FN+++
Sbjct: 330 SSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEY 389
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
+ +W A+I + H REA+ F +MI +G+RPN+I FVS+L+ACSHAGLV EG +
Sbjct: 390 RTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKY 449
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
+M IEP EHY C++D GRAG+L EAY I M +K + W SLLGACR+
Sbjct: 450 FYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRG 509
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
+ +LGE+AA+ L +LEP N G HV LS IYA+ G+WEDV+ R LM++ R+ K PGFS V
Sbjct: 510 SKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWV 569
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
+ K H F D HPQ + IYE LEEL +++E GY+ D + + +++ KE LR
Sbjct: 570 DSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRY 629
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSE++A NLR+C DCHT + I KV R+I+VRD+ RFH+F +
Sbjct: 630 HSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVN 689
Query: 636 GLCSCGDYW 644
G CSCGDYW
Sbjct: 690 GRCSCGDYW 698
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 350/597 (58%), Gaps = 42/597 (7%)
Query: 71 PTRSTFPCAIKSCSAL-HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P+ T P A+KS S L H L +G+Q H ++ H + V ++L+ +Y+KCG L A++
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FDE+P + V WT+++T Y+ + REA+ + + ++ + DS
Sbjct: 583 VFDEMPHP--STVPWTALITAYMDAGDLREAVHVARNAF------------ANGMRPDSF 628
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
VL+AC+R+ E + G V V +D Y + G + +R+VFD M
Sbjct: 629 TAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM 688
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
KDAV W +++ YA NG EALD+F M ++ +K + ++ L A LG L LG
Sbjct: 689 RHKDAVAWGAMVGGYASNGHPREALDLFLAM-QAEGMKPDCYAVAGALSACTRLGALDLG 747
Query: 310 KCIHDQVIKM----DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
+ Q I+M + ++ ++GT++IDMY KCG A F QM++K++ W AMI G
Sbjct: 748 R----QAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILG 803
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
GM + A L +M K+GV+ N TF+ +L +C+H GL+Q+G + + M ++I P
Sbjct: 804 LGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 863
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
+EHYGCMVDLL RAG L+EA+ L++ M + A+ V+ G+LLG C+IH+N +L E K+L
Sbjct: 864 RIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQL 923
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
LEP N G +V+LSNIY+N GRWED + R MK + + K P S VE GKVH F VG
Sbjct: 924 ILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVG 983
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
DK HP ++IY+ L+EL ++++ +GY V+ DV+ EEKE TL HSEKLA
Sbjct: 984 DKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLL 1043
Query: 600 ------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT I+L+S++ REI+VRD+ RFH F+DG CSC DYW
Sbjct: 1044 ITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 159/337 (47%), Gaps = 27/337 (8%)
Query: 40 SWNSVIADLARGGDSVEALR----AFSS-MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
W ++I GD EA+ AF++ MR S T R + +C+ + DL +G+
Sbjct: 594 PWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVR-----VLTACARIADLATGET 648
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
+ A G + VFV++A +D+Y KCGE++ AR++FD++ R ++ V+W +M+ GY N
Sbjct: 649 VWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM--RHKDAVAWGAMVGGYASN 706
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+ REAL LF + ++ + D A+A LSAC+R+ + A V
Sbjct: 707 GHPREALDLF------------LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMV 754
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
F +G LID YA+ G + VF M +KD + WN++I G A
Sbjct: 755 DWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAF 814
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIID 333
+ QM KS VK N T +L + H G+++ G + H+ + + ++D
Sbjct: 815 ALVGQMEKS-GVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVD 873
Query: 334 MYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+ + G + A + + M N A++ G +H
Sbjct: 874 LLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIH 910
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K K+ V +W +++ A G EAL F +M+ + P A+ +C+ L
Sbjct: 684 VFDKMRHKDAV-AWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLG 742
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+QA + F + + +ALIDMY+KCG +A +F ++ R ++I+ W +M
Sbjct: 743 ALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQM--RKKDIIVWNAM 800
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
+ G + + A L + E G N DN F+
Sbjct: 801 ILGLGMTGHEKIAFALVGQM-----EKSGVKLN-DNTFI 833
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 2/152 (1%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K ++ WN++I L G A M K + +TF + SC+ + G++
Sbjct: 791 KKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR 850
Query: 95 A-HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H ++ + ++D+ S+ G L +A +L D++P N V ++L G
Sbjct: 851 YFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPA-NAVILGALLGGCKI 909
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVF 185
+ N A + K+ +L E G N++
Sbjct: 910 HRNTELAEHVLKQLILLEPWNSGNYVMLSNIY 941
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/665 (36%), Positives = 367/665 (55%), Gaps = 80/665 (12%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDK---NNVFSWNSVIADLARGGDSVEALRA 60
+ S++ SSV+ + + + N L + D+ +V WN +I A G A+
Sbjct: 37 NTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDL 96
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
+ SM L + P + T+P +K+CS L + G + H A +FG DVFV +AL+D Y+K
Sbjct: 97 YHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAK 156
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTG---YVQNDNAREALLLFKEFLLEESECGGA 177
CG L +A++LF + R ++V+W +M+ G Y D+A + ++ +E
Sbjct: 157 CGILVEAQRLFSSMSHR--DVVAWNAMIAGCSLYGLCDDAVQLIMQMQE----------- 203
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
+ + +S I VL C + YAR
Sbjct: 204 ----EGICPNSSTIVGVLPTCQCLL------------------------------YAR-- 227
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
K+FD M ++ V+W+++I Y + EALD+F +M++ + + + T+ VL
Sbjct: 228 ------KIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIF-RMMQLSGIDPDLTTMLGVL 280
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A +HL L+ G C H +I ++ ++IDMY KCG++ AR+ FN+M ++
Sbjct: 281 PACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIV 340
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SW AMI GYG+H EAL LF+ ++ G++P+ ITF+ +LS+CSH+GLV EG W + M
Sbjct: 341 SWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAM 400
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
+F+I P +EH CMVD+LGRAG + EA+ I M + D +W +LL ACRIHKN++L
Sbjct: 401 SRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIEL 460
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG 537
GE +KK+ L P + G VLLSNIY+ AGRW+D R K+ L K PG S +E+ G
Sbjct: 461 GEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEING 520
Query: 538 KVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
VHAF+ GD+ H Q +I LEEL V+++ +GY + + V DV++EEKE L HSEK
Sbjct: 521 IVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEK 580
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA NLRVCGDCHT I+ ++ + REI VRD+ RFH+FK+G C+
Sbjct: 581 LAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCN 640
Query: 640 CGDYW 644
CGD+W
Sbjct: 641 CGDFW 645
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 189/434 (43%), Gaps = 77/434 (17%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+++C L K+ HQ + D V L +Y C ++ AR+LFDEIP
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN--P 72
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+++ W ++ Y N A+ L+ L V + VL ACS
Sbjct: 73 SVILWNQIIRAYAWNGPFDGAIDLYHSML------------HLGVRPNKYTYPFVLKACS 120
Query: 200 RVTV--NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
+ +GV +H + G +S+V V L+D YA+ G + ++++F M +D V W
Sbjct: 121 GLLAIEDGVEIHSHAKMF--GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAW 178
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N++IA + GL +A+ + QM + + N+ T+ +GVL +C+
Sbjct: 179 NAMIAGCSLYGLCDDAVQLIMQM-QEEGICPNSSTI---------VGVLPTCQCL----- 223
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+Y ARK F+ M +N SW+AMI GY +EALD
Sbjct: 224 ----------------LY--------ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALD 259
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCM 433
+F M +G+ P+ T + VL ACSH +Q G+ H + I G +
Sbjct: 260 IFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF-----CSHGYLIVRGFATDTLICNAL 314
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------ 487
+D+ + GK+ A ++ M + D V W +++ IH LG + A LF
Sbjct: 315 IDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIH---GLG-MEALGLFHDLLALG 369
Query: 488 LEPNNCGYHVLLSN 501
L+P++ + LLS+
Sbjct: 370 LKPDDITFICLLSS 383
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 1/208 (0%)
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+L AC + + H +K +++ V + L Y V ++R++FD +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
+ WN II YA NG A+D++ M+ V+ N T VL A + L + G IH
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLH-LGVRPNKYTYPFVLKACSGLLAIEDGVEIH 132
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
LE V V T+++D Y KCG + A++ F+ M ++V +W AMIAG ++
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCD 192
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSAC 401
+A+ L +M + G+ PN T V VL C
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTC 220
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/633 (37%), Positives = 374/633 (59%), Gaps = 37/633 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ ++ ++ SWN+++A L +EAL+ F R ++ST+ IK C+ L L
Sbjct: 260 RQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLA 319
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+Q H GFH D V +A++D YSKCGEL DA +F +P +N+VSWT+M+ G
Sbjct: 320 LARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGS-QNVVSWTAMIGG 378
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
+QN + A LF DNV + ++VL+A + + +
Sbjct: 379 CIQNADIPLAAALFSRM------------REDNVKPNEFTYSTVLTASIPILLPQI---- 422
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +IK + VG L+ +Y++ G+ + + +F + KD V W+++++ Y+Q G
Sbjct: 423 HAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDC 482
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV-LRLGKCIHDQVIKMDLEESVIVGT 329
A +VF +M +K N T+S+ + A A + G+ H IK ++++ VG+
Sbjct: 483 DGATNVFIKM-SMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGS 541
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+++ MY + G +D AR F + ++++ SW +MI+GY H ++EALD F +M G+
Sbjct: 542 ALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEM 601
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ TF++V+ C+HAGLV+EG + ++M + NI P +EHY CMVDL RAGKL E +L
Sbjct: 602 DGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNL 661
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
IEGM A +VW +LLGACR+HKNV+LG++AA+KL LEP++ +VLLSNIYA AGRW
Sbjct: 662 IEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRW 721
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
++ + R LM ++++ K G S ++++ KVH+F+ DK HP E+IY L+ + +L++
Sbjct: 722 KERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQE 781
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GY + + V+HD+ +E+KE L +HSE+LA NLRVCGDCH V+
Sbjct: 782 GYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKNLRVCGDCHMVM 841
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+++S + DREI++RD RFH+F G CSCGD+W
Sbjct: 842 KMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 208/435 (47%), Gaps = 21/435 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K NV +W S++ +G + + F MR + P TF + + ++ + G
Sbjct: 161 MPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLG 220
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ H Q+ FG VFV ++LI+MYSKCG + +A+ +F ++ R++VSW +++ G +
Sbjct: 221 RRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQM--ETRDMVSWNTLMAGLL 278
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N++ EAL LF + + + ++V+ C+ + + H
Sbjct: 279 LNEHQLEALQLFHD------------SRASMAKLSQSTYSTVIKLCANLKQLALARQLHS 326
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQNGLAA 271
V+K GF S+ V ++DAY++ G +D + +F M ++ V+W ++I QN
Sbjct: 327 CVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIP 386
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
A +F +M + +VK N T S VL A + L IH Q+IK + + + VGT++
Sbjct: 387 LAAALFSRM-REDNVKPNEFTYSTVLTA----SIPILLPQIHAQIIKTNYQHAPSVGTAL 441
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ Y K G + A F + K+V +W+AM++ Y A ++F KM G++PN
Sbjct: 442 LASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNE 501
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
T S + AC+ + + + ++ + + +V + R G + A + E
Sbjct: 502 FTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFE 561
Query: 452 GMKVKADFVVWGSLL 466
+ D V W S++
Sbjct: 562 -RQTDRDLVSWNSMI 575
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 193/389 (49%), Gaps = 23/389 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHR-DVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
+K C + D SG+Q H GF R +V V +AL+DMY KCG + D R +F+ +P+
Sbjct: 106 LKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPK-- 163
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
RN+V+WTS+LTGYVQ + + LF ++ V+ + SVLSA
Sbjct: 164 RNVVTWTSLLTGYVQGRACSDVMALFFRM------------RAEGVWPNPFTFTSVLSAV 211
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ + H +K G S V V N+LI+ Y++ G V+ ++ VF M +D V+WN
Sbjct: 212 ASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWN 271
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
+++A N EAL +F +++ K + T S V+ A+L L L + +H V+K
Sbjct: 272 TLMAGLLLNEHQLEALQLFHD-SRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLK 330
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALD 377
V T+I+D Y KCG++D A F M +NV SWTAMI G + A
Sbjct: 331 HGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAA 390
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
LF +M + V+PN T+ +VL+A L Q + T + P V ++
Sbjct: 391 LFSRMREDNVKPNEFTYSTVLTASIPILLPQIHAQIIKT---NYQHAPSVG--TALLASY 445
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ G +EA + + + K D V W ++L
Sbjct: 446 SKLGNTEEALSIFKMIDHK-DVVAWSAML 473
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 210/437 (48%), Gaps = 49/437 (11%)
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA---RKLFDEIPQRIRN 140
S+L L GK A A +FG + + ++ + C + +A R+ D +P R
Sbjct: 5 SSLPVLLRGKHA---AAVFGSLKPLSALASAARLEDDCADTCNAPGARQALDGMPSRDAA 61
Query: 141 IVSWTS--MLTGYVQNDNAR-EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
S ++ + Y + R EAL + ++ CG V A++ VL
Sbjct: 62 AGSSSNPVAIVDYGRRGKGRGEAL----DHFVDVHRCGR---------VQGAAVSRVLKV 108
Query: 198 CSRVTVNGVTEGAHGFVIKRGFD-SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
C + E H +K GFD +EVGVG L+D Y + G V+ R VF+GM +++ VT
Sbjct: 109 CGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVT 168
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
W S++ Y Q ++ + +F +M ++ V N T ++VL A+A G + LG+ +H Q
Sbjct: 169 WTSLLTGYVQGRACSDVMALFFRM-RAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQS 227
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
+K +V V S+I+MY KCG V+ A+ F QM+ +++ SW ++AG ++ EAL
Sbjct: 228 VKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEAL 287
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGWHWLNTMGHEFNIEP 425
LF+ + + + T+ +V+ C+ H+ +++ G+H + N+
Sbjct: 288 QLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFH------SDGNVMT 341
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
+ +D + G+L +A+++ M + V W +++G C + ++ L ++
Sbjct: 342 AI------MDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRM 395
Query: 486 FE--LEPNNCGYHVLLS 500
E ++PN Y +L+
Sbjct: 396 REDNVKPNEFTYSTVLT 412
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 115/245 (46%), Gaps = 21/245 (8%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
NT K +D +V +W+++++ ++ GD A F M + P T AI
Sbjct: 450 NTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAID 509
Query: 82 SC-SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
+C S + G+Q H + + + + V SAL+ MY++ G + AR +F+ Q R+
Sbjct: 510 ACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFER--QTDRD 567
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
+VSW SM++GY Q+ ++EAL F++ + + +D +V+ C+
Sbjct: 568 LVSWNSMISGYAQHGYSKEALDTFRQM------------ETVGIEMDGATFLAVIVGCTH 615
Query: 201 VTVNGVTEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVT 256
+ V EG F V+ + + ++D Y+R G +D + + +GM A+
Sbjct: 616 AGL--VKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMV 673
Query: 257 WNSII 261
W +++
Sbjct: 674 WRTLL 678
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/692 (35%), Positives = 384/692 (55%), Gaps = 62/692 (8%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M S S ++++S K + + +F+ +++ V SWNS+I+ G VEA++
Sbjct: 66 MPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGV-SWNSLISGYVCYGSVVEAVKT 124
Query: 61 FSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
++SM K L R TF + S+ + G+Q H Q FGF VFV S+L+DMY+
Sbjct: 125 YNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYA 184
Query: 120 KCGELSDARKLFDEIPQRI-----------------------------RNIVSWTSMLTG 150
K G +S A ++FDE+ +R R+ +SWT+M+TG
Sbjct: 185 KMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITG 244
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
+QN EA+ LF++ + + +D SVL+AC + +
Sbjct: 245 LIQNGLEAEAMDLFRDM------------RQEGMAMDQYTFGSVLTACGGLRALKEGKEI 292
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +I+ G++ V VG+ L+D Y + V + VF M K+ V+W +++ Y QNG +
Sbjct: 293 HTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFS 352
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA+ VF M ++ ++ + TL +V+ + A+L L G H Q + L + V +
Sbjct: 353 EEAVRVFCDMQRN-GIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNA 411
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+I +Y KCG ++ + + F++M ++ SWTA+++GY +A E +DLF +M+ G++P+
Sbjct: 412 LITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPD 471
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+TF++VLSACS AGLV+ G + +M + I P +HY CM+DL GRAG+L+EA + I
Sbjct: 472 AVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFI 531
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
M D + W +LL +CR++ N ++G+ AA+ L EL+P N ++LLS+IYA G+W
Sbjct: 532 NKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWS 591
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
+V + R M+ + K PGFS ++ + KV+ F D+ P ++IY LE+LN K+ E G
Sbjct: 592 NVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEG 651
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
YV D +SV+HDV+ EK L HSEKLA NLRVCGDCH +
Sbjct: 652 YVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATK 711
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
ISK+ REI+VRD+ RFH FKDG CSCGD+W
Sbjct: 712 YISKISQREILVRDAVRFHLFKDGTCSCGDFW 743
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 251/677 (37%), Positives = 373/677 (55%), Gaps = 53/677 (7%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTL----------------FNKYV-DKNNVFSWNSVI 45
L ++ + S + + H++ N+ TL FN Y NV +W ++I
Sbjct: 113 LKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLI 172
Query: 46 ADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFH 105
L+R +AL F+ MR + P TF + +C+ L G+Q H F
Sbjct: 173 NQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFL 232
Query: 106 RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
D FV++AL+DMY+KCG + A +FDE+P R N+VSW SM+ G+V+N A+ +F+
Sbjct: 233 NDPFVATALLDMYAKCGSMLLAENVFDEMPHR--NLVSWNSMIVGFVKNKLYGRAIGVFR 290
Query: 166 EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGV 225
E L ++ D V+I+SVLSAC+ + + HG ++KRG V V
Sbjct: 291 EVL--------------SLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYV 336
Query: 226 GNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD 285
N+L+D Y + G + + K+F G ++D VTWN +I + +A F M++
Sbjct: 337 KNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIRE-G 395
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
V+ + + S++ A A + L G IH V+K ++ + +S++ MY KCG + A
Sbjct: 396 VEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAY 455
Query: 346 KAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
+ F + KE NV WTAMI + H A EA+ LF +M+ GV P YITFVSVLSACSH G
Sbjct: 456 QVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTG 515
Query: 406 LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
+ +G+ + N+M + NI+PG+EHY CMVDLLGR G+L+EA IE M + D +VWG+L
Sbjct: 516 KIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGAL 575
Query: 466 LGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLA 525
LGAC H NV++G A++LF+LEP+N G ++LLSNIY G E+ + R LM +
Sbjct: 576 LGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVR 635
Query: 526 KTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQE 585
K G S ++++ + F D+ H + ++IY L++L ++ GYV + + V+
Sbjct: 636 KESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGS 695
Query: 586 EKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDS 627
E E +L HSEKLA NLR CGDCHTV++ S++ REI+VRD
Sbjct: 696 E-EQSLWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDI 754
Query: 628 KRFHYFKDGLCSCGDYW 644
RFH F +G CSC DYW
Sbjct: 755 NRFHRFTNGSCSCMDYW 771
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 193/413 (46%), Gaps = 31/413 (7%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+ + + L L Q H Q H + + L+ +Y+KCG + LF+ P
Sbjct: 104 LNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPST 163
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+V+WT+++ +++ +AL F + ++ + +++L AC+
Sbjct: 164 NVVTWTTLINQLSRSNKPFQALTFFNRM------------RTTGIYPNHFTFSAILPACA 211
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ + H + K F ++ V L+D YA+ G + ++ VFD M ++ V+WNS
Sbjct: 212 HAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNS 271
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+I + +N L A+ VF +++ + + V++S+VL A A L L GK +H ++K
Sbjct: 272 MIVGFVKNKLYGRAIGVFREVL---SLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKR 328
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE-ALDL 378
L V V S++DMYCKCG + A K F +++V +W MI G CR E A
Sbjct: 329 GLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMG-CFRCRNFEQACTY 387
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMV 434
F MI+ GV P+ ++ S+ A + + +G TM H ++ G +V
Sbjct: 388 FQAMIREGVEPDEASYSSLFHASASIAALTQG-----TMIHSHVLKTGHVKNSRISSSLV 442
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
+ G+ G + +AY + K + + V W +++ H + A KLFE
Sbjct: 443 TMYGKCGSMLDAYQVFRETK-EHNVVCWTAMITVFHQHGCAN----EAIKLFE 490
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 21/223 (9%)
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
G + ++ W + Y Q+G+ F Q D+K +L A L L+
Sbjct: 68 GPMSREVAFWLQLFTSY-QSGVPK-----FHQFSSVPDLK-------HLLNNAAKLKSLK 114
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK--NVRSWTAMIAG 365
IH Q++ + S+ +++ +Y KCG + FN NV +WT +I
Sbjct: 115 HATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQ 174
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE--FNI 423
+ +AL F +M G+ PN+ TF ++L AC+HA L+ EG ++ + H+ F
Sbjct: 175 LSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEG-QQIHALIHKHCFLN 233
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+P V ++D+ + G + A ++ + M + + V W S++
Sbjct: 234 DPFVA--TALLDMYAKCGSMLLAENVFDEMPHR-NLVSWNSMI 273
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 350/597 (58%), Gaps = 42/597 (7%)
Query: 71 PTRSTFPCAIKSCSAL-HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P+ T P A+KS S L H L +G+Q H ++ H + V ++L+ +Y+KCG L A++
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FDE+P + V WT+++T Y+ + REA+ + + ++ + DS
Sbjct: 607 VFDEMPHP--STVPWTALITAYMDAGDLREAVHVARNAF------------ANGMRPDSF 652
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
VL+AC+R+ E + G V V +D Y + G + +R+VFD M
Sbjct: 653 TAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM 712
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
KDAV W +++ YA NG EALD+F M ++ +K + ++ L A LG L LG
Sbjct: 713 RHKDAVAWGAMVGGYASNGHPREALDLFLAM-QAEGMKPDCYAVAGALSACTRLGALDLG 771
Query: 310 KCIHDQVIKM----DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
+ Q I+M + ++ ++GT++IDMY KCG A F QM++K++ W AMI G
Sbjct: 772 R----QAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILG 827
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
GM + A L +M K+GV+ N TF+ +L +C+H GL+Q+G + + M ++I P
Sbjct: 828 LGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 887
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
+EHYGCMVDLL RAG L+EA+ L++ M + A+ V+ G+LLG C+IH+N +L E K+L
Sbjct: 888 RIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQL 947
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
LEP N G +V+LSNIY+N GRWED + R MK + + K P S VE GKVH F VG
Sbjct: 948 ILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVG 1007
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
DK HP ++IY+ L+EL ++++ +GY V+ DV+ EEKE TL HSEKLA
Sbjct: 1008 DKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLL 1067
Query: 600 ------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT I+L+S++ REI+VRD+ RFH F+DG CSC DYW
Sbjct: 1068 ITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 159/337 (47%), Gaps = 27/337 (8%)
Query: 40 SWNSVIADLARGGDSVEALR----AFSS-MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
W ++I GD EA+ AF++ MR S T R + +C+ + DL +G+
Sbjct: 618 PWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVR-----VLTACARIADLATGET 672
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
+ A G + VFV++A +D+Y KCGE++ AR++FD++ R ++ V+W +M+ GY N
Sbjct: 673 VWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM--RHKDAVAWGAMVGGYASN 730
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+ REAL LF + ++ + D A+A LSAC+R+ + A V
Sbjct: 731 GHPREALDLF------------LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMV 778
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
F +G LID YA+ G + VF M +KD + WN++I G A
Sbjct: 779 DWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAF 838
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIID 333
+ QM KS VK N T +L + H G+++ G + H+ + + ++D
Sbjct: 839 ALVGQMEKS-GVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVD 897
Query: 334 MYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+ + G + A + + M N A++ G +H
Sbjct: 898 LLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIH 934
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K K+ V +W +++ A G EAL F +M+ + P A+ +C+ L
Sbjct: 708 VFDKMRHKDAV-AWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLG 766
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+QA + F + + +ALIDMY+KCG +A +F ++ R ++I+ W +M
Sbjct: 767 ALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQM--RKKDIIVWNAM 824
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
+ G + + A L + E G N DN F+
Sbjct: 825 ILGLGMTGHEKIAFALVGQM-----EKSGVKLN-DNTFI 857
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 2/152 (1%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K ++ WN++I L G A M K + +TF + SC+ + G++
Sbjct: 815 KKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRR 874
Query: 95 A-HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H ++ + ++D+ S+ G L +A +L D++P N V ++L G
Sbjct: 875 YFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPA-NAVILGALLGGCKI 933
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVF 185
+ N A + K+ +L E G N++
Sbjct: 934 HRNTELAEHVLKQLILLEPWNSGNYVMLSNIY 965
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/686 (34%), Positives = 370/686 (53%), Gaps = 74/686 (10%)
Query: 9 VSSVVSNVDKHSTNTNLTTL--FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK 66
+ + + NV T+ T + F +++N ++W+++IA L+ GG ++A A
Sbjct: 261 IGTAILNVYSRDTSVLDTAIKFFESMIERNE-YTWSTMIAALSHGG-RIDAAIAVYERDP 318
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
+ R+ + C + D + + + ++ ALI Y + G +++
Sbjct: 319 VKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWN-------ALITGYMQNGMVNE 371
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
A++LFD++P RN +SW M+ GY QN + EAL L +E + +
Sbjct: 372 AKELFDKMP--FRNTISWAGMIAGYAQNGRSEEALGLLQEL------------HRSGMLP 417
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
++ S+ ACS + H +K G N LI Y + +++ +R+VF
Sbjct: 418 SLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVF 477
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK------------------- 287
M+ KD V+WNS +A QN L EA + FD M+ DV
Sbjct: 478 SRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMG 537
Query: 288 -----------CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
N+ L+ +L LG ++G+ IH IK+ ++ +IV ++I MY
Sbjct: 538 AFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYF 597
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG D +R+ F+ M+E+++ +W +I GY H REA+ ++ M AGV PN +TFV
Sbjct: 598 KCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVG 656
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+L+ACSHAGLV EGW + +M ++ + P EHY CMVDLLGR G ++ A I M ++
Sbjct: 657 LLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIE 716
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
D V+W +LLGAC+IHKN ++G+ AA+KLF +EP+N G +V+LSNIY++ G W +V R
Sbjct: 717 PDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVR 776
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
+MK + + K PG S +++ K+H+F+ GDK+H Q E+I LEEL L+ GYV D
Sbjct: 777 KIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTE 836
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V+HD+D+E+KE +L HSEKLA NLR+CGDCHT I+ +S V
Sbjct: 837 FVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVT 896
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
R+I +RD RFH+F++G CSC D+W
Sbjct: 897 KRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 213/447 (47%), Gaps = 76/447 (17%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ +++N V +WN++I+ + GD A R F +M P+R
Sbjct: 118 VFDGMLERNTV-AWNAMISCYVQNGDITMARRLFDAM------PSR-------------- 156
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DV ++++ Y ++ DAR LF+++P+R N+VSWT M
Sbjct: 157 -------------------DVSSWNSMLTGYCHSLQMVDARNLFEKMPER--NLVSWTVM 195
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY + +N +A +F + + + + D AS LSA + V
Sbjct: 196 ISGYGRIENHGKAWDIFCKM------------HREGLLPDQSNFASALSAVKGLGNLDVL 243
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV-DVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
E +K GF+ +V +G +++ Y+R V D + K F+ MIE++ TW+++IA +
Sbjct: 244 ESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSH 303
Query: 267 NGLAAEALDVFDQ-MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
G A+ V+++ VKS + C +A++ +A G + + + +Q+ E V
Sbjct: 304 GGRIDAAIAVYERDPVKS--IACR----TALITGLAQCGRIDDARILFEQIP----EPIV 353
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+ ++I Y + G V+ A++ F++M +N SW MIAGY + R+ EAL L ++ ++
Sbjct: 354 VSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRS 413
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE--HYGC--MVDLLGRAG 441
G+ P+ + S+ ACS+ ++ G T H ++ G + + C ++ + G+
Sbjct: 414 GMLPSLSSLTSIFFACSNIVALETG-----TQVHSLAVKVGCQFNSFACNALITMYGKCR 468
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGA 468
++ A + M K D V W S L A
Sbjct: 469 NMEYARQVFSRMVTK-DIVSWNSFLAA 494
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 196/419 (46%), Gaps = 37/419 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF K ++N V SW +I+ R + +A F M + L P +S F A+ + L
Sbjct: 180 LFEKMPERNLV-SWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLG 238
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK-CGELSDARKLFDEIPQRIRNIVSWTS 146
+L + A GF RDV + +A++++YS+ L A K F+ + +R N +W++
Sbjct: 239 NLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIER--NEYTWST 296
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ A+ +++ ++ C A+ + L+ C R+ +
Sbjct: 297 MIAALSHGGRIDAAIAVYERDPVKSIAC-------------RTALITGLAQCGRIDDARI 343
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ ++ + V N LI Y + G V+ ++++FD M ++ ++W +IA YAQ
Sbjct: 344 -------LFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQ 396
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG + EAL + ++ +S + + +L+++ A +++ L G +H +K+ + +
Sbjct: 397 NGRSEEALGLLQELHRSGMLP-SLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSF 455
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
++I MY KC ++ AR+ F++M K++ SW + +A + EA + F M+
Sbjct: 456 ACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR- 514
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTM--GHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ +++ +++SA +HA E TM HE P + LLG G L
Sbjct: 515 ---DDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSP------ILTILLGVCGSL 564
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 117/298 (39%), Gaps = 101/298 (33%)
Query: 112 SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
SA I + G + +AR++FD +P+R +I++W SM++ Y
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRR--DIIAWNSMISAYCH------------------ 77
Query: 172 SECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG----VGN 227
NG+ + A +D+ G G
Sbjct: 78 --------------------------------NGMPDAARDL-----YDAISGGNMRTGA 100
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
L+ Y R G V +R+VFDGM+E++ V WN++I+ Y QNG A +FD M S DV
Sbjct: 101 ILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM-PSRDVS 159
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
S++ YC Q+ AR
Sbjct: 160 S---------------------------------------WNSMLTGYCHSLQMVDARNL 180
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
F +M E+N+ SWT MI+GYG +A D+F KM + G+ P+ F S LSA G
Sbjct: 181 FEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLG 238
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/585 (39%), Positives = 349/585 (59%), Gaps = 35/585 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+ C + + G++ H + V++ + LI +Y+KC L DAR++FDE+PQ+
Sbjct: 97 LNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQK-- 154
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+VSWT+M++ Y Q A EAL LF E L ++E + A++L++C
Sbjct: 155 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTE------------PNHFTFATILTSCY 202
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
H IKR ++S + VG++L+D YA+ G + + VF + E+D V +
Sbjct: 203 GSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTA 262
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
II+ YAQ GL EAL +F Q+ + + N+VT ++VL A++ L L GK +H V++
Sbjct: 263 IISGYAQMGLDEEALKLFRQL-QIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRS 321
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
V++ S+IDMY KCG V AR+ F+ M E+ SW AM+ GY H ARE L+LF
Sbjct: 322 GQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELF 381
Query: 380 YKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWH-WLNTMGHEFNIEPGVEHYGCMVDLL 437
M + V+P+ IT+++VLS CSH L G + N + + IEP + HYGC+VDLL
Sbjct: 382 KLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLL 441
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GRAG+++EA+D I+ M +WGSLLG+CR+H +V++G I +KL ELEP N G +V
Sbjct: 442 GRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYV 501
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
+LSN+YA+AG+WED+ R LM+ + + K PG S VEL VH F D HP+ E++ +
Sbjct: 502 ILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAK 561
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
++EL++K +E GYV D++ V++DVD+E+KE L HSEKLA
Sbjct: 562 KVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIK 621
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH+ + +S++ R +++RD RFH G+CSCGDYW
Sbjct: 622 NLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 143/280 (51%), Gaps = 15/280 (5%)
Query: 193 SVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
++L+ C V+ + EG H +IK + V + LI Y + + +R++FD M
Sbjct: 95 TILNEC--VSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMP 152
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+K+ V+W ++I+ Y+Q G A EAL++F +M++S D + N T + +L + G+
Sbjct: 153 QKNVVSWTAMISAYSQRGFAFEALNLFVEMLRS-DTEPNHFTFATILTSCYGSLGFETGR 211
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
IH IK + E + VG+S++DMY K G++ A F+ + E++V + TA+I+GY
Sbjct: 212 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMG 271
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
EAL LF ++ G+ N +T+ SVL+A S + G H + G Y
Sbjct: 272 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHG-----KQVHSHVLRSGQYSY 326
Query: 431 ----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
++D+ + G + A + + M + + W ++L
Sbjct: 327 VVLLNSLIDMYSKCGNVCYARRIFDSMPERT-CISWNAML 365
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/686 (34%), Positives = 370/686 (53%), Gaps = 74/686 (10%)
Query: 9 VSSVVSNVDKHSTNTNLTTL--FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK 66
+ + + NV T+ T + F +++N ++W+++IA L+ GG ++A A
Sbjct: 261 IGTAILNVYSRDTSVLDTAIKFFESMIERNE-YTWSTMIAALSHGG-RIDAAIAVYERDP 318
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
+ R+ + C + D + + + ++ ALI Y + G +++
Sbjct: 319 VKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWN-------ALITGYMQNGMVNE 371
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
A++LFD++P RN +SW M+ GY QN + EAL L +E + +
Sbjct: 372 AKELFDKMP--FRNTISWAGMIAGYAQNGRSEEALGLLQEL------------HRSGMLP 417
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
++ S+ ACS + H +K G N LI Y + +++ +R+VF
Sbjct: 418 SLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVF 477
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK------------------- 287
M+ KD V+WNS +A QN L EA + FD M+ DV
Sbjct: 478 SRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMG 537
Query: 288 -----------CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
N+ L+ +L LG ++G+ IH IK+ ++ +IV ++I MY
Sbjct: 538 AFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYF 597
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG D +R+ F+ M+E+++ +W +I GY H REA+ ++ M AGV PN +TFV
Sbjct: 598 KCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVG 656
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+L+ACSHAGLV EGW + +M ++ + P EHY CMVDLLGR G ++ A I M ++
Sbjct: 657 LLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIE 716
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
D V+W +LLGAC+IHKN ++G+ AA+KLF +EP+N G +V+LSNIY++ G W +V R
Sbjct: 717 PDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVR 776
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
+MK + + K PG S +++ K+H+F+ GDK+H Q E+I LEEL L+ GYV D
Sbjct: 777 KIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTE 836
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V+HD+D+E+KE +L HSEKLA NLR+CGDCHT I+ +S V
Sbjct: 837 FVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVT 896
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
R+I +RD RFH+F++G CSC D+W
Sbjct: 897 KRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 213/447 (47%), Gaps = 76/447 (17%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ +++N V +WN++I+ + GD A R F +M P+R
Sbjct: 118 VFDGMLERNTV-AWNAMISCYVQNGDITMARRLFDAM------PSR-------------- 156
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DV ++++ Y ++ DAR LF+++P+R N+VSWT M
Sbjct: 157 -------------------DVSSWNSMLTGYCHSLQMVDARNLFEKMPER--NLVSWTVM 195
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY + +N +A +F + + + + D AS LSA + V
Sbjct: 196 ISGYGRIENHGKAWDIFCKM------------HREGLLPDQSNFASALSAVKGLGNLDVL 243
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV-DVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
E +K GF+ +V +G +++ Y+R V D + K F+ MIE++ TW+++IA +
Sbjct: 244 ESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSH 303
Query: 267 NGLAAEALDVFDQ-MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
G A+ V+++ VKS + C +A++ +A G + + + +Q+ E V
Sbjct: 304 GGRIDAAIAVYERDPVKS--IACR----TALITGLAQCGRIDDARILFEQIP----EPIV 353
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+ ++I Y + G V+ A++ F++M +N SW MIAGY + R+ EAL L ++ ++
Sbjct: 354 VSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRS 413
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE--HYGC--MVDLLGRAG 441
G+ P+ + S+ ACS+ ++ G T H ++ G + + C ++ + G+
Sbjct: 414 GMLPSLSSLTSIFFACSNIVALETG-----TQVHSLAVKVGCQFNSFACNALITMYGKCR 468
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGA 468
++ A + M K D V W S L A
Sbjct: 469 NMEYARQVFSRMVTK-DIVSWNSFLAA 494
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 196/419 (46%), Gaps = 37/419 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF K ++N V SW +I+ R + +A F M + L P +S F A+ + L
Sbjct: 180 LFEKMPERNLV-SWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLG 238
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK-CGELSDARKLFDEIPQRIRNIVSWTS 146
+L + A GF RDV + +A++++YS+ L A K F+ + +R N +W++
Sbjct: 239 NLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIER--NEYTWST 296
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ A+ +++ ++ C A+ + L+ C R+ +
Sbjct: 297 MIAALSHGGRIDAAIAVYERDPVKSIAC-------------RTALITGLAQCGRIDDARI 343
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ ++ + V N LI Y + G V+ ++++FD M ++ ++W +IA YAQ
Sbjct: 344 -------LFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQ 396
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG + EAL + ++ +S + + +L+++ A +++ L G +H +K+ + +
Sbjct: 397 NGRSEEALGLLQELHRSGMLP-SLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSF 455
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
++I MY KC ++ AR+ F++M K++ SW + +A + EA + F M+
Sbjct: 456 ACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR- 514
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTM--GHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ +++ +++SA +HA E TM HE P + LLG G L
Sbjct: 515 ---DDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSP------ILTILLGVCGSL 564
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 117/298 (39%), Gaps = 101/298 (33%)
Query: 112 SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
SA I + G + +AR++FD +P+R +I++W SM++ Y
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRR--DIIAWNSMISAYCH------------------ 77
Query: 172 SECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG----VGN 227
NG+ + A +D+ G G
Sbjct: 78 --------------------------------NGMPDAARDL-----YDAISGGNMRTGA 100
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
L+ Y R G V +R+VFDGM+E++ V WN++I+ Y QNG A +FD M S DV
Sbjct: 101 ILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM-PSRDVS 159
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
S++ YC Q+ AR
Sbjct: 160 S---------------------------------------WNSMLTGYCHSLQMVDARNL 180
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
F +M E+N+ SWT MI+GYG +A D+F KM + G+ P+ F S LSA G
Sbjct: 181 FEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLG 238
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 253/661 (38%), Positives = 367/661 (55%), Gaps = 55/661 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
+V SWNS+I A+ G AL FS M + P T + C++L GKQ
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H A +++FV + L+DMY+KCG + +A +F + ++++VSW +M+ GY Q
Sbjct: 252 HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM--SVKDVVSWNAMVAGYSQIG 309
Query: 156 NAREALLLFKEFLLEE---------SECGGASEN--------------SDNVFVDSVAIA 192
+A+ LF++ E+ + G ++ S + + V +
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFD-------SEVGVGNTLIDAYARGGHVDVSRKV 245
SVLS C+ V + H + IK D E V N LID YA+ VD +R +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAM 429
Query: 246 FDGMI--EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS-TDVKCNAVTLSAVLLAIAH 302
FD + E+D VTW +I Y+Q+G A +AL++ +M + + NA T+S L+A A
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 303 LGVLRLGKCIHDQVIKMDLEE-SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
L LR+GK IH ++ + V +IDMY KCG + AR F+ M KN +WT+
Sbjct: 490 LAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTS 549
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
++ GYGMH EAL +F +M + G + + +T + VL ACSH+G++ +G + N M F
Sbjct: 550 LMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVF 609
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
+ PG EHY C+VDLLGRAG+L A LIE M ++ VVW + L CRIH V+LGE A
Sbjct: 610 GVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYA 669
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
A+K+ EL N+ G + LLSN+YANAGRW+DV R RSLM+++ + K PG S VE
Sbjct: 670 AEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTT 729
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
F VGDK HP ++IY+ L + +++++GYV + +HDVD EEK+ L HSEKLA
Sbjct: 730 FFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALA 789
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
NLRVCGDCHT +S+++D +I++RDS RFH+FK+G CSC Y
Sbjct: 790 YGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGY 849
Query: 644 W 644
W
Sbjct: 850 W 850
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 231/486 (47%), Gaps = 71/486 (14%)
Query: 38 VFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ 97
V+ WNS+I G + + L F M LS TP TFP K+C + + G+ AH
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 98 QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA 157
+ + GF +VFV +AL+ MYS+C LSDARK+FDE+ + ++VSW S++ Y +
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM--SVWDVVSWNSIIESYAKLGKP 209
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
+ AL +F N D++ + +VL C+ + + + + H F +
Sbjct: 210 KVALEMFSRM-----------TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA--------------- 262
+ VGN L+D YA+ G +D + VF M KD V+WN+++A
Sbjct: 259 EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 263 --------------------IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
YAQ GL EAL V QM+ S+ +K N VTL +VL A
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML-SSGIKPNEVTLISVLSGCAS 377
Query: 303 LGVLRLGKCIHDQVIKMDLE-------ESVIVGTSIIDMYCKCGQVDLARKAFNQM--KE 353
+G L GK IH IK ++ + +V +IDMY KC +VD AR F+ + KE
Sbjct: 378 VGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE 437
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIK--AGVRPNYITFVSVLSACSHAGLVQEGW 411
++V +WT MI GY H A +AL+L +M + RPN T L AC+ ++ G
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG- 496
Query: 412 HWLNTMGHEF---NIEPGVEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
H + N + V + C++D+ + G + +A + + M K + V W SL+
Sbjct: 497 ----KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE-VTWTSLM 551
Query: 467 GACRIH 472
+H
Sbjct: 552 TGYGMH 557
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 203/467 (43%), Gaps = 62/467 (13%)
Query: 66 KLSLTPTRST--FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
K+SL T + P I C + + K HQ+ FG + ++S LI Y G
Sbjct: 19 KVSLFSTSAPEITPPFIHKCKTISQV---KLIHQKLLSFGI-LTLNLTSHLISTYISVGC 74
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
LS A L P + W S++ Y N A + L LF +S +
Sbjct: 75 LSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM------------HSLS 122
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
D+ V AC ++ E AH + GF S V VGN L+ Y+R + +R
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
KVFD M D V+WNSII YA+ G AL++F +M + + +TL VL A L
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G LGK +H + ++ +++ VG ++DMY KCG +D A F+ M K+V SW AM+
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 364 AGYGMHCRAREALDLFYK-----------------------------------MIKAGVR 388
AGY R +A+ LF K M+ +G++
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG-------CMVDLLGRAG 441
PN +T +SVLS C+ G + G ++ ++ I+ +G ++D+ +
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKE-IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421
Query: 442 KLKEAYDLIEGMKVKA-DFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
K+ A + + + K D V W ++G H + + ++FE
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 171/352 (48%), Gaps = 35/352 (9%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K +V +W++ I+ A+ G EAL M + P T + C+++ L GK+
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 95 AHQQAFIF-------GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
H A + G + V + LIDMY+KC ++ AR +FD + + R++V+WT M
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY Q+ +A +AL L E E +C + N F S A L AC+ + +
Sbjct: 447 IGGYSQHGDANKALELLSEMF--EEDC----QTRPNAFTISCA----LVACASLAALRIG 496
Query: 208 EGAHGFVIKRGFDS-EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H + ++ ++ + V N LID YA+ G + +R VFD M+ K+ VTW S++ Y
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
+G EAL +FD+M + K + VTL VL A +H G++ DQ ++ +
Sbjct: 557 HGYGEEALGIFDEM-RRIGFKLDGVTLLVVLYACSHSGMI-------DQGMEYFNRMKTV 608
Query: 327 VGTS--------IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
G S ++D+ + G+++ A + +M E W A ++ +H
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIH 660
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 249/657 (37%), Positives = 372/657 (56%), Gaps = 35/657 (5%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
S ++ V+S+++ K + LF++ + + +V SWNS+I G S L F
Sbjct: 228 SNTAVVNSLIAAYFKFGGVESAHNLFDE-LSEPDVVSWNSMINGCVVNGFSGNGLEIFIQ 286
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M L + +T + +C+ + +L G+ H F +V S+ L+DMYSKCG
Sbjct: 287 MLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGN 346
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L+ A ++F ++ IVSWTS++ YV+ +A+ LF E S
Sbjct: 347 LNGATEVFVKMGDT--TIVSWTSIIAAYVREGLYSDAIGLFDEM------------QSKG 392
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V D + S++ AC+ + H +VIK G S + V N LI+ YA+ G V+ +R
Sbjct: 393 VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEAR 452
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VF + KD V+WN++I Y+QN L EAL++F M K K + +T++ VL A A L
Sbjct: 453 LVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK--QFKPDDITMACVLPACAGL 510
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L G+ IH +++ + V +++DMY KCG + LA+ F+ + +K++ SWT MI
Sbjct: 511 AALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMI 570
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
AGYGMH EA+ F +M AG+ P+ +F ++L+ACSH+GL+ EGW + N+M +E +
Sbjct: 571 AGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGV 630
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
EP +EHY C+VDLL R G L +AY IE M +K D +WG LL CRIH +V L E A+
Sbjct: 631 EPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAE 690
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
+FELEP+N Y+V+L+N+YA A +WE+V++ R M+ R + PG S +E+ GK + F+
Sbjct: 691 HIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFV 750
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
G+ +HPQ +KI L +L +++Q Y + V+ + D EKEM HSEK A
Sbjct: 751 AGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFG 810
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
N RVCGDCH + + +SK EIV+RDS RFH+FKDGLCSC D
Sbjct: 811 ILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/480 (30%), Positives = 247/480 (51%), Gaps = 31/480 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++ + VF WN ++++ A+ G+ E++ F M+KL + TF C +K +AL
Sbjct: 151 IFDKIMN-DKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALG 209
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ K+ H GF + V ++LI Y K G + A LFDE+ + ++VSW SM
Sbjct: 210 KVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE--PDVVSWNSM 267
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G V N + L +F + L+ E VD + SVL AC+ + +
Sbjct: 268 INGCVVNGFSGNGLEIFIQMLILGVE------------VDLTTLVSVLVACANIGNLSLG 315
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
HGF +K F EV NTL+D Y++ G+++ + +VF M + V+W SIIA Y +
Sbjct: 316 RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVRE 375
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL ++A+ +FD+M +S V+ + T+++++ A A L G+ +H VIK + ++ V
Sbjct: 376 GLYSDAIGLFDEM-QSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPV 434
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++I+MY KCG V+ AR F+++ K++ SW MI GY + EAL+LF M K
Sbjct: 435 TNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-F 493
Query: 388 RPNYITFVSVLSACSHAGLVQEG----WHWLNTMGHEFNIEPGVEHYGC-MVDLLGRAGK 442
+P+ IT VL AC+ + +G H L G+ ++ H C +VD+ + G
Sbjct: 494 KPDDITMACVLPACAGLAALDKGREIHGHILRR-GYFSDL-----HVACALVDMYAKCGL 547
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIH--KNVDLGEIAAKKLFELEPNNCGYHVLLS 500
L A L+ M K D + W ++ +H N + ++ +EP+ + +L+
Sbjct: 548 LVLA-QLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILN 606
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 212/432 (49%), Gaps = 29/432 (6%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N+ I GD A+ + + L +++ ++ C+ L GK+ H
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSKSYELG--LNSYCSVLQLCAEKKSLEDGKRVHSVIIS 122
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
G D + + L+ MY CG+L RK+FD+I + W +++ Y + N RE++
Sbjct: 123 NGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMN--DKVFLWNLLMSEYAKIGNFRESV 180
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
LFK+ +++ G V A+ V C RV HG+V+K GF S
Sbjct: 181 SLFKK--MQKLGVVGNCYTFTCVLKCFAALGKV-KECKRV---------HGYVLKLGFGS 228
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
V N+LI AY + G V+ + +FD + E D V+WNS+I NG + L++F QM+
Sbjct: 229 NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML 288
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
V+ + TL +VL+A A++G L LG+ +H +K E V+ +++DMY KCG +
Sbjct: 289 -ILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNL 347
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ A + F +M + + SWT++IA Y +A+ LF +M GVRP+ T S++ AC
Sbjct: 348 NGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHAC 407
Query: 402 SHAGLVQEG-----WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+ + + +G + N MG + ++++ + G ++EA + + VK
Sbjct: 408 ACSSSLDKGRDVHSYVIKNGMGSNLPVT------NALINMYAKCGSVEEARLVFSKIPVK 461
Query: 457 ADFVVWGSLLGA 468
D V W +++G
Sbjct: 462 -DIVSWNTMIGG 472
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+ + + KS + + +VL A L GK +H +I + +G ++ M
Sbjct: 79 NAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFM 138
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y CG + RK F+++ V W +++ Y RE++ LF KM K GV N TF
Sbjct: 139 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTF 198
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA----GKLKEAYDLI 450
VL + G V+E H + ++ G +V+ L A G ++ A++L
Sbjct: 199 TCVLKCFAALGKVKECKRV-----HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLF 253
Query: 451 EGMKVKADFVVWGSLLGACRIH 472
+ + + D V W S++ C ++
Sbjct: 254 DELS-EPDVVSWNSMINGCVVN 274
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/585 (40%), Positives = 347/585 (59%), Gaps = 35/585 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+ C + + G++ H + V++ + LI +Y+KC L DAR +FDE+PQR
Sbjct: 69 LNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQR-- 126
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+VSWT+M++ Y Q A EAL LF E L ++E + A++L++C
Sbjct: 127 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTE------------PNHFTFATILTSCY 174
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
H IKR ++S + VG++L+D YA+ G + + VF + E+D V +
Sbjct: 175 GSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTA 234
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
II+ YAQ GL EAL +F Q+ + + N+VT ++VL A++ L L GK +H V++
Sbjct: 235 IISGYAQMGLDEEALKLFRQL-QIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRS 293
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
V++ S+IDMY KCG V AR+ F+ M E+ SW AM+ GY H ARE L+LF
Sbjct: 294 GQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELF 353
Query: 380 YKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWH-WLNTMGHEFNIEPGVEHYGCMVDLL 437
M + V+P+ IT+++VLS CSH L G + N + + IEP + HYGC+VDLL
Sbjct: 354 KLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLL 413
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GRAG+++EA+D I+ M +WGSLLG+CR+H +V++G I +KL ELEP N G +V
Sbjct: 414 GRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYV 473
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
+LSN+YA+AG+WED+ R LM+ + + K PG S VEL VH F D HP+ E++
Sbjct: 474 ILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAN 533
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
++EL++K +E GYV D++ V++DVD+E+KE L HSEKLA
Sbjct: 534 KVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIK 593
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH+ + +S++ R +++RD RFH G+CSCGDYW
Sbjct: 594 NLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 189/370 (51%), Gaps = 31/370 (8%)
Query: 23 TNLTTLFNK------------YVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT 70
T L L+NK + + NV SW ++I+ ++ G + EAL F M +
Sbjct: 101 TRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTE 160
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P TF + SC +G+Q H A + +FV S+L+DMY+K G + DA +
Sbjct: 161 PNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGV 220
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F +P+ R++V+ T++++GY Q EAL LF++ +E G + N SV
Sbjct: 221 FHCLPE--RDVVACTAIISGYAQMGLDEEALKLFRQLQIE-----GMNSN-------SVT 266
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
ASVL+A S + + H V++ G S V + N+LID Y++ G+V +R++FD M
Sbjct: 267 YASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMP 326
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
E+ ++WN+++ Y+++G+A E L++F M + VK +++T AVL +H + +G
Sbjct: 327 ERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGL 386
Query: 311 CIHDQVI--KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
I ++ K +E + ++D+ + G+V+ +AF+ +K+ A+
Sbjct: 387 EIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVE---EAFDFIKKMPFVPTAAIWGSLLG 443
Query: 369 HCRAREALDL 378
CR +++
Sbjct: 444 SCRVHSDVEI 453
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 142/280 (50%), Gaps = 15/280 (5%)
Query: 193 SVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
S+L+ C V+ + EG H +IK + V + LI Y + + +R +FD M
Sbjct: 67 SILNEC--VSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMP 124
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+++ V+W ++I+ Y+Q G A EAL++F +M++S D + N T + +L + G+
Sbjct: 125 QRNVVSWTAMISAYSQRGFAFEALNLFVEMLRS-DTEPNHFTFATILTSCYGSLGFETGR 183
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
IH IK + E + VG+S++DMY K G++ A F+ + E++V + TA+I+GY
Sbjct: 184 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMG 243
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
EAL LF ++ G+ N +T+ SVL+A S + G H + G Y
Sbjct: 244 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHG-----KQVHSHVLRSGQYSY 298
Query: 431 ----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
++D+ + G + A + + M + + W ++L
Sbjct: 299 VVLLNSLIDMYSKCGNVCYARRIFDSMPERT-CISWNAML 337
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 258/700 (36%), Positives = 382/700 (54%), Gaps = 86/700 (12%)
Query: 28 LFNKY-VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+FN+ +D + +N++I + D A+ F +MR + P TF + + + +
Sbjct: 101 IFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLI 160
Query: 87 -HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE---------LSDARKLFDEIPQ 136
+D Q H FG V +AL+ +Y KC ++ ARKLFDE+P+
Sbjct: 161 FYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPK 220
Query: 137 RIRNIVSWTSMLTGYVQNDN---AREALLLFKE-------FLLEESECGGASENSDNVF- 185
R N WT+++TGYV+N + ARE L E ++ G E++ +F
Sbjct: 221 R--NEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFR 278
Query: 186 --------VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE----VGVGNTLIDAY 233
VD SV+SAC+ + + H +++K + + + VGNTLI Y
Sbjct: 279 KMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLY 338
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY----------------------------- 264
+ G VD +RK+F M KD +TWN++++ Y
Sbjct: 339 WKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMIS 398
Query: 265 --AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
AQNG +AL +F+QM K + N + + A + LG L G+ +H Q++ + +
Sbjct: 399 GLAQNGFGEQALKLFNQM-KLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHD 457
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
++ VG ++I MY +CG V+ AR F M + SW +MIA G H +A++L+ +M
Sbjct: 458 STLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQM 517
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
+K G+ P+ TF++VLSACSHAGLV+EG + N+M + I PG +HY M+DL RAGK
Sbjct: 518 LKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGK 577
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
+A ++I+ M +A +W +LL CR H N+DLG AA+KLF+L P + G +VLLSN+
Sbjct: 578 FSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNM 637
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
YA+ GRW DV RTR LM++R + K P S E+ KVH FLV D HP+ IY YLE+L
Sbjct: 638 YASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKL 697
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVC 604
N++++++GY+ D V+HD++ E KE L HSEKLA NLR+C
Sbjct: 698 NLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLRIC 757
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
GDCH I+ +SKVV REIVVRD KRFH+FK+G CSC +YW
Sbjct: 758 GDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 218/507 (42%), Gaps = 107/507 (21%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
DV + LI YS G L AR++F+E P +R+ V + +M+TGY ++ A+ LF+
Sbjct: 78 DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFR- 136
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA-HGFVIKRGFDSEVGV 225
+ N D ASVLSA + + + G HG V+K G + V
Sbjct: 137 -----------AMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAV 185
Query: 226 GN----------------------------------------TLIDAYARGGHVDVSRKV 245
N TLI Y R G + +R++
Sbjct: 186 LNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREI 245
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
D M E+ + WN++I+ Y +GL +AL +F +M + V+ + T ++V+ A A G
Sbjct: 246 LDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKM-RLLGVQVDESTYTSVISACADGGF 304
Query: 306 LRLGKCIHDQVIKMDLEES----VIVGTSIIDMYCKCGQVDLARKA-------------- 347
LGK +H ++K +L + VG ++I +Y K G+VD ARK
Sbjct: 305 FLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNT 364
Query: 348 -----------------FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
F QM EKN+ +WT MI+G + +AL LF +M G PN
Sbjct: 365 LLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPN 424
Query: 391 YITFVSVLSACSHAGLVQEGWHW---LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
F ++ACS G ++ G + +GH+ + G M+ + R G ++ A
Sbjct: 425 DYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVG----NAMITMYARCGIVEAAR 480
Query: 448 DLIEGMKVKADFVVWGSLLGACRIH----KNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
+ M D V W S++ A H K ++L E K+ + P+ + +LS
Sbjct: 481 TMFLTMPF-VDPVSWNSMIAALGQHGHGVKAIELYEQMLKE--GILPDRRTFLTVLSAC- 536
Query: 504 ANAGRWEDVERT-RSLMKNRRLAKTPG 529
++AG E+ R S+++N +A PG
Sbjct: 537 SHAGLVEEGNRYFNSMLENYGIA--PG 561
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 150/378 (39%), Gaps = 91/378 (24%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG VI GF + N LID Y + +RK+FD + + D + ++I Y+ G
Sbjct: 36 HGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSALGNL 95
Query: 271 AEALDVFDQM--------------------------------VKSTDVKCNAVTLSAVLL 298
A ++F++ ++ + + + T ++VL
Sbjct: 96 KMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLS 155
Query: 299 AIAHLGVLRLGKC--IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL---------ARKA 347
A + L +C +H V+K +E V +++ +Y KC L ARK
Sbjct: 156 A-STLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKL 214
Query: 348 FNQMKEKN-----------VR--------------------SWTAMIAGYGMHCRAREAL 376
F++M ++N VR +W AMI+GY H +AL
Sbjct: 215 FDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDAL 274
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG-----WHWLNTMGHEFNIEPGVEHYG 431
LF KM GV+ + T+ SV+SAC+ G G + N + + + V +
Sbjct: 275 TLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGN-- 332
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI-AAKKLFELEP 490
++ L + GK+ A + M VK D + W +LL V+ G + AK F P
Sbjct: 333 TLITLYWKYGKVDGARKIFYEMPVK-DIITWNTLLSGY-----VNAGRMEEAKSFFAQMP 386
Query: 491 --NNCGYHVLLSNIYANA 506
N + V++S + N
Sbjct: 387 EKNLLTWTVMISGLAQNG 404
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 251/662 (37%), Positives = 343/662 (51%), Gaps = 92/662 (13%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
+R +S P P A+KSC A + H A + G D FV+S+L+ Y + G
Sbjct: 11 LRHVSFPPDPHLLPSALKSCPAQP---LARALHAAAVVSGLAEDPFVASSLLHSYIRLGA 67
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN--- 180
AR +FD +P++ N+V W++++ GY +A A LLE+ G N
Sbjct: 68 TGAARSVFDRMPEK--NVVGWSALIAGYSARGDAEAAW-----GLLEQMRSAGVEPNVIT 120
Query: 181 -------------------------SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
S+ F D+ ++ LSA V V + HG+V+
Sbjct: 121 WNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVV 180
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD---------------GM----------- 249
K G + V LID Y + G D +VF G+
Sbjct: 181 KAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALL 240
Query: 250 ---------IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+E + V+W SI+A QNG EA+D+F M +S V+ N+VT+ VL A
Sbjct: 241 LFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTM-QSIGVEPNSVTIPCVLPAF 299
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
A++ L G+ H ++ V VG++++DMY KCG+ AR F+ M +NV SW
Sbjct: 300 ANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWN 359
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
AMI GY MH A A+ LF M K +P+ +TF VL ACS AGL +EG + N M
Sbjct: 360 AMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQG 419
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
I P +EHY CMV LLGR+GKL EAYDLI M + D +WGSLLG+CR++ NV L E+
Sbjct: 420 HGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEV 479
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
AA+KLF+LEP N G +VLLSNIYA+ W+ V R R MKN L K G S +E++ KVH
Sbjct: 480 AAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVH 539
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA- 599
L GD HP I E L +L +++ +G+ V+HDV+++EK+ L +HSEKLA
Sbjct: 540 MLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAV 599
Query: 600 -----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
NLR+CGDCH ++ IS REI VRD+ RFH+FKDG CSCGD
Sbjct: 600 ALGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGD 659
Query: 643 YW 644
YW
Sbjct: 660 YW 661
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 183/398 (45%), Gaps = 40/398 (10%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ NV +WN +++ L R G +++A+ A M P + CA+ + + ++ GKQ
Sbjct: 115 EPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQ 174
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H G D V +ALIDMY KCG + ++F E ++ S +++ G +N
Sbjct: 175 VHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHM--DVASCNALVAGLSRN 232
Query: 155 DNAREALLLFKEFLLEESECGGAS-----------------------ENSDNVFVDSVAI 191
EALLLF+EF+ E S S V +SV I
Sbjct: 233 AQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTI 292
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
VL A + V AH F +++GF +V VG+ L+D YA+ G +R +FD M
Sbjct: 293 PCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPS 352
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
++ V+WN++I YA +G AA A+ +F M K K + VT + VL A + G+ G+
Sbjct: 353 RNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQ-KPDLVTFTCVLGACSQAGLTEEGRR 411
Query: 312 IHDQV-----IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAG 365
+++ I +E ++ + + G++D A N+M E + W +++
Sbjct: 412 YFNEMQQGHGISPRMEHY----ACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGS 467
Query: 366 ---YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
YG A A + +++ + G NY+ ++ ++
Sbjct: 468 CRVYGNVLLAEVAAEKLFQL-EPGNAGNYVLLSNIYAS 504
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 137/285 (48%), Gaps = 28/285 (9%)
Query: 7 SSVSSVVSNVDKHSTNTNLTTLFNKYVDKN---NVFSWNSVIADLARGGDSVEALRAFSS 63
+S +++V+ + +++ + LF +++ + NV SW S++A + G +EA+ F +
Sbjct: 220 ASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRT 279
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M+ + + P T PC + + + + L G+ AH + GF DV+V SAL+DMY+KCG+
Sbjct: 280 MQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGK 339
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
AR +FD +P RN+VSW +M+ GY + +A A+ LF S
Sbjct: 340 ARHARTIFDAMPS--RNVVSWNAMIGGYAMHGDAANAVQLF------------CSMQKCK 385
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK----RGFDSEVGVGNTLIDAYARGGHV 239
D V VL ACS+ G+TE + + G + ++ R G +
Sbjct: 386 QKPDLVTFTCVLGACSQA---GLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKL 442
Query: 240 DVSRKVFDGM-IEKDAVTWNSIIA---IYAQNGLAAEALDVFDQM 280
D + + + M E D+ W S++ +Y LA A + Q+
Sbjct: 443 DEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQL 487
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/609 (39%), Positives = 354/609 (58%), Gaps = 43/609 (7%)
Query: 53 DSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS 112
DSV+A R+L+ TP + I +C+ L + H F VF+ +
Sbjct: 53 DSVDA-------RELAATP--RLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDN 103
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
+LI +Y KCG ++DAR++FD +P R ++ SWTS++ GY QND EAL L L
Sbjct: 104 SLIHLYCKCGAVADARRVFDGMPAR--DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRF 161
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
+ G AS+L A +G+ E H +K + +V VG+ L+D
Sbjct: 162 KPNG------------FTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDM 209
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
YAR G +D++ VFD + K+ V+WN++IA +A+ G L +F +M ++ + T
Sbjct: 210 YARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRN-GFEATHFT 268
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
S+V AIA +G L GK +H +IK S VG +I+DMY K G + ARK F+++
Sbjct: 269 YSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVD 328
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
+K+V +W +M+ + + REA+ F +M K GV N ITF+S+L+ACSH GLV+EG
Sbjct: 329 KKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQ 388
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ + M E+N+EP ++HY +VDLLGRAG L +A I M +K VWG+LLG+CR+H
Sbjct: 389 YFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMH 447
Query: 473 KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSL 532
KN +G+ AA +FEL+P++ G VLL NIYA+ G+W+ R R +MK + K P S
Sbjct: 448 KNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSW 507
Query: 533 VELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLR 592
VE+ VH F+ D HP+ E+IY+ EE+++++++ GYV + V+ VD++E++ L+
Sbjct: 508 VEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQ 567
Query: 593 IHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFK 634
HSEK+A N+R+CGDCH+ R ISKV REIVVRD+ RFH+F
Sbjct: 568 YHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFS 627
Query: 635 DGLCSCGDY 643
G CSCGDY
Sbjct: 628 SGSCSCGDY 636
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 167/335 (49%), Gaps = 16/335 (4%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SW S+IA A+ EAL M + P TF +K+ A G+Q H
Sbjct: 132 SWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALT 191
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
+ +H DV+V SAL+DMY++CG + A +FD++ +N VSW +++ G+ + +
Sbjct: 192 VKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLES--KNGVSWNALIAGFARKGDGET 249
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
LL+F E + +SV SA + + + H +IK G
Sbjct: 250 TLLMFAEM------------QRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGE 297
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
VGNT++D YA+ G + +RKVFD + +KD VTWNS++ +AQ GL EA+ F++
Sbjct: 298 RLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEE 357
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M K V N +T ++L A +H G+++ GK D + + +LE + +++D+ + G
Sbjct: 358 MRK-CGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAG 416
Query: 340 QVDLARKAFNQMKEKNVRS-WTAMIAGYGMHCRAR 373
++ A +M K + W A++ MH A+
Sbjct: 417 LLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK 451
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 168/385 (43%), Gaps = 79/385 (20%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ KN V SWN++IA AR GD L F+ M++ T T+ + + +
Sbjct: 222 VFDQLESKNGV-SWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIG 280
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H G FV + ++DMY+K G + DARK+FD + + +++V+W SM
Sbjct: 281 ALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDK--KDVVTWNSM 338
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
LT + Q REA+ F+E +CG V ++ + S+L+ACS
Sbjct: 339 LTAFAQYGLGREAVTHFEEM----RKCG--------VHLNQITFLSILTACS-------- 378
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM----IEKDAVTWNSIIAI 263
HG ++K G ++ FD M +E + + +++ +
Sbjct: 379 ---HGGLVKEG------------------------KQYFDMMKEYNLEPEIDHYVTVVDL 411
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
+ GL +AL +M +K A A+L + ++G+ D V ++D ++
Sbjct: 412 LGRAGLLNDALVFIFKM----PMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDD 467
Query: 324 SVIVGTSII--DMYCKCGQVDLARKAFNQMKEKNVR-----SWTAM-------IAGYGMH 369
+ G ++ ++Y GQ D A + MK V+ SW + +A H
Sbjct: 468 T---GPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTH 524
Query: 370 CRAREAL----DLFYKMIKAGVRPN 390
R+ E ++ ++ KAG PN
Sbjct: 525 PRSEEIYKKWEEISIQIRKAGYVPN 549
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 248/674 (36%), Positives = 381/674 (56%), Gaps = 74/674 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA-LHDLHS 91
+ + +VFSW +I+ AR G S + L F+ M+ + P + T +KSCS+ ++D
Sbjct: 347 IPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRI 406
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
GK H G D ++++++D Y KC A KLF + ++ + VSW M++ Y
Sbjct: 407 GKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEK--DTVSWNIMMSSY 464
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVD------------------------ 187
+Q + ++++ LF++ G S N +D
Sbjct: 465 LQIGDMQKSVDLFRQL-------PGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPA 517
Query: 188 ----SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ +IA VL+ S ++V G+ + H V+K G + V N+LID Y + G ++ +
Sbjct: 518 FNKLTFSIALVLA--SSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKAS 575
Query: 244 KVFDGMIEK---------------DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
+F + ++ ++V+W+S+++ Y QNG +AL F M+ S V+
Sbjct: 576 VIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICS-QVEV 634
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+ TL++V+ A A GVL LG+ +H + K+ V +G+SIIDMY KCG ++ A F
Sbjct: 635 DKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIF 694
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
NQ K++NV WT+MI+G +H + REA+ LF MI G+ PN ++FV VL+ACSHAGL++
Sbjct: 695 NQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLE 754
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
EG + M + I PG EH+ CMVDL GRAG+L E + I + VW S L +
Sbjct: 755 EGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSS 814
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
CR+HKN+++G KKL ELEP + G ++L S+I A RWE+ + RSLM+ R + K P
Sbjct: 815 CRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNP 874
Query: 529 GFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKE 588
S ++L+ +VH+F++GD+ HPQ KIY YL+EL +L+E+GY TD+T V+ DV+QE+++
Sbjct: 875 SQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQ 934
Query: 589 MTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRF 630
+ L HSEKLA NLRVC DCH I+ S+++ REI++RD RF
Sbjct: 935 VLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASELLGREIIIRDIHRF 994
Query: 631 HYFKDGLCSCGDYW 644
H+FK G CSC DYW
Sbjct: 995 HHFKHGHCSCADYW 1008
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 210/427 (49%), Gaps = 72/427 (16%)
Query: 114 LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
L+++Y+K L A K+F+EIPQ ++ SWT +++G+ + + + L LF + + ++
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQT--DVFSWTVLISGFARIGLSADVLGLFTK-MQDQGV 383
Query: 174 CGGASENSDNVFVDSVAIASVLSACS-RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
C N F S+ VL +CS V + + +G HG++++ G D + + N+++D
Sbjct: 384 C-------PNQFTLSI----VLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDY 432
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM------------ 280
Y + + K+F M EKD V+WN +++ Y Q G +++D+F Q+
Sbjct: 433 YVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMI 492
Query: 281 ------------------VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
+ + N +T S L+ + L VL LGK IH QV+K+ +
Sbjct: 493 DGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVL 552
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR---------------SWTAMIAGYG 367
+ V S+IDMYCKCG+++ A F + +++ SW++M++GY
Sbjct: 553 DDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYV 612
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH---WLNTMGHEFNIE 424
+ R +AL F MI + V + T SV+SAC+ AG+++ G ++ +GH ++
Sbjct: 613 QNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVF 672
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
G ++D+ + G L +A+ LI + V+W S++ C +H A +
Sbjct: 673 LG----SSIIDMYVKCGSLNDAW-LIFNQAKDRNVVLWTSMISGCALHGQGR----EAVR 723
Query: 485 LFELEPN 491
LFEL N
Sbjct: 724 LFELMIN 730
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
Query: 207 TEGAHGFVIKRGFDSEVGV-GNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+E H +IK G VG+ GN L++ YA+ +++ + K+F+ + + D +W +I+ +A
Sbjct: 307 SEVLHAKLIKNGC---VGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFA 363
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA-HLGVLRLGKCIHDQVIKMDLEES 324
+ GL+A+ L +F +M + V N TLS VL + + ++ R+GK IH +++ L+
Sbjct: 364 RIGLSADVLGLFTKM-QDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLD 422
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
++ SI+D Y KC A K F M EK+ SW M++ Y ++++DLF ++
Sbjct: 423 AVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQL 480
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
I G ++++Y K ++ A K F ++ + +V SWT +I+G+ + + L LF KM
Sbjct: 322 IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQ 381
Query: 386 GVRPNYITFVSVLSAC------SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
GV PN T VL +C S G GW N + + + + Y G
Sbjct: 382 GVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGY 441
Query: 440 AGKLKEAYDLIEGMKVKADFVVW----GSLLGACRIHKNVDL 477
A KL G+ + D V W S L + K+VDL
Sbjct: 442 AEKLF-------GLMAEKDTVSWNIMMSSYLQIGDMQKSVDL 476
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/698 (36%), Positives = 367/698 (52%), Gaps = 94/698 (13%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F + D++ V SW +I L R G +A++ F M P++ T + SC+A+
Sbjct: 303 VFAEMPDRDAV-SWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAME 361
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI--------- 138
G++ H G V V+++++ MY KCG+ AR +F+ + R
Sbjct: 362 ACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVS 421
Query: 139 --------------------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
R+IVSW +++ GY QN AL F L
Sbjct: 422 LYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRML---------- 471
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
++ ++ D+ + SVLSAC+ + + + + H ++++ G + N LI YA+ G
Sbjct: 472 -SASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGS 530
Query: 239 VDVSRKV---------------------------------FDGMIEKDAVTWNSIIAIYA 265
V+ +R++ FD M +D + W ++I Y
Sbjct: 531 VETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYH 590
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QNG EA+++F M+ + N+ TL+AVL A A L L GK IH + I+ E+SV
Sbjct: 591 QNGQNDEAMELFRSMIL-IGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSV 649
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQM-KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V +II +Y + G V LAR+ F+Q+ K +WT+MI H +A+ LF +M++
Sbjct: 650 SVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVR 709
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
GV+P++IT+V VLSAC+HAG V +G + M +E I P + HY CMVDL RAG L
Sbjct: 710 VGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLT 769
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
EA++ I+ M V D VVWGSLL ACR+ KN DL E+AA KL ++P+N G + L+N+Y+
Sbjct: 770 EAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYS 829
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
GRW D R L K++ + K GFS +RGKVH F D HPQ + IY E+
Sbjct: 830 ACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWE 889
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
++++ G+V D+ SV+HDVD E KE L HSEKLA NLRVC D
Sbjct: 890 EIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCND 949
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CHT I+ ISK VDREI+VRD+ RFH+F+DG CSC DYW
Sbjct: 950 CHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 225/486 (46%), Gaps = 90/486 (18%)
Query: 106 RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
R+ F ++L+ +Y+K G L DA +F E+P R + VSWT M+ G ++ +A+ K
Sbjct: 279 RNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDR--DAVSWTIMIVGLNRSGRFWDAV---K 333
Query: 166 EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGV 225
FL SE S+ + +VLS+C+ + GV H FV+K G S V V
Sbjct: 334 TFLDMVSEGFAPSQ---------FTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPV 384
Query: 226 GNTLIDAYARGGHVDVSRKVFD-------------------------------GMIEKDA 254
N+++ Y + G + +R VF+ M+E+
Sbjct: 385 ANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI 444
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
V+WN+IIA Y QNGL AL F +M+ ++ ++ +A T+++VL A A+L +L++GK +H
Sbjct: 445 VSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHS 504
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ------------------------ 350
+++ + S + ++I Y K G V+ AR+ +Q
Sbjct: 505 YILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDT 564
Query: 351 ---------MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
M ++V +WTAMI GY + + EA++LF MI G PN T +VLSAC
Sbjct: 565 KQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSAC 624
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+ + G ++ E V ++ + R+G + A + + + + + +
Sbjct: 625 ASLAYLDYGKQ-IHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETIT 683
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLSNIYANAGRWEDVERT 515
W S++ A H LGE A LFE ++P++ Y +LS A+AG + +R
Sbjct: 684 WTSMIVAMAQH---GLGEQAV-VLFEEMVRVGVKPDHITYVGVLSAC-AHAGFVDKGKRY 738
Query: 516 RSLMKN 521
M+N
Sbjct: 739 YEQMQN 744
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 209/432 (48%), Gaps = 46/432 (10%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLT-TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
+S S +V+ ++ H L ++F V+++ + SWN++IA + G AL+ FS
Sbjct: 411 RSVSSWNVMVSLYTHQGRMELAVSMFENMVERS-IVSWNTIIAGYNQNGLDGMALKFFSR 469
Query: 64 MRKLS-LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
M S + P T + +C+ L L GKQ H G + +ALI Y+K G
Sbjct: 470 MLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSG 529
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF-----KEFLLEESECGGA 177
+ AR++ D+ N++S+T++L GYV+ + ++A +F ++ + + G
Sbjct: 530 SVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGY 589
Query: 178 SENSDN-----VF---------VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEV 223
+N N +F +S +A+VLSAC+ + + H I+ + V
Sbjct: 590 HQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSV 649
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
V N +I YAR G V ++R+VFD + K+ +TW S+I AQ+GL +A+ +F++MV+
Sbjct: 650 SVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVR 709
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS----IIDMYCKC 338
VK + +T VL A AH G + GK ++Q M E ++ S ++D++ +
Sbjct: 710 -VGVKPDHITYVGVLSACAHAGFVDKGKRYYEQ---MQNEHGIVPQMSHYACMVDLHARA 765
Query: 339 GQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG----VRPN--- 390
G + A + +M + W +++A CR R+ DL + AG + P+
Sbjct: 766 GLLTEAHEFIQRMPVAPDTVVWGSLLAA----CRVRKNADL--AELAAGKLLSIDPHNSG 819
Query: 391 -YITFVSVLSAC 401
Y +V SAC
Sbjct: 820 AYSALANVYSAC 831
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/637 (37%), Positives = 356/637 (55%), Gaps = 32/637 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
T+F K + +V SWN+ I+ G AL M+ L P T +K+C+
Sbjct: 260 ATVFEK-MPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAG 318
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ G+Q H D FV+ L+DMY+K G L DARK+FD +P+R +++ W
Sbjct: 319 AGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRR--DLILWN 376
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
++++G + E L LF E ++ V+ +ASVL + +
Sbjct: 377 ALISGCSHDGRHGEVLSLFHRMRKE----------GLDLDVNRTTLASVLKSTASSEAIC 426
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
T H K G S+ V N LID+Y + G +D + KVF D ++ +++ +
Sbjct: 427 HTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALS 486
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q +A+ +F QM++ ++ ++ LS++L A L GK +H +IK V
Sbjct: 487 QCDHGEDAIKLFVQMLRK-GLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDV 545
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
G +++ Y KCG ++ A AF+ + E+ + SW+AMI G H + ALDLF++M+
Sbjct: 546 FAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDE 605
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
GV PN+IT SVLSAC+HAGLV + + +M F I+ EHY CM+D+LGRAGKL++
Sbjct: 606 GVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLED 665
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A +L+ M +A+ VWG+LLGA R+H++ +LG +AA+KLF LEP G HVLL+N YA+
Sbjct: 666 AMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYAS 725
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
AG W+++ + R LMK+ + K P S VE++ KVH F+VGDK HP IY L EL
Sbjct: 726 AGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDL 785
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
+ + GYV ++ +HDVD+ EKE+ L HSE+LA NLR+C DC
Sbjct: 786 MNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDC 845
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H + ISK+V REI++RD RFH+F +G CSCGDYW
Sbjct: 846 HVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 201/382 (52%), Gaps = 25/382 (6%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+F++ D +V SW+S++ + G +AL AF +MR + P +K C+
Sbjct: 58 AVFDEIPDPCHV-SWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CAP- 114
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI--PQRIRNIVSW 144
D+ G Q H A DVFV++AL+ +Y G + +AR++FDE RN VSW
Sbjct: 115 -DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSW 173
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
+M++ YV+ND + +A+ +F+E + S N F + V++AC+
Sbjct: 174 NTMISAYVKNDQSGDAIGVFREMVW--------SGERPNEF----GFSCVVNACTGSRDL 221
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
HG V++ G++ +V N L+D Y++ G ++++ VF+ M D V+WN+ I+
Sbjct: 222 EAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGC 281
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK--MDLE 322
+G AL++ QM KS+ + N TLS+VL A A G LG+ IH ++K D +
Sbjct: 282 VTHGHDHRALELLLQM-KSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFD 340
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
E V VG ++DMY K G +D ARK F+ M +++ W A+I+G R E L LF++M
Sbjct: 341 EFVAVG--LVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRM 398
Query: 383 IKAG--VRPNYITFVSVLSACS 402
K G + N T SVL + +
Sbjct: 399 RKEGLDLDVNRTTLASVLKSTA 420
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 188/411 (45%), Gaps = 44/411 (10%)
Query: 72 TRSTFPCAIKSCSALHDLHSGKQAH----QQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
T T A+ L +G H + + GF S+ L+ +YS+C S A
Sbjct: 3 TPETIGSALARFGTSRSLFAGAHLHSHLLKSGLLAGF------SNHLLTLYSRCRLPSAA 56
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R +FDEIP VSW+S++T Y N R+ALL F+ C +
Sbjct: 57 RAVFDEIPDPCH--VSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPC------------N 102
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
A+ VL V H + +V V N L+ Y G VD +R++FD
Sbjct: 103 EFALPVVLKCAPDVRFGAQV---HALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFD 159
Query: 248 GMI----EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+ E++AV+WN++I+ Y +N + +A+ VF +MV S + + N S V+ A
Sbjct: 160 EYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGE-RPNEFGFSCVVNACTGS 218
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L G+ +H V++ E+ V +++DMY K G +++A F +M +V SW A I
Sbjct: 219 RDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFI 278
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
+G H AL+L +M +G+ PN T SVL AC+ AG L H F +
Sbjct: 279 SGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFN-----LGRQIHGFMV 333
Query: 424 EPGVEHYG-----CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
+ V + +VD+ + G L +A + + M + D ++W +L+ C
Sbjct: 334 K-AVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMP-RRDLILWNALISGC 382
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/614 (39%), Positives = 361/614 (58%), Gaps = 38/614 (6%)
Query: 53 DSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS 112
+S L + SL P R+ + +K C+ L L GK H F D+ + +
Sbjct: 71 NSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKN 130
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN---DNAREALLLFKEFLL 169
+++ MY+KCG L AR++FDE+ ++++V+WTSM+TGY Q+ +A AL+LF E +
Sbjct: 131 SILFMYAKCGSLEIARQVFDEMC--VKDVVTWTSMITGYSQDGYASSATTALVLFLEMV- 187
Query: 170 EESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTL 229
D + + A++S++ C + + HG K GF V VG++L
Sbjct: 188 -----------RDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSL 236
Query: 230 IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCN 289
+D YAR G + SR VFD + K+ V+WN++I+ +A+ G EAL +F +M +
Sbjct: 237 VDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQRE-GFGAT 295
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
T SA+L + + G L GK +H ++K + VG +++ MY K G + A+K F+
Sbjct: 296 EFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFD 355
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM-IKAGVRPNYITFVSVLSACSHAGLVQ 408
++ + +V S +M+ GY H +EA++LF +M + + PN ITF+SVL+ACSHAGL+
Sbjct: 356 RLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLD 415
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
EG ++ M ++ +EP + HY +VDL GRAG L +A IE M ++ + +WG+LLGA
Sbjct: 416 EGLYYFELM-KKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGA 474
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
++HKN ++G AA+K+ EL+P G H LLSNIYA+AG+W+DV + R MK+ L K P
Sbjct: 475 SKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEP 534
Query: 529 GFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKE 588
S VE+ VH F D HPQ K+YE E LN K++E+GYV D + V VDQ+EKE
Sbjct: 535 ACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKE 594
Query: 589 MTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRF 630
+ L+ HSEKLA N+RVCGDCH+ I+ +S VV REI+VRD+ RF
Sbjct: 595 LNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRF 654
Query: 631 HYFKDGLCSCGDYW 644
H+F+DG CSC DYW
Sbjct: 655 HHFRDGSCSCRDYW 668
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 260/725 (35%), Positives = 389/725 (53%), Gaps = 94/725 (12%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M L + S ++V+S K + F++ +++V SW ++I G +A+R
Sbjct: 75 MPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV-SWTTMIVGYKNIGQYHKAIRV 133
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
M K + PT+ T + S +A + +GK+ H G +V VS++L++MY+K
Sbjct: 134 MGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 121 CGELSDARKLFDEIPQRI-----------------------------RNIVSWTSMLTGY 151
CG+ A+ +FD + R R+IV+W SM++G+
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
Q AL +F + L + + D +ASVLSAC+ + + + H
Sbjct: 254 NQRGYDLRALDIFSKMLRDSL-----------LSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV-----------------FDGMI---- 250
++ GFD V N LI Y+R G V+ +R++ DG I
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 251 ------------EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
++D V W ++I Y Q+G EA+++F MV + N+ TL+A+L
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-RPNSYTLAAMLS 421
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVR 357
+ L L GK IH +K SV V ++I MY K G + A +AF+ ++ E++
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SWT+MI H A EAL+LF M+ G+RP++IT+V V SAC+HAGLV +G + + M
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMM 541
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
I P + HY CMVDL GRAG L+EA + IE M ++ D V WGSLL ACR+HKN+DL
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDL 601
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG 537
G++AA++L LEP N G + L+N+Y+ G+WE+ + R MK+ R+ K GFS +E++
Sbjct: 602 GKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKH 661
Query: 538 KVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
KVH F V D HP+ +IY ++++ +++++GYV D SV+HD+++E KE LR HSEK
Sbjct: 662 KVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEK 721
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA NLRVC DCHT I+ ISK+V REI+VRD+ RFH+FKDG CS
Sbjct: 722 LAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCS 781
Query: 640 CGDYW 644
C DYW
Sbjct: 782 CRDYW 786
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 70/286 (24%)
Query: 188 SVAIASVLSACSRVTVNGVTEG--------AHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
++++++L C+ + V + H VIK G V + N L++ Y++ G+
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYA 65
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV-------- 291
+RK+FD M + A +WN++++ Y++ G + FDQ+ + V +
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG 125
Query: 292 ----------------------TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
TL+ VL ++A + GK +H ++K+ L +V V
Sbjct: 126 QYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSN 185
Query: 330 SIIDMYCKC-------------------------------GQVDLARKAFNQMKEKNVRS 358
S+++MY KC GQ+DLA F QM E+++ +
Sbjct: 186 SLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVT 245
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAG-VRPNYITFVSVLSACSH 403
W +MI+G+ ALD+F KM++ + P+ T SVLSAC++
Sbjct: 246 WNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 249/693 (35%), Positives = 354/693 (51%), Gaps = 93/693 (13%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + SW ++ L R G EA++ M TPT+ T + SC+ G
Sbjct: 18 MPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVG 77
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI-------------- 138
++ H G V V++++++MY KCG+ A +F+ +P R
Sbjct: 78 RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHL 137
Query: 139 ---------------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
R+IVSW +M+ GY QN +AL LF L E S
Sbjct: 138 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESS----------- 186
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ D I SVLSAC+ + + + H ++++ V N LI YA+ G V+ +R
Sbjct: 187 MAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENAR 246
Query: 244 KVFDGMIE---------------------------------KDAVTWNSIIAIYAQNGLA 270
++ D +E +D V W ++I Y QNG
Sbjct: 247 RIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRN 306
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA+D+F M+ + + N+ TL+AVL A L L GK IH + I+ LE+S V +
Sbjct: 307 DEAIDLFRSMI-TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNA 365
Query: 331 IIDMYCKCGQVDLARKAFNQM-KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
II MY + G AR+ F+Q+ K +WT+MI H + EA+ LF +M++AGV P
Sbjct: 366 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 425
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ IT+V VLSACSHAG V EG + + + +E I P + HY CMVDLL RAG EA +
Sbjct: 426 DRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEF 485
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I M V+ D + WGSLL ACR+HKN +L E+AA+KL ++PNN G + ++N+Y+ GRW
Sbjct: 486 IRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRW 545
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
D R K + + K GFS +R K+H F D HPQ + +Y + +++
Sbjct: 546 SDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGA 605
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
G+V D+ SV+HDVD E KE L HSEKLA NLRVC DCH I
Sbjct: 606 GFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAI 665
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ ISKV DREI+VRD+ RFH+F+DGLCSC DYW
Sbjct: 666 KAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 209/454 (46%), Gaps = 89/454 (19%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
M++K G L+DAR +F E+P+R + VSWT M+ G + EA+ + LL+ +
Sbjct: 1 MFAKSGRLADARGVFAEMPER--DAVSWTVMVVGLNRAGRFGEAI----KTLLDMT---- 50
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
+D + +VLS+C+ V H FV+K G S V V N++++ Y +
Sbjct: 51 ----ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKC 106
Query: 237 -------------------------------GHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
G +D++ +F+ M ++ V+WN++IA Y
Sbjct: 107 GDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYN 166
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK------- 318
QNGL A+AL +F +M+ + + + T+++VL A A+LG +R+GK +H +++
Sbjct: 167 QNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNS 226
Query: 319 --------------------------MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
M+ + +VI T++++ Y K G ++ AR+ F M
Sbjct: 227 QVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMN 286
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
++V +WTAMI GY + R EA+DLF MI G PN T +VLS C+ + G
Sbjct: 287 NRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ 346
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++ +E ++ + R+G A + + + + + + W S++ A H
Sbjct: 347 -IHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 405
Query: 473 KNVDLGEIAAKKLFE------LEPNNCGYHVLLS 500
GE A LFE +EP+ Y +LS
Sbjct: 406 GQ---GE-EAVGLFEEMLRAGVEPDRITYVGVLS 435
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 206/441 (46%), Gaps = 57/441 (12%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLT-TLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
M + SS +++VS ++ H +L +LF D++ + SWN++IA + G +AL+
Sbjct: 119 MPVRSVSSWNAMVS-LNTHLGRMDLAESLFESMPDRS-IVSWNAMIAGYNQNGLDAKALK 176
Query: 60 AFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMY 118
FS M + S+ P T + +C+ L ++ GKQ H + V++ALI Y
Sbjct: 177 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 236
Query: 119 SKCGELSDARKLFDEIPQ-------------------------------RIRNIVSWTSM 147
+K G + +AR++ D+ + R++V+WT+M
Sbjct: 237 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAM 296
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY QN EA+ LF+ + CG +S +A+VLS C+ +
Sbjct: 297 IVGYEQNGRNDEAIDLFRSMI----TCGPEP--------NSYTLAAVLSVCASLACLDYG 344
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQ 266
+ H I+ + V N +I YAR G +R++FD + K+ +TW S+I AQ
Sbjct: 345 KQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQ 404
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESV 325
+G EA+ +F++M+++ V+ + +T VL A +H G + GK +DQ+ + + +
Sbjct: 405 HGQGEEAVGLFEEMLRA-GVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEM 463
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
++D+ + G A++ +M E + +W ++++ +H A A K++
Sbjct: 464 SHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLS 523
Query: 385 AGVRPN----YITFVSVLSAC 401
+ PN Y +V SAC
Sbjct: 524 --IDPNNSGAYSAIANVYSAC 542
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 3 LSKSSSVS-SVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
L +SSSVS ++++ + + +F++ + +W S+I LA+ G EA+ F
Sbjct: 356 LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 415
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHR---DVFVSSALIDMY 118
M + + P R T+ + +CS ++ GK+ + Q I H+ ++ + ++D+
Sbjct: 416 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQ--IKNEHQIAPEMSHYACMVDLL 473
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
++ G S+A++ +P + ++W S+L+ + NA A L ++ L + GA
Sbjct: 474 ARAGLFSEAQEFIRRMPVE-PDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAY 532
Query: 179 ENSDNVFVDSVAIASVLSACSR 200
AIA+V SAC R
Sbjct: 533 S----------AIANVYSACGR 544
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/647 (38%), Positives = 371/647 (57%), Gaps = 43/647 (6%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N +F+K + + NV +W +I + G EA+R F M + T +C
Sbjct: 221 NAYKVFDK-MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC---GELSDARKLFDEIPQRIRN 140
+ L +L GKQ H A G DV +L+DMY+KC G + D RK+FD + +
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDH--S 335
Query: 141 IVSWTSMLTGYVQNDN-AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++SWT+++TGY++N N A EA+ LF E + + G E + F +S AC
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQ-----GHVEPNHFTF------SSAFKACG 384
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
++ V + G KRG S V N++I + + ++ +++ F+ + EK+ V++N+
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+ +N +A + ++ + ++ +A T +++L +A++G +R G+ IH QV+K+
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITER-ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL 503
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
L + V ++I MY KCG +D A + FN M+ +NV SWT+MI G+ H A L+ F
Sbjct: 504 GLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETF 563
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
+MI+ GV+PN +T+V++LSACSH GLV EGW N+M + I+P +EHY CMVDLL R
Sbjct: 564 NQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
AG L +A++ I M +AD +VW + LGACR+H N +LG++AA+K+ EL+PN ++ L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683
Query: 500 SNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYL 559
SNIYA AG+WE+ R MK R L K G S +E+ K+H F VGD HP +IY+ L
Sbjct: 684 SNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDEL 743
Query: 560 EELNVKLQEVGYVTDMTSVIHDVDQEEKEMT----LRIHSEKLA---------------- 599
+ L +++ GYV D V+H +++E E L HSEK+A
Sbjct: 744 DRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRV 803
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH ++ IS V REIV+RD RFH+FKDG CSC DYW
Sbjct: 804 FKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 237/485 (48%), Gaps = 43/485 (8%)
Query: 51 GGDSVEALRAFSSMRKLSLTPTRS-TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVF 109
GD A+ A M + + P S TF +KSC D GK H + F D
Sbjct: 39 AGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV 98
Query: 110 VSSALIDMYSKCGELSDARKLFDEIPQRI--RNIVSWTSMLTGYVQNDNAREALLLFKEF 167
+ ++LI +YSK G+ + A +F E +R R++VSW++M+ Y N +A+ +F EF
Sbjct: 99 LYNSLISLYSKSGDSAKAEDVF-ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF 157
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG-FDSEVGVG 226
L E G + + +V+ ACS GV GF++K G F+S+V VG
Sbjct: 158 L----ELG--------LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVG 205
Query: 227 NTLIDAYARG-GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD 285
+LID + +G + + KVFD M E + VTW +I Q G EA+ F MV S
Sbjct: 206 CSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS-G 264
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC---GQVD 342
+ + TLS+V A A L L LGK +H I+ L + V S++DMY KC G VD
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVD 322
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCR-AREALDLFYKMIKAG-VRPNYITFVSVLSA 400
RK F++M++ +V SWTA+I GY +C A EA++LF +MI G V PN+ TF S A
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 401 CSHAGLVQEGWHWLNTMGHEFN--IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
C + + G +G F + ++ + ++ ++++A E + K +
Sbjct: 383 CGNLSDPRVGKQ---VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-N 438
Query: 459 FVVWGSLL-GACRIHKNVDLGEIAAKKLFELEPNNCG-----YHVLLSNIYANAGRWEDV 512
V + + L G CR N++ E A K L E+ G + LLS + AN G
Sbjct: 439 LVSYNTFLDGTCR---NLNF-EQAFKLLSEITERELGVSAFTFASLLSGV-ANVGSIRKG 493
Query: 513 ERTRS 517
E+ S
Sbjct: 494 EQIHS 498
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 193/383 (50%), Gaps = 24/383 (6%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K +V SW++++A G ++A++ F +L L P + I++CS + G+
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 95 AHQQAFIFG-FHRDVFVSSALIDMYSKCGE--LSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G F DV V +LIDM+ K GE +A K+FD++ + N+V+WT M+T
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSE--LNVVTWTLMITRC 244
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+Q REA+ F + +L E D ++SV SAC+ + + + H
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFES------------DKFTLSSVFSACAELENLSLGKQLH 292
Query: 212 GFVIKRGFDSEVGVGNTLIDAYAR---GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN- 267
+ I+ G +V +L+D YA+ G VD RKVFD M + ++W ++I Y +N
Sbjct: 293 SWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNC 350
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
LA EA+++F +M+ V+ N T S+ A +L R+GK + Q K L + V
Sbjct: 351 NLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSV 410
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
S+I M+ K +++ A++AF + EKN+ S+ + G + +A L ++ + +
Sbjct: 411 ANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
Query: 388 RPNYITFVSVLSACSHAGLVQEG 410
+ TF S+LS ++ G +++G
Sbjct: 471 GVSAFTFASLLSGVANVGSIRKG 493
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/584 (39%), Positives = 341/584 (58%), Gaps = 34/584 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++ C+ G+ H Q G D+ S+ LI+MYSKC + ARK F+E+P ++
Sbjct: 50 LQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMP--VK 107
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++VSW +++ QN REAL L + E + + I+SVL C+
Sbjct: 108 SLVSWNTVIGALTQNAEDREALKLLIQMQREGTP------------FNEFTISSVLCNCA 155
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
H F IK DS VG L+ YA+ + + ++F+ M EK+AVTW+S
Sbjct: 156 FKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSS 215
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
++A Y QNG EAL +F + + +S+ + A A L L GK +H K
Sbjct: 216 MMAGYVQNGFHEEALLIFRN-AQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKS 274
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDL 378
++ V +S+IDMY KCG + A F + E +++ W AMI+G+ H RA EA+ L
Sbjct: 275 GFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMIL 334
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
F KM + G P+ +T+V VL+ACSH GL +EG + + M + N+ P V HY CM+D+LG
Sbjct: 335 FEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILG 394
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVL 498
RAG + +AYDLIE M A +WGSLL +C+I+ N++ EIAAK LFE+EPNN G H+L
Sbjct: 395 RAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHIL 454
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEY 558
L+NIYA +W++V R R L++ + K G S +E++ K+H+F VG++ HPQ + IY
Sbjct: 455 LANIYAANKKWDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAK 514
Query: 559 LEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------N 600
L+ L V+L+++ Y D ++ +HDV++ K+M LR HSEKLA N
Sbjct: 515 LDNLVVELKKLNYKVDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKN 574
Query: 601 LRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
LR+CGDCHT ++L+SK REI+VRD+ RFH+FKDG CSCG++W
Sbjct: 575 LRICGDCHTFMKLVSKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 177/349 (50%), Gaps = 37/349 (10%)
Query: 29 FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK---------LSLTPTRSTFPCA 79
FN+ K+ V SWN+VI L + + EAL+ M++ +S F CA
Sbjct: 101 FNEMPVKSLV-SWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCA 159
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
I C LH S K A + FV +AL+ +Y+KC + DA ++F+ +P+ +
Sbjct: 160 ILECMQLHAF-SIKAA--------IDSNCFVGTALLHVYAKCSSIKDASQMFESMPE--K 208
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N V+W+SM+ GYVQN EALL+F+ ++ G + D I+S +SAC+
Sbjct: 209 NAVTWSSMMAGYVQNGFHEEALLIFR-----NAQLMGFDQ-------DPFMISSAVSACA 256
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWN 258
+ + H K GF S + V ++LID YA+ G + + VF G++E + V WN
Sbjct: 257 GLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWN 316
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
++I+ +A++ A EA+ +F++M + + VT VL A +H+G+ G+ D +++
Sbjct: 317 AMISGFARHARAPEAMILFEKMQQRGFFP-DDVTYVCVLNACSHMGLHEEGQKYFDLMVR 375
Query: 319 M-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAG 365
+L SV+ + +ID+ + G V A +M S W +++A
Sbjct: 376 QHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLAS 424
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 166/352 (47%), Gaps = 7/352 (1%)
Query: 172 SECGGASENSDNVF-VDSVA-IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTL 229
SE S +NV +D V+ + +L C++ + H +I+ G + ++ N L
Sbjct: 25 SEAKPESSKVENVVHIDRVSNLHYLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNML 84
Query: 230 IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCN 289
I+ Y++ VD +RK F+ M K V+WN++I QN EAL + QM + N
Sbjct: 85 INMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQRE-GTPFN 143
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
T+S+VL A + +H IK ++ + VGT+++ +Y KC + A + F
Sbjct: 144 EFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFE 203
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
M EKN +W++M+AGY + EAL +F G + S +SAC+ + E
Sbjct: 204 SMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIE 263
Query: 410 GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G ++ + H+ + ++D+ + G ++EAY + +G+ V+W +++
Sbjct: 264 GKQ-VHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGF 322
Query: 470 RIHKNVDLGEIAAKKLFE--LEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
H I +K+ + P++ Y V + N ++ G E+ ++ LM
Sbjct: 323 ARHARAPEAMILFEKMQQRGFFPDDVTY-VCVLNACSHMGLHEEGQKYFDLM 373
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 20/249 (8%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP 77
K S+ + + +F +KN V +W+S++A + G EAL F + + +
Sbjct: 191 KCSSIKDASQMFESMPEKNAV-TWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMIS 249
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
A+ +C+ L L GKQ H + GF +++VSS+LIDMY+KCG + +A +F + +
Sbjct: 250 SAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLE- 308
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+R+IV W +M++G+ ++ A EA++LF++ F D V VL+A
Sbjct: 309 VRSIVLWNAMISGFARHARAPEAMILFEKM------------QQRGFFPDDVTYVCVLNA 356
Query: 198 CSRVTVNGVTEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKD 253
CS + ++ EG F V + V + +ID R G V + + + M
Sbjct: 357 CSHMGLH--EEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNAT 414
Query: 254 AVTWNSIIA 262
+ W S++A
Sbjct: 415 SSMWGSLLA 423
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/589 (40%), Positives = 343/589 (58%), Gaps = 34/589 (5%)
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDE 133
S + ++SC + GKQ H + G + +++ L+++Y C L++A LFD
Sbjct: 2 SYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDR 61
Query: 134 IPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
I +R N+ W M+ GY N A+ L+ + + D
Sbjct: 62 ISKR--NLFLWNVMIRGYAWNGPYELAISLYYQM------------RDYGLVPDKFTFPF 107
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
VL ACS ++ + H VI+ G +S+V VG LID YA+ G V+ +R+VFD + E+D
Sbjct: 108 VLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERD 167
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V WNS++A Y+QNG E+L +++ +K T + A A G+L GK +H
Sbjct: 168 VVCWNSMLATYSQNGQPDESL-ALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELH 226
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+ E + V T+++DMY K G V++AR F ++EK V SW AMI GY MH A
Sbjct: 227 GYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHAN 286
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
EALDLF +M K V P++ITFV VL+ACSH GL+ EG +M +FNI P V+HY CM
Sbjct: 287 EALDLFKEM-KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCM 345
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
+DLLG G+L+EAY LI M+V+ D VWG+LL +C+IH NV++GE+A +KL ELEP++
Sbjct: 346 IDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDG 405
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
G +V+LSN+YA AG+W+ V R R LM N+ L K+ S +E+ KVHAFL D HP+ E
Sbjct: 406 GNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSE 465
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------- 599
IY L+ ++E GY + SV HDV+ +EK + HSE+LA
Sbjct: 466 AIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKL 525
Query: 600 ----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH I+ ISK+ +REI +RD R+H+FKDG+CSCGD+W
Sbjct: 526 LIIKNLRICEDCHVAIKFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 186/349 (53%), Gaps = 19/349 (5%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
TN LF++ + K N+F WN +I A G A+ + MR L P + TFP +K+
Sbjct: 53 TNAHLLFDR-ISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKA 111
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
CSAL + GK+ H+ G DVFV +ALIDMY+KCG + AR++FD+I + R++V
Sbjct: 112 CSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDE--RDVV 169
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
W SML Y QN E+L L + + ++ FV S+A SA + +
Sbjct: 170 CWNSMLATYSQNGQPDESLALCRVMAFN------GLKPTEGTFVISIAA----SADNGLL 219
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
G + HG+ + GF+S V L+D YA+ G V+V+R +F+ + EK V+WN++I
Sbjct: 220 PQG--KELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMIT 277
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC-IHDQVIKMDL 321
YA +G A EALD+F +M V + +T VL A +H G+L GK + ++
Sbjct: 278 GYAMHGHANEALDLFKEM--KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNI 335
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+V T +ID+ CG+++ A K +M+ E + W A++ +H
Sbjct: 336 WPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIH 384
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
V + + ++ S + N+ + +++ V SWN++I A G + EAL F M K
Sbjct: 240 VKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGK 298
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI--FGFHRDVFVSSALIDMYSKCGELSD 126
+ P TF + +CS L+ GK H ++ I F V + +ID+ CG L +
Sbjct: 299 VLPDHITFVGVLAACSHGGLLNEGKM-HFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEE 357
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
A KL E+ V W ++L + N L ++ + E + GG
Sbjct: 358 AYKLIMEMRVEPDAGV-WGALLHSCKIHGNVEMGELALEKLVELEPDDGG 406
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/609 (40%), Positives = 349/609 (57%), Gaps = 41/609 (6%)
Query: 62 SSMRKLSLTPTRSTFPCA-------IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSAL 114
+S S P ++ P A ++SC A L +G+Q H + + G D +S+ L
Sbjct: 44 ASPPPPSTNPRLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKL 103
Query: 115 IDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESEC 174
+D+Y+ CG++ AR+LFD +P+R N+ W ++ Y + + REA + ++E
Sbjct: 104 VDLYAACGQVGHARRLFDGMPKR--NVFLWNVLIRAYAR-EGPREAAVRLYRGMVEH--- 157
Query: 175 GGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYA 234
V D+ VL AC+ + H V + +V V ++D YA
Sbjct: 158 --------GVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYA 209
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
+ G VD +R VFDG+ +DAV WNS+IA Y QNG EAL + M + + TL
Sbjct: 210 KCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMA-ANGIGPTIATLV 268
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
+ + A A L G+ +H + + TS++DMY K G V +AR F Q+ ++
Sbjct: 269 SAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKR 328
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
+ SW AMI GYGMH A EAL LF KM A V P+ ITFV VLSAC+H G+V+E +
Sbjct: 329 ELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEF 388
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
M + ++I+P V+HY C++D+LG G+ +EAYDLI+GM ++ D +WG+LL C+IHK
Sbjct: 389 FYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHK 448
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
NV+LGE+A +KL ELEP + G +V LSNIYA +G+WE R R LM NR L K S +
Sbjct: 449 NVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWI 508
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
EL+GK H FLVGD HP+ ++IY LE L + + GYV D+ V H+VD +EK +R
Sbjct: 509 ELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYVPDIIPVFHNVDDDEKRNMVRS 568
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSE+LA NLRVC DCH VI+LIS++V REI++RD R+H+F +
Sbjct: 569 HSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVN 628
Query: 636 GLCSCGDYW 644
G CSC DYW
Sbjct: 629 GECSCKDYW 637
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 174/339 (51%), Gaps = 16/339 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K NVF WN +I AR G A+R + M + + P T+P +K+C+AL DL +G
Sbjct: 123 MPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETG 182
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ HQ+ + +DVFV + ++DMY+KCG + DAR +FD I +R+ V W SM+ Y
Sbjct: 183 REVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGI--AVRDAVVWNSMIAAYG 240
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN EAL L C + N + ++ A +A + G HG
Sbjct: 241 QNGRPMEALAL----------CRDMAANGIGPTIATLVSAVSAAADAAALPRG--RELHG 288
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
F +RGF + + +L+D YA+ G V V+R +F+ +++++ V+WN++I Y +G A E
Sbjct: 289 FGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADE 348
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK-CIHDQVIKMDLEESVIVGTSI 331
AL +F++M V + +T VL A H G++ K + V ++ +V T +
Sbjct: 349 ALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCV 408
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
ID+ G+ + A M E + W A++ G +H
Sbjct: 409 IDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIH 447
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/634 (38%), Positives = 365/634 (57%), Gaps = 43/634 (6%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS---LTPTRSTFPCAIKSCSALHDLHS 91
K + +WN++IA +R GD AL+ + M S + P TF A+ +CS + D+
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G++ + G+ D V +ALI+MYSKCG L ARK+FD + R ++++W +M++GY
Sbjct: 182 GREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNR--DVIAWNTMISGY 239
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+ A +AL LF+ G ++ NV V +L+AC+ + H
Sbjct: 240 AKQGAATQALELFQRM--------GPNDPKPNV----VTFIGLLTACTNLEDLEQGRAIH 287
Query: 212 GFVIKRGFDSEVGVGNTLIDAYAR-GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
V + G++S++ +GN L++ Y + ++ +R+VF+ + +D +TWN +I Y Q G A
Sbjct: 288 RKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQA 347
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+ALD+F QM + +V N +TLS VL A A LG R GK +H + + V++ S
Sbjct: 348 KDALDIFKQM-QLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENS 406
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+++MY +CG +D F +++K++ SW+ +IA Y H +R L+ F+++++ G+ +
Sbjct: 407 LMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAAD 466
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+T VS LSACSH G+++EG +M + + P H+ CMVDLL RAG+L+ A +LI
Sbjct: 467 DVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLI 526
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV-LLSNIYANAGRW 509
M D V W SLL C++H + A KLFELE + V LLSN+YA AGRW
Sbjct: 527 HDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRW 586
Query: 510 EDVERTRSLMKNRRLA-KTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
+DV +TR NRR A K PG S +E+ VH F+ GDK HP+ E I ++ L+ ++++
Sbjct: 587 DDVRKTR----NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKD 642
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
GYV DM V+H+V +EEKE L HSEKLA NLR C DCH
Sbjct: 643 AGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAA 702
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ IS++V R+IVVRDS RFH+F++G CSC DYW
Sbjct: 703 AKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 137/454 (30%), Positives = 242/454 (53%), Gaps = 28/454 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++ N SW ++A AR G EAL + M L P + F AI CS+ DL G
Sbjct: 18 IEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQG 77
Query: 93 KQAHQ---QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
+ H + + F D+ + +ALI MY++C +L ARK FDE+ + + +V+W +++
Sbjct: 78 QLLHAMILETQLLEF--DIILGTALITMYARCRDLELARKTFDEMGK--KTLVTWNALIA 133
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
GY +N + R AL ++++ + S++ + + D++ +S L ACS V +++G
Sbjct: 134 GYSRNGDHRGALKIYQDMV---------SKSPEGMKPDAITFSSALYACS--VVGDISQG 182
Query: 210 --AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ G+ S+ V N LI+ Y++ G ++ +RKVFD + +D + WN++I+ YA+
Sbjct: 183 REIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQ 242
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A +AL++F +M D K N VT +L A +L L G+ IH +V + E +++
Sbjct: 243 GAATQALELFQRM-GPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVI 301
Query: 328 GTSIIDMYCKC-GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
G +++MY KC ++ AR+ F +++ ++V +W +I Y + +A++ALD+F +M
Sbjct: 302 GNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLEN 361
Query: 387 VRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
V PN IT +VLSAC+ G ++G H L G + V ++++ R G L
Sbjct: 362 VAPNEITLSNVLSACAVLGAKRQGKAVHALIASG---RCKADVVLENSLMNMYNRCGSLD 418
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
+ + ++ K+ V W +L+ A H + G
Sbjct: 419 DTVGVFAAIRDKS-LVSWSTLIAAYAQHGHSRTG 451
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 194/359 (54%), Gaps = 26/359 (7%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY KCG ++DA +F I N VSWT ++ + +N + REAL ++ +LE G
Sbjct: 1 MYGKCGSVADALAVFHAIEHP--NSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDG 58
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK-RGFDSEVGVGNTLIDAYAR 235
A +FV ++ + CS + H +++ + + ++ +G LI YAR
Sbjct: 59 A------MFVVAIGV------CSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYAR 106
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD--VKCNAVTL 293
++++RK FD M +K VTWN++IA Y++NG AL ++ MV + +K +A+T
Sbjct: 107 CRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITF 166
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
S+ L A + +G + G+ I + + IV ++I+MY KCG ++ ARK F+++K
Sbjct: 167 SSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKN 226
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG--- 410
++V +W MI+GY A +AL+LF +M +PN +TF+ +L+AC++ +++G
Sbjct: 227 RDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAI 286
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGR-AGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ G+E ++ G ++++ + + L+EA + E ++ + D + W L+ A
Sbjct: 287 HRKVKEHGYESDLVIG----NVLLNMYTKCSSSLEEARQVFERLRTR-DVITWNILIVA 340
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/548 (40%), Positives = 337/548 (61%), Gaps = 35/548 (6%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY+KCG D RK+FDE+ +++V WT+M+T Y Q + EAL+LFK+ EE
Sbjct: 1 MYAKCGLFVDCRKIFDEM--STKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEG---- 54
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
+ DS+A+ SV SA ++ HG+ ++ E+ VGN+++ + +
Sbjct: 55 -------LLADSIAVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKC 107
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G+ + +R VFD M+E+D ++WNS+++ Y QNG A EAL +FD+M + +D + VT +
Sbjct: 108 GNTEKARLVFDMMMERDVISWNSMLSGYTQNGQATEALLLFDEM-RDSDCQPTPVTALIM 166
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK--EK 354
+ A A+LG LG+ HD ++ +E + +++DMY KCG ++ A FN + E+
Sbjct: 167 VSACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTER 226
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
N SW +I+GYGMH +EAL+LF +M + GV PN+ TF S+LSACSHAGL+ EG
Sbjct: 227 NAGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCF 286
Query: 415 NTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
M ++ +H+ C+VD+LGRAG L+EA+DLI+ M VWG+LL AC+IH N
Sbjct: 287 AEM-KRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGN 345
Query: 475 VDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVE 534
++LG+ AA L +LEPN+ GY+VL+SNIYA + +W++V + R MKN+ L K FS++E
Sbjct: 346 MELGKTAASNLLQLEPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIE 405
Query: 535 LRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIH 594
+ F D+E+P ++Y+ +E L ++++ GYV D++ +HDV++E+KE L H
Sbjct: 406 YGKDILGFHTADQENPYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYH 465
Query: 595 SEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDG 636
SEKLA NLRVC DCH+ + IS + R+I+VRD+ RFH+F+ G
Sbjct: 466 SEKLAVAFGVLKIDPGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGG 525
Query: 637 LCSCGDYW 644
CSC DYW
Sbjct: 526 TCSCKDYW 533
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 125/304 (41%), Gaps = 57/304 (18%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
NT L + + +V SWNS+++ + G + EAL F MR PT T +
Sbjct: 109 NTEKARLVFDMMMERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVS 168
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI 141
+C+ L H G++ H D +S+AL+DMY+KCG+L A LF+ IP RN
Sbjct: 169 ACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNA 228
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
SW +++GY + + +EAL LF + V + S+LSACS
Sbjct: 229 GSWNVLISGYGMHGHGKEALELFSRM------------QEEGVEPNHFTFTSILSACS-- 274
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS-- 259
G +D RK F M ++ +VT
Sbjct: 275 ---------------------------------HAGLIDEGRKCFAEM-KRLSVTLEDKH 300
Query: 260 ---IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
++ + + GL EA D+ +M + A+LLA G + LGK +
Sbjct: 301 HACVVDMLGRAGLLQEAFDLIKEMPSPP----SDGVWGALLLACKIHGNMELGKTAASNL 356
Query: 317 IKMD 320
++++
Sbjct: 357 LQLE 360
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 249/693 (35%), Positives = 354/693 (51%), Gaps = 93/693 (13%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + SW ++ L R G EA++ M TPT+ T + SC+ G
Sbjct: 124 MPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVG 183
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI-------------- 138
++ H G V V++++++MY KCG+ A +F+ +P R
Sbjct: 184 RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHL 243
Query: 139 ---------------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
R+IVSW +M+ GY QN +AL LF L E S
Sbjct: 244 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESS----------- 292
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ D I SVLSAC+ + + + H ++++ V N LI YA+ G V+ +R
Sbjct: 293 MAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENAR 352
Query: 244 KVFDGMIE---------------------------------KDAVTWNSIIAIYAQNGLA 270
++ D +E +D V W ++I Y QNG
Sbjct: 353 RIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRN 412
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA+D+F M+ + + N+ TL+AVL A L L GK IH + I+ LE+S V +
Sbjct: 413 DEAIDLFRSMI-TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNA 471
Query: 331 IIDMYCKCGQVDLARKAFNQM-KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
II MY + G AR+ F+Q+ K +WT+MI H + EA+ LF +M++AGV P
Sbjct: 472 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 531
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ IT+V VLSACSHAG V EG + + + +E I P + HY CMVDLL RAG EA +
Sbjct: 532 DRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEF 591
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I M V+ D + WGSLL ACR+HKN +L E+AA+KL ++PNN G + ++N+Y+ GRW
Sbjct: 592 IRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRW 651
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
D R K + + K GFS +R K+H F D HPQ + +Y + +++
Sbjct: 652 SDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGA 711
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
G+V D+ SV+HDVD E KE L HSEKLA NLRVC DCH I
Sbjct: 712 GFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAI 771
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ ISKV DREI+VRD+ RFH+F+DGLCSC DYW
Sbjct: 772 KAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 217/465 (46%), Gaps = 89/465 (19%)
Query: 106 RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
R+VF ++L+ M++K G L+DAR +F E+P+R + VSWT M+ G + EA+
Sbjct: 96 RNVFTWNSLLSMFAKSGRLADARGVFAEMPER--DAVSWTVMVVGLNRAGRFGEAI---- 149
Query: 166 EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGV 225
+ LL+ + +D + +VLS+C+ V H FV+K G S V V
Sbjct: 150 KTLLDMT--------ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPV 201
Query: 226 GNTLIDAYARG-------------------------------GHVDVSRKVFDGMIEKDA 254
N++++ Y + G +D++ +F+ M ++
Sbjct: 202 ANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSI 261
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
V+WN++IA Y QNGL A+AL +F +M+ + + + T+++VL A A+LG +R+GK +H
Sbjct: 262 VSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHA 321
Query: 315 QVIK---------------------------------MDLEESVIVGTSIIDMYCKCGQV 341
+++ M+ + +VI T++++ Y K G +
Sbjct: 322 YILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDM 381
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ AR+ F M ++V +WTAMI GY + R EA+DLF MI G PN T +VLS C
Sbjct: 382 ESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVC 441
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+ + G ++ +E ++ + R+G A + + + + + +
Sbjct: 442 ASLACLDYGKQ-IHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT 500
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLS 500
W S++ A H GE A LFE +EP+ Y +LS
Sbjct: 501 WTSMIVALAQHGQ---GE-EAVGLFEEMLRAGVEPDRITYVGVLS 541
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 206/441 (46%), Gaps = 57/441 (12%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLT-TLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
M + SS +++VS ++ H +L +LF D++ + SWN++IA + G +AL+
Sbjct: 225 MPVRSVSSWNAMVS-LNTHLGRMDLAESLFESMPDRS-IVSWNAMIAGYNQNGLDAKALK 282
Query: 60 AFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMY 118
FS M + S+ P T + +C+ L ++ GKQ H + V++ALI Y
Sbjct: 283 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 342
Query: 119 SKCGELSDARKLFDEIPQ-------------------------------RIRNIVSWTSM 147
+K G + +AR++ D+ + R++V+WT+M
Sbjct: 343 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAM 402
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY QN EA+ LF+ + CG +S +A+VLS C+ +
Sbjct: 403 IVGYEQNGRNDEAIDLFRSMI----TCGPEP--------NSYTLAAVLSVCASLACLDYG 450
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQ 266
+ H I+ + V N +I YAR G +R++FD + K+ +TW S+I AQ
Sbjct: 451 KQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQ 510
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESV 325
+G EA+ +F++M+++ V+ + +T VL A +H G + GK +DQ+ + + +
Sbjct: 511 HGQGEEAVGLFEEMLRA-GVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEM 569
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
++D+ + G A++ +M E + +W ++++ +H A A K++
Sbjct: 570 SHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLS 629
Query: 385 AGVRPN----YITFVSVLSAC 401
+ PN Y +V SAC
Sbjct: 630 --IDPNNSGAYSAIANVYSAC 648
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 3 LSKSSSVS-SVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
L +SSSVS ++++ + + +F++ + +W S+I LA+ G EA+ F
Sbjct: 462 LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 521
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHR---DVFVSSALIDMY 118
M + + P R T+ + +CS ++ GK+ + Q I H+ ++ + ++D+
Sbjct: 522 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQ--IKNEHQIAPEMSHYACMVDLL 579
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
++ G S+A++ +P + ++W S+L+ + NA A L ++ L + GA
Sbjct: 580 ARAGLFSEAQEFIRRMPVE-PDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAY 638
Query: 179 ENSDNVFVDSVAIASVLSACSR 200
AIA+V SAC R
Sbjct: 639 S----------AIANVYSACGR 650
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/630 (36%), Positives = 357/630 (56%), Gaps = 33/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ ++ SW +IA A EAL FS MR P TF +K+C L + +G
Sbjct: 107 ISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAG 166
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K H + RD++V L+++Y++CG+ DA + F ++P+ +++ W+ M++ +
Sbjct: 167 KTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKN--DVIPWSFMISRFA 224
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+ + +AL +F + V + +SVL A + + +++ HG
Sbjct: 225 QSGQSEKALEIFCQM------------RRAFVIPNQFTFSSVLQASADIESLDLSKTIHG 272
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+K G ++V V N L+ YA+ G ++ S ++F+ + +++ V+WN+II Y Q G
Sbjct: 273 HALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGER 332
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL +F M++ V+ VT S++L A A L L LG +H K + V VG ++I
Sbjct: 333 ALSLFSNMLR-YQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALI 391
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG + AR F+ + ++ SW A+I GY MH EA+ +F M + +P+ +
Sbjct: 392 DMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDEL 451
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TFV VLSACS+ G + EG + +M ++ IEP +EHY CMV L+GR+G L +A IE
Sbjct: 452 TFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIED 511
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
+ + ++W +LLGAC IH +V+LG I+A+++ ELEP + HVLLSNIYA A RW +V
Sbjct: 512 IPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNV 571
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R MK + + K PG S +E +G VH F V D H + I LE LN+K ++ GY
Sbjct: 572 AYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYS 631
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
+ +V+ DV+ +EKE L +HSE+LA NLR+C DCH+VI+LI
Sbjct: 632 PQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLI 691
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+V R+I+VRD RFH+F++G CSC DYW
Sbjct: 692 SKIVGRDIIVRDMNRFHHFENGSCSCADYW 721
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 241/500 (48%), Gaps = 29/500 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ ++N V S+ ++I A+ +EA F+ + F +K ++
Sbjct: 2 VFDEMPERNTV-SFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H G+ + F+ +ALID YS G +S AR++FDEI +++VSWT M
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISS--KDMVSWTGM 118
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y +ND EAL F + G N + A VL AC +
Sbjct: 119 IASYAENDCFSEALEFFSQM-----RVAGFKPN-------NFTFAGVLKACLGLQNFDAG 166
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H V+K ++ ++ VG L++ Y R G D + + F M + D + W+ +I+ +AQ+
Sbjct: 167 KTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQS 226
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G + +AL++F QM ++ + N T S+VL A A + L L K IH +K L V V
Sbjct: 227 GQSEKALEIFCQMRRAFVIP-NQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFV 285
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+++ Y KCG ++ + + F + ++N SW +I Y AL LF M++ V
Sbjct: 286 SNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQV 345
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+ +T+ S+L AC+ ++ G ++ + + V ++D+ + G +K+A
Sbjct: 346 QATEVTYSSILRACATLAALELGLQ-VHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDAR 404
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL------EPNNCGYHVLLSN 501
+ + + ++ D V W +++ +H LG + A K+F L +P+ + +LS
Sbjct: 405 FMFDMLDLR-DKVSWNAIICGYSMH---GLG-VEAIKMFNLMKETKCKPDELTFVGVLSA 459
Query: 502 IYANAGRWEDVERTRSLMKN 521
+N GR ++ ++ + MK
Sbjct: 460 C-SNTGRLDEGKQYFTSMKQ 478
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/634 (38%), Positives = 365/634 (57%), Gaps = 43/634 (6%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS---LTPTRSTFPCAIKSCSALHDLHS 91
K + +WN++IA +R GD AL+ + M S + P TF A+ +C+ + D+
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQ 181
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G++ + G+ D V +ALI+MYSKCG L ARK+FD + R ++++W +M++GY
Sbjct: 182 GREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNR--DVIAWNTMISGY 239
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+ A +AL LF+ G ++ NV V +L+AC+ + H
Sbjct: 240 AKQGAATQALELFQRM--------GPNDPKPNV----VTFIGLLTACTNLEDLEQGRAIH 287
Query: 212 GFVIKRGFDSEVGVGNTLIDAYAR-GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
V + G++S++ +GN L++ Y + ++ +R+VF+ M +D +TWN +I Y Q G A
Sbjct: 288 RKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQA 347
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+ALD+F QM + +V N +TLS VL A A LG R GK +H + + V++ S
Sbjct: 348 KDALDIFKQM-QLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENS 406
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+++MY +CG +D F +++K++ SW+ +IA Y H +R L+ F+++++ G+ +
Sbjct: 407 LMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAAD 466
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+T VS LSACSH G+++EG +M + + P H+ CMVDLL RAG+L+ A +LI
Sbjct: 467 DVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLI 526
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV-LLSNIYANAGRW 509
M D V W SLL C++H + A KLFELE + V LLSN+YA AGRW
Sbjct: 527 HDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRW 586
Query: 510 EDVERTRSLMKNRRLA-KTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
+DV +TR NRR A K PG S +E+ VH F+ GDK HP+ E I ++ L+ ++++
Sbjct: 587 DDVRKTR----NRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKD 642
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
GYV DM V+H+V +EEKE L HSEKLA NLR C DCH
Sbjct: 643 AGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAA 702
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ IS++V R+IVVRDS RFH+F++G CSC DYW
Sbjct: 703 AKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 137/454 (30%), Positives = 242/454 (53%), Gaps = 28/454 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++ N SW ++A AR G EAL + M L P + F AI CS+ DL G
Sbjct: 18 IEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQG 77
Query: 93 KQAHQ---QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
+ H + + F D+ + +ALI MY++C +L ARK FDE+ + + +V+W +++
Sbjct: 78 QLLHAMILETRLLEF--DIILGTALITMYARCRDLELARKTFDEMGK--KTLVTWNALIA 133
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
GY +N + R AL ++++ + S++ + + D++ +S L AC+ V +++G
Sbjct: 134 GYSRNGDHRGALKIYQDMV---------SKSPEGMKPDAITFSSALYACT--VVGDISQG 182
Query: 210 --AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ G+ S+ V N LI+ Y++ G ++ +RKVFD + +D + WN++I+ YA+
Sbjct: 183 REIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQ 242
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A +AL++F +M D K N VT +L A +L L G+ IH +V + E +++
Sbjct: 243 GAATQALELFQRM-GPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVI 301
Query: 328 GTSIIDMYCKC-GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
G +++MY KC ++ AR+ F +M+ ++V +W +I Y + +A++ALD+F +M
Sbjct: 302 GNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLEN 361
Query: 387 VRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
V PN IT +VLSAC+ G ++G H L G + V ++++ R G L
Sbjct: 362 VAPNEITLSNVLSACAVLGAKRQGKAVHALIASG---RCKADVVLENSLMNMYNRCGSLD 418
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
+ + ++ K+ V W +L+ A H + G
Sbjct: 419 DTVGVFAAIRDKS-LVSWSTLIAAYAQHGHSRTG 451
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 193/359 (53%), Gaps = 26/359 (7%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY KCG ++DA +F I N VSWT ++ + +N + REAL ++ +LE G
Sbjct: 1 MYGKCGSVADALAVFHAIEHP--NSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDG 58
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK-RGFDSEVGVGNTLIDAYAR 235
A +FV ++ + CS + H +++ R + ++ +G LI YAR
Sbjct: 59 A------MFVVAIGV------CSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYAR 106
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD--VKCNAVTL 293
++++RK FD M +K VTWN++IA Y++NG AL ++ MV + +K +A+T
Sbjct: 107 CRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITF 166
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
S+ L A +G + G+ I + + IV ++I+MY KCG ++ ARK F+++K
Sbjct: 167 SSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKN 226
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG--- 410
++V +W MI+GY A +AL+LF +M +PN +TF+ +L+AC++ +++G
Sbjct: 227 RDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAI 286
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGR-AGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ G+E ++ G ++++ + + L+EA + E M+ + D + W L+ A
Sbjct: 287 HRKVREDGYESDLVIG----NVLLNMYTKCSSSLEEARQVFERMRTR-DVITWNILIVA 340
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 252/635 (39%), Positives = 371/635 (58%), Gaps = 41/635 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N SW ++++ L++ +AL AF++MR+ + PTR A ++ +AL G
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H GF ++FV+S L DMYSKCG LS+A ++FD++PQ+ + V+WT+M+ GY
Sbjct: 61 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQK--DAVAWTAMIDGYA 118
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+N + A+L F++ E G +VF SVLSA + +++ H
Sbjct: 119 KNGSLEAAVLSFRDMKRE-----GLVGADQHVF------CSVLSASGGLKDGWLSKSIHC 167
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN-----SIIAIYAQN 267
V K GF+ EV V N LID YA+ V+ + +V ++ D WN S+I Y +
Sbjct: 168 CVTKAGFELEVAVRNALIDMYAKSMDVESASRV----LKIDPGGWNVVSGTSMIDGYIET 223
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
EAL ++ ++ + V+ N T S+++ A +L G +H QVIK DL V
Sbjct: 224 DCVEEALVIYVEL-RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFV 282
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G++++DMY KCG + L+ + FN+++ + +W A+I + H REA+ F +MI +G+
Sbjct: 283 GSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGI 342
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
RPN+I FVS+L+ACSHAGLV EG + +M IEP EHY C++D GRAG+L EAY
Sbjct: 343 RPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAY 402
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I M +K + W SLLGACR+ + +LGE+AA+ L +LEP N G HV LS IYA+ G
Sbjct: 403 KFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLG 462
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+WEDV+ R LM++ R+ K PGFS V+ K H F D HPQ + IYE LEEL +++
Sbjct: 463 QWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIK 522
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E GY+ D + + +++ KE LR HSE++A NLR+C DCHT
Sbjct: 523 EEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHT 582
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ I KV R+I+VRD+ RFH+F +G CSCGDYW
Sbjct: 583 AFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 617
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 254/716 (35%), Positives = 364/716 (50%), Gaps = 94/716 (13%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S++S K + +F + +++ V SW ++ L R G EA++ M
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAV-SWTVMVVGLNRAGRFGEAIKTLLDMTADGF 160
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
TPT+ T + SC+ G++ H G V V++++++MY KCG+ A
Sbjct: 161 TPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETAST 220
Query: 130 LFDEIPQRI-----------------------------RNIVSWTSMLTGYVQNDNAREA 160
+F+ +P R R+IVSW +M+ GY QN +A
Sbjct: 221 VFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKA 280
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
L LF L E S + D I SVLSAC+ + + + H ++++
Sbjct: 281 LKLFSRMLHESS-----------MAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMA 329
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIE----------------------------- 251
V N LI YA+ G V+ +R++ D +E
Sbjct: 330 YNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFG 389
Query: 252 ----KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+D V W ++I Y QNG EA+D+F M+ + + N+ TL+AVL A L L
Sbjct: 390 VMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI-TCGPEPNSYTLAAVLSVCASLACLD 448
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM-KEKNVRSWTAMIAGY 366
GK IH + I+ LE S V +II MY + G AR+ F+Q+ K +WT+MI
Sbjct: 449 YGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVAL 508
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
H + EA+ LF +M++AGV P+ IT+V VLSACSHAG V EG + + + +E I P
Sbjct: 509 AQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPE 568
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
+ HY CMVDLL RAG EA + I M V+ D + WGSLL ACR+HKN +L E+AA+KL
Sbjct: 569 MSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLL 628
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
++PNN G + ++N+Y+ GRW D R K + + K GFS +R K+H F D
Sbjct: 629 SIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADD 688
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
HPQ + +Y + +++ G+V D+ SV+HDVD E KE L HSEKLA
Sbjct: 689 VVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLIS 748
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH I+ ISKV DREI+VRD+ RFH+F+DGLCSC DYW
Sbjct: 749 TPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 216/465 (46%), Gaps = 89/465 (19%)
Query: 106 RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
R+VF ++L+ M++K G L+DAR +F E+P+R + VSWT M+ G + EA+
Sbjct: 96 RNVFTWNSLLSMFAKSGRLADARGVFAEMPER--DAVSWTVMVVGLNRAGRFGEAI---- 149
Query: 166 EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGV 225
+ LL+ + +D + +VLS+C+ V H FV+K G S V V
Sbjct: 150 KTLLDMT--------ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPV 201
Query: 226 GNTLIDAYARG-------------------------------GHVDVSRKVFDGMIEKDA 254
N++++ Y + G +D++ +F+ M +
Sbjct: 202 ANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSI 261
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
V+WN++IA Y QNGL A+AL +F +M+ + + + T+++VL A A+LG +R+GK +H
Sbjct: 262 VSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHA 321
Query: 315 QVIK---------------------------------MDLEESVIVGTSIIDMYCKCGQV 341
+++ M+ + +VI T++++ Y K G +
Sbjct: 322 YILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDM 381
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ AR+ F M ++V +WTAMI GY + R EA+DLF MI G PN T +VLS C
Sbjct: 382 ESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVC 441
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+ + G ++ +E ++ + R+G A + + + + + +
Sbjct: 442 ASLACLDYGKQ-IHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT 500
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLS 500
W S++ A H GE A LFE +EP+ Y +LS
Sbjct: 501 WTSMIVALAQHGQ---GE-EAVGLFEEMLRAGVEPDRITYVGVLS 541
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 203/440 (46%), Gaps = 55/440 (12%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M + SS +++VS ++ H +L + + ++ SWN++IA + G +AL+
Sbjct: 225 MPVRSVSSWNAMVS-LNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKL 283
Query: 61 FSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
FS M + S+ P T + +C+ L ++ GKQ H + V++ALI Y+
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 343
Query: 120 KCGELSDARKLFDEIPQ-------------------------------RIRNIVSWTSML 148
K G + +AR++ D+ + R++V+WT+M+
Sbjct: 344 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 403
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
GY QN EA+ LF+ + CG +S +A+VLS C+ + +
Sbjct: 404 VGYEQNGRNDEAIDLFRSMI----TCGPEP--------NSYTLAAVLSVCASLACLDYGK 451
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQN 267
H I+ + V N +I YAR G +R++FD + K+ +TW S+I AQ+
Sbjct: 452 QIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 511
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESVI 326
G EA+ +F++M+++ V+ + +T VL A +H G + GK +DQ+ + + +
Sbjct: 512 GQGEEAVGLFEEMLRA-GVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMS 570
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
++D+ + G A++ +M E + +W ++++ +H A A K++
Sbjct: 571 HYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLS- 629
Query: 386 GVRPN----YITFVSVLSAC 401
+ PN Y +V SAC
Sbjct: 630 -IDPNNSGAYSAIANVYSAC 648
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 3 LSKSSSVS-SVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
L +SSSVS ++++ + + +F++ + +W S+I LA+ G EA+ F
Sbjct: 462 LERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 521
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHR---DVFVSSALIDMY 118
M + + P R T+ + +CS ++ GK+ + Q I H+ ++ + ++D+
Sbjct: 522 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQ--IKNEHQIAPEMSHYACMVDLL 579
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
++ G S+A++ +P + ++W S+L+ + NA A L ++ L + GA
Sbjct: 580 ARAGLFSEAQEFIRRMPVE-PDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAY 638
Query: 179 ENSDNVFVDSVAIASVLSACSR 200
AIA+V SAC R
Sbjct: 639 S----------AIANVYSACGR 650
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/591 (40%), Positives = 344/591 (58%), Gaps = 68/591 (11%)
Query: 107 DVFVSSALI----DMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
DVF +S LI D S + A ++F +I N+ + +M+ G+ + N +A
Sbjct: 48 DVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNP--NLFIFNAMIRGHSGSKNPDQAF- 104
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE 222
F ++ G + D++ ++ +C+++ + AHG +IK GF+ +
Sbjct: 105 ---HFYVQSQRQG--------LLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKD 153
Query: 223 VGVGNTLIDAYA---------------------------RG----GHVDVSRKVFDGMIE 251
V V N+L+ YA RG G V+ +RK+FD M E
Sbjct: 154 VYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPE 213
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
K+ VTW+++I+ YAQN +A+++F ++++S V+ N + +V+ + AHLG L LG+
Sbjct: 214 KNLVTWSTMISGYAQNNHFDKAVELF-KVLQSQGVRANETVMVSVISSCAHLGALELGER 272
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
HD V+K + ++I+GT+++DMY +CG +D A F + E++ SWTA+IAG MH
Sbjct: 273 AHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGY 332
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
+ +L F M++AG+ P ITF +VLSACSH GLV+ G+ +M + +EP +EHYG
Sbjct: 333 SERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYG 392
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPN 491
CMVDLLGRAGKL+EA + M VK + VWG+LLGACRIHKN ++GE K L +L P
Sbjct: 393 CMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQ 452
Query: 492 NCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQ 551
+ GY+VLLSNIYANA WE V R +MK + L K PG SL+EL G+VH F +GD HP+
Sbjct: 453 HSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPE 512
Query: 552 HEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------ 599
+KI EE+ ++++ GY + + D+D+EEKE L HSEKLA
Sbjct: 513 MDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEAGT 572
Query: 600 ------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT +LISKV RE++VRD RFH+F+ GLCSC DYW
Sbjct: 573 PIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 188/374 (50%), Gaps = 50/374 (13%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ N+F +N++I + + +A + ++ L P TFP +KSC+ LH + G
Sbjct: 79 IQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMG 138
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYS-------------------------------KC 121
QAH GF +DV+V ++L+ MY+ KC
Sbjct: 139 SQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKC 198
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G++ ARKLFD++P+ +N+V+W++M++GY QN++ +A+ LFK S
Sbjct: 199 GDVESARKLFDQMPE--KNLVTWSTMISGYAQNNHFDKAVELFKVL------------QS 244
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
V + + SV+S+C+ + + E AH +V+K G + +G L+D YAR G +D
Sbjct: 245 QGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDK 304
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ VF+ + E+D ++W ++IA A +G + +L F MV++ + +T +AVL A +
Sbjct: 305 AVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEA-GLTPRDITFTAVLSACS 363
Query: 302 HLGVLRLGKCIHDQVIKMD--LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRS 358
H G++ G I + +K D +E + ++D+ + G+++ A + +M K N
Sbjct: 364 HGGLVERGFQIFES-MKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPV 422
Query: 359 WTAMIAGYGMHCRA 372
W A++ +H A
Sbjct: 423 WGALLGACRIHKNA 436
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 133/317 (41%), Gaps = 49/317 (15%)
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI----DAYARGGHVDVSRKVFDGMI 250
L CS +T + H ++I+ +V + LI D + +D + ++F +
Sbjct: 24 LETCSDLTHLKII---HAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQ 80
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+ +N++I ++ + +A + Q + + N +T ++ + L + +G
Sbjct: 81 NPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDN-LTFPFLVKSCTKLHCISMGS 139
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA--------- 361
H +IK E+ V V S++ MY G + A F +M +V SWT+
Sbjct: 140 QAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCG 199
Query: 362 ----------------------MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
MI+GY + +A++LF + GVR N VSV+S
Sbjct: 200 DVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVIS 259
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKV 455
+C+H G ++ L H++ ++ G+ +VD+ R G + +A + E +
Sbjct: 260 SCAHLGALE-----LGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPE 314
Query: 456 KADFVVWGSLLGACRIH 472
+ D + W +L+ +H
Sbjct: 315 R-DTLSWTALIAGLAMH 330
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 18/189 (9%)
Query: 310 KCIHDQVIKMDLEESVIVGTSII----DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
K IH +I+ + V + +I D +D A + F+Q++ N+ + AMI G
Sbjct: 34 KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRG 93
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
+ +A + + + G+ P+ +TF ++ +C+ + G + H I+
Sbjct: 94 HSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMG-----SQAHGHIIKH 148
Query: 426 GVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
G E +V + G EA LI D V W S++ +V+ +
Sbjct: 149 GFEKDVYVQNSLVHMYATFGD-TEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVE----S 203
Query: 482 AKKLFELEP 490
A+KLF+ P
Sbjct: 204 ARKLFDQMP 212
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/672 (36%), Positives = 375/672 (55%), Gaps = 85/672 (12%)
Query: 11 SVVSNVDKHS-TNTNLTTLFNKYVD---KNNVFSWNSVIADLARGGDSVEALRAFSSMRK 66
SV NV S N L +L Y D + + SWN ++A R G EA F+S
Sbjct: 6 SVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS--- 62
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
R+ + DV +AL+ Y + G++S+
Sbjct: 63 ------RTEW------------------------------DVISWNALMSGYVQWGKMSE 86
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF-----KEFLLEESECGGASENS 181
AR+LFD +P R++VSW M++GY + + EA LF ++ + G ++N
Sbjct: 87 ARELFDRMPG--RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQN- 143
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS-----------EVGVGNTLI 230
+ ++ + + + V+ N + ++ +R D V NT++
Sbjct: 144 -GMLEEARRVFDAMPERNAVSWNAMVA---AYIQRRMMDEAKELFNMMPCRNVASWNTML 199
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
YA+ G ++ ++ VFD M +KDAV+W +++A Y+Q G + E L +F +M + + N
Sbjct: 200 TGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW-VNR 258
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
+ VL A + L G +H ++I+ VG +++ MY KCG ++ AR AF +
Sbjct: 259 SAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEE 318
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
M+E++V SW MIAGY H +EAL++F M +P+ IT V VL+ACSH+GLV++G
Sbjct: 319 MEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKG 378
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
+ +M H+F + EHY CM+DLLGRAG+L EA+DL++ M + D +WG+LLGA R
Sbjct: 379 ISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASR 438
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
IH+N +LG AA+K+FELEP N G +VLLSNIYA++G+W D + R +M+ R + K PGF
Sbjct: 439 IHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGF 498
Query: 531 SLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMT 590
S +E++ KVH F GD HP+ EKIY +LE+L++++++ GYV+ V+HDV++EEKE
Sbjct: 499 SWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHM 558
Query: 591 LRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHY 632
L+ HSEKLA NLRVCGDCH + IS + R I++RDS RFH+
Sbjct: 559 LKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHH 618
Query: 633 FKDGLCSCGDYW 644
F+ G CSCGDYW
Sbjct: 619 FRGGSCSCGDYW 630
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/641 (36%), Positives = 360/641 (56%), Gaps = 81/641 (12%)
Query: 28 LFNKYVDKNN-VFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
LF + V ++ +F NS+I + G EA+ + M L +TP TFP + C+ +
Sbjct: 85 LFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKI 144
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
G Q H G DVF+ + LI Y++CG + K+F+ + +R N+VSWTS
Sbjct: 145 AAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSER--NVVSWTS 202
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ GY + D +EA+ LF E L ++V VN
Sbjct: 203 LICGYARGDRPKEAVSLFFEML------------------------------NKVMVNA- 231
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
L+D Y + G +D ++++FD ++++ V +N+I++ YA+
Sbjct: 232 ----------------------LVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYAR 269
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
GLA EAL + D+M++ + + VT+ + + A A L L GK H + +E++ I
Sbjct: 270 QGLAREALAILDEMLQQGP-RPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGI 328
Query: 327 -----VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK 381
+ T+++DM+ +CG A + FN+M E++V +WTA I M A LF +
Sbjct: 329 PCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQ 388
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
M+ GV+P+ + FV VL+ACSH G V++G H + M + I P +EHYGCMVDLLGRAG
Sbjct: 389 MLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAG 447
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSN 501
L+EA+DLI+ M ++ + VVWGSLL ACR+HKNV++ AA+++ EL P G HVLLSN
Sbjct: 448 LLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSN 507
Query: 502 IYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEE 561
IYA+AG+W DV R R ++ + + K PG S V++ G +H F GD+ HP+ I L+E
Sbjct: 508 IYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQE 567
Query: 562 LNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRV 603
+N + + G++ D+++V+ DVD++EKE L HSEKLA NLR+
Sbjct: 568 MNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRM 627
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
C DCH+ ++ S + +REI+VRD+ RFH+F+ GLCSC DYW
Sbjct: 628 CSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 668
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 9/181 (4%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDA---YARGGHVDVSRKVFDGMIEK----DAV-TWNSIIA 262
H + K G D L++A A +D +RK F+ E DA+ NS+I
Sbjct: 45 HCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNSLIR 104
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
Y+ GL EA+ ++ +M+ V N T VL + G +H V+KM LE
Sbjct: 105 GYSSAGLGREAILLYVRML-VLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLE 163
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
E V + +I Y +CG +D K F M E+NV SWT++I GY R +EA+ LF++M
Sbjct: 164 EDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEM 223
Query: 383 I 383
+
Sbjct: 224 L 224
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/632 (37%), Positives = 359/632 (56%), Gaps = 55/632 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +V SW +++ R EALR M+ + + + I L D+ SG
Sbjct: 149 MPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSG 208
Query: 93 KQAHQQAF--IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+ H + +V +++ALIDMY K G L+ A++LFD + +R ++VSWT M+ G
Sbjct: 209 RAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKR--SVVSWTVMIAG 266
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
+++ E F L E+ +F + + + S+++ C V + +
Sbjct: 267 CIRSCRLDEGAKNFNRMLEEK------------LFPNEITLLSLITECGFVGTLDLGKWF 314
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H ++++ GF + + LID Y + G V +R +F+G+ +KD W+ +I+ YA
Sbjct: 315 HAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCM 374
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+ ++F +M+ + DVK N VT+ ++L A G L LGK H + + LE VI+ T+
Sbjct: 375 DQVFNLFVEMLNN-DVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETA 433
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+I+MY KCG V +AR FN+ ++++R W M+AG+ MH +EAL+LF +M GV PN
Sbjct: 434 LINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPN 493
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
ITFVS+ ACSH+GL+ EHYGC+VDLLGRAG L EA+++I
Sbjct: 494 DITFVSIFHACSHSGLM--------------------EHYGCLVDLLGRAGHLDEAHNII 533
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
E M ++ + ++WG+LL AC++HKN+ LGE+AA+K+ EL+P NCGY VL SNIYA+A RW
Sbjct: 534 ENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWN 593
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
DV R M + + K PG S +E+ G VH F GDK Q K+YE + E+ +KL+E G
Sbjct: 594 DVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESG 653
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
Y + +V+ ++D+EEKE L HSEKLA NLR+C DCH +
Sbjct: 654 YTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATK 713
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
L+SK+ R I+VRD RFH+F +G CSC YW
Sbjct: 714 LLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 208/400 (52%), Gaps = 21/400 (5%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
P +K+C+ G++ H A GF DVFV +AL++MY KCG L AR +FD++P
Sbjct: 91 LPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMP 150
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+ R++VSWT+ML YV++ EAL L +E V + VA+ S++
Sbjct: 151 E--RDVVSWTTMLGCYVRSKAFGEALRLVREMQFV------------GVKLSGVALISLI 196
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDS--EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+ + HG++++ D EV + LID Y +GG + ++++FD + ++
Sbjct: 197 AVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRS 256
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V+W +IA ++ E F++M++ N +TL +++ +G L LGK H
Sbjct: 257 VVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFP-NEITLLSLITECGFVGTLDLGKWFH 315
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+++ S+ + T++IDMY KCGQV AR FN +K+K+V+ W+ +I+ Y
Sbjct: 316 AYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMD 375
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
+ +LF +M+ V+PN +T VS+LS C+ AG + G W + + +E V +
Sbjct: 376 QVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLG-KWTHAYINRHGLEVDVILETAL 434
Query: 434 VDLLGRAGKLKEAYDLI-EGMKVKADFVVWGSLLGACRIH 472
+++ + G + A L E M + D +W +++ +H
Sbjct: 435 INMYAKCGDVTIARSLFNEAM--QRDIRMWNTMMAGFSMH 472
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 160/292 (54%), Gaps = 7/292 (2%)
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
++D +D+ + S+L AC++ + + HGF K GF S+V V N L++ Y + G +
Sbjct: 80 SNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCL 139
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+R VFD M E+D V+W +++ Y ++ EAL + +M + VK + V L +++
Sbjct: 140 VSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREM-QFVGVKLSGVALISLIAV 198
Query: 300 IAHLGVLRLGKCIHDQVIKM--DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
+L ++ G+ +H +++ D + V + T++IDMYCK G + A++ F+++ +++V
Sbjct: 199 FGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVV 258
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG-WHWLNT 416
SWT MIAG CR E F +M++ + PN IT +S+++ C G + G W
Sbjct: 259 SWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYL 318
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ + F + + ++D+ G+ G++ A L G+K K D +W L+ A
Sbjct: 319 LRNGFGMSLAL--VTALIDMYGKCGQVGYARALFNGVK-KKDVKIWSVLISA 367
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 196/418 (46%), Gaps = 56/418 (13%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + K +V SW +IA R E + F+ M + L P T I C +
Sbjct: 248 LFDR-LSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVG 306
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H GF + + +ALIDMY KCG++ AR LF+ + + +++ W+ +
Sbjct: 307 TLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKK--KDVKIWSVL 364
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ Y + LF E L +++V ++V + S+LS C+ +
Sbjct: 365 ISAYAHVSCMDQVFNLFVEML------------NNDVKPNNVTMVSLLSLCAEAGALDLG 412
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H ++ + G + +V + LI+ YA+ G V ++R +F+ +++D WN+++A ++ +
Sbjct: 413 KWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMH 472
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EAL++F +M +S V+ N +T ++ A +H G++ C
Sbjct: 473 GCGKEALELFSEM-ESHGVEPNDITFVSIFHACSHSGLMEHYGC---------------- 515
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMH-------CRAREALDL- 378
++D+ + G +D A M + N W A++A +H AR+ L+L
Sbjct: 516 ---LVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELD 572
Query: 379 ----FYKMIKAGV-----RPNYITFVSVLSACSHAGLVQE-GWHWLNTMGHEFNIEPG 426
Y ++K+ + R N +T SV A SH+G+ +E G W+ G + + G
Sbjct: 573 PQNCGYSVLKSNIYASAKRWNDVT--SVREAMSHSGMKKEPGLSWIEVSGSVHHFKSG 628
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 10/241 (4%)
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
+N +I+ Y N L + + + M + + L ++L A A LG+ +H
Sbjct: 55 YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFA 114
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
K V V ++++MY KCG + AR F+QM E++V SWT M+ Y EAL
Sbjct: 115 QKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEAL 174
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG----WHWLNTMGHEFNIEPGVEHYGC 432
L +M GV+ + + +S+++ + ++ G + + +G E + V
Sbjct: 175 RLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDE---KMEVSMTTA 231
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--LEP 490
++D+ + G L A L + + K V W ++ C +D G ++ E L P
Sbjct: 232 LIDMYCKGGCLASAQRLFDRLS-KRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFP 290
Query: 491 N 491
N
Sbjct: 291 N 291
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/584 (41%), Positives = 344/584 (58%), Gaps = 32/584 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++SC + G+Q H + + G D +++ L+D+Y+ CG +S AR+LFDE+P +
Sbjct: 70 LRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQ-G 128
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+ W ++ Y ++ A+ L++E L CG D+ VL AC+
Sbjct: 129 NVFLWNVLIRAYARDGPREAAIELYREML----ACGSMEP-------DNFTYPPVLKACA 177
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ G H V++ + ++V V LID YA+ G VD + VFD +DAV WNS
Sbjct: 178 ALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNS 237
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+IA QNG AEAL + M + + VTL + + A A G L G+ +H +
Sbjct: 238 MIAACGQNGRPAEALALCRNMA-AEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRR 296
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
+ TS++DMY K G V +AR F+Q+ + + SW AMI G+GMH A A +LF
Sbjct: 297 GFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELF 356
Query: 380 YKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
+M +A V P++ITFV VLSAC+H G+VQE + M ++I+P V+HY C+VD+LG
Sbjct: 357 RRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLG 416
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVL 498
+G+ KEA D+I+GM VK D +WG+LL C+IHKNV+L E+A KL ELEP + G +VL
Sbjct: 417 HSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVL 476
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEY 558
LSNIYA +G+WE+ R R LM NR L K S +EL+GK H FLVGD HP+ ++IYE
Sbjct: 477 LSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEE 536
Query: 559 LEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------N 600
LE L + + GYV D TSV H+V+ +EK +R HSE+LA N
Sbjct: 537 LERLEGLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKN 596
Query: 601 LRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
LRVC DCH VI+LIS++ REI++RD R+H+F +G CSC D+W
Sbjct: 597 LRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 176/360 (48%), Gaps = 17/360 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-SLTPTRSTFPCAIKSCSAL 86
LF++ ++ NVF WN +I AR G A+ + M S+ P T+P +K+C+AL
Sbjct: 120 LFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAAL 179
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
DL +G++ H + + DVFV + LIDMY+KCG + +A +FD +R+ V W S
Sbjct: 180 LDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDS--TTVRDAVVWNS 237
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ QN EAL L + E + V + S +SA +
Sbjct: 238 MIAACGQNGRPAEALALCRNMAAE------------GIAPTIVTLVSAISAAADAGALPR 285
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
HG+ +RGF S+ + +L+D YA+ G V V+R +FD + ++ ++WN++I +
Sbjct: 286 GRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGM 345
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESV 325
+G A A ++F +M V + +T VL A H G+++ K + D ++ + ++ V
Sbjct: 346 HGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMV 405
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
T ++D+ G+ A M K + W A++ G +H A +K+I+
Sbjct: 406 QHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIE 465
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/628 (37%), Positives = 360/628 (57%), Gaps = 33/628 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKL-SLTPTRSTFPCAIKSCSALHDLHSGKQA 95
NV SWN ++A GG+ +E L F +M L + P F A+ +CS + G Q
Sbjct: 80 NVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQC 139
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP-QRIRNIVSWTSMLTGYVQN 154
H F FG +V SAL+ MYS+C + A ++ D +P + + +I S+ S+L V++
Sbjct: 140 HGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVES 199
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
EA+ + + + EC V D V V+ C+++ + H +
Sbjct: 200 GRGEEAVEVLRRMV---DEC---------VAWDHVTYVGVMGLCAQIRDLQLGLRVHARL 247
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
++ G + VG+ LID Y + G V +R VFDG+ ++ V W +++ Y QNG E+L
Sbjct: 248 LRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESL 307
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
++F M + + N T + +L A A + LR G +H +V K+ + VIV ++I+M
Sbjct: 308 NLFTCMDREGTLP-NEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINM 366
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y K G +D + F M +++ +W AMI GY H ++AL +F M+ A PNY+TF
Sbjct: 367 YSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTF 426
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
+ VLSA SH GLV+EG+++LN + F IEPG+EHY CMV LL RAG L EA + ++ +
Sbjct: 427 IGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQ 486
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
VK D V W +LL AC +H+N DLG A+ + +++P++ G + LLSN+YA A RW+ V
Sbjct: 487 VKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVT 546
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTD 574
R LM+ R + K PG S +++R +H FL HP+ +IY+ +++L ++ +GYV +
Sbjct: 547 IRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPN 606
Query: 575 MTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISK 616
+ SV+HDV+ E+KE L HSEKLA NLR+C DCHT ++LISK
Sbjct: 607 IASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLRMCDDCHTAVKLISK 666
Query: 617 VVDREIVVRDSKRFHYFKDGLCSCGDYW 644
V +R I+VRD+ RFH+F+DG C+C D+W
Sbjct: 667 VTNRLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 203/404 (50%), Gaps = 26/404 (6%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFI---FGFHRDVFVSSALIDMYSKCGELSDA 127
P+ +K C+ + L GK H Q I H + ++L+ +Y KCG+L A
Sbjct: 10 PSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLA 69
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R LFD +P +RN+VSW ++ GY+ N E L+LFK + ++ C N +V
Sbjct: 70 RNLFDAMP--LRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNAC-------PNEYVF 120
Query: 188 SVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+ A LSACS V EG HG + K G V + L+ Y+R HV+++ +V
Sbjct: 121 TTA----LSACSH--GGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQV 174
Query: 246 FD---GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
D G D ++NS++ ++G EA++V +MV V + VT V+ A
Sbjct: 175 LDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDEC-VAWDHVTYVGVMGLCAQ 233
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
+ L+LG +H ++++ L VG+ +IDMY KCG+V AR F+ ++ +NV WTA+
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTAL 293
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
+ Y + E+L+LF M + G PN TF +L+AC+ ++ G L+ +
Sbjct: 294 MTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHG-DLLHARVEKLG 352
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ V ++++ ++G + +Y++ M + D + W +++
Sbjct: 353 FKNHVIVRNALINMYSKSGSIDSSYNVFTDM-IYRDIITWNAMI 395
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 168/336 (50%), Gaps = 17/336 (5%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
N++FS+NSV+ L G EA+ M + T+ + C+ + DL G +
Sbjct: 184 NDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRV 243
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H + G D FV S LIDMY KCGE+ +AR +FD + RN+V WT+++T Y+QN
Sbjct: 244 HARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQN--RNVVVWTALMTAYLQNG 301
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
E+L LF + + + A +L+AC+ + + H V
Sbjct: 302 YFEESLNLF------------TCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVE 349
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
K GF + V V N LI+ Y++ G +D S VF MI +D +TWN++I Y+ +GL +AL
Sbjct: 350 KLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQ 409
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDM 334
VF MV + + N VT VL A +HLG+++ G + +++ +E + T ++ +
Sbjct: 410 VFQDMVSAEECP-NYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVAL 468
Query: 335 YCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMH 369
+ G +D A + K +V +W ++ +H
Sbjct: 469 LSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVH 504
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N+L+ Y + G + ++R +FD M ++ V+WN ++A Y G E L +F MV +
Sbjct: 54 NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
N + L A +H G ++ G H + K L V ++++ MY +C V+LA +
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173
Query: 347 AFNQMKEKNVR---SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
+ + ++V S+ +++ R EA+++ +M+ V +++T+V V+ C+
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGV---EHYGCM-VDLLGRAGKLKEAYDLIEGMKVKADF 459
+Q G H + G+ E G M +D+ G+ G++ A ++ +G++ + +
Sbjct: 234 IRDLQLG-----LRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNR-NV 287
Query: 460 VVWGSLLGA 468
VVW +L+ A
Sbjct: 288 VVWTALMTA 296
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 142/327 (43%), Gaps = 53/327 (16%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ NV W +++ + G E+L F+ M + P TF + +C+ + L G
Sbjct: 282 LQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHG 341
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H + GF V V +ALI+MYSK G + + +F ++ R+I++W +M+ GY
Sbjct: 342 DLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIY--RDIITWNAMICGYS 399
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ ++AL +F++ + E EC + V VLSA S H
Sbjct: 400 HHGLGKQALQVFQDMVSAE-ECP-----------NYVTFIGVLSAYS-----------HL 436
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++K GF N L+ + IE + ++A+ ++ GL E
Sbjct: 437 GLVKEGFYYL----NHLMRNFK---------------IEPGLEHYTCMVALLSRAGLLDE 477
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A + +K+T VK + V +L A LG+ I + V++MD + VGT +
Sbjct: 478 A----ENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHD---VGTYTL 530
Query: 333 --DMYCKCGQVDLARKAFNQMKEKNVR 357
+MY K + D M+E+N++
Sbjct: 531 LSNMYAKARRWDGVVTIRKLMRERNIK 557
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/598 (40%), Positives = 350/598 (58%), Gaps = 37/598 (6%)
Query: 68 SLTPTRST---FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
S P +T + ++SC L+ GKQ H Q + G + +++ L+ +Y+ L
Sbjct: 39 SFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSL 98
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
+AR LFD+IP++ N+ W ++ GY N A++L+ + L +
Sbjct: 99 LNARNLFDKIPKQ--NLFLWNVLIRGYAWNGPHDNAIILYHKML------------DYGL 144
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
D+ + VL ACS ++ G H +VIK G++ ++ VG LID YA+ G V + +
Sbjct: 145 RPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGR 204
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VFD ++ +DAV WNS++A YAQNG E++ + +M + V+ TL V+ + A +
Sbjct: 205 VFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMA-ANGVRPTEATLVTVISSSADVA 263
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L G+ IH + + + V T++IDMY KCG V +A F +++EK V SW A+I
Sbjct: 264 CLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIIT 323
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
GY MH A ALDLF KM K RP++ITFV VL+ACS L+ EG N M ++ I
Sbjct: 324 GYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGIT 382
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
P V+HY CM+DLLG G+L EAYDLI M VK D VWG+LL +C+IH NV+L E+A +K
Sbjct: 383 PTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEK 442
Query: 485 LFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLV 544
L ELEP++ G +V+L+N+YA +G+WE VE+ R +M ++R+ K S +E++ KV+AFL
Sbjct: 443 LIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLA 502
Query: 545 GDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----- 599
GD H + IY L+ L + E GY D SV HDV+++EK + HSE+LA
Sbjct: 503 GDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGL 562
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH I+ ISK+++REI VRD R+H FK G+CSCGD+W
Sbjct: 563 ISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 179/348 (51%), Gaps = 19/348 (5%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N LF+K + K N+F WN +I A G A+ + M L P T P +K+C
Sbjct: 100 NARNLFDK-IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKAC 158
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
SAL + G+ H+ G+ RD+FV +ALIDMY+KCG + DA ++FD+I +R+ V
Sbjct: 159 SALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKI--VVRDAVL 216
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W SML Y QN + E++ L +E ++ V + +V+S+ + V
Sbjct: 217 WNSMLAAYAQNGHPDESISLCREM------------AANGVRPTEATLVTVISSSADVAC 264
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
HGF + GF S V LID YA+ G V V+ +F+ + EK V+WN+II
Sbjct: 265 LPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITG 324
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLE 322
YA +GLA ALD+FD+M K + + +T VL A + +L G+ +++ +++ +
Sbjct: 325 YAMHGLAVGALDLFDKMRKED--RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGIT 382
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMH 369
+V T +ID+ CGQ+D A M K + W A++ +H
Sbjct: 383 PTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIH 430
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/629 (38%), Positives = 362/629 (57%), Gaps = 36/629 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS-GKQA 95
V S+ + I+ A+ G + AL AF+ M +L L P TFP A K+ ++ + G Q
Sbjct: 81 TVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQI 140
Query: 96 HQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H A FG+ D FVS A +DMY K G L AR LF E+P R N+V+W +++T V +
Sbjct: 141 HSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNR--NVVAWNAVMTNAVLD 198
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
E + E E GG + V+ + +AC+ + E HGFV
Sbjct: 199 GRPLETI----EAYFGLREAGG--------LPNVVSACAFFNACAGAMYLSLGEQFHGFV 246
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+K GF+ +V V N+++D Y + +R VFDGM +++V+W S++A YAQNG EA
Sbjct: 247 VKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAF 306
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+ +S + + + SA+ LG L LG+ +H ++ ++ ++ V ++++DM
Sbjct: 307 AAYLGARRSGEEPTDFMVSSALTTCAGLLG-LHLGRALHAVAVRSCIDANIFVASALVDM 365
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-VRPNYIT 393
Y KCG V+ A + F + ++N+ +W AMI GY A+ AL +F MI++G PNYIT
Sbjct: 366 YGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYIT 425
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
V+V+++CS GL ++G+ TM F IEP EHY C+VDLLGRAG ++AY++I+GM
Sbjct: 426 LVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGM 485
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
++ VWG+LLGAC++H +LG IAA+KLFEL+P + G HVLLSN++A+AGRW +
Sbjct: 486 PMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEAT 545
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
R MKN + K PG S V + VH F D +H + +I L +L ++Q GY+
Sbjct: 546 DIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMP 605
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
D ++D+++EEKE + HSEKLA NLR+C DCH + IS
Sbjct: 606 DTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFIS 665
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+V REI+VRD+ RFH+FK CSCGDYW
Sbjct: 666 GIVGREIIVRDNNRFHHFKQYQCSCGDYW 694
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Query: 307 RLGKCIHDQVIKMDLEE-SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
RLG+ H + +++ S + ++++Y K A A V S+TA I+G
Sbjct: 32 RLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISG 91
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
H R AL F M++ G+RPN TF S A + A ++++ F P
Sbjct: 92 AAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLP 151
Query: 426 GVEHYGC-MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
C +D+ + G+LK A L M + + V W +++
Sbjct: 152 VDPFVSCAALDMYFKTGRLKLARHLFGEMPNR-NVVAWNAVM 192
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 255/669 (38%), Positives = 386/669 (57%), Gaps = 46/669 (6%)
Query: 3 LSKSSSVSSVVSN--VDKHSTNTNLTTLFNKY--VDKNNVFSWNSVIADLARGGDSVEAL 58
LS +++ S+ ++N + +S +L + + + + N SW ++++ L++ +AL
Sbjct: 198 LSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADAL 257
Query: 59 RAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMY 118
AF++MR+ + PTR A ++ +AL + A + GF ++FV+S L DMY
Sbjct: 258 AAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASV-GFDTELFVASNLADMY 316
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
SKCG LS+A ++FD++PQ+ + V+WT+M+ GY +N + A+L F++ E
Sbjct: 317 SKCGLLSEACRVFDQMPQK--DAVAWTAMIDGYAKNGSLEAAVLSFRDMKRE-------- 366
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
V D SVLSA + +++ H V K GF+ EV V N LID YA+
Sbjct: 367 ---GLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMD 423
Query: 239 VDVSRKVFDGMIEKDAVTWN-----SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
V+ + +V ++ D WN S+I Y + EAL ++ ++ + V+ N T
Sbjct: 424 VESASRV----LKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL-RRQGVEPNEFTF 478
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
S+++ A +L G +H QVIK DL VG++++DMY KCG + L+ + FN+++
Sbjct: 479 SSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEY 538
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
+ +W A+I + H REA+ F +MI +G+RPN+I FVS+L+ACSHAGLV EG +
Sbjct: 539 RTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKY 598
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
+M IEP EHY C++D GRAG+L EAY I M +K + W SLLGACR+
Sbjct: 599 FYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRG 658
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
+ +LGE+AA+ L +LEP N G HV LS IYA+ G+WEDV+ R LM++ R+ K PGFS V
Sbjct: 659 SKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWV 718
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
+ K H F D HPQ + IYE LEEL +++E GY+ D + + +++ KE LR
Sbjct: 719 DSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRY 778
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSE++A NLR+C DCHT + I KV R+I+VRD+ RFH+F +
Sbjct: 779 HSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVN 838
Query: 636 GLCSCGDYW 644
G CSCGDYW
Sbjct: 839 GRCSCGDYW 847
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 162/371 (43%), Gaps = 46/371 (12%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHR-DVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
++SC DL G+ H + + G F+++ LI MYS C +L+ A +LF +P+
Sbjct: 27 LQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPR-- 84
Query: 139 RNIVSWTSMLTGYVQN----------------DNAREALLLFKEF--------LLEESEC 174
RN VSWT++++G QN A L+ +F L S C
Sbjct: 85 RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHC 144
Query: 175 GGAS------------ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG-FVIKRGFDS 221
+V +AS+L +C R H V+ +
Sbjct: 145 HSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAA 204
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+ N LI Y+ + + ++F M ++AV+W ++++ +QN + A+AL F M
Sbjct: 205 STFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMR 264
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
++ SA A A LR C + D E + V +++ DMY KCG +
Sbjct: 265 RAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTE--LFVASNLADMYSKCGLL 322
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-VRPNYITFVSVLSA 400
A + F+QM +K+ +WTAMI GY + A+ F M + G V + F SVLSA
Sbjct: 323 SEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA 382
Query: 401 CSHAGLVQEGW 411
+G +++GW
Sbjct: 383 ---SGGLKDGW 390
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQ-VIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
V L+++L + G LR G+ +H + V+ S + +I MY C + A +
Sbjct: 19 TTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRL 78
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
F M +N SWT +++G + +AL F M +AGV P + +
Sbjct: 79 FAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIY 125
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 255/637 (40%), Positives = 366/637 (57%), Gaps = 44/637 (6%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++F++ + + ++ WN++I S + + F + L P T PC IK C+ L
Sbjct: 68 SIFDR-IQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARL 125
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ GKQ H A GF DVFV +L++MYSKCGE+ ARK+FD + + ++V W S
Sbjct: 126 GVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDK--DVVLWNS 183
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ GY + AL LF+E ++ S V VD LS C +V
Sbjct: 184 LIDGYARCGEIDIALQLFEEMPERDA-------FSWTVLVDG------LSKCGKV----- 225
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
E A + + V N +I+ Y + G D + ++F M D VTWN +IA Y
Sbjct: 226 -ESARKLFDQMPCRNLVS-WNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYEL 283
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG +A+ +F M+K +A TL +VL A++ L VL G+ IH + K E I
Sbjct: 284 NGQFMDAVKMFFMMLKLGSRPSHA-TLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGI 342
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
+GTS+I+MY KCG ++ A F +++K V WTA+I G G+H A AL LF +M K G
Sbjct: 343 LGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTG 402
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
++PN I F+ VL+AC+HAGLV +G + + M +E+ IEP +EHYGC+VD+L RAG L+EA
Sbjct: 403 LKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEA 462
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
+ IE M + + V+W SLLG R H +D+GE AA+++ E+ P G ++LLSN+YA +
Sbjct: 463 KNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAAS 522
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
G WE V R +M R K PG S VE +G +H F+VGD HPQ ++IY + E+ KL
Sbjct: 523 GMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKL 582
Query: 567 QEVGYVTDMTSVIHDVDQE-EKEMTLRIHSEKLA------------------NLRVCGDC 607
+ VG+V D T V+ ++ E EKE L HSE+LA NLRVC DC
Sbjct: 583 KCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDC 642
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H+V +L+SK+ REI+VRD+ RFH+FK+G CSC DYW
Sbjct: 643 HSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 14/264 (5%)
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV--SRKVFDGMIEKDAVTWNSIIAIY 264
E H F +K + V + L+ Y+ D+ +R +FD + + + WN+II Y
Sbjct: 29 VEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCY 88
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
+N + + + +F ++V + + TL V+ A LGV++ GK IH +K+
Sbjct: 89 VENQFSHDGIVLFHELVH--EYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSD 146
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V V S+++MY KCG++D ARK F+ M +K+V W ++I GY AL LF +M +
Sbjct: 147 VFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPE 206
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
++ V LS C G V+ + M + + M++ ++G
Sbjct: 207 RDAF-SWTVLVDGLSKC---GKVESARKLFDQMPCR-----NLVSWNAMINGYMKSGDFD 257
Query: 445 EAYDLIEGMKVKADFVVWGSLLGA 468
A +L M + D V W ++
Sbjct: 258 SALELFYQMPI-WDLVTWNLMIAG 280
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/660 (36%), Positives = 370/660 (56%), Gaps = 61/660 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK-LSLTPTRSTFPCAIKSCSALHDLHS 91
+ ++V SWNS+++ A G E++R ++ M K S+ R TF + S +
Sbjct: 97 MPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDL 156
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ--------------R 137
G+Q H Q F FG+ +FV S L+DMY+K G ++DA ++F+EIP+ R
Sbjct: 157 GRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLR 216
Query: 138 IRNIV---------------SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
R IV SWT+++TG QN +EA+ FKE +E
Sbjct: 217 CRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIE------------ 264
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
+D SVL+AC + H ++I+ + + VG+ L+D Y + +V +
Sbjct: 265 GFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYA 324
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
VF M K+ ++W +++ Y QNG + EA+ +F M ++ ++ + TL +V+ + A+
Sbjct: 325 EAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRN-EIHPDDFTLGSVISSCAN 383
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
L L G H Q + L V V ++I +Y KCG ++ A + F++MK ++ SWTA+
Sbjct: 384 LASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTAL 443
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
++GY +A E + LF M+ G+ P+ +TFV VLSACS AGLV++G+H+ M E
Sbjct: 444 VSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHR 503
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
I P +HY CM+DLL RAG+L+EA + I M D + W +LL +CR++ N+++G+ AA
Sbjct: 504 ITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAA 563
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
+ L +LEP N ++LLS+IYA G+W+DV + R M+ + K PG S ++ + KVH F
Sbjct: 564 ESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIF 623
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
D+ P ++IY LE L +K+ E GYV DM+ V+HDV++ EK L HSEKLA
Sbjct: 624 SADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAF 683
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH + IS++ REI+VRD+ RFH FKDG+CSCGD+W
Sbjct: 684 GLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVCSCGDFW 743
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 219/463 (47%), Gaps = 84/463 (18%)
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
++ + + + A+K C + K+ H + + + F+ + LI+ Y K G+L +AR
Sbjct: 1 MSSSSNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNAR 60
Query: 129 KLFDEIP-----------------------QRI------RNIVSWTSMLTGYVQNDNARE 159
+FD IP QR+ ++VSW S+L+GY N E
Sbjct: 61 NVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISE 120
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
++ ++ L + S V ++ + +++L S + HG + K G+
Sbjct: 121 SVRVYNMMLKDGS-----------VNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGY 169
Query: 220 DSEVGVGNTLIDAYARGGHV-DVSR------------------------------KVFDG 248
S + VG+ L+D YA+ G + D +R ++FD
Sbjct: 170 QSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDN 229
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC-NAVTLSAVLLAIAHLGVLR 307
M EKD+++W +II QNGL EA+D F +M + C + T +VL A L
Sbjct: 230 MPEKDSISWTTIITGLTQNGLFKEAVDKFKEM--GIEGFCMDQFTFGSVLTACGGFLALD 287
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
GK IH +I+ D ++++ VG++++DMYCKC V A F +M+ KNV SWTAM+ GYG
Sbjct: 288 EGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYG 347
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+ + EA+ +F M + + P+ T SV+S+C++ ++EG + H + G+
Sbjct: 348 QNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQF-----HGQALASGL 402
Query: 428 EHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ ++ L G+ G L+ A+ L MK++ D V W +L+
Sbjct: 403 ICFVTVSNALITLYGKCGSLEHAHQLFHEMKIR-DEVSWTALV 444
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/642 (36%), Positives = 357/642 (55%), Gaps = 35/642 (5%)
Query: 23 TNLTTLFNKYVDKN--NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAI 80
+++ T N +++ NV WN ++ D + R F M+ + P + T+P +
Sbjct: 421 SDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 480
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
K+C L DL G+Q H Q F + +V S LIDMY+K G+L A + + +
Sbjct: 481 KTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK--D 538
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
+VSWT+M+ GY Q + +AL F++ L + D V + + +SAC+
Sbjct: 539 VVSWTTMIAGYTQYNFDDKALTTFRQML------------DRGIRSDEVGLTNAVSACAG 586
Query: 201 VTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSI 260
+ + H GF S++ N L+ Y++ G+++ + F+ D + WN++
Sbjct: 587 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNAL 646
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
++ + Q+G EAL VF +M + + N T + + A + ++ GK +H + K
Sbjct: 647 VSGFQQSGNNEEALRVFARMNRE-GIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTG 705
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
+ V +II MY KCG + A+K F ++ KN SW AMI Y H EALD F
Sbjct: 706 YDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFD 765
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+MI + VRPN++T V VLSACSH GLV +G + +M E+ + P EHY C+VD+L RA
Sbjct: 766 QMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRA 825
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
G L A D I M ++ D +VW +LL AC +HKN+++GE AA L ELEP + +VLLS
Sbjct: 826 GLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLS 885
Query: 501 NIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLE 560
N+YA +W+ + TR MK + + K PG S +E++ +H+F VGD+ HP ++I+EY +
Sbjct: 886 NLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFK 945
Query: 561 ELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLR 602
+L + E+GYV D S++ ++ QE+K+ T+ IHSEKLA NLR
Sbjct: 946 DLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLR 1005
Query: 603 VCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
VC DCH I+ +SKV +REI+VRD+ RFH+F+ G CSC DYW
Sbjct: 1006 VCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 219/441 (49%), Gaps = 26/441 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC---SALHDL 89
+ + +F+WN +I +LA S + F M ++TP TF +++C S D+
Sbjct: 129 MPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDV 188
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
+Q H + G + V + LID+YS+ G + AR++FD + +++ SW +M++
Sbjct: 189 --VEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGL--YLKDHSSWVAMIS 244
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
G +N+ EA+ LF + + + A +SVLSAC ++ + E
Sbjct: 245 GLSKNECEVEAIRLFCDMYVL------------GIMPTPYAFSSVLSACKKIESLEIGEQ 292
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG V+K GF S+ V N L+ Y G + + +F M ++DAVT+N++I +Q G
Sbjct: 293 LHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 352
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
+A+++F +M + ++ ++ TL+++++A + G L G+ +H K+ + +
Sbjct: 353 GEKAMELFKRM-QLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEG 411
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+++++Y KC ++ A F + + +NV W M+ YG+ R + +F +M + P
Sbjct: 412 ALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 471
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC--MVDLLGRAGKLKEAY 447
N T+ S+L C G ++ G + + + Y C ++D+ + GKL A+
Sbjct: 472 NQYTYPSILKTCIRLGDLELGEQIHSQI---IKTSFQLNAYVCSVLIDMYAKLGKLDTAW 528
Query: 448 DLIEGMKVKADFVVWGSLLGA 468
D++ K D V W +++
Sbjct: 529 DILIRFAGK-DVVSWTTMIAG 548
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 205/440 (46%), Gaps = 17/440 (3%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + ++N++I L++ G +A+ F M+ L P +T + +CS+ L SG
Sbjct: 332 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSG 391
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H GF + + AL+++Y+KC ++ A F E + N+V W ML Y
Sbjct: 392 QQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLET--EVENVVLWNVMLVAYG 449
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
D+ R + +F++ +EE + + S+L C R+ + E H
Sbjct: 450 LLDDLRNSFRIFRQMQIEE------------IVPNQYTYPSILKTCIRLGDLELGEQIHS 497
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+IK F V + LID YA+ G +D + + KD V+W ++IA Y Q +
Sbjct: 498 QIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK 557
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL F QM+ ++ + V L+ + A A L L+ G+ IH Q + +++
Sbjct: 558 ALTTFRQML-DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 616
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+Y KCG ++ A AF Q + + +W A+++G+ EAL +F +M + G+ N
Sbjct: 617 TLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNF 676
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF S + A S +++G ++ + + + E ++ + + G + +A
Sbjct: 677 TFGSAVKAASETANMKQGKQ-VHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLE 735
Query: 453 MKVKADFVVWGSLLGACRIH 472
+ +K + V W +++ A H
Sbjct: 736 LSMKNE-VSWNAMINAYSKH 754
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 197/449 (43%), Gaps = 37/449 (8%)
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALH-DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
S+ + P T ++ C + L G++ H Q GF + +S L+D Y
Sbjct: 57 SVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFK 116
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G+L A K+FDE+P+ R I +W M+ + + LF + +
Sbjct: 117 GDLDGALKVFDEMPE--RTIFTWNKMIKELASRSLSGKVFCLFGRMV------------N 162
Query: 182 DNVFVDSVAIASVLSACSRVTVN-GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+NV + + VL AC +V V E H +I +G V N LID Y+R G VD
Sbjct: 163 ENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVD 222
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+R+VFDG+ KD +W ++I+ ++N EA+ +F M + S+VL A
Sbjct: 223 RARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMY-VLGIMPTPYAFSSVLSAC 281
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
+ L +G+ +H V+K+ V +++ +Y G + A F+ M +++ ++
Sbjct: 282 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYN 341
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
+I G +A++LF +M G+ P+ T S++ ACS G + G L+ +
Sbjct: 342 TLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSG-QQLHAYTTK 400
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA----------CR 470
+ G +++L + ++ A + +V+ + V+W +L A R
Sbjct: 401 LGFASNDKIEGALLNLYAKCSDIETALNYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFR 459
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
I + + + EI PN Y +L
Sbjct: 460 IFRQMQIEEIV--------PNQYTYPSIL 480
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/636 (38%), Positives = 362/636 (56%), Gaps = 40/636 (6%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ +V +WN++++ L + G EA++ M L + P TF A+ +CS L L G++
Sbjct: 233 RGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGRE 292
Query: 95 AHQQAFIFG---FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
H A++ + FV+SAL+DMY+ ++ AR++FD +P + + W +M+ GY
Sbjct: 293 MH--AYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGY 350
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVD-SVAIASVLSACSRVTVNGVTEGA 210
Q EAL LF E+E G FV +ASVL AC+R E
Sbjct: 351 AQAGMDEEALRLFARM---EAEAG---------FVPCETTMASVLPACARSEAFAGKEAV 398
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG+V+KRG V N L+D YAR G DV+R++F + D V+WN++I G
Sbjct: 399 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 458
Query: 271 AEALDVFDQM--VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
A+A + +M ++ V NA+TL +L A L GK IH ++ L+ V VG
Sbjct: 459 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVG 518
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-V 387
++++DMY KCG + L+R F+++ +N +W +I YGMH EA LF +M +G
Sbjct: 519 SALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 578
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
RPN +TF++ L+ACSH+G+V G + M + +EP + C+VD+LGRAG+L EAY
Sbjct: 579 RPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAY 638
Query: 448 DLIEGMKVKADFV-VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
++ M+ V W ++LGACR+H+NV LGEIA ++L ELEP ++VLL NIY+ A
Sbjct: 639 AMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAA 698
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
G+W RS M+ R +AK PG S +E+ G +H F+ G+ HP E+++ ++E L ++
Sbjct: 699 GQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEM 758
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
GY D + V+HD+D +K LR HSEKLA NLRVC DCH
Sbjct: 759 VARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCH 818
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +SK+V REIV+RD +RFH+F++G CSCGDYW
Sbjct: 819 EAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 176/366 (48%), Gaps = 44/366 (12%)
Query: 51 GGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH----QQAFIFGFHR 106
GG + + S +R +S P +A + G++AH + + G R
Sbjct: 156 GGHPLTSFTLVSVLRAVSHLP------------AAAAAVRLGREAHAFALKNGLLHGHQR 203
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
F +AL+ MY++ G ++DA++LF ++V+W +M++ VQ+ EA+ +
Sbjct: 204 --FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYD 261
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG-- 224
+ + V D V AS L ACSR+ + V H +VIK D E+
Sbjct: 262 MV------------ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK---DDELAAN 306
Query: 225 --VGNTLIDAYARGGHVDVSRKVFDGMIE--KDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
V + L+D YA V +R+VFD + + K WN++I YAQ G+ EAL +F +M
Sbjct: 307 SFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARM 366
Query: 281 -VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
++ V C T+++VL A A + +H V+K + + V +++DMY + G
Sbjct: 367 EAEAGFVPCE-TTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLG 425
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK---AGVRPNYITFVS 396
+ D+AR+ F + +V SW +I G + +A L +M + GV PN IT ++
Sbjct: 426 KTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMT 485
Query: 397 VLSACS 402
+L C+
Sbjct: 486 LLPGCA 491
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 31/221 (14%)
Query: 211 HGFVIKRGF--DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK--DAVTWNSIIAIYAQ 266
H ++RG V N L+ AYAR G + + +VF + + DAV++NS+I+
Sbjct: 80 HAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLIS---- 135
Query: 267 NGLAAEALDVFDQ---------MVKSTDVKCNAVTLSAVLLAIAHL----GVLRLGKCIH 313
AL +F + + + + TL +VL A++HL +RLG+ H
Sbjct: 136 ------ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAH 189
Query: 314 DQVIKMDL--EESVIVGTSIIDMYCKCGQVDLARKAFNQMKE--KNVRSWTAMIAGYGMH 369
+K L +++ MY + G V A++ F +V +W M++
Sbjct: 190 AFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQS 249
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
EA+ Y M+ GVRP+ +TF S L ACS L+ G
Sbjct: 250 GMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVG 290
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/636 (38%), Positives = 362/636 (56%), Gaps = 40/636 (6%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ +V +WN++++ L + G EA++ M L + P TF A+ +CS L L G++
Sbjct: 233 RGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGRE 292
Query: 95 AHQQAFIFG---FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
H A++ + FV+SAL+DMY+ ++ AR++FD +P + + W +M+ GY
Sbjct: 293 MH--AYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGY 350
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVD-SVAIASVLSACSRVTVNGVTEGA 210
Q EAL LF E+E G FV +ASVL AC+R E
Sbjct: 351 AQAGMDEEALRLFARM---EAEAG---------FVPCETTMASVLPACARSEAFAGKEAV 398
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG+V+KRG V N L+D YAR G DV+R++F + D V+WN++I G
Sbjct: 399 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 458
Query: 271 AEALDVFDQM--VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
A+A + +M ++ V NA+TL +L A L GK IH ++ L+ V VG
Sbjct: 459 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVG 518
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-V 387
++++DMY KCG + L+R F+++ +N +W +I YGMH EA LF +M +G
Sbjct: 519 SALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 578
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
RPN +TF++ L+ACSH+G+V G + M + +EP + C+VD+LGRAG+L EAY
Sbjct: 579 RPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAY 638
Query: 448 DLIEGMKVKADFV-VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
++ M+ V W ++LGACR+H+NV LGEIA ++L ELEP ++VLL NIY+ A
Sbjct: 639 AMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAA 698
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
G+W RS M+ R +AK PG S +E+ G +H F+ G+ HP E+++ ++E L ++
Sbjct: 699 GQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEM 758
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
GY D + V+HD+D +K LR HSEKLA NLRVC DCH
Sbjct: 759 VARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCH 818
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +SK+V REIV+RD +RFH+F++G CSCGDYW
Sbjct: 819 EAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 176/366 (48%), Gaps = 44/366 (12%)
Query: 51 GGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH----QQAFIFGFHR 106
GG + + S +R +S P +A + G++AH + + G R
Sbjct: 156 GGHPLTSFTLVSVLRAVSHLP------------AAAAAVRLGREAHAFALKNGLLHGHQR 203
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
F +AL+ MY++ G ++DA++LF ++V+W +M++ VQ+ EA+ +
Sbjct: 204 --FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYD 261
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG-- 224
+ + V D V AS L ACSR+ + V H +VIK D E+
Sbjct: 262 MV------------ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK---DDELAAN 306
Query: 225 --VGNTLIDAYARGGHVDVSRKVFDGMIE--KDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
V + L+D YA V +R+VFD + + K WN++I YAQ G+ EAL +F +M
Sbjct: 307 SFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARM 366
Query: 281 -VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
++ V C T+++VL A A + +H V+K + + V +++DMY + G
Sbjct: 367 EAEAGFVPCE-TTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLG 425
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK---AGVRPNYITFVS 396
+ D+AR+ F + +V SW +I G + +A L +M + GV PN IT ++
Sbjct: 426 KTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMT 485
Query: 397 VLSACS 402
+L C+
Sbjct: 486 LLPGCA 491
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 31/221 (14%)
Query: 211 HGFVIKRGF--DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK--DAVTWNSIIAIYAQ 266
H ++RG V N L+ AYAR G + + +VF + + DAV++NS+I+
Sbjct: 80 HAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLIS---- 135
Query: 267 NGLAAEALDVFDQ---------MVKSTDVKCNAVTLSAVLLAIAHL----GVLRLGKCIH 313
AL +F + + + + TL +VL A++HL +RLG+ H
Sbjct: 136 ------ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAH 189
Query: 314 DQVIKMDL--EESVIVGTSIIDMYCKCGQVDLARKAFNQMKE--KNVRSWTAMIAGYGMH 369
+K L +++ MY + G V A++ F +V +W M++
Sbjct: 190 AFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQS 249
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
EA+ Y M+ GVRP+ +TF S L ACS L+ G
Sbjct: 250 GMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVG 290
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/583 (39%), Positives = 345/583 (59%), Gaps = 33/583 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+K C+ L GK H Q + G D+ S+ LI+MYSKCG + AR++FDE+P R
Sbjct: 71 LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSR-- 128
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++VSW +M+ QN EAL + LL+ G I+SVL AC+
Sbjct: 129 SLVSWNTMIGSLTQNGEENEAL----DLLLQMQREGTP--------FSEFTISSVLCACA 176
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ H F IK D V V L+D YA+ G + + VF+ M ++ VTW+S
Sbjct: 177 AKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSS 236
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+ A Y QN + +AL +F + + T +K + +S+V+ A A L + GK ++ + K
Sbjct: 237 MAAGYVQNEMYEQALALFRKAWE-TGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKS 295
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
++ V +S+IDMY KCG ++ + K F ++++NV W AMI+G H R+ E + LF
Sbjct: 296 GFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILF 355
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
KM + G+ PN +TFVSVLSAC H GLV++G + + M E ++ P V HY CMVD L R
Sbjct: 356 EKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSR 415
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
AG++ EAYDLI + A +WGSLL +CR H N++L E+AAKKLF++EP+N G ++LL
Sbjct: 416 AGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLL 475
Query: 500 SNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYL 559
SN+YA G+W++V + R L+K + K G S +E++ KVH F+VG++ HP+ +IY L
Sbjct: 476 SNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKL 535
Query: 560 EELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NL 601
E+ +LQ++GY + +H V + K+ LR HSEKLA NL
Sbjct: 536 NEVMDELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNL 595
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
R+CGDCH+ ++L SK R+++VRD+ RFH+FK+G CSCGD+W
Sbjct: 596 RICGDCHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 179/344 (52%), Gaps = 21/344 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SWN++I L + G+ EAL M++ + T + +C+A L + H
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A +VFV++AL+D+Y+KCG + DA +F+ +P R++V+W+SM GYVQN+
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPD--RSVVTWSSMAAGYVQNEM 246
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+AL LF+ + E G D ++SV+ AC+ + + + + K
Sbjct: 247 YEQALALFR----KAWETGLKH--------DQFLMSSVICACAGLAAMIEGKQVNALLSK 294
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
GF S + V ++LID YA+ G ++ S KVF + +++ V WN++I+ +++ + E + +
Sbjct: 295 SGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMIL 354
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMY 335
F++M + + N VT +VL A H+G+++ G+ D + K L +V + ++D
Sbjct: 355 FEKM-QQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTL 413
Query: 336 CKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
+ GQ+ A +++ + W +++A CR L+L
Sbjct: 414 SRAGQIFEAYDLISKLPFNASASMWGSLLAS----CRTHGNLEL 453
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 159/312 (50%), Gaps = 5/312 (1%)
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+ +L C++ + + H ++ G +++ N LI+ Y++ G VD +R+VFD M
Sbjct: 67 VHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMP 126
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+ V+WN++I QNG EALD+ QM + + T+S+VL A A L +
Sbjct: 127 SRSLVSWNTMIGSLTQNGEENEALDLLLQMQRE-GTPFSEFTISSVLCACAAKCALSECQ 185
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
+H IK ++ +V V T+++D+Y KCG + A F M +++V +W++M AGY +
Sbjct: 186 LLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNE 245
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
+AL LF K + G++ + SV+ AC+ + EG +N + + +
Sbjct: 246 MYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQ-VNALLSKSGFCSNIFVA 304
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--L 488
++D+ + G ++E+Y + ++ K + V+W +++ H I +K+ + L
Sbjct: 305 SSLIDMYAKCGGIEESYKVFRDVE-KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGL 363
Query: 489 EPNNCGYHVLLS 500
PN+ + +LS
Sbjct: 364 SPNDVTFVSVLS 375
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 13/191 (6%)
Query: 282 KSTDVKCNAVTLSAV---LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
K T NA +S V L A +L GK H Q++ M L+ ++ +I+MY KC
Sbjct: 53 KPTTKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKC 112
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G VD AR+ F++M +++ SW MI + EALDL +M + G + T SVL
Sbjct: 113 GSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVL 172
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMK 454
AC+ + E + H F I+ ++ ++D+ + G +K+A + E M
Sbjct: 173 CACAAKCALSEC-----QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP 227
Query: 455 VKADFVVWGSL 465
++ V W S+
Sbjct: 228 DRS-VVTWSSM 237
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 249/656 (37%), Positives = 367/656 (55%), Gaps = 68/656 (10%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
+++I+ L G S EA++ +SS+++ + P F A K+C+ D K+ H A
Sbjct: 133 STLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATR 192
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
G DVFV +ALI Y KC + AR++FD++ +R++VSWTS+ + YV+ R+ +
Sbjct: 193 CGVMSDVFVGNALIHAYGKCKCVEGARRVFDDL--VVRDVVSWTSLSSCYVKCGFPRKGM 250
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
+F+E G S N + ++S+L AC+ + + HGF ++ G
Sbjct: 251 DVFREM--------GWSGVKPN----PMTVSSILPACAELKDLKSGKEIHGFAVRHGMVV 298
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY----------------- 264
+ V + L+ YA+ V +R VFD M +D V+WN ++ Y
Sbjct: 299 NLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMS 358
Query: 265 ------------------AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+NG + EA+++F +M K K N +T+S++L A + L
Sbjct: 359 RDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK-MGFKPNEITISSILPACSFSENL 417
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
R+GK IH V + + T+++ MY KCG ++L+R F+ M+ K+V +W MI
Sbjct: 418 RMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIAN 477
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
MH +EAL LF KM+ + V+PN +TF VLS CSH+ LV+EG N+MG + +EP
Sbjct: 478 AMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPD 537
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
HY C+VD+ RAG+L EAY I+GM ++ WG+LL ACR++KNV+L +I+AKKLF
Sbjct: 538 ANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLF 597
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
E+EPNN G +V L NI A W + + R LMK R + KTPG S +++ KVH F+VGD
Sbjct: 598 EIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGD 657
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
K + + +KIY +L+EL K++ GY D V+ D+DQEEK +L HSEKLA
Sbjct: 658 KSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILN 717
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCH I+ +SKVV IVVRDS RFH+FK+G CSC D W
Sbjct: 718 LNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 178/371 (47%), Gaps = 40/371 (10%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SW S+ + + G + + F M + P T + +C+ L DL SGK+ H
Sbjct: 229 DVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIH 288
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A G ++FV SAL+ +Y+KC + +AR +FD +P R++VSW +LT Y +N
Sbjct: 289 GFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH--RDVVSWNGVLTAYFKNKE 346
Query: 157 AREALLLFKEFLLEESECG------------------GASENSDNVF---------VDSV 189
+ LF L+ S G G SE + +F + +
Sbjct: 347 YEKGFSLF----LKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 402
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
I+S+L ACS + + H +V + ++ L+ YA+ G +++SR VFD M
Sbjct: 403 TISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM 462
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
KD V WN++I A +G EAL +FD+M+ S V+ N+VT + VL +H ++ G
Sbjct: 463 RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSR-VQPNSVTFTGVLSGCSHSRLVEEG 521
Query: 310 KCIHDQVIKMDLEESVIVGTS-IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYG 367
I + + + L E S ++D+Y + G+++ A K M E +W A++A
Sbjct: 522 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA-- 579
Query: 368 MHCRAREALDL 378
CR + ++L
Sbjct: 580 --CRVYKNVEL 588
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 201/432 (46%), Gaps = 70/432 (16%)
Query: 114 LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
LI + G+ + AR+LFD IPQ + + +++++ + + EA+ ++ L+E
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQ--PDPTTCSTLISALTTHGLSNEAIKIYSS--LQER- 158
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY 233
G + VF+ + +V RV + H + G S+V VGN LI AY
Sbjct: 159 --GIKPDMP-VFLAAAKACAVSGDALRV------KEVHDDATRCGVMSDVFVGNALIHAY 209
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ V+ +R+VFD ++ +D V+W S+ + Y + G + +DVF +M S VK N +T+
Sbjct: 210 GKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWS-GVKPNPMTV 268
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
S++L A A L L+ GK IH ++ + ++ V ++++ +Y KC V AR F+ M
Sbjct: 269 SSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH 328
Query: 354 KNVRS-----------------------------------WTAMIAGYGMHCRAREALDL 378
++V S W A+I G + R+ EA+++
Sbjct: 329 RDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEM 388
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEG--------WHWLNTMGHEFNIEPGVEHY 430
F KM K G +PN IT S+L ACS + ++ G HW +G +
Sbjct: 389 FRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHW--KVGD-------LTST 439
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF--EL 488
++ + + G L + ++ + M+ K D V W +++ A +H N K+ +
Sbjct: 440 TALLYMYAKCGDLNLSRNVFDMMRRK-DVVAWNTMIIANAMHGNGKEALFLFDKMLLSRV 498
Query: 489 EPNNCGYHVLLS 500
+PN+ + +LS
Sbjct: 499 QPNSVTFTGVLS 510
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 126/258 (48%), Gaps = 11/258 (4%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+G LI G + +R++FD + + D T +++I+ +GL+ EA+ ++ + +
Sbjct: 100 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSL-QER 158
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+K + A A A G K +HD + + V VG ++I Y KC V+ A
Sbjct: 159 GIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 218
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R+ F+ + ++V SWT++ + Y R+ +D+F +M +GV+PN +T S+L AC+
Sbjct: 219 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 278
Query: 405 GLVQEGWHWLNTMGHEFNIEPG--VEHYGC--MVDLLGRAGKLKEAYDLIEGMKVKADFV 460
++ G H F + G V + C +V L + ++EA + + M + D V
Sbjct: 279 KDLKSGKEI-----HGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVV 332
Query: 461 VWGSLLGACRIHKNVDLG 478
W +L A +K + G
Sbjct: 333 SWNGVLTAYFKNKEYEKG 350
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 12/122 (9%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ +V +WN++I A G+ EAL F M + P TF + CS + G Q
Sbjct: 464 RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQ 523
Query: 95 AHQQAFIFGFHRDVFVS------SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
RD V S ++D+YS+ G L++A K +P +W ++L
Sbjct: 524 IFNS-----MGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPME-PTASAWGALL 577
Query: 149 TG 150
Sbjct: 578 AA 579
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/659 (36%), Positives = 363/659 (55%), Gaps = 70/659 (10%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
+N + DL+R + + + +R + + +F +K+ S + L G + H AF
Sbjct: 79 FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAF 138
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
D FV + +DMY+ CG ++ AR +FDE+ R ++V+W +M+ Y + EA
Sbjct: 139 KIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR--DVVTWNTMIERYCRFGLVDEA 196
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK---- 216
LF+E NV D + + +++SAC R + F+I+
Sbjct: 197 FKLFEEM------------KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVR 244
Query: 217 ----------------------RGFDSEVGVGN-----TLIDAYARGGHVDVSRKVFDGM 249
R F ++ V N ++ Y++ G +D ++ +FD
Sbjct: 245 MDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQT 304
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+KD V W ++I+ Y ++ EAL VF++M S +K + V++ +V+ A A+LG+L
Sbjct: 305 EKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS-GIKPDVVSMFSVISACANLGILDKA 363
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K +H + LE + + ++I+MY KCG +D R F +M +NV SW++MI MH
Sbjct: 364 KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMH 423
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
A +AL LF +M + V PN +TFV VL CSH+GLV+EG +M E+NI P +EH
Sbjct: 424 GEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEH 483
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
YGCMVDL GRA L+EA ++IE M V ++ V+WGSL+ ACRIH ++LG+ AAK++ ELE
Sbjct: 484 YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELE 543
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
P++ G VL+SNIYA RWEDV R +M+ + + K G S ++ GK H FL+GDK H
Sbjct: 544 PDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRH 603
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
Q +IY L+E+ KL+ GYV D SV+ DV++EEK+ + HSEKLA
Sbjct: 604 KQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEK 663
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH +L+SKV +REI+VRD RFH +K+GLCSC DYW
Sbjct: 664 EEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 62/125 (49%), Gaps = 14/125 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW+S+I L+ G++ +AL F+ M++ ++ P TF + CS + G
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464
Query: 93 KQAHQQAFIFGFHRDVFVSSA-------LIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
K+ IF D + + ++D++ + L +A ++ + +P N+V W
Sbjct: 465 KK------IFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPV-ASNVVIWG 517
Query: 146 SMLTG 150
S+++
Sbjct: 518 SLMSA 522
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/636 (38%), Positives = 362/636 (56%), Gaps = 40/636 (6%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ +V +WN++++ L + G EA++ M L + P TF A+ +CS L L G++
Sbjct: 235 RGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGRE 294
Query: 95 AHQQAFIFG---FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
H A++ + FV+SAL+DMY+ ++ AR++FD +P + + W +M+ GY
Sbjct: 295 MH--AYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGY 352
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVD-SVAIASVLSACSRVTVNGVTEGA 210
Q EAL LF E+E G FV +ASVL AC+R E
Sbjct: 353 AQAGMDEEALRLFARM---EAEAG---------FVPCETTMASVLPACARSEAFAGKEAV 400
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG+V+KRG V N L+D YAR G DV+R++F + D V+WN++I G
Sbjct: 401 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 460
Query: 271 AEALDVFDQM--VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
A+A + +M ++ V NA+TL +L A L GK IH ++ L+ V VG
Sbjct: 461 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVG 520
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-V 387
++++DMY KCG + L+R F+++ +N +W +I YGMH EA LF +M +G
Sbjct: 521 SALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 580
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
RPN +TF++ L+ACSH+G+V G + M + +EP + C+VD+LGRAG+L EAY
Sbjct: 581 RPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAY 640
Query: 448 DLIEGMKVKADFV-VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
++ M+ V W ++LGACR+H+NV LGEIA ++L ELEP ++VLL NIY+ A
Sbjct: 641 AMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAA 700
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
G+W RS M+ R +AK PG S +E+ G +H F+ G+ HP E+++ ++E L ++
Sbjct: 701 GQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEM 760
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
GY D + V+HD+D +K LR HSEKLA NLRVC DCH
Sbjct: 761 VARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCH 820
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +SK+V REIV+RD +RFH+F++G CSCGDYW
Sbjct: 821 EAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 176/366 (48%), Gaps = 44/366 (12%)
Query: 51 GGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH----QQAFIFGFHR 106
GG + + S +R +S P +A + G++AH + + G R
Sbjct: 158 GGHPLTSFTLVSVLRAVSHLP------------AAAAAVRLGREAHAFALKNGLLHGHQR 205
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
F +AL+ MY++ G ++DA++LF ++V+W +M++ VQ+ EA+ +
Sbjct: 206 --FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYD 263
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG-- 224
+ + V D V AS L ACSR+ + V H +VIK D E+
Sbjct: 264 MV------------ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK---DDELAAN 308
Query: 225 --VGNTLIDAYARGGHVDVSRKVFDGMIE--KDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
V + L+D YA V +R+VFD + + K WN++I YAQ G+ EAL +F +M
Sbjct: 309 SFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARM 368
Query: 281 -VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
++ V C T+++VL A A + +H V+K + + V +++DMY + G
Sbjct: 369 EAEAGFVPCE-TTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLG 427
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK---AGVRPNYITFVS 396
+ D+AR+ F + +V SW +I G + +A L +M + GV PN IT ++
Sbjct: 428 KTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMT 487
Query: 397 VLSACS 402
+L C+
Sbjct: 488 LLPGCA 493
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 31/221 (14%)
Query: 211 HGFVIKRGF--DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK--DAVTWNSIIAIYAQ 266
H ++RG V N L+ AYAR G + + +VF + + DAV++NS+I+
Sbjct: 82 HAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLIS---- 137
Query: 267 NGLAAEALDVFDQ---------MVKSTDVKCNAVTLSAVLLAIAHL----GVLRLGKCIH 313
AL +F + + + + TL +VL A++HL +RLG+ H
Sbjct: 138 ------ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAH 191
Query: 314 DQVIKMDL--EESVIVGTSIIDMYCKCGQVDLARKAFNQMKE--KNVRSWTAMIAGYGMH 369
+K L +++ MY + G V A++ F +V +W M++
Sbjct: 192 AFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQS 251
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
EA+ Y M+ GVRP+ +TF S L ACS L+ G
Sbjct: 252 GMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVG 292
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/645 (35%), Positives = 371/645 (57%), Gaps = 33/645 (5%)
Query: 19 HSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC 78
HS + N + + F N++I AR + EA+ + M + + T+P
Sbjct: 57 HSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPF 116
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
+ +C+ L + G++ H + GF D+FV +ALI Y CG A +FDE +
Sbjct: 117 VLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDE--STV 174
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
R++V+W M+ ++ + +A L E DN+ D V + S++ AC
Sbjct: 175 RDVVTWNIMINAHLNKGLSEKAFDLLDEM-----------TKLDNLRPDEVTMVSLVPAC 223
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+++ + H + + G D + V N ++D Y + ++ +++VF+ + EKD ++W
Sbjct: 224 AQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWT 283
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
S+++ A++G EAL +F +M + ++ + +TL VL A A G L GK IH + K
Sbjct: 284 SMLSGLAKSGYFQEALALFQKM-QLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDK 342
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
++ +++ T+++DMY KCG +DLA + F +M+ +NV +W A+I G MH +A+ L
Sbjct: 343 FEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISL 402
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
F +M + P+ +TF+++L ACSHAGLV EG M ++F IEP +EHYGC+VDLL
Sbjct: 403 FDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLC 462
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVL 498
RA K+ +A IE M +KA+ V+W +LLGACR + DL E +++ ELEP++CG +V+
Sbjct: 463 RARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVM 522
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEY 558
LSN+YA +W+ + R MKN+ + KTPG S +EL G +H F+ GD+ H Q E+IY
Sbjct: 523 LSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAM 582
Query: 559 LEELNVKLQ-EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
+EE+ ++ + G+V +V+ D+++EEKE +L +HSEKLA
Sbjct: 583 IEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVK 642
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH+ +++ SKV +REIV RD RFH+FK+G CSC D+W
Sbjct: 643 NLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 6/263 (2%)
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLID--AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
T+ AH +++ + LI A + G ++ +RK+F M D N++I Y
Sbjct: 27 TKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGY 86
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
A++ EA+ ++ MV+ V + T VL A A LG ++LG+ H +V+K
Sbjct: 87 ARSQNPYEAVSLYYFMVER-GVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSD 145
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+ V ++I Y CG A F++ ++V +W MI + + +A DL +M K
Sbjct: 146 LFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTK 205
Query: 385 A-GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+RP+ +T VS++ AC+ G ++ G +L++ E ++ + ++D+ + +
Sbjct: 206 LDNLRPDEVTMVSLVPACAQLGNLERG-KFLHSYSKELGLDENLRVNNAILDMYCKCDDI 264
Query: 444 KEAYDLIEGMKVKADFVVWGSLL 466
+ A ++ ++ K D + W S+L
Sbjct: 265 ESAQEVFNRIREK-DVLSWTSML 286
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/657 (37%), Positives = 370/657 (56%), Gaps = 35/657 (5%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
S ++ V+S+++ K + LF++ + + +V SWNS+I G S L F
Sbjct: 503 SNTAVVNSLIAAYFKFGGVESAHNLFDE-LSEPDVVSWNSMINGCVVNGFSGNGLEIFIQ 561
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M L + +T + + + + +L G+ H F +V S+ L+DMYSKCG
Sbjct: 562 MLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGN 621
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L+ A ++F ++ IVSWTS + YV+ +A+ LF E S
Sbjct: 622 LNGATEVFVKMGDT--TIVSWTSTIAAYVREGLYSDAIGLFDEM------------QSKG 667
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V D + S++ AC+ + H +VIK G S + V N LI+ YA+ G V+ +R
Sbjct: 668 VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEAR 727
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VF + KD V+WN++I Y+QN L EAL++F M K K + +T++ VL A A L
Sbjct: 728 LVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK--QFKPDDITMACVLPACAGL 785
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L G+ IH +++ + V +++DMY KCG + LA+ F+ + +K++ SWT MI
Sbjct: 786 AALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMI 845
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
AGYGMH EA+ F +M AG+ P+ +F +L+ACSH+GL+ EGW + N+M +E +
Sbjct: 846 AGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGV 905
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
EP +EHY C+VDLL R G L +AY IE M +K D +WG LL CRIH +V L E A+
Sbjct: 906 EPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAE 965
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
+FELEP+N Y+V+L+N+YA A +WE+V++ R M+ R + PG S +E+ GK + F+
Sbjct: 966 HIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFV 1025
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
G+ +HPQ ++I L +L +++Q Y + V+ + D EKEM HSEK A
Sbjct: 1026 AGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFG 1085
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
N RVCGDCH + + +SK REIV+RDS RFH+FKDGLCSC D
Sbjct: 1086 ILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 145/480 (30%), Positives = 246/480 (51%), Gaps = 31/480 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++ + VF WN ++++ A+ G+ E++ F M+KL + TF C +K +AL
Sbjct: 426 IFDKIMN-DKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALG 484
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ K+ H GF + V ++LI Y K G + A LFDE+ + ++VSW SM
Sbjct: 485 KVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE--PDVVSWNSM 542
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G V N + L +F + L+ E VD + SVL A + + +
Sbjct: 543 INGCVVNGFSGNGLEIFIQMLILGVE------------VDLTTLVSVLVAWANIGNLSLG 590
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
HGF +K F EV NTL+D Y++ G+++ + +VF M + V+W S IA Y +
Sbjct: 591 RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVRE 650
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL ++A+ +FD+M +S V+ + T+++++ A A L G+ +H VIK + ++ V
Sbjct: 651 GLYSDAIGLFDEM-QSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPV 709
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++I+MY KCG V+ AR F+++ K++ SW MI GY + EAL+LF M K
Sbjct: 710 TNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-F 768
Query: 388 RPNYITFVSVLSACSHAGLVQEG----WHWLNTMGHEFNIEPGVEHYGC-MVDLLGRAGK 442
+P+ IT VL AC+ + +G H L G+ ++ H C +VD+ + G
Sbjct: 769 KPDDITMACVLPACAGLAALDKGREIHGHILRR-GYFSDL-----HVACALVDMYAKCGL 822
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIH--KNVDLGEIAAKKLFELEPNNCGYHVLLS 500
L A L+ M K D + W ++ +H N + ++ +EP+ + V+L+
Sbjct: 823 LVLA-QLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILN 881
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 211/432 (48%), Gaps = 29/432 (6%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N+ I GD A+ + + L +++ ++ C+ L GK+ H
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYELG--LNSYCSVLQLCAEKKSLEDGKRVHSVIIS 397
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
G D + + L+ MY CG+L RK+FD+I + W +++ Y + N RE++
Sbjct: 398 NGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMN--DKVFLWNLLMSEYAKIGNFRESV 455
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
LFK+ +++ G V A+ V C RV HG+V+K GF S
Sbjct: 456 SLFKK--MQKLGVVGNCYTFTCVLKCFAALGKV-KECKRV---------HGYVLKLGFGS 503
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
V N+LI AY + G V+ + +FD + E D V+WNS+I NG + L++F QM+
Sbjct: 504 NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML 563
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
V+ + TL +VL+A A++G L LG+ +H +K E V+ +++DMY KCG +
Sbjct: 564 -ILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNL 622
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ A + F +M + + SWT+ IA Y +A+ LF +M GVRP+ T S++ AC
Sbjct: 623 NGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHAC 682
Query: 402 SHAGLVQEG-----WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+ + + +G + N MG + ++++ + G ++EA + + VK
Sbjct: 683 ACSSSLDKGRDVHSYVIKNGMGSNLPVT------NALINMYAKCGSVEEARLVFSKIPVK 736
Query: 457 ADFVVWGSLLGA 468
D V W +++G
Sbjct: 737 -DIVSWNTMIGG 747
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+ + + KS + + +VL A L GK +H +I + +G ++ M
Sbjct: 354 NAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFM 413
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y CG + RK F+++ V W +++ Y RE++ LF KM K GV N TF
Sbjct: 414 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTF 473
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA----GKLKEAYDLI 450
VL + G V+E H + ++ G +V+ L A G ++ A++L
Sbjct: 474 TCVLKCFAALGKVKECKRV-----HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLF 528
Query: 451 EGMKVKADFVVWGSLLGACRIH 472
+ + + D V W S++ C ++
Sbjct: 529 DELS-EPDVVSWNSMINGCVVN 549
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/583 (39%), Positives = 345/583 (59%), Gaps = 33/583 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+K C+ L GK H Q + G D+ S+ LI+MYSKCG + AR++FDE+P R
Sbjct: 71 LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSR-- 128
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++VSW +M+ QN EAL + LL+ G I+SVL AC+
Sbjct: 129 SLVSWNTMIGSLTQNGEENEAL----DLLLQMQREGTP--------FSEFTISSVLCACA 176
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ H F IK D V V L+D YA+ G + + VF+ M ++ VTW+S
Sbjct: 177 AKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSS 236
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+ A Y QN + +AL +F + + T +K + +S+V+ A A L + GK ++ + K
Sbjct: 237 MAAGYVQNEMYEQALALFRKAWE-TGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKS 295
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
++ V +S+IDMY KCG ++ + K F ++++NV W AMI+G H R+ E + LF
Sbjct: 296 GFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILF 355
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
KM + G+ PN +TFVSVLSAC H GLV++G + + M E ++ P V HY CMVD L R
Sbjct: 356 EKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSR 415
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
AG++ EAYDLI + A +WGSLL +CR H N++L E+AAKKLF++EP+N G ++LL
Sbjct: 416 AGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLL 475
Query: 500 SNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYL 559
SN+YA G+W++V + R L+K + K G S +E++ KVH F+VG++ HP+ +IY L
Sbjct: 476 SNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKL 535
Query: 560 EELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NL 601
E+ +LQ++GY + +H V + K+ LR HSEKLA NL
Sbjct: 536 NEVMDELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNL 595
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
R+CGDCH+ ++L SK R+++VRD+ RFH+FK+G CSCGD+W
Sbjct: 596 RICGDCHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 179/344 (52%), Gaps = 21/344 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SWN++I L + G+ EAL M++ + T + +C+A L + H
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A +VFV++AL+D+Y+KCG + DA +F+ +P R++V+W+SM GYVQN+
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPD--RSVVTWSSMAAGYVQNEM 246
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+AL LF+ + E G D ++SV+ AC+ + + + + K
Sbjct: 247 YEQALALFR----KAWETGLKH--------DQFLMSSVICACAGLAAMIEGKQMNALLSK 294
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
GF S + V ++LID YA+ G ++ S KVF + +++ V WN++I+ +++ + E + +
Sbjct: 295 SGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMIL 354
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMY 335
F++M + + N VT +VL A H+G++R G+ D + K L +V + ++D
Sbjct: 355 FEKM-QQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTL 413
Query: 336 CKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
+ GQ+ A +++ + W +++A CR L+L
Sbjct: 414 SRAGQIFEAYDLISKLPFNASASMWGSLLAS----CRTHGNLEL 453
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 159/312 (50%), Gaps = 5/312 (1%)
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+ +L C++ + + H ++ G +++ N LI+ Y++ G VD +R+VFD M
Sbjct: 67 VHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMP 126
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+ V+WN++I QNG EALD+ QM + + T+S+VL A A L +
Sbjct: 127 SRSLVSWNTMIGSLTQNGEENEALDLLLQMQRE-GTPFSEFTISSVLCACAAKCALSECQ 185
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
+H IK ++ +V V T+++D+Y KCG + A F M +++V +W++M AGY +
Sbjct: 186 LLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNE 245
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
+AL LF K + G++ + SV+ AC+ + EG +N + + +
Sbjct: 246 MYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQ-MNALLSKSGFCSNIFVA 304
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--L 488
++D+ + G ++E+Y + ++ K + V+W +++ H I +K+ + L
Sbjct: 305 SSLIDMYAKCGGIEESYKVFRDVE-KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGL 363
Query: 489 EPNNCGYHVLLS 500
PN+ + +LS
Sbjct: 364 SPNDVTFVSVLS 375
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 13/191 (6%)
Query: 282 KSTDVKCNAVTLSAV---LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
K T NA +S V L A +L GK H Q++ M L+ ++ +I+MY KC
Sbjct: 53 KPTTKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKC 112
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G VD AR+ F++M +++ SW MI + EALDL +M + G + T SVL
Sbjct: 113 GSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVL 172
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMK 454
AC+ + E + H F I+ ++ ++D+ + G +K+A + E M
Sbjct: 173 CACAAKCALSEC-----QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP 227
Query: 455 VKADFVVWGSL 465
++ V W S+
Sbjct: 228 DRS-VVTWSSM 237
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/576 (40%), Positives = 343/576 (59%), Gaps = 39/576 (6%)
Query: 89 LHSGKQAHQQA--FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+H +AH Q + G +FVS++L+ MY+K G L DA +LFD +P+R N+V+WT+
Sbjct: 94 IHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGLLDDALRLFDRMPER--NVVTWTT 151
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ D +E L F + D V ++ +SVL AC GV
Sbjct: 152 VVAALANADGRKEEALRFLVAMWR-----------DGVAPNAYTFSSVLGACG---TPGV 197
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H +K G DS+V V ++LIDAY + G +D R+VFD M+ +D V WNSIIA +AQ
Sbjct: 198 LAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQ 257
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
+G A+++F +M K N TL++VL A + +L G+ +H V+K E +I
Sbjct: 258 SGDGVGAIELFMRM-KDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YERDLI 314
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
+ +++DMYCKCG ++ A F++M +++V SW+ MI+G + ++ EAL +F M G
Sbjct: 315 LHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEG 374
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
V PN IT V VL ACSHAGLV++GW++ +M F I+P EH+ CMVDLLGRAGKL EA
Sbjct: 375 VAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEA 434
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
+ I M ++ D V+W +LLGACR+HK+ +L AA+++ +LEP++ G VLLSN YA+
Sbjct: 435 VEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGARVLLSNTYADL 494
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
+W D E++ M++R + K PG S +EL VH F+ GD HP + I + L L ++
Sbjct: 495 RQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAGDLSHPCSDTIVQELNRLIGRI 554
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+GYV V+ D+ E+KE L+ HSEK+A NLR+CGDCH
Sbjct: 555 SALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFGTMHAVGGKPIRIMKNLRICGDCH 614
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+L+SK R I++RD RFH+F+DG CSCGDYW
Sbjct: 615 AFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDYW 650
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 179/363 (49%), Gaps = 24/363 (6%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARG-GDSVEALRAFSSMRKLS 68
+S+VS K + LF++ ++ NV +W +V+A LA G EALR +M +
Sbjct: 119 NSLVSMYAKFGLLDDALRLFDRMPER-NVVTWTTVVAALANADGRKEEALRFLVAMWRDG 177
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
+ P TF + +C L + H G DVFV S+LID Y K G+L R
Sbjct: 178 VAPNAYTFSSVLGACGTPGVLAA---LHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGR 234
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
++FDE+ R++V W S++ G+ Q+ + A+ LF + G S N
Sbjct: 235 RVFDEM--VTRDLVVWNSIIAGFAQSGDGVGAIELFMRM-----KDAGFSANQGT----- 282
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
+ SVL AC+ + + H V+K ++ ++ + N L+D Y + G ++ + +F
Sbjct: 283 --LTSVLRACTGMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHR 338
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M ++D ++W+++I+ AQNG +AEAL VFD M KS V N +T+ VL A +H G++
Sbjct: 339 MPQRDVISWSTMISGLAQNGKSAEALRVFDLM-KSEGVAPNRITMVGVLFACSHAGLVED 397
Query: 309 GKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGY 366
G + K+ ++ ++D+ + G++D A + M E + W ++
Sbjct: 398 GWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGAC 457
Query: 367 GMH 369
MH
Sbjct: 458 RMH 460
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 130/253 (51%), Gaps = 26/253 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ V ++ V WNS+IA A+ GD V A+ F M+ + + T +++C+ +
Sbjct: 236 VFDEMVTRDLVV-WNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMV 294
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L +G+Q H A + + RD+ + +AL+DMY KCG L DA LF +PQ R+++SW++M
Sbjct: 295 MLEAGRQVH--AHVLKYERDLILHNALLDMYCKCGSLEDAEALFHRMPQ--RDVISWSTM 350
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G QN + EAL +F S+ V + + + VL ACS + V
Sbjct: 351 ISGLAQNGKSAEALRVFDLM------------KSEGVAPNRITMVGVLFACSHAGL--VE 396
Query: 208 EGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA- 262
+G + F + G E N ++D R G +D + + M +E DAV W +++
Sbjct: 397 DGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGA 456
Query: 263 --IYAQNGLAAEA 273
++ LAA A
Sbjct: 457 CRMHKSGNLAAYA 469
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/663 (36%), Positives = 353/663 (53%), Gaps = 90/663 (13%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
+R +S P P A KSC L + H A + G RD FV+S+L+ Y + G
Sbjct: 11 LRHVSFPPDPHLLPTAFKSCPTLP---LARALHAVAEVSGLARDPFVASSLLHAYLRLGT 67
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN--- 180
+AR LFD +P+ R +V W++++ + +A A L +E + GG N
Sbjct: 68 TGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRD----GGVEPNVIT 123
Query: 181 --------------SDNVFV------------DSVAIASVLSACSRVTVNGVTEGAHGFV 214
D V D+ ++ LSA V + V + HG+
Sbjct: 124 WNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYA 183
Query: 215 IKRGFDSEVGVGNTLIDAYARGG-------------HVDVS------------------- 242
+K G ++ V LID Y + G H+DV+
Sbjct: 184 VKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEAL 243
Query: 243 ---RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
++ D +E + V+W SI+A QNG EA++ F +M ++ + N+VT+ VL A
Sbjct: 244 RLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREM-QAQGTEPNSVTIPCVLPA 302
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A++ L G+ H ++ V V ++++DMY KCG+V AR F+ M +NV SW
Sbjct: 303 FANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSW 362
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
AMI GY M+ A A+ +F+ M+K +P+ +TF +L+AC+ AGL +EG H+ M +
Sbjct: 363 NAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHN 422
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
E+ + P +EHY CMV LLGRAGKL EAYDLI M + D +WGSLLG+CR+H NVDL E
Sbjct: 423 EYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAE 482
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
+AA+KLF LEP N G +VLLSNIYA+ W+ V R R +MK+ L K G S +E++ KV
Sbjct: 483 VAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKV 542
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
H L GD HP I E + +LN++++++G+V V+HDV+++EK+ L +HSEKLA
Sbjct: 543 HMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLA 602
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLR+CGDCH ++ IS REI VRD+ RFH+F G CSCG
Sbjct: 603 VALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCG 662
Query: 642 DYW 644
D+W
Sbjct: 663 DFW 665
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 177/384 (46%), Gaps = 61/384 (15%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSALHDLHSGK 93
+ NV +WN +++ L R G + +A+ A ++M L P + CA+ + + + G+
Sbjct: 118 EPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQ 177
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDE-------------------- 133
Q H A G D V +ALIDMY KCG+ ++ ++FDE
Sbjct: 178 QLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNA 237
Query: 134 -IPQRIR------------NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
+ + +R N+VSWTS++ VQN EA+ F+E + +E
Sbjct: 238 QVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTE------- 290
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+SV I VL A + V AH F +++GF +V V + L+D YA+ G V
Sbjct: 291 -----PNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVK 345
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+R +FD M+ ++ V+WN++I YA G A A+ +F M+K K + VT + +L A
Sbjct: 346 DARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQ-KPDMVTFTCLLAAC 404
Query: 301 AHLGVLRLG----KCIHDQV-IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EK 354
G+ G K +H++ + +E ++ + + G++D A + M E
Sbjct: 405 TQAGLTEEGRHYFKEMHNEYGVSPRMEHY----ACMVTLLGRAGKLDEAYDLISDMPFEP 460
Query: 355 NVRSWTAMIAGYGMHCRAREALDL 378
+ W +++ CR +DL
Sbjct: 461 DAYIWGSLLGS----CRVHGNVDL 480
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 131/267 (49%), Gaps = 31/267 (11%)
Query: 7 SSVSSVVSNVDKHSTNTNLTTLFNKYVDKN---NVFSWNSVIADLARGGDSVEALRAFSS 63
+S +++++ + +++ LF ++VD+ NV SW S++A + G +EA+ F
Sbjct: 224 ASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFRE 283
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M+ P T PC + + + + L G+ AH A GF DV+VSSAL+DMY+KCG
Sbjct: 284 MQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGR 343
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ DAR +FD + RN+VSW +M+ GY A A+ +F L + +
Sbjct: 344 VKDARIIFDTMVS--RNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQK---------- 391
Query: 184 VFVDSVAIASVLSACSRVTVNGVT-EGAHGFVIKRGFDSEVGVGN------TLIDAYARG 236
D V +L+AC++ G+T EG H F + +E GV ++ R
Sbjct: 392 --PDMVTFTCLLAACTQA---GLTEEGRHYF---KEMHNEYGVSPRMEHYACMVTLLGRA 443
Query: 237 GHVDVSRKVFDGM-IEKDAVTWNSIIA 262
G +D + + M E DA W S++
Sbjct: 444 GKLDEAYDLISDMPFEPDAYIWGSLLG 470
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 249/656 (37%), Positives = 368/656 (56%), Gaps = 68/656 (10%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
+++I+ L G S EA++ +SS+++ + P F A K+C+ D K+ H A
Sbjct: 47 STLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATR 106
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
G DVFV +ALI Y KC + AR++FD++ +R++VSWTS+ + YV+ R+ +
Sbjct: 107 CGVMSDVFVGNALIHAYGKCKCVEGARRVFDDL--VVRDVVSWTSLSSCYVKCGFPRKGM 164
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
+F+E G S V + + ++S+L AC+ + + HGF ++ G
Sbjct: 165 DVFREM--------GWS----GVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVV 212
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY----------------- 264
+ V + L+ YA+ V +R VFD M +D V+WN ++ Y
Sbjct: 213 NLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMS 272
Query: 265 ------------------AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+NG + EA+++F +M K K N +T+S++L A + L
Sbjct: 273 RDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK-MGFKPNEITISSILPACSFSENL 331
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
R+GK IH V + + T+++ MY KCG ++L+R F+ M+ K+V +W MI
Sbjct: 332 RMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIAN 391
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
MH +EAL LF KM+ + V+PN +TF VLS CSH+ LV+EG N+MG + +EP
Sbjct: 392 AMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPD 451
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
HY C+VD+ RAG+L EAY I+GM ++ WG+LL ACR++KNV+L +I+AKKLF
Sbjct: 452 ANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLF 511
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
E+EPNN G +V L NI A W + + R LMK R + KTPG S +++ KVH F+VGD
Sbjct: 512 EIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGD 571
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
K + + +KIY +L+EL K++ GY D V+ D+DQEEK +L HSEKLA
Sbjct: 572 KSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILN 631
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCH I+ +SKVV IVVRDS RFH+FK+G CSC D W
Sbjct: 632 LNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 178/367 (48%), Gaps = 32/367 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SW S+ + + G + + F M + P T + +C+ L DL SGK+ H
Sbjct: 143 DVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIH 202
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A G ++FV SAL+ +Y+KC + +AR +FD +P R++VSW +LT Y +N
Sbjct: 203 GFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH--RDVVSWNGVLTAYFKNKE 260
Query: 157 AREALLLFKEFLLE---------ESECGGASENSDN-----VF---------VDSVAIAS 193
+ LF + + + GG EN + +F + + I+S
Sbjct: 261 YEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISS 320
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+L ACS + + H +V + ++ L+ YA+ G +++SR VFD M KD
Sbjct: 321 ILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKD 380
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V WN++I A +G EAL +FD+M+ S V+ N+VT + VL +H ++ G I
Sbjct: 381 VVAWNTMIIANAMHGNGKEALFLFDKMLLSR-VQPNSVTFTGVLSGCSHSRLVEEGVQIF 439
Query: 314 DQVIKMDL-EESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCR 371
+ + + L E + ++D+Y + G+++ A K M E +W A++A CR
Sbjct: 440 NSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA----CR 495
Query: 372 AREALDL 378
+ ++L
Sbjct: 496 VYKNVEL 502
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 199/424 (46%), Gaps = 54/424 (12%)
Query: 114 LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
LI + G+ + AR+LFD IPQ + + +++++ + + EA+ ++ L+E
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQ--PDPTTCSTLISALTTHGLSNEAIKIYSS--LQER- 72
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY 233
+ VF+ + +V RV + H + G S+V VGN LI AY
Sbjct: 73 ---GIKPDMPVFLAAAKACAVSGDALRV------KEVHDDATRCGVMSDVFVGNALIHAY 123
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ V+ +R+VFD ++ +D V+W S+ + Y + G + +DVF +M S VK N +T+
Sbjct: 124 GKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWS-GVKPNPMTV 182
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
S++L A A L L+ GK IH ++ + ++ V ++++ +Y KC V AR F+ M
Sbjct: 183 SSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH 242
Query: 354 KNVRS-----------------------------------WTAMIAGYGMHCRAREALDL 378
++V S W A+I G + R+ EA+++
Sbjct: 243 RDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEM 302
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
F KM K G +PN IT S+L ACS + ++ G + + + + ++ +
Sbjct: 303 FRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVG-DLTSTTALLYMYA 361
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF--ELEPNNCGYH 496
+ G L + ++ + M+ K D V W +++ A +H N K+ ++PN+ +
Sbjct: 362 KCGDLNLSRNVFDMMRRK-DVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFT 420
Query: 497 VLLS 500
+LS
Sbjct: 421 GVLS 424
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 126/258 (48%), Gaps = 11/258 (4%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+G LI G + +R++FD + + D T +++I+ +GL+ EA+ ++ + +
Sbjct: 14 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSL-QER 72
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+K + A A A G K +HD + + V VG ++I Y KC V+ A
Sbjct: 73 GIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 132
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R+ F+ + ++V SWT++ + Y R+ +D+F +M +GV+PN +T S+L AC+
Sbjct: 133 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 192
Query: 405 GLVQEGWHWLNTMGHEFNIEPG--VEHYGC--MVDLLGRAGKLKEAYDLIEGMKVKADFV 460
++ G H F + G V + C +V L + ++EA + + M + D V
Sbjct: 193 KDLKSGKEI-----HGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVV 246
Query: 461 VWGSLLGACRIHKNVDLG 478
W +L A +K + G
Sbjct: 247 SWNGVLTAYFKNKEYEKG 264
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 12/133 (9%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
NL+ + + +V +WN++I A G+ EAL F M + P TF + C
Sbjct: 367 NLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGC 426
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVS------SALIDMYSKCGELSDARKLFDEIPQR 137
S + G Q RD V S ++D+YS+ G L++A K +P
Sbjct: 427 SHSRLVEEGVQIFNS-----MGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPME 481
Query: 138 IRNIVSWTSMLTG 150
+W ++L
Sbjct: 482 -PTASAWGALLAA 493
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/626 (37%), Positives = 353/626 (56%), Gaps = 34/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SWNS+I+ G +A+ F M +T + +C+ LH L G+ H
Sbjct: 261 DVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVH 320
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+ GF +++ L+DMYS C + K+F + Q+ N+VSWT+M+T Y +
Sbjct: 321 GYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQK--NVVSWTAMITSYTRAGL 378
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+ LF+E LE + D AI S L A + + + HG+ I+
Sbjct: 379 YDKVAGLFQEMGLEGTR------------PDIFAITSALHAFAGNELLKHGKSVHGYAIR 426
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G + + V N L++ Y + G+++ ++ +FDG++ KD ++WN++I Y++N LA EA +
Sbjct: 427 NGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSL 486
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F +M+ ++ NAVT++ +L A A L L G+ +H ++ E V ++IDMY
Sbjct: 487 FTEML--LQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYV 544
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG + LAR+ F+++ KN+ SWT M+AGYGMH R R+A+ LF +M +G+ P+ +F +
Sbjct: 545 KCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSA 604
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+L ACSH+GL EGW + + M E IEP ++HY CMVDLL G LKEAY+ I+ M ++
Sbjct: 605 ILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIE 664
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
D +W SLL CRIH+NV L E A+++FELEP N GY+VLL+NIYA A RWE V + +
Sbjct: 665 PDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLK 724
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
+ + R L + G S +E +GKVH F+ ++ HPQ +I E+L E+ ++QE G+
Sbjct: 725 NKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKK 784
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
+ D L HS KLA N RVC CH + ISK+
Sbjct: 785 YALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMC 844
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
REI++RDS RFH+F+ G CSC YW
Sbjct: 845 SREIILRDSNRFHHFEQGRCSCRGYW 870
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 143/482 (29%), Positives = 229/482 (47%), Gaps = 37/482 (7%)
Query: 45 IADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF 104
I L R GD EAL S RS + ++ CS + L GK+AH
Sbjct: 68 IQRLCRSGDLEEALGLLGS----DGVDDRS-YGAVLQLCSEVRSLEGGKRAHFLVRASSL 122
Query: 105 HRDVF---VSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
RD + L+ MY KCG+L +AR++FDE+PQ + ++ WT++++GY + + RE +
Sbjct: 123 GRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQ-VSDVRVWTALMSGYAKAGDLREGV 181
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
LLF++ C G V D+ I+ VL + + E HG + K GF S
Sbjct: 182 LLFRKM-----HCCG-------VRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGS 229
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+ VGN L+ YA+ + VFDGM +D ++WNS+I+ NGL +A+++F +M
Sbjct: 230 QCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMW 289
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ + ++ TL +VL A A L +L LG+ +H +K + ++DMY C
Sbjct: 290 LEGE-ELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDW 348
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
K F M +KNV SWTAMI Y + LF +M G RP+ S L A
Sbjct: 349 RSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAF 408
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKA 457
+ L++ G H + I G+E ++++ + G ++EA + +G+ V
Sbjct: 409 AGNELLKHG-----KSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGV-VSK 462
Query: 458 DFVVWGSLLGA-CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
D + W +L+G R + + + + L +L PN V ++ I A +ER R
Sbjct: 463 DMISWNTLIGGYSRNNLANEAFSLFTEMLLQLRPNA----VTMTCILPAAASLSSLERGR 518
Query: 517 SL 518
+
Sbjct: 519 EM 520
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 194/388 (50%), Gaps = 18/388 (4%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N +F++ ++V W ++++ A+ GD E + F M + P T C +K
Sbjct: 147 NARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCI 206
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ L + G+ H GF V +AL+ Y+K DA +FD +P R+++S
Sbjct: 207 AGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPH--RDVIS 264
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W SM++G N +A+ LF LE E +DS + SVL AC+ + +
Sbjct: 265 WNSMISGCTSNGLYDKAIELFVRMWLEGEE------------LDSATLLSVLPACAELHL 312
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ HG+ +K GF S+ + N L+D Y+ + K+F M++K+ V+W ++I
Sbjct: 313 LFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITS 372
Query: 264 YAQNGLAAEALDVFDQM-VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
Y + GL + +F +M ++ T A+T + L A A +L+ GK +H I+ +E
Sbjct: 373 YTRAGLYDKVAGLFQEMGLEGTRPDIFAIT--SALHAFAGNELLKHGKSVHGYAIRNGME 430
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ + V ++++MY KCG ++ A+ F+ + K++ SW +I GY + A EA LF +M
Sbjct: 431 KVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEM 490
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEG 410
+ +RPN +T +L A + ++ G
Sbjct: 491 LLQ-LRPNAVTMTCILPAAASLSSLERG 517
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 179/363 (49%), Gaps = 39/363 (10%)
Query: 17 DKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGG--DSVEALRAFSSMRKLSLTPTRS 74
D STN +F V KN V SW ++I R G D V L +++ L TR
Sbjct: 347 DWRSTNK----IFRNMVQKN-VVSWTAMITSYTRAGLYDKVAGL-----FQEMGLEGTR- 395
Query: 75 TFPCAIKSCSALHD------LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
P SALH L GK H A G + + V++AL++MY KCG + +A+
Sbjct: 396 --PDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAK 453
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
+FD + ++++SW +++ GY +N+ A EA LF E LL+ + ++
Sbjct: 454 LIFDGVVS--KDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-------------LRPNA 498
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
V + +L A + ++ H + ++RG+ + V N LID Y + G + ++R++FD
Sbjct: 499 VTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDR 558
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
+ K+ ++W ++A Y +G +A+ +F+QM + + + +A + SA+L A +H G+
Sbjct: 559 LSNKNLISWTIMVAGYGMHGRGRDAIALFEQM-RVSGIAPDAASFSAILYACSHSGLRDE 617
Query: 309 GKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGY 366
G D + K +E + T ++D+ G + A + + M E + W +++ G
Sbjct: 618 GWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGC 677
Query: 367 GMH 369
+H
Sbjct: 678 RIH 680
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/638 (37%), Positives = 364/638 (57%), Gaps = 76/638 (11%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK-LSLTPTRSTFPCAIKSCSAL 86
LF+ + + + F N++I L+ + +L F +R+ +L+P TF A+K+ +
Sbjct: 58 LFHHFPNPDT-FMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANS 116
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G Q H QAF GF +FV + LI MY++CG+ AR++FDE+ + N+V+W +
Sbjct: 117 RHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEP--NVVTWNA 174
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+LT + CG E + +VF
Sbjct: 175 VLTAAFR--------------------CGDV-EGAQDVF--------------------- 192
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
G + R S N ++ YA+ G + ++R+VF M +D V+W+++I +A
Sbjct: 193 -----GCMPVRNLTS----WNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAH 243
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG EA F ++++ +++ N V+L+ VL A A G GK +H V K
Sbjct: 244 NGCFDEAFGFFRELLRE-EIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGS 302
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V ++ID Y KCG V +AR F M +++ SWT++IAG MH EA+ LF++M ++
Sbjct: 303 VNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEES 362
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
GVRP+ ITF+S+L ACSH+GLV+EG + M + + IEP +EHYGCMVDL GRA +L++
Sbjct: 363 GVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQK 422
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
AY+ I M V + ++W +LLGAC IH N+++ E+ +L E++P+N G HVLLSN+YA
Sbjct: 423 AYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAV 482
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
AG+W+DV R M + KTPG+S++E+ ++ F+ G+K + E+ +E L E+ ++
Sbjct: 483 AGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLR 542
Query: 566 LQ-EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
L+ E GY + SV+HD+++EEKE ++ HSEKLA NLRVCGD
Sbjct: 543 LRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGD 602
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CHTV++LISKV EI+VRD RFH FKDG CSC DYW
Sbjct: 603 CHTVMKLISKVYQVEIIVRDRSRFHSFKDGFCSCRDYW 640
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 141/368 (38%), Gaps = 79/368 (21%)
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGV-GNTLID-AYARGGHVDVSRKVFD 247
A S+LS CS + T+ H + K G ++ V G L+ A + + ++F
Sbjct: 4 AWVSLLSKCSSLKP---TKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFH 60
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
D N++I + + +L F Q+ + + ++ T + L A+A+ LR
Sbjct: 61 HFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLR 120
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV----------- 356
G +H Q + + + VGT++I MY +CG AR+ F++M E NV
Sbjct: 121 PGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAF 180
Query: 357 --------------------RSWTAMIAGYGMHCRAREALDLFYKM-------------- 382
SW M+AGY A +FY+M
Sbjct: 181 RCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVG 240
Query: 383 -----------------IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
++ +R N ++ VLSAC+ AG + G + H F +
Sbjct: 241 FAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFG-----KILHGFVEKA 295
Query: 426 GVEHYG----CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
G + G ++D + G + A + + M V V W S++ +H GE A
Sbjct: 296 GFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMH---GCGEEA 352
Query: 482 AKKLFELE 489
+ E+E
Sbjct: 353 IQLFHEME 360
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/636 (38%), Positives = 362/636 (56%), Gaps = 40/636 (6%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ +V +WN++++ L + G EA++ M L + P TF A+ +CS L L G++
Sbjct: 81 RGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGRE 140
Query: 95 AHQQAFIFG---FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
H A++ + FV+SAL+DMY+ ++ AR++FD +P + + W +M+ GY
Sbjct: 141 MH--AYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGY 198
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVD-SVAIASVLSACSRVTVNGVTEGA 210
Q EAL LF E+E G FV +ASVL AC+R E
Sbjct: 199 AQAGMDEEALRLFARM---EAEAG---------FVPCETTMASVLPACARSEAFAGKEAV 246
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG+V+KRG V N L+D YAR G DV+R++F + D V+WN++I G
Sbjct: 247 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 306
Query: 271 AEALDVFDQM--VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
A+A + +M ++ V NA+TL +L A L GK IH ++ L+ V VG
Sbjct: 307 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVG 366
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-V 387
++++DMY KCG + L+R F+++ +N +W +I YGMH EA LF +M +G
Sbjct: 367 SALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 426
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
RPN +TF++ L+ACSH+G+V G + M + +EP + C+VD+LGRAG+L EAY
Sbjct: 427 RPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAY 486
Query: 448 DLIEGMKVKADFV-VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
++ M+ V W ++LGACR+H+NV LGEIA ++L ELEP ++VLL NIY+ A
Sbjct: 487 AMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAA 546
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
G+W RS M+ R +AK PG S +E+ G +H F+ G+ HP E+++ ++E L ++
Sbjct: 547 GQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEM 606
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
GY D + V+HD+D +K LR HSEKLA NLRVC DCH
Sbjct: 607 VARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCH 666
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +SK+V REIV+RD +RFH+F++G CSCGDYW
Sbjct: 667 EAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 176/366 (48%), Gaps = 44/366 (12%)
Query: 51 GGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH----QQAFIFGFHR 106
GG + + S +R +S P +A + G++AH + + G R
Sbjct: 4 GGHPLTSFTLVSVLRAVSHLP------------AAAAAVRLGREAHAFALKNGLLHGHQR 51
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
F +AL+ MY++ G ++DA++LF ++V+W +M++ VQ+ EA+ +
Sbjct: 52 --FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYD 109
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG-- 224
+ + V D V AS L ACSR+ + V H +VIK D E+
Sbjct: 110 MV------------ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK---DDELAAN 154
Query: 225 --VGNTLIDAYARGGHVDVSRKVFDGMIE--KDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
V + L+D YA V +R+VFD + + K WN++I YAQ G+ EAL +F +M
Sbjct: 155 SFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARM 214
Query: 281 -VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
++ V C T+++VL A A + +H V+K + + V +++DMY + G
Sbjct: 215 EAEAGFVPCE-TTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLG 273
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK---AGVRPNYITFVS 396
+ D+AR+ F + +V SW +I G + +A L +M + GV PN IT ++
Sbjct: 274 KTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMT 333
Query: 397 VLSACS 402
+L C+
Sbjct: 334 LLPGCA 339
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 250/665 (37%), Positives = 378/665 (56%), Gaps = 55/665 (8%)
Query: 2 KLSKSSSVS--SVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
K+ + +++S +VS K+ + +F+K ++N V SW S++ + G EA
Sbjct: 72 KMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERN-VVSWTSMVRGYVQEGLIDEAEL 130
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
F M P ++ + + D + ++ F +DV S+ +I
Sbjct: 131 LFWRM------PEKNVVSWTVMLGGLIEDGRVDEA--RRLFDMIPVKDVVASTNMIGGLC 182
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
G LS+AR++FDE+PQR N+V+WTSM++GY N+ A LF E + +++E
Sbjct: 183 SEGRLSEAREIFDEMPQR--NVVAWTSMISGYAMNNKVDVARKLF-EVMPDKNE------ 233
Query: 180 NSDNVFVDSVAIASVLSACSRV-TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
V ++L +R +N E +K V N +I + G
Sbjct: 234 ---------VTWTAMLKGYTRSGRINEAAELFKAMPVK-----PVAACNGMIMGFGLNGE 279
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
V +R VFD M EKD TW+++I IY + G EAL +F M + V+ N ++ ++L
Sbjct: 280 VGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLM-QREGVRPNFPSIISILS 338
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
L L G+ +H Q+++ + + V + +I MY KCG + ++ F++ K++
Sbjct: 339 VCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVM 398
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
W ++IAGY H +AL++F++M +G P+ ITF+ VLSAC + G V+EG +M
Sbjct: 399 WNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMK 458
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
++ ++ EHY CMVDLLGRAGKL EA +LIE M V+AD +VWG+LL ACR HKN+DL
Sbjct: 459 SKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLA 518
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
EIAAKKL +LEP++ G ++LLSN+YA+ RW+DV R M+ R ++K+PG S +E+ K
Sbjct: 519 EIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNK 578
Query: 539 VHAFL-VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
VH F G HP+HE I + LE+L L+E GY D + V+HDVD+E+K +LR HSEK
Sbjct: 579 VHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEK 638
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
+A NLRVCGDCH+ I+LI++V REI++RD+ RFH+FKDGLCS
Sbjct: 639 MAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCS 698
Query: 640 CGDYW 644
C D+W
Sbjct: 699 CRDFW 703
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 169/390 (43%), Gaps = 89/390 (22%)
Query: 105 HRDVFVSSALIDM-----YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
+R F SSA I +++ G++ AR +FD++ + + + SW +++ GY N E
Sbjct: 8 YRSYFSSSAAITQCQISYFARLGQIDRARNIFDDL--QSKTVTSWNAIVAGYFHNKRPAE 65
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A LF + + + ++ NG
Sbjct: 66 AQKLFDK----------------------------MPERNTISWNG-------------- 83
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
L+ Y + G + +RKVFD M E++ V+W S++ Y Q GL EA +F +
Sbjct: 84 ---------LVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWR 134
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M + N V+ + +L + G + + + D + D V+ T++I C G
Sbjct: 135 MPEK-----NVVSWTVMLGGLIEDGRVDEARRLFDMIPVKD----VVASTNMIGGLCSEG 185
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
++ AR+ F++M ++NV +WT+MI+GY M+ + A LF M N +T+ ++L
Sbjct: 186 RLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDK----NEVTWTAMLK 241
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
+ +G + E M ++P V M+ G G++ +A + + MK K D
Sbjct: 242 GYTRSGRINEAAELFKAM----PVKP-VAACNGMIMGFGLNGEVGKARWVFDQMKEKDDG 296
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
W +L+ +I +K FELE
Sbjct: 297 -TWSALI------------KIYERKGFELE 313
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 129/294 (43%), Gaps = 61/294 (20%)
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
F S + I +AR G +D +R +FD + K +WN+I+A Y N AEA +FD
Sbjct: 12 FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
+M + + N ++ Y K
Sbjct: 72 KMPERNTISWNG----------------------------------------LVSGYVKN 91
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G + ARK F++M E+NV SWT+M+ GY EA LF++M + N +++ +L
Sbjct: 92 GMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEK----NVVSWTVML 147
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEP--GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
GL+++G ++ F++ P V M+ L G+L EA ++ + M +
Sbjct: 148 -----GGLIEDG--RVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQR 200
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP--NNCGYHVLLSNIYANAGR 508
+ V W S++ ++ VD+ A+KLFE+ P N + +L Y +GR
Sbjct: 201 -NVVAWTSMISGYAMNNKVDV----ARKLFEVMPDKNEVTWTAMLKG-YTRSGR 248
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/632 (38%), Positives = 363/632 (57%), Gaps = 38/632 (6%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMR--KLSLTPTRSTFPCAIKSCSALHDLHS 91
+ NV SWN++I+ + GD EA M+ + T + +C L S
Sbjct: 310 NNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRS 369
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K+ H +F F V +S+A I Y+KCG L+ A K+F I + + SW +++ G+
Sbjct: 370 LKELHGYSFRHCFQH-VELSNAFILAYAKCGALNSAEKVFHGIGDK--TVSSWNALIGGH 426
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
QN + R+AL L + + D I+S+L AC+ + + H
Sbjct: 427 AQNGDPRKALHLLFQMTYSGQQ------------PDWFTISSLLLACAHLKSLQYGKEIH 474
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
G+V++ G +++ VG +L+ Y G +R +FD M +K+ V+WN++I+ Y+QNGL
Sbjct: 475 GYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPY 534
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
E+L +F + + S ++ + + + +V A + L LRLGK H V+K E VG SI
Sbjct: 535 ESLALFRKSL-SEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSI 593
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
IDMY K G + +RK F+ +K+KNV SW A+I +G+H +EA++L+ +M K G P+
Sbjct: 594 IDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDR 653
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFN-IEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
T++ +L AC HAGLV+EG + M FN IEP +EHY C++D+L RAG+L +A L+
Sbjct: 654 FTYIGILMACGHAGLVEEGLKYFKEM-QNFNLIEPKLEHYACLIDMLARAGRLDDALRLV 712
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
M +AD +W SLL +CR +++GE AKKL ELEP+ +VLLSN+YA G+W+
Sbjct: 713 NEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWD 772
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
V R R +MK L K G S +E+ G+V++F+VGD P+ +I L ++ E+G
Sbjct: 773 GVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIG 832
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
Y + +SV+H+V +EEK LR HSEKLA NLR+C DCH +
Sbjct: 833 YKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAK 892
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
LISK V+REIVVRD+KRFH+F+DGLCSC DYW
Sbjct: 893 LISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 138/444 (31%), Positives = 231/444 (52%), Gaps = 21/444 (4%)
Query: 32 YVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSALHDLH 90
++ + N+ SWNS+I + G S ++ M + L P T + C+ ++
Sbjct: 206 FMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVD 265
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G H A G +V V++A++ MYSKCG L++A+ F + +N+VSW +M++
Sbjct: 266 IGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSF--VKNNNKNVVSWNTMISA 323
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC-SRVTVNGVTEG 209
+ + EA L +E ++ E + + V I +VL AC ++ + + E
Sbjct: 324 FSLEGDVNEAFNLLQEMQIQGEE----------MKANEVTILNVLPACLDKLQLRSLKE- 372
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG+ + F V + N I AYA+ G ++ + KVF G+ +K +WN++I +AQNG
Sbjct: 373 LHGYSFRHCF-QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGD 431
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
+AL + QM S + + T+S++LLA AHL L+ GK IH V++ LE VGT
Sbjct: 432 PRKALHLLFQMTYSGQ-QPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGT 490
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
S++ Y CG+ AR F++MK+KN+ SW AMI+GY + E+L LF K + G++
Sbjct: 491 SLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQS 550
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC-MVDLLGRAGKLKEAYD 448
+ I VSV ACS ++ G + E GC ++D+ ++G +KE+
Sbjct: 551 HEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAF--VGCSIIDMYAKSGCIKESRK 608
Query: 449 LIEGMKVKADFVVWGSLLGACRIH 472
+ +G+K K + W +++ A IH
Sbjct: 609 VFDGLKDK-NVASWNAIIVAHGIH 631
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 196/380 (51%), Gaps = 16/380 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHS 91
++ N+ WN++++ R G + ++ F + P TFP IK+C + D+
Sbjct: 105 METKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRL 164
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ H G DVFV +AL+ MY KCG + +A K+FD +P+ N+VSW SM+ +
Sbjct: 165 GEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPE--TNLVSWNSMICAF 222
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+N +R++ L E L EE + D V + ++L C+ + G H
Sbjct: 223 SENGFSRDSFDLLMEMLGEEG-----------LLPDVVTVVTILPVCAGEGEVDIGMGIH 271
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
G +K G EV V N ++ Y++ G+++ ++ F K+ V+WN++I+ ++ G
Sbjct: 272 GLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVN 331
Query: 272 EALDVFDQM-VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA ++ +M ++ ++K N VT+ VL A LR K +H + + V + +
Sbjct: 332 EAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQH-VELSNA 390
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
I Y KCG ++ A K F+ + +K V SW A+I G+ + R+AL L ++M +G +P+
Sbjct: 391 FILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPD 450
Query: 391 YITFVSVLSACSHAGLVQEG 410
+ T S+L AC+H +Q G
Sbjct: 451 WFTISSLLLACAHLKSLQYG 470
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 176/328 (53%), Gaps = 22/328 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFG---FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
+++C D+ +G++ H+ F+ + D +++ LI MY+ CG D+R +FD +
Sbjct: 50 LQACGNQKDIETGRRLHK--FVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNM-- 105
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF-VDSVAIASVL 195
+N++ W ++++GY +N + + +F + + SD F D+ SV+
Sbjct: 106 ETKNLIQWNALVSGYTRNGLYGDVVKVFMDLV------------SDTDFQPDNFTFPSVI 153
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
AC + + E HG VIK G +V VGN L+ Y + G VD + KVFD M E + V
Sbjct: 154 KACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLV 213
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+WNS+I +++NG + ++ D+ +M+ + + VT+ +L A G + +G IH
Sbjct: 214 SWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGL 273
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+K+ L E V+V +++ MY KCG ++ A+ +F + KNV SW MI+ + + EA
Sbjct: 274 AVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEA 333
Query: 376 LDLFYKMIKAG--VRPNYITFVSVLSAC 401
+L +M G ++ N +T ++VL AC
Sbjct: 334 FNLLQEMQIQGEEMKANEVTILNVLPAC 361
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/598 (38%), Positives = 352/598 (58%), Gaps = 35/598 (5%)
Query: 58 LRAFSSMRKLSLTPT-RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
LR S+ + S P R + +K C+ L G+ H F D+ + + L++
Sbjct: 44 LRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLN 103
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY+KCG L +ARK+F+++PQR + V+WT++++GY Q+D +ALL F + L G
Sbjct: 104 MYAKCGSLEEARKVFEKMPQR--DFVTWTTLISGYSQHDRPCDALLFFNQMLR-----FG 156
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
S N ++SV+ A + HGF +K GFDS V VG+ L+D Y R
Sbjct: 157 YSPNE-------FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRY 209
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G +D ++ VFD + ++ V+WN++IA +A+ +AL++F M++ + + + +++
Sbjct: 210 GLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD-GFRPSHFSYASL 268
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
A + G L GK +H +IK + G +++DMY K G + ARK F+++ +++V
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW +++ Y H +EA+ F +M + G+RPN I+F+SVL+ACSH+GL+ EGWH+
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M + I P HY +VDLLGRAG L A IE M ++ +W +LL ACR+HKN +
Sbjct: 389 MKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
LG AA+ +FEL+P++ G HV+L NIYA+ GRW D R R MK + K P S VE+
Sbjct: 448 LGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIE 507
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
+H F+ D+ HPQ E+I EE+ K++E+GYV D + VI VDQ+E+E+ L+ HSE
Sbjct: 508 NAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSE 567
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDG 636
K+A N+RVCGDCHT I+L SKVV REI+VRD+ RFH+FKD
Sbjct: 568 KIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 169/343 (49%), Gaps = 17/343 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F K ++ V +W ++I+ ++ +AL F+ M + +P T IK+ +A
Sbjct: 117 VFEKMPQRDFV-TWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G Q H GF +V V SAL+D+Y++ G + DA+ +FD + RN VSW ++
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES--RNDVSWNAL 233
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + +AL LF+ L D + AS+ ACS
Sbjct: 234 IAGHARRSGTEKALELFQGML------------RDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H ++IK G GNTL+D YA+ G + +RK+FD + ++D V+WNS++ YAQ+
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 341
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EA+ F++M + ++ N ++ +VL A +H G+L G ++ + K +
Sbjct: 342 GFGKEAVWWFEEM-RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWH 400
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+++D+ + G ++ A + +M E W A++ MH
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 254/664 (38%), Positives = 365/664 (54%), Gaps = 64/664 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHS 91
+ + N++SWN +I LA D ++++ F M S P + TFP IK+ +
Sbjct: 199 IPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLV 258
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
GK H A F DVFV ++LI Y+ CG L A +F+ I ++IVSW SM+TG+
Sbjct: 259 GKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGF 318
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR----------- 200
VQ +AL LF+ ++ V ++V + SV+SAC++
Sbjct: 319 VQGGYPDKALDLFERM------------RNEGVHPNAVTMVSVMSACAKTMNLTLGRKVC 366
Query: 201 ---------VTVNGVTEGAHGFV------IKRG-FDS----EVGVGNTLIDAYARGGHVD 240
+ +N FV I RG FD+ +V T+ID YA+
Sbjct: 367 DYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHG 426
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM-VKSTDVKCNAVTLSAVLLA 299
++R +FD M KD WN +I+ Y Q+G EAL +F ++ + + + + VTL + L A
Sbjct: 427 IARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSA 486
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A LG + +G+ IH + K ++ + + TS+IDMY K G V+ A + F+ + K+V W
Sbjct: 487 CAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVW 546
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
+AMIAG MH R A++LF M + V+PN +TF ++L ACSH+GLV EG + M
Sbjct: 547 SAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMER 606
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
+ + P +HY CMVD+LGRAG L+EA IEGM + VWG+LLGAC IH N++L E
Sbjct: 607 VYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAE 666
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
A +L E+EP N G +VLLSN+YA G WE V R M++ L K G S +E+ G V
Sbjct: 667 KACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTV 726
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE-KEMTLRIHSEKL 598
H F+VGD HP IY L+E+ +L+ GYV + ++ V++EE KE L++HSEK+
Sbjct: 727 HEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKM 786
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVC DCHTV +++SKV R+IV+RD RFH+F G CSC
Sbjct: 787 AIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSC 846
Query: 641 GDYW 644
DYW
Sbjct: 847 QDYW 850
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 237/482 (49%), Gaps = 68/482 (14%)
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YS 119
SS S T T + C++ L KQ H Q D + +S L +S
Sbjct: 128 SSPTPASATATNVGDRALFQQCTSFKQL---KQIHAQMLRTNKLHDPYAASELFTAAAFS 184
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
L ARK+FD+IPQ N+ SW ++ + + +++L+F +L +S G
Sbjct: 185 SFSALDYARKVFDQIPQ--PNLYSWNILIRALATSSDPIQSVLVFIR-MLHDSPFG---- 237
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
N F V I +V A R + G + HG IK F +V V N+LI YA GH+
Sbjct: 238 --PNKFTFPVLIKAV--AERRCFLVG--KAVHGMAIKTSFGDDVFVLNSLIHFYASCGHL 291
Query: 240 DVSRKVFDGMIE---KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
D++ VF+ MIE KD V+WNS++ + Q G +ALD+F++M ++ V NAVT+ +V
Sbjct: 292 DLAYLVFE-MIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERM-RNEGVHPNAVTMVSV 349
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
+ A A L LG+ + D + + ++ ++ V + IDM+ KCG+V++AR F+ M++++V
Sbjct: 350 MSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDV 409
Query: 357 RSWTA-------------------------------MIAGYGMHCRAREALDLF--YKMI 383
SWT +I+GY R +EAL +F ++
Sbjct: 410 VSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLT 469
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
K+G RP+ +T +S LSAC+ G + G W++ + I+ ++D+ ++G +
Sbjct: 470 KSGARPDQVTLLSTLSACAQLGAMDIG-EWIHGYIKKERIQLNRNLATSLIDMYSKSGDV 528
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF------ELEPNNCGYHV 497
++A ++ + K D VW +++ +H GE AA +LF +++PN+ +
Sbjct: 529 EKAIEVFHSIGNK-DVFVWSAMIAGLAMHGR---GE-AAIELFLDMQETQVKPNSVTFTN 583
Query: 498 LL 499
LL
Sbjct: 584 LL 585
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 140/287 (48%), Gaps = 23/287 (8%)
Query: 232 AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
A++ +D +RKVFD + + + +WN +I A + +++ VF +M+ + N
Sbjct: 182 AFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKF 241
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
T ++ A+A +GK +H IK + V V S+I Y CG +DLA F +
Sbjct: 242 TFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMI 301
Query: 352 K--EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
+ K++ SW +M+ G+ +ALDLF +M GV PN +T VSV+SAC+ +
Sbjct: 302 EGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTL 361
Query: 410 G-----WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGS 464
G + N M N+ +D+ + G+++ A L + M+ K D V W +
Sbjct: 362 GRKVCDYIDRNEMMMNLNV------CNATIDMFVKCGEVEIARGLFDNME-KRDVVSWTT 414
Query: 465 LL-GACRIHKNVDLGEIAAKKLFELEPNN--CGYHVLLSNIYANAGR 508
++ G ++ ++ A+ +F+ P ++VL+S Y +GR
Sbjct: 415 IIDGYAKMSEHG-----IARDIFDSMPRKDIPAWNVLISG-YEQSGR 455
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/694 (36%), Positives = 389/694 (56%), Gaps = 96/694 (13%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S +S+V+ +++ LF+K ++N V SWN +I+ + EA +AF +M +
Sbjct: 49 SWNSMVAGYFQNNRPREARYLFDKMPERNTV-SWNGLISGYVKNRMVSEARKAFDTMPER 107
Query: 68 SLT-------------------------PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIF 102
++ P ++ + L L ++ + +F
Sbjct: 108 NVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTV----MLGGLIQVRRIDEARGLF 163
Query: 103 GFH--RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
+DV + +I Y + G L++AR+LFDE+P+R N++SWT+M++GYVQN A
Sbjct: 164 DIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRR--NVISWTTMISGYVQNGQVDVA 221
Query: 161 LLLFKEFLLEESEC-----------GGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
LF E + E++E GG E + +F D++ + +V+ AC
Sbjct: 222 RKLF-EVMPEKNEVSWTAMLMGYTQGGRIEEASELF-DAMPVKAVV-AC----------- 267
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
N +I + + G V +R+VFD + EKD TW+++I +Y + G
Sbjct: 268 -----------------NAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGF 310
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EAL++F +++ V+ N +L +VL A L L G+ +H +++K + V V +
Sbjct: 311 EVEALNLF-ALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVAS 369
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+I MY KCG + AR+ F++ K++ W ++I GY H EAL +F++M +G+
Sbjct: 370 VLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMAT 429
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ +TFV VLSACS+ G V+EG +M ++ +EP EHY CMVDLLGRAG + +A DL
Sbjct: 430 DGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDL 489
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I+ M V+AD ++WG+LLGACR H N++L E+AAKKL +LEP N G ++LLSNIYA+ GRW
Sbjct: 490 IQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRW 549
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG-DKEHPQHEKIYEYLEELNVKLQE 568
DV R M+ ++++K+PG S +E+ +VH F G +HP+ I + LE+L+ L+E
Sbjct: 550 GDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLRE 609
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
GY D + V+HDVD+EEK +L HSE+LA NLRVCGDCH+
Sbjct: 610 AGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSA 669
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+LI+K+ REI++RD+ RFH+FKDG CSC DYW
Sbjct: 670 IKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 193/453 (42%), Gaps = 71/453 (15%)
Query: 39 FSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQ 98
++NS IA AR G A R F M P + + S + + +
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEM------PDKGI----VSWNSMVAGYFQNNRPREA 66
Query: 99 AFIFG--FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
++F R+ + LI Y K +S+ARK FD +P+R N+VSWT+M+ GYVQ
Sbjct: 67 RYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPER--NVVSWTAMVRGYVQEGL 124
Query: 157 AREALLLF-----KEFLLEESECGGASE----NSDNVFVDSVAIASVLSACSRVTVNGVT 207
EA LF K + GG + + D + + V++ + ++G
Sbjct: 125 VSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTN--MISGYC 182
Query: 208 EGAHGFVIKRGFDS----EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ + FD V T+I Y + G VDV+RK+F+ M EK+ V+W +++
Sbjct: 183 QEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMG 242
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y Q G EA ++FD M V CNA+ L
Sbjct: 243 YTQGGRIEEASELFDAMPVKAVVACNAMILG----------------------------- 273
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ + G+V AR+ F+Q++EK+ +W+AMI Y EAL+LF M
Sbjct: 274 -----------FGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQ 322
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ GV+ N+ + +SVLS C+ + G ++ + + V ++ + + G L
Sbjct: 323 REGVQSNFPSLISVLSVCASLASLDHG-RQVHAELVKSQFDSDVFVASVLITMYVKCGDL 381
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
+A + + K D V+W S++ H V+
Sbjct: 382 VKARQIFDRFSPK-DIVMWNSIITGYAQHGLVE 413
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 30/262 (11%)
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
A+ +NS IA YA+ G A VFD+M V N +++ R + +
Sbjct: 16 AIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWN-----SMVAGYFQNNRPREARYLF 70
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
D++ E + + +I Y K V ARKAF+ M E+NV SWTAM+ GY
Sbjct: 71 DKMP----ERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVS 126
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP--GVEHYG 431
EA LF++M + N +++ +L GL+Q ++ F+I P V
Sbjct: 127 EAETLFWQMPEK----NVVSWTVML-----GGLIQV--RRIDEARGLFDIMPVKDVVART 175
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP- 490
M+ + G+L EA +L + M + + + W +++ + VD+ A+KLFE+ P
Sbjct: 176 NMISGYCQEGRLAEARELFDEMP-RRNVISWTTMISGYVQNGQVDV----ARKLFEVMPE 230
Query: 491 -NNCGYHVLLSNIYANAGRWED 511
N + +L Y GR E+
Sbjct: 231 KNEVSWTAMLMG-YTQGGRIEE 251
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/629 (38%), Positives = 358/629 (56%), Gaps = 54/629 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V S+ S++ R G +A+R F M P R+ + L L + +
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQM------PERNH----VSYTVLLGGLLDAGRVN 160
Query: 97 QQAFIFG--FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
+ +F RDV +A++ Y + G +++AR LFDE+P+R N+VSWT+M++GY QN
Sbjct: 161 EARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKR--NVVSWTAMISGYAQN 218
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
A LF E + E +E + + V + V A N + E
Sbjct: 219 GEVNLARKLF-EVMPERNEVSWTA-----MLVGYIQAGHVEDAAE--LFNAMPE------ 264
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
V N ++ + + G VD ++ VF+ M E+D TW+++I Y QN EAL
Sbjct: 265 ------HPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEAL 318
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
F +M+ V+ N ++ ++L A L VL G+ +H +++ + V +++I M
Sbjct: 319 STFREMLWR-GVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITM 377
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y KCG +D A++ F+ + K++ W +MI GY H +AL +F+ M AG+ P+ IT+
Sbjct: 378 YIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITY 437
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
+ L+ACS+ G V+EG N+M +I PG EHY CMVDLLGR+G ++EA+DLI+ M
Sbjct: 438 IGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMP 497
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
V+ D V+WG+L+GACR+H+N ++ E+AAKKL ELEP N G +VLLS+IY + GRWED +
Sbjct: 498 VEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASK 557
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD-KEHPQHEKIYEYLEELNVKLQEVGYVT 573
R + +R L K+PG S +E +VH F GD HP+H I LE+L+ L E GY
Sbjct: 558 MRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSA 617
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
D + V+HD+D+E+K +LR HSE+ A NLRVCGDCH+ I+LI+
Sbjct: 618 DGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIA 677
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
K+ REIV+RD+ RFH+FKDG CSC DYW
Sbjct: 678 KITSREIVLRDANRFHHFKDGFCSCRDYW 706
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 182/415 (43%), Gaps = 62/415 (14%)
Query: 112 SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
+A I ++ G + AR F+ +P +R S+ ++L GY +N AL LF+ +
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMP--LRTTASYNALLAGYFRNRLPDAALGLFRRMPSRD 78
Query: 172 -----SECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVI--------- 215
+ G S + + A+AS+ S V+ + G HG +
Sbjct: 79 LASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM 138
Query: 216 -KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+R S + L+DA G V+ +R++FD M ++D V W ++++ Y Q G EA
Sbjct: 139 PERNHVSYTVLLGGLLDA----GRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEAR 194
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD-------------------- 314
+FD+M K N V+ +A++ A G + L + + +
Sbjct: 195 ALFDEMPKR-----NVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA 249
Query: 315 -------QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
++ E V +++ + + G VD A+ F +M+E++ +W+AMI Y
Sbjct: 250 GHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYE 309
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH-EFNIEPG 426
+ EAL F +M+ GVRPNY + +S+L+ C+ ++ G M F+++
Sbjct: 310 QNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMD-- 367
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
V ++ + + G L +A + + K D V+W S++ H LGE A
Sbjct: 368 VFAVSALITMYIKCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQH---GLGEQA 418
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 161/352 (45%), Gaps = 32/352 (9%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
T LF++ + K NV SW ++I+ A+ G+ A + F M P R+
Sbjct: 191 TEARALFDE-MPKRNVVSWTAMISGYAQNGEVNLARKLFEVM------PERNEVSWTAML 243
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
+ H A + F V +A++ + + G + A+ +F+++ R R+
Sbjct: 244 VGYIQAGHVEDAA--ELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKM--RERDDG 299
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
+W++M+ Y QN+ EAL F+E L G N +V S+L+ C+ +
Sbjct: 300 TWSAMIKAYEQNEFLMEALSTFREMLWR-----GVRPNYPSVI-------SILTVCAALA 347
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
V H +++ FD +V + LI Y + G++D +++VF KD V WNS+I
Sbjct: 348 VLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMIT 407
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
YAQ+GL +AL +F M + + + +T L A ++ G ++ G+ I + M +
Sbjct: 408 GYAQHGLGEQALGIFHDM-RLAGMSPDGITYIGALTACSYTGKVKEGREIFNS---MTVN 463
Query: 323 ESVIVG----TSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
S+ G + ++D+ + G V+ A M E + W A++ MH
Sbjct: 464 SSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/629 (37%), Positives = 357/629 (56%), Gaps = 54/629 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V S+ S++ R G +A+R F M P R+ + L L + +
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQM------PERNH----VSYTVLLGGLLDAGRVN 160
Query: 97 QQAFIFG--FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
+ +F RDV +A++ Y + G +++AR LFDE+P+R N+VSWT+M++GY QN
Sbjct: 161 EARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKR--NVVSWTAMISGYAQN 218
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
A LF E + E +E + + V + V A N + E
Sbjct: 219 GEVNLARKLF-EVMPERNEVSWTA-----MLVGYIQAGHVEDAAE--LFNAMPE------ 264
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
V N ++ + + G VD ++ VF+ M E+D TW+++I Y QN EAL
Sbjct: 265 ------HPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEAL 318
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
F +M+ V+ N ++ ++L A L VL G+ +H +++ + V +++I M
Sbjct: 319 STFREMLWR-GVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITM 377
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y KCG +D A++ F+ + K++ W +MI GY H +AL +F+ M AG+ P+ IT+
Sbjct: 378 YIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITY 437
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
+ L+ACS+ G V+EG N+M +I PG EHY CMVDLLGR+G ++EA+DLI+ M
Sbjct: 438 IGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMP 497
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
V+ D V+WG+L+GACR+H+N ++ E AAKKL ELEP N G +VLLS+IY + GRWED +
Sbjct: 498 VEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASK 557
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD-KEHPQHEKIYEYLEELNVKLQEVGYVT 573
R + +R L K+PG S +E +VH F GD HP+H I LE+L+ L E GY
Sbjct: 558 MRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSA 617
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
D + V+HD+D+E+K +LR HSE+ A NLRVCGDCH+ I+LI+
Sbjct: 618 DGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIA 677
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
K+ REI++RD+ RFH+FKDG CSC DYW
Sbjct: 678 KITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 181/415 (43%), Gaps = 62/415 (14%)
Query: 112 SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
+A I ++ G + AR F+ +P +R S+ ++L GY +N AL LF+ +
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMP--LRTTASYNALLAGYFRNRLPDAALGLFRRMPSRD 78
Query: 172 -----SECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVI--------- 215
+ G S + + A+AS+ S V+ + G HG +
Sbjct: 79 LASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM 138
Query: 216 -KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+R S + L+DA G V+ +R++FD M ++D V W ++++ Y Q G EA
Sbjct: 139 PERNHVSYTVLLGGLLDA----GRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEAR 194
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD-------------------- 314
+FD+M K N V+ +A++ A G + L + + +
Sbjct: 195 ALFDEMPKR-----NVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA 249
Query: 315 -------QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
++ E V +++ + + G VD A+ F +M E++ +W+AMI Y
Sbjct: 250 GHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYE 309
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH-EFNIEPG 426
+ EAL F +M+ GVRPNY + +S+L+ C+ ++ G M F+++
Sbjct: 310 QNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMD-- 367
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
V ++ + + G L +A + + K D V+W S++ H LGE A
Sbjct: 368 VFAVSALITMYIKCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQH---GLGEQA 418
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 161/352 (45%), Gaps = 32/352 (9%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
T LF++ + K NV SW ++I+ A+ G+ A + F M P R+
Sbjct: 191 TEARALFDE-MPKRNVVSWTAMISGYAQNGEVNLARKLFEVM------PERNEVSWTAML 243
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
+ H A + F V +A++ + + G + A+ +F+++ +R +
Sbjct: 244 VGYIQAGHVEDAA--ELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCER--DDG 299
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
+W++M+ Y QN+ EAL F+E L G N +V S+L+ C+ +
Sbjct: 300 TWSAMIKAYEQNEFLMEALSTFREMLWR-----GVRPNYPSVI-------SILTVCAALA 347
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
V H +++ FD +V + LI Y + G++D +++VF KD V WNS+I
Sbjct: 348 VLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMIT 407
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
YAQ+GL +AL +F M + + + +T L A ++ G ++ G+ I + M +
Sbjct: 408 GYAQHGLGEQALGIFHDM-RLAGMSPDGITYIGALTACSYTGKVKEGREIFNS---MTVN 463
Query: 323 ESVIVG----TSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
S+ G + ++D+ + G V+ A M E + W A++ MH
Sbjct: 464 SSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/630 (38%), Positives = 357/630 (56%), Gaps = 70/630 (11%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
+RKL L + +F ++SC+ L L K H DVF +S LI +
Sbjct: 9 LRKLELKNPKLSF---LESCTTLSHL---KIIHAHLIRAHTIFDVFAASCLISISINKNL 62
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L A ++F +I N+ + S + G+ + + ++ F ++ G +N
Sbjct: 63 LDYAAQVFYQIQNP--NLFIYNSFIRGFSGSKDPDKSF----HFYVQSKRNGLVPDNLTY 116
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYA--------- 234
F+ + AC++ + AHG +I+ GFDS+V V N+L+ Y+
Sbjct: 117 PFL--------VKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSAS 168
Query: 235 ----------------------RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ G V +RK+FD M EK+ VTW+ +I+ YA+N +
Sbjct: 169 YVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDK 228
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A++++ +++S V N + +V+ + AHLG L LG+ HD +++ + ++I+GT+++
Sbjct: 229 AIELY-FLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALV 287
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY +CG +D A F+Q+ ++ SWT +IAG+ MH A +AL+ F +M KAG+ P I
Sbjct: 288 DMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREI 347
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF +VLSACSH GLV+ G +M ++ IEP +EHYGCMVDLLGRAGKL EA +
Sbjct: 348 TFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNE 407
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M +K + +WG+LLGACRIHKN ++ E A K L EL+P + GY+VLLSNIYA +WE+V
Sbjct: 408 MPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENV 467
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
E R +MK R + K PG++L E+ GKVH F +GDK HP+ ++I EE+ K++ GY
Sbjct: 468 ENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYT 527
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
+ + D+D+EEKE + HSEKLA NLRVC DCHT +LI
Sbjct: 528 GNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIRIVKNLRVCEDCHTATKLI 587
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SKV +RE++VRD RFH+FK G CSC DYW
Sbjct: 588 SKVYERELIVRDRNRFHHFKGGACSCMDYW 617
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 186/370 (50%), Gaps = 48/370 (12%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ N+F +NS I + D ++ + ++ L P T+P +K+C+ L G
Sbjct: 73 IQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMG 132
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYS-------------------------------KC 121
QAH Q GF DV+V ++L+ MYS K
Sbjct: 133 IQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKS 192
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G+++ ARKLFD++P+ +N+V+W+ M++GY +N +A+ L+ FLL+ S
Sbjct: 193 GDVTSARKLFDKMPE--KNLVTWSVMISGYAKNSFFDKAIELY--FLLQ----------S 238
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
+ V + + SV+++C+ + + E AH ++++ + +G L+D YAR G +D
Sbjct: 239 EGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDK 298
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ VFD + +DA++W ++IA +A +G A +AL+ F +M K+ + +T +AVL A +
Sbjct: 299 AIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKA-GLTPREITFTAVLSACS 357
Query: 302 HLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSW 359
H G++ G + + + + +E + ++D+ + G++ A K N+M K N W
Sbjct: 358 HGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIW 417
Query: 360 TAMIAGYGMH 369
A++ +H
Sbjct: 418 GALLGACRIH 427
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/658 (36%), Positives = 371/658 (56%), Gaps = 45/658 (6%)
Query: 6 SSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR 65
SS VS V N + T K + NN + +I L RGG+ +A++
Sbjct: 23 SSHVSFVSLNASGYPT---------KDIKSNNN---DDLIQSLCRGGNLKQAVQLLCC-- 68
Query: 66 KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
PT+ TF I SC + L G H + G +D ++++ LI+MY G +
Sbjct: 69 --EPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVD 126
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
A K+FDE R + I W ++ + L+L+ + + G S +
Sbjct: 127 HACKVFDE--TREKTIFVWNAIFRALAMASRGEDLLVLYGQM----NWIGIPSNRFTYTY 180
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
V + S LS C + H +++ G++ V V TL+D YAR G+V + V
Sbjct: 181 VLKACVVSELSICPLRKGKEI----HAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSV 236
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD-QMVKSTDVKCNAVTLSAVLLAIAHLG 304
F M +K+ V+W+++IA YA+N + +AL++F M+++ D N +T+ +VL A A L
Sbjct: 237 FGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLA 296
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L GK +H V++ L+ ++ V ++I MY +CG++ ++ F+ MK+++V SW ++I+
Sbjct: 297 ALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLIS 356
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
YGMH ++A+ +F MI GV P+YITF++VL ACSHAGLV+E +M +++ I
Sbjct: 357 IYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIH 416
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
P +EHY CMVD+LGRA +L EA +LI+ M K VWGSLLG+CRIH NV+L E A+
Sbjct: 417 PRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAM 476
Query: 485 LFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLV 544
LFELEP N G +VLLS+IYA + W DV R R +++R L K P S +E++ K+++ +
Sbjct: 477 LFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVS 536
Query: 545 GDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----- 599
++ +PQ E++ +L L +++ GYV V +D+D+EEKE + HS KLA
Sbjct: 537 IEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGL 596
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH ++ +SK +REI++RD RFH FKDG+CSCGDYW
Sbjct: 597 INTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/625 (38%), Positives = 360/625 (57%), Gaps = 32/625 (5%)
Query: 38 VFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ 97
+ +W S+I L+ ++AL F+ MR P + TF + + +A + G+Q H
Sbjct: 210 IVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHS 269
Query: 98 QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA 157
GF ++FV +AL+DMY+KC ++ A ++FD++P+R N+VSW SM+ G+ N+
Sbjct: 270 LIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPER--NLVSWNSMIVGFFHNNLY 327
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
A+ +FK+ L E++ V + V+++SVLSAC+ + HG V+K
Sbjct: 328 DRAVGVFKDVLREKT-----------VIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKY 376
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
G V N+L+D Y + D K+F + ++D VTWN ++ + QN EA + F
Sbjct: 377 GLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYF 436
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
+++ + + + S VL + A L L G IHDQ+IK+ +++ + S+I MY K
Sbjct: 437 -WVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAK 495
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
CG + A + F +++ NV SWTAMI+ Y +H A + ++LF M+ G+ P+++TFV V
Sbjct: 496 CGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCV 555
Query: 398 LSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
LSACSH G V+EG N+M ++ PG EHY CMVDLLGRAG L EA IE M +K
Sbjct: 556 LSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKP 615
Query: 458 DFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRS 517
VWG+LLGACR + N+ +G AA++LFE+EP N G +VLL+N+ +GR E+ R
Sbjct: 616 TPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRR 675
Query: 518 LMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTS 577
LM + K PG S ++++ F D+ H ++IY+ LE+L +++ GYV +
Sbjct: 676 LMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEF 735
Query: 578 VIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVD 619
V + +++ E+E L HSEKLA NLR CG CHTV++L SK+ D
Sbjct: 736 VTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFD 795
Query: 620 REIVVRDSKRFHYFKDGLCSCGDYW 644
REI+VRD RFH F DG CSCGDYW
Sbjct: 796 REIIVRDINRFHRFADGFCSCGDYW 820
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 216/429 (50%), Gaps = 25/429 (5%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L Q H Q I + F+ + LI++Y+KCG L+ A LF + IV+WTS++
Sbjct: 158 LKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLI 217
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
T + +AL LF + C G N +S+LSA + + +
Sbjct: 218 THLSHFNMHLQALSLFNQM-----RCSGPYPN-------QFTFSSILSASAATMMVLHGQ 265
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H + K GFD+ + VG L+D YA+ + + +VFD M E++ V+WNS+I + N
Sbjct: 266 QLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNN 325
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
L A+ VF +++ V N V++S+VL A A++G L G+ +H V+K L V
Sbjct: 326 LYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVM 385
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
S++DMY KC D K F + +++V +W ++ G+ + + EA + F+ M + G+
Sbjct: 386 NSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGIL 445
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC----MVDLLGRAGKLK 444
P+ +F +VL + + + +G T H+ I+ G C ++ + + G L
Sbjct: 446 PDEASFSTVLHSSASLAALHQG-----TAIHDQIIKLGYVKNMCILGSLITMYAKCGSLV 500
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVD-LGEIAAKKLFE-LEPNNCGYHVLLSNI 502
+AY + EG++ + + W +++ A ++H + + E+ L E +EP++ + +LS
Sbjct: 501 DAYQVFEGIE-DHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSAC 559
Query: 503 YANAGRWED 511
++ GR E+
Sbjct: 560 -SHTGRVEE 567
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 20/234 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V +V +WN ++ + EA F MR+ + P ++F + S ++L LH G
Sbjct: 408 VGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQG 467
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H Q G+ +++ + +LI MY+KCG L DA ++F+ I N++SWT+M++ Y
Sbjct: 468 TAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIED--HNVISWTAMISAYQ 525
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG-AH 211
+ A + + LF+ L S+ + V VLSACS V EG AH
Sbjct: 526 LHGCANQVIELFEHML------------SEGIEPSHVTFVCVLSACSH--TGRVEEGLAH 571
Query: 212 GFVIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGMIEKDAVT-WNSIIA 262
+K+ D G + ++D R G +D +++ + M K + W +++
Sbjct: 572 FNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLG 625
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/629 (37%), Positives = 357/629 (56%), Gaps = 54/629 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V S+ S++ R G +A+R F M P R+ + L L + +
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQM------PERNH----VSYTVLLGGLLDAGRVN 160
Query: 97 QQAFIFG--FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
+ +F RDV +A++ Y + G +++AR LFDE+P+R N+VSWT+M++GY QN
Sbjct: 161 EARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKR--NVVSWTAMISGYAQN 218
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
A LF E + E +E + + V + V A N + E
Sbjct: 219 GEVNLARKLF-EVMPERNEVSWTA-----MLVGYIQAGHVEDAAE--LFNAMPE------ 264
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
V N ++ + + G VD ++ VF+ M E+D TW+++I Y QN EAL
Sbjct: 265 ------HPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEAL 318
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
F +M+ V+ N ++ ++L A L VL G+ +H +++ + V +++I M
Sbjct: 319 STFREMLWR-GVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITM 377
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y KCG +D A++ F+ + K++ W +MI GY H +AL +F+ M AG+ P+ IT+
Sbjct: 378 YIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITY 437
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
+ L+ACS+ G V+EG N+M +I PG EHY CMVDLLGR+G ++EA+DLI+ M
Sbjct: 438 IGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMP 497
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
V+ D V+WG+L+GACR+H+N ++ E AAKKL ELEP N G +VLLS+IY + GRWED +
Sbjct: 498 VEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASK 557
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD-KEHPQHEKIYEYLEELNVKLQEVGYVT 573
R + +R L K+PG S +E +VH F GD HP+H I LE+L+ L E GY
Sbjct: 558 MRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSA 617
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
D + V+HD+D+E+K +LR HSE+ A NLRVCGDCH+ I+LI+
Sbjct: 618 DGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIA 677
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
K+ REI++RD+ RFH+FKDG CSC DYW
Sbjct: 678 KITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 181/415 (43%), Gaps = 62/415 (14%)
Query: 112 SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
+A I ++ G + AR F+ +P +R S+ ++L GY +N AL LF+ +
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMP--LRTTASYNALLAGYFRNRLPDAALGLFRRMPSRD 78
Query: 172 -----SECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVI--------- 215
+ G S + + A+AS+ S V+ + G HG +
Sbjct: 79 LASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM 138
Query: 216 -KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+R S + L+DA G V+ +R++FD M ++D V W ++++ Y Q G EA
Sbjct: 139 PERNHVSYTVLLGGLLDA----GRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEAR 194
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD-------------------- 314
+FD+M K N V+ +A++ A G + L + + +
Sbjct: 195 ALFDEMPKR-----NVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA 249
Query: 315 -------QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
++ E V +++ + + G VD A+ F +M E++ +W+AMI Y
Sbjct: 250 GHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYE 309
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH-EFNIEPG 426
+ EAL F +M+ GVRPNY + +S+L+ C+ ++ G M F+++
Sbjct: 310 QNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMD-- 367
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
V ++ + + G L +A + + K D V+W S++ H LGE A
Sbjct: 368 VFAVSALITMYIKCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQH---GLGEQA 418
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 161/352 (45%), Gaps = 32/352 (9%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
T LF++ + K NV SW ++I+ A+ G+ A + F M P R+
Sbjct: 191 TEARALFDE-MPKRNVVSWTAMISGYAQNGEVNLARKLFEVM------PERNEVSWTAML 243
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
+ H A + F V +A++ + + G + A+ +F+++ +R +
Sbjct: 244 VGYIQAGHVEDAA--ELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCER--DDG 299
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
+W++M+ Y QN+ EAL F+E L G N +V S+L+ C+ +
Sbjct: 300 TWSAMIKAYEQNEFLMEALSTFREMLWR-----GVRPNYPSVI-------SILTVCAALA 347
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
V H +++ FD +V + LI Y + G++D +++VF KD V WNS+I
Sbjct: 348 VLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMIT 407
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
YAQ+GL +AL +F M + + + +T L A ++ G ++ G+ I + M +
Sbjct: 408 GYAQHGLGEQALGIFHDM-RLAGMSPDGITYIGALTACSYTGKVKEGREIFNS---MTVN 463
Query: 323 ESVIVG----TSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
S+ G + ++D+ + G V+ A M E + W A++ MH
Sbjct: 464 SSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/586 (39%), Positives = 336/586 (57%), Gaps = 40/586 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+++C+ D+ G+ H H + L+DMY+KCG L A +FD + +R
Sbjct: 5 LQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLM--SVR 62
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+V+WTS++ Y + + EA+ LF E + + V D I +VL AC+
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEM------------DREGVSPDIFTITTVLHACA 110
Query: 200 RVTVNGVTEGA---HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
NG E H ++ + S + V N L+D YA+ G ++ + VF M KD ++
Sbjct: 111 ---CNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIIS 167
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
WN++I Y++N L EAL +F MV ++K + TL+ +L A A L L GK +H +
Sbjct: 168 WNTMIGGYSKNSLPNEALSLFGDMV--LEMKPDGTTLACILPACASLASLDRGKEVHGHI 225
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
++ V +++DMY KCG LAR F+ + K++ +WT MIAGYGMH A+
Sbjct: 226 LRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAI 285
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDL 436
F +M +AG+ P+ ++F+S+L ACSH+GL+ EGW + N M E N++P +EHY C+VDL
Sbjct: 286 TTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDL 345
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYH 496
L R+GKL AY I+ M ++ D +WG+LL CRIH +V L E A+ +FELEP N GY+
Sbjct: 346 LARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYY 405
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
VLL+N YA A +WE+V++ R + R L K PG S +E++ KVH FL G+ HPQ +KI
Sbjct: 406 VLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIE 465
Query: 557 EYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------------- 599
L+ L K++E GY + + D +KE L HSEKLA
Sbjct: 466 VLLKRLRSKMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVS 525
Query: 600 -NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH + + ISK + REIV+RDS RFH+FKDG+C C +W
Sbjct: 526 KNLRVCGDCHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 173/339 (51%), Gaps = 26/339 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
V +W S+IA AR G S EA+R F M + ++P T + +C+ L +GK H
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
++FV +AL+DMY+KCG + DA +F E+P +++I+SW +M+ GY +N
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMP--VKDIISWNTMIGGYSKNSL 180
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EAL LF + +LE D +A +L AC+ + + HG +++
Sbjct: 181 PNEALSLFGDMVLEMKP-------------DGTTLACILPACASLASLDRGKEVHGHILR 227
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
GF S+ V N L+D Y + G ++R +FD + KD +TW +IA Y +G A+
Sbjct: 228 NGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITT 287
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVL----RLGKCIHDQV-IKMDLEESVIVGTSI 331
F++M + ++ + V+ ++L A +H G+L R + D+ +K LE I
Sbjct: 288 FNEM-RQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHY----ACI 342
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+D+ + G++ +A K M E + W A+++G +H
Sbjct: 343 VDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIH 381
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 119/220 (54%), Gaps = 2/220 (0%)
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+ S+L AC+ + HG +K + NTL+D YA+ G +D + VFD M
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+ VTW S+IA YA+ GL+ EA+ +F +M + V + T++ VL A A G L GK
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDRE-GVSPDIFTITTVLHACACNGSLENGK 119
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
+H+ + + D++ ++ V +++DMY KCG ++ A F +M K++ SW MI GY +
Sbjct: 120 DVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNS 179
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
EAL LF M+ ++P+ T +L AC+ + G
Sbjct: 180 LPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRG 218
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 95/176 (53%), Gaps = 2/176 (1%)
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
+ ++L A A+ G + LG+ +H +K + +++DMY KCG +D A F+ M
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
+ V +WT++IA Y + EA+ LF++M + GV P+ T +VL AC+ G ++ G
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
N + E +++ + ++D+ + G +++A + M VK D + W +++G
Sbjct: 121 VHNYI-RENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGG 174
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/606 (37%), Positives = 342/606 (56%), Gaps = 34/606 (5%)
Query: 57 ALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
LR + L PT + I +C+ +L + H D F+ ++LI
Sbjct: 46 GLRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIH 105
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY KCG +SDAR +FD IP R++VSWT ++TGY QND EAL L + L G
Sbjct: 106 MYCKCGAVSDARHVFDGIP--TRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSG 163
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
S L A G+ E H +K D +V VG+ L+D YAR
Sbjct: 164 ------------FTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARC 211
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
+D++ +VFD + K+ V+WN++IA +A+ G L F +M ++ T S+V
Sbjct: 212 QQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRN-GFGATHFTYSSV 270
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
A+A +G L G+ +H +IK + + V +I+ MY K G + ARK F+++ ++++
Sbjct: 271 FSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDL 330
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+W M+ + + +EA+ F ++ K G++ N ITF+SVL+ACSH GLV+EG + +
Sbjct: 331 VTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDM 390
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M ++N+EP ++HY VDLLGRAG LKEA + M ++ VWG+LLGACR+HKN
Sbjct: 391 M-KDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK 449
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
+G+ AA +FEL+P + G VLL NIYA+ G+W+D R R +MK + K P S VE+
Sbjct: 450 IGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIE 509
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
VH F+ D HP+ E+IY EE+N ++++ GYV + V+ + ++E+E L+ HSE
Sbjct: 510 NSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSE 569
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
K+A N+R+CGDCH+ R +S+V REIVVRD+ RFH+F +G C
Sbjct: 570 KIALAFALINMPAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSC 629
Query: 639 SCGDYW 644
SCGDYW
Sbjct: 630 SCGDYW 635
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 164/342 (47%), Gaps = 16/342 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ +V SW +I A+ EAL M + P+ TF +K+ A G
Sbjct: 123 IPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIG 182
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H A + DV+V SAL+DMY++C ++ A ++FD + +N VSW +++ G+
Sbjct: 183 EQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDS--KNEVSWNALIAGFA 240
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ + L+ F E + GA+ +SV SA +R+ H
Sbjct: 241 RKGDGETTLMKFAEM---QRNGFGATH---------FTYSSVFSALARIGALEQGRWVHA 288
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+IK G V NT++ YA+ G + +RKVFD + ++D VTWN+++ +AQ GL E
Sbjct: 289 HMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKE 348
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+ F++ ++ ++ N +T +VL A +H G+++ GK D + ++E + S +
Sbjct: 349 AVAHFEE-IRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFV 407
Query: 333 DMYCKCGQVDLARK-AFNQMKEKNVRSWTAMIAGYGMHCRAR 373
D+ + G + A F E W A++ MH A+
Sbjct: 408 DLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK 449
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 161/381 (42%), Gaps = 78/381 (20%)
Query: 32 YVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS 91
++D N SWN++IA AR GD L F+ M++ T T+ + + + L
Sbjct: 223 WLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQ 282
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ H G FV++ ++ MY+K G + DARK+FD + Q R++V+W +MLT +
Sbjct: 283 GRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQ--RDLVTWNTMLTAF 340
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
Q +EA+ F+E + ++ + SVL+ACS H
Sbjct: 341 AQYGLGKEAVAHFEEI------------RKYGIQLNQITFLSVLTACS-----------H 377
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM----IEKDAVTWNSIIAIYAQN 267
G ++K G ++ FD M +E + + S + + +
Sbjct: 378 GGLVKEG------------------------KQYFDMMKDYNVEPEIDHYVSFVDLLGRA 413
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL EAL +M ++ A A+L A ++G+ D V ++D E++
Sbjct: 414 GLLKEALIFVFKM----PMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDT--- 466
Query: 328 GTSII--DMYCKCGQVDLARKAFNQMKEKNVR-----SWTAM-------IAGYGMHCRAR 373
G ++ ++Y GQ D A + MK V+ SW + +A H ++
Sbjct: 467 GPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSE 526
Query: 374 EALDLF----YKMIKAGVRPN 390
E ++ ++ KAG PN
Sbjct: 527 EIYRMWEEVNTRIKKAGYVPN 547
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/575 (39%), Positives = 344/575 (59%), Gaps = 34/575 (5%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L + +Q H + G HR + + LI + G ++ AR+LF +P + + S+L
Sbjct: 104 LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNP--DSFLFDSLL 161
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
+ + + +L ++ L GA +++ SV+ AC+ ++ + +
Sbjct: 162 KVTSKFGFSIDTVLFYRRMLFS-----GAPQSN-------YTFTSVIKACADLSALRLGK 209
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H V+ G+ S++ V LI YA+ + V++KVFD M ++ + WNS+I+ Y QNG
Sbjct: 210 EIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNG 269
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
L E++ +F M++S + ++ T+ ++L + + LG L G +HD + +V++G
Sbjct: 270 LPQESIGLFHLMMES-GFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLG 328
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
TS+I+MY +CG V AR+ F+ MKE+NV +WTAMI+GYGMH R+A++LF +M G R
Sbjct: 329 TSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPR 388
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
PN ITFV+VLSAC+H+GL+ +G ++M + + PGVEH CMVD+ GRAG L +AY
Sbjct: 389 PNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQ 448
Query: 449 LIEGMKVK-ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I+ K VW S+LGACR+H+N DLG A+ + +EP N G++V+LSNIYA AG
Sbjct: 449 FIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAG 508
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
R + VE R++M RRL K G+S +E+ K + F +GDK HPQ IY YL+EL +
Sbjct: 509 RMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCS 568
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E GYV S++HD+++EE++ LR HSEKLA NLR+C DCH+
Sbjct: 569 ESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHS 628
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+ IS + DREI+VRD RFH+FKDG CSC DYW
Sbjct: 629 AIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 180/340 (52%), Gaps = 18/340 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V + F ++S++ ++ G S++ + + M + TF IK+C+ L L G
Sbjct: 149 VPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLG 208
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H + G+ D++V +ALI +Y+K ++ A+K+FD +PQ R I++W S+++GY
Sbjct: 209 KEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQ--RTIIAWNSLISGYD 266
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN +E++ LF L+ ES DS I S+LS+CS++ H
Sbjct: 267 QNGLPQESIGLFH--LMMES----------GFQPDSATIVSLLSSCSQLGALDFGCWLHD 314
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ GFD V +G +LI+ Y R G+V +R+VFD M E++ VTW ++I+ Y +G +
Sbjct: 315 YADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQ 374
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSI 331
A+++F +M ++ + N +T AVL A AH G++ G+ + + + L V +
Sbjct: 375 AMELFTEM-RAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCM 433
Query: 332 IDMYCKCGQVDLARKAFNQM--KEKNVRSWTAMIAGYGMH 369
+DM+ + G ++ A + + KE WT+M+ MH
Sbjct: 434 VDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMH 473
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/635 (36%), Positives = 366/635 (57%), Gaps = 36/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K K++V +WN++I A+ G +++ F M P + I++C
Sbjct: 279 VFSKMAVKDSV-TWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSG 336
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL GK H+ GF D + LIDMY+KCG+L A+++FD + ++ V+W S+
Sbjct: 337 DLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDT--TKCKDSVTWNSL 394
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY Q+ +E L FK +E DSV +LS S++
Sbjct: 395 INGYTQSGYYKEGLESFKMMKMERKP-------------DSVTFVLLLSIFSQLADINQG 441
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
G H VIK GF++E+ +GN+L+D YA+ G +D KVF M D ++WN++IA
Sbjct: 442 RGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHF 501
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+ ++M ++ + + T+ +L + L V R GK IH + K E +V +
Sbjct: 502 DDCTVGFQMINEM-RTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPI 560
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G ++I+MY KCG ++ K F MKEK+V +WTA+I+ +GM+ ++AL F M +GV
Sbjct: 561 GNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGV 620
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ + F++ + ACSH+G+V+EG + + M ++N+EP +EHY C+VDLL R+G L +A
Sbjct: 621 LPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAE 680
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ I M +K D +WG+LL ACR N ++ + +KK+ EL ++ GY+VL+SNIYA G
Sbjct: 681 EFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLG 740
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+W+ V+ R+ MK + L K PG S +E++ +V+ F GDK Q++K+ + LE L +
Sbjct: 741 KWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMA 800
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
+ GYV D+ +HDV++++K L HSE+LA NLRVCGDCHT
Sbjct: 801 KEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHT 860
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
V + I+K++ REI+VRD+ RFH FKDG CSCGD+W
Sbjct: 861 VTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/468 (29%), Positives = 238/468 (50%), Gaps = 33/468 (7%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
+SK + V +S+V ++F NNV+ WNS+I L G +AL ++
Sbjct: 61 ISKYAQVKDPISSV----------SVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYT 110
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
MR+ L P TFP I SC+ + DL G H+ A GF D+++ +ALIDMYS+
Sbjct: 111 EMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFV 170
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+L +AR +F+E+ R+ VSW S+++GY N +AL ++ +F +
Sbjct: 171 DLDNARYVFEEMSN--RDSVSWNSLISGYCSNGFWEDALDMYHKFRMT------------ 216
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+ D ++SVL AC ++ V EG HG + K G +V +GN L+ Y + +
Sbjct: 217 GMVPDCFTMSSVLLACG--SLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLR 274
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+R+VF M KD+VTWN++I YAQ G ++ +F M+ + +++++ + A
Sbjct: 275 EARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDG--FVPDMLSITSTIRAC 332
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
G L++GK +H +I E + +IDMY KCG + A++ F+ K K+ +W
Sbjct: 333 GQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWN 392
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
++I GY +E L+ F KM+K +P+ +TFV +LS S + +G ++ +
Sbjct: 393 SLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQG-RGIHCDVIK 450
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
F E + ++D+ + G++ + + M D + W +++ +
Sbjct: 451 FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISWNTVIAS 497
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/575 (39%), Positives = 344/575 (59%), Gaps = 34/575 (5%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L + +Q H + G HR + + LI + G ++ AR+LF +P + + S+L
Sbjct: 40 LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNP--DSFLFDSLL 97
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
+ + + +L ++ L GA +++ SV+ AC+ ++ + +
Sbjct: 98 KVTSKFGFSIDTVLFYRRMLFS-----GAPQSN-------YTFTSVIKACADLSALRLGK 145
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H V+ G+ S++ V LI YA+ + V++KVFD M ++ + WNS+I+ Y QNG
Sbjct: 146 EIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNG 205
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
L E++ +F M++S + ++ T+ ++L + + LG L G +HD + +V++G
Sbjct: 206 LPQESIGLFHLMMES-GFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLG 264
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
TS+I+MY +CG V AR+ F+ MKE+NV +WTAMI+GYGMH R+A++LF +M G R
Sbjct: 265 TSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPR 324
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
PN ITFV+VLSAC+H+GL+ +G ++M + + PGVEH CMVD+ GRAG L +AY
Sbjct: 325 PNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQ 384
Query: 449 LIEGMKVK-ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I+ K VW S+LGACR+H+N DLG A+ + +EP N G++V+LSNIYA AG
Sbjct: 385 FIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAG 444
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
R + VE R++M RRL K G+S +E+ K + F +GDK HPQ IY YL+EL +
Sbjct: 445 RMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCS 504
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E GYV S++HD+++EE++ LR HSEKLA NLR+C DCH+
Sbjct: 505 ESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHS 564
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+ IS + DREI+VRD RFH+FKDG CSC DYW
Sbjct: 565 AIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 180/340 (52%), Gaps = 18/340 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V + F ++S++ ++ G S++ + + M + TF IK+C+ L L G
Sbjct: 85 VPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLG 144
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H + G+ D++V +ALI +Y+K ++ A+K+FD +PQ R I++W S+++GY
Sbjct: 145 KEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQ--RTIIAWNSLISGYD 202
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN +E++ LF L+ ES DS I S+LS+CS++ H
Sbjct: 203 QNGLPQESIGLFH--LMMES----------GFQPDSATIVSLLSSCSQLGALDFGCWLHD 250
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ GFD V +G +LI+ Y R G+V +R+VFD M E++ VTW ++I+ Y +G +
Sbjct: 251 YADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQ 310
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSI 331
A+++F +M ++ + N +T AVL A AH G++ G+ + + + L V +
Sbjct: 311 AMELFTEM-RAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCM 369
Query: 332 IDMYCKCGQVDLARKAFNQM--KEKNVRSWTAMIAGYGMH 369
+DM+ + G ++ A + + KE WT+M+ MH
Sbjct: 370 VDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMH 409
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/583 (38%), Positives = 341/583 (58%), Gaps = 33/583 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++ C+ L GK H A FG D + LI++Y+KCG+ AR++FD + +R
Sbjct: 63 LQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMS--VR 120
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+I+SW +M+ GY N EAL LF E ++ + ++S L AC+
Sbjct: 121 SIISWNTMIAGYTHNREDVEALKLFSRMHREGTQ------------MTEFTLSSTLCACA 168
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ H IK DS VG +D YA+ + + VF+ M EK +VTW+S
Sbjct: 169 AKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSS 228
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+ A + QNGL E L +F Q + ++ T+S++L A L ++ G +H ++K
Sbjct: 229 LFAGFVQNGLHEEVLCLF-QSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKH 287
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
++ V TS++D+Y KCGQ++ + + F M+EKNV W AMIA + H + EA+ LF
Sbjct: 288 GFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILF 347
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
KM + G+ PN +T++S+LSACSH GLV+EG H+ N + + EP V HY CMVD+LGR
Sbjct: 348 EKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGR 407
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
+GK EA+ L++ M + +WGSLLG+ RIHKN+ L IAA++LF LEP N G HVLL
Sbjct: 408 SGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLL 467
Query: 500 SNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYL 559
SN+YA +G WE+V R +++ K G S +E +GK+H F+ G++EHP +Y L
Sbjct: 468 SNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKL 527
Query: 560 EELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NL 601
EE+ +++++ + + +HDV ++KE L+ HSEKLA NL
Sbjct: 528 EEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNL 587
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
R+CGDCH+ ++++S + +R+++VRD RFH+FKDG CSCGD+W
Sbjct: 588 RICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 178/343 (51%), Gaps = 21/343 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SWN++IA + VEAL+ FS M + T T + +C+A + + KQ H
Sbjct: 121 SIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLH 180
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A FV +A +D+Y+KC + DA +F+ +P++ V+W+S+ G+VQN
Sbjct: 181 TIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTS--VTWSSLFAGFVQNGL 238
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFV 214
E L LF+ S + + + ++S+LS C+ + + + EG H +
Sbjct: 239 HEEVLCLFQ------------STQREGMQLTEFTVSSILSTCASLAL--IIEGTQVHAVI 284
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+K GF + V +L+D YA+ G ++ S +VF M EK+ V WN++IA ++++ + EA+
Sbjct: 285 VKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAM 344
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIID 333
+F++M + + N VT ++L A +H G++ G+ + ++ E +V+ + ++D
Sbjct: 345 ILFEKM-QQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVD 403
Query: 334 MYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREA 375
+ + G+ D A K ++M E W +++ +H R A
Sbjct: 404 VLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLA 446
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 156/322 (48%), Gaps = 13/322 (4%)
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
+D + +L C++ V + HG I G ++ N LI+ Y + G D +R+
Sbjct: 53 LIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARR 112
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VFD M + ++WN++IA Y N EAL +F +M + + TLS+ L A A
Sbjct: 113 VFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHRE-GTQMTEFTLSSTLCACAAKY 171
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
+ K +H IK+ L+ S VGT+ +D+Y KC + A F M EK +W+++ A
Sbjct: 172 AIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFA 231
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
G+ + E L LF + G++ T S+LS C+ L+ EG T H ++
Sbjct: 232 GFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEG-----TQVHAVIVK 286
Query: 425 PGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
G +VD+ + G+++++Y++ M+ K + V+W +++ + H + I
Sbjct: 287 HGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEK-NVVLWNAMIASFSRHAHSWEAMI 345
Query: 481 AAKKLFE--LEPNNCGYHVLLS 500
+K+ + + PN Y +LS
Sbjct: 346 LFEKMQQVGIFPNEVTYLSILS 367
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 6/159 (3%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+++ NV WN++IA +R S EA+ F M+++ + P T+ + +CS + G
Sbjct: 319 MEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEG 378
Query: 93 KQAHQQAFIFG---FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
+ H + +V S ++D+ + G+ +A KL D++P W S+L
Sbjct: 379 R--HYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFE-PTASMWGSLLG 435
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
+ N R A + ++ E E GG NV+ S
Sbjct: 436 SSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAAS 474
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/671 (34%), Positives = 378/671 (56%), Gaps = 63/671 (9%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL--SLTPTRSTFPCAI 80
+++ LF + + ++ S+N+VIA + GG +A+R + ++ + S+ P+R T +
Sbjct: 89 SDMEALFAS-MTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMV 147
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI------ 134
+ SAL D GKQ H Q GF + FV S L+DMY+K + DA++ FDE+
Sbjct: 148 MAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVV 207
Query: 135 -----------------PQRI------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
+R+ R+ ++WT+M+TG+ QN EAL +F+ +
Sbjct: 208 MYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQ- 266
Query: 172 SECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLID 231
+ +D S+L+AC ++ + H ++I+ +D V VG+ L+D
Sbjct: 267 -----------GIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVD 315
Query: 232 AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
Y++ + ++ VF M K+ ++W ++I Y QNG + EA+ VF +M + + +
Sbjct: 316 MYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRD-GIDPDDY 374
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
TL +V+ + A+L L G H + L + V +++ +Y KCG ++ A + F++M
Sbjct: 375 TLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM 434
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
+ SWTA+++GY RA+E +DLF KM+ GV+P+ +TF+ VLSACS AG V++G
Sbjct: 435 SFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGR 494
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
+ ++M + I P +HY CM+DL R+GKLKEA + I+ M + D + WG+LL ACR+
Sbjct: 495 SYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRL 554
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFS 531
++++G+ AA+ L E++P N +VLL +++A G+W +V + R M++R++ K PG S
Sbjct: 555 RGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCS 614
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTL 591
++ + KVH F D+ HP + IYE LE LN K+ E GY D++SV+HDV +K +
Sbjct: 615 WIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMV 674
Query: 592 RIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF 633
HSEKLA NLRVC DCH + ISK+ R+I+VRD+ RFH F
Sbjct: 675 SHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKF 734
Query: 634 KDGLCSCGDYW 644
DG+CSCGD+W
Sbjct: 735 SDGVCSCGDFW 745
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 208/434 (47%), Gaps = 85/434 (19%)
Query: 114 LIDMYSKCGELSDARKLFDEIPQ----------------RI-------------RNIVSW 144
L+ Y K G + AR++FD +P R+ R+IVS+
Sbjct: 47 LLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSY 106
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
+++ G+ + +A+ ++ L +S +V + +++++ A S +
Sbjct: 107 NAVIAGFSGGGSHAQAVRVYLALLQADS----------SVRPSRITMSTMVMAASALGDR 156
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYA------------------------------ 234
+ + H +++ GF + VG+ L+D YA
Sbjct: 157 ALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGL 216
Query: 235 -RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
R V+ +R++F+ M ++D++TW +++ + QNGL +EAL++F +M + + + T
Sbjct: 217 LRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRM-RFQGIAIDQYTF 275
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
++L A L L GK IH +I+ +++V VG++++DMY KC + LA F +M
Sbjct: 276 GSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTC 335
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
KN+ SWTA+I GYG + + EA+ +F +M + G+ P+ T SV+S+C++ ++EG +
Sbjct: 336 KNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQF 395
Query: 414 LNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
H + G+ HY +V L G+ G +++A+ L + M D V W +L+
Sbjct: 396 -----HCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVSGY 449
Query: 470 ----RIHKNVDLGE 479
R + +DL E
Sbjct: 450 AQFGRAKETIDLFE 463
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 250/716 (34%), Positives = 373/716 (52%), Gaps = 94/716 (13%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S++S K + +F + +++ V SW ++ L R G +A++ F M L
Sbjct: 101 NSLLSMYAKSGRLADARVVFAQMPERDAV-SWTVMVVGLNRAGRFWDAVKTFLDMVGEGL 159
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P++ + SC+A G++ H G V V+++++ MY KCG+ AR
Sbjct: 160 APSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARA 219
Query: 130 LFDEIPQRI-----------------------------RNIVSWTSMLTGYVQNDNAREA 160
+F+ + R R+IVSW +++ GY QN A
Sbjct: 220 VFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMA 279
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
L F L + ++ D + SVLSAC+ + + + + H ++++ G
Sbjct: 280 LKFFSRML-----------TASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMP 328
Query: 221 SEVGVGNTLIDAYARGGHVDVSRK---------------------------------VFD 247
+ N LI YA+ G V+ +R+ VFD
Sbjct: 329 YSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFD 388
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
M +D + W ++I Y QNG EA+++F M++S + N+ TL+AVL A A L L
Sbjct: 389 VMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGP-EPNSHTLAAVLSACASLAYLG 447
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM-KEKNVRSWTAMIAGY 366
GK IH + I+ E+SV V +II +Y + G V LAR+ F+Q+ K +WT+MI
Sbjct: 448 YGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVAL 507
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
H +A+ LF +M++ GV+P+ +T++ V SAC+HAG + +G + M +E I P
Sbjct: 508 AQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPE 567
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
+ HY CMVDLL RAG L EA++ I+ M V D VVWGSLL ACR+ KN DL E+AA+KL
Sbjct: 568 MSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLL 627
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
++P+N G + L+N+Y+ GRW D R L K++ + K GFS ++ KVH F D
Sbjct: 628 SIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADD 687
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
HPQ + I + E+ ++++ G+V D+ SV+HDVD E KE L HSEKLA
Sbjct: 688 VLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLIS 747
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT I+ ISKVVDREI+VRD+ RFH+F+DG CSC DYW
Sbjct: 748 TPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 206/446 (46%), Gaps = 83/446 (18%)
Query: 106 RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
R+ F ++L+ MY+K G L+DAR +F ++P+R + VSWT M+ G + +A+ F
Sbjct: 95 RNAFTWNSLLSMYAKSGRLADARVVFAQMPER--DAVSWTVMVVGLNRAGRFWDAVKTFL 152
Query: 166 EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGV 225
+ + E + + +VLS+C+ G+ H FVIK G S V V
Sbjct: 153 DMVGE------------GLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPV 200
Query: 226 GNTLIDAYARGGHVDVSRKVFD-------------------------------GMIEKDA 254
N+++ Y + G + +R VF+ M E+
Sbjct: 201 ANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSI 260
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
V+WN+IIA Y QNGL AL F +M+ ++ ++ + T+++VL A A+L +L++GK +H
Sbjct: 261 VSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHS 320
Query: 315 QVIKMDLEES---------------------------------VIVGTSIIDMYCKCGQV 341
+++ + S VI T++++ Y K G
Sbjct: 321 YILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDT 380
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
AR+ F+ M ++V +WTAMI GY + + EA++LF MI++G PN T +VLSAC
Sbjct: 381 KQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSAC 440
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+ + G ++ E V ++ + R+G + A + + + + + V
Sbjct: 441 ASLAYLGYGKQ-IHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVT 499
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFE 487
W S++ A H LGE A LFE
Sbjct: 500 WTSMIVALAQH---GLGE-QAIVLFE 521
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 198/404 (49%), Gaps = 35/404 (8%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
MK+ SS +++VS + H +L + +++ ++ SWN++IA + G AL+
Sbjct: 224 MKVRSESSWNAMVS-LYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKF 282
Query: 61 FSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
FS M S + P T + +C+ L L GKQ H G + +ALI Y+
Sbjct: 283 FSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYA 342
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF-----KEFLLEESEC 174
K G + AR++ D+ N++S+T++L GYV+ + ++A +F ++ + +
Sbjct: 343 KSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMI 402
Query: 175 GGASENSDN-----VF---------VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
G +N N +F +S +A+VLSAC+ + G + H I+ +
Sbjct: 403 VGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQE 462
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
V V N +I YAR G V ++R+VFD + K+ VTW S+I AQ+GL +A+ +F++
Sbjct: 463 QSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEE 522
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS----IIDMY 335
M++ VK + VT V A H G + GK ++Q++ E ++ S ++D+
Sbjct: 523 MLR-VGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLN---EHGIVPEMSHYACMVDLL 578
Query: 336 CKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
+ G + A + +M + W +++A CR R+ DL
Sbjct: 579 ARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA----CRVRKNADL 618
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/626 (38%), Positives = 379/626 (60%), Gaps = 41/626 (6%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N +I L + G+ +AL S L P + T+ I SC+ + L ++ H+
Sbjct: 43 NKLIQSLCKQGNLTQALELLS----LEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLE 98
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
GF +D F+++ LI+MYS + +ARK+FD+ R R I + ++ + E L
Sbjct: 99 NGFDQDPFLATKLINMYSFFDSIDNARKVFDK--TRNRTIYVYNALFRALSLAGHGEEVL 156
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC--SRVTVNGVTEG--AHGFVIKR 217
+++ NS + D VL AC S V+ + +G H +++
Sbjct: 157 NMYRRM------------NSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRH 204
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
G+D V + TL+D YA+ G V + VF+ M K+ V+W+++IA YA+NG A EAL++F
Sbjct: 205 GYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELF 264
Query: 278 DQ-MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
+ M+++ D+ N+VT+ +VL A A L L G+ IH +++ L+ + V ++++ MY
Sbjct: 265 RELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYA 324
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
+CG+++L ++ F+QM +++V SW ++I+ YG+H ++A+ +F +M GV P+ I+FVS
Sbjct: 325 RCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVS 384
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VL ACSHAGLV EG N+M I P VEHY CMVDLLGRA +L+EA +IE M+++
Sbjct: 385 VLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIE 444
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
VWGSLLG+CRIH NV+L E A+ +LF+LEP N G +VLL++IYA AG W+ V+R +
Sbjct: 445 PGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVK 504
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
L++ R L K PG S +E++ K+++F+ D+ +P+ E+++ L +L+++L+E GYV
Sbjct: 505 KLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTK 564
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V++D+ EKE + HSEKLA +LR+C DCH+ + ISK
Sbjct: 565 VVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFA 624
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
++EI+VRD RFH+F+DG+CSCGDYW
Sbjct: 625 NKEILVRDVNRFHHFRDGVCSCGDYW 650
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 23/260 (8%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS--MRK 66
++++V K +N + +FN+ KN V SW+++IA A+ G + EAL F +
Sbjct: 213 MTTLVDMYAKFGCVSNASCVFNQMPVKN-VVSWSAMIACYAKNGKAFEALELFRELMLET 271
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
L P T +++C+AL L G+ H G + V SAL+ MY++CG+L
Sbjct: 272 QDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLEL 331
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
+++FD++ + R++VSW S+++ Y + ++A+ +F+E + V
Sbjct: 332 GQRVFDQMDK--RDVVSWNSLISSYGVHGFGKKAIGIFEEM------------TYNGVEP 377
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFV---IKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
++ SVL ACS + V EG F + G V ++D R ++ +
Sbjct: 378 SPISFVSVLGACSHAGL--VDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAA 435
Query: 244 KVFDGM-IEKDAVTWNSIIA 262
K+ + M IE W S++
Sbjct: 436 KIIENMRIEPGPKVWGSLLG 455
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/641 (38%), Positives = 377/641 (58%), Gaps = 40/641 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F DK++V SWNS+I L + G +EA+ + SMR+ + P T ++ SC++L
Sbjct: 371 VFYFMTDKDSV-SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLK 429
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+Q H ++ G +V VS+AL+ +Y++ G L++ RK+F +P+ + VSW S+
Sbjct: 430 WAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH--DQVSWNSI 487
Query: 148 LTGYVQNDNA-REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+ +++ + EA++ F L G ++ + +SVLSA S ++ +
Sbjct: 488 IGALARSERSLPEAVVCF----LNAQRAGQK--------LNRITFSSVLSAVSSLSFGEL 535
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK-DAVTWNSIIAIYA 265
+ HG +K E N LI Y + G +D K+F M E+ D VTWNS+I+ Y
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
N L A+ALD+ M++ T + ++ + VL A A + L G +H ++ LE V
Sbjct: 596 HNELLAKALDLVWFMLQ-TGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM-IK 384
+VG++++DMY KCG++D A + FN M +N SW +MI+GY H + EAL LF M +
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLD 714
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
P+++TFV VLSACSHAGL++EG+ +M + + P +EH+ CM D+LGRAG+L
Sbjct: 715 GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELD 774
Query: 445 EAYDLIEGMKVKADFVVWGSLLGAC-RIH-KNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
+ D IE M +K + ++W ++LGAC R + + +LG+ AA+ LF+LEP N +VLL N+
Sbjct: 775 KLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNM 834
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
YA GRWED+ + R MK+ + K G+S V ++ VH F+ GDK HP + IY+ L+EL
Sbjct: 835 YAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKEL 894
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------------NLRV 603
N K+++ GYV ++D++QE KE L HSEKLA NLRV
Sbjct: 895 NRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRV 954
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CGDCH+ + ISK+ R+I++RDS RFH+F+DG CSC D+W
Sbjct: 955 CGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 216/445 (48%), Gaps = 30/445 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL--HDLH 90
++ N SWNS+I+ ++ GD A R FSSM+ PT TF + + +L D+
Sbjct: 166 IEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVR 225
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+Q G D+FV S L+ ++K G LS ARK+F+++ RN V+ ++ G
Sbjct: 226 LLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM--ETRNAVTLNGLMVG 283
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD-----SVAIASVLSACSRVTVNG 205
V+ EA LF + N +D V + S S G
Sbjct: 284 LVRQKWGEEATKLFMDM---------------NSMIDVSPESYVILLSSFPEYSLAEEVG 328
Query: 206 VTEG--AHGFVIKRGF-DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ +G HG VI G D VG+GN L++ YA+ G + +R+VF M +KD+V+WNS+I
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
QNG EA++ + M + D+ + TL + L + A L +LG+ IH + +K+ ++
Sbjct: 389 GLDQNGCFIEAVERYKSM-RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 447
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA-REALDLFYK 381
+V V +++ +Y + G ++ RK F+ M E + SW ++I R+ EA+ F
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLN 507
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
+AG + N ITF SVLSA S + G ++ + + NI ++ G+ G
Sbjct: 508 AQRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IHGLALKNNIADEATTENALIACYGKCG 566
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLL 466
++ + M + D V W S++
Sbjct: 567 EMDGCEKIFSRMAERRDNVTWNSMI 591
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 203/440 (46%), Gaps = 23/440 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD--LHSGKQ 94
N SW +++ +R G+ EAL M K + + F +++C + + G+Q
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKC-GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H F + D VS+ LI MY KC G + A F +I ++N VSW S+++ Y Q
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDI--EVKNSVSWNSIISVYSQ 183
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN-GVTEGAHG 212
+ R A +F + S ++ F + V +ACS + + E
Sbjct: 184 AGDQRSAFRIFSSMQYD------GSRPTEYTFG-----SLVTTACSLTEPDVRLLEQIMC 232
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ K G +++ VG+ L+ A+A+ G + +RKVF+ M ++AVT N ++ + E
Sbjct: 233 TIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEE 292
Query: 273 ALDVFDQMVKSTDVKCNAVTL---SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI-VG 328
A +F M DV + + S ++A L+ G+ +H VI L + ++ +G
Sbjct: 293 ATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIG 352
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
+++MY KCG + AR+ F M +K+ SW +MI G + EA++ + M + +
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P T +S LS+C+ + G ++ + I+ V ++ L G L E
Sbjct: 413 PGSFTLISSLSSCASLKWAKLG-QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 449 LIEGMKVKADFVVWGSLLGA 468
+ M + D V W S++GA
Sbjct: 472 IFSSMP-EHDQVSWNSIIGA 490
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 176/384 (45%), Gaps = 33/384 (8%)
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H + + +DV++ + LI+ Y + G+ ARK+FDE+P +RN VSW +++GY +N
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP--LRNCVSWACIVSGYSRNG 81
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGF 213
+EAL+ ++ + E +F + A SVL AC + G+ G HG
Sbjct: 82 EHKEALVFLRDMVKE------------GIFSNQYAFVSVLRACQEIGSVGILFGRQIHGL 129
Query: 214 VIKRGFDSEVGVGNTLIDAYARG-GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ K + + V N LI Y + G V + F + K++V+WNSII++Y+Q G
Sbjct: 130 MFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRS 189
Query: 273 ALDVFDQM----VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
A +F M + T+ ++ +A L + +L C + K L + VG
Sbjct: 190 AFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCT---IQKSGLLTDLFVG 246
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA-GV 387
+ ++ + K G + ARK FNQM+ +N + ++ G EA LF M V
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV 306
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY-----GCMVDLLGRAGK 442
P ++V +LS+ L +E H I G+ + +V++ + G
Sbjct: 307 SPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 443 LKEAYDLIEGMKVKADFVVWGSLL 466
+ +A + M K D V W S++
Sbjct: 365 IADARRVFYFMTDK-DSVSWNSMI 387
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
G H + K D +V + N LI+AY G +RKVFD M ++ V+W I++ Y
Sbjct: 18 GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGY 77
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA---IAHLGVLRLGKCIHDQVIKMDL 321
++NG EAL MVK + N +VL A I +G+L G+ IH + K+
Sbjct: 78 SRNGEHKEALVFLRDMVKE-GIFSNQYAFVSVLRACQEIGSVGIL-FGRQIHGLMFKLSY 135
Query: 322 EESVIVGTSIIDMYCKC-GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
+V +I MY KC G V A AF ++ KN SW ++I+ Y R A +F
Sbjct: 136 AVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFS 195
Query: 381 KMIKAGVRPNYITFVS-VLSACS 402
M G RP TF S V +ACS
Sbjct: 196 SMQYDGSRPTEYTFGSLVTTACS 218
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
N V LS V + H G R H ++ K L++ V + ++I+ Y + G ARK F
Sbjct: 3 NCVPLSFVQSCVGHRGAARF---FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVF 59
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
++M +N SW +++GY + +EAL M+K G+ N FVSVL AC G V
Sbjct: 60 DEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 253/667 (37%), Positives = 377/667 (56%), Gaps = 41/667 (6%)
Query: 3 LSKSSSVSSVVSN----VDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEAL 58
LS +++ S+ ++N + H + + + N+ SW ++++ L + +AL
Sbjct: 45 LSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDAL 104
Query: 59 RAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMY 118
AFSSM + L PT+ A ++ +AL H+G Q H GF ++FV+S L DMY
Sbjct: 105 AAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMY 164
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
SK G L +A ++FD++PQ+ + V+WT+M+ GY +N N A++ F++ E
Sbjct: 165 SKSGLLVEACRVFDQMPQK--DAVAWTAMIDGYAKNGNLEAAVIAFRDMRRE-------- 214
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
V D + SVLSA + + H V+K GF+ EV V N L D YA+
Sbjct: 215 ---GLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAAD 271
Query: 239 VDVSRKVFDGMIEK---DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
+D + +V I++ + V+ S+I Y + +AL +F ++ + V+ N T S+
Sbjct: 272 MDNAARVVK--IDQGSLNVVSATSLIDGYIETDCIEKALLMFIEL-RRQGVEPNEFTFSS 328
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
++ A +L G +H +VIK L V ++++DMY KCG + L+ + F +++
Sbjct: 329 MIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHT 388
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
+W A I H REA+ F +M +G+RPN+ITFVS+L+ACSHAGLV EG +
Sbjct: 389 DIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFY 448
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
+M IEP EHY C++D+ GRAG+L EA I M VK + W SLLGACR+ N
Sbjct: 449 SMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNK 508
Query: 476 DLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVEL 535
+LGEIAA + +LEP+N G HV LS IYA+ G+WEDV+ R LM++ R+ K PGFS V+
Sbjct: 509 ELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDS 568
Query: 536 RGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHS 595
K H F D HPQ EKIYE LEEL +++E GYV D + +++ K+ LR HS
Sbjct: 569 NKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHS 628
Query: 596 EKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGL 637
E++A NLR+C DCH+ ++ ISKV +R+I+VRD+ RFH+F G
Sbjct: 629 ERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDNSRFHHFVKGG 688
Query: 638 CSCGDYW 644
CSCGDYW
Sbjct: 689 CSCGDYW 695
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 217/483 (44%), Gaps = 53/483 (10%)
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHR-DVFVSSALIDMYSKCGELSDAR 128
T T ++SC DL G+ H + + G F+++ LI MYS C ++ A
Sbjct: 14 TATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAV 73
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
+LFD +P+ N+VSWT++++G QN R+AL F S C +
Sbjct: 74 RLFDAMPR--PNLVSWTTLVSGLTQNSMHRDALAAF------SSMCRAG------LVPTQ 119
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
A++S A + + H ++ GFD+E+ V + L D Y++ G + + +VFD
Sbjct: 120 FALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQ 179
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M +KDAV W ++I YA+NG A+ F M + V + L +VL A L L
Sbjct: 180 MPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWL 239
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN-QMKEKNVRSWTAMIAGYG 367
+ IH V+K E+ V V ++ DMY K +D A + NV S T++I GY
Sbjct: 240 ARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYI 299
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW------LNTMGHEF 421
+AL +F ++ + GV PN TF S++ C+ L+++G + + F
Sbjct: 300 ETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSF 359
Query: 422 NIEPGVEHYG------------------------CMVDLLGRAGKLKE---AYDLIEGMK 454
++ YG +++L + G +E A+D +
Sbjct: 360 VSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSG 419
Query: 455 VKADFVVWGSLLGACRIHKNVDLGE---IAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
++ + + + SLL AC VD G + K +EP Y ++ ++Y AGR ++
Sbjct: 420 IRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCII-DMYGRAGRLDE 478
Query: 512 VER 514
E+
Sbjct: 479 AEK 481
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/681 (35%), Positives = 378/681 (55%), Gaps = 81/681 (11%)
Query: 42 NSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSALHDLHSG--KQAHQQ 98
N++++ AR + A+ F ++ SL P +F I + +H+L + Q H
Sbjct: 131 NAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCS 190
Query: 99 AFIFGFHRDVFVSSALIDMYSKC--GELS-DARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
G + VS+ALI +Y KC E S DARK+ DE+P + + ++WT+M+ GYV+
Sbjct: 191 VLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDK--DDLTWTTMVVGYVRRG 248
Query: 156 NAREALLLFKEF--------------LLEESECGGASE-----NSDNVFVDSVAIASVLS 196
+ A +F+E ++ C A E S+ V +D SVLS
Sbjct: 249 DVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLS 308
Query: 197 ACSRVTVNGVTEGAHGFVIK--RGFDSE--VGVGNTLIDAYARGGHVDVSRKVFDGMIEK 252
AC+ + HG +I+ F E + V N L+ Y++GG + +++++FD M K
Sbjct: 309 ACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK 368
Query: 253 DAVTWNSI-------------------------------IAIYAQNGLAAEALDVFDQMV 281
D V+WN+I ++ Y GL+ +AL +F+QM
Sbjct: 369 DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQM- 427
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
++ DVK T + + A LG L+ G+ +H +++ E S G +++ MY KCG V
Sbjct: 428 RAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAV 487
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ AR F M + SW AMI+ G H REAL+LF +M+ G+ P+ I+F+++L+AC
Sbjct: 488 NDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTAC 547
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+HAGLV EG+H+ +M +F I PG +HY ++DLLGR+G++ EA DLI+ M + +
Sbjct: 548 NHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSI 607
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKN 521
W ++L CR + +++ G AA +LF + P + G ++LLSN Y+ AGRW D R R LM++
Sbjct: 608 WEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRD 667
Query: 522 RRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHD 581
R + K PG S +E+ K+H FLVGD +HP+ +++Y++LE + +++++GYV D V+HD
Sbjct: 668 RGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHD 727
Query: 582 VDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIV 623
++ EKE L HSEKLA NLR+CGDCHT + +SK V REIV
Sbjct: 728 MEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIV 787
Query: 624 VRDSKRFHYFKDGLCSCGDYW 644
VRD +RFH+FKDG CSCG+YW
Sbjct: 788 VRDVRRFHHFKDGECSCGNYW 808
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 125/523 (23%), Positives = 217/523 (41%), Gaps = 119/523 (22%)
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+++L+ ++ G L DA FD +P R+ V +M++ + + A A+ +F L
Sbjct: 97 ATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALL-- 154
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI 230
G S D+ A+ S + + T+ H V+K G + + V N LI
Sbjct: 155 ----GSGSLRPDDY--SFTALISAVGQMHNLAAPHCTQ-LHCSVLKSGAAAVLSVSNALI 207
Query: 231 DAYARGGHVDVS---RKVFDGMIEKDAVT------------------------------- 256
Y + + S RKV D M +KD +T
Sbjct: 208 ALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVV 267
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
WN++I+ Y Q+G+ A+A ++F +MV S V + T ++VL A A+ G GK +H Q+
Sbjct: 268 WNAMISGYVQSGMCADAFELFRRMV-SEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQI 326
Query: 317 IKMD----LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA----------- 361
I++ E ++ V +++ +Y K G++ +A++ F+ M K+V SW
Sbjct: 327 IRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCL 386
Query: 362 --------------------MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
M++GY + +AL LF +M V+P T+ ++AC
Sbjct: 387 DKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAAC 446
Query: 402 S-----------HAGLVQEGWHWLNTMGHE-----------------FNIEPGVE--HYG 431
HA LVQ G+ N+ G+ F + P ++ +
Sbjct: 447 GELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWN 506
Query: 432 CMVDLLGRAGKLKEAYDLIEGM---KVKADFVVWGSLLGACRIHKNVDLG---EIAAKKL 485
M+ LG+ G +EA +L + M + D + + ++L AC VD G + K+
Sbjct: 507 AMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRD 566
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
F + P Y L+ ++ +GR + R L+K TP
Sbjct: 567 FGISPGEDHYARLI-DLLGRSGR---IGEARDLIKTMPFEPTP 605
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 172/379 (45%), Gaps = 45/379 (11%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN++I+ + G +A F M + TF + +C+ GK H Q
Sbjct: 268 WNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQII 327
Query: 101 I----FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
F + V++AL+ +YSK G++ A+++FD + ++++VSW ++L+GY+ +
Sbjct: 328 RLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM--NLKDVVSWNTILSGYIDSGC 385
Query: 157 AREALLLFKEFLLEESEC----------GGASENSDNVFVDSVA---------IASVLSA 197
+A+ +FK + GG SE++ +F A A ++A
Sbjct: 386 LDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAA 445
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C + H +++ GF++ GN L+ YA+ G V+ +R VF M D+V+W
Sbjct: 446 CGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSW 505
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N++I+ Q+G EAL++FDQMV + + + ++ +L A H G++ G +
Sbjct: 506 NAMISALGQHGHGREALELFDQMV-AEGIDPDRISFLTILTACNHAGLVDEGFHYFES-- 562
Query: 318 KMDLEESVIVG----TSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRA 372
M + + G +ID+ + G++ AR M E W A+++G CR
Sbjct: 563 -MKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSG----CRT 617
Query: 373 R-------EALDLFYKMIK 384
A D ++MI
Sbjct: 618 NGDMEFGAYAADQLFRMIP 636
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 23/262 (8%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + N SW +++ GG S +AL+ F+ MR + P T+ AI +C L L
Sbjct: 394 KVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALK 453
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G+Q H GF +AL+ MY+KCG ++DAR +F +P + VSW +M++
Sbjct: 454 HGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPN--LDSVSWNAMISA 511
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Q+ + REAL LF + + E + D ++ ++L+AC+ + V EG
Sbjct: 512 LGQHGHGREALELFDQMVAE------------GIDPDRISFLTILTACNHAGL--VDEGF 557
Query: 211 HGF-VIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQ 266
H F +KR F G + LID R G + +R + M E W +I++
Sbjct: 558 HYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRT 617
Query: 267 NG---LAAEALDVFDQMVKSTD 285
NG A A D +M+ D
Sbjct: 618 NGDMEFGAYAADQLFRMIPQHD 639
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/641 (38%), Positives = 357/641 (55%), Gaps = 33/641 (5%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
T + L + N+F +NS+I E L F S+RK L TFP +K
Sbjct: 60 QTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLK 119
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI 141
+C+ G H GF+ DV ++L+ +YS G L+DA KLFDEIP R ++
Sbjct: 120 ACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR--SV 177
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
V+WT++ +GY + REA+ LFK+ + E G V DS I VLSAC V
Sbjct: 178 VTWTALFSGYTTSGRHREAIDLFKKMV----EMG--------VKPDSYFIVQVLSACVHV 225
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSII 261
E ++ + V TL++ YA+ G ++ +R VFD M+EKD VTW+++I
Sbjct: 226 GDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMI 285
Query: 262 AIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL 321
YA N E +++F QM++ ++K + ++ L + A LG L LG+ + + +
Sbjct: 286 QGYASNSFPKEGIELFLQMLQE-NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEF 344
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK 381
++ + ++IDMY KCG + + F +MKEK++ A I+G + + + +F +
Sbjct: 345 LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ 404
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
K G+ P+ TF+ +L C HAGL+Q+G + N + + ++ VEHYGCMVDL GRAG
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSN 501
L +AY LI M ++ + +VWG+LL CR+ K+ L E K+L LEP N G +V LSN
Sbjct: 465 MLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSN 524
Query: 502 IYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEE 561
IY+ GRW++ R +M + + K PG+S +EL GKVH FL DK HP +KIY LE+
Sbjct: 525 IYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLED 584
Query: 562 LNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRV 603
L +++ +G+V V DV++EEKE L HSEKLA NLRV
Sbjct: 585 LGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRV 644
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CGDCH V++LISK+ REIVVRD+ RFH F +G CSC DYW
Sbjct: 645 CGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 104/262 (39%), Gaps = 43/262 (16%)
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
TL +V + HL K IH +I L + ++ Q + F+
Sbjct: 18 TLISVACTVNHL------KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHT 71
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS--------- 402
+ N+ + ++I G+ + E LDLF + K G+ + TF VL AC+
Sbjct: 72 QFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI 131
Query: 403 --HAGLVQEGW-HWLNTMGHEFNIEPG------------------VEHYGCMVDLLGRAG 441
H+ +V+ G+ H + M +I G V + + +G
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG 191
Query: 442 KLKEAYDLIEG---MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE-PNNCGYHV 497
+ +EA DL + M VK D +L AC ++D GE K + E+E N
Sbjct: 192 RHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRT 251
Query: 498 LLSNIYANAGRWEDVERTRSLM 519
L N+YA G+ +E+ RS+
Sbjct: 252 TLVNLYAKCGK---MEKARSVF 270
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/626 (36%), Positives = 348/626 (55%), Gaps = 33/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
NV WN ++ D + R F M+ + P + T+P +K+C L DL G+Q H
Sbjct: 414 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 473
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Q F + +V S LIDMY+K G+L A + + ++VSWT+M+ GY Q +
Sbjct: 474 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK--DVVSWTTMIAGYTQYNF 531
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+AL F++ L + D V + + +SAC+ + + H
Sbjct: 532 DDKALTTFRQML------------DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 579
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
GF S++ N L+ Y+R G ++ S F+ D + WN++++ + Q+G EAL V
Sbjct: 580 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 639
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F +M + + N T + + A + ++ GK +H + K + V ++I MY
Sbjct: 640 FVRMNRE-GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 698
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG + A K F ++ KN SW A+I Y H EALD F +MI + VRPN++T V
Sbjct: 699 KCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 758
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VLSACSH GLV +G + +M E+ + P EHY C+VD+L RAG L A + I+ M +K
Sbjct: 759 VLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIK 818
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
D +VW +LL AC +HKN+++GE AA L ELEP + +VLLSN+YA + +W+ + TR
Sbjct: 819 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTR 878
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
MK + + K PG S +E++ +H+F VGD+ HP ++I+EY ++L + E+GYV D
Sbjct: 879 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCF 938
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
S+++++ E+K+ + IHSEKLA NLRVC DCH I+ +SKV
Sbjct: 939 SLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVS 998
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
+REI+VRD+ RFH+F+ G CSC DYW
Sbjct: 999 NREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 219/439 (49%), Gaps = 22/439 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC---SALHDL 89
+ + +F+WN +I +LA E F M ++TP TF +++C S D+
Sbjct: 106 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 165
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
+Q H + G V + LID+YS+ G + AR++FD + R+++ SW +M++
Sbjct: 166 --VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL--RLKDHSSWVAMIS 221
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
G +N+ EA+ LF + + + A +SVLSAC ++ + E
Sbjct: 222 GLSKNECEAEAIRLFCDMYVL------------GIMPTPYAFSSVLSACKKIESLEIGEQ 269
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG V+K GF S+ V N L+ Y G++ + +F M ++DAVT+N++I +Q G
Sbjct: 270 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 329
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
+A+++F +M ++ ++ TL+++++A + G L G+ +H K+ + +
Sbjct: 330 GEKAMELFKRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 388
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+++++Y KC ++ A F + + +NV W M+ YG+ R + +F +M + P
Sbjct: 389 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 448
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
N T+ S+L C G ++ G +++ + N + ++D+ + GKL A+D+
Sbjct: 449 NQYTYPSILKTCIRLGDLELG-EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 507
Query: 450 IEGMKVKADFVVWGSLLGA 468
+ K D V W +++
Sbjct: 508 LIRFAGK-DVVSWTTMIAG 525
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 203/440 (46%), Gaps = 17/440 (3%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + ++N++I L++ G +A+ F M L P +T + +CSA L G
Sbjct: 309 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 368
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H GF + + AL+++Y+KC ++ A F E + N+V W ML Y
Sbjct: 369 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET--EVENVVLWNVMLVAYG 426
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
D+ R + +F++ +EE + + S+L C R+ + E H
Sbjct: 427 LLDDLRNSFRIFRQMQIEE------------IVPNQYTYPSILKTCIRLGDLELGEQIHS 474
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+IK F V + LID YA+ G +D + + KD V+W ++IA Y Q +
Sbjct: 475 QIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK 534
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL F QM+ ++ + V L+ + A A L L+ G+ IH Q + +++
Sbjct: 535 ALTTFRQML-DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 593
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+Y +CG+++ + AF Q + + +W A+++G+ EAL +F +M + G+ N
Sbjct: 594 TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 653
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF S + A S +++G ++ + + + E ++ + + G + +A
Sbjct: 654 TFGSAVKAASETANMKQGKQ-VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE 712
Query: 453 MKVKADFVVWGSLLGACRIH 472
+ K + V W +++ A H
Sbjct: 713 VSTKNE-VSWNAIINAYSKH 731
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 185/408 (45%), Gaps = 19/408 (4%)
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALH-DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
S+ + P T ++ C + L G++ H Q G + +S L D Y
Sbjct: 34 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 93
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G+L A K+FDE+P+ R I +W M+ + E LF + S
Sbjct: 94 GDLYGAFKVFDEMPE--RTIFTWNKMIKELASRNLIGEVFGLFVRMV------------S 139
Query: 182 DNVFVDSVAIASVLSACSRVTVN-GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+NV + + VL AC +V V E H ++ +G V N LID Y+R G VD
Sbjct: 140 ENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVD 199
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
++R+VFDG+ KD +W ++I+ ++N AEA+ +F M + S+VL A
Sbjct: 200 LARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY-VLGIMPTPYAFSSVLSAC 258
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
+ L +G+ +H V+K+ V +++ +Y G + A F+ M +++ ++
Sbjct: 259 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 318
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
+I G +A++LF +M G+ P+ T S++ ACS G + G L+ +
Sbjct: 319 TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG-QQLHAYTTK 377
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ G +++L + ++ A D +V+ + V+W +L A
Sbjct: 378 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVA 424
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 12/130 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V N SWN++I ++ G EAL +F M ++ P T + +CS H G
Sbjct: 713 VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS-----HIG 767
Query: 93 KQAHQQAFIFGFHRDVFVSS------ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
A+ + + +S ++DM ++ G LS A++ E+P + +V W +
Sbjct: 768 LVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALV-WRT 826
Query: 147 MLTGYVQNDN 156
+L+ V + N
Sbjct: 827 LLSACVVHKN 836
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/685 (35%), Positives = 375/685 (54%), Gaps = 62/685 (9%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RK 66
S ++++S+ K + + +F+ ++ V SWNS+I+ A G +++++A++ M
Sbjct: 77 SWNTLLSSYSKLACLPEMERVFHAMPTRDMV-SWNSLISAYAGRGFLLQSVKAYNLMLYN 135
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
R + S +H G Q H FGF VFV S L+DMYSK G +
Sbjct: 136 GPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFC 195
Query: 127 ARKLFDEIPQ-----------------RI------------RNIVSWTSMLTGYVQNDNA 157
AR+ FDE+P+ RI ++ +SWT+M+ G+ QN
Sbjct: 196 ARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLD 255
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
REA+ LF+E LE N+ +D SVL+AC V + H ++I+
Sbjct: 256 REAIDLFREMRLE------------NLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT 303
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
+ + VG+ L+D Y + + + VF M K+ V+W +++ Y QNG + EA+ +F
Sbjct: 304 DYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIF 363
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
M ++ ++ + TL +V+ + A+L L G H + + L + V +++ +Y K
Sbjct: 364 CDM-QNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGK 422
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
CG ++ + + F++M + SWTA+++GY +A E L LF M+ G +P+ +TF+ V
Sbjct: 423 CGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGV 482
Query: 398 LSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
LSACS AGLVQ+G +M E I P +HY CM+DL RAG+L+EA I M
Sbjct: 483 LSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSP 542
Query: 458 DFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRS 517
D + W SLL +CR H+N+++G+ AA+ L +LEP+N ++LLS+IYA G+WE+V R
Sbjct: 543 DAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRK 602
Query: 518 LMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTS 577
M+++ L K PG S ++ + +VH F D+ +P ++IY LE+LN K+ + GYV DM S
Sbjct: 603 GMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNS 662
Query: 578 VIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVD 619
V+HDVD EK L HSEKLA NLRVCGDCH + ISK+
Sbjct: 663 VLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQ 722
Query: 620 REIVVRDSKRFHYFKDGLCSCGDYW 644
REI+VRD+ RFH FKDG CSCGD+W
Sbjct: 723 REILVRDAARFHLFKDGRCSCGDFW 747
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 215/439 (48%), Gaps = 64/439 (14%)
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
C L K+ H + ++F+ + L+ Y+K ++ AR++FD++PQR N+
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQR--NLY 76
Query: 143 SWTSMLTGYVQNDNAREALLLF--------------------KEFLLEESECGGASENSD 182
SW ++L+ Y + E +F + FLL+ + +
Sbjct: 77 SWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNG 136
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
++ +A++++L S+ + HG V+K GF S V VG+ L+D Y++ G V +
Sbjct: 137 PFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCA 196
Query: 243 RKVFDGMI-------------------------------EKDAVTWNSIIAIYAQNGLAA 271
R+ FD M EKD+++W ++IA + QNGL
Sbjct: 197 RQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDR 256
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA+D+F +M + +++ + T +VL A + L+ GK +H +I+ D ++++ VG+++
Sbjct: 257 EAIDLFREM-RLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSAL 315
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+DMYCKC + A F +M KNV SWTAM+ GYG + + EA+ +F M G+ P+
Sbjct: 316 VDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDD 375
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAY 447
T SV+S+C++ ++EG + H + G+ + +V L G+ G +++++
Sbjct: 376 FTLGSVISSCANLASLEEGAQF-----HCRALVSGLISFITVSNALVTLYGKCGSIEDSH 430
Query: 448 DLIEGMKVKADFVVWGSLL 466
L M D V W +L+
Sbjct: 431 RLFSEMSY-VDEVSWTALV 448
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 255/620 (41%), Positives = 349/620 (56%), Gaps = 76/620 (12%)
Query: 86 LHDLHSGKQAHQ---QAFIFGFHRDVFVSSALIDMYSKCG--ELSDARKLFDEIPQRIRN 140
LH+ H+ KQ ++ Q + GF D F +S L+ + L + ++FD I N
Sbjct: 36 LHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENS--N 93
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
W +M+ Y+Q+++A +ALLL+K + +NV D+ V+ AC+
Sbjct: 94 GFMWNTMMRAYIQSNSAEKALLLYKLMV------------KNNVGPDNYTYPLVVQACAV 141
Query: 201 VTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG------------ 248
+ + H V+K GFDS+V V NTLI+ YA G++ +RK+FD
Sbjct: 142 RLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSI 201
Query: 249 ----------------------MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
M EKD V+W+++I+ Y QNG+ EAL +F +M + +
Sbjct: 202 LAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEM-NANGM 260
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII----DMYCKCGQVD 342
+ + V + +VL A AHL +++ GK IH VI+M +E V + ++I DMY KCG V+
Sbjct: 261 RLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVE 320
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
A + FN M+EK V SW A+I G ++ +LD+F +M GV PN ITF+ VL AC
Sbjct: 321 NALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACR 380
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW 462
H GLV EG +M + IEP V+HYGCMVDLLGRAG L EA LIE M + D W
Sbjct: 381 HMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATW 440
Query: 463 GSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNR 522
G+LLGAC+ H + ++GE +KL EL+P++ G+HVLLSNI+A+ G WEDV R +MK +
Sbjct: 441 GALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQ 500
Query: 523 RLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDV 582
+ KTPG SL+E G VH FL GDK HP K+ L E+ +L+ GY D V D+
Sbjct: 501 GVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDI 560
Query: 583 DQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVV 624
D+EEKE TL HSEKLA NLR+C DCHT +LISK REIVV
Sbjct: 561 DEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVV 620
Query: 625 RDSKRFHYFKDGLCSCGDYW 644
RD RFHYFK+G CSC DYW
Sbjct: 621 RDRHRFHYFKEGACSCMDYW 640
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 202/395 (51%), Gaps = 33/395 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++ +N F WN+++ + + +AL + M K ++ P T+P +++C+ G
Sbjct: 89 IENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGG 148
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H GF DV+V + LI+MY+ CG + DARKLFDE P + + VSW S+L GYV
Sbjct: 149 KEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESP--VLDSVSWNSILAGYV 206
Query: 153 QNDN---AREALLLFKEF----------LLEESECGGASE---------NSDNVFVDSVA 190
+ + EA LF E L+ E G E N++ + +D V
Sbjct: 207 KKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVV 266
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI----DAYARGGHVDVSRKVF 246
+ SVLSAC+ +++ + HG VI+ G +S V + N LI D Y + G V+ + +VF
Sbjct: 267 VVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVF 326
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+GM EK +WN++I A NGL +LD+F +M K+ V N +T VL A H+G++
Sbjct: 327 NGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEM-KNNGVIPNEITFMGVLGACRHMGLV 385
Query: 307 RLGKCIHDQVI-KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIA 364
G+C +I K +E +V ++D+ + G ++ A K M +V +W A++
Sbjct: 386 DEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLG 445
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
H + K+I+ ++P++ F +LS
Sbjct: 446 ACKKHGDTEMGERVGRKLIE--LQPDHDGFHVLLS 478
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/626 (36%), Positives = 348/626 (55%), Gaps = 33/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
NV WN ++ D + R F M+ + P + T+P +K+C L DL G+Q H
Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 513
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Q F + +V S LIDMY+K G+L A + + ++VSWT+M+ GY Q +
Sbjct: 514 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK--DVVSWTTMIAGYTQYNF 571
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+AL F++ L + D V + + +SAC+ + + H
Sbjct: 572 DDKALTTFRQML------------DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 619
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
GF S++ N L+ Y+R G ++ S F+ D + WN++++ + Q+G EAL V
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 679
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F +M + + N T + + A + ++ GK +H + K + V ++I MY
Sbjct: 680 FVRMNRE-GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 738
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG + A K F ++ KN SW A+I Y H EALD F +MI + VRPN++T V
Sbjct: 739 KCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 798
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VLSACSH GLV +G + +M E+ + P EHY C+VD+L RAG L A + I+ M +K
Sbjct: 799 VLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIK 858
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
D +VW +LL AC +HKN+++GE AA L ELEP + +VLLSN+YA + +W+ + TR
Sbjct: 859 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTR 918
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
MK + + K PG S +E++ +H+F VGD+ HP ++I+EY ++L + E+GYV D
Sbjct: 919 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCF 978
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
S+++++ E+K+ + IHSEKLA NLRVC DCH I+ +SKV
Sbjct: 979 SLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVS 1038
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
+REI+VRD+ RFH+F+ G CSC DYW
Sbjct: 1039 NREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 219/439 (49%), Gaps = 22/439 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC---SALHDL 89
+ + +F+WN +I +LA E F M ++TP TF +++C S D+
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 205
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
+Q H + G V + LID+YS+ G + AR++FD + R+++ SW +M++
Sbjct: 206 --VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL--RLKDHSSWVAMIS 261
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
G +N+ EA+ LF + + + A +SVLSAC ++ + E
Sbjct: 262 GLSKNECEAEAIRLFCDMYVL------------GIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG V+K GF S+ V N L+ Y G++ + +F M ++DAVT+N++I +Q G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
+A+++F +M ++ ++ TL+++++A + G L G+ +H K+ + +
Sbjct: 370 GEKAMELFKRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+++++Y KC ++ A F + + +NV W M+ YG+ R + +F +M + P
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
N T+ S+L C G ++ G +++ + N + ++D+ + GKL A+D+
Sbjct: 489 NQYTYPSILKTCIRLGDLELG-EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 450 IEGMKVKADFVVWGSLLGA 468
+ K D V W +++
Sbjct: 548 LIRFAGK-DVVSWTTMIAG 565
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 203/440 (46%), Gaps = 17/440 (3%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + ++N++I L++ G +A+ F M L P +T + +CSA L G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H GF + + AL+++Y+KC ++ A F E + N+V W ML Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET--EVENVVLWNVMLVAYG 466
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
D+ R + +F++ +EE + + S+L C R+ + E H
Sbjct: 467 LLDDLRNSFRIFRQMQIEE------------IVPNQYTYPSILKTCIRLGDLELGEQIHS 514
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+IK F V + LID YA+ G +D + + KD V+W ++IA Y Q +
Sbjct: 515 QIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK 574
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL F QM+ ++ + V L+ + A A L L+ G+ IH Q + +++
Sbjct: 575 ALTTFRQML-DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 633
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+Y +CG+++ + AF Q + + +W A+++G+ EAL +F +M + G+ N
Sbjct: 634 TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 693
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF S + A S +++G ++ + + + E ++ + + G + +A
Sbjct: 694 TFGSAVKAASETANMKQGKQ-VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE 752
Query: 453 MKVKADFVVWGSLLGACRIH 472
+ K + V W +++ A H
Sbjct: 753 VSTKNE-VSWNAIINAYSKH 771
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 197/449 (43%), Gaps = 37/449 (8%)
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALH-DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
S+ + P T ++ C + L G++ H Q G + +S L D Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G+L A K+FDE+P+ R I +W M+ + E LF + S
Sbjct: 134 GDLYGAFKVFDEMPE--RTIFTWNKMIKELASRNLIGEVFGLFVRMV------------S 179
Query: 182 DNVFVDSVAIASVLSACSRVTVN-GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+NV + + VL AC +V V E H ++ +G V N LID Y+R G VD
Sbjct: 180 ENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVD 239
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
++R+VFDG+ KD +W ++I+ ++N AEA+ +F M + S+VL A
Sbjct: 240 LARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY-VLGIMPTPYAFSSVLSAC 298
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
+ L +G+ +H V+K+ V +++ +Y G + A F+ M +++ ++
Sbjct: 299 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 358
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
+I G +A++LF +M G+ P+ T S++ ACS G + G L+ +
Sbjct: 359 TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG-QQLHAYTTK 417
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA----------CR 470
+ G +++L + ++ A D +V+ + V+W +L A R
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFR 476
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
I + + + EI PN Y +L
Sbjct: 477 IFRQMQIEEIV--------PNQYTYPSIL 497
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 12/130 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V N SWN++I ++ G EAL +F M ++ P T + +CS H G
Sbjct: 753 VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS-----HIG 807
Query: 93 KQAHQQAFIFGFHRDVFVSS------ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
A+ + + +S ++DM ++ G LS A++ E+P + +V W +
Sbjct: 808 LVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALV-WRT 866
Query: 147 MLTGYVQNDN 156
+L+ V + N
Sbjct: 867 LLSACVVHKN 876
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/696 (36%), Positives = 382/696 (54%), Gaps = 94/696 (13%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG-K 93
+++VF +N++I + D A+ F M++ + P TF + + + + + +
Sbjct: 110 RDSVF-YNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQ 168
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGE---------LSDARKLFDEIPQRIRNIVSW 144
Q H G V +ALI Y KC +++ARKLFDE+P R + +SW
Sbjct: 169 QLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNR--DELSW 226
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS----------------------- 181
T+++TGYV+N++ A KEFL S+ G + N+
Sbjct: 227 TTIITGYVKNNDLDAA----KEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIM 282
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK----RGFDSEVGVGNTLIDAYARGG 237
+ +D SV+S C+ + + H + +K D + V N LI Y + G
Sbjct: 283 SKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCG 342
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIY-------------------------------AQ 266
VD+++++F+ M E+D V+WN I++ Y AQ
Sbjct: 343 KVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQ 402
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
G A EAL F++M C+ + +++ + LG L+ G+ +H QV++ E S+
Sbjct: 403 IGFAEEALKFFNRMKLQGFEPCD-YAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLS 461
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
G ++I MY +CG VD A F M + SW AMIA G H + +A++LF +M+K G
Sbjct: 462 AGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEG 521
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+ P+ I+F++V+SACSHAGLV+EG + ++M + + + P EHY ++DLL RAGK EA
Sbjct: 522 ILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEA 581
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
+++E M + +W +LL CRIH N+DLG AA++LFEL+P + G +VLLSN+YA A
Sbjct: 582 KEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVA 641
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
G+W D+ + R LM++R + K PG S +E+ KVH+FLVGD HP+ +IY YLE+L +++
Sbjct: 642 GQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEM 701
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+++GYV D V+HDV+ + KE L HSEKLA NLR+CGDCH
Sbjct: 702 RKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCH 761
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +SKVV REIVVRD KRFH+F+DG CSCGDYW
Sbjct: 762 NAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 179/442 (40%), Gaps = 91/442 (20%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
D+ + LI YS G+L +RK+F + P +R+ V + +M+T Y N + A+ LF +
Sbjct: 78 DIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCD 137
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN---------GVTEGAHGFVI-- 215
DN D+ SVL A + V V + GFV
Sbjct: 138 M------------QRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSV 185
Query: 216 --------------------------KRGFDSEVGVG----NTLIDAYARGGHVDVSRKV 245
++ FD T+I Y + +D +++
Sbjct: 186 LNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEF 245
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
+G +K V WN++I+ YA GL EA ++F +M+ S ++ + T ++V+ A+ G
Sbjct: 246 LNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSK-IQLDEFTFTSVISVCANAGC 304
Query: 306 LRLGKCIHDQVIKM----DLEESVIVGTSIIDMYCKCGQVDLARKA-------------- 347
RLGK +H +K + ++ V ++I Y KCG+VD+A++
Sbjct: 305 FRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNI 364
Query: 348 -----------------FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
FN+M EKN+ SW MI+G A EAL F +M G P
Sbjct: 365 ILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPC 424
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
F + +CS G ++ G L+ + E + ++ + R G + A+ L
Sbjct: 425 DYAFAGAIISCSVLGSLKHG-RQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLF 483
Query: 451 EGMKVKADFVVWGSLLGACRIH 472
M D + W +++ A H
Sbjct: 484 INMPC-VDAISWNAMIAALGQH 504
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 33/246 (13%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+ FN+ +KN + SW +I+ LA+ G + EAL+ F+ M+ P F AI SCS L
Sbjct: 380 SFFNEMPEKN-ILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVL 438
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G+Q H Q +G+ + +ALI MY++CG + A LF +P + +SW +
Sbjct: 439 GSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMP--CVDAISWNA 496
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ Q+ +A+ LF+E L E + D ++ +V+SACS + V
Sbjct: 497 MIAALGQHGQGTQAIELFEEMLKE------------GILPDRISFLTVISACSHAGL--V 542
Query: 207 TEGAHGFVIKRGFDSEVGVGNT---------LIDAYARGGHVDVSRKVFDGM-IEKDAVT 256
EG ++ FDS V +ID R G +++V + M E A
Sbjct: 543 KEG------RKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPI 596
Query: 257 WNSIIA 262
W +++A
Sbjct: 597 WEALLA 602
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/637 (35%), Positives = 365/637 (57%), Gaps = 35/637 (5%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSA 85
LF++ ++N V SW++++ G S++ +R M + +++P AI SC
Sbjct: 87 NLFDRMPERN-VVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCD 145
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ G+Q H GF +V +AL+ MYSKC + DA +++E+P + +IV++
Sbjct: 146 RGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVP--VNDIVAYN 203
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
S+L+ V+N RE L + + + S++V D V + S C+ +
Sbjct: 204 SILSSLVENGYLREGLEVLRSMV------------SESVKWDKVTFVNAFSLCASLKDLR 251
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ HG ++ + + V + +I+ Y + G ++R VFDG+ ++ V W +++A
Sbjct: 252 LGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCF 311
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QNG EAL++F +M + +VK N T + +L A A L R G +H K + V
Sbjct: 312 QNGCFEEALNLFSKM-EQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHV 370
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+VG ++I+MY K G ++ A+K F+ M +++ +W AMI G+ H ++AL +F M+ A
Sbjct: 371 MVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAA 430
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
PNY+TF VLSAC H GLVQEG+++L+ + +F ++PG+EHY C+V LL + G+L E
Sbjct: 431 EEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNE 490
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A + + VK D V W +LL AC +H+N LG A+ + E++PN+ G + LLSNIYA
Sbjct: 491 ARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAK 550
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
RW+ V + R LM+++++ K PG S +E+ H F D +HP + + Y+ ++EL
Sbjct: 551 EKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAM 610
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++ +GY D+ +V+HDV+ E+KE L HSEKLA NLR+C DC
Sbjct: 611 IKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDC 670
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H+ +RLISKV +R IVVRD+ RFH+F+DG CSC DYW
Sbjct: 671 HSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 136/275 (49%), Gaps = 2/275 (0%)
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
LSA ++ G T +H V R ++ + N+LI+ YA+ V ++ +FD M E++
Sbjct: 38 LSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNV 97
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
V+W++++ Y NG + + + + M+ +V N L+ + + G + G+ H
Sbjct: 98 VSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHG 157
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
++K V +++ MY KC V A +N++ ++ ++ ++++ + RE
Sbjct: 158 LLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLRE 217
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
L++ M+ V+ + +TFV+ S C+ ++ G H M ++E ++
Sbjct: 218 GLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTS-DVECDAYVSSAII 276
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
++ G+ GK A + +G++ + + V+W +++ +C
Sbjct: 277 NMYGKCGKSLMARGVFDGLQSR-NVVLWTAVMASC 310
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/630 (37%), Positives = 362/630 (57%), Gaps = 64/630 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ WN++ A D V AL+ + M L L P TFP +KSC+ G
Sbjct: 51 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEG 110
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR--------------- 137
+Q H G D++V ++LI MY + G L DA K+FDE P R
Sbjct: 111 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASR 170
Query: 138 --------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
++++VSW +M++GY + N +EAL LFK+ + N
Sbjct: 171 GYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM------------KTN 218
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V D + +V+SAC++ + H ++ GF S + + N LID Y++ G ++ +
Sbjct: 219 VRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETAC 278
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+F+G+ KD ++WN++I Y L EAL +F +M++S + N VT+ ++L A AHL
Sbjct: 279 GLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP-NDVTMLSILPACAHL 337
Query: 304 GVLRLGKCIH---DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
G + +G+ IH D+ +K + + + TS+IDMY KCG ++ A + FN + K++ SW
Sbjct: 338 GAIDIGRWIHVYIDKRLK-GVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 396
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
AMI G+ MH RA + D+F +M K G+ P+ ITFV +LSACSH+G++ G H +M +
Sbjct: 397 AMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQD 456
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
+ + P +EHYGCM+DLLG +G KEA ++I M+++ D V+W SLL AC++H NV+LGE
Sbjct: 457 YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGES 516
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
A+ L ++EP N G +VLLSNIYA AGRW +V TR+L+ ++ + K PG S +E+ VH
Sbjct: 517 FAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVH 576
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA- 599
F++GDK HP++ +IY LEE+ V L+E G+V D + V+ ++++E KE LR HSEKLA
Sbjct: 577 EFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 636
Query: 600 -----------------NLRVCGDCHTVIR 612
NLRVC +CH +
Sbjct: 637 AFGLISTKPGTKLTIVKNLRVCRNCHEAYK 666
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD---LARKAFNQMKEKNVRSWTA 361
+L+ + IH Q+IK L + + +I+ D A F ++E N+ W
Sbjct: 2 ILQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNT 61
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
M G+ + AL L+ MI G+ PN TF +L +C+ + +EG GH
Sbjct: 62 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQ---IHGHVL 118
Query: 422 NIEPGVEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
+ ++ Y ++ + + G+L++A+ + + + D V + +L+ ++
Sbjct: 119 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHR-DVVSYTALIKGYASRGYIE--- 174
Query: 480 IAAKKLFELEP--NNCGYHVLLSNIYANAGRW-EDVERTRSLMKN 521
A+K+F+ P + ++ ++S YA G + E +E + +MK
Sbjct: 175 -NAQKMFDEIPVKDVVSWNAMISG-YAETGNYKEALELFKDMMKT 217
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/637 (37%), Positives = 369/637 (57%), Gaps = 40/637 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ V +++V +WN +I A G +E + F MR + +R+ F A+K CS
Sbjct: 262 VFDSMVVRDSV-TWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQR 320
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L+ KQ H G+ + +AL+ YSKC + +A KLF + N+V+WT+M
Sbjct: 321 ELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFS-MADAAHNVVTWTAM 379
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASEN-SDNVFVDSVAIASVLSACSRVTVNGV 206
+ G+VQN+N +A+ LF C + E N F S +A S+ +
Sbjct: 380 IGGFVQNNNNEKAVDLF---------CQMSREGVRPNHFTYSTVLAGKPSS--------L 422
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H +IK ++ V L+DAY + G+V S +VF + KD V W++++ AQ
Sbjct: 423 LSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQ 482
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH-LGVLRLGKCIHDQVIKMDLEESV 325
+ +A++VF Q+VK VK N T S+V+ A + + GK IH +K ++
Sbjct: 483 TRDSEKAMEVFIQLVKE-GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNAL 541
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V ++++ MY K G ++ A K F + +E+++ SW +MI GYG H A++AL++F M
Sbjct: 542 CVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQ 601
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ + +TF+ VL+AC+HAGLV+EG + N M +++I+ +EHY CMVDL RAG +
Sbjct: 602 GLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDK 661
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A D+I GM A +W +LL ACR+H+N++LG++AA+KL L+PN+ +VLLSNI+A
Sbjct: 662 AMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAV 721
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
AG WE+ R LM R++ K G S +E++ ++ +FL GD HP + +Y LEEL++K
Sbjct: 722 AGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIK 781
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
L+++GY D V HDV++E KE L HSE+LA NLR+CGDC
Sbjct: 782 LKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDC 841
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H VI LIS + +R ++VRDS RFH+FK G+CSCG YW
Sbjct: 842 HNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 203/427 (47%), Gaps = 22/427 (5%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
+N ++ D +R EAL F + L T CA+K C L D G+Q H Q+
Sbjct: 72 YNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSL 131
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
GF DV V ++L+DMY K + D R +FDE+ I+N+VSWTS+L+GY +N E
Sbjct: 132 KSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMG--IKNVVSWTSLLSGYARNGLNDEV 189
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
+ L + +E G + N A+VL A + ++ H ++K GF+
Sbjct: 190 IHLINQMQME-----GVNPN-------GFTFATVLGALADESIIEGGVQVHAMIVKNGFE 237
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
V N LI Y + V + VFD M+ +D+VTWN +I YA G E +F +M
Sbjct: 238 FTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRM 297
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
+ VK + L + L K +H V+K E + + T+++ Y KC
Sbjct: 298 -RLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS 356
Query: 341 VDLARKAFNQM-KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
VD A K F+ NV +WTAMI G+ + +A+DLF +M + GVRPN+ T+ +VL+
Sbjct: 357 VDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLA 416
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
+ L Q + + P V ++D + G + E+ + + K D
Sbjct: 417 GKPSSLLSQLHAQIIKAY---YEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK-DI 470
Query: 460 VVWGSLL 466
V W ++L
Sbjct: 471 VAWSAML 477
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 161/353 (45%), Gaps = 38/353 (10%)
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
A +LFDE P +++I + +L + +N++ REAL LFK+ +S + V
Sbjct: 57 AHQLFDETP--LKDISHYNRLLFDFSRNNHDREALHLFKDL------------HSSGLGV 102
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D + ++ L C + V H +K GF +V VG +L+D Y + + R +F
Sbjct: 103 DGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIF 162
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D M K+ V+W S+++ YA+NGL E + + +QM + V N T + VL A+A ++
Sbjct: 163 DEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQM-QMEGVNPNGFTFATVLGALADESII 221
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
G +H ++K E + V ++I MY K V A F+ M ++ +W MI GY
Sbjct: 222 EGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGY 281
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGWHWLN 415
E +F++M AGV+ + F + L CS H G+V+ G+ +
Sbjct: 282 AAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQ 341
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ ++ + + EA+ L + V W +++G
Sbjct: 342 DI------------RTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/605 (38%), Positives = 345/605 (57%), Gaps = 34/605 (5%)
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM 117
LR + L PT + I +C+ +L ++ H F D F+ ++LI M
Sbjct: 36 LRDLDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHM 95
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
Y KC + DAR +FD++ R +++VSWTS++ GY QND EA+ L L + G
Sbjct: 96 YCKCRSVLDARNVFDQM--RRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNG- 152
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
AS+L A +G H +K G+ +V VG+ L+D YAR G
Sbjct: 153 -----------FTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCG 201
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
+D++ VFD + K+ V+WN++I+ +A+ G AL F +M+++ + T S+V
Sbjct: 202 KMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRN-GFEATHFTYSSVF 260
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
+IA LG L GK +H VIK + + VG +++DMY K G + ARK F+++ K++
Sbjct: 261 SSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLV 320
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
+W +M+ + + +EA+ F +M K+GV N ITF+ +L+ACSH GLV+EG + M
Sbjct: 321 TWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMM 380
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
E+++EP ++HY +V LLGRAG L A I M ++ VWG+LL ACR+HKN +
Sbjct: 381 -KEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKV 439
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG 537
G+ AA +FEL+P++ G VLL NIYA+ G+W+ R R +MK + K P S VE+
Sbjct: 440 GQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMEN 499
Query: 538 KVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
VH F+ D HPQ E+IY+ E++ K+++ GYV DM V+ VD +EKE L+ HSEK
Sbjct: 500 SVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEK 559
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA N+R+CGDCH+ + ISKV REIVVRD+ RFH+F G CS
Sbjct: 560 LALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCS 619
Query: 640 CGDYW 644
CGDYW
Sbjct: 620 CGDYW 624
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 175/340 (51%), Gaps = 16/340 (4%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ ++ SW S+IA A+ VEA+ M K P TF +K+ A D +G+Q
Sbjct: 114 RKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQ 173
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H A G+H DV+V SAL+DMY++CG++ A +FD++ +N VSW ++++G+ +
Sbjct: 174 IHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDS--KNGVSWNALISGFARK 231
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+ AL+ F E L E +SV S+ +R+ + H V
Sbjct: 232 GDGESALMTFAEMLRNGFE------------ATHFTYSSVFSSIARLGALEQGKWVHAHV 279
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
IK VGNTL+D YA+ G + +RKVFD + KD VTWNS++ +AQ GL EA+
Sbjct: 280 IKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAV 339
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
F++M KS V N +T +L A +H G+++ GK + + + DLE + +++ +
Sbjct: 340 SHFEEMRKS-GVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVAL 398
Query: 335 YCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAR 373
+ G ++ A +M E W A++A MH A+
Sbjct: 399 LGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK 438
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 161/382 (42%), Gaps = 67/382 (17%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
T +F+K KN V SWN++I+ AR GD AL F+ M + T T+ S +
Sbjct: 207 TAVFDKLDSKNGV-SWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIAR 265
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L L GK H FV + L+DMY+K G + DARK+FD + +++V+W
Sbjct: 266 LGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDN--KDLVTWN 323
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
SMLT + Q +EA+ F+E V+++ + +L+ACS +
Sbjct: 324 SMLTAFAQYGLGKEAVSHFEEM------------RKSGVYLNQITFLCILTACSHGGL-- 369
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
V EG F + + +D E ID Y +++A+
Sbjct: 370 VKEGKRYFEMMKEYDLE-----PEIDHYV------------------------TVVALLG 400
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+ GL AL +M ++ A A+L A ++G+ D V ++D ++S
Sbjct: 401 RAGLLNYALVFIFKM----PMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDS- 455
Query: 326 IVGTSII--DMYCKCGQVDLARKAFNQMKEKNVR-----SWTAM-------IAGYGMHCR 371
G ++ ++Y GQ D A + MK V+ SW M +A H +
Sbjct: 456 --GPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQ 513
Query: 372 AREALDLFYKMIKAGVRPNYIT 393
A E ++ ++ K + Y+
Sbjct: 514 AEEIYKMWGEISKKIRKEGYVP 535
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/588 (40%), Positives = 341/588 (57%), Gaps = 34/588 (5%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
+ ++SC A L +G+Q H + + G D +++ L+D+Y+ CG + AR+LFD +P
Sbjct: 65 YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+R N+ W ++ Y ++ A+ L++ + V D+ L
Sbjct: 125 KR--NVFLWNVLIRAYARDGPHEVAIQLYRGMV------------DYGVEPDNFTYPLAL 170
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
AC+ + H V+ + ++ V L+D YA+ G VD +R VFD + +D+V
Sbjct: 171 KACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSV 230
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
WNS+IA Y QNG EAL + M + V TL + + A A L G+ +H
Sbjct: 231 VWNSMIAAYGQNGRPMEALSLCRDMA-ANGVGPTIATLVSTISAAADAAALPRGRELHGF 289
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+ + + TS++DMY K G V +AR F Q+ ++ + SW AMI GYGMH EA
Sbjct: 290 GWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEA 349
Query: 376 LDLFYKM-IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
L LF KM ++A V P+ ITFV VLSAC+H G+V+E + M ++I+P V+H+ C+V
Sbjct: 350 LKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLV 409
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCG 494
D+LG AG+ +EAYDLI+GM ++ D +WG+LL C+IHKNV+LGE+A +KL ELEP + G
Sbjct: 410 DVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAG 469
Query: 495 YHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEK 554
+VLLSNIYA +G+WE R R LM NR L K G S +EL+GK H FLVGD HP+ +
Sbjct: 470 NYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAE 529
Query: 555 IYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------------- 599
IYE LE L + + GY+ D V HDV +EK +R HSE+LA
Sbjct: 530 IYEELERLEGLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLL 589
Query: 600 ---NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH VI+LIS++V REI++RD R+H+F +G CSC DYW
Sbjct: 590 VTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 176/339 (51%), Gaps = 16/339 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K NVF WN +I AR G A++ + M + P T+P A+K+C+AL DL +G
Sbjct: 123 MPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETG 182
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ H++ + D+FV + L+DMY+KCG + DAR +FD I R+R+ V W SM+ Y
Sbjct: 183 REVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRI--RVRDSVVWNSMIAAYG 240
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN EAL L ++ ++ V + S +SA + HG
Sbjct: 241 QNGRPMEALSLCRDM------------AANGVGPTIATLVSTISAAADAAALPRGRELHG 288
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
F +RGFD + + +L+D YA+ G V V+R +F+ +++++ V+WN++I Y +G E
Sbjct: 289 FGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDE 348
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSI 331
AL +F++M V + +T VL A H G+++ K ++ + ++ +V T +
Sbjct: 349 ALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCL 408
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+D+ G+ + A M + + W A++ G +H
Sbjct: 409 VDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIH 447
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/634 (37%), Positives = 357/634 (56%), Gaps = 42/634 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSM----RKLSLTPTRSTFPCAIKSCSALHD 88
+ + ++ SWNS+I A G +A+ F M ++L T S P ++S H
Sbjct: 45 MPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQS----HY 100
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
G H + G + + +AL+DMYS C + K+F + Q+ N+VSWT+M+
Sbjct: 101 SFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQK--NVVSWTAMI 158
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
T Y + + + LF+E LE + D AI S L A + +
Sbjct: 159 TSYTRAGHFDKVAGLFQEMGLE------------GIRPDVFAITSALDAFAGNESLKHGK 206
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
HG+ I+ G + + V N L++ Y + G+++ +R +FD + +KD ++WN++I Y+++
Sbjct: 207 SVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSN 266
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
LA EA +F++M+ ++ NAVT++ +L A A L L G+ +H ++ E V
Sbjct: 267 LANEAFTLFNEML--LQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVA 324
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
+++DMY KCG + LAR+ F+ + KN+ SWT MIAGYGMH R R+A+ LF +M +G++
Sbjct: 325 NALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQ 384
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+ +F ++L ACSH+GL EGW + N M +E IEP ++HY CMVDLL G LKEAY+
Sbjct: 385 PDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYE 444
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
IE M ++ D +W SLL CRIH+NV L E A+ +FELEP N GY+VLL+NIYA A R
Sbjct: 445 FIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAER 504
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
WE V + ++ + R L + G S +E+RGK H F ++ HPQ +I E+L+++ ++QE
Sbjct: 505 WEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQE 564
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
G+ + D + L HS KLA N RVC CH
Sbjct: 565 EGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEA 624
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ ISK+ REI++RDS RFH+F++G CSC YW
Sbjct: 625 AKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 182/385 (47%), Gaps = 26/385 (6%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G H +GF V +ALI Y+K + DA +FDE+PQ R+I+SW S++ G
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQ--RDIISWNSIIGGC 60
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
N +A+ LF LE E +DS + SV+ AC + + + H
Sbjct: 61 ASNGLYDKAVELFVRMWLEGQE------------LDSTTLLSVMPACVQSHYSFIGGVVH 108
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
G+ ++ G SE +GN L+D Y+ + K+F M +K+ V+W ++I Y + G
Sbjct: 109 GYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFD 168
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+ +F +M ++ + +++ L A A L+ GK +H I+ +EE + V ++
Sbjct: 169 KVAGLFQEM-GLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANAL 227
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
++MY KCG ++ AR F+ + +K+ SW +I GY A EA LF +M+ +RPN
Sbjct: 228 MEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNA 286
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAY 447
+T +L A + ++ G H + + G +VD+ + G L A
Sbjct: 287 VTMACILPAAASLSSLERGREM-----HAYAVRRGYLEDNFVANALVDMYVKCGALLLAR 341
Query: 448 DLIEGMKVKADFVVWGSLLGACRIH 472
L + M + + W ++ +H
Sbjct: 342 RLFD-MLTNKNLISWTIMIAGYGMH 365
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 182/369 (49%), Gaps = 18/369 (4%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L +S+ + + ++ + ++ T + +++ NV SW ++I R G + F
Sbjct: 116 LISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQ 175
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
M + P A+ + + L GK H A G + V++AL++MY KCG
Sbjct: 176 EMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCG 235
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+ +AR +FD + + ++ +SW +++ GY +++ A EA LF E LL+
Sbjct: 236 YMEEARFIFDHVTK--KDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ------------ 281
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
+ ++V +A +L A + ++ H + ++RG+ + V N L+D Y + G + ++
Sbjct: 282 -LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLA 340
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
R++FD + K+ ++W +IA Y +G +A+ +F+QM K + ++ +A + SA+L A +H
Sbjct: 341 RRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQM-KGSGIQPDAGSFSAILYACSH 399
Query: 303 LGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWT 360
G+ G + + + +E + ++D+ C G + A + M E + W
Sbjct: 400 SGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWV 459
Query: 361 AMIAGYGMH 369
+++ G +H
Sbjct: 460 SLLRGCRIH 468
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 150/313 (47%), Gaps = 16/313 (5%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG+++K GF ++ V N LI YA+ ++ + VFD M ++D ++WNSII A NGL
Sbjct: 7 HGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLY 66
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+A+++F +M + ++ TL +V+ A +G +H ++ L +G +
Sbjct: 67 DKAVELFVRMWLEGQ-ELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNA 125
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++DMY C K F M++KNV SWTAMI Y + LF +M G+RP+
Sbjct: 126 LLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPD 185
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEA 446
S L A + ++ G H + I G+E ++++ + G ++EA
Sbjct: 186 VFAITSALDAFAGNESLKHG-----KSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEA 240
Query: 447 YDLIEGMKVKADFVVWGSLLGA-CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
+ + + K D + W +L+G R + + + + L +L PN V ++ I
Sbjct: 241 RFIFDHV-TKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNA----VTMACILPA 295
Query: 506 AGRWEDVERTRSL 518
A +ER R +
Sbjct: 296 AASLSSLERGREM 308
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/637 (37%), Positives = 369/637 (57%), Gaps = 40/637 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ V +++V +WN +I A G +E + F MR + +R+ F A+K CS
Sbjct: 262 VFDSMVVRDSV-TWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQR 320
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L+ KQ H G+ + +AL+ YSKC + +A KLF + N+V+WT+M
Sbjct: 321 ELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFS-MADAAHNVVTWTAM 379
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASEN-SDNVFVDSVAIASVLSACSRVTVNGV 206
+ G+VQN+N ++A+ LF C + E N F S +A S+ +
Sbjct: 380 IGGFVQNNNNKKAVDLF---------CQMSREGVRPNHFTYSTVLAGKPSS--------L 422
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H +IK ++ V L+DAY + G+V S +VF + KD V W++++ AQ
Sbjct: 423 LSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQ 482
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH-LGVLRLGKCIHDQVIKMDLEESV 325
+ +A++VF Q+VK VK N T S+V+ A + + GK IH +K ++
Sbjct: 483 TRDSEKAMEVFIQLVKE-GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNAL 541
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V ++++ MY K G ++ A K F + +E+++ SW +MI GYG H A++AL++F M
Sbjct: 542 CVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQ 601
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ + +TF+ VL+AC+HAGLV+EG + N M +++I+ EHY CMVDL RAG +
Sbjct: 602 GLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDK 661
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A D+I GM A +W +LL ACR+H+N++LG++AA+KL L+PN+ +VLLSNI+A
Sbjct: 662 AMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAV 721
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
AG WE+ R LM R++ K G S +E++ ++ +FL GD HP + +Y LEEL++K
Sbjct: 722 AGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIK 781
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
L+++GY D V HDV++E KE L HSE+LA NLR+CGDC
Sbjct: 782 LKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDC 841
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H VI LIS + +R ++VRDS RFH+FK G+CSCG YW
Sbjct: 842 HNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 204/427 (47%), Gaps = 22/427 (5%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
+N ++ D +R EAL F + L T CA+K C L D G+Q H Q+
Sbjct: 72 YNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSL 131
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
GF DV V ++L+DMY K + D R +FDE+ I+N+VSWTS+L+GY +N E
Sbjct: 132 KSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMG--IKNVVSWTSLLSGYARNGLNDEV 189
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
+ L + +E G + N A+VL A + ++ H ++K GF+
Sbjct: 190 IHLINQMQME-----GVNPN-------GFTFATVLGALADESIIEGGVQVHAMIVKNGFE 237
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
V N LI Y + V + VFD M+ +D+VTWN +I YA G E +F +M
Sbjct: 238 FTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRM 297
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
+ VK + L + L K +H V+K E + + T+++ Y KC
Sbjct: 298 -RLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS 356
Query: 341 VDLARKAFNQM-KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
VD A K F+ NV +WTAMI G+ + ++A+DLF +M + GVRPN+ T+ +VL+
Sbjct: 357 VDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLA 416
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
+ L Q + + P V ++D + G + E+ + + K D
Sbjct: 417 GKPSSLLSQLHAQIIKAY---YEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK-DI 470
Query: 460 VVWGSLL 466
V W ++L
Sbjct: 471 VAWSAML 477
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 161/353 (45%), Gaps = 38/353 (10%)
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
A +LFDE P +++I + +L + +N++ REAL LFK+ +S + V
Sbjct: 57 AHQLFDETP--LKDISHYNRLLFDFSRNNHDREALHLFKDL------------HSSGLGV 102
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D + ++ L C + V H +K GF +V VG +L+D Y + + R +F
Sbjct: 103 DGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIF 162
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D M K+ V+W S+++ YA+NGL E + + +QM + V N T + VL A+A ++
Sbjct: 163 DEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQM-QMEGVNPNGFTFATVLGALADESII 221
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
G +H ++K E + V ++I MY K V A F+ M ++ +W MI GY
Sbjct: 222 EGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGY 281
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGWHWLN 415
E +F++M AGV+ + F + L CS H G+V+ G+ +
Sbjct: 282 AAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQ 341
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ ++ + + EA+ L + V W +++G
Sbjct: 342 DI------------RTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/663 (36%), Positives = 368/663 (55%), Gaps = 78/663 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +V SWN +++ L++ G + EAL M + +T+ ++ +C+ L L G
Sbjct: 254 MPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWG 313
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H Q D +V+SA++++Y+KCG +AR++F + R RN VSWT ++ G++
Sbjct: 314 KQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSL--RDRNTVSWTVLIGGFL 371
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q E+L LF + ++ + VD A+A+++S CS + H
Sbjct: 372 QYGCFSESLELFNQM------------RAELMTVDQFALATIISGCSNRMDMCLARQLHS 419
Query: 213 FVIKRGFDSEVGVGNTLID-------------------------------AYARGGHVDV 241
+K G V + N+LI AY++ G++
Sbjct: 420 LSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGK 479
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R+ FDGM ++ +TWN+++ Y Q+G + L ++ M+ DV + VT + A
Sbjct: 480 AREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCA 539
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+G +LG I +K+ L V ++I MY KCG++ ARK F+ + K++ SW A
Sbjct: 540 DMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNA 599
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MI GY H ++A+++F M+K G +P+YI++V+VLS+CSH+GLVQEG + + + +
Sbjct: 600 MITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDH 659
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
N+ PG+EH+ CMVDLL RAG L EA +LI+ M +K VWG+LL AC+ H N +L E+A
Sbjct: 660 NVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELA 719
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
AK LF+L+ + G ++LL+ IYA+AG+ D + R LM+++ + K PG+S +E++ KVH
Sbjct: 720 AKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHV 779
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYV--TDMTSVIHDVDQEEKEMTLRIHSEKLA 599
F D HPQ I E L+EL K+ ++GYV + S IH HSEKLA
Sbjct: 780 FKAEDVSHPQVIAIREKLDELMEKIAQLGYVRTESLRSEIH-------------HSEKLA 826
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLR+CGDCHTVI+LIS V RE V+RD+ RFH+FK G CSCG
Sbjct: 827 VAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFKGGSCSCG 886
Query: 642 DYW 644
DYW
Sbjct: 887 DYW 889
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 231/482 (47%), Gaps = 31/482 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSAL 86
LF + + + +V SWN++++ + G ++A+ +F SMR+ + P TF CA+KSC AL
Sbjct: 117 LFGR-MPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGAL 175
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
Q FGF D V++ ++DM+ +CG + A K F +I + + S
Sbjct: 176 GWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIER--PTVFCRNS 233
Query: 147 MLTGYVQNDNAREALLLFKEFLLEE-----------SECGGASE--------NSDNVFVD 187
ML GY ++ AL LF+ + S+ G A E ++ V +D
Sbjct: 234 MLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLD 293
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
S S L+AC++++ G + H VI+ + V + +++ YA+ G +R+VF
Sbjct: 294 STTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFS 353
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ +++ V+W +I + Q G +E+L++F+QM ++ + + L+ ++ ++ +
Sbjct: 354 SLRDRNTVSWTVLIGGFLQYGCFSESLELFNQM-RAELMTVDQFALATIISGCSNRMDMC 412
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
L + +H +K +V++ S+I MY KCG + A F+ M+E+++ SWT M+ Y
Sbjct: 413 LARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYS 472
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+A + F M N IT+ ++L A G ++G + M E ++ P
Sbjct: 473 QVGNIGKAREFFDGMSTR----NVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDW 528
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA-AKKLF 486
Y + G K D I G VK ++ S++ A I G I+ A+K+F
Sbjct: 529 VTYVTLFRGCADMGANKLG-DQITGHTVKVGLILDTSVMNAV-ITMYSKCGRISEARKIF 586
Query: 487 EL 488
+
Sbjct: 587 DF 588
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 131/302 (43%), Gaps = 47/302 (15%)
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
G A G + + V N +++ YA+ G + + ++F M +D +WN++++ Y
Sbjct: 77 GALPDARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGY 136
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
Q+G +A++ F M +S D NA T + + LG + + + K +
Sbjct: 137 YQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGD 196
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQ-------------------------------MKE 353
V T I+DM+ +CG VD A K F+Q M E
Sbjct: 197 PDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPE 256
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
++V SW M++ RAREAL + M GVR + T+ S L+AC A L GW
Sbjct: 257 RDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTAC--AKLSSLGW-- 312
Query: 414 LNTMGHEFNIE-----PGVEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
G + + + P ++ Y MV+L + G KEA + ++ + + V W L+
Sbjct: 313 ----GKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDR-NTVSWTVLI 367
Query: 467 GA 468
G
Sbjct: 368 GG 369
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 14/178 (7%)
Query: 6 SSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR 65
+S +++V++ K + +F+ ++ + ++ SWN++I ++ G +A+ F M
Sbjct: 563 TSVMNAVITMYSKCGRISEARKIFD-FLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDML 621
Query: 66 KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVS------SALIDMYS 119
K P ++ + SCS HSG + + RD VS S ++D+ +
Sbjct: 622 KKGAKPDYISYVAVLSSCS-----HSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLA 676
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE-FLLEESECGG 176
+ G L +A+ L DE+P + V W ++L+ + N A L K F L+ + GG
Sbjct: 677 RAGNLIEAKNLIDEMPMKPTAEV-WGALLSACKTHGNNELAELAAKHLFDLDSPDSGG 733
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/637 (36%), Positives = 370/637 (58%), Gaps = 36/637 (5%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
T+F+ + + ++ SWNSVIA +A+ G VEA+ F + + L P + T +K+ S+L
Sbjct: 371 TVFDN-MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL 429
Query: 87 HD-LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ L KQ H A D FVS+ALID YS+ + +A LF+ + ++V+W
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE---RHNFDLVAWN 486
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M+ GY Q+ + + L LF L+ + E SD+ +A+V C +
Sbjct: 487 AMMAGYTQSHDGHKTLKLFA--LMHKQ-----GERSDDF-----TLATVFKTCGFLFAIN 534
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H + IK G+D ++ V + ++D Y + G + ++ FD + D V W ++I+
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCI 594
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+NG A VF QM + V + T++ + A + L L G+ IH +K++
Sbjct: 595 ENGEEERAFHVFSQM-RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDP 653
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VGTS++DMY KCG +D A F +++ N+ +W AM+ G H +E L LF +M
Sbjct: 654 FVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSL 713
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G++P+ +TF+ VLSACSH+GLV E + + +M ++ I+P +EHY C+ D LGRAG +K+
Sbjct: 714 GIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQ 773
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A +LIE M ++A ++ +LL ACR+ + + G+ A KL ELEP + +VLLSN+YA
Sbjct: 774 AENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAA 833
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
A +W++++ R++MK ++ K PGFS +E++ K+H F+V D+ + Q E IY ++++
Sbjct: 834 ASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRD 893
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
+++ GYV + + DV++EEKE L HSEKLA NLRVCGDC
Sbjct: 894 IKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDC 953
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H ++ I+KV +REIV+RD+ RFH FKDG+CSCGDYW
Sbjct: 954 HNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 198/430 (46%), Gaps = 27/430 (6%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N +++ G L+ F+ M + + + TF + + + L G+Q H A
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
G + VS++LI+MY K + AR +FD + + R+++SW S++ G QN EA+
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE--RDLISWNSVIAGIAQNGLEVEAV 401
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN-GVTEGAHGFVIKRGFD 220
LF + L CG + D + SVL A S + +++ H IK
Sbjct: 402 CLFMQLL----RCG--------LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNV 449
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
S+ V LIDAY+R + + +F+ D V WN+++A Y Q+ + L +F M
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
K + + + TL+ V L + GK +H IK + + V + I+DMY KCG
Sbjct: 509 HKQGE-RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 567
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+ A+ AF+ + + +WT MI+G + A +F +M GV P+ T ++ A
Sbjct: 568 MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKA 627
Query: 401 CSHAGLVQEGWHW-LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL---IEGMKVK 456
S +++G N + +P V +VD+ + G + +AY L IE M +
Sbjct: 628 SSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNIT 685
Query: 457 ADFVVWGSLL 466
A W ++L
Sbjct: 686 A----WNAML 691
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 228/531 (42%), Gaps = 84/531 (15%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSV-----EALRAFSS 63
+++++S K + T +F+K D++ V SWNS++A A+ + V +A F
Sbjct: 77 INNLISMYSKCGSLTYARRVFDKMPDRDLV-SWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSG-----KQAHQQAFIFGFHRDVFVSSALIDMY 118
+R+ + +R T +K C LHSG + H A G D FV+ AL+++Y
Sbjct: 136 LRQDVVYTSRMTLSPMLKLC-----LHSGYVWASESFHGYACKIGLDGDEFVAGALVNIY 190
Query: 119 SKCGELSDARKLFD-----------------------------------------EIPQR 137
K G++ + + LF+ EI R
Sbjct: 191 LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLR 250
Query: 138 IRNIVSWTSMLTGYVQ-----NDNAREALLLFKEFLLEESECGG---------ASENSDN 183
+ +S G V+ ND + + ++F+ L E G A +
Sbjct: 251 LLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESD 310
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V D V +L+ +V + + H +K G D + V N+LI+ Y + +R
Sbjct: 311 VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFAR 370
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VFD M E+D ++WNS+IA AQNGL EA+ +F Q+++ +K + T+++VL A + L
Sbjct: 371 TVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR-CGLKPDQYTMTSVLKAASSL 429
Query: 304 GV-LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
L L K +H IK++ V T++ID Y + + A F + ++ +W AM
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAM 488
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
+AGY + L LF M K G R + T +V C + +G H +
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG-----KQVHAYA 543
Query: 423 IEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
I+ G + ++D+ + G + A + + V D V W +++ C
Sbjct: 544 IKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD-VAWTTMISGC 593
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL GK H + F + + F+ + LI MYSKCG L+ AR++FD++P R ++VSW S+
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR--DLVSWNSI 111
Query: 148 LTGYVQN-----DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
L Y Q+ +N ++A LLF+ +L + D V+ + ++ +L C
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFR--ILRQ----------DVVYTSRMTLSPMLKLCLHSG 159
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+E HG+ K G D + V L++ Y + G V + +F+ M +D V WN ++
Sbjct: 160 YVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
Y + G EA+D+ S+ + N +TL
Sbjct: 220 AYLEMGFKEEAIDL-SSAFHSSGLNPNEITL 249
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L LGKC H +++ + + ++I MY KCG + AR+ F++M ++++ SW +++A
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 366 YGMHCRA-----REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
Y ++A LF + + V + +T +L C H+G V W + H
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-----WASESFHG 169
Query: 421 FNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ + G++ G +V++ + GK+KE L E M + D V+W +L A
Sbjct: 170 YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 255/679 (37%), Positives = 354/679 (52%), Gaps = 102/679 (15%)
Query: 57 ALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
A + SM L T+P I++CS KQ H GF DV+V + LI+
Sbjct: 197 AFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLIN 256
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA---------------- 160
+S C ++DA ++F+E + + VSW S+L GY++ N EA
Sbjct: 257 CFSVCSNMTDACRVFNE--SSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASN 314
Query: 161 ---------------LLLFKEFL-------------------LEESECGGASENSDNVFV 186
LF E L EE+ + V V
Sbjct: 315 SMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMV 374
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK-- 244
D V S LSAC+ + V + + H +K G +S + + N LI Y++ G + V+RK
Sbjct: 375 DEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLF 434
Query: 245 -----------------------------VFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+FD M EKD V+W+S+I+ YAQN L E L
Sbjct: 435 DEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLA 494
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F +M + + K + TL +V+ A A L L GK +H + + L +VI+GT++IDMY
Sbjct: 495 LFQEM-QMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMY 553
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG V+ A + F M EK + +W A+I G M+ +LD+F M K V PN ITF+
Sbjct: 554 MKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFM 613
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
VL AC H GLV EG H +M H+ I+P V+HYGCMVDLLGRAGKL+EA +L+ M +
Sbjct: 614 GVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPM 673
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
D WG+LLGAC+ H + ++G +KL EL+P++ G+HVLLSNIYA+ G+W+DV
Sbjct: 674 TPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEI 733
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
R +M R+ K PG S++E G +H FL GDK HP + I + L E+ +KL+ GY D+
Sbjct: 734 RGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDI 793
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
V+ DVD+EEKE TL HSEKLA NLR+C DCHT +LISK
Sbjct: 794 NEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKA 853
Query: 618 VDREIVVRDSKRFHYFKDG 636
R+IVVRD RFH+F+ G
Sbjct: 854 FCRKIVVRDRHRFHHFEQG 872
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 200/409 (48%), Gaps = 59/409 (14%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ ++K+ V +W+++IA + EA+R F M K+ + A+ +C+ L
Sbjct: 332 LFDEMLEKDMV-TWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLL 390
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDE-------------- 133
++ GK H + G + + +ALI MYSKCG++ ARKLFDE
Sbjct: 391 VVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 450
Query: 134 -----------------IPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
+P++ ++VSW+SM++GY QND E L LF+E + +
Sbjct: 451 GYLKCNLVDNAKAIFDSMPEK--DVVSWSSMISGYAQNDLFDETLALFQEMQMSGFK--- 505
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
D + SV+SAC+R+ + H ++ + G V +G TLID Y +
Sbjct: 506 ---------PDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKC 556
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G V+ + +VF GMIEK TWN++I A NGL +LD+F M K V N +T V
Sbjct: 557 GCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNM-KKCHVTPNEITFMGV 615
Query: 297 LLAIAHLGVLRLGK-----CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
L A H+G++ G+ IHD I+ +++ ++D+ + G++ A + N+M
Sbjct: 616 LGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHY----GCMVDLLGRAGKLQEAEELLNRM 671
Query: 352 K-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+V +W A++ H + + K+I+ ++P++ F +LS
Sbjct: 672 PMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPDHDGFHVLLS 718
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/639 (37%), Positives = 371/639 (58%), Gaps = 37/639 (5%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++F VDK++V SWNS+I L + +A+++++SMRK L P+ A+ SC++L
Sbjct: 159 SVFGLMVDKDSV-SWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASL 217
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ G+Q H + G DV VS+ L+ +Y++ L++ +K+F + +R + VSW +
Sbjct: 218 GCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLER--DQVSWNT 275
Query: 147 MLTGYVQND-NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
++ + + EA+ +F E + G S N V ++L+ S ++ +
Sbjct: 276 VIGALADSGASVSEAIEVFLEMMR-----AGWSPNR-------VTFINLLATVSSLSTSK 323
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK-DAVTWNSIIAIY 264
++ H ++K + + N L+ Y + G ++ ++F M E+ D V+WNS+I+ Y
Sbjct: 324 LSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGY 383
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
N L +A+D+ M++ + + T + VL A A + L G +H I+ LE
Sbjct: 384 IHNELLCKAMDLVWLMMQRGQ-RLDCFTFATVLSACATVATLECGMEVHACAIRACLESD 442
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V++G++++DMY KCG++D A + FN M +N+ SW +MI+GY H AL LF +M
Sbjct: 443 VVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKL 502
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
+G P++ITFV VLSACSH GLV EG+ + +M + + P VEHY CMVDLLGRAG+L
Sbjct: 503 SGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELD 562
Query: 445 EAYDLIEGMKVKADFVVWGSLLGAC--RIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
+ + I M +K + ++W ++LGAC + +LG AA+ LF ++P N +VLLSN+
Sbjct: 563 KIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNM 622
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
YA+ G+WED+ RTR M+ + K G S V ++ VH F+ GD HP+ IY L+EL
Sbjct: 623 YASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKEL 682
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------NLRVCG 605
+ K+++ GYV + ++D++ E KE L HSEKLA NLRVCG
Sbjct: 683 DKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAFVLTRNSGLPIRIMKNLRVCG 742
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH+ + ISKVVDR IV+RDS RFH+F+DG CSC DYW
Sbjct: 743 DCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 195/374 (52%), Gaps = 19/374 (5%)
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H GF D+F+ + LI++Y + G+ ARKLFDE+P RN V+W +++GY QN
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPD--RNGVTWACLISGYTQNG 80
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV-NGVTEGAHGFV 214
+A + KE + E + A S + AC + HG+
Sbjct: 81 MPEDACGVLKEMIFE------------GFLPNRFAFGSAIRACQESMLWRRKGRQVHGYA 128
Query: 215 IKRGF-DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
I+ G D++V VGN LI+ YA+ G +D +R VF M++KD+V+WNS+I QN +A
Sbjct: 129 IRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDA 188
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+ ++ M K+ + N +SA L + A LG + LG+ H + IK+ L+ V V +++
Sbjct: 189 VKSYNSMRKTGLMPSNFALISA-LSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLA 247
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG-MHCRAREALDLFYKMIKAGVRPNYI 392
+Y + ++ +K F+ M E++ SW +I EA+++F +M++AG PN +
Sbjct: 248 LYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRV 307
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+++L+ S + H ++ + ++N++ ++ G++G+++ ++
Sbjct: 308 TFINLLATVSSLSTSKLS-HQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSR 366
Query: 453 MKVKADFVVWGSLL 466
M + D V W S++
Sbjct: 367 MSERRDEVSWNSMI 380
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 226/453 (49%), Gaps = 22/453 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCS-AL 86
LF++ D+N V +W +I+ + G +A M P R F AI++C ++
Sbjct: 57 LFDEMPDRNGV-TWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESM 115
Query: 87 HDLHSGKQAHQQAFIFGFH-RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
G+Q H A G + V V + LI+MY+KCG++ AR +F + ++ VSW
Sbjct: 116 LWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVD--KDSVSWN 173
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
SM+TG QN +A+ + S + + A+ S LS+C+ +
Sbjct: 174 SMITGLDQNKCFEDAVKSYN------------SMRKTGLMPSNFALISALSSCASLGCIL 221
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ + HG IK G D +V V NTL+ YA + +KVF M+E+D V+WN++I A
Sbjct: 222 LGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALA 281
Query: 266 QNGLA-AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
+G + +EA++VF +M+++ N VT +L ++ L +L IH ++K ++++
Sbjct: 282 DSGASVSEAIEVFLEMMRA-GWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDD 340
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR-SWTAMIAGYGMHCRAREALDLFYKMI 383
+ +++ Y K G+++ + F++M E+ SW +MI+GY + +A+DL + M+
Sbjct: 341 NAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMM 400
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ G R + TF +VLSAC+ ++ G ++ +E V +VD+ + G++
Sbjct: 401 QRGQRLDCFTFATVLSACATVATLECGME-VHACAIRACLESDVVIGSALVDMYSKCGRI 459
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
A M V+ + W S++ H + D
Sbjct: 460 DYASRFFNLMPVR-NLYSWNSMISGYARHGHGD 491
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 132/259 (50%), Gaps = 3/259 (1%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H V+K GFDS++ + NTLI+ Y R G +RK+FD M +++ VTW +I+ Y QNG+
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES-VIVGT 329
+A V +M+ + SA+ + R G+ +H I+ L ++ V VG
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+I+MY KCG +D AR F M +K+ SW +MI G + +A+ + M K G+ P
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ +S LS+C+ G + G + G + ++ V ++ L +L E +
Sbjct: 203 SNFALISALSSCASLGCILLG-QQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKV 261
Query: 450 IEGMKVKADFVVWGSLLGA 468
M ++ D V W +++GA
Sbjct: 262 FSWM-LERDQVSWNTVIGA 279
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 20/243 (8%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N +F++ ++ + SWNS+I+ +A+ M + TF + +C
Sbjct: 359 NCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSAC 418
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ + L G + H A DV + SAL+DMYSKCG + A + F+ +P +RN+ S
Sbjct: 419 ATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMP--VRNLYS 476
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W SM++GY ++ + AL LF L D + VLSACS + +
Sbjct: 477 WNSMISGYARHGHGDNALRLFTRMKLSGQ------------LPDHITFVGVLSACSHIGL 524
Query: 204 NGVTEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNS 259
V EG F G V + ++D R G +D + M I+ + + W +
Sbjct: 525 --VDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRT 582
Query: 260 IIA 262
++
Sbjct: 583 VLG 585
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/574 (38%), Positives = 349/574 (60%), Gaps = 20/574 (3%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN D+ NV WN ++ + D ++ F M+ + P + T+PC +++C+
Sbjct: 301 IFNS-SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ G+Q H + GF D++VS LIDMYSK G L AR++ + + ++ ++VSWTSM
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK--DVVSWTSM 417
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GYVQ++ ++AL FKE +CG ++ D++ +AS +S C+ +N +
Sbjct: 418 IAGYVQHECCKDALAAFKEM----QKCG--------IWPDNIGLASAISGCA--GINAMR 463
Query: 208 EG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+G H + G+ +V + N L++ YAR G + + F+ + KD +TWN +++ +A
Sbjct: 464 QGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFA 523
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q+GL EAL VF +M +S VK N T + L A A+L ++ GK IH +VIK
Sbjct: 524 QSGLHEEALKVFMRMDQS-GVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFET 582
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VG ++I +Y KCG + A+ F++M E+N SW +I H R EALDLF +M K
Sbjct: 583 EVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKE 642
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G++PN +TF+ VL+ACSH GLV+EG + +M E+ I P +HY C++D+ GRAG+L
Sbjct: 643 GIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDR 702
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A IE M + AD +VW +LL AC++HKN+++GE AAK L ELEP++ +VLLSN YA
Sbjct: 703 AKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAV 762
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
+W + ++ R +M++R + K PG S +E++ VHAF VGD+ HP E+IY +L +N +
Sbjct: 763 TEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDR 822
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
+ +VGY + + HD +QE ++ T +HSEKLA
Sbjct: 823 VAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLA 856
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 226/441 (51%), Gaps = 22/441 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F + ++NV SW ++++ A+ G EAL + M + + PT + SC+
Sbjct: 99 VFEELSARDNV-SWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAE 157
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H Q + GF ++FV +A+I +Y +CG A ++F ++P R+ V++ ++
Sbjct: 158 LFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPH--RDTVTFNTL 215
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G+ Q + AL +F EE + G S D V I+S+L+AC+ ++ +
Sbjct: 216 ISGHAQCGHGEHALEIF-----EEMQFSGLSP-------DCVTISSLLAACA--SLGDLQ 261
Query: 208 EGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+G H ++ K G S+ + +L+D Y + G V+ + +F+ + V WN ++ +
Sbjct: 262 KGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFG 321
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q A++ ++F QM ++ ++ N T +L + LG+ IH +K E +
Sbjct: 322 QINDLAKSFELFCQM-QAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM 380
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V +IDMY K G ++ AR+ +KEK+V SWT+MIAGY H ++AL F +M K
Sbjct: 381 YVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC 440
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ P+ I S +S C+ +++G ++ + V + +V+L R G+++E
Sbjct: 441 GIWPDNIGLASAISGCAGINAMRQGLQ-IHARIYVSGYSGDVSIWNALVNLYARCGRIRE 499
Query: 446 AYDLIEGMKVKADFVVWGSLL 466
A+ E ++ K D + W L+
Sbjct: 500 AFSSFEEIEHK-DEITWNGLV 519
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 221/439 (50%), Gaps = 31/439 (7%)
Query: 76 FPCAIKSCSAL-HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
F CA+++C + H +A G + V + LID+YSK G + AR++F+E+
Sbjct: 44 FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
R + VSW +ML+GY QN EAL L+++ + V ++SV
Sbjct: 104 SAR--DNVSWVAMLSGYAQNGLGEEALGLYRQM------------HRAGVVPTPYVLSSV 149
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
LS+C++ + H K GF SE+ VGN +I Y R G ++ +VF M +D
Sbjct: 150 LSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDT 209
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
VT+N++I+ +AQ G AL++F++M + + + + VT+S++L A A LG L+ G +H
Sbjct: 210 VTFNTLISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
+ K + I+ S++D+Y KCG V+ A FN NV W M+ +G +
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----Y 430
+ +LF +M AG+RPN T+ +L C+ + L H +++ G E
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREID-----LGEQIHSLSVKTGFESDMYVS 383
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--L 488
G ++D+ + G L++A ++E +K K D V W S++ H+ A K++ + +
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEK-DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 489 EPNNCGYHVLLSNIYANAG 507
P+N G L S I AG
Sbjct: 443 WPDNIG---LASAISGCAG 458
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/574 (38%), Positives = 349/574 (60%), Gaps = 20/574 (3%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN D+ NV WN ++ + D ++ F M+ + P + T+PC +++C+
Sbjct: 301 IFNS-SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ G+Q H + GF D++VS LIDMYSK G L AR++ + + ++ ++VSWTSM
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK--DVVSWTSM 417
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GYVQ++ ++AL FKE +CG ++ D++ +AS +S C+ +N +
Sbjct: 418 IAGYVQHECCKDALAAFKEM----QKCG--------IWPDNIGLASAISGCA--GINAMR 463
Query: 208 EG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+G H + G+ +V + N L++ YAR G + + F+ + KD +TWN +++ +A
Sbjct: 464 QGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFA 523
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q+GL EAL VF +M +S VK N T + L A A+L ++ GK IH +VIK
Sbjct: 524 QSGLHEEALKVFMRMDQS-GVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFET 582
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VG ++I +Y KCG + A+ F++M E+N SW +I H R EALDLF +M K
Sbjct: 583 EVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKE 642
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G++PN +TF+ VL+ACSH GLV+EG + +M E+ I P +HY C++D+ GRAG+L
Sbjct: 643 GIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDR 702
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A IE M + AD +VW +LL AC++HKN+++GE AAK L ELEP++ +VLLSN YA
Sbjct: 703 AKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAV 762
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
+W + ++ R +M++R + K PG S +E++ VHAF VGD+ HP E+IY +L +N +
Sbjct: 763 TEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDR 822
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
+ +VGY + + HD +QE ++ T +HSEKLA
Sbjct: 823 VAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLA 856
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 226/441 (51%), Gaps = 22/441 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F + ++NV SW ++++ A+ G EAL + M + + PT + SC+
Sbjct: 99 VFEELSARDNV-SWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAE 157
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H Q + GF ++FV +A+I +Y +CG A ++F ++P R+ V++ ++
Sbjct: 158 LFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPH--RDTVTFNTL 215
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G+ Q + AL +F EE + G S D V I+S+L+AC+ ++ +
Sbjct: 216 ISGHAQCGHGEHALEIF-----EEMQFSGLSP-------DCVTISSLLAACA--SLGDLQ 261
Query: 208 EGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+G H ++ K G S+ + +L+D Y + G V+ + +F+ + V WN ++ +
Sbjct: 262 KGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFG 321
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q A++ ++F QM ++ ++ N T +L + LG+ IH +K E +
Sbjct: 322 QINDLAKSFELFCQM-QAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM 380
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V +IDMY K G ++ AR+ +KEK+V SWT+MIAGY H ++AL F +M K
Sbjct: 381 YVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC 440
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ P+ I S +S C+ +++G ++ + V + +V+L R G+++E
Sbjct: 441 GIWPDNIGLASAISGCAGINAMRQGLQ-IHARIYVSGYSGDVSIWNALVNLYARCGRIRE 499
Query: 446 AYDLIEGMKVKADFVVWGSLL 466
A+ E ++ K D + W L+
Sbjct: 500 AFSSFEEIEHK-DEITWNGLV 519
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 221/439 (50%), Gaps = 31/439 (7%)
Query: 76 FPCAIKSCSAL-HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
F CA+++C + H +A G + V + LID+YSK G + AR++F+E+
Sbjct: 44 FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
R + VSW +ML+GY QN EAL L+++ + V ++SV
Sbjct: 104 SAR--DNVSWVAMLSGYAQNGLGEEALGLYRQM------------HRAGVVPTPYVLSSV 149
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
LS+C++ + H K GF SE+ VGN +I Y R G ++ +VF M +D
Sbjct: 150 LSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDT 209
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
VT+N++I+ +AQ G AL++F++M + + + + VT+S++L A A LG L+ G +H
Sbjct: 210 VTFNTLISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
+ K + I+ S++D+Y KCG V+ A FN NV W M+ +G +
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----Y 430
+ +LF +M AG+RPN T+ +L C+ + L H +++ G E
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREID-----LGEQIHSLSVKTGFESDMYVS 383
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--L 488
G ++D+ + G L++A ++E +K K D V W S++ H+ A K++ + +
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEK-DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 489 EPNNCGYHVLLSNIYANAG 507
P+N G L S I AG
Sbjct: 443 WPDNIG---LASAISGCAG 458
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/621 (38%), Positives = 355/621 (57%), Gaps = 68/621 (10%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL--SLTPTRSTFPCAIKSCSALHDLHS 91
D+ VF +N ++ L +AL F+SMR + P T+P A+KSC+A L
Sbjct: 82 DRTTVF-FNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVL 140
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+Q H G +VFV+ + I MY++CG DA ++F+E+ + R++VSW +M++G+
Sbjct: 141 GRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEM--QYRDVVSWNAMISGF 198
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
A+ +F+E L +C D+ +AS+L + + V +
Sbjct: 199 AHAGLFGRAMDVFRE--LVALQCPKP---------DAGTMASILPSMGKARVEDIA---- 243
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+ + VFD M K ++WN+++A+Y N +
Sbjct: 244 -----------------------------LLKGVFDEMRFKGLISWNAMLAVYTNNEMHV 274
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA+++F +M K ++ +AVTL+ VL + + L LGK IH+ + + + S+++ ++
Sbjct: 275 EAVELFMRMQKD-GIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENAL 333
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+DMY CG + AR F+ M ++V SWT++I+ YG H REA+DLF KM G+ P+
Sbjct: 334 MDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDS 393
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
I FV++L+ACSHAGL+ G H+ +M EF+I P +EHY CMVDLLGRAG ++EAYD I
Sbjct: 394 IAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIM 453
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M +K + VWG+LLGACRIH N+D+G +AA L L P GY+VLLSNIYA AGRW D
Sbjct: 454 VMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWAD 513
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
V RS+M+++ + K PG S EL +VH F +GD HPQ + IY+ L EL +++E+GY
Sbjct: 514 VSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGY 573
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
++ + +HDV++E+KE L +HSEKLA NLR C DCH +L
Sbjct: 574 NPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKL 633
Query: 614 ISKVVDREIVVRDSKRFHYFK 634
IS + REI+++D R HY K
Sbjct: 634 ISTIAGREIILKDVNRIHYMK 654
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 195/453 (43%), Gaps = 73/453 (16%)
Query: 69 LTPTRSTFP----------CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSA----- 113
+ P RS FP + SC A L S + AH + +F +SA
Sbjct: 1 MNPPRSLFPELPPAGHALLRLVDSCRAPAHLRSLRAAHAR-LLFLLRLPSHPASAAVRVK 59
Query: 114 LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
LI Y+ C L AR + D P R V + +L G R+ALLLF +
Sbjct: 60 LIQAYAACAALPAARAVLDASPDR--TTVFFNVLLRGLTAASLHRDALLLFASMRPQGHA 117
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLID 231
C F D L +C+ +G+ G H + G D V V ++ I
Sbjct: 118 C----------FPDHYTYPLALKSCA--ATDGLVLGRQIHSSTARLGLDGNVFVAHSAIS 165
Query: 232 AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
YAR G D + ++F+ M +D V+WN++I+ +A GL A+DVF ++V K +A
Sbjct: 166 MYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAG 225
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
T++++L + +GK + + L + F++M
Sbjct: 226 TMASILPS--------MGK-------------------------ARVEDIALLKGVFDEM 252
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
+ K + SW AM+A Y + EA++LF +M K G+ P+ +T +VL +C + G
Sbjct: 253 RFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGK 312
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
++ + + + ++D+ G LKEA D+ + M + D V W S++ A
Sbjct: 313 R-IHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTR-DVVSWTSIISAYGR 370
Query: 472 H----KNVDLGEIAAKKLFELEPNNCGYHVLLS 500
H + +DL E + LEP++ + +L+
Sbjct: 371 HGHGREAIDLFEKMCGQ--GLEPDSIAFVAILA 401
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/633 (36%), Positives = 366/633 (57%), Gaps = 38/633 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + ++ SWNS++A + G ++ L+ + + ++ TF A+ +CS L
Sbjct: 1109 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES 1168
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K H + GFH + V +AL+ MY K G + +A+K+ +PQ R V+W +++ G+
Sbjct: 1169 KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDR--VTWNALIGGHA 1226
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR---VTVNGVTEG 209
+N+ EA+ +K L+ E + + + + SVL ACS + +G+
Sbjct: 1227 ENEEPNEAVKAYK--LIREK----------GIPANYITMVSVLGACSAPDDLLKHGMPIH 1274
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
AH ++ GF+S+ V N+LI YA+ G ++ S +FDG+ K +TWN+++A A +G
Sbjct: 1275 AH--IVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGC 1332
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EAL +F +M ++ V + + S L A A+L VL G+ +H VIK+ E + V
Sbjct: 1333 GEEALKIFGEM-RNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTN 1391
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+ +DMY KCG++ K Q ++ SW +I+ + H ++A + F++M+K G +P
Sbjct: 1392 AAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKP 1451
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+++TFVS+LSAC+H GLV EG + ++M EF + PG+EH C++DLLGR+G+L A
Sbjct: 1452 DHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGF 1511
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I+ M V + + W SLL ACRIH N++L A+ L EL+P++ +VL SN+ A +G+W
Sbjct: 1512 IKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKW 1571
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
EDVE R M + + K P S V+L+ KVH+F +G+K HPQ +I L EL +E
Sbjct: 1572 EDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEA 1631
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GYV D + +HD+D+E+KE L HSE+LA NLRVCGDCH+V
Sbjct: 1632 GYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVY 1691
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +S +V R+IV+RD RFH+F G CSCGDYW
Sbjct: 1692 KFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 175/507 (34%), Positives = 287/507 (56%), Gaps = 16/507 (3%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +V SW ++++ ++ G +A FS MR + + T+ A+++C++L L G
Sbjct: 91 MPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMG 150
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q F ++FV SAL+D +SKCG++ DA LF + +R ++VSW +M+ GY
Sbjct: 151 IQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMER--DVVSWNAMIGGYA 208
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
A ++ +F+ L GG + D + SVL A + + HG
Sbjct: 209 VQGFADDSFCMFRSMLR-----GG-------LVPDCYTLGSVLRASAEGGGLIIANQIHG 256
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL-AA 271
+ + G+ S V LI+AYA+ G + ++ + GM++KD + ++I YA G+ +
Sbjct: 257 IITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSV 316
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+ALD+F +M ++ + V L ++L A+L LG IH +K V +G ++
Sbjct: 317 DALDLFKEM-NQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNAL 375
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
IDMY K G+++ A++AF++M+EKNV SWT++I+GY H A+ L+ KM G +PN
Sbjct: 376 IDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPND 435
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+TF+S+L ACSH GL EG N M +++NI+P EHY CMVDL R G L+EAY+L+
Sbjct: 436 VTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLC 495
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
+ +K + +WG++LGA I+ + LG+ AA LF ++P N +V+L++IY+ AG W+D
Sbjct: 496 KIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDD 555
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGK 538
+ R LM+ R K G+S + K
Sbjct: 556 AWKIRKLMEERSTKKNAGYSFFQATKK 582
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 191/379 (50%), Gaps = 16/379 (4%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N LF + D +NV SW S++ + G+ E L + MR+ ++ ++TF SC
Sbjct: 899 NAQKLFEEMPD-HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC 957
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
L D G Q +GF V V+++LI M+S + +A +FD + + +I+S
Sbjct: 958 GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNEC--DIIS 1015
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W +M++ Y + RE+L F +E +S ++S+LS CS V
Sbjct: 1016 WNAMISAYAHHGLCRESLRCFHWMRHLHNE------------TNSTTLSSLLSVCSSVDN 1063
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
G HG V+K G DS V + NTL+ Y+ G + + VF M E+D ++WNS++A
Sbjct: 1064 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 1123
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y Q+G + L + ++++ V N VT ++ L A ++ L K +H +I +
Sbjct: 1124 YVQDGKCLDGLKILAELLQMGKVM-NHVTFASALAACSNPECLIESKIVHALIIVAGFHD 1182
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+IVG +++ MY K G + A+K M + + +W A+I G+ + EA+ + +
Sbjct: 1183 FLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIR 1242
Query: 384 KAGVRPNYITFVSVLSACS 402
+ G+ NYIT VSVL ACS
Sbjct: 1243 EKGIPANYITMVSVLGACS 1261
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 196/403 (48%), Gaps = 31/403 (7%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
FP +K S + +GK H + + +F ++ LI+MYSK G + AR +FDE+
Sbjct: 749 FP--LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEM- 805
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
R RN SW++ML+GYV+ EA+ LF + E G +AS++
Sbjct: 806 -RHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNG------------FMVASLI 852
Query: 196 SACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+ACSR EG HGFV+K G +V VG L+ Y G V ++K+F+ M + +
Sbjct: 853 TACSRSGYM-ADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHN 911
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V+W S++ Y+ +G E L+V+ +M + V N T + V + L LG +
Sbjct: 912 VVSWTSLMVGYSDSGNPGEVLNVYQRM-RQEGVSGNQNTFATVTSSCGLLEDQVLGYQVL 970
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+I+ E+SV V S+I M+ V+ A F+ M E ++ SW AMI+ Y H R
Sbjct: 971 GHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCR 1030
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC- 432
E+L F+ M N T S+LS CS + W + H ++ G++ C
Sbjct: 1031 ESLRCFHWMRHLHNETNSTTLSSLLSVCS----SVDNLKWGRGI-HGLVVKLGLDSNVCI 1085
Query: 433 ---MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++ L AG+ ++A + + M + D + W S++ AC +
Sbjct: 1086 CNTLLTLYSEAGRSEDAELVFQAM-TERDLISWNSMM-ACYVQ 1126
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 214/451 (47%), Gaps = 31/451 (6%)
Query: 59 RAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH---QQAFIFGFHRDVFVSSALI 115
R +++ LS PTR +K D + KQ H GF D+ +++ LI
Sbjct: 13 RLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLI 72
Query: 116 DMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG 175
Y K G++ AR +FD +P+ R++VSWT+M++GY QN +A +LF + CG
Sbjct: 73 IFYVKVGDVIAARNVFDGMPE--RSVVSWTAMVSGYSQNGRFEKAFVLFSDM----RHCG 126
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
V + S L AC+ + + G + K F + V + L+D +++
Sbjct: 127 --------VKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSK 178
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
G ++ + +F M+E+D V+WN++I YA G A ++ +F M++ V + TL +
Sbjct: 179 CGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVP-DCYTLGS 237
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
VL A A G L + IH + ++ IV +I+ Y K G + A+ M +K+
Sbjct: 238 VLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKD 297
Query: 356 VRSWTAMIAGYGMH-CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
+ S TA+I GY + +ALDLF +M + + + + S+L+ C++ L
Sbjct: 298 LFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFA-----L 352
Query: 415 NTMGHEFNI--EPG--VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
T H F + +P V ++D+ ++G++++A + M+ K + + W SL+
Sbjct: 353 GTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEK-NVISWTSLISGYA 411
Query: 471 IHKNVDLGEIAAKKLFE--LEPNNCGYHVLL 499
H + KK+ +PN+ + LL
Sbjct: 412 KHGYGHMAVSLYKKMESKGFKPNDVTFLSLL 442
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 145/286 (50%), Gaps = 8/286 (2%)
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
A+ L S +T + H F I + + NTLI+ Y++ G+++ +R VFD M
Sbjct: 746 AVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEM 805
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR-L 308
++ +W+++++ Y + GL EA+ +F QM V+ N +++++ A + G +
Sbjct: 806 RHRNEASWSTMLSGYVRVGLYEEAVGLFCQMW-GLGVEPNGFMVASLITACSRSGYMADE 864
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
G +H V+K + V VGT+++ Y G V A+K F +M + NV SWT+++ GY
Sbjct: 865 GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSD 924
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH--EFNIEPG 426
E L+++ +M + GV N TF +V S+C GL+++ +GH ++ E
Sbjct: 925 SGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDS 981
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
V ++ + ++EA + + M + D + W +++ A H
Sbjct: 982 VSVANSLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISAYAHH 1026
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/635 (37%), Positives = 356/635 (56%), Gaps = 34/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN V K+ V W ++++ + A R FS MR P +K+ L
Sbjct: 219 VFNGIVRKDAVV-WTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLP 277
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ GK H A + V AL+DMY+KCG++ DAR F+ IP +++ + M
Sbjct: 278 SVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYD--DVILLSFM 335
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ Y Q++ +A LF + +V + +++SVL AC+ +
Sbjct: 336 ISRYAQSNQNEQAFELFLRLM------------RSSVLPNEYSLSSVLQACTNMVQLDFG 383
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H IK G +S++ VGN L+D YA+ +D S K+F + + + V+WN+I+ ++Q+
Sbjct: 384 KQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQS 443
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL EAL VF +M ++ + C VT S+VL A A +R IH + K ++
Sbjct: 444 GLGEEALSVFCEM-QAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVI 502
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G S+ID Y KCG + A K F + E+++ SW A+I+GY +H +A +AL+LF +M K+ V
Sbjct: 503 GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNV 562
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
N ITFV++LS CS GLV G ++M + I+P +EHY C+V LLGRAG+L +A
Sbjct: 563 ESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDAL 622
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I + +VW +LL +C IHKNV LG +A+K+ E+EP + +VLLSN+YA AG
Sbjct: 623 QFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAG 682
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+ V R M+N + K PG S VE++G++HAF VG +HP I LE LN+K
Sbjct: 683 SLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTS 742
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GY+ D+ V+HDVD+E+K L +HSE+LA NLR C DCHT
Sbjct: 743 REGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHT 802
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ISK+V REI+VRD RFH+F+DG CSCGDYW
Sbjct: 803 AFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 200/413 (48%), Gaps = 27/413 (6%)
Query: 61 FSSMRKLSLTPTRSTFPCA--IKSCSALHDLHSGKQAHQQAFIFGF--HRDVFVSSALID 116
+S+ L P +F CA ++ C A D G+ H G D+F ++ L++
Sbjct: 45 LTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLN 104
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY K G L+ AR+LFD +P+R N+VS+ +++ + Q + A LF+ E E
Sbjct: 105 MYGKLGPLASARRLFDRMPER--NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE--- 159
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
V+ + ++L + G+ G H K G D VG+ LIDAY+
Sbjct: 160 ---------VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLC 210
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
V + VF+G++ KDAV W ++++ Y++N A VF +M + + K N L++V
Sbjct: 211 SLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKM-RVSGCKPNPFALTSV 269
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A L + LGK IH IK + VG +++DMY KCG + AR AF + +V
Sbjct: 270 LKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDV 329
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN- 415
+ MI+ Y + +A +LF +++++ V PN + SVL AC++ + G N
Sbjct: 330 ILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNH 389
Query: 416 --TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+GHE ++ G ++D + + + + ++ A+ V W +++
Sbjct: 390 AIKIGHESDLFVG----NALMDFYAKCNDMDSSLKIFSSLR-DANEVSWNTIV 437
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/583 (41%), Positives = 341/583 (58%), Gaps = 34/583 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++SC + L GKQ H + G ++ +++ L++ YS C L +A LFD+IP+
Sbjct: 65 LESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKG-- 122
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+ W ++ Y N A+ L+ + L E G +N + VL ACS
Sbjct: 123 NLFLWNVLIRAYAWNGPHETAISLYHQML----EYGLKPDN--------FTLPFVLKACS 170
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
++ G H VI+ G++ +V VG L+D YA+ G V +R VFD ++++DAV WNS
Sbjct: 171 ALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNS 230
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
++A YAQNG E+L + +M + V+ TL V+ + A + L G+ IH +
Sbjct: 231 MLAAYAQNGHPDESLSLCCEMA-AKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRH 289
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
+ + V T++IDMY KCG V +A F +++EK V SW A+I GY MH A EALDLF
Sbjct: 290 GFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLF 349
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
+M+K +P++ITFV L+ACS L+ EG N M + I P VEHY CMVDLLG
Sbjct: 350 ERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGH 408
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
G+L EAYDLI M V D VWG+LL +C+ H NV+L E+A +KL ELEP++ G +V+L
Sbjct: 409 CGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVIL 468
Query: 500 SNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYL 559
+N+YA +G+WE V R R LM ++ + K S +E++ KV+AFL GD HP IY L
Sbjct: 469 ANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAEL 528
Query: 560 EELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NL 601
+ L ++E GYV D SV HDV+++EK + HSE+LA NL
Sbjct: 529 KRLEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNL 588
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
R+C DCH I+ ISK+ +REI VRD R+H+F+ GLCSCGDYW
Sbjct: 589 RICEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 172/329 (52%), Gaps = 18/329 (5%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N LF+K + K N+F WN +I A G A+ + M + L P T P +K+C
Sbjct: 111 NAHHLFDK-IPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKAC 169
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
SAL + G+ H++ G+ RDVFV +AL+DMY+KCG + DAR +FD+I R+ V
Sbjct: 170 SALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVD--RDAVL 227
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W SML Y QN + E+L L E + V + +V+S+ + +
Sbjct: 228 WNSMLAAYAQNGHPDESLSLCCEM------------AAKGVRPTEATLVTVISSSADIAC 275
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
HGF + GF V LID YA+ G V V+ +F+ + EK V+WN+II
Sbjct: 276 LPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITG 335
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLE 322
YA +GLA EALD+F++M+K + + + +T L A + +L G+ +++ +++ +
Sbjct: 336 YAMHGLAVEALDLFERMMK--EAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRIN 393
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
+V T ++D+ CGQ+D A QM
Sbjct: 394 PTVEHYTCMVDLLGHCGQLDEAYDLIRQM 422
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 158/333 (47%), Gaps = 18/333 (5%)
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
AS+L +C + H + + G + + L++ Y+ + + +FD + +
Sbjct: 62 ASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPK 121
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
+ WN +I YA NG A+ ++ QM++ +K + TL VL A + L + G+
Sbjct: 122 GNLFLWNVLIRAYAWNGPHETAISLYHQMLE-YGLKPDNFTLPFVLKACSALSTIGEGRV 180
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
IH++VI+ E V VG +++DMY KCG V AR F+++ +++ W +M+A Y +
Sbjct: 181 IHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGH 240
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLS-----ACSHAGLVQEGWHWLNTMGHEFNIEPG 426
E+L L +M GVRP T V+V+S AC G G+ W H F
Sbjct: 241 PDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGW----RHGFQYNDK 296
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK-NVDLGEIAAKKL 485
V+ ++D+ + G +K A L E ++ K V W +++ +H V+ ++ + +
Sbjct: 297 VK--TALIDMYAKCGSVKVACVLFERLREK-RVVSWNAIITGYAMHGLAVEALDLFERMM 353
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSL 518
E +P+ H+ A R ++ R+L
Sbjct: 354 KEAQPD----HITFVGALAACSRGRLLDEGRAL 382
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/634 (36%), Positives = 368/634 (58%), Gaps = 34/634 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ +D + +WNS+I L + +EA++ F MR+ L P+ T A+ SC++L +
Sbjct: 448 RLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWIS 507
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G+Q H + G DV VS+AL+ +Y +CG + + +K F + + VSW S++
Sbjct: 508 VGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDY--DHVSWNSLIGA 565
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
D+ L + FL+ G N V ++L+A S ++++ + +
Sbjct: 566 LA--DSEPSMLEAVESFLVMMR--AGWDPNR-------VTFITILAAVSSLSLHELGKQI 614
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK-DAVTWNSIIAIYAQNGL 269
H V+KR ++ + N L+ Y + G + +F M ++ D V+WNS+I+ Y N L
Sbjct: 615 HALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNEL 674
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
+A+D+ M++ + + T + VL A A + L G +H ++ LE +++G+
Sbjct: 675 LPKAMDMVWFMMQKGQ-RLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGS 733
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+++DMY KCG++D A + F M +N+ SW +MI+GY H ++LDLF +M G P
Sbjct: 734 ALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLP 793
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+++TFV VLSACSHAGLV EG+ ++M + + P +EH+ CMVDLLGR G+L + D
Sbjct: 794 DHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDF 853
Query: 450 IEGMKVKADFVVWGSLLGA-CRIH-KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ M VK + ++W ++LGA CR + +N LG AA+ L E+EP N ++LLSN+YA+ G
Sbjct: 854 LNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGG 913
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+W+DV +TR M+ + K G S V ++ VH F+ GDK HP+ + IYE L+ELN K++
Sbjct: 914 KWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMR 973
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------NLRVCGDCHTV 610
GY+ + ++D++ E KE L HSEK+A NLRVCGDCH+
Sbjct: 974 LAGYIPETRFALYDLEGESKEELLSYHSEKIAVAFVLTRPSKMPIRILKNLRVCGDCHSA 1033
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ IS++V+R+IV+RDS RFH+F++G CSCGD+W
Sbjct: 1034 FKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 208/421 (49%), Gaps = 42/421 (9%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
++ H Q F GF D+F+ + LI++Y++ G+L RK+FDE+P +RN+VSW+ +++GY
Sbjct: 92 AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMP--LRNLVSWSCLISGY 149
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA- 210
+N EA LF++ + SD + A SV+ AC G+ G
Sbjct: 150 TRNRMPNEACELFRKMV------------SDGFMPNHYAFGSVIRACQECGEYGLKFGMQ 197
Query: 211 -HGFVIKRGFDSEVGVGNTLIDAYARG-GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
HG + K + ++V N LI Y G VD +R+ FD + ++ V+ NS+I++Y Q G
Sbjct: 198 IHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRG 257
Query: 269 LAAEALDVFDQMVKST---DVKCNAVTLSAVLLA---IAHLGVLRLGKCIHDQVIKMDLE 322
A A D+F M K +K N T +++ A +A+ G++ L + + +V K
Sbjct: 258 DAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLL-TRVEKSGFL 316
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ VG++++ + K G + A+ F +M +NV S +I G R EA++LF +M
Sbjct: 317 HDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM 376
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC-----MVDLL 437
K V N +++ +L+A +++ G + + H F I G+ + ++++
Sbjct: 377 -KDSVELNPNSYMIILTAFPEFHVLENGKRKGSEV-HAFLIRSGLLNAQIAIGNGLINMY 434
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF------ELEPN 491
+ G + +A + M K D V W S++ +K + A K F EL P+
Sbjct: 435 AKCGAINDACVVFRLMDNK-DSVTWNSMITGLDQNKQF----LEAVKTFQEMRRTELYPS 489
Query: 492 N 492
N
Sbjct: 490 N 490
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 202/442 (45%), Gaps = 24/442 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL--HDLHSGKQ 94
N+ SW+ +I+ R EA F M P F I++C + L G Q
Sbjct: 138 NLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQ 197
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKC-GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H + DV S+ LI MY G + AR+ FD I R N+VS SM++ Y Q
Sbjct: 198 IHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPR--NLVSLNSMISVYCQ 255
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT--EGAH 211
+A A +F + E G D + + S++SA + +G+ E
Sbjct: 256 RGDAVSAFDIFSTM---QKEVMG-----DGLKPNEYTFGSLISATCSLANSGLVLLEQLL 307
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
V K GF ++ VG+ L+ +A+ G + ++ +F M ++ V+ N +I +
Sbjct: 308 TRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGE 367
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL----RLGKCIHDQVIKMDLEESVI- 326
EA+++F +M S ++ N+ + +L A VL R G +H +I+ L + I
Sbjct: 368 EAVELFMEMKDSVELNPNSYMI--ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIA 425
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
+G +I+MY KCG ++ A F M K+ +W +MI G + + EA+ F +M +
Sbjct: 426 IGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTE 485
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+ P+ T +S LS+C+ G + G L+ G + ++ V ++ L G G +KE
Sbjct: 486 LYPSNFTMISALSSCASLGWISVG-EQLHCEGLKLGLDLDVSVSNALLALYGECGYVKEC 544
Query: 447 YDLIEGMKVKADFVVWGSLLGA 468
M + D V W SL+GA
Sbjct: 545 QKAFSLM-LDYDHVSWNSLIGA 565
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 149/308 (48%), Gaps = 21/308 (6%)
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
E H + K GF +++ + NTLI+ YAR G + RKVFD M ++ V+W+ +I+ Y +
Sbjct: 92 AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV--LRLGKCIHDQVIKMDLEES 324
N + EA ++F +MV S N +V+ A G L+ G IH + K
Sbjct: 152 NRMPNEACELFRKMV-SDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVND 210
Query: 325 VIVGTSIIDMYCKC-GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
V +I MY G VD AR+AF+ + +N+ S +MI+ Y A A D+F M
Sbjct: 211 VTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQ 270
Query: 384 KA----GVRPNYITFVSVLSA-CSHAG----LVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
K G++PN TF S++SA CS A L+++ + G ++ G +V
Sbjct: 271 KEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVG----SALV 326
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI--AAKKLFELEPNN 492
+AG + A ++ + M + + G ++G R + + E+ K EL PN+
Sbjct: 327 SGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNS 386
Query: 493 CGYHVLLS 500
Y ++L+
Sbjct: 387 --YMIILT 392
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 20/240 (8%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+F++ D+ + SWNS+I+ +A+ M + TF + +C+ +
Sbjct: 648 NIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATV 707
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G + H + D+ + SAL+DMY+KCG + A + F+ +P RN+ SW S
Sbjct: 708 ATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPA--RNLYSWNS 765
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M++GY ++ + ++L LF + L+ D V VLSACS + V
Sbjct: 766 MISGYARHGHGTKSLDLFAQMKLQ------------GPLPDHVTFVGVLSACSHAGL--V 811
Query: 207 TEGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
EG F G + + ++D R G ++ + M ++ + + W +++
Sbjct: 812 NEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLG 871
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 29 FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD 88
F + + N++SWNS+I+ AR G ++L F+ M+ P TF + +CS
Sbjct: 751 FFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGL 810
Query: 89 LHSG-KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ G + I+G + S ++D+ + GEL+ +++P + N++ W ++
Sbjct: 811 VNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVK-PNVLIWRTV 869
Query: 148 LTGYVQNDNAREAL 161
L + + AL
Sbjct: 870 LGACCRANGRNTAL 883
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/595 (39%), Positives = 353/595 (59%), Gaps = 57/595 (9%)
Query: 77 PCAIKSCSALHDL------------HSG--KQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
P I CS HDL +G Q + ++ VF D+YSK
Sbjct: 81 PREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQVNTYKKVFDEGKTSDVYSKKE 140
Query: 123 E----LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
+ L RK+F+ +P+R +IVSW ++++G QN +AL++ +E G A
Sbjct: 141 KESYYLGSLRKVFEMMPKR--DIVSWNTVISGNAQNGMHEDALMMVREM-------GNA- 190
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
++ DS ++SVL + + HG+ I+ G+D++V +G++LID YA+
Sbjct: 191 ----DLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTR 246
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
VD S +VF + + D ++WNSIIA QNG+ E L F QM+ + +K N V+ S+++
Sbjct: 247 VDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAK-IKPNHVSFSSIMP 305
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
A AHL L LGK +H +I+ + +V + ++++DMY KCG + AR F++M+ ++ S
Sbjct: 306 ACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVS 365
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
WTAMI GY +H A +A+ LF +M GV+PNY+ F++VL+ACSHAGLV E W + N+M
Sbjct: 366 WTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMT 425
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
++ I PG+EHY + DLLGR G+L+EAY+ I M ++ VW +LL ACR+HKN++L
Sbjct: 426 QDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELA 485
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
E +KKLF ++P N G +VLLSNIY+ AGRW+D + R M+++ + K P S +E++ K
Sbjct: 486 EKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNK 545
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
VHAF+ GDK HP +++I E L+ L +++ GYV D T V+HDV++E+K L HSE+L
Sbjct: 546 VHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERL 605
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
A NLRVC DCHT + ISK+V REIV F++F D
Sbjct: 606 AITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIV------FYFFLD 654
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 193/392 (49%), Gaps = 35/392 (8%)
Query: 2 KLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
K+ S V S +K S + + K ++ SWN+VI+ A+ G +AL
Sbjct: 125 KVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMV 184
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
M L P T + + +L GK+ H A G+ DVF+ S+LIDMY+KC
Sbjct: 185 REMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKC 244
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
+ D+ ++F +PQ + +SW S++ G VQN E L F++ L+ +
Sbjct: 245 TRVDDSCRVFYMLPQ--HDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAK---------- 292
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
+ + V+ +S++ AC+ +T + + HG++I+ FD V + + L+D YA+ G++
Sbjct: 293 --IKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRT 350
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R +FD M D V+W ++I YA +G A +A+ +F +M + VK N V AVL A +
Sbjct: 351 ARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM-EVEGVKPNYVAFMAVLTACS 409
Query: 302 HLGVLRLGKCIHDQVIK----MDLEESVIVG----TSIIDMYCKCGQVDLARKAFNQMK- 352
H G++ D+ K M + +I G ++ D+ + G+++ A + + M
Sbjct: 410 HAGLV-------DEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHI 462
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
E W+ ++A CR + ++L K+ K
Sbjct: 463 EPTGSVWSTLLAA----CRVHKNIELAEKVSK 490
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 237/514 (46%), Gaps = 77/514 (14%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA--- 127
P + FP +KSC+ + DL G+ H G D++ +AL++MYSK L +
Sbjct: 8 PDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQ 67
Query: 128 ----RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
K+ IP+ R I G N + L + G +N D
Sbjct: 68 RFCDSKMLGGIPEP-REI--------GKCSNSHDLPCEL--------DERVAGIDQNGD- 109
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR----GGHV 239
L+ S + T K+ FD G T D Y++ ++
Sbjct: 110 -----------LNQMSNILYQVNT-------YKKVFDE----GKT-SDVYSKKEKESYYL 146
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
RKVF+ M ++D V+WN++I+ AQNG+ +AL + +M + D++ ++ TLS+VL
Sbjct: 147 GSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREM-GNADLRPDSFTLSSVLPI 205
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A L GK IH I+ + V +G+S+IDMY KC +VD + + F + + + SW
Sbjct: 206 FAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISW 265
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
++IAG + E L F +M+ A ++PN+++F S++ AC+H + G L+
Sbjct: 266 NSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQ-LHGYII 324
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
+ V +VD+ + G ++ A + + M++ D V W +++ +H +
Sbjct: 325 RSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMEL-YDMVSWTAMIMGYALHGHA-YDA 382
Query: 480 IAAKKLFELE---PNNCGYHVLLSNIYANAGRWEDVERT-RSLMKNRRLAKTPGF----S 531
I+ K E+E PN + +L+ ++AG ++ + S+ ++ R+ PG +
Sbjct: 383 ISLFKRMEVEGVKPNYVAFMAVLTAC-SHAGLVDEAWKYFNSMTQDYRI--IPGLEHYAA 439
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
+ +L G+V E+ YE++ +++++
Sbjct: 440 VADLLGRVGRL----------EEAYEFISDMHIE 463
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 246/626 (39%), Positives = 361/626 (57%), Gaps = 42/626 (6%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTR---STFPCAIKSCSALHDLHSGKQAHQQ 98
N+ + +R G SV++ + ++P+ + A++ C + GK H +
Sbjct: 5 NNFLIQFSRRGFSVQSAKLTQEFVG-HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCE 63
Query: 99 AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR 158
G D+F + L++MY K L DA KLFDE+P+R N +S+ +++ GY ++
Sbjct: 64 ILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPER--NTISFVTLIQGYAESVRFL 121
Query: 159 EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIK 216
EA+ LF E V + ASVL AC+ T+ G+ G H VIK
Sbjct: 122 EAIELFVRLHRE-------------VLPNQFTFASVLQACA--TMEGLNLGNQIHCHVIK 166
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G S+V V N L+D YA+ G ++ S ++F ++ VTWN++I + Q G +AL +
Sbjct: 167 IGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRL 226
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F M++ V+ VT S+ L A A L L G IH +K ++ ++V ++IDMY
Sbjct: 227 FLNMLEYR-VQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYA 285
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG + AR F+ M +++ SW AMI+GY MH REAL +F KM + V+P+ +TFV
Sbjct: 286 KCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVG 345
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VLSAC++AGL+ +G + +M + IEP +EHY CMV LLGR G L +A LI+ + +
Sbjct: 346 VLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQ 405
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
+VW +LLGAC IH +++LG I+A+++ E+EP + HVLLSN+YA A RW++V R
Sbjct: 406 PSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVR 465
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
MK + + K PG S +E +G VH+F VGD HP+ I LE L++K ++ GY+ +
Sbjct: 466 KNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYN 525
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V+ DV+ EEKE L +HSE+LA NLR+C DCH I+ ISKVV
Sbjct: 526 VVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVV 585
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
REIVVRD RFH+F++GLCSCGDYW
Sbjct: 586 QREIVVRDINRFHHFQEGLCSCGDYW 611
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 185/346 (53%), Gaps = 19/346 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ LF++ ++N + S+ ++I A +EA+ F + + + P + TF +++C+
Sbjct: 93 SKLFDEMPERNTI-SFVTLIQGYAESVRFLEAIELFVRLHR-EVLPNQFTFASVLQACAT 150
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ L+ G Q H G H DVFVS+AL+D+Y+KCG + ++ +LF E P RN V+W
Sbjct: 151 MEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPH--RNDVTWN 208
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+++ G+VQ + +AL LF L V V +S L AC+ +
Sbjct: 209 TVIVGHVQLGDGEKALRLFLNML------------EYRVQATEVTYSSALRACASLAALE 256
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
H +K FD ++ V N LID YA+ G + +R VFD M ++D V+WN++I+ Y+
Sbjct: 257 PGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYS 316
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEES 324
+GL EAL +FD+M + T+VK + +T VL A A+ G+L G+ +I+ +E
Sbjct: 317 MHGLGREALRIFDKM-QETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPC 375
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+ T ++ + + G +D A K +++ + +V W A++ +H
Sbjct: 376 IEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIH 421
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 127/241 (52%), Gaps = 17/241 (7%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N LF + +N+V +WN+VI + GD +ALR F +M + + T T+ A+++C
Sbjct: 191 NSMELFAESPHRNDV-TWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRAC 249
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
++L L G Q H F +D+ V++ALIDMY+KCG + DAR +FD + + ++ VS
Sbjct: 250 ASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNK--QDEVS 307
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W +M++GY + REAL +F + ++E+E V D + VLSAC+ +
Sbjct: 308 WNAMISGYSMHGLGREALRIFDK--MQETE----------VKPDKLTFVGVLSACANAGL 355
Query: 204 NGVTEGAHGFVIK-RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
+ +I+ G + + ++ RGGH+D + K+ D + + + W +++
Sbjct: 356 LDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL 415
Query: 262 A 262
Sbjct: 416 G 416
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/658 (35%), Positives = 369/658 (56%), Gaps = 59/658 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL---------- 86
+V SW ++I+ + G EA +AF MR + + S AL
Sbjct: 119 DVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGS 178
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ L G H +GF + ++++ MYS C ++ A ++F+ IP R++VSW S
Sbjct: 179 NCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNS 238
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+++G+ N A AL F++ + SE + V + V + ++L +C+ +
Sbjct: 239 LISGFTLNGEAERALRTFEDMV---------SEGTSAVEPNRVTVIALLKSCAELGCVET 289
Query: 207 TEGAHGFVIKRG----FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ H ++ R +V V L+D +AR G++ ++R++FDG+ K+ V W+++IA
Sbjct: 290 SSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIA 349
Query: 263 IYAQNGLAAEALDVFDQMVK-----STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
Y Q EAL +F QM+ +VK NAVTL +V+ A + LG R IH +
Sbjct: 350 GYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAV 409
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE--KNVRSWTAMIAGYGMHCRAREA 375
L++ + +++IDM KCG ++ R+ F++M E + V SW++MI G+H + A
Sbjct: 410 ATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRA 469
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
L+LF +M G PN IT++SVLSACSHAGLV++G N+M ++ + P +HY C+VD
Sbjct: 470 LELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVD 529
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY 495
LLGRAG L EA+++I M +KAD +WGSLL AC +H N LGEI KK+ L+ N+ G+
Sbjct: 530 LLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGH 589
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
HVLL+N+Y +AGRW+DV R R ++ L K PG S +E+ +V++F+ D+ HP+ E I
Sbjct: 590 HVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMI 649
Query: 556 YEYLEELNVKLQEVG-YVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------------- 599
Y+ L+ L+ ++++ YVT+ + D D + + HSE+LA
Sbjct: 650 YKELDGLDERVRKAAKYVTETGLNVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHSTCS 709
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH +L+SKV+DRE++VRD+ RFH+F+DG CSCGDYW
Sbjct: 710 CSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/499 (31%), Positives = 256/499 (51%), Gaps = 49/499 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + F WNS+IA A AL F+ M+ ++ TFP +K+C+AL L
Sbjct: 13 ISHKDTFHWNSLIAKNATQNPQT-ALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H G D F ++AL+D Y KCG A ++FDE+P+ ++VSWT++++ Y
Sbjct: 72 LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131
Query: 153 QNDNAREALLLFKEFL----LEESECGGASENSDNVFVDSVAIASVLSACS-RVTVNGVT 207
N EA F + SEC G VD V++ +++SAC+ N +
Sbjct: 132 SNGCVDEAFKAFGRMRWMRGWDGSECCG---------VDVVSLGALVSACAVGCGSNCLR 182
Query: 208 EGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI--EKDAVTWNSIIAI 263
G+ HG V+K GF +GN+++ Y+ V + +VF+G+ ++D V+WNS+I+
Sbjct: 183 RGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISG 242
Query: 264 YAQNGLAAEALDVFDQMVK--STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV----I 317
+ NG A AL F+ MV ++ V+ N VT+ A+L + A LG + +H+ +
Sbjct: 243 FTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHS 302
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ + + V+V T+++DM+ +CG + LAR+ F+ ++ KNV W+AMIAGY EAL
Sbjct: 303 SLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALR 362
Query: 378 LFYKMIKAG------VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH-- 429
LF +M+ G V+PN +T VSV++ACS G + +M H++ + G++
Sbjct: 363 LFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSA-----SMIHKYAVATGLDQDA 417
Query: 430 --YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV-WGSLLGACRIHKNVDLGEIAAKKLF 486
++D+ + G ++ + M VV W S++GA IH G+ A +
Sbjct: 418 RIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGE---GKRALELFS 474
Query: 487 EL-----EPNNCGYHVLLS 500
E+ EPN Y +LS
Sbjct: 475 EMRTGGYEPNEITYISVLS 493
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/685 (35%), Positives = 378/685 (55%), Gaps = 73/685 (10%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
V S + N + + +L F + + + N +SW ++IA A+ G +A++ + + + +
Sbjct: 398 VGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQT 457
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
+ T++ A + Q + F + +V +A+I Y++ G L +A+
Sbjct: 458 VA-TKTAMMTAYAQVGRI-------QKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAK 509
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
LF ++P ++N SW +M+ G+VQN+ +REAL E L+E G +S
Sbjct: 510 DLFQKMP--VKNSASWAAMIAGFVQNEESREAL----ELLIELHRSGSVPSDS------- 556
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV--------- 239
+ S LSAC+ + + H IK G V N LI YA+ G+V
Sbjct: 557 -SFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRT 615
Query: 240 ----------------------DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
D +R VF+ M ++D V+W +II+ Y Q G ALD+F
Sbjct: 616 IRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLF 675
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
M+ + +K N +T++++L A +LG ++LG+ H + K+ + + VG S+I MY K
Sbjct: 676 LDML-ARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFK 734
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
CG D F +M E ++ +W A++ G + +EA+ +F +M G+ P+ ++F+ V
Sbjct: 735 CGYED-GFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGV 793
Query: 398 LSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
L ACSHAGLV EGW N+M ++ I P V HY CMVDLLGRAG L EA LIE M VK
Sbjct: 794 LCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKP 853
Query: 458 DFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRS 517
D V+W +LLGACRIH+NV+LG+ A++LF++ +VLLSN++A+ G W+ V R
Sbjct: 854 DSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRK 913
Query: 518 LMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTS 577
LMK++ L K PG S ++++ K+H F+ GD+ H Q E+IY L+E + GY+ D
Sbjct: 914 LMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNF 973
Query: 578 VIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVD 619
V+HDV++E+K+ L HSEKLA NLR+CGDCHT ++ +SKV
Sbjct: 974 VLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTL 1033
Query: 620 REIVVRDSKRFHYFKDGLCSCGDYW 644
R+I++RD RFH+F+DG CSCGDYW
Sbjct: 1034 RKIIIRDGNRFHHFRDGSCSCGDYW 1058
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 235/502 (46%), Gaps = 63/502 (12%)
Query: 30 NKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC-----AIKSCS 84
NK + ++F N+ I +L R G EA R F+ M + + S +
Sbjct: 163 NKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEAR 222
Query: 85 ALHDLHSGKQAHQQAFIFGFH---------RDVFVS---------SALIDMYSKCGELSD 126
L D GK + + R+VF S +A+I Y + G+L +
Sbjct: 223 LLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKN 282
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES-----ECGGASENS 181
ARKLFDE+P+ +N+ SW S++TGY EA LF + S G S
Sbjct: 283 ARKLFDEMPE--KNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHIS 340
Query: 182 D-----NVFV---------DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN 227
D +VFV D VLSA + + + IK G++ +V VG+
Sbjct: 341 DYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGS 400
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
+++AY R G +D++ F+ M E++ +W ++IA +AQ G +A+ +++++ + T
Sbjct: 401 AILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQT--- 457
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
T +A++ A A +G ++ + I D++ L +V+ +II Y + G + A+
Sbjct: 458 --VATKTAMMTAYAQVGRIQKARLIFDEI----LNPNVVAWNAIIAGYTQNGMLKEAKDL 511
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F +M KN SW AMIAG+ + +REAL+L ++ ++G P+ +F S LSAC++ G V
Sbjct: 512 FQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDV 571
Query: 408 QEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWG 463
+ G + H I+ G + ++ + + G +++ + ++VK D V W
Sbjct: 572 EIG-----RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVK-DTVSWN 625
Query: 464 SLLGACRIHKNVDLGEIAAKKL 485
SL+ + +D + +K+
Sbjct: 626 SLISGLSENYMLDDARVVFEKM 647
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 249/664 (37%), Positives = 367/664 (55%), Gaps = 68/664 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHS 91
+ + NV SW S+I AR + +A+ F M R +TP T C I +C+ L DL +
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 92 GKQAHQQAFI--FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
G++ + AFI G + + SAL+DMY KC + A++LFDE N+ +M +
Sbjct: 255 GEKVY--AFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGAS--NLDLCNAMAS 310
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
YV+ REAL +F L+ +S V D +++ S +S+CS++ +
Sbjct: 311 NYVRQGLTREALGVFN--LMMDS----------GVRPDRISMLSAISSCSQLRNILWGKS 358
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG- 268
HG+V++ GF+S + N LID Y + D + ++FD M K VTWNSI+A Y +NG
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 269 ------------------------------LAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
L EA++VF M V + VT+ ++
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
A HLG L L K I+ + K ++ V +GT+++DM+ +CG + A FN + ++V +
Sbjct: 479 ACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 538
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
WTA I M A A++LF MI+ G++P+ + FV L+ACSH GLVQ+G +M
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSML 598
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
+ P HYGCMVDLLGRAG L+EA LIE M ++ + V+W SLL ACR+ NV++
Sbjct: 599 KLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
AA+K+ L P G +VLLSN+YA+AGRW D+ + R MK + L K PG S +++RGK
Sbjct: 659 AYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGK 718
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
H F GD+ HP+ I L+E++ + +G+V D+++V+ DVD++EK L HSEKL
Sbjct: 719 THEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKL 778
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVC DCH+ + SKV +REI++RD+ RFHY + G CSC
Sbjct: 779 AMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSC 838
Query: 641 GDYW 644
GD+W
Sbjct: 839 GDFW 842
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 241/496 (48%), Gaps = 61/496 (12%)
Query: 7 SSVSSVVSNVDKHSTNTNLTTLFNKYVDKNN-----VFSWNSVIADLARGGDSVEALRAF 61
S+++ +V+ + T +L+ F K V +N+ F +NS+I A G EA+ F
Sbjct: 65 STITKLVARSCELGTRESLS--FAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF 122
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
M ++P + TFP + +C+ +G Q H G+ +D+FV ++L+ Y++C
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 182
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
GEL ARK+FDE+ + RN+VSWTSM+ GY + D A++A+ LF + +E
Sbjct: 183 GELDSARKVFDEMSE--RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE--------- 231
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
V +SV + V+SAC+++ E + F+ G + + + L+D Y + +DV
Sbjct: 232 --VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
++++FD + N++ + Y + GL EAL VF+ M+ S V+ + +++ + + + +
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS-GVRPDRISMLSAISSCS 348
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC----------------------- 338
L + GK H V++ E + ++IDMY KC
Sbjct: 349 QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS 408
Query: 339 --------GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM-IKAGVRP 389
G+VD A + F M EKN+ SW +I+G EA+++F M + GV
Sbjct: 409 IVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA 468
Query: 390 NYITFVSVLSACSHAG---LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+ +T +S+ SAC H G L + ++++ G + ++ G +VD+ R G + A
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTT----LVDMFSRCGDPESA 524
Query: 447 YDLIEGMKVKADFVVW 462
+ + + D W
Sbjct: 525 MSIFNSLTNR-DVSAW 539
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 212/427 (49%), Gaps = 36/427 (8%)
Query: 72 TRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG---ELSDAR 128
T++T P ++K+C + +L K H+ G DV + L+ + G LS A+
Sbjct: 32 TKAT-PSSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAK 87
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
++F E + + S++ GY + EA+LLF + + + D
Sbjct: 88 EVF-ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMM------------NSGISPDK 134
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
LSAC++ G HG ++K G+ ++ V N+L+ YA G +D +RKVFD
Sbjct: 135 YTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDE 194
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M E++ V+W S+I YA+ A +A+D+F +MV+ +V N+VT+ V+ A A L L
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
G+ ++ + +E + ++ ++++DMY KC +D+A++ F++ N+ AM + Y
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
REAL +F M+ +GVRP+ I+ +S +S+CS + G H + + G E
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG-----KSCHGYVLRNGFE 369
Query: 429 HY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI-AAK 483
+ ++D+ + + A+ + + M K V W S++ V+ GE+ AA
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVAG-----YVENGEVDAAW 423
Query: 484 KLFELEP 490
+ FE P
Sbjct: 424 ETFETMP 430
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 178/374 (47%), Gaps = 32/374 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++Y +N+ N++ ++ R G + EAL F+ M + P R + AI SCS L
Sbjct: 293 LFDEY-GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLR 351
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ GK H GF + +ALIDMY KC A ++FD + + +V+W S+
Sbjct: 352 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK--TVVTWNSI 409
Query: 148 LTGYVQNDNAREALLLFKEF-------------------LLEES-ECGGASENSDNVFVD 187
+ GYV+N A F+ L EE+ E + ++ + V D
Sbjct: 410 VAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNAD 469
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
V + S+ SAC + + + + ++ K G +V +G TL+D ++R G + + +F+
Sbjct: 470 GVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ +D W + I A G A A+++FD M++ +K + V L A +H G+++
Sbjct: 530 SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ-GLKPDGVAFVGALTACSHGGLVQ 588
Query: 308 LGKCIHDQVIKMD--LEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIA 364
GK I ++K+ E V G ++D+ + G ++ A + M E N W +++A
Sbjct: 589 QGKEIFYSMLKLHGVSPEDVHYGC-MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLA 647
Query: 365 GYGMHCRAREALDL 378
CR + +++
Sbjct: 648 A----CRVQGNVEM 657
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/630 (38%), Positives = 362/630 (57%), Gaps = 37/630 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS--CSALHDLHSGKQ 94
V S+ + I+ A+ + AL AF++M ++ L P TFP A K+ C+ G Q
Sbjct: 75 TVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQ 134
Query: 95 AHQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H A FG+ D FVS A +DMY K G L AR+LF+E+P R N+++W +++T V
Sbjct: 135 IHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNR--NVIAWNAVMTNAVI 192
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+ E FK + E GG + V++ + +AC+ + E HGF
Sbjct: 193 DGRPLET---FKAYF-GLREAGGMP--------NVVSVCAFFNACAGAMFLSLGEQFHGF 240
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V+ GFD +V V N ++D Y + +R VFDGM +++V+W S+I YAQ+G +A
Sbjct: 241 VVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDA 300
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L V+ ++T + +S+VL A L L G+ +H ++ ++ ++ V ++++D
Sbjct: 301 LAVY-MGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVD 359
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-VRPNYI 392
MY KCG V+ A + F M E+N+ +W AMI GY A+ AL +F MI++G PN+I
Sbjct: 360 MYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHI 419
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
T V+V++ACS GL ++G+ +TM F +EP EHY C+VDLLGRAG + AY++I+
Sbjct: 420 TLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQR 479
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M ++ VWG+LLGAC++H +LG IA++KLFEL+P + G HVLLSN+ A+AGRW +
Sbjct: 480 MPMRPSISVWGALLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEA 539
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R MKN + K PG S + + VH F D +H ++ +I L +L ++Q GY+
Sbjct: 540 TDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYM 599
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D ++DV++EEKE + HSEKLA NLR+C DCH + +
Sbjct: 600 PDTQYSLYDVEEEEKETEVFQHSEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFV 659
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S +V REI+VRD+ RFHYFK CSC DYW
Sbjct: 660 SGIVGREIIVRDNNRFHYFKQFECSCKDYW 689
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 6/164 (3%)
Query: 307 RLGKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
RLG+ H + +++ + ++++Y K A A V S+TA I+G
Sbjct: 26 RLGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISG 85
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVL--SACSHAGLVQEGWHWLNTMGHEFNI 423
H R AL F M++ G+RPN TF S +AC+ G ++ + F
Sbjct: 86 AAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQ-IHALALRFGY 144
Query: 424 EPGVEHYGC-MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
PG C +D+ + G L A L E M + + + W +++
Sbjct: 145 LPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNR-NVIAWNAVM 187
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/653 (36%), Positives = 372/653 (56%), Gaps = 49/653 (7%)
Query: 16 VDKHSTNTNLTT---LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPT 72
+D + N +L + +F+ ++K V W +I+ +G + EA+ F + P
Sbjct: 195 IDMLARNGDLASARKVFDGLIEKT-VVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPD 253
Query: 73 RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFD 132
R T I +C+ L + G Q H A GF D VS L+DMY+K + A +
Sbjct: 254 RYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK-SNIEQAMDYAN 312
Query: 133 EIPQRIR--NIVSWTSMLTGYVQND-NAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
++ +R+R +++SWT++++GYVQ+ + ++LF E L ++++ + +
Sbjct: 313 KVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEML------------NESIKPNHI 360
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
+S+L AC+ ++ + H VIK + VGN L+ YA G ++ +R+VF+ +
Sbjct: 361 TYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQL 420
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
E+ S+I+ + A D + D+ ++ T ++++ A A +G+L G
Sbjct: 421 YER------SMISCITEGRDAP-----LDHRIGRMDMGISSSTFASLISAAASVGMLTKG 469
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
+ +H +K V S++ MY +CG ++ A ++FN++K++NV SWT+MI+G H
Sbjct: 470 QQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKH 529
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
A AL LF+ MI GV+PN +T+++VLSACSH GLV+EG + +M + + P +EH
Sbjct: 530 GYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEH 589
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
Y CMVDLL R+G +KEA + I M +KAD +VW +LLGACR H N+++GEIAAK + ELE
Sbjct: 590 YACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELE 649
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
P + +VLLSN+YA+AG W++V R RS M++ L K G S +E+ H F GD H
Sbjct: 650 PRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSH 709
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
P+ + IY L+ L +++ +GYV D + V+HD+ E KE L HSEK+A
Sbjct: 710 PRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSA 769
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH+ I+ +SK REI++RDS RFH KDG CSCG+YW
Sbjct: 770 PKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 181/324 (55%), Gaps = 23/324 (7%)
Query: 88 DLHSGKQAHQQAFIFG--FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
DL G+ H++ + G RD V+++L+ +YS+CG ++ AR +FD + + +R+IVSWT
Sbjct: 63 DLRLGRALHRR-LLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGM-RGLRDIVSWT 120
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M + +N RE+LLL E L E G + ++ + +V AC +
Sbjct: 121 AMASCLARNGAERESLLLIGEML----ESG--------LLPNAYTLCAVAHACFPHELYC 168
Query: 206 VTEGAHGFVI-KRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ G ++ K G + +++ VG+ LID AR G + +RKVFDG+IEK V W +I+
Sbjct: 169 LVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISR 228
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y Q A EA+++F ++ + + T+S+++ A LG +RLG +H ++M
Sbjct: 229 YVQGECAEEAVEIFLDFLED-GFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFAS 287
Query: 324 SVIVGTSIIDMYCKCG---QVDLARKAFNQMKEKNVRSWTAMIAGYGMH-CRAREALDLF 379
V ++DMY K +D A K F +M++ +V SWTA+I+GY + + + LF
Sbjct: 288 DACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLF 347
Query: 380 YKMIKAGVRPNYITFVSVLSACSH 403
+M+ ++PN+IT+ S+L AC++
Sbjct: 348 GEMLNESIKPNHITYSSILKACAN 371
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 234/490 (47%), Gaps = 53/490 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ ++ SW ++ + LAR G E+L M + L P T CA+ H
Sbjct: 106 VFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLESGLLPNAYTL-CAVAHACFPH 164
Query: 88 DLH------SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI 141
+L+ H+ + D+ V SALIDM ++ G+L+ ARK+FD + ++ +
Sbjct: 165 ELYCLVGGVVLGLVHKMGL---WGTDIAVGSALIDMLARNGDLASARKVFDGLIEK--TV 219
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
V WT +++ YVQ + A EA+ +F +FL D D ++S++SAC+ +
Sbjct: 220 VVWTLLISRYVQGECAEEAVEIFLDFL------------EDGFEPDRYTMSSMISACTEL 267
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG---HVDVSRKVFDGMIEKDAVTWN 258
+ H ++ GF S+ V L+D YA+ +D + KVF+ M + D ++W
Sbjct: 268 GSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWT 327
Query: 259 SIIAIYAQNGLAAEALDV-FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
++I+ Y Q+G+ + V F +M+ + +K N +T S++L A A++ G+ +H VI
Sbjct: 328 ALISGYVQSGVQENKVMVLFGEMLNES-IKPNHITYSSILKACANISDHDSGRQVHAHVI 386
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA-L 376
K + + VG +++ MY + G ++ AR+ FNQ+ E+++ S R+A L
Sbjct: 387 KSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCIT---------EGRDAPL 437
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGC 432
D + G+ + TF S++SA + G++ +G H ++ G
Sbjct: 438 DHRIGRMDMGISSS--TFASLISAAASVGMLTKGQQL-----HAMTLKAGFGSDRFVSNS 490
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD--LGEIAAKKLFELEP 490
+V + R G L++A +K + + + W S++ H + L L ++P
Sbjct: 491 LVSMYSRCGYLEDACRSFNELKDR-NVISWTSMISGLAKHGYAERALSLFHDMILTGVKP 549
Query: 491 NNCGYHVLLS 500
N+ Y +LS
Sbjct: 550 NDVTYIAVLS 559
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 4/166 (2%)
Query: 304 GVLRLGKCIHDQVIKMDL-EESVIVGTSIIDMYCKCGQVDLARKAFNQMKE-KNVRSWTA 361
G LRLG+ +H ++++ DL + +V S++ +Y +CG V AR F+ M+ +++ SWTA
Sbjct: 62 GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
M + + RE+L L +M+++G+ PN T +V AC L + + H+
Sbjct: 122 MASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKM 181
Query: 422 NI-EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ + ++D+L R G L A + +G+ ++ VVW L+
Sbjct: 182 GLWGTDIAVGSALIDMLARNGDLASARKVFDGL-IEKTVVVWTLLI 226
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/594 (37%), Positives = 348/594 (58%), Gaps = 34/594 (5%)
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
L PT + I +C+ +L ++ H F D F+ ++LI +Y KCG + +A
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
K+FD++ R +++VSWTS++ GY QND EA+ L L + G
Sbjct: 107 KVFDKM--RKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNG------------ 152
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
AS+L A +G+ H +K + +V VG+ L+D YAR G +D++ VFD
Sbjct: 153 FTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDK 212
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
+ K+ V+WN++I+ +A+ G AL VF +M ++ + T S++ +A +G L
Sbjct: 213 LDSKNGVSWNALISGFARKGDGETALMVFAEMQRN-GFEATHFTYSSIFSGLAGIGALEQ 271
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK +H ++K + + VG +++DMY K G + ARK F ++ K++ +W +M+ +
Sbjct: 272 GKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQ 331
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
+ +EA+ F +M K+G+ N ITF+ +L+ACSH GLV+EG H+ + M E+N+EP +E
Sbjct: 332 YGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIE 390
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HY +VDLLGRAG L A I M ++ VWG+LL ACR+HKN +G+ AA +F+L
Sbjct: 391 HYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQL 450
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
+P++ G VLL NIYA+ G W+ R R +MK + K P S VE+ VH F+ D
Sbjct: 451 DPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDT 510
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
HP+ E+IY+ +E+++K+++ GYV DM V+ VD++E+E L+ HSEK+A
Sbjct: 511 HPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMP 570
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
N+R+CGDCH+ + ISKV +REIVVRD+ RFH+F +G CSCGDYW
Sbjct: 571 AGATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 176/347 (50%), Gaps = 17/347 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K + K ++ SW S+IA A+ EA+ M K P TF +K+ A
Sbjct: 108 VFDK-MRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G Q H A +H DV+V SAL+DMY++CG++ A +FD++ +N VSW ++
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDS--KNGVSWNAL 224
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G+ + + AL++F E + +S+ S + +
Sbjct: 225 ISGFARKGDGETALMVFAEM------------QRNGFEATHFTYSSIFSGLAGIGALEQG 272
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H ++K VGNT++D YA+ G + +RKVF+ ++ KD VTWNS++ +AQ
Sbjct: 273 KWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQY 332
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL EA+ F++M KS + N +T +L A +H G+++ GK D + + +LE +
Sbjct: 333 GLGKEAVSHFEEMRKS-GIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEH 391
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAR 373
+++D+ + G ++ A +M E W A++A MH A+
Sbjct: 392 YVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK 438
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 20/240 (8%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
T +F+K KN V SWN++I+ AR GD AL F+ M++ T T+ +
Sbjct: 207 TAVFDKLDSKNGV-SWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAG 265
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ L GK H FV + ++DMY+K G + DARK+F+ + +++V+W
Sbjct: 266 IGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLN--KDLVTWN 323
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
SMLT + Q +EA+ F+E ++++ + +L+ACS +
Sbjct: 324 SMLTAFAQYGLGKEAVSHFEEM------------RKSGIYLNQITFLCILTACSHGGL-- 369
Query: 206 VTEGAHGFVIKRGFDSEVGVGN--TLIDAYARGGHVDVSRK-VFDGMIEKDAVTWNSIIA 262
V EG H F + + ++ E + + T++D R G ++ + +F +E A W +++A
Sbjct: 370 VKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLA 429
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 248/716 (34%), Positives = 365/716 (50%), Gaps = 94/716 (13%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S++S K + +F + +++ V SW ++ L R G EA++ F M L
Sbjct: 100 NSLLSLYAKSGRLADARAVFAEMPERDPV-SWTVMVVGLNRVGRFGEAIKMFLDMVTDGL 158
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
+PT+ T + SC+A G++ H G V V++++++MY KCG+ AR
Sbjct: 159 SPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARA 218
Query: 130 LFDEIPQRI-----------------------------RNIVSWTSMLTGYVQNDNAREA 160
+F+ +P+R R IVSW +++ GY QN +A
Sbjct: 219 VFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKA 278
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
L F L + + D I SVLSAC+ + + + + H ++++
Sbjct: 279 LWFFSRML-----------SYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMP 327
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKV---------------------------------FD 247
V N LI YA+ G V+ +R V FD
Sbjct: 328 YIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFD 387
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
M +D V W ++I Y QNG EA+++F M++S + N+ T++AVL A L L
Sbjct: 388 VMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGP-EPNSYTVAAVLSVCASLACLE 446
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGY 366
GK IH + I+ E+S V SI+ MY + G + AR+ F+++ K +WT+MI
Sbjct: 447 YGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVAL 506
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
H +A+ LF +M++ GV+P+ ITFV VLSAC+H G V EG + + + I P
Sbjct: 507 AQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPE 566
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
+ HY CMVDLL RAG EA + I+ M V+ D + WGSLL ACR+HKN DL E+AA+KL
Sbjct: 567 MSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLL 626
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
++P N G + LSN+Y+ GRW D + K++ + K GFS + +VH F D
Sbjct: 627 SIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADD 686
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
HPQ + +Y ++ +++ G+V D+ SV+HDVD E KE L HSEKLA
Sbjct: 687 VLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVS 746
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT I+ ISKV DREI++RD+ RFH+FKDG CSC DYW
Sbjct: 747 TPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 209/451 (46%), Gaps = 83/451 (18%)
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
I R+VF ++L+ +Y+K G L+DAR +F E+P+R + VSWT M+ G + EA
Sbjct: 89 IPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPER--DPVSWTVMVVGLNRVGRFGEA 146
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
+ +F + + +D + + +VLS+C+ GV H FV+K G
Sbjct: 147 IKMFLDMV------------TDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLS 194
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA-------------------------- 254
S V V N++++ Y + G + +R VF+ M E+
Sbjct: 195 SCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENM 254
Query: 255 -----VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
V+WN++IA Y QNGL A+AL F +M+ + + + T+++VL A A+LG++ +G
Sbjct: 255 PDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIG 314
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV-------------DL------------- 343
K +H +++ + V ++I MY K G V DL
Sbjct: 315 KQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYV 374
Query: 344 -------ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
AR+ F+ M ++V +WTAMI GY + EA++LF MI++G PN T +
Sbjct: 375 KLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAA 434
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VLS C+ ++ G ++ E +V + R+G L A + + + +
Sbjct: 435 VLSVCASLACLEYGKQ-IHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWR 493
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
+ V W S++ A H LGE A LFE
Sbjct: 494 KETVTWTSMIVALAQH---GLGEDAV-GLFE 520
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 202/437 (46%), Gaps = 61/437 (13%)
Query: 7 SSVSSVVSNVDKHSTNTNLT-TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR 65
SS +++VS +D H +L +LF D+ + SWN+VIA + G + +AL FS M
Sbjct: 229 SSWNAMVS-LDAHLGRMDLALSLFENMPDRT-IVSWNAVIAGYNQNGLNAKALWFFSRML 286
Query: 66 KLS-LTPTRSTFPCAIKSCSALHDLHSGKQAH---------------------------- 96
S + P T + +C+ L + GKQ H
Sbjct: 287 SYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSV 346
Query: 97 -------QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
QQA + +V +AL++ Y K G++ AR++FD + R++V+WT+M+
Sbjct: 347 ENARGVMQQAVMADL--NVISFTALLEGYVKLGDMKHAREMFDVMSN--RDVVAWTAMIV 402
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
GY QN + EA+ LF+ + E +S +A+VLS C+ + +
Sbjct: 403 GYEQNGHNDEAMELFRLMIRSGPE------------PNSYTVAAVLSVCASLACLEYGKQ 450
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNG 268
H I+ + V N+++ YAR G + +R+VFD + K+ VTW S+I AQ+G
Sbjct: 451 IHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHG 510
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESVIV 327
L +A+ +F++M++ VK + +T VL A H+G + GK Q+ K + +
Sbjct: 511 LGEDAVGLFEEMLR-VGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSH 569
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKM--IK 384
++D+ + G A++ QM E + +W ++++ +H A A K+ I
Sbjct: 570 YACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSID 629
Query: 385 AGVRPNYITFVSVLSAC 401
G Y +V SAC
Sbjct: 630 PGNSGAYSALSNVYSAC 646
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 5 KSSSVS-SVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
+SSSVS S+V+ + + +F++ + +W S+I LA+ G +A+ F
Sbjct: 462 QSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEE 521
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQ-AFIFGFHRDVFVSSALIDMYSKCG 122
M ++ + P R TF + +C+ + + GK+ QQ G ++ + ++D+ ++ G
Sbjct: 522 MLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAG 581
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
S+A++ ++P + ++W S+L+ + NA A L ++ L + GA
Sbjct: 582 LFSEAQEFIQQMPVE-PDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYS--- 637
Query: 183 NVFVDSVAIASVLSACSR 200
A+++V SAC R
Sbjct: 638 -------ALSNVYSACGR 648
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/637 (36%), Positives = 351/637 (55%), Gaps = 34/637 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ +F K D ++V SWN++I+ G A+ M+ L P T +K+CS
Sbjct: 257 SVIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSG 315
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
G+Q H D ++ L+DMY+K L DARK+FD + R +++
Sbjct: 316 AGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR--DLILCN 373
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
++++G EAL LF E + + V+ +A+VL + + +
Sbjct: 374 ALISGCSHGGRHDEALSLFYEL------------RKEGLGVNRTTLAAVLKSTASLEAAS 421
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
T H +K GF + V N LID+Y + + + +VF+ D + S+I +
Sbjct: 422 TTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALS 481
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q A+ +F +M++ ++ + LS++L A A L GK +H +IK
Sbjct: 482 QCDHGEGAIKLFMEMLRK-GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDA 540
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
G +++ Y KCG ++ A AF+ + E+ V SW+AMI G H + AL+LF +M+
Sbjct: 541 FAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE 600
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ PN+IT SVL AC+HAGLV E + N+M F I+ EHY CM+DLLGRAGKL +
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A +L+ M +A+ +WG+LLGA R+HK+ +LG++AA+KLF LEP G HVLL+N YA+
Sbjct: 661 AMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYAS 720
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
AG W +V + R LMK+ + K P S +E++ KVH F+VGDK HP ++IY L EL
Sbjct: 721 AGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDL 780
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
+ + G+V ++ +HD+D+ EKE+ L HSE+LA NLR+C DC
Sbjct: 781 MSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDC 840
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H + ISK+V REI++RD RFH+F+DG CSCGDYW
Sbjct: 841 HVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 194/376 (51%), Gaps = 24/376 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ D +V SW+S++ + G A++AF MR + P +K +
Sbjct: 59 VFDEIPDPCHV-SWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK---CVP 114
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G Q H A GF DVFV++AL+ MY G + DAR++F+E RN VSW +
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSE-RNAVSWNGL 173
Query: 148 LTGYVQNDNAREALLLFKEFL---LEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++ YV+ND +A+ +F E + ++ +E G + V++AC+
Sbjct: 174 MSAYVKNDQCGDAIQVFGEMVWSGIQPTEFG---------------FSCVVNACTGSRNI 218
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
H V++ G+D +V N L+D Y + G VD++ +F+ M + D V+WN++I+
Sbjct: 219 EAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGC 278
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
NG A+++ QM K + + N TLS++L A + G LG+ IH +IK + +
Sbjct: 279 VLNGHDHRAIELLLQM-KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSD 337
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+G ++DMY K +D ARK F+ M +++ A+I+G R EAL LFY++ K
Sbjct: 338 DYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRK 397
Query: 385 AGVRPNYITFVSVLSA 400
G+ N T +VL +
Sbjct: 398 EGLGVNRTTLAAVLKS 413
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 193/383 (50%), Gaps = 15/383 (3%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ + N SWN +++ + +A++ F M + PT F C + +C+
Sbjct: 157 VFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSR 216
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ +G+Q H G+ +DVF ++AL+DMY K G + A +F+++P ++VSW ++
Sbjct: 217 NIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPD--SDVVSWNAL 274
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G V N + A+ E LL+ G NVF ++S+L ACS +
Sbjct: 275 ISGCVLNGHDHRAI----ELLLQMKYSGLVP----NVFT----LSSILKACSGAGAFDLG 322
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
HGF+IK DS+ +G L+D YA+ +D +RKVFD M +D + N++I+ +
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHG 382
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EAL +F ++ K + N TL+AVL + A L + +H +K+ V
Sbjct: 383 GRHDEALSLFYELRKE-GLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHV 441
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+ID Y KC + A + F + ++ + T+MI A+ LF +M++ G+
Sbjct: 442 VNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGL 501
Query: 388 RPNYITFVSVLSACSHAGLVQEG 410
P+ S+L+AC+ ++G
Sbjct: 502 EPDPFVLSSLLNACASLSAYEQG 524
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 174/361 (48%), Gaps = 29/361 (8%)
Query: 114 LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
LI YSKC AR++FDEIP VSW+S++T Y N R A+ F E
Sbjct: 43 LISFYSKCRRPCCARRVFDEIPDPCH--VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY 233
C N F V + V A V H + GF S+V V N L+ Y
Sbjct: 101 C--------NEFALPVVLKCVPDARLGAQV-------HAMAMATGFGSDVFVANALVAMY 145
Query: 234 ARGGHVDVSRKVF-DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
G +D +R+VF + E++AV+WN +++ Y +N +A+ VF +MV S ++
Sbjct: 146 GGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS-GIQPTEFG 204
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
S V+ A + G+ +H V++M ++ V +++DMY K G+VD+A F +M
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP 264
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
+ +V SW A+I+G ++ A++L +M +G+ PN T S+L ACS AG
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD---- 320
Query: 413 WLNTMGHEFNIEPGV---EHYGC-MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
L H F I+ ++ G +VD+ + L +A + + M D ++ +L+
Sbjct: 321 -LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISG 378
Query: 469 C 469
C
Sbjct: 379 C 379
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/521 (41%), Positives = 316/521 (60%), Gaps = 31/521 (5%)
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
VSW S++ G V+ +AL F++ S ++ +D + SVL++ + +
Sbjct: 7 VSWNSLILGCVREGFEEDALSFFQKM------------RSRDMKIDEYTLPSVLNSFASM 54
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSII 261
V H +IK GF++ V N LID YA+ G +D + VF M++KD V+W S++
Sbjct: 55 KVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLV 114
Query: 262 AIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL 321
Y+ NG EA+ +F +M + + V + + +++VL A A L V+ G+ IH ++K L
Sbjct: 115 TGYSHNGSYEEAIKLFCKM-RISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGL 173
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK 381
E S+ V S++ MY KCG + A +AF+ M ++V SWTA+I GY + R + +L + +
Sbjct: 174 ESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQ 233
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
MI G +P+YITF+ +L ACSH GL+ G + M + I+PG EHY CM+DLLGR+G
Sbjct: 234 MIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSG 293
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSN 501
KL EA L+ M V D VVW +LL ACR+HK ++LGE+AAK LFELEP N +V+LSN
Sbjct: 294 KLAEAKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSN 353
Query: 502 IYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEE 561
+Y+ AG+WED R R LM++R + K PG+S +E KV F+ D+ HP +IY ++E
Sbjct: 354 MYSAAGKWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDE 413
Query: 562 LNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRV 603
+ + ++E GYV DM+ +HD D E KE+ L HSEKLA NLRV
Sbjct: 414 IIMLIKEAGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRV 473
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CGDCHT ++ SKV R I++RDS FH+F +G CSCGDYW
Sbjct: 474 CGDCHTAMKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 175/344 (50%), Gaps = 27/344 (7%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SWNS+I R G +AL F MR + T P + S +++ + + H
Sbjct: 8 SWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLI 67
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
GF V++ALIDMY+K G+L A +F ++ +++VSWTS++TGY N + E
Sbjct: 68 IKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVD--KDVVSWTSLVTGYSHNGSYEE 125
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+ LF + + V+ D +A+ASVLSAC+ +TV + H ++K G
Sbjct: 126 AIKLFCKMRIS------------GVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGL 173
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+S + V N+L+ YA+ G + + + FD M +D ++W ++I YAQNG +L +DQ
Sbjct: 174 ESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQ 233
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS----IIDMY 335
M+ +T K + +T +L A +H G+L G+ + MD + G +ID+
Sbjct: 234 MI-ATGTKPDYITFIGLLFACSHNGLLGSGRAYFEA---MDKVYGIKPGPEHYACMIDLL 289
Query: 336 CKCGQVDLARKAFNQM-KEKNVRSWTAMIAGYGMHCRAREALDL 378
+ G++ A+ NQM + W A++A CR + L+L
Sbjct: 290 GRSGKLAEAKGLLNQMVVAPDAVVWKALLAA----CRVHKELEL 329
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 115/214 (53%), Gaps = 3/214 (1%)
Query: 253 DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI 312
D V+WNS+I + G +AL F +M +S D+K + TL +VL + A + V++ +
Sbjct: 5 DEVSWNSLILGCVREGFEEDALSFFQKM-RSRDMKIDEYTLPSVLNSFASMKVMQNAISV 63
Query: 313 HDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
H +IK E +V ++IDMY K G++D A F++M +K+V SWT+++ GY +
Sbjct: 64 HCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSY 123
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC 432
EA+ LF KM +GV P+ I SVLSAC+ ++ G T+ +E +
Sbjct: 124 EEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKS-GLESSLSVDNS 182
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+V + + G + +A + M + D + W +L+
Sbjct: 183 LVTMYAKCGSIVDANRAFDNMPTR-DVISWTALI 215
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 27/242 (11%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K VDK+ V SW S++ + G EA++ F MR + P + + +C+ L
Sbjct: 98 VFSKMVDKD-VVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELT 156
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G+Q H G + V ++L+ MY+KCG + DA + FD +P R+++SWT++
Sbjct: 157 VMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPT--RDVISWTAL 214
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY QN + +L + + + ++ D + +L ACS NG+
Sbjct: 215 IVGYAQNGRGKHSLQFYDQMIATGTK------------PDYITFIGLLFACSH---NGLL 259
Query: 208 EGAHGFVIKRGFDSEVGVGN------TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSI 260
+ D G+ +ID R G + ++ + + M + DAV W ++
Sbjct: 260 GSGRAYF--EAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKAL 317
Query: 261 IA 262
+A
Sbjct: 318 LA 319
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/637 (36%), Positives = 351/637 (55%), Gaps = 34/637 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ +F K D ++V SWN++I+ G A+ M+ L P T +K+CS
Sbjct: 257 SVIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSG 315
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
G+Q H D ++ L+DMY+K L DARK+FD + R +++
Sbjct: 316 AGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR--DLILCN 373
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
++++G EAL LF E + + V+ +A+VL + + +
Sbjct: 374 ALISGCSHGGRHDEALSLFYEL------------RKEGLGVNRTTLAAVLKSTASLEAAS 421
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
T H +K GF + V N LID+Y + + + +VF+ D + S+I +
Sbjct: 422 TTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALS 481
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q A+ +F +M++ ++ + LS++L A A L GK +H +IK
Sbjct: 482 QCDHGEGAIKLFMEMLRK-GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDA 540
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
G +++ Y KCG ++ A AF+ + E+ V SW+AMI G H + AL+LF +M+
Sbjct: 541 FAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE 600
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ PN+IT SVL AC+HAGLV E + N+M F I+ EHY CM+DLLGRAGKL +
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A +L+ M +A+ +WG+LLGA R+HK+ +LG++AA+KLF LEP G HVLL+N YA+
Sbjct: 661 AMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYAS 720
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
AG W +V + R LMK+ + K P S +E++ KVH F+VGDK HP ++IY L EL
Sbjct: 721 AGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDL 780
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
+ + G+V ++ +HD+D+ EKE+ L HSE+LA NLR+C DC
Sbjct: 781 MSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDC 840
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H + ISK+V REI++RD RFH+F+DG CSCGDYW
Sbjct: 841 HVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 193/376 (51%), Gaps = 24/376 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
F++ D +V SW+S++ + G A++AF MR + P +K +
Sbjct: 59 FFDEIPDPCHV-SWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK---CVP 114
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G Q H A GF DVFV++AL+ MY G + DAR++F+E RN VSW +
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSE-RNAVSWNGL 173
Query: 148 LTGYVQNDNAREALLLFKEFL---LEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++ YV+ND +A+ +F E + ++ +E G + V++AC+
Sbjct: 174 MSAYVKNDQCGDAIQVFGEMVWSGIQPTEFG---------------FSCVVNACTGSRNI 218
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
H V++ G+D +V N L+D Y + G VD++ +F+ M + D V+WN++I+
Sbjct: 219 EAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGC 278
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
NG A+++ QM K + + N TLS++L A + G LG+ IH +IK + +
Sbjct: 279 VLNGHDHRAIELLLQM-KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSD 337
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+G ++DMY K +D ARK F+ M +++ A+I+G R EAL LFY++ K
Sbjct: 338 DYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRK 397
Query: 385 AGVRPNYITFVSVLSA 400
G+ N T +VL +
Sbjct: 398 EGLGVNRTTLAAVLKS 413
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 193/383 (50%), Gaps = 15/383 (3%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ + N SWN +++ + +A++ F M + PT F C + +C+
Sbjct: 157 VFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSR 216
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ +G+Q H G+ +DVF ++AL+DMY K G + A +F+++P ++VSW ++
Sbjct: 217 NIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPD--SDVVSWNAL 274
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G V N + A+ E LL+ G NVF ++S+L ACS +
Sbjct: 275 ISGCVLNGHDHRAI----ELLLQMKYSGLVP----NVFT----LSSILKACSGAGAFDLG 322
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
HGF+IK DS+ +G L+D YA+ +D +RKVFD M +D + N++I+ +
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHG 382
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EAL +F ++ K + N TL+AVL + A L + +H +K+ V
Sbjct: 383 GRHDEALSLFYELRKE-GLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHV 441
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+ID Y KC + A + F + ++ + T+MI A+ LF +M++ G+
Sbjct: 442 VNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGL 501
Query: 388 RPNYITFVSVLSACSHAGLVQEG 410
P+ S+L+AC+ ++G
Sbjct: 502 EPDPFVLSSLLNACASLSAYEQG 524
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 173/361 (47%), Gaps = 29/361 (8%)
Query: 114 LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
LI YSKC AR+ FDEIP VSW+S++T Y N R A+ F E
Sbjct: 43 LISFYSKCRRPCCARRFFDEIPDPCH--VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY 233
C N F V + V A V H + GF S+V V N L+ Y
Sbjct: 101 C--------NEFALPVVLKCVPDARLGAQV-------HAMAMATGFGSDVFVANALVAMY 145
Query: 234 ARGGHVDVSRKVF-DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
G +D +R+VF + E++AV+WN +++ Y +N +A+ VF +MV S ++
Sbjct: 146 GGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS-GIQPTEFG 204
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
S V+ A + G+ +H V++M ++ V +++DMY K G+VD+A F +M
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP 264
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
+ +V SW A+I+G ++ A++L +M +G+ PN T S+L ACS AG
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD---- 320
Query: 413 WLNTMGHEFNIEPGV---EHYGC-MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
L H F I+ ++ G +VD+ + L +A + + M D ++ +L+
Sbjct: 321 -LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISG 378
Query: 469 C 469
C
Sbjct: 379 C 379
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/635 (37%), Positives = 360/635 (56%), Gaps = 34/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ + K+ V +W ++++ + +AL FS MR P +K+ L
Sbjct: 207 VFDGIIWKDAV-TWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLS 265
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
GK H A + V AL+DMY+KCG + DAR +F+ IP +++ W+ +
Sbjct: 266 SAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHD--DVILWSFL 323
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ Y Q+ +A +F + +V + +++ VL AC+ V +
Sbjct: 324 ISRYAQSYQNEQAFEMFLRMM------------RSSVVPNEFSLSGVLQACANVAFLDLG 371
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H VIK G++SE+ VGN L+D YA+ +++ S ++F + + + V+WN+II Y Q+
Sbjct: 372 QQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQS 431
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A +AL VF +M ++ V VT S+VL A A+ ++ IH + K IV
Sbjct: 432 GFAEDALSVFQEM-RAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIV 490
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
S+ID Y KCG + A K F + + +V SW A+I+GY +H RA +AL+LF +M K+
Sbjct: 491 CNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDT 550
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+PN +TFV++LS C GLV +G N+M + I+P ++HY C+V LLGRAG+L +A
Sbjct: 551 KPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDAL 610
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I + +VW +LL +C +HKNV LG+ +A+K+ E+EP + +VLLSN+YA AG
Sbjct: 611 KFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAG 670
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+ V R M+N + K G S VE++G+VHAF VG +HP I LE LN+K
Sbjct: 671 ILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKAS 730
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV D+ V+HDVD+EEK L +HSE+LA NLR C DCHT
Sbjct: 731 REGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHT 790
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
V ++ISK+V REIVVRD RFH+F +G+CSCGDYW
Sbjct: 791 VFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 208/408 (50%), Gaps = 28/408 (6%)
Query: 71 PTRSTFPCA--IKSCSALHDLHSGKQAHQQAFIFG--FHRDVFVSSALIDMYSKCGELSD 126
P ++ CA ++ C A D +G+ H + G D F ++ L+++Y+K G L+
Sbjct: 43 PKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAA 102
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
AR+LFD +P+R N+VS+ +++ GY EA LF+ E E V
Sbjct: 103 ARRLFDGMPER--NMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHE------------V 148
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
+ + ++L + G+T H K G D VG++LIDAY+ G V +R VF
Sbjct: 149 NHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVF 208
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
DG+I KDAVTW ++++ Y++N + +AL+ F +M + K N L++VL A L
Sbjct: 209 DGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKM-RMAGAKPNPFVLTSVLKAAVCLSSA 267
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
LGK IH +K + VG +++DMY KCG ++ AR F + +V W+ +I+ Y
Sbjct: 268 VLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRY 327
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN---TMGHEFNI 423
+ +A ++F +M+++ V PN + VL AC++ + G N +G+E +
Sbjct: 328 AQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESEL 387
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL-GACR 470
G ++D+ + ++ + ++ ++ A+ V W +++ G C+
Sbjct: 388 FVG----NALMDVYAKCRNMENSLEIFRSLR-DANEVSWNTIIVGYCQ 430
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N +F D N V SWN++I + G + +AL F MR + T+ TF +++C
Sbjct: 405 NSLEIFRSLRDANEV-SWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRAC 463
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ + Q H F+ D V ++LID Y+KCG + DA K+F+ I Q ++VS
Sbjct: 464 ANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQ--CDVVS 521
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
W ++++GY + A +AL LF N + + V ++LS C
Sbjct: 522 WNAIISGYALHGRATDALELFNRM------------NKSDTKPNDVTFVALLSVC 564
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/589 (36%), Positives = 351/589 (59%), Gaps = 31/589 (5%)
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDE 133
ST+ +K C+ L GK+ H G+ D +++ LI+MY KCG +++AR +FD+
Sbjct: 25 STYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQ 84
Query: 134 IPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
I ++ +++SW ++ Y QN +EAL LFK LE V + V + +
Sbjct: 85 IQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLE------------GVIANQVTLIN 132
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+ AC+ + H + + +S+ VG +L++ + + +VD +R VFD + K+
Sbjct: 133 AIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKN 192
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
VTWN+++A+Y+QN +A+ VF + + V+ +AVT ++ A A L G+ +H
Sbjct: 193 LVTWNNMVAVYSQNWQCKKAIQVF-RFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVH 251
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
D + + V +GT+++ Y KCG++D AR F+ + +KN +W+A++A Y +
Sbjct: 252 DDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYET 311
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
EA++L+++M++ G+ N ITF+ +L ACSHAG +G + +M +F + P EHY +
Sbjct: 312 EAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNL 371
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
+DLLGR+G+L+ + DLI M + D W +LLGACR+H +VD G A+ ++EL+P +
Sbjct: 372 IDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDS 431
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
G ++LLSN+Y++ GR ++ RTR M+ R + K PG S +E++ +VH F+ K HPQ
Sbjct: 432 GPYILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLG 491
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------- 599
+I+ +E L +++E GYV D+ +V+ DV++EEKE L HSE+LA
Sbjct: 492 RIHAEIERLKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTAL 551
Query: 600 ----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH ++ ISKVV R+IVVRD+ RFH+F++G CSCGDYW
Sbjct: 552 HIVKNLRVCFDCHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 189/383 (49%), Gaps = 28/383 (7%)
Query: 27 TLFNKYVDKN-NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
++F++ +KN +V SWN +I + G EAL F +M + + T AI +C++
Sbjct: 80 SVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACAS 139
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L G+ H A D V ++L++M+ KC + AR +FD +P+ +N+V+W
Sbjct: 140 LPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPR--KNLVTWN 197
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M+ Y QN ++A+ +F+ LE V D+V +++ AC+ + +
Sbjct: 198 NMVAVYSQNWQCKKAIQVFRFMDLE------------GVQPDAVTFLTIIDACAALAAHT 245
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
H + G +V +G ++ Y + G +D +R +FD + +K+ VTW++I+A YA
Sbjct: 246 EGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYA 305
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QNG EA++++ +MV+ ++ N +T +L A +H G G D + M + V
Sbjct: 306 QNGYETEAIELYHEMVQG-GLEVNGITFLGLLFACSHAGRSMDGV---DYFVSMIRDFGV 361
Query: 326 IV----GTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHC---RAREALD 377
+ ++ID+ + GQ+ L+ N M E + +W A++ MH R +
Sbjct: 362 VPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAE 421
Query: 378 LFYKMIKAGVRPNYITFVSVLSA 400
L Y++ P YI ++ S+
Sbjct: 422 LIYELDPEDSGP-YILLSNLYSS 443
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 24/273 (8%)
Query: 2 KLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
+L + V + + N+ N + + + N+ +WN+++A ++ +A++ F
Sbjct: 157 RLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVF 216
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
M + P TF I +C+AL G+ H G DV + +A++ Y KC
Sbjct: 217 RFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKC 276
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G L +AR +FD + + +N V+W+++L Y QN EA+ L+ E + GG
Sbjct: 277 GRLDNARAIFDSLGK--KNTVTWSAILAAYAQNGYETEAIELYHEMVQ-----GGLE--- 326
Query: 182 DNVFVDSVAIASVLSACSRV--TVNGV---TEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
V+ + +L ACS +++GV F + F+ + LID R
Sbjct: 327 ----VNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYL----NLIDLLGRS 378
Query: 237 GHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNG 268
G + +S + + M E D+ W +++ +G
Sbjct: 379 GQLQLSEDLINSMPYEPDSSAWLALLGACRMHG 411
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/645 (35%), Positives = 370/645 (57%), Gaps = 34/645 (5%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP 77
KH +F + DK+ V ++N+++ ++ G +AL+ F++MR+ + T TF
Sbjct: 182 KHGLLAAARRVFLEMHDKDAV-TYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFS 240
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
+ + + L G Q H +VFV+++L+D YSKC L D R+LFDE+P+R
Sbjct: 241 SILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPER 300
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ VS+ ++ Y N A L LF+E + G + + A++LS
Sbjct: 301 --DNVSYNVIIAAYAWNQCAATVLRLFREM----QKLGFDRQ--------VLPYATMLSV 346
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
+ + + H ++ G SE +GN LID Y++ G +D ++ F EK A++W
Sbjct: 347 AGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISW 406
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
++I Y QNG EAL +F M + ++ + T S+++ A + L ++ LG+ +H +I
Sbjct: 407 TALITGYVQNGQHEEALQLFSDM-RRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLI 465
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ + SV G+ ++DMY KCG +D A + F++M E+N SW A+I+ Y + A+ A+
Sbjct: 466 RSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIK 525
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
+F M+ G P+ +TF+SVL+ACSH GL E + + M H+++I P EHY C++D L
Sbjct: 526 MFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTL 585
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GR G + ++ M KAD ++W S+L +CRIH N +L +AA KLF +EP + +V
Sbjct: 586 GRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYV 645
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
+LSNIYA AG+WED + +M++R + K G+S VE++ K+++F D P ++I +
Sbjct: 646 ILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKD 705
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
L+ L ++ + GY D+T +H VD E K +L+ HSE+LA
Sbjct: 706 ELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMK 765
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NL C DCH VI++ISK+V+R+I+VRDS+RFH+FKDG+CSCGDYW
Sbjct: 766 NLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 214/438 (48%), Gaps = 34/438 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCA--IKSCSALHDLHSGKQ 94
N +W ++ A G + +AL F +M + P R T + C+
Sbjct: 104 NATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-------PS 156
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H A FG VFV + L+D Y K G L+ AR++F E+ ++ V++ +M+ G +
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHD--KDAVTYNAMMMGCSKE 214
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+AL LF A+ + +S+L+ + + + H V
Sbjct: 215 GLHTQALQLF------------AAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALV 262
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
++ V V N+L+D Y++ +D R++FD M E+D V++N IIA YA N AA L
Sbjct: 263 LRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVL 322
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIA-HLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+F +M K + V A +L++A L + +GK IH Q++ + L ++G ++ID
Sbjct: 323 RLFREMQKLGFDR--QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALID 380
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY KCG +D A+ F+ EK+ SWTA+I GY + + EAL LF M +AG+RP+ T
Sbjct: 381 MYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRAT 440
Query: 394 FVSVLSACSHAGLVQEGWH---WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
F S++ A S ++ G +L G++ ++ G +VD+ + G L EA
Sbjct: 441 FSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSG----SVLVDMYAKCGCLDEALRTF 496
Query: 451 EGMKVKADFVVWGSLLGA 468
+ M + + + W +++ A
Sbjct: 497 DEMPER-NSISWNAVISA 513
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 157/317 (49%), Gaps = 24/317 (7%)
Query: 86 LHDLHSGKQAHQQAFIFG--FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
L L S H+ +F H+++F + ++ YS G+L A+ LF P R N +
Sbjct: 50 LRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHR--NATT 107
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
WT M+ + +AL LF+ L E V D V + +VL+ +
Sbjct: 108 WTIMMRAHAAAGRTSDALSLFRAMLGE------------GVIPDRVTVTTVLN------L 149
Query: 204 NGVT-EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
G T H F IK G D+ V V NTL+DAY + G + +R+VF M +KDAVT+N+++
Sbjct: 150 PGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMM 209
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
++ GL +AL +F M + + T S++L A + L LG +H V++
Sbjct: 210 GCSKEGLHTQALQLFAAM-RRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSV 268
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+V V S++D Y KC +D R+ F++M E++ S+ +IA Y + A L LF +M
Sbjct: 269 LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREM 328
Query: 383 IKAGVRPNYITFVSVLS 399
K G + + ++LS
Sbjct: 329 QKLGFDRQVLPYATMLS 345
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 14/180 (7%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N ++ AY+ G + ++ +F ++A TW ++ +A G ++AL +F M+ V
Sbjct: 78 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML-GEGV 136
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKC----IHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
+ VT++ VL L C +H IK L+ V V +++D YCK G +
Sbjct: 137 IPDRVTVTTVL---------NLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLA 187
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
AR+ F +M +K+ ++ AM+ G +AL LF M +AG+ + TF S+L+ +
Sbjct: 188 AARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAA 247
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/606 (38%), Positives = 354/606 (58%), Gaps = 42/606 (6%)
Query: 59 RAFSSMRKLSLTPTR--STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
R+F +R+ + TP S A+ SC ++ + ++ H + F +RD F+ L+
Sbjct: 27 RSFHLVRQCA-TPEAIVSALLIAVNSCPSISNC---REIHARVFKSLLYRDGFIGDQLVT 82
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
Y+K G DA KLFD++P + ++VSW S+++G+ + +L F E S
Sbjct: 83 CYNKLGYAEDALKLFDDMPHK--DLVSWNSLISGFSRC--LHMSLTAFYTMKFEMS---- 134
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
V + V I S++SACS G + HGF IK G EV V N+LI+ Y +
Sbjct: 135 -------VKPNEVTILSMISACSGALDAG--KYIHGFGIKVGGTLEVKVANSLINMYGKS 185
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G + + ++F+ + + + V+WNSIIA NG A E +D F++M + ++ + T+ A+
Sbjct: 186 GDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKM-RRLGIEQDEGTILAL 244
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A HLGV +L + IH + + + T+++D Y K G++ + F ++ +
Sbjct: 245 LQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADR 304
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+WTAM+AGY H REA+ LF M G+ P+++TF +LSACSH+GLV EG + N
Sbjct: 305 VAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNV 364
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M + IEP V+HY CMVDLLGR G L +AY++I+ M ++ + VWG+LLGACR+H N++
Sbjct: 365 MSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIE 424
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
LG+ A+ L +EP + +++LSN+Y+ + W+D + R+L+K R L +TPG+S +E
Sbjct: 425 LGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYG 484
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
K H F VGD+ HP+ EKIY LEEL K+++ GY + V+ DV++E KE + HSE
Sbjct: 485 NKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSE 544
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLR+CGDCH+ +LIS + R I++RD KRFH+F DG C
Sbjct: 545 KLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFC 604
Query: 639 SCGDYW 644
SC DYW
Sbjct: 605 SCADYW 610
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 21/257 (8%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S+++ K T+ LF D N V SWNS+IA G + E + F+ MR+L +
Sbjct: 176 NSLINMYGKSGDLTSACRLFEAIPDPNTV-SWNSIIAAQVTNGCAREGIDYFNKMRRLGI 234
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
T +++C L + H F GF + +++AL+D Y+K G LS +
Sbjct: 235 EQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYG 294
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F E+ R V+WT+ML GY + REA+ LF+ S + + D V
Sbjct: 295 VFTEVGFADR--VAWTAMLAGYAAHGLGREAIKLFE------------SMANKGLEPDHV 340
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
+LSACS + V EG F + G + V + ++D R G ++ + +V
Sbjct: 341 TFTHLLSACSHSGL--VNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVI 398
Query: 247 DGM-IEKDAVTWNSIIA 262
M +E +A W +++
Sbjct: 399 QNMPMEPNAGVWGALLG 415
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 246/720 (34%), Positives = 379/720 (52%), Gaps = 124/720 (17%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLS---------------------------- 68
+VFSWN +++ A+GG EA R F M +
Sbjct: 78 SVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMV 137
Query: 69 ---LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
+ PT+ T + SC+A+ L G++ H G + V+++L++MY+K G+
Sbjct: 138 SDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPV 197
Query: 126 DARKLFD----------------------------EIPQRI-RNIVSWTSMLTGYVQNDN 156
A+ +FD + Q I R++VSW +M++GY Q+
Sbjct: 198 TAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGF 257
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
REAL +F + L++ S D +AS LSAC+ + + + H +I+
Sbjct: 258 DREALDIFSKMLMDSSSKP-----------DKFTLASALSACANLENLKLGKQIHAHIIR 306
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVS---------------------------------R 243
FD+ VGN LI Y++ G V+++ R
Sbjct: 307 TEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPAR 366
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
++FD + +D V W ++I Y QNG +A+++F M+K K N TL+ +L + L
Sbjct: 367 RIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGP-KPNNYTLATMLSVSSSL 425
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAM 362
L G+ IH + SV V ++I MY K G ++ AR FN + +++ +WT+M
Sbjct: 426 ASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSM 485
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
I H EAL LF +M++ G++P++IT+V VLSAC+H GLV++G + N M +
Sbjct: 486 IIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHK 545
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
I P HY CM+DL GRAG L+EA+ IE M ++ D + WGSLL +C++HKNV+L E+AA
Sbjct: 546 IIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAA 605
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
++L +EP N G + L+N+Y+ G+WE+ R MK++ + K GFS V+++ KVH F
Sbjct: 606 ERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIF 665
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
V D HPQ + IYE + ++ +++++G+V D SV+HD+++E KE L HSEKLA
Sbjct: 666 GVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAF 725
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH+ I+ ISK+V REI+VRD+ RFH+FK+GLCSC DYW
Sbjct: 726 GLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 153/573 (26%), Positives = 258/573 (45%), Gaps = 106/573 (18%)
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
LT + ++ D +GK H + G H VF+ + L++ Y+K G + DA
Sbjct: 9 LTSPSDPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAH 68
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES----------ECGGAS 178
++FDE+P ++++ SW +L+GY + EA +F+E +S G
Sbjct: 69 RVFDEMP--VKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQF 126
Query: 179 EN---------SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTL 229
EN SD+V + +VL++C+ V G+ H FV+K G S + V N+L
Sbjct: 127 ENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSL 186
Query: 230 IDAYARGGH-------------------------------VDVSRKVFDGMIEKDAVTWN 258
++ YA+ G VD+++ F+ MIE+D V+WN
Sbjct: 187 LNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWN 246
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
++I+ Y Q+G EALD+F +M+ + K + TL++ L A A+L L+LGK IH +I+
Sbjct: 247 AMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIR 306
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDL---------------------------------AR 345
+ + VG ++I MY K G V++ AR
Sbjct: 307 TEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPAR 366
Query: 346 KAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
+ F+ ++ ++V +WTAMI GY + ++A++LF MIK G +PN T ++LS S
Sbjct: 367 RIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLA 426
Query: 406 LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
+ G + N V ++ + ++G + +A + + K D + W S+
Sbjct: 427 SLDHGRQIHASATRSGNAS-SVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSM 485
Query: 466 LGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
+ A H LGE A LFE ++P++ Y +LS + G E +LM
Sbjct: 486 IIALAQH---GLGE-EALTLFERMLENGIKPDHITYVGVLSAC-THVGLVEQGRSYYNLM 540
Query: 520 KN-RRLAKTPG--------FSLVELRGKVHAFL 543
+N ++ TP F L + HAF+
Sbjct: 541 QNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFI 573
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 200/409 (48%), Gaps = 59/409 (14%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
MKL +SS ++++S+ + F + ++++ V SWN++I+ + G EAL
Sbjct: 206 MKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERD-VVSWNAMISGYNQHGFDREALDI 264
Query: 61 FSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQ--------------AFIFGFH 105
FS M S P + T A+ +C+ L +L GKQ H A I +
Sbjct: 265 FSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYS 324
Query: 106 R-------------------DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ DV +AL+D Y K G+++ AR++FD + R+R++V+WT+
Sbjct: 325 KSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSL--RVRDVVAWTA 382
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ GYVQN ++A+ LF+ + E G N + +A++LS S +
Sbjct: 383 MIVGYVQNGFNQDAMELFRSMIKE-----GPKPN-------NYTLATMLSVSSSLASLDH 430
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYA 265
H + G S V V N LI YA+ G ++ +R VF+ + ++D +TW S+I A
Sbjct: 431 GRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALA 490
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q+GL EAL +F++M+++ +K + +T VL A H+G++ G+ ++ M +
Sbjct: 491 QHGLGEEALTLFERMLEN-GIKPDHITYVGVLSACTHVGLVEQGRSYYNL---MQNAHKI 546
Query: 326 IVGTS----IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
I S +ID++ + G + A M E +V +W +++A +H
Sbjct: 547 IPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVH 595
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 16/176 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN K + +W S+I LA+ G EAL F M + + P T+ + +C+ +
Sbjct: 469 VFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVG 528
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSS---ALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
+ G+ + + H+ + S +ID++ + G L +A + +P ++++W
Sbjct: 529 LVEQGRSYYN--LMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIE-PDVIAW 585
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
S+L + N A + + LL E E GA A+A+V SAC +
Sbjct: 586 GSLLASCKVHKNVELAEVAAERLLLIEPENSGAYS----------ALANVYSACGQ 631
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/645 (35%), Positives = 370/645 (57%), Gaps = 34/645 (5%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP 77
KH +F + DK+ V ++N+++ ++ G +AL+ F++MR+ + T TF
Sbjct: 182 KHGLLAAARRVFLEMHDKDAV-TYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFS 240
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
+ + + L G Q H +VFV+++L+D YSKC L D R+LFDE+P+R
Sbjct: 241 SILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPER 300
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ VS+ ++ Y N A L LF+E + G + + A++LS
Sbjct: 301 --DNVSYNVIIAAYAWNQCAATVLRLFREM----QKLGFDRQ--------VLPYATMLSV 346
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
+ + + H ++ G SE +GN LID Y++ G +D ++ F EK A++W
Sbjct: 347 AGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISW 406
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
++I Y QNG EAL +F M + ++ + T S+++ A + L ++ LG+ +H +I
Sbjct: 407 TALITGYVQNGQHEEALQLFSDM-RRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLI 465
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ + SV G+ ++DMY KCG +D A + F++M E+N SW A+I+ Y + A+ A+
Sbjct: 466 RSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIK 525
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
+F M+ G P+ +TF+SVL+ACSH GL E + + M H+++I P EHY C++D L
Sbjct: 526 MFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTL 585
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GR G + ++ M KAD ++W S+L +CRIH N +L +AA KLF +EP + +V
Sbjct: 586 GRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYV 645
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
+LSNIYA AG+WED + +M++R + K G+S VE++ K+++F D P ++I +
Sbjct: 646 ILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKD 705
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
L+ L ++ + GY D+T +H VD E K +L+ HSE+LA
Sbjct: 706 ELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMK 765
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NL C DCH VI++ISK+V+R+I+VRDS+RFH+FKDG+CSCGDYW
Sbjct: 766 NLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 214/438 (48%), Gaps = 34/438 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCA--IKSCSALHDLHSGKQ 94
N +W ++ A G + +AL F +M + P R T + C+
Sbjct: 104 NATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-------PS 156
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H A FG VFV + L+D Y K G L+ AR++F E+ ++ V++ +M+ G +
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHD--KDAVTYNAMMMGCSKE 214
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+AL LF A+ + +S+L+ + + + H V
Sbjct: 215 GLHTQALQLF------------AAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALV 262
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
++ V V N+L+D Y++ +D R++FD M E+D V++N IIA YA N AA L
Sbjct: 263 LRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVL 322
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIA-HLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+F +M K + V A +L++A L + +GK IH Q++ + L ++G ++ID
Sbjct: 323 RLFREMQKLGFDR--QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALID 380
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY KCG +D A+ F+ EK+ SWTA+I GY + + EAL LF M +AG+RP+ T
Sbjct: 381 MYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRAT 440
Query: 394 FVSVLSACSHAGLVQEGWH---WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
F S++ A S ++ G +L G++ ++ G +VD+ + G L EA
Sbjct: 441 FSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSG----SVLVDMYAKCGCLDEALRTF 496
Query: 451 EGMKVKADFVVWGSLLGA 468
+ M + + + W +++ A
Sbjct: 497 DEMPER-NSISWNAVISA 513
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 150/296 (50%), Gaps = 22/296 (7%)
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
H+++F + ++ YS G+L A+ LF P R N +WT M+ + +AL LF
Sbjct: 71 HKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHR--NATTWTIMMRAHAAAGRTSDALSLF 128
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT-EGAHGFVIKRGFDSEV 223
+ L E V D V + +VL+ + G T H F IK G D+ V
Sbjct: 129 RAMLGE------------GVIPDRVTVTTVLN------LPGCTVPSLHPFAIKFGLDTHV 170
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
V NTL+DAY + G + +R+VF M +KDAVT+N+++ ++ GL +AL +F M +
Sbjct: 171 FVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAM-RR 229
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL 343
+ T S++L A + L LG +H V++ +V V S++D Y KC +D
Sbjct: 230 AGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDD 289
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
R+ F++M E++ S+ +IA Y + A L LF +M K G + + ++LS
Sbjct: 290 MRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS 345
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/627 (37%), Positives = 362/627 (57%), Gaps = 34/627 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS-GKQA 95
++ SWN+VI+ AR G +LR F + + L P + T +++CS+L + + G+Q
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQV 421
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H A G D FVS+ALID+YSK G++ +A LF Q ++ SW +M+ G+ +D
Sbjct: 422 HTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHN--QDGFDLASWNAMMHGFTVSD 479
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
N REAL LF L+ E E +D + + A A+ + C G + H VI
Sbjct: 480 NYREALRLFS--LMHER-----GEKADQI---TFANAAKAAGCLVRLQQG--KQIHAVVI 527
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
K F ++ V + ++D Y + G + +RKVF+ + D V W ++I+ +NG +AL
Sbjct: 528 KMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALF 587
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+ QM + V+ + T + ++ A + L L GK IH ++K++ V TS++DMY
Sbjct: 588 TYHQM-RLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMY 646
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG ++ A F +M ++V W AMI G H A EAL+ F +M GV P+ +TF+
Sbjct: 647 AKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFI 706
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
VLSACSH+GL + + ++M + +EP +EHY C+VD L RAG ++EA ++ M
Sbjct: 707 GVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPF 766
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
+A ++ +LL ACR+ + + GE A+KLF ++P++ +VLLSNIYA A +WE+
Sbjct: 767 EASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSA 826
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
R++MK + K PGFS ++++ KVH F+ GD+ H + + IY +E + +++E GYV D
Sbjct: 827 RNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDT 886
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
+ D+++E+KE L HSEKLA NLRVCGDCH I+ IS V
Sbjct: 887 EFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNV 946
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
REIV+RD+ RFH+F+ G+CSCGDYW
Sbjct: 947 FQREIVLRDANRFHHFRSGICSCGDYW 973
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 224/485 (46%), Gaps = 74/485 (15%)
Query: 15 NVDKHSTNTNLTTLFNK--------------YVDKNNVFSWNSVIADLARGGD------S 54
N D++ TN NL T++ K ++ ++N+++A A G+ +
Sbjct: 45 NPDRYVTN-NLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKT 103
Query: 55 VEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ-QAFIFGFHRDVFVSSA 113
EA F +R+ + TR T K C L+ S +A Q A G DVFV+ A
Sbjct: 104 HEAFHIFRLLRQSVMLTTRHTLSPLFKLC-LLYGSPSASEALQGYAVKIGLQWDVFVAGA 162
Query: 114 LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
L+++Y+K + +AR LFD +P +R++V W M+ YV+ E L LF F
Sbjct: 163 LVNIYAKFQRIREARVLFDRMP--VRDVVLWNVMMKAYVEMGAGDEVLGLFSAF------ 214
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY 233
+ + D V++ ++L + TV F+ E+ + AY
Sbjct: 215 ------HRSGLRPDCVSVRTILMGVGKKTV---------------FEREL----EQVRAY 249
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
A K+F + D WN ++ Y Q G EA+D F M+KS V C+++T
Sbjct: 250 AT--------KLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSR-VPCDSLTY 300
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
+L +A L L LGK IH V++ ++ V V S I+MY K G V+ AR+ F QMKE
Sbjct: 301 IVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKE 360
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
++ SW +I+G +L LF ++++G+ P+ T SVL ACS E +
Sbjct: 361 VDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSL----EESYC 416
Query: 414 LNTMGHEFNIEPGV--EHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
+ H ++ G+ + + ++D+ + GK++EA +L+ + D W +++
Sbjct: 417 VGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEA-ELLFHNQDGFDLASWNAMMHGF 475
Query: 470 RIHKN 474
+ N
Sbjct: 476 TVSDN 480
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 183/425 (43%), Gaps = 74/425 (17%)
Query: 65 RKLSLTPTRSTFP---CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
RK S++P+ S P ++ A DL GK+ H G + D +V++ LI MY+KC
Sbjct: 3 RKCSVSPS-SLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKC 61
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN------DNAREALLLFKEFLLEESECG 175
G L ARKLFD PQ R++V++ ++L Y + EA +F+ LL +S
Sbjct: 62 GSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFR--LLRQSV-- 117
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
+ ++ + C +E G+ +K G +V V L++ YA+
Sbjct: 118 --------MLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAK 169
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
+ +R +FD M +D V WN ++ Y + G E L +F +S ++ + V++
Sbjct: 170 FQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRS-GLRPDCVSVRT 228
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
+L+ + GK V + +LE+ + Y A K F + +
Sbjct: 229 ILMGV--------GK---KTVFERELEQ--------VRAY--------ATKLFVCDDDSD 261
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HA 404
V W ++ Y EA+D F MIK+ V + +T++ +LS + H
Sbjct: 262 VTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHG 321
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGS 464
+V+ GW ++ + +++ +AG + A + MK + D + W +
Sbjct: 322 AVVRFGWDQFVSVANS------------AINMYVKAGSVNYARRMFGQMK-EVDLISWNT 368
Query: 465 LLGAC 469
++ C
Sbjct: 369 VISGC 373
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/630 (35%), Positives = 353/630 (56%), Gaps = 33/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++ +V SW+++I L + G S EA F MR + P + T + + + L DL+ G
Sbjct: 391 IEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYG 450
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H +GF D V +AL+ MY K G + D ++F+ R +++SW ++L+G+
Sbjct: 451 ESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNR--DLISWNALLSGFH 508
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N+ L +F + L E G + N S+L +CS ++ + + H
Sbjct: 509 DNETCDTGLRIFNQMLAE-----GFNPNM-------YTFISILRSCSSLSDVDLGKQVHA 556
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++K D VG L+D YA+ ++ + +F+ +I++D W I+A YAQ+G +
Sbjct: 557 QIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEK 616
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+ F QM + VK N TL++ L + + L G+ +H IK + V ++++
Sbjct: 617 AVKCFIQMQRE-GVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALV 675
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG V+ A F+ + ++ SW +I GY H + +AL F M+ G P+ +
Sbjct: 676 DMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEV 735
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+ VLSACSH GL++EG N++ + I P +EHY CMVD+LGRAGK E IE
Sbjct: 736 TFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEE 795
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
MK+ ++ ++W ++LGAC++H N++ GE AA KLFELEP ++LLSN++A G W+DV
Sbjct: 796 MKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDV 855
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R+LM R + K PG S VE+ G+VH FL D HP+ +I+ L++L+ KL VGY
Sbjct: 856 TNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYT 915
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
+ V+H+V EK+ L HSE+LA NLR+CGDCH ++ I
Sbjct: 916 PNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSI 975
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S++ ++E+VVRD FH+FK+G CSC ++W
Sbjct: 976 SEITNQELVVRDINCFHHFKNGSCSCQNFW 1005
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 213/410 (51%), Gaps = 39/410 (9%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+++C++ DL+ GK H Q G + D + ++L+++Y+KCG + A K+F EIP+R
Sbjct: 135 LRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER-- 192
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++VSWT+++TG+V A+ LF E E E + A+ L ACS
Sbjct: 193 DVVSWTALITGFVAEGYGSGAVNLFCEMRREGVE------------ANEFTYATALKACS 240
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ H IK G S++ VG+ L+D YA+ G + ++ +VF M +++AV+WN+
Sbjct: 241 MCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNA 300
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
++ +AQ G A + L++F +M S ++ + TLS VL A+ G LR G+ +H I++
Sbjct: 301 LLNGFAQMGDAEKVLNLFCRMTGS-EINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRI 359
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
E + ++DMY KCG A K F ++++ +V SW+A+I ++REA ++F
Sbjct: 360 GCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVF 419
Query: 380 YKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGWHWLNTMGHEFNIEPGVE 428
+M +GV PN T S++SA + HA + + G+ + NT+ +
Sbjct: 420 KRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNA-------- 471
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
+V + + G +++ + E + D + W +LL ++ D G
Sbjct: 472 ----LVTMYMKIGSVQDGCRVFEATTNR-DLISWNALLSGFHDNETCDTG 516
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 185/370 (50%), Gaps = 15/370 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +V SW ++I G A+ F MR+ + T+ A+K+CS DL G
Sbjct: 189 IPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFG 248
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H +A G D+FV SAL+D+Y+KCGE+ A ++F +P+ +N VSW ++L G+
Sbjct: 249 KQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPK--QNAVSWNALLNGFA 306
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q +A + L LF E + +++VL C+ + H
Sbjct: 307 QMGDAEKVLNLFCRMTGSE------------INFSKFTLSTVLKGCANSGNLRAGQIVHS 354
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
I+ G + + + L+D Y++ G + KVF + + D V+W++II Q G + E
Sbjct: 355 LAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSRE 414
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A +VF +M + + V N TL++++ A LG L G+ IH V K E V +++
Sbjct: 415 AAEVFKRM-RHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALV 473
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
MY K G V + F +++ SW A+++G+ + L +F +M+ G PN
Sbjct: 474 TMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMY 533
Query: 393 TFVSVLSACS 402
TF+S+L +CS
Sbjct: 534 TFISILRSCS 543
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%)
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
S +L A G L GK IH QVIK + + S++++Y KCG + A K F ++ E
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
++V SWTA+I G+ A++LF +M + GV N T+ + L ACS
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACS 240
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/665 (35%), Positives = 367/665 (55%), Gaps = 63/665 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +++N V SW S+I + + EA+ F M ++ + P T CAI +C+ L
Sbjct: 179 VFDEMLERN-VVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLK 237
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL GK+ G + V +AL+DMY KCG++ R++FDE + N+V + ++
Sbjct: 238 DLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDK--NLVMYNTI 295
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ YVQ+ A E L++ E L + D V + S ++AC+++ V
Sbjct: 296 MSNYVQHGLAGEVLVVLDEMLQKGQR------------PDKVTMLSTIAACAQLGDLSVG 343
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ +H +V + G + + N +ID Y + G + + KVFD M K VTWNS+IA ++
Sbjct: 344 KSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRD 403
Query: 268 GLAAEALDVFDQMVKSTDVKCNA------------------------------VTLSAVL 297
G AL +F +M +S V N VT+ +
Sbjct: 404 GELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIA 463
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A +LG L L K I+ + K D+ + +GT+++DM+ +CG A + F M++++V
Sbjct: 464 SACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVS 523
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
+WTA I + A+ A++LF +M+K V+ + FV++L+A SH G V +G M
Sbjct: 524 AWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAM 583
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
+ P + HYGCMVDLLGRAG L+EA+DL++ M +K + V+WGS L ACR HKNV+
Sbjct: 584 EKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEF 643
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG 537
A +K+ +L P G HVLLSNIYA+AG+W DV R R MK + K G S +E+ G
Sbjct: 644 ANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHG 703
Query: 538 KVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
+ F GD+ H ++ +I L+E+N ++ +VGYV D T+V+ DVD++EKE L HSEK
Sbjct: 704 LIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEK 763
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA NLR+C DCH+ +L+SK+ REI VRD+ R+H+FK+G CS
Sbjct: 764 LAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCS 823
Query: 640 CGDYW 644
C D+W
Sbjct: 824 CRDFW 828
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 201/409 (49%), Gaps = 34/409 (8%)
Query: 69 LTPTRSTFP--CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG---E 123
L PT + P ++++C L +L KQ H + VF + LI + G
Sbjct: 16 LLPTTTQKPKNSSLQTCKTLIEL---KQLHCNML----KKGVFNINKLIAACVQMGTHES 68
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L+ A F E ++ + +++ GY + +EA+ ++ ++
Sbjct: 69 LNYALNAFKEDEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMG----------- 117
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ D+ +LSACS++ HG V+K G ++ V N+LI YA G VD+ R
Sbjct: 118 IVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGR 177
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
KVFD M+E++ V+W S+I Y+ +A EA+ +F +MV+ V+ N VT+ + A A L
Sbjct: 178 KVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVE-VGVEPNPVTMVCAISACAKL 236
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L LGK + + + ++ ++ + +V +++DMY KCG + R+ F++ +KN+ + ++
Sbjct: 237 KDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIM 296
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
+ Y H A E L + +M++ G RP+ +T +S ++AC+ G + G H +
Sbjct: 297 SNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVG-----KSSHAYVF 351
Query: 424 EPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
G+E ++D+ + GK + A + + M K V W SL+
Sbjct: 352 RNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKT-VVTWNSLIAG 399
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 245/638 (38%), Positives = 360/638 (56%), Gaps = 37/638 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +++ V SWN+++ A+ G EA F+ M + P++ T A CS+L
Sbjct: 282 VFDRAAERD-VVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLR 340
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H A G RD+ + +AL+DMY++CG +AR LF+ IP N VSW +M
Sbjct: 341 ---FGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG---NAVSWNTM 394
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G Q + AL LF+ LE G A + + + + +V S
Sbjct: 395 IAGSSQKGQMKRALELFQRMQLE----GMAPVRATYLNL----LEAVASNPEEARAMAEG 446
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD-GMIEK--DAVTWNSIIAIY 264
H ++ G+ SE +G ++ YA G +D + F G +E D V+WN+II+
Sbjct: 447 RKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSL 506
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
+Q+G AL F +M V N +T AVL A A L G +HD + +E +
Sbjct: 507 SQHGHGKRALGFFRRM-DLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESN 565
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
V V T++ MY +CG ++ AR+ F ++ E++V + AMIA Y + A EAL LF++M
Sbjct: 566 VFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQ 625
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ G RP+ +FVSVLSACSH GL EGW +M + I P +HY C VD+LGRAG L
Sbjct: 626 QEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWL 685
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
+A +LI M VK +VW +LLGACR +++VD G +A + EL+P + +V+LSNI
Sbjct: 686 ADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNIL 745
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A AG+W++ R+ M++R L K G S +E++ +VH F+ GD+ HP+ E+IY LE L+
Sbjct: 746 AGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLH 805
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------NLRVCGD 606
+++E+GYV D V+ VD+ EKE L HSE+LA NLRVC D
Sbjct: 806 AEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSSTDTVRVMKNLRVCED 865
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH + ISK+V++EIVVRD+ RFH+F DG CSCGDYW
Sbjct: 866 CHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 221/448 (49%), Gaps = 32/448 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF + + ++ SWN+ IA A+ GD AL F M+ + P R T + C+
Sbjct: 185 LFERM--ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCA--- 239
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ + H G + + VS+AL Y++ G L A+++FD + R++VSW +M
Sbjct: 240 KIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAE--RDVVSWNAM 297
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
L Y Q+ + EA LLF L E + V + + + CS + +
Sbjct: 298 LGAYAQHGHMSEAALLFARMLHE------------GIPPSKVTLVNASTGCSSLRFGRMI 345
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H +++G D ++ +GN L+D Y R G + +R +F+G I +AV+WN++IA +Q
Sbjct: 346 ---HACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEG-IPGNAVSWNTMIAGSSQK 401
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA----HLGVLRLGKCIHDQVIKMDLEE 323
G AL++F +M A L+ +L A+A + G+ +H +++
Sbjct: 402 GQMKRALELFQRMQLEGMAPVRATYLN-LLEAVASNPEEARAMAEGRKLHSRIVSCGYAS 460
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQ--MKEK-NVRSWTAMIAGYGMHCRAREALDLFY 380
+GT+++ MY CG +D A +F + M+++ +V SW A+I+ H + AL F
Sbjct: 461 EPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFR 520
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+M GV PN IT V+VL AC+ A + EG + + H +E V + + GR
Sbjct: 521 RMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHS-GMESNVFVATALASMYGRC 579
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGA 468
G L+ A ++ E + V+ D V++ +++ A
Sbjct: 580 GSLESAREIFEKVAVERDVVIFNAMIAA 607
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 176/363 (48%), Gaps = 27/363 (7%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SW ++I G + A+ F M++ + TF +K+C+ L DL G+ H
Sbjct: 95 SWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWI 154
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G +++ L+ +Y CG ++ A LF+ + R++VSW + + Q+ +
Sbjct: 155 VESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME---RDLVSWNAAIAANAQSGDLDM 211
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
AL LF+ LE V + + LS C+++ H V + G
Sbjct: 212 ALELFQRMQLE------------GVRPARITLVITLSVCAKIR---QARAIHSIVRESGL 256
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+ + V L AYAR GH+D +++VFD E+D V+WN+++ YAQ+G +EA +F +
Sbjct: 257 EQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFAR 316
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGV--LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
M+ + S V L A G LR G+ IH ++ L+ +++G +++DMY +
Sbjct: 317 MLH------EGIPPSKVTLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTR 370
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
CG + AR F + N SW MIAG + + AL+LF +M G+ P T++++
Sbjct: 371 CGSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNL 429
Query: 398 LSA 400
L A
Sbjct: 430 LEA 432
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 210/444 (47%), Gaps = 47/444 (10%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L G++ H + G ++ + L+ +Y KC L D ++F + +R+ SWT+++
Sbjct: 45 LSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRL--EVRDEASWTTII 100
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
T Y ++ A+ A+ +F E C D+V +VL AC+R+
Sbjct: 101 TAYTEHGQAKRAIWMFHRMQQEGVRC------------DAVTFLAVLKACARLGDLSQGR 148
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H ++++ G + + + N L+ Y G V + +F+ M E+D V+WN+ IA AQ+G
Sbjct: 149 SIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSG 207
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
AL++F +M + V+ +TL L A + R + IH V + LE++++V
Sbjct: 208 DLDMALELFQRM-QLEGVRPARITLVITLSVCAKI---RQARAIHSIVRESGLEQTLVVS 263
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
T++ Y + G +D A++ F++ E++V SW AM+ Y H EA LF +M+ G+
Sbjct: 264 TALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIP 323
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLK 444
P+ +T V+ + CS M H +E G++ ++D+ R G +
Sbjct: 324 PSKVTLVNASTGCSSLR--------FGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPE 375
Query: 445 EAYDLIEGMKVKADFVVWGSLLGAC----RIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
EA L EG + + V W +++ ++ + ++L +L + P Y LL
Sbjct: 376 EARHLFEG--IPGNAVSWNTMIAGSSQKGQMKRALEL--FQRMQLEGMAPVRATYLNLLE 431
Query: 501 NIYANAGRWEDVERTRSLMKNRRL 524
+ +N E R++ + R+L
Sbjct: 432 AVASNP------EEARAMAEGRKL 449
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/543 (40%), Positives = 325/543 (59%), Gaps = 35/543 (6%)
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G++S AR+LFDE+ + R + W +++ GYV+N +A+ ++ +
Sbjct: 83 GDMSYARQLFDEM-HKPRPFL-WNTIMKGYVKNGIPDKAVSVYGKM------------RH 128
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
V D V+ AC+ + G HG V+K G + V L+ Y + G +
Sbjct: 129 LGVRPDPFTFPFVIKACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGC 188
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ +F M+E+D V WN++IA+ Q G +++AL F +M +K ++VT+ + L A
Sbjct: 189 AEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQSFREM-GMAGIKPDSVTIVSALSACG 247
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
HLG L G+ I++ + ++ ++IV + +DM KCG +D A F++M ++NV SW+
Sbjct: 248 HLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWST 307
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH-- 419
+I GY ++ + +AL LF +M GV+PNY+TF++VLSACSH G V EGW + N M
Sbjct: 308 VIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSD 367
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
+ NI+P EHY CMVDLLGR+G L+EAY+ I+ M ++AD +WG+LLGAC IH+N+ LG+
Sbjct: 368 DKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQ 427
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
A LFEL P YHVLLSN+YA AGRW VE+ R MK + K +S VE G++
Sbjct: 428 HVADLLFELAPEIASYHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEI 487
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
H GDK HPQ I LE+L +++ +GY+ + SV HDV+ EEKE TL HSEKLA
Sbjct: 488 HILYGGDKSHPQSASILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLA 547
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLR+CGDCHT +L+S++ REI++RD RFH+FK+G+CSC
Sbjct: 548 IAFSLINGSPKFPIRVMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCK 607
Query: 642 DYW 644
D+W
Sbjct: 608 DFW 610
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 171/349 (48%), Gaps = 26/349 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + K F WN+++ + G +A+ + MR L + P TFP IK+C+ L
Sbjct: 91 LFDE-MHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAELA 149
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L +G H G V + L+ MY K GEL A LF + + R++V+W ++
Sbjct: 150 ELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVE--RDLVAWNAL 207
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ VQ + +AL F+E + + DSV I S LSAC +
Sbjct: 208 IAVCVQTGFSSKALQSFREMGMA------------GIKPDSVTIVSALSACGHLGCLETG 255
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
E + F + G DS + V N +D A+ G +D + +FD M +++ ++W+++I YA N
Sbjct: 256 EEIYEFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVN 315
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD---LEES 324
G + +AL +F +M K+ V+ N VT AVL A +H G + G + + + D ++
Sbjct: 316 GESEKALALFSRM-KNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPR 374
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMK----EKNVRSWTAMIAGYGMH 369
++D+ + G ++ +A+N +K E + W A++ +H
Sbjct: 375 KEHYACMVDLLGRSGHLE---EAYNFIKIMPIEADPGIWGALLGACAIH 420
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/609 (38%), Positives = 354/609 (58%), Gaps = 48/609 (7%)
Query: 59 RAFSSMRKLSLTPTR--STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
R+F +R+ + TP S A+ SC ++ + ++ H + F +RD F+ L+
Sbjct: 27 RSFHLVRQCA-TPEAIVSALLIAVNSCPSISNC---REIHARVFKSLLYRDGFIGDQLVT 82
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
Y+K G DA KLFD++P + ++VSW S+++G+ + +L F E S
Sbjct: 83 CYNKLGYAEDALKLFDDMPHK--DLVSWNSLISGFSRC--LHMSLTAFYTMKFEMS---- 134
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA---HGFVIKRGFDSEVGVGNTLIDAY 233
V + V I S++SAC NG + HGF IK G EV V N+LI+ Y
Sbjct: 135 -------VKPNEVTILSMISAC-----NGALDAGKYIHGFGIKVGGTLEVKVANSLINMY 182
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ G + + ++F+ + + + V+WNSIIA NG A E +D F++M + ++ + T+
Sbjct: 183 GKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKM-RRLGIEQDEGTI 241
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
A+L A HLGV +L + IH + + + T+++D Y K G++ + F ++
Sbjct: 242 LALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGF 301
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
+ +WTAM+AGY H REA+ LF M G+ P+++TF +LSACSH+GLV EG +
Sbjct: 302 ADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSY 361
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
N M + IEP V+HY CMVDLLGR G L +AY++I+ M ++ + VWG+LLGACR+H
Sbjct: 362 FNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHG 421
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
N++LG+ A+ L +EP + +++LSN+Y+ + W+D + R+L+K R L +TPG+S +
Sbjct: 422 NIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSI 481
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
E K H F VGD+ HP+ EKIY LEEL K+++ GY + V+ DV++E KE +
Sbjct: 482 EYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINK 541
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSEKLA NLR+CGDCH+ +LIS + R I++RD KRFH+F D
Sbjct: 542 HSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSD 601
Query: 636 GLCSCGDYW 644
G CSC DYW
Sbjct: 602 GFCSCADYW 610
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 21/257 (8%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S+++ K T+ LF D N V SWNS+IA G + E + F+ MR+L +
Sbjct: 176 NSLINMYGKSGDLTSACRLFEAIPDPNTV-SWNSIIAAQVTNGCAREGIDYFNKMRRLGI 234
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
T +++C L + H F GF + +++AL+D Y+K G LS +
Sbjct: 235 EQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYG 294
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F E+ R V+WT+ML GY + REA+ LF+ S + + D V
Sbjct: 295 VFTEVGFADR--VAWTAMLAGYAAHGLGREAIKLFE------------SMANKGLEPDHV 340
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
+LSACS + V EG F + G + V + ++D R G ++ + +V
Sbjct: 341 TFTHLLSACSHSGL--VNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVI 398
Query: 247 DGM-IEKDAVTWNSIIA 262
M +E +A W +++
Sbjct: 399 QNMPMEPNAGVWGALLG 415
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/607 (38%), Positives = 350/607 (57%), Gaps = 67/607 (11%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS--WTSMLT 149
G+QAH Q + G + F+++ ++ MY+ G+L A +FD RI N S + S++
Sbjct: 96 GQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFD----RIDNPSSLLYNSIIR 151
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
Y ++ + + A + + D+ + VL +C+ ++ +
Sbjct: 152 AYTRHGXXXXXXXXLEAY---------ARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRC 202
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY----- 264
HG ++ G + + VG +LID Y + G + +RK+FD MI +D +WN++IA Y
Sbjct: 203 VHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGE 262
Query: 265 --------------------------AQNGLAAEALDVFDQMVK-STDVKCNAVTLSAVL 297
QNG A +AL +FD+M++ +++K N VT+ +VL
Sbjct: 263 IGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVL 322
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE--KN 355
A A L G+ IHD + L + V T++ MY KC + AR F+ + + KN
Sbjct: 323 PACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKN 382
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
+ +W MI Y H EA+ +F M++AGV+P+ +TF+ +LS CSH+GL+ G + N
Sbjct: 383 LIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFN 442
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
MG ++EP VEHY C+VDLLGRAG+L EA +LI M ++A VWG+LL ACR H+N+
Sbjct: 443 DMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNL 502
Query: 476 DLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVEL 535
++ E+AA++LF LEP+N G +VLLSN+YA AG WE+V++ R+L+K + + K+PG S +E+
Sbjct: 503 EIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEI 562
Query: 536 RGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHS 595
GK H F+ DK HPQ ++IY++LE L K++ GY+ D + V+HD+ +EEKE L HS
Sbjct: 563 NGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHS 622
Query: 596 EKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGL 637
EKLA NLR+CGDCH + ISK+ +REI+VRD RFH FKDG
Sbjct: 623 EKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGS 682
Query: 638 CSCGDYW 644
CSCGDYW
Sbjct: 683 CSCGDYW 689
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 175/382 (45%), Gaps = 51/382 (13%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEA---LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDL 89
+D + +NS+I R G L A++ M L L T P +KSC+ L +
Sbjct: 138 IDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRV 197
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR------------ 137
G+ H Q G D +V ++LIDMY KCG + DARKLFD++ R
Sbjct: 198 CMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGY 257
Query: 138 -----------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
RNIVSWT+M++GY QN A +AL LF E L + SE
Sbjct: 258 MKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSE------- 310
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+ + V I SVL AC++ H F G V L YA+ +
Sbjct: 311 ---MKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLV 367
Query: 241 VSRKVFDGMIE--KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
+R FD + + K+ + WN++I YA +G EA+ +F+ M+++ V+ +AVT +L
Sbjct: 368 EARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRA-GVQPDAVTFMGLLS 426
Query: 299 AIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
+H G++ G +D +E V ++D+ + G++ A++ +QM +
Sbjct: 427 GCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGP 486
Query: 358 S-WTAMIAGYGMHCRAREALDL 378
S W A++A CR+ L++
Sbjct: 487 SVWGALLAA----CRSHRNLEI 504
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 81/186 (43%), Gaps = 11/186 (5%)
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
++LG+ H Q++ L+ + + ++ MY G +D A F+++ + + ++I
Sbjct: 93 IKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRA 152
Query: 366 YGMH---CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
Y H L+ + +M G+ + T VL +C+ V G ++ G
Sbjct: 153 YTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMG-RCVHGQGLRVG 211
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA- 481
+E ++D+ + G + +A L + M V+ D W +L+ + GEI
Sbjct: 212 LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVR-DMASWNALIAG-----YMKEGEIGV 265
Query: 482 AKKLFE 487
A+ LFE
Sbjct: 266 AEDLFE 271
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/640 (35%), Positives = 353/640 (55%), Gaps = 34/640 (5%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
N L + V +W ++I+ + G AL FS MR+ ++ P TFPCA K+
Sbjct: 8 PNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKA 67
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
+AL +GKQ H A G D FV + DMYSK G +A++LFDE+P R N+
Sbjct: 68 STALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPR--NVA 125
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
W + ++ V + +A+ F EF GG D + + L+AC+
Sbjct: 126 VWNAYISNAVLDGRPGKAIDKFIEF----RRVGGEP--------DLITFCAFLNACADAR 173
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ HG VI+ GF+ +V V N +ID Y + V+++ VF+GM +++V+W +++A
Sbjct: 174 CLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVA 233
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
QN +A VF M + ++ +S+V+ A A + L G+ +H +K +E
Sbjct: 234 ACEQNDEKEKACVVF-LMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVE 292
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ VG++++DMY KCG ++ + F++M E+N+ SW AMI+GY A+ LF +M
Sbjct: 293 GDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEM 352
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
V NY+T + VLSACS G V+ G +M + IEPG EHY C+ D+LGRAG
Sbjct: 353 QSEAV-ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGM 411
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
++ AY+ ++ M ++ VWG+LL ACR++ +LG+IAA LF+L+P + G HVLLSN+
Sbjct: 412 VERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNM 471
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
+A AGRW++ R MK+ + K G S V + KVH F D H ++ +I L +L
Sbjct: 472 FAAAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKL 531
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVC 604
++Q GY+ D ++D+++EEK + HSEK+A NLR+C
Sbjct: 532 RTEMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRIC 591
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
GDCH+ + IS +V REI+VRD+ RFH F+D CSC D+W
Sbjct: 592 GDCHSAFKFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 168/372 (45%), Gaps = 23/372 (6%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MYSK + A+ L P R +V+WT++++G VQN ALL F + E
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRC--VVTWTALISGSVQNGYFSSALLYFSKMRRE------ 52
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
N+ + A + + + + H +K G ++ VG + D Y++
Sbjct: 53 ------NIKPNDFTFPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKT 106
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G ++++FD M ++ WN+ I+ +G +A+D F + + + + +T A
Sbjct: 107 GLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEF-RRVGGEPDLITFCAF 165
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A A L LG+ +H VI+ E V V IID+Y KC +V+LA FN M +N
Sbjct: 166 LNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNS 225
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ-EGWHWLN 415
SW M+A + +A +F K G+ SV+SA +AG+ E ++
Sbjct: 226 VSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISA--YAGISGLEFGRSVH 283
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
+ + +E + +VD+ G+ G +++ + M + + V W +++ +V
Sbjct: 284 ALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPER-NLVSWNAMISGYAHQGDV 342
Query: 476 DLGEIAAKKLFE 487
D+ A LFE
Sbjct: 343 DM----AMTLFE 350
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 145/357 (40%), Gaps = 64/357 (17%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
SV++ + +V L + + + N SW +++A + + +A F RK
Sbjct: 195 SVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKE 254
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
+ T I + + + L G+ H A D+FV SAL+DMY KCG + D
Sbjct: 255 GIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDC 314
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
++F E+P+ RN+VSW +M++GY + A+ LF+E E +
Sbjct: 315 EQVFHEMPE--RNLVSWNAMISGYAHQGDVDMAMTLFEEMQSE-------------AVAN 359
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
V + VLSACS RGG V + ++F+
Sbjct: 360 YVTLICVLSACS-----------------------------------RGGAVKLGNEIFE 384
Query: 248 GM-----IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
M IE A + I + + G+ A + V+ ++ A+L A
Sbjct: 385 SMRDRYRIEPGAEHYACIADMLGRAGMVERAY----EFVQKMPIRPTISVWGALLNACRV 440
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSII--DMYCKCGQVDLARKAFNQMKEKNVR 357
G LGK D + K+D ++S G ++ +M+ G+ D A +MK+ ++
Sbjct: 441 YGEPELGKIAADNLFKLDPKDS---GNHVLLSNMFAAAGRWDEATLVRKEMKDVGIK 494
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/566 (40%), Positives = 337/566 (59%), Gaps = 40/566 (7%)
Query: 104 FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
F D F+S+ LI+ Y+ L AR++FDE P ++NI W +ML D+ EAL
Sbjct: 280 FRSDPFLSTRLIEAYAALSALPAARQVFDEAP--VKNIFVWNAMLKALALADHGEEALTC 337
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA-----HGFVIKRG 218
+ V VDS + A L AC + + + A H I+RG
Sbjct: 338 LADM------------GRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRG 385
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
+ V TLID YA+ G V + +VF M +++ V+W+++I YA+N +A+ +F
Sbjct: 386 YGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQ 445
Query: 279 QMVKS-TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
+M+ S D+ N++T+ +VL A A + L GK +H +++ + V V +++ MY K
Sbjct: 446 EMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMK 505
Query: 338 CGQVDLARKAFNQM-KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
CG ++ R FN + + +NV SW ++I+GYGMH RE+L +F +MI+ G+ PN ITFVS
Sbjct: 506 CGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVS 565
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VL ACSH GLV++G +M E+N+ P EHY CMVDLLGRAG+L EA +LI+ M+++
Sbjct: 566 VLGACSHVGLVEQGKKLFESMV-EYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQ 624
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
VWGSLLGACRIH +V+ E+A LF+LEP N G +VLL++IYA A V+ +
Sbjct: 625 PSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLK 684
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
L++ L K PG S +E++ K+++F+ D ++PQ E++ + E +++ GYV D
Sbjct: 685 ELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTR 744
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
SV++D+++EEKE L HSEKLA NLR+C DCH+V + ISK
Sbjct: 745 SVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFT 804
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
DREIVVRD RFH+F++G+CSC DYW
Sbjct: 805 DREIVVRDVNRFHHFRNGVCSCRDYW 830
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 183/341 (53%), Gaps = 20/341 (5%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC---SALHDLHSG 92
N+F WN+++ LA EAL + M +L + ++ +K+C SA H S
Sbjct: 313 KNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASASHLPASA 372
Query: 93 --KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
++ H A G+ V++ LID Y+K G +S A ++F +P RN+VSW++M+
Sbjct: 373 RVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPD--RNLVSWSAMIGC 430
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y +N+ +A+ +F+E + ++ ++ +S+ I SVL AC+ V G +
Sbjct: 431 YAKNERPGDAIQIFQEMMASDA----------DLVPNSITIVSVLHACAGVNALGQGKVL 480
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGL 269
H ++++RGFD V V N L+ Y + G ++ R +F+ + ++ V+WNS+I+ Y +G
Sbjct: 481 HAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGF 540
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
E+L VF++M++ + N +T +VL A +H+G++ GK + + +++ ++
Sbjct: 541 GRESLQVFEEMIEE-GISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHYA 599
Query: 330 SIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + G++D A + M+ + + + W +++ +H
Sbjct: 600 CMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACRIH 640
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 33/245 (13%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPCAIKSCSA 85
+F D+N V SW+++I A+ +A++ F M L P T + +C+
Sbjct: 412 VFTSMPDRNLV-SWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAG 470
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
++ L GK H GF V V +AL+ MY KCG L R +F+ I +R RN+VSW
Sbjct: 471 VNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRR-RNVVSWN 529
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
S+++GY + RE+L +F+E + E G S N + SVL ACS V +
Sbjct: 530 SLISGYGMHGFGRESLQVFEEMIEE-----GISPN-------IITFVSVLGACSHVGL-- 575
Query: 206 VTEGAHGFVIKRGFDSEVGVGNT--------LIDAYARGGHVDVSRKVFDGM-IEKDAVT 256
V +G K+ F+S V T ++D R G +D + ++ M I+
Sbjct: 576 VEQG------KKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQV 629
Query: 257 WNSII 261
W S++
Sbjct: 630 WGSLL 634
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/630 (36%), Positives = 365/630 (57%), Gaps = 37/630 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD---LHSGK 93
++ SWN++I+ A+ +EA+ F + + L P + T +++CS + G
Sbjct: 959 DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGS 1018
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H A G D FVS+ALID+YSK G++ +A L + ++ SW +++ GY++
Sbjct: 1019 QVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHG--KYDFDLASWNAIMFGYIK 1076
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
++ +R+AL F L+ E + +D + +A+ + A + + +
Sbjct: 1077 SNKSRKALEHFS--LMHEM----------GIPIDEITLATAIKASGCLINLKQGKQIQAY 1124
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
IK GF++++ V + ++D Y + G + + ++F + D V W ++I+ Y +NG A
Sbjct: 1125 AIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHA 1184
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L V+ +++ + V+ + T + ++ A + L L GK IH V+K+D VGTS++D
Sbjct: 1185 LSVY-HLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVD 1243
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MYCKCG V A + F +M + V W AM+ G H EAL+LF M G++P+ +T
Sbjct: 1244 MYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVT 1303
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
F+ VLSACSH+GL E + + + M + I P +EHY C+VD LGRAG+++EA ++I M
Sbjct: 1304 FIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASM 1363
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
KA ++ +LLGACR + + + A KL L+P++ +VLLSNIYA + +W+DV
Sbjct: 1364 PFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVT 1423
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG-YV 572
R++MK + + K PGFS ++++ KVH F+V D+ HPQ IYE +E+L +++E G YV
Sbjct: 1424 DARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYV 1483
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D + DV++EEKE L HSEKLA NLRVCGDCH+ I+ I
Sbjct: 1484 PDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCI 1543
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+ REIV+RD+ RFH+F++G CSCGDYW
Sbjct: 1544 SKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 228/473 (48%), Gaps = 25/473 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDK-NNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
S V +N +H+ + D+ +N+F+WN + + G V A+ F ++ + +
Sbjct: 830 SDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRST 889
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
+ T + + DL G+Q H F V VS++L++MYSK G + A
Sbjct: 890 IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
K F P+ +++SW +M++ Y QN+ EA+ F++ L D + D
Sbjct: 950 KTFINSPE--LDLISWNTMISSYAQNNLEMEAICTFRDLL------------RDGLKPDQ 995
Query: 189 VAIASVLSACSRVTVN---GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+ASVL ACS + H + IK G ++ V LID Y++GG +D + +
Sbjct: 996 FTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFL 1055
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
G + D +WN+I+ Y ++ + +AL+ F ++ + + +TL+ + A L
Sbjct: 1056 LHGKYDFDLASWNAIMFGYIKSNKSRKALEHF-SLMHEMGIPIDEITLATAIKASGCLIN 1114
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L+ GK I IK+ + V + ++DMY KCG + A + F ++ + +WT MI+G
Sbjct: 1115 LKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISG 1174
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y + AL +++ M +GV+P+ TF +++ A S +++G + ++
Sbjct: 1175 YIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQ---IHANVVKLDY 1231
Query: 426 GVEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
++H+ +VD+ + G +++AY + M V+ V W ++L H +VD
Sbjct: 1232 SLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVR-KVVFWNAMLLGLAQHGHVD 1283
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 217/490 (44%), Gaps = 69/490 (14%)
Query: 1 MKLSKSSSVSSVVSN--VDKHSTNTNLTTLFNK---------YVDKN---NVFSWNSVIA 46
+KL K + V S D++ TN NL T+++K DK+ ++ +WNS++A
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTN-NLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685
Query: 47 DLARGGDS-----VEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
A+ DS +E R F +R+ + TR T +K C + + H A
Sbjct: 686 AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
GF D+FVS AL+++Y K G + AR LFD++P+ R+ V W ML YV+N EAL
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPE--RDAVLWNVMLKAYVENSFQDEAL 803
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
F F + F D + V+ + N A
Sbjct: 804 RFFSAF------------HRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQ--------- 842
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+ AYA K+F + WN + + G A+D F ++
Sbjct: 843 --------VKAYA--------MKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLL 886
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ST + ++VTL +L A L LG+ IH VIK V V S+++MY K G V
Sbjct: 887 RST-IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVV 945
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
A K F E ++ SW MI+ Y + EA+ F +++ G++P+ T SVL AC
Sbjct: 946 YAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005
Query: 402 SHAGLVQEGWHW-LNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVK 456
S EG ++ L + H + I+ G+ + ++DL + GK+ EA L+ G K
Sbjct: 1006 STG---DEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHG-KYD 1061
Query: 457 ADFVVWGSLL 466
D W +++
Sbjct: 1062 FDLASWNAIM 1071
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 25/211 (11%)
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
+S A+ DL GK+AH + G D ++++ LI MYSKCG L AR++FD+ R +
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDR--D 676
Query: 141 IVSWTSMLTGYVQ-----NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+V+W S+L Y Q +N E LF LL E F S+ ++
Sbjct: 677 LVTWNSILAAYAQFADSSYENVLEGFRLFG--LLRE-------------FGFSITRLTLA 721
Query: 196 SACSRVTVNG---VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK 252
++G V+E HG+ +K GF+ ++ V L++ Y + G V +R +FD M E+
Sbjct: 722 PLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER 781
Query: 253 DAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
DAV WN ++ Y +N EAL F +S
Sbjct: 782 DAVLWNVMLKAYVENSFQDEALRFFSAFHRS 812
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 138/339 (40%), Gaps = 58/339 (17%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
N LF + + + + +W ++I+ GD AL + MR + P TF IK+
Sbjct: 1151 PNALELFGE-ISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKA 1209
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
S L L GKQ H + D FV ++L+DMY KCG + DA ++F ++ +R +V
Sbjct: 1210 SSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM--DVRKVV 1267
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
W +ML G Q+ + EAL LF+ S+ + D V VLSACS
Sbjct: 1268 FWNAMLLGLAQHGHVDEALNLFRTM------------QSNGIQPDKVTFIGVLSACSH-- 1313
Query: 203 VNGVTEGAHGF----VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+G+ A+ + G E+ + L+DA R G + + V
Sbjct: 1314 -SGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENV------------- 1359
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
+ S K +A A+L A G K + D+++
Sbjct: 1360 ----------------------IASMPFKASASMYRALLGACRTKGDAETAKRVADKLLA 1397
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
+D +S + ++Y Q D A N MK KNV+
Sbjct: 1398 LDPSDSSAY-VLLSNIYAASRQWDDVTDARNMMKLKNVK 1435
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/630 (36%), Positives = 365/630 (57%), Gaps = 37/630 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD---LHSGK 93
++ SWN++I+ A+ +EA+ F + + L P + T +++CS + G
Sbjct: 959 DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGS 1018
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H A G D FVS+ALID+YSK G++ +A L + ++ SW +++ GY++
Sbjct: 1019 QVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHG--KYDFDLASWNAIMFGYIK 1076
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
++ +R+AL F L+ E + +D + +A+ + A + + +
Sbjct: 1077 SNKSRKALEHFS--LMHEM----------GIPIDEITLATAIKASGCLINLKQGKQIQAY 1124
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
IK GF++++ V + ++D Y + G + + ++F + D V W ++I+ Y +NG A
Sbjct: 1125 AIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHA 1184
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L V+ +++ + V+ + T + ++ A + L L GK IH V+K+D VGTS++D
Sbjct: 1185 LSVY-HLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVD 1243
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MYCKCG V A + F +M + V W AM+ G H EAL+LF M G++P+ +T
Sbjct: 1244 MYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVT 1303
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
F+ VLSACSH+GL E + + + M + I P +EHY C+VD LGRAG+++EA ++I M
Sbjct: 1304 FIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASM 1363
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
KA ++ +LLGACR + + + A KL L+P++ +VLLSNIYA + +W+DV
Sbjct: 1364 PFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVT 1423
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG-YV 572
R++MK + + K PGFS ++++ KVH F+V D+ HPQ IYE +E+L +++E G YV
Sbjct: 1424 DARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYV 1483
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D + DV++EEKE L HSEKLA NLRVCGDCH+ I+ I
Sbjct: 1484 PDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCI 1543
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+ REIV+RD+ RFH+F++G CSCGDYW
Sbjct: 1544 SKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 228/473 (48%), Gaps = 25/473 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDK-NNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
S V +N +H+ + D+ +N+F+WN + + G V A+ F ++ + +
Sbjct: 830 SDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRST 889
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
+ T + + DL G+Q H F V VS++L++MYSK G + A
Sbjct: 890 IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
K F P+ +++SW +M++ Y QN+ EA+ F++ L D + D
Sbjct: 950 KTFINSPE--LDLISWNTMISSYAQNNLEMEAICTFRDLL------------RDGLKPDQ 995
Query: 189 VAIASVLSACSRVTVN---GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+ASVL ACS + H + IK G ++ V LID Y++GG +D + +
Sbjct: 996 FTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFL 1055
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
G + D +WN+I+ Y ++ + +AL+ F ++ + + +TL+ + A L
Sbjct: 1056 LHGKYDFDLASWNAIMFGYIKSNKSRKALEHF-SLMHEMGIPIDEITLATAIKASGCLIN 1114
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L+ GK I IK+ + V + ++DMY KCG + A + F ++ + +WT MI+G
Sbjct: 1115 LKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISG 1174
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y + AL +++ M +GV+P+ TF +++ A S +++G + ++
Sbjct: 1175 YIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQ---IHANVVKLDY 1231
Query: 426 GVEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
++H+ +VD+ + G +++AY + M V+ V W ++L H +VD
Sbjct: 1232 SLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVR-KVVFWNAMLLGLAQHGHVD 1283
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 216/490 (44%), Gaps = 69/490 (14%)
Query: 1 MKLSKSSSVSSVVSN--VDKHSTNTNLTTLFNK---------YVDKN---NVFSWNSVIA 46
+KL K + V S D++ TN NL T+++K DK+ ++ +WNS++A
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTN-NLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685
Query: 47 DLARGGDS-----VEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
A+ DS +E R F +R+ + TR T +K C + + H A
Sbjct: 686 AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
GF D+FVS AL+++Y K G + AR LFD++P+ R+ V W ML YV+N EAL
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPE--RDAVLWNVMLKAYVENSFQDEAL 803
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
F F + D + V+ + N A
Sbjct: 804 RFFSAF------------HRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQ--------- 842
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+ AYA K+F + WN + + G A+D F ++
Sbjct: 843 --------VKAYA--------MKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLL 886
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ST + ++VTL +L A L LG+ IH VIK V V S+++MY K G V
Sbjct: 887 RST-IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVV 945
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
A K F E ++ SW MI+ Y + EA+ F +++ G++P+ T SVL AC
Sbjct: 946 YAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005
Query: 402 SHAGLVQEGWHW-LNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVK 456
S EG ++ L + H + I+ G+ + ++DL + GK+ EA L+ G K
Sbjct: 1006 STG---DEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHG-KYD 1061
Query: 457 ADFVVWGSLL 466
D W +++
Sbjct: 1062 FDLASWNAIM 1071
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 25/211 (11%)
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
+S A+ DL GK+AH + G D ++++ LI MYSKCG L AR++FD+ R +
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDR--D 676
Query: 141 IVSWTSMLTGYVQ-----NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+V+W S+L Y Q +N E LF LL E F S+ ++
Sbjct: 677 LVTWNSILAAYAQFADSSYENVLEGFRLFG--LLRE-------------FGFSITRLTLA 721
Query: 196 SACSRVTVNG---VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK 252
++G V+E HG+ +K GF+ ++ V L++ Y + G V +R +FD M E+
Sbjct: 722 PLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER 781
Query: 253 DAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
DAV WN ++ Y +N EAL F +S
Sbjct: 782 DAVLWNVMLKAYVENSFQDEALRFFSAFHRS 812
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 138/339 (40%), Gaps = 58/339 (17%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
N LF + + + + +W ++I+ GD AL + MR + P TF IK+
Sbjct: 1151 PNALELFGE-ISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKA 1209
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
S L L GKQ H + D FV ++L+DMY KCG + DA ++F ++ +R +V
Sbjct: 1210 SSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM--DVRKVV 1267
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
W +ML G Q+ + EAL LF+ S+ + D V VLSACS
Sbjct: 1268 FWNAMLLGLAQHGHVDEALNLFRTM------------QSNGIQPDKVTFIGVLSACSH-- 1313
Query: 203 VNGVTEGAHGF----VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+G+ A+ + G E+ + L+DA R G + + V
Sbjct: 1314 -SGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENV------------- 1359
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
+ S K +A A+L A G K + D+++
Sbjct: 1360 ----------------------IASMPFKASASMYRALLGACRTKGDAETAKRVADKLLA 1397
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
+D +S + ++Y Q D A N MK KNV+
Sbjct: 1398 LDPSDSSAY-VLLSNIYAASRQWDDVTDARNMMKLKNVK 1435
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/655 (36%), Positives = 368/655 (56%), Gaps = 53/655 (8%)
Query: 16 VDKHSTNTNLTT---LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPT 72
+D + N +L + +F+ ++K V W +I+ +G + EA+ F + P
Sbjct: 195 IDMLARNGDLASARKVFDGLIEKT-VVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPD 253
Query: 73 RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC--GELSD-ARK 129
R T I +C+ L + G Q H A G D VS L+DMY+K G+ D A K
Sbjct: 254 RYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANK 313
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQND-NAREALLLFKEFLLEESECGGASENSDNVFVDS 188
+F+ +P+ +++SWT++++GYVQ+ + + LF E L ++++ +
Sbjct: 314 VFERMPK--NDVISWTALISGYVQSGVQENKVMALFGEML------------NESIKPNH 359
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
+ +S+L +C+ ++ + H VIK S VGN L+ YA G ++ +R+VF+
Sbjct: 360 ITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQ 419
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDV-FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ E+ + E D D + DV ++ T ++++ A A +G+L
Sbjct: 420 LYERSMIP------------CITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLT 467
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
G+ +H +K V S++ MY +CG ++ A ++FN++K++NV SWT+MI+G
Sbjct: 468 KGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLA 527
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
H A AL LF+ MI GV+PN +T+++VLSACSH GLV+EG + +M + + P +
Sbjct: 528 KHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRM 587
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
EHY CMVDLL R+G +KEA + I M +KAD +VW +LLGACR H N+++GEI AK + E
Sbjct: 588 EHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVE 647
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
LEP + +VLLSN+YA+AG W++V R RS M++ L K G S +E+ H F GD
Sbjct: 648 LEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDT 707
Query: 548 EHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------- 599
HP+ + IY L+ L +++ +GYV D + V+HD+ E KE L HSEK+A
Sbjct: 708 SHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITT 767
Query: 600 ----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH+ I+ +SK REI++RDS RFH KDG CSCG+YW
Sbjct: 768 SAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 175/321 (54%), Gaps = 19/321 (5%)
Query: 88 DLHSGKQAHQQAFIFG--FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
DL G+ H++ + G RD V+++L+ +YS+CG ++ AR +FD + + +R+IVSWT
Sbjct: 63 DLRLGRALHRR-LLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGM-RGLRDIVSWT 120
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M + +N R +LLL E L ES G N+ + + A C V
Sbjct: 121 AMASCLARNGAERGSLLLIGEML--ES---GLLPNAYTLCAAAHACFPHELYCLVGGVVL 175
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
G + ++V VG+ LID AR G + +RKVFDG+IEK V W +I+ Y
Sbjct: 176 GLVHKMGL-----WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYV 230
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q A EA+++F ++ + + T+S+++ A LG +RLG +H ++M L
Sbjct: 231 QGECAEEAVELFLDFLED-GFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDA 289
Query: 326 IVGTSIIDMYCKC--GQ-VDLARKAFNQMKEKNVRSWTAMIAGYGMH-CRAREALDLFYK 381
V ++DMY K GQ +D A K F +M + +V SWTA+I+GY + + + LF +
Sbjct: 290 CVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGE 349
Query: 382 MIKAGVRPNYITFVSVLSACS 402
M+ ++PN+IT+ S+L +C+
Sbjct: 350 MLNESIKPNHITYSSILKSCA 370
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 234/489 (47%), Gaps = 51/489 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ ++ SW ++ + LAR G +L M + L P T A +C H
Sbjct: 106 VFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFP-H 164
Query: 88 DLH------SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI 141
+L+ H+ + DV V SALIDM ++ G+L+ ARK+FD + ++ +
Sbjct: 165 ELYCLVGGVVLGLVHKMGL---WGTDVAVGSALIDMLARNGDLASARKVFDGLIEK--TV 219
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
V WT +++ YVQ + A EA+ LF +FL D D ++S++SAC+ +
Sbjct: 220 VVWTLLISRYVQGECAEEAVELFLDFL------------EDGFEPDRYTMSSMISACTEL 267
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR---GGHVDVSRKVFDGMIEKDAVTWN 258
+ H ++ G S+ V L+D YA+ G +D + KVF+ M + D ++W
Sbjct: 268 GSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWT 327
Query: 259 SIIAIYAQNGLAA-EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
++I+ Y Q+G+ + + +F +M+ + +K N +T S++L + A + G+ +H VI
Sbjct: 328 ALISGYVQSGVQENKVMALFGEMLNES-IKPNHITYSSILKSCASISDHDSGRQVHAHVI 386
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
K + + VG +++ MY + G ++ AR+ FNQ+ E RS I R+
Sbjct: 387 KSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYE---RSMIPCIT------EGRD-FP 436
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCM 433
L +++++ V + TF S++SA + G++ +G H +++ G +
Sbjct: 437 LDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQL-----HAMSLKAGFGSDRFVSNSL 491
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD--LGEIAAKKLFELEPN 491
V + R G L++A +K + + + W S++ H + L L ++PN
Sbjct: 492 VSMYSRCGYLEDACRSFNELKDR-NVISWTSMISGLAKHGYAERALSLFHDMILTGVKPN 550
Query: 492 NCGYHVLLS 500
+ Y +LS
Sbjct: 551 DVTYIAVLS 559
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/658 (35%), Positives = 367/658 (55%), Gaps = 59/658 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL---------- 86
+V SW ++I+ + G EA AF MR + + S AL
Sbjct: 119 DVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGS 178
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ L G H +GF + ++++ MYS C ++ A ++F+ IP R++VSW S
Sbjct: 179 NCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNS 238
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+++G+ N A AL F++ + SE + V + V + ++L +C+ +
Sbjct: 239 LISGFXLNGEAERALRTFEDMV---------SEGTSAVEPNRVTVIALLKSCAELGCVET 289
Query: 207 TEGAHGFVIKRG----FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ H ++ R +V V L+D +AR G++ ++R++FDG+ K+ V W+++IA
Sbjct: 290 SSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIA 349
Query: 263 IYAQNGLAAEALDVFDQMVK-----STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
Y Q EAL +F QM+ +VK NAVTL +V+ A + LG R IH +
Sbjct: 350 GYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAV 409
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE--KNVRSWTAMIAGYGMHCRAREA 375
L++ + +++IDM KCG ++ R+ F++M E + V SW++MI G+H + A
Sbjct: 410 ATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRA 469
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
L+LF +M G PN IT++SVLSACSHAGLV++G N+M ++ + P +HY C+VD
Sbjct: 470 LELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVD 529
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY 495
LLGRAG L EA+++I M +KAD +WGSLL AC +H N LGEI KK+ L+ N+ G+
Sbjct: 530 LLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGH 589
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
HVLL+N+Y +AGRW+DV R R ++ L K PG S +E+ +V++F+ D+ HP+ E I
Sbjct: 590 HVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMI 649
Query: 556 YEYLEELNVKLQEVG-YVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------------- 599
Y+ L+ L+ ++++ YVT+ + D D + HSE+LA
Sbjct: 650 YKELDGLDERVRKAAKYVTETGLNVEDGDIAGLIXRCKYHSERLAIAFGLIMIDRHSTCS 709
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH +L+SKV+DRE++VRD+ RFH+F+DG CSCGDYW
Sbjct: 710 CSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/499 (31%), Positives = 256/499 (51%), Gaps = 49/499 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + F WNS+IA A AL F+ M+ ++ TFP +K+C+AL L
Sbjct: 13 ISHKDTFHWNSLIAKNATQNPQT-ALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H G D F ++AL+D Y KCG A ++FDE+P+ ++VSWT++++ Y
Sbjct: 72 LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131
Query: 153 QNDNAREALLLFKEFL----LEESECGGASENSDNVFVDSVAIASVLSACS-RVTVNGVT 207
N EA F + SEC G VD V++ +++SAC+ N +
Sbjct: 132 SNGCVDEAFXAFGRMRWMRGWDGSECCG---------VDVVSLGALVSACAVGCGSNCLR 182
Query: 208 EGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI--EKDAVTWNSIIAI 263
G+ HG V+K GF +GN+++ Y+ V + +VF+G+ ++D V+WNS+I+
Sbjct: 183 RGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISG 242
Query: 264 YAQNGLAAEALDVFDQMVK--STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV----I 317
+ NG A AL F+ MV ++ V+ N VT+ A+L + A LG + +H+ +
Sbjct: 243 FXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHS 302
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ + + V+V T+++DM+ +CG + LAR+ F+ ++ KNV W+AMIAGY EAL
Sbjct: 303 SLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALR 362
Query: 378 LFYKMIKAG------VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH-- 429
LF +M+ G V+PN +T VSV++ACS G + +M H++ + G++
Sbjct: 363 LFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSA-----SMIHKYAVATGLDQDA 417
Query: 430 --YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV-WGSLLGACRIHKNVDLGEIAAKKLF 486
++D+ + G ++ + M VV W S++GA IH G+ A +
Sbjct: 418 RIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGE---GKRALELFS 474
Query: 487 EL-----EPNNCGYHVLLS 500
E+ EPN Y +LS
Sbjct: 475 EMRTGGYEPNEITYISVLS 493
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/646 (37%), Positives = 369/646 (57%), Gaps = 43/646 (6%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-----SLTPTRSTFP 77
TN +F K + NV SWN+++ + GD+ F +R++ + T
Sbjct: 344 TNAQMIF-KMNNNKNVVSWNTMVGGFSAEGDTHGT---FDVLRQMLAGGEDVKADEVTIL 399
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
A+ C L S K+ H + F + V++A + Y+KCG LS A+++F I R
Sbjct: 400 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI--R 457
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ + SW +++ G+ Q+++ R +L + + + DS + S+LSA
Sbjct: 458 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS------------GLLPDSFTVCSLLSA 505
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
CS++ + + HGF+I+ + ++ V +++ Y G + + +FD M +K V+W
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N++I Y QNG AL VF QMV C +++ V A + L LRLG+ H +
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLC-GISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
K LE+ + S+IDMY K G + + K FN +KEK+ SW AMI GYG+H A+EA+
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 684
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
LF +M + G P+ +TF+ VL+AC+H+GL+ EG +L+ M F ++P ++HY C++D+L
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 744
Query: 438 GRAGKLKEAYDLI-EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYH 496
GRAG+L +A ++ E M +AD +W SLL +CRIH+N+++GE A KLFELEP +
Sbjct: 745 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENY 804
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
VLLSN+YA G+WEDV + R M L K G S +EL KV +F+VG++ E+I
Sbjct: 805 VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIK 864
Query: 557 EYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------------- 599
L +K+ ++GY D SV HD+ +EEK LR HSEKLA
Sbjct: 865 SLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVY 924
Query: 600 -NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH +LISKV++REIVVRD+KRFH+FK+G+CSCGDYW
Sbjct: 925 KNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 216/437 (49%), Gaps = 24/437 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGKQA 95
N+F WN+VI+ +R E L F M + L P T+PC IK+C+ + D+ G
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H G DVFV +AL+ Y G ++DA +LFD +P+ RN+VSW SM+ + N
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE--RNLVSWNSMIRVFSDNG 267
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVA-IASVLSACSRVTVNGVTEGAHGFV 214
+ E+ LL E + EN D F+ VA + +VL C+R G+ +G HG+
Sbjct: 268 FSEESFLLLGEMM---------EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA 318
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+K D E+ + N L+D Y++ G + ++ +F K+ V+WN+++ ++ G
Sbjct: 319 VKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTF 378
Query: 275 DVFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
DV QM+ DVK + VT+ + H L K +H +K + + +V + +
Sbjct: 379 DVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVA 438
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
Y KCG + A++ F+ ++ K V SW A+I G+ R +LD +M +G+ P+ T
Sbjct: 439 SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFT 498
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDL 449
S+LSACS ++ L H F I +E Y ++ L G+L L
Sbjct: 499 VCSLLSACSKLKSLR-----LGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 450 IEGMKVKADFVVWGSLL 466
+ M+ K+ V W +++
Sbjct: 554 FDAMEDKS-LVSWNTVI 569
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 236/486 (48%), Gaps = 32/486 (6%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-- 67
+++VS H T+ LF+ + + N+ SWNS+I + G S E+ M +
Sbjct: 226 NALVSFYGTHGFVTDALQLFD-IMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENG 284
Query: 68 --SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
+ P +T + C+ ++ GK H A +++ +++AL+DMYSKCG ++
Sbjct: 285 DGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCIT 344
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
+A+ +F +N+VSW +M+ G+ + + ++ L GG ++V
Sbjct: 345 NAQMIFKM--NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML-----AGG-----EDVK 392
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
D V I + + C + + H + +K+ F V N + +YA+ G + +++V
Sbjct: 393 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 452
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F G+ K +WN++I +AQ+ +LD QM K + + ++ T+ ++L A + L
Sbjct: 453 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACSKLKS 511
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
LRLGK +H +I+ LE + V S++ +Y CG++ + F+ M++K++ SW +I G
Sbjct: 512 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITG 571
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y + AL +F +M+ G++ I+ + V ACS ++ L H + ++
Sbjct: 572 YLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR-----LGREAHAYALKH 626
Query: 426 GVE---HYGC-MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
+E C ++D+ + G + ++ + G+K K+ W +++ IH
Sbjct: 627 LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST-ASWNAMIMGYGIHGLAK----E 681
Query: 482 AKKLFE 487
A KLFE
Sbjct: 682 AIKLFE 687
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 168/343 (48%), Gaps = 23/343 (6%)
Query: 73 RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHR---DVFVSSALIDMYSKCGELSDARK 129
R +++ D+ G++ HQ + G R D + + +I MY+ CG D+R
Sbjct: 84 REALGLLLQASGKRKDIEMGRKIHQ--LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF 141
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FD + R +N+ W ++++ Y +N+ E L F E + ++ ++ D
Sbjct: 142 VFDAL--RSKNLFQWNAVISSYSRNELYDEVLETFIEMI-----------STTDLLPDHF 188
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
V+ AC+ ++ G+ HG V+K G +V VGN L+ Y G V + ++FD M
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD---VKCNAVTLSAVLLAIAHLGVL 306
E++ V+WNS+I +++ NG + E+ + +M++ + TL VL A +
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
LGK +H +K+ L++ +++ +++DMY KCG + A+ F KNV SW M+ G+
Sbjct: 309 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 368
Query: 367 GMHCRAREALDLFYKMIKAG--VRPNYITFVSVLSACSHAGLV 407
D+ +M+ G V+ + +T ++ + C H +
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 16/249 (6%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
+I YA G D SR VFD + K+ WN++I+ Y++N L E L+ F +M+ +TD+
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+ T V+ A A + + +G +H V+K L E V VG +++ Y G V A + F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK----AGVRPNYITFVSVLSACSHA 404
+ M E+N+ SW +MI + + + E+ L +M++ P+ T V+VL C+
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 405 -----GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
G GW + E + ++D+ + G + A +I M +
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLN------NALMDMYSKCGCITNA-QMIFKMNNNKNV 358
Query: 460 VVWGSLLGA 468
V W +++G
Sbjct: 359 VSWNTMVGG 367
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/626 (37%), Positives = 362/626 (57%), Gaps = 40/626 (6%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
W +I+ + G EAL F+ M++ + P + T + +C+ L + G+ H
Sbjct: 269 PWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVH--G 326
Query: 100 FIFGFHRDV---FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
F+ D F+ AL+++Y+ G L D K+F+ I ++ I+SW ++++ + +N
Sbjct: 327 FVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEK--TILSWNTLISIFTRNGQ 384
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EALLLF + + + DS ++AS LSAC ++ + + HG++IK
Sbjct: 385 PEEALLLFVQM------------QTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIK 432
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G ++ V N LID YA+ G V + K+F+ + EK VTWNS+I ++QNG + EA+ +
Sbjct: 433 TGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITL 491
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
FDQM + VK + +T +V+ A +HLG L GK +H ++I L + + T++ DMY
Sbjct: 492 FDQMYMNC-VKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYS 550
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG++ +A F++M E+++ SW+ MIAGYGMH + + LF +M+ +G++PN ITF+
Sbjct: 551 KCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMH 610
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+LSACSHAG V+EG + N+M EF +EP +H+ CMVDLL RAG L AY +I +
Sbjct: 611 ILSACSHAGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFP 669
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
A+ +WG+LL CRIHK +D+ + K L +++ + GY+ LLSNIYA G W+ + R
Sbjct: 670 ANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVR 729
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
S+MK++ L K PG+S +E+ K++ F GD H Q + IY +LE + Y ++
Sbjct: 730 SMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPD 789
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
+ I + KE + HSEKLA NLRVC DCH+ ++ SK+
Sbjct: 790 NSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKIT 849
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
REI++RD RFH F++G CSC DYW
Sbjct: 850 GREIIMRDLNRFHCFRNGSCSCNDYW 875
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 250/481 (51%), Gaps = 36/481 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V +W+S++ + + G + E L FS M ++ P T ++CS L L G+ H
Sbjct: 165 DVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVH 224
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+ ++++LI MY K G+L A +LF+ +P R+ WT M++ Y Q+
Sbjct: 225 GYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRM--TAPWTPMISCYNQSGC 282
Query: 157 AREALLLF---KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+EAL +F +EF +E ++ V + VL AC+R+ HGF
Sbjct: 283 FQEALNVFAKMQEFKMEPNQ---------------VTMVGVLCACARLGRVKEGRSVHGF 327
Query: 214 VIKRGFDSEVG-VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
VI+R D E+ +G L++ YA G++ KVF+ + EK ++WN++I+I+ +NG E
Sbjct: 328 VIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEE 387
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL +F QM ++ + ++ +L++ L A + +LG IH +IK + V ++I
Sbjct: 388 ALLLFVQM-QTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALI 445
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG V A K F ++KEK++ +W +MI G+ + + EA+ LF +M V+ + +
Sbjct: 446 DMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKL 505
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+SV+ ACSH G +++G W++ + + + D+ + G+L+ A+ + +
Sbjct: 506 TFLSVIQACSHLGYLEKG-KWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDR 564
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGY-HVLLSNIYAN 505
M ++ V W ++ +H ++ A LF ++PN+ + H+L + +A
Sbjct: 565 MSERS-IVSWSVMIAGYGMHGQIN----ATISLFNQMLGSGIKPNDITFMHILSACSHAG 619
Query: 506 A 506
A
Sbjct: 620 A 620
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/461 (29%), Positives = 226/461 (49%), Gaps = 24/461 (5%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS-TFPCAIKSCSALHDLHSGK 93
K + F W +I GG EA+ + M T + FP +K+CS DL G
Sbjct: 61 KPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGG 120
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
+ H + GF D V ++L+ MY + L DA K FD +P IR++V+W+S++ +VQ
Sbjct: 121 KVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMP--IRDVVAWSSIVLNFVQ 178
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N A E L +F + + E E DSV + SV ACS + + HG+
Sbjct: 179 NGQASEGLDMFSQMISEAVE------------PDSVTMLSVTEACSELGSLRLGRSVHGY 226
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V++R +S + N+LI Y + G + + ++F+ + + W +I+ Y Q+G EA
Sbjct: 227 VVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEA 286
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV-IVGTSII 332
L+VF +M + ++ N VT+ VL A A LG ++ G+ +H VI+ ++ + +G +++
Sbjct: 287 LNVFAKM-QEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALM 345
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
++Y G + K F +KEK + SW +I+ + + + EAL LF +M G+ P+
Sbjct: 346 ELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSY 405
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
+ S LSAC Q G + N V++ ++D+ + G + A + E
Sbjct: 406 SLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANKMFEK 463
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
+K K+ V W S++ C +N + A LF+ NC
Sbjct: 464 IKEKS-LVTWNSMI--CGFSQNGY--SVEAITLFDQMYMNC 499
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 193/378 (51%), Gaps = 25/378 (6%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H FI G HR S+ LI+ Y++ G ++++FD P+ + W ++ YV
Sbjct: 19 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKP--DSFMWGVLIKCYVW 76
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
EA+ L+ E + + D + + SVL ACS V HG
Sbjct: 77 GGFFEEAVSLYHEMVYQ-----------DQTQISNFVFPSVLKACSGFGDLSVGGKVHGR 125
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
VIK GF+S+ V +L+ Y +D + K FD M +D V W+SI+ + QNG A+E
Sbjct: 126 VIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEG 185
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
LD+F QM+ S V+ ++VT+ +V A + LG LRLG+ +H V++ ++E + + S+I
Sbjct: 186 LDMFSQMI-SEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIV 244
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY K G + A + F + + WT MI+ Y +EAL++F KM + + PN +T
Sbjct: 245 MYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVT 304
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNI----EPGVEHYG-CMVDLLGRAGKLKEAYD 448
V VL AC+ G V+EG H F I +P ++ G +++L G L++ +
Sbjct: 305 MVGVLCACARLGRVKEG-----RSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHK 359
Query: 449 LIEGMKVKADFVVWGSLL 466
+ E +K K + W +L+
Sbjct: 360 VFETIKEKT-ILSWNTLI 376
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 168/347 (48%), Gaps = 21/347 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + SWN++I+ R G EAL F M+ L P + ++ +C + G
Sbjct: 364 IKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLG 423
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H G D FV +ALIDMY+KCG + A K+F++I + +++V+W SM+ G+
Sbjct: 424 AQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKE--KSLVTWNSMICGFS 480
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN + EA+ LF + + + V +D + SV+ ACS + + H
Sbjct: 481 QNGYSVEAITLFDQMYM------------NCVKMDKLTFLSVIQACSHLGYLEKGKWVHH 528
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+I G + + L D Y++ G + ++ VFD M E+ V+W+ +IA Y +G
Sbjct: 529 KLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINA 588
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
+ +F+QM+ S +K N +T +L A +H G + GK + + + +E ++
Sbjct: 589 TISLFNQMLGS-GIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMV 647
Query: 333 DMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
D+ + G ++ A + + N W A++ G CR + +D+
Sbjct: 648 DLLSRAGDLNGAYQIITSLPFPANSSIWGALLNG----CRIHKRIDI 690
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 147/314 (46%), Gaps = 16/314 (5%)
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
AH F+ G LI++YA+ G + S++VFD + D+ W +I Y G
Sbjct: 22 AHLFIT--GLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGF 79
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EA+ ++ +MV + + +VL A + G L +G +H +VIK E +V T
Sbjct: 80 FEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVET 139
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
S++ MY + +D A KAF+ M ++V +W++++ + + +A E LD+F +MI V P
Sbjct: 140 SLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEP 199
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGH--EFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+ +T +SV ACS G ++ G + G+ IE ++ + G+ G L A
Sbjct: 200 DSVTMLSVTEACSELGSLRLG---RSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAE 256
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNV---DLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
L E + + W ++ +C L A + F++EPN V + +
Sbjct: 257 RLFENVPCRMT-APWTPMI-SCYNQSGCFQEALNVFAKMQEFKMEPN----QVTMVGVLC 310
Query: 505 NAGRWEDVERTRSL 518
R V+ RS+
Sbjct: 311 ACARLGRVKEGRSV 324
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 122/246 (49%), Gaps = 24/246 (9%)
Query: 19 HSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC 78
HS N +F K +K+ V +WNS+I ++ G SVEA+ F M + + TF
Sbjct: 455 HSANK----MFEKIKEKSLV-TWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLS 509
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
I++CS L L GK H + ++G +D ++ +AL DMYSKCGEL A +FD + +
Sbjct: 510 VIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSE-- 567
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
R+IVSW+ M+ GY + + LF + L G + +D F+ +LSAC
Sbjct: 568 RSIVSWSVMIAGYGMHGQINATISLFNQML------GSGIKPNDITFMH------ILSAC 615
Query: 199 SRVTVNGVTEGAHGF--VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAV 255
S V EG F + + G + + ++D +R G ++ + ++ + ++
Sbjct: 616 SH--AGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSS 673
Query: 256 TWNSII 261
W +++
Sbjct: 674 IWGALL 679
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/663 (36%), Positives = 365/663 (55%), Gaps = 74/663 (11%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + + +V SWN VI+ L++ G EAL M + P +T+ ++ +C+ L L
Sbjct: 249 KSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLE 308
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
GKQ H Q H D +V+SA++++Y+KCG +A+++F + R RN VSWT ++ G
Sbjct: 309 WGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSL--RDRNSVSWTVLIGG 366
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
++Q E++ LF + ++ + VD A+A+++S C +
Sbjct: 367 FLQYGCFSESVELFNQM------------RAELMAVDQFALATLISGCCNTMDICLGSQL 414
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHV-------------DV---------------- 241
H +K G V V N+LI YA+ G++ D+
Sbjct: 415 HSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNI 474
Query: 242 --SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+R+ FD M ++ +TWN+++ Y Q+G + L ++ M+ DV + VT +
Sbjct: 475 AKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRG 534
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A +G +LG I +K+ L V ++I MY KCG++ ARKAF+ + K++ SW
Sbjct: 535 CADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSW 594
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
AMI GY H ++A+++F ++ G +P+YI++V+VLS CSH+GLV+EG + + M
Sbjct: 595 NAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKR 654
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
+ NI PG+EH+ CMVDLLGRAG L EA +LI+ M +K VWG+LL AC+ H N DL E
Sbjct: 655 DHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAE 714
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
+AAK LF+L+ G ++LL+ +YA+AG+ +D + R LM+++ + K+PG+S +E+ +V
Sbjct: 715 LAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRV 774
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
H F D HPQ I E L+EL K+ +GYV + E + HSEKLA
Sbjct: 775 HVFKAEDVSHPQVIAIREKLDELMEKIAHLGYV-----------RTESPRSEIHHSEKLA 823
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLR+C DCHTVI+LIS V DRE V+RD RFH+FK G CSC
Sbjct: 824 VAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREFVIRDGVRFHHFKGGSCSCM 883
Query: 642 DYW 644
DYW
Sbjct: 884 DYW 886
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 221/498 (44%), Gaps = 72/498 (14%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSAL 86
LF + + +V SWN++++ + G + AL F SMR+ + P TF C +KSC AL
Sbjct: 114 LFGR-MPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGAL 172
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN--IVSW 144
Q F D V +AL+DM +CG + A K F RI+N I+
Sbjct: 173 GWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQF----SRIKNPTIICR 228
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEE-----------SECGGASENSDNVF-------- 185
SML GY ++ AL +FK + S+ G E D V
Sbjct: 229 NSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVR 288
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
DS S L+AC+R++ + H VI+ + V + +++ YA+ G +++V
Sbjct: 289 PDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRV 348
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F + ++++V+W +I + Q G +E++++F+QM ++ + + L+ ++ +
Sbjct: 349 FSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQM-RAELMAVDQFALATLISGCCNTMD 407
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
+ LG +H +K +V+V S+I MY KCG + A FN M E+++ SWT MI
Sbjct: 408 ICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITA 467
Query: 366 Y---GMHCRAREALD----------------------------LFYKMI-KAGVRPNYIT 393
Y G +ARE D ++ M+ + V P+++T
Sbjct: 468 YSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVT 527
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNI-----EPGVEHYGCMVDLLGRAGKLKEAYD 448
+V++ C+ G + G +GH + V M GR + ++A+D
Sbjct: 528 YVTLFRGCADIGANKLG---DQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFD 584
Query: 449 LIEGMKVKADFVVWGSLL 466
+ + D V W +++
Sbjct: 585 FLS----RKDLVSWNAMI 598
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 191/446 (42%), Gaps = 65/446 (14%)
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLF-DEIPQR 137
A++SC A L + H + G VF+ + L+ Y CG LSDAR L DEI +
Sbjct: 31 ALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITE- 89
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEF----------LLEESECGGASENSDNVFV- 186
N+++ M+ GY + + +A+ LF ++ G N+ ++FV
Sbjct: 90 -PNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVS 148
Query: 187 ---------DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
++ V+ +C + + V G + K + V L+D R G
Sbjct: 149 MRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCG 208
Query: 238 HVDVSRK-------------------------------VFDGMIEKDAVTWNSIIAIYAQ 266
+D + K +F M E+D V+WN +I+ ++
Sbjct: 209 AMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSK 268
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
+G EALD+ M V+ ++ T ++ L A A L L GK +H QVI+
Sbjct: 269 SGRVREALDMVVDM-HGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPY 327
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V ++++++Y KCG A++ F+ ++++N SWT +I G+ + E+++LF +M
Sbjct: 328 VASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAEL 387
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRAGK 442
+ + +++S C + + L + H ++ G V ++ + + G
Sbjct: 388 MAVDQFALATLISGCCNTMDI-----CLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGN 442
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGA 468
L+ A +LI + D V W ++ A
Sbjct: 443 LQNA-ELIFNFMAERDIVSWTGMITA 467
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/649 (36%), Positives = 359/649 (55%), Gaps = 68/649 (10%)
Query: 45 IADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF 104
+L G +A FSS + S F ++SC + + L GKQ H G
Sbjct: 28 FTNLCSKGHLKQAFDRFSS----HIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGC 83
Query: 105 HRDVFVSSALIDMYSKCGELS-------------------------------DARKLFDE 133
D F+S+ L+++YSKCG+L ARK+FDE
Sbjct: 84 SSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDE 143
Query: 134 IPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
+P+ RN+ +W +M+ G +Q + E L LF N D A+ S
Sbjct: 144 MPE--RNVATWNAMVAGLIQFEFNEEGLGLFSRM------------NELGFLPDEFALGS 189
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
VL C+ + HG+V K GF+ + V ++L Y + G + ++ M ++
Sbjct: 190 VLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQN 249
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V WN++IA AQNG E LD ++ M+K + + +T +V+ + + L L G+ IH
Sbjct: 250 VVAWNTLIAGRAQNGYPEEVLDQYN-MMKMAGFRPDKITFVSVISSCSELATLGQGQQIH 308
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+VIK V V +S+I MY +CG ++ + K F + + +V W++MIA YG H R
Sbjct: 309 AEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGV 368
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
EA+DLF +M + + N +TF+S+L ACSH GL ++G + + M ++ ++P +EHY CM
Sbjct: 369 EAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCM 428
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
VDLLGR G ++EA LI M VKAD + W +LL AC+IHK ++ ++++F L+P +
Sbjct: 429 VDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDP 488
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
+VLLSNI+A+ RW+DV R M++R+L K PG S +E++ ++H F +GDK HP+
Sbjct: 489 VPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSV 548
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------- 599
+I YL EL ++++ GYV D+ SV+HD+D E+KE +L HSEKLA
Sbjct: 549 EIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPI 608
Query: 600 ----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH I+ IS++ +REI+VRDS RFH+FK+G CSCGDYW
Sbjct: 609 RVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 166/345 (48%), Gaps = 17/345 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV +WN+++A L + + E L FS M +L P ++ C+ L L +G
Sbjct: 144 MPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAG 203
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H GF ++ V S+L MY KCG L + +L +P +N+V+W +++ G
Sbjct: 204 RQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPS--QNVVAWNTLIAGRA 261
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN E L + + D + SV+S+CS + G + H
Sbjct: 262 QNGYPEEVLDQYNMMKMA------------GFRPDKITFVSVISSCSELATLGQGQQIHA 309
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
VIK G V V ++LI Y+R G ++ S KVF D V W+S+IA Y +G E
Sbjct: 310 EVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVE 369
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESVIVGTSI 331
A+D+F+QM + ++ N VT ++L A +H G+ G D ++ K ++ + T +
Sbjct: 370 AIDLFNQM-EQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCM 428
Query: 332 IDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCRAREA 375
+D+ + G V+ A M K +V +W +++ +H + A
Sbjct: 429 VDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMA 473
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/640 (35%), Positives = 352/640 (55%), Gaps = 39/640 (6%)
Query: 28 LFNKYVDKNNVFSWNS-----VIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
F++Y+ + + S V S LR + L PT + I +
Sbjct: 10 FFHRYIHRRTSKPYTSAAHRAVPISFPSSPASSTGLRELDLLHAGELAPTPRLYHSIIAA 69
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
C+ +L + H D F+ ++LI MY KCG +SDAR +FD++P R ++V
Sbjct: 70 CAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSR--DVV 127
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
SWT ++ GY QN EA+ L + L G + F + CS
Sbjct: 128 SWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT------FTSLLKATGACGGCS--- 178
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ E H +K +D +V VG+ L+D YAR +D++ VFD ++ K+ V+WN++IA
Sbjct: 179 ---IGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 235
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
+A+ L F +M ++ T S++ A A +G L G+ +H +IK +
Sbjct: 236 GFARKADGETTLMKFAEMQRN-GFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQK 294
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ VG +++ MY K G + ARK F++M ++++ +W M+ + +EA+ F ++
Sbjct: 295 LTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEI 354
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
K G++ N ITF+SVL+ACSH GLV+EG H+ + M ++N++P ++HY VDLLGRAG
Sbjct: 355 RKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYVSFVDLLGRAGL 413
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
LKEA + M ++ VWG+LLGACR+HKN +G+ AA +FEL+P++ G VLL NI
Sbjct: 414 LKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNI 473
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
YA+ G+W D R R +MK + K P S V++ VH F+ D HP+ IY EE+
Sbjct: 474 YASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEI 533
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVC 604
N+++++ GYV + V+ ++++E+E L+ HSEK+A N+R+C
Sbjct: 534 NMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRIC 593
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
GDCH+ + +SKV REIVVRD+ RFH+F +G CSCGDYW
Sbjct: 594 GDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/646 (37%), Positives = 369/646 (57%), Gaps = 43/646 (6%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-----SLTPTRSTFP 77
TN +F K + NV SWN+++ + GD+ F +R++ + T
Sbjct: 94 TNAQMIF-KMNNNKNVVSWNTMVGGFSAEGDT---HGTFDVLRQMLAGGEDVKADEVTIL 149
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
A+ C L S K+ H + F + V++A + Y+KCG LS A+++F I R
Sbjct: 150 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI--R 207
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ + SW +++ G+ Q+++ R +L + + + DS + S+LSA
Sbjct: 208 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI------------SGLLPDSFTVCSLLSA 255
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
CS++ + + HGF+I+ + ++ V +++ Y G + + +FD M +K V+W
Sbjct: 256 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 315
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N++I Y QNG AL VF QMV C +++ V A + L LRLG+ H +
Sbjct: 316 NTVITGYLQNGFPDRALGVFRQMVLYGIQLC-GISMMPVFGACSLLPSLRLGREAHAYAL 374
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
K LE+ + S+IDMY K G + + K FN +KEK+ SW AMI GYG+H A+EA+
Sbjct: 375 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 434
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
LF +M + G P+ +TF+ VL+AC+H+GL+ EG +L+ M F ++P ++HY C++D+L
Sbjct: 435 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 494
Query: 438 GRAGKLKEAYDLI-EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYH 496
GRAG+L +A ++ E M +AD +W SLL +CRIH+N+++GE A KLFELEP +
Sbjct: 495 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENY 554
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
VLLSN+YA G+WEDV + R M L K G S +EL KV +F+VG++ E+I
Sbjct: 555 VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIK 614
Query: 557 EYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------------- 599
L +K+ ++GY D SV HD+ +EEK LR HSEKLA
Sbjct: 615 SLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVY 674
Query: 600 -NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH +LISKV++REIVVRD+KRFH+FK+G+CSCGDYW
Sbjct: 675 KNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 720
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 222/459 (48%), Gaps = 31/459 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKL----SLTPTRSTFPCAIKSCSALHDLHSG 92
N SWNS+I + G S E+ M + + P +T + C+ ++ G
Sbjct: 2 NFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 61
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K H A +++ +++AL+DMYSKCG +++A+ +F +N+VSW +M+ G+
Sbjct: 62 KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK--MNNNKNVVSWNTMVGGFS 119
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ + ++ L GG ++V D V I + + C + + H
Sbjct: 120 AEGDTHGTFDVLRQML-----AGG-----EDVKADEVTILNAVPVCFHESFLPSLKELHC 169
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ +K+ F V N + +YA+ G + +++VF G+ K +WN++I +AQ+
Sbjct: 170 YSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRL 229
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
+LD QM K + + ++ T+ ++L A + L LRLGK +H +I+ LE + V S++
Sbjct: 230 SLDAHLQM-KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 288
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+Y CG++ + F+ M++K++ SW +I GY + AL +F +M+ G++ I
Sbjct: 289 SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 348
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE---HYGC-MVDLLGRAGKLKEAYD 448
+ + V ACS ++ L H + ++ +E C ++D+ + G + ++
Sbjct: 349 SMMPVFGACSLLPSLR-----LGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 403
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
+ G+K K+ W +++ IH A KLFE
Sbjct: 404 VFNGLKEKST-ASWNAMIMGYGIHGLAK----EAIKLFE 437
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 135/266 (50%), Gaps = 11/266 (4%)
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA-IASVLSA 197
RN VSW SM+ + N + E+ LL E + EN D F+ VA + +VL
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMM---------EENGDGAFMPDVATLVTVLPV 51
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C+R G+ +G HG+ +K D E+ + N L+D Y++ G + ++ +F K+ V+W
Sbjct: 52 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 111
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
N+++ ++ G DV QM+ DVK + VT+ + H L K +H
Sbjct: 112 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 171
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
+K + + +V + + Y KCG + A++ F+ ++ K V SW A+I G+ R +L
Sbjct: 172 LKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSL 231
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACS 402
D +M +G+ P+ T S+LSACS
Sbjct: 232 DAHLQMKISGLLPDSFTVCSLLSACS 257
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD---VKCNAVTLSAVLLAIAHLGVLRL 308
++ V+WNS+I +++ NG + E+ + +M++ + TL VL A + L
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK +H +K+ L++ +++ +++DMY KCG + A+ F KNV SW M+ G+
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 369 HCRAREALDLFYKMIKAG--VRPNYITFVSVLSACSHAGLV 407
D+ +M+ G V+ + +T ++ + C H +
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 161
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/574 (38%), Positives = 348/574 (60%), Gaps = 20/574 (3%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN D+ NV WN ++ + D ++ F M+ + P + T+PC +++C+
Sbjct: 301 IFNS-SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ G+Q H + GF D++VS LIDMYSK G L AR++ + + ++ ++VSWTSM
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK--DVVSWTSM 417
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GYVQ++ ++AL FKE +CG ++ D++ +AS +S C+ +N +
Sbjct: 418 IAGYVQHECCKDALAAFKEM----QKCG--------IWPDNIGLASAISGCA--GINAMR 463
Query: 208 EG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+G H + G+ +V + N L++ YAR G + + F+ M KD +T N +++ +A
Sbjct: 464 QGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFA 523
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q+GL EAL VF +M +S VK N T + L A A+L ++ GK IH +VIK
Sbjct: 524 QSGLHEEALKVFMRMDQS-GVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFET 582
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VG ++I +Y KCG + A+ F++M E+N SW +I H R EALDLF +M K
Sbjct: 583 EVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKE 642
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G++PN +TF+ VL+ACSH GLV+EG + +M E+ I P +HY C++D+ GRAG+L
Sbjct: 643 GIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDR 702
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A IE M + AD +VW +LL AC++HKN+++GE AAK L ELEP++ +VLLSN YA
Sbjct: 703 AKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAV 762
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
+W + ++ R +M++R + K PG S +E++ VHAF VGD+ HP E+IY +L +N +
Sbjct: 763 TEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDR 822
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
+ +VGY + + HD +QE ++ T +HSEKLA
Sbjct: 823 VAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLA 856
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 222/431 (51%), Gaps = 21/431 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F + ++NV SW ++++ A+ G EAL + M + + PT + SC+
Sbjct: 99 VFEELSARDNV-SWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAE 157
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H Q + GF ++FV +A+I +Y +CG A ++F ++P R+ V++ ++
Sbjct: 158 LFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPH--RDTVTFNTL 215
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G+ Q + AL +F EE + G S D V I+S+L+AC+ ++ +
Sbjct: 216 ISGHAQCGHGEHALEIF-----EEMQFSGLSP-------DCVTISSLLAACA--SLGDLQ 261
Query: 208 EGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+G H ++ K G S+ + +L+D Y + G V+ + +F+ + V WN ++ +
Sbjct: 262 KGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFG 321
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q A++ ++F QM ++ ++ N T +L + LG+ IH +K E +
Sbjct: 322 QINDLAKSFELFCQM-QAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM 380
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V +IDMY K G ++ AR+ +KEK+V SWT+MIAGY H ++AL F +M K
Sbjct: 381 YVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC 440
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ P+ I S +S C+ +++G ++ + V + +V+L R G+++E
Sbjct: 441 GIWPDNIGLASAISGCAGINAMRQGLQ-IHARIYVSGYSGDVSIWNALVNLYARCGRIRE 499
Query: 446 AYDLIEGMKVK 456
A+ E M++K
Sbjct: 500 AFSSFEEMELK 510
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 221/439 (50%), Gaps = 31/439 (7%)
Query: 76 FPCAIKSCSA-LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
F CA+++C + H +A G + V + LID+YSK G + AR++F+E+
Sbjct: 44 FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
R + VSW +ML+GY QN EAL L+++ + V ++SV
Sbjct: 104 SAR--DNVSWVAMLSGYAQNGLGEEALGLYRQM------------HRAGVVPTPYVLSSV 149
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
LS+C++ + H K GF SE+ VGN +I Y R G ++ +VF M +D
Sbjct: 150 LSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDT 209
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
VT+N++I+ +AQ G AL++F++M + + + + VT+S++L A A LG L+ G +H
Sbjct: 210 VTFNTLISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
+ K + I+ S++D+Y KCG V+ A FN NV W M+ +G +
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----Y 430
+ +LF +M AG+RPN T+ +L C+ + L H +++ G E
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREID-----LGEQIHSLSVKTGFESDMYVS 383
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--L 488
G ++D+ + G L++A ++E +K K D V W S++ H+ A K++ + +
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEK-DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 489 EPNNCGYHVLLSNIYANAG 507
P+N G L S I AG
Sbjct: 443 WPDNIG---LASAISGCAG 458
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/637 (37%), Positives = 374/637 (58%), Gaps = 39/637 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ ++ + SWN++I+ +E LR F MR+ + P T I +C AL
Sbjct: 252 VFDRMPRRDRI-SWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALG 310
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G++ H GF +V V+++LI M+S G +A +F ++ +++VSWT+M
Sbjct: 311 DERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKM--EFKDLVSWTAM 368
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY +N +A+ + + + E E V D + IASVLSAC+ + +
Sbjct: 369 ISGYEKNGLPEKAV---ETYTIMEHE---------GVVPDEITIASVLSACAGLGLLDKG 416
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H F + G S V V N+LID Y++ +D + +VF + K+ ++W SII N
Sbjct: 417 IMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLN 476
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+ EAL F QM+ S +K N+VTL +VL A A +G L GK IH ++ L +
Sbjct: 477 YRSFEALFFFQQMILS--LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFL 534
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+++DMY +CG+++ A FN EK+V SW ++ GY + A++LF+KMI++ V
Sbjct: 535 PNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDV 593
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ ITF S+L ACS +G+V +G + +M H+F+I P ++HY +VDLLGRAG+L++AY
Sbjct: 594 NPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAY 653
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ I+ M + D +WG+LL ACRI++NV+LGE+AA+ +FE++ + GY++LL N+YA++G
Sbjct: 654 EFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSG 713
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+W++V R R +M+ RL PG S VE+ G+VHAFL GD HPQ ++I LE K++
Sbjct: 714 KWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKME 773
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
G S D+D + E+ HSE+LA NL +C +CH
Sbjct: 774 ATGLSMSKDSRRDDIDASKAEIFCG-HSERLAIAFGLINTVPGTPIWVTKNLYMCENCHN 832
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD--YW 644
++ ISKVV R I VRD+++FH+FKDG+CSCGD YW
Sbjct: 833 TVKFISKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 244/443 (55%), Gaps = 28/443 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F K +++ +FSWN ++ A+ G EAL + M + + P TFPC +++C L
Sbjct: 151 VFGKMAERD-LFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLP 209
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL G++ H +GF DV V +ALI MY KCG++ AR +FD +P+R R +SW +M
Sbjct: 210 DLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDR--ISWNAM 267
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS--VAIASVLSACSRVTVNG 205
++GY +ND E L LF F++ E FVD + + SV+SAC +
Sbjct: 268 ISGYFENDVCLEGLRLF--FMMRE------------FFVDPDLMTMTSVISACEALGDER 313
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ HG+VIK GF +EV V N+LI ++ G D + VF M KD V+W ++I+ Y
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+NGL +A++ + M + V + +T+++VL A A LG+L G +H+ + L V
Sbjct: 374 KNGLPEKAVETYTIM-EHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYV 432
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
IV S+IDMY KC +D A + F+++ KNV SWT++I G ++ R+ EAL F +MI +
Sbjct: 433 IVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS 492
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY--GCMVDLLGRAGKL 443
++PN +T VSVLSAC+ G + G H G + + ++D+ R G++
Sbjct: 493 -LKPNSVTLVSVLSACARIGALSCG---KEIHAHALRTGLGFDGFLPNALLDMYVRCGRM 548
Query: 444 KEAYDLIEGMKVKADFVVWGSLL 466
+ A++ + D W LL
Sbjct: 549 EPAWNQFN--SCEKDVASWNILL 569
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 106/201 (52%), Gaps = 3/201 (1%)
Query: 207 TEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
+EG+ H +V K V +GN L+ + R G + + VF M E+D +WN ++ Y
Sbjct: 111 SEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGY 170
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
A+ G EAL+++ +M+ ++ + T VL L L G+ +H VI+ E
Sbjct: 171 AKAGYFDEALNLYHRML-WVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESD 229
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V V ++I MY KCG + AR F++M ++ SW AMI+GY + E L LF+ M +
Sbjct: 230 VDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMRE 289
Query: 385 AGVRPNYITFVSVLSACSHAG 405
V P+ +T SV+SAC G
Sbjct: 290 FFVDPDLMTMTSVISACEALG 310
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/670 (35%), Positives = 361/670 (53%), Gaps = 70/670 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSAL 86
+FN+ + + N++ WN++I A D ++ F M S P + TFP K+ S L
Sbjct: 128 VFNQ-IPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRL 186
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
LH G H D+F+ ++LI+ Y G A ++F +P + ++VSW +
Sbjct: 187 KVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGK--DVVSWNA 244
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR------ 200
M+ + +ALLLF+E +++ V + + + SVLSAC++
Sbjct: 245 MINAFALGGLPDKALLLFQEMEMKD------------VKPNVITMVSVLSACAKKIDLEF 292
Query: 201 -------VTVNGVTEGAHGFVIKRGFDSEVGVG--------------------NTLIDAY 233
+ NG TE H + D V G T++D +
Sbjct: 293 GRWICSYIENNGFTE--HLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGH 350
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
A+ G+ D + +FD M K WN++I+ Y QNG AL +F +M S D K + VTL
Sbjct: 351 AKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTL 410
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
L A A LG + G IH + K D+ + + TS++DMY KCG ++ A + F+ ++
Sbjct: 411 ICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVER 470
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
K+V W+AMI M+ + + ALDLF M++A ++PN +TF ++L AC+HAGLV EG
Sbjct: 471 KDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQL 530
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
M + I P ++HY C+VD+ GRAG L++A IE M + VWG+LLGAC H
Sbjct: 531 FEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHG 590
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
NV+L E+A + L ELEP N G VLLSNIYA AG WE V R LM++ + K P S +
Sbjct: 591 NVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSI 650
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE-KEMTLR 592
++ G VH FLVGD HP +KIY L+E++ K + +GY DM++++ +++ E +L
Sbjct: 651 DVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLN 710
Query: 593 IHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFK 634
+HSEKLA N+R+CGDCH +L+S++ DR+I++RD RFH+F+
Sbjct: 711 VHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFR 770
Query: 635 DGLCSCGDYW 644
G CSC DYW
Sbjct: 771 GGKCSCLDYW 780
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 2/225 (0%)
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
++ VF+ + + + WN++I YA + ++ +F M+ S N T + A +
Sbjct: 125 AKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAAS 184
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
L VL LG +H VIK L + + S+I+ Y G DLA + F M K+V SW A
Sbjct: 185 RLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNA 244
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MI + + +AL LF +M V+PN IT VSVLSAC+ ++ G W+ +
Sbjct: 245 MINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFG-RWICSYIENN 303
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ M+D+ + G + +A DL M K D V W ++L
Sbjct: 304 GFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEK-DIVSWTTML 347
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/589 (37%), Positives = 344/589 (58%), Gaps = 35/589 (5%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
+ + C + G++ H + V++ + LI Y KC L DAR +FD +P
Sbjct: 61 YNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMP 120
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+R N+VSWT+M++ Y Q A +AL LF + L +E + A+VL
Sbjct: 121 ER--NVVSWTAMISAYSQRGYASQALSLFVQMLRSGTE------------PNEFTFATVL 166
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
++C + + H +IK +++ V VG++L+D YA+ G + +R +F + E+D V
Sbjct: 167 TSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVV 226
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+ +II+ YAQ GL EAL++F ++ + ++ N VT ++VL A++ L L GK +H+
Sbjct: 227 SCTAIISGYAQLGLDEEALELFRRLQRE-GMQSNYVTYTSVLTALSGLAALDHGKQVHNH 285
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+++ ++ V++ S+IDMY KCG + AR+ F+ + E+ V SW AM+ GY H RE
Sbjct: 286 LLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREV 345
Query: 376 LDLFYKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH-EFNIEPGVEHYGCM 433
L+LF MI V+P+ +T ++VLS CSH GL +G M + +++P +HYGC+
Sbjct: 346 LELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCV 405
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
VD+LGRAG+++ A++ ++ M + +WG LLGAC +H N+D+GE +L ++EP N
Sbjct: 406 VDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENA 465
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
G +V+LSN+YA+AGRWEDV R+LM + + K PG S +EL +H F D HP+ E
Sbjct: 466 GNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRRE 525
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------- 599
++ ++EL+ + +E GYV D++ V+HDVD+E+KE L HSEKLA
Sbjct: 526 EVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPI 585
Query: 600 ----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH + SK+ RE+ +RD RFH G CSCGDYW
Sbjct: 586 RVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 173/340 (50%), Gaps = 17/340 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW ++I+ ++ G + +AL F M + P TF + SC G
Sbjct: 119 MPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLG 178
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H + V+V S+L+DMY+K G++ +AR +F +P+ R++VS T++++GY
Sbjct: 179 RQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPE--RDVVSCTAIISGYA 236
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q EAL LF+ E G N V SVL+A S + + H
Sbjct: 237 QLGLDEEALELFRRLQRE-----GMQSN-------YVTYTSVLTALSGLAALDHGKQVHN 284
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+++ S V + N+LID Y++ G++ +R++FD + E+ ++WN+++ Y+++G E
Sbjct: 285 HLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGRE 344
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI--KMDLEESVIVGTS 330
L++F+ M+ VK ++VT+ AVL +H G+ G I + K+ ++
Sbjct: 345 VLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGC 404
Query: 331 IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++DM + G+V+ A + +M E + W ++ +H
Sbjct: 405 VVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVH 444
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 246/657 (37%), Positives = 345/657 (52%), Gaps = 82/657 (12%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
+R +S P P A+KSCSAL + H A + G RD FV+S+L+ Y + G
Sbjct: 14 LRHVSFPPDPRLLPSALKSCSALR---LARALHAAAAVAGVSRDAFVASSLLHAYLRFGA 70
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS-- 181
+DAR + D +P R +V W++++ + + +A A L + + E + N
Sbjct: 71 TADARSVLDGMPHR--TVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLV 128
Query: 182 ---------------------DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
+ D+ ++ LSA V V E HG+V+K G
Sbjct: 129 SGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCR 188
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFD---------------GM---------------- 249
+ V LID Y + G D +VFD G+
Sbjct: 189 LDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREF 248
Query: 250 ----IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
IE + V+W SI+A QNG EA+D+F +M +S ++ N+VT+ VL A A++
Sbjct: 249 VGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREM-QSEGIEPNSVTIPCVLPAFANIAA 307
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L G+ H ++ + VG++++DMY KCG+V AR F M +NV SW AMI G
Sbjct: 308 LMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGG 367
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y MH A A+ LF M + +P+ +TF VL ACS AG +EG + N M H+ I P
Sbjct: 368 YAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISP 427
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
+EHY CMV LLGRAGKL +AYD+I M + D +WGSLLG+CR+H NV L E+AA+ L
Sbjct: 428 RMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENL 487
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
F+LEP N G +VLLSNIYA+ W+ V R R +MK L K G S +E++ KVH L G
Sbjct: 488 FQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAG 547
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
D HP I E L+ L ++++ +G+ V+HDV+++EK+ L +HSEKLA
Sbjct: 548 DSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVALGLI 607
Query: 600 ------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCH ++ IS REI VRD+ RFH+FKDG CSC DYW
Sbjct: 608 STSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 664
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 173/370 (46%), Gaps = 48/370 (12%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ NV +WN +++ L R G + +A+ A M P + CA+ + + D+ G+Q
Sbjct: 118 EPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQ 177
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDE--------------------- 133
H G D V++ALIDMY KCG + ++FDE
Sbjct: 178 LHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQ 237
Query: 134 IPQRIR------------NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
+ + +R N+VSWTS++ VQN EA+ LF+E S
Sbjct: 238 VSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREM------------QS 285
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
+ + +SV I VL A + + AH F +++GF ++ VG+ L+D YA+ G V
Sbjct: 286 EGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRD 345
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R +F+ M ++ V+WN++I YA +G A A+ +F M +S+ K + VT + VL A +
Sbjct: 346 ARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSM-QSSKEKPDLVTFTCVLGACS 404
Query: 302 HLGVLRLGKCIHDQVI-KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSW 359
G G+ +++ K + + ++ + + G++D A NQM E + W
Sbjct: 405 QAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIW 464
Query: 360 TAMIAGYGMH 369
+++ +H
Sbjct: 465 GSLLGSCRVH 474
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 128/264 (48%), Gaps = 25/264 (9%)
Query: 7 SSVSSVVSNVDKHSTNTNLTTLFNKYVDKN---NVFSWNSVIADLARGGDSVEALRAFSS 63
+S +++V+ + +++ + LF ++V + NV SW S++A + G +EA+ F
Sbjct: 223 ASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFRE 282
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M+ + P T PC + + + + L G+ AH + GFH D++V SAL+DMY+KCG
Sbjct: 283 MQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGR 342
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ DAR +F+ +P RN+VSW +M+ GY + A A+ LF+ S S
Sbjct: 343 VRDARMIFEAMP--YRNVVSWNAMIGGYAMHGEAENAVRLFR------------SMQSSK 388
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVI----KRGFDSEVGVGNTLIDAYARGGHV 239
D V VL ACS+ G TE + K G + ++ R G +
Sbjct: 389 EKPDLVTFTCVLGACSQA---GWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKL 445
Query: 240 DVSRKVFDGM-IEKDAVTWNSIIA 262
D + + + M E D W S++
Sbjct: 446 DDAYDIINQMPFEPDGCIWGSLLG 469
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/651 (37%), Positives = 360/651 (55%), Gaps = 37/651 (5%)
Query: 16 VDKHST--NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTR 73
VD +S + ++ L V K +V SWN+ I+ G AL M+ L P
Sbjct: 244 VDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNV 303
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGF--HRDVFVSSALIDMYSKCGELSDARKLF 131
T +K+C+ F+ D ++ AL+DMY+K G L DARK+F
Sbjct: 304 FTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVF 363
Query: 132 DEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAI 191
+ IP++ +++ W ++++G E+L LF C E SD ++ +
Sbjct: 364 EWIPRK--DLLLWNALISGCSHGGCHGESLSLF---------CRMRKEGSD---INRTTL 409
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
A+VL + + + T H K GF S+ V N LID+Y + + + KVF+
Sbjct: 410 AAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSS 469
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
+ + + S+I +Q +A+ +F +M++ ++ + LS++L A A L GK
Sbjct: 470 DNIIAFTSMITALSQCDHGEDAIKLFMEMLRK-GLEPDPFVLSSLLNACASLSAYEQGKQ 528
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
+H +IK V G +++ Y KCG ++ A AF+ + +K V SW+AMI G H
Sbjct: 529 VHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGH 588
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
+ ALD+F +M+ + PN+IT SVL AC+HAGLV E + ++M F I+ EHY
Sbjct: 589 GKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYS 648
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPN 491
CM+DLLGRAGKL +A +L+ M +A+ VWG+LL A R+H++ +LG++AA+KLF LEP
Sbjct: 649 CMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPE 708
Query: 492 NCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQ 551
G HVLL+N YA+AG W++V + R LMK+ ++ K P S VEL+ +VH F+VGDK HP+
Sbjct: 709 KSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPR 768
Query: 552 HEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------ 599
IY LEEL + + GYV ++ +HDVD+ EKE+ L HSE+LA
Sbjct: 769 ARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGA 828
Query: 600 ------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH + ISK+V REI++RD RFH+F DG CSCGDYW
Sbjct: 829 PIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 196/386 (50%), Gaps = 19/386 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ N SWN +++ + +A+ F M + P F C + +C+
Sbjct: 157 VFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSR 216
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL +G++ H G+ +DVF ++AL+DMYSK G++ A +F ++P+ ++VSW +
Sbjct: 217 DLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPK--TDVVSWNAF 274
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS--ACSRVTVNG 205
++G V + + + AL E LL+ G NVF ++S+L A +
Sbjct: 275 ISGCVLHGHDQHAL----ELLLQMKSSGLVP----NVFT----LSSILKACAGAGAGAFA 322
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ HGF+IK DS+ +G L+D YA+ G +D +RKVF+ + KD + WN++I+ +
Sbjct: 323 LGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCS 382
Query: 266 QNGLAAEALDVFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
G E+L +F +M K +D+ N TL+AVL + A L + +H K+
Sbjct: 383 HGGCHGESLSLFCRMRKEGSDI--NRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSD 440
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V +ID Y KC + A K F + N+ ++T+MI +A+ LF +M++
Sbjct: 441 SHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLR 500
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEG 410
G+ P+ S+L+AC+ ++G
Sbjct: 501 KGLEPDPFVLSSLLNACASLSAYEQG 526
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 190/377 (50%), Gaps = 20/377 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ D +V SW+S++ + EAL AF +MR + P +K C+
Sbjct: 59 VFDETPDPCHV-SWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAP-- 114
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G Q H A G D+FV++AL+ MY G + +AR++FDE R RN VSW M
Sbjct: 115 DAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDE-AARDRNAVSWNGM 173
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ +V+ND +A+ LF E + V + + V++AC+
Sbjct: 174 MSAFVKNDRCSDAVELFGEMVWS------------GVRPNEFGFSCVVNACTGSRDLEAG 221
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H V++ G+D +V N L+D Y++ G + ++ VF + + D V+WN+ I+ +
Sbjct: 222 RKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLH 281
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVL--LAIAHLGVLRLGKCIHDQVIKMDLEESV 325
G AL++ QM KS+ + N TLS++L A A G LG+ IH +IK +
Sbjct: 282 GHDQHALELLLQM-KSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDD 340
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+G +++DMY K G +D ARK F + K++ W A+I+G E+L LF +M K
Sbjct: 341 YIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKE 400
Query: 386 GVRPNYITFVSVLSACS 402
G N T +VL + +
Sbjct: 401 GSDINRTTLAAVLKSTA 417
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 175/361 (48%), Gaps = 27/361 (7%)
Query: 114 LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
L+ YSKC AR++FDE P VSW+S++T Y N REAL F+
Sbjct: 43 LLSFYSKCRLPGSARRVFDETPDPCH--VSWSSLVTAYSNNALPREALAAFRAMRARGVR 100
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY 233
C N F + + A G+ H + G ++ V N L+ Y
Sbjct: 101 C--------NEFALPIVLKCAPDA-------GLGVQVHAVAVSTGLSGDIFVANALVAMY 145
Query: 234 ARGGHVDVSRKVFD-GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
G VD +R+VFD +++AV+WN +++ + +N ++A+++F +MV S V+ N
Sbjct: 146 GGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWS-GVRPNEFG 204
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
S V+ A L G+ +H V++ ++ V +++DMY K G + +A F ++
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVP 264
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
+ +V SW A I+G +H + AL+L +M +G+ PN T S+L AC+ AG
Sbjct: 265 KTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFA-- 322
Query: 413 WLNTMGHEFNIEPGV---EHYG-CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
L H F I+ ++ G +VD+ + G L +A + E + K D ++W +L+
Sbjct: 323 -LGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRK-DLLLWNALISG 380
Query: 469 C 469
C
Sbjct: 381 C 381
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 124/247 (50%), Gaps = 7/247 (2%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N L+ Y++ +R+VFD + V+W+S++ Y+ N L EAL F M ++ V
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAM-RARGV 99
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+CN L VL G LG +H + L + V +++ MY G VD AR+
Sbjct: 100 RCNEFALPIVLKCAPDAG---LGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARR 156
Query: 347 AFNQ-MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
F++ +++N SW M++ + + R +A++LF +M+ +GVRPN F V++AC+ +
Sbjct: 157 VFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSR 216
Query: 406 LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
++ G ++ M + V +VD+ + G + A L+ G K D V W +
Sbjct: 217 DLEAG-RKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAA-LVFGKVPKTDVVSWNAF 274
Query: 466 LGACRIH 472
+ C +H
Sbjct: 275 ISGCVLH 281
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/517 (42%), Positives = 319/517 (61%), Gaps = 15/517 (2%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K +VF WN++I A G EAL +S+M L P TFP ++SC+ L L G
Sbjct: 88 MPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREG 147
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H GF DVFV S+L+ MYS+ GE +F E+ +RNIVSWT+++ GYV
Sbjct: 148 KEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEM--VVRNIVSWTAVIAGYV 205
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN +E L +F+E + G ++ ++V + SVL AC+ + + + HG
Sbjct: 206 QNRYFKEGLGVFREMV------GSGTQP------NAVTLVSVLPACAGLEFLNLGKLIHG 253
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ IK G D +V + N LI Y + G+V+ +R +FDGM+ ++ V+WN++IA Y QN A
Sbjct: 254 YGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGAN 313
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+ +F +M ++ V + +T+ +V+ A A LG L G+ +H+ V + LE +V + ++I
Sbjct: 314 AVKLFRRM-QAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALI 372
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG +DLAR+ F ++ ++V SWT+MI H +AL LF +M GV+PN
Sbjct: 373 DMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSF 432
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF +V +AC H+GLV+EG +M +++I PGVEH CMVDLLGRAG L EAY+ I+
Sbjct: 433 TFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDK 492
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M V+ D VWG+LLG+CRIH N++L E+ A+KLF L+P ++VL+SNIYA AGRWED
Sbjct: 493 MPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDA 552
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
R R LM+ R L K PG SLVE+ + H FL G +
Sbjct: 553 ARLRKLMEERELKKIPGHSLVEVNRRFHTFLSGSRSQ 589
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 147/502 (29%), Positives = 250/502 (49%), Gaps = 47/502 (9%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD-ARKLFDE 133
+F + CS+L DL + H G +++ +S+ LI D ARK+FD+
Sbjct: 31 SFNYLLNCCSSLPDL---SRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQ 87
Query: 134 IPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
+P+ R++ W +++ GY EAL L+ S GA +F D+
Sbjct: 88 MPK--RDVFLWNTLIRGYADAGPCEEALALY-------SNMHGA-----GLFPDNYTFPF 133
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
V+ +C+ ++ + H ++K GFDS+V V ++L+ Y++ G VF M+ ++
Sbjct: 134 VVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRN 193
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V+W ++IA Y QN E L VF +MV S + NAVTL +VL A A L L LGK IH
Sbjct: 194 IVSWTAVIAGYVQNRYFKEGLGVFREMVGS-GTQPNAVTLVSVLPACAGLEFLNLGKLIH 252
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
IK+ ++ V + ++I +Y KCG V+ AR F+ M +N+ SW AMIA Y +
Sbjct: 253 GYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGA 312
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
A+ LF +M V +YIT VSV+SAC+ G + G W++ + +E V +
Sbjct: 313 NAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTG-RWMHELVKRKGLEINVSITNAL 371
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------ 487
+D+ + G + A ++ E + ++ V W S++GAC H + GE A KLF
Sbjct: 372 IDMYAKCGNIDLAREVFERLPCRS-VVSWTSMIGACASHGH---GE-DALKLFSRMKDEG 426
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFS----LVELRGKVHAFL 543
++PN+ + + + + E + S+M++ + PG +V+L G+ + +
Sbjct: 427 VKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSI--MPGVEHCACMVDLLGRAGSLM 484
Query: 544 VGDKEHPQHEKIYEYLEELNVK 565
+ YE+++++ V+
Sbjct: 485 ----------EAYEFIDKMPVE 496
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/624 (36%), Positives = 357/624 (57%), Gaps = 35/624 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SWN++++ L + +AL F M+ + P + + I + +L +GK+ H A
Sbjct: 316 SWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYA 375
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G ++ + + LIDMY+KC + F+ + ++ +++SWT+++ GY QN+ E
Sbjct: 376 IRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEK--DLISWTTIIAGYAQNECHLE 433
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+ LF++ ++ + VD + I SVL ACS + HG+V KR
Sbjct: 434 AINLFRKVQVKGMD------------VDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL 481
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+++ + N +++ Y GH D +R+ F+ + KD V+W S+I NGL EAL++F
Sbjct: 482 -ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYS 540
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
+ K T+++ +++ + + L A A+L L+ GK IH +I+ + +S++DMY CG
Sbjct: 541 L-KQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCG 599
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
V+ +RK F+ +K++++ WT+MI GMH EA+ LF KM V P++ITF+++L
Sbjct: 600 TVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLY 659
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
ACSH+GL+ EG + M + + +EP EHY CMVDLL R+ L+EAY + M +K
Sbjct: 660 ACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSS 719
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
VW +LLGAC IH N +LGE+AAK+L + + N G + L+SNI+A GRW DVE R M
Sbjct: 720 EVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRM 779
Query: 520 KNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL-QEVGYVTDMTSV 578
K L K PG S +E+ K+H F+ DK HPQ + IY L + L ++ GY+ V
Sbjct: 780 KGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFV 839
Query: 579 IHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
H+V +EEK L HSE+LA NLR+C DCHT ++ S+V R
Sbjct: 840 FHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHTFFKIASEVSQR 899
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
+VVRD+ RFH+F+ GLCSCGD+W
Sbjct: 900 ALVVRDANRFHHFERGLCSCGDFW 923
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 237/447 (53%), Gaps = 32/447 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++K + SWNS+I+ G +EAL F M+++ + TF A++ + G
Sbjct: 208 MEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG 267
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H A DV+V++ALI MY+KCG + DA ++F + R+ VSW ++L+G V
Sbjct: 268 MGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASM--LCRDYVSWNTLLSGLV 325
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV--TVNGVTEGA 210
QN+ R+AL F++ +NS D V++ ++++A R +NG +
Sbjct: 326 QNELYRDALNYFRDM-----------QNSAQK-PDQVSVLNLIAASGRSGNLLNG--KEV 371
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H + I+ G DS + +GNTLID YA+ V F+ M EKD ++W +IIA YAQN
Sbjct: 372 HAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECH 431
Query: 271 AEALDVFDQM-VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EA+++F ++ VK DV + + + +VL A + L + IH V K DL + +++
Sbjct: 432 LEAINLFRKVQVKGMDV--DPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLAD-IMLQN 488
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+I+++Y + G D AR+AF ++ K++ SWT+MI + EAL+LFY + + ++P
Sbjct: 489 AIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQP 548
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG----CMVDLLGRAGKLKE 445
+ I +S LSA ++ +++G H F I G G +VD+ G ++
Sbjct: 549 DSIAIISALSATANLSSLKKGKEI-----HGFLIRKGFFLEGPIASSLVDMYACCGTVEN 603
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIH 472
+ + +K + D ++W S++ A +H
Sbjct: 604 SRKMFHSVKQR-DLILWTSMINANGMH 629
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 217/438 (49%), Gaps = 18/438 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +F+WN+++ G +EA+ + MR L + TFP +K+C AL + G
Sbjct: 105 MTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLG 164
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H A GF VFV +ALI MY KCG+L AR LFD I + VSW S+++ +V
Sbjct: 165 AEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV 224
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
EAL LF+ E G AS ++ + L + + G HG
Sbjct: 225 TEGKCLEALSLFRRM----QEVGVAS--------NTYTFVAALQGVEDPSFVKLGMGIHG 272
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+K ++V V N LI YA+ G ++ + +VF M+ +D V+WN++++ QN L +
Sbjct: 273 AALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRD 332
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL+ F M S K + V++ ++ A G L GK +H I+ L+ ++ +G ++I
Sbjct: 333 ALNYFRDMQNSAQ-KPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLI 391
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KC V AF M EK++ SWT +IAGY + EA++LF K+ G+ + +
Sbjct: 392 DMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPM 451
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE-PGVEHYGCMVDLLGRAGKLKEAYDLIE 451
SVL ACS GL + G+ F + + +V++ G G A E
Sbjct: 452 MIGSVLRACS--GLKSRNF-IREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFE 508
Query: 452 GMKVKADFVVWGSLLGAC 469
++ K D V W S++ C
Sbjct: 509 SIRSK-DIVSWTSMITCC 525
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 210/445 (47%), Gaps = 41/445 (9%)
Query: 42 NSVIADLARGGDSVEALR------AFSSMRKLSL----TPTR--STFPCAIKSCSALHDL 89
S++ L SV L AF S+ LS TP+R + C A+ L
Sbjct: 3 TSIVTPLPLKSISVNTLNKGTLNPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAVKAL 62
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
G+Q H A + H F+++ L+ MY KCG L DA K+FDE+ + R I +W +M+
Sbjct: 63 PQGQQLH--ARLLKSHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTE--RTIFTWNAMMG 118
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
+V + EA+ L+KE + V +D+ SVL AC + + +
Sbjct: 119 AFVSSGKYLEAIELYKEMRVL------------GVAIDACTFPSVLKACGALGESRLGAE 166
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG-MIEK-DAVTWNSIIAIYAQN 267
HG +K GF V V N LI Y + G + +R +FDG M+EK D V+WNSII+ +
Sbjct: 167 IHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTE 226
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EAL +F +M + V N T A L + ++LG IH +K + V V
Sbjct: 227 GKCLEALSLFRRM-QEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYV 285
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++I MY KCG+++ A + F M ++ SW +++G + R+AL+ F M +
Sbjct: 286 ANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQ 345
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKL 443
+P+ ++ +++++A +G + G H + I G++ ++D+ + +
Sbjct: 346 KPDQVSVLNLIAASGRSGNLLNGKEV-----HAYAIRNGLDSNMQIGNTLIDMYAKCCCV 400
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGA 468
K E M K D + W +++
Sbjct: 401 KHMGYAFECMHEK-DLISWTTIIAG 424
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 112/234 (47%), Gaps = 20/234 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ ++ SW S+I G VEAL F S+++ ++ P A+ + + L L G
Sbjct: 510 IRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKG 569
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H GF + ++S+L+DMY+ CG + ++RK+F + Q R+++ WTSM+
Sbjct: 570 KEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQ--RDLILWTSMINANG 627
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ EA+ LFK+ +NV D + ++L ACS + + EG
Sbjct: 628 MHGCGNEAIALFKKM------------TDENVIPDHITFLALLYACSHSGL--MVEGKRF 673
Query: 213 F-VIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
F ++K G+ E + ++D +R ++ + + M I+ + W +++
Sbjct: 674 FEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLG 727
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/584 (38%), Positives = 342/584 (58%), Gaps = 54/584 (9%)
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
AI C L G+Q H + G+ +++++ L+ MY++CG L DAR + D +P+R
Sbjct: 41 AITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPER- 99
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
N+VSWT+M++GY QN+ +A LF L
Sbjct: 100 -NVVSWTAMISGYSQNERPDQAWELFIMML------------------------------ 128
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
R ++ V + H F +K F+ + VG++L+D YA+ ++ +R+VFD + +D V++
Sbjct: 129 -RAGIHQVKQ-VHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYT 186
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
+I++ Y Q GL EALD+F +++ + ++CN VT +A+L A++ L + GK +H +++
Sbjct: 187 AILSGYTQLGLDEEALDLF-RLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILR 245
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
+L + + S+IDMY KCG++ +R+ F+ M E++V SW AM+ GYG H A E + L
Sbjct: 246 RELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQL 305
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
F M V+P+ +T ++VLS SH GLV EG + + E + EHYGC++DLLG
Sbjct: 306 FRSMCDE-VKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLG 364
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVL 498
R+G+L++A +LIE M + +WGSLLGACR+H NV +GE A+KL ++EP N G +V+
Sbjct: 365 RSGQLQKALNLIEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVI 424
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEY 558
LSNIYA AG W+DV R R LM + + K PG S + L +H F ++ HP+ E I
Sbjct: 425 LSNIYAAAGMWKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAK 484
Query: 559 LEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------N 600
++E+ V ++ G+V D++ V+HDVD E+KE L HSEKLA N
Sbjct: 485 IKEIYVAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKN 544
Query: 601 LRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
LR+C DCH + +SKV REI +RD RFH +G C+CGDYW
Sbjct: 545 LRICVDCHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 588
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 173/342 (50%), Gaps = 44/342 (12%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW ++I+ ++ +A F M + + H
Sbjct: 96 MPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGI--------------------HQV 135
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H A F +FV S+L+DMY+K + +AR++FD +P R ++VS+T++L+GY
Sbjct: 136 KQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPAR--DVVSYTAILSGYT 193
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q EAL LF+ E +C + V ++L+A S ++ + HG
Sbjct: 194 QLGLDEEALDLFRLLYNEGMQC------------NQVTFTALLNALSGLSSMDYGKQVHG 241
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+++R + + N+LID Y++ G + SR+VFD M E+ V+WN+++ Y ++GLA E
Sbjct: 242 LILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHE 301
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS-- 330
+ +F M +VK ++VTL AVL +H G++ G + D ++K E+S ++ T
Sbjct: 302 VVQLFRSMCD--EVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVK---EQSTLLNTEHY 356
Query: 331 --IIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
+ID+ + GQ+ A +M + R+ W +++ +H
Sbjct: 357 GCVIDLLGRSGQLQKALNLIEKMPFQPTRAIWGSLLGACRVH 398
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/635 (36%), Positives = 355/635 (55%), Gaps = 75/635 (11%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS-TFPCAIKSCSALHDL 89
+Y +VF N++I L ++L F MR+ S +P S +F +K+ + L +
Sbjct: 63 RYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSV 122
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
G Q H QA + G +FV + LI MY +CG + ARK+FDE+P+ N ++W +M+T
Sbjct: 123 RVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEP--NAIAWNAMVT 180
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
C G D + + +++S
Sbjct: 181 AC----------------------CRGGDMKGGRELFDLMPVRNLMS------------- 205
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
N ++ Y + G ++++R++F M KD V+W+++I +A NG
Sbjct: 206 ----------------WNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGY 249
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EA F ++ + ++ N +L+ VL A A G L GK +H + K L V V
Sbjct: 250 FEEAFSFFREL-QRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNN 308
Query: 330 SIIDMYCKCGQVDLARKAFNQ-MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
+++D Y KCG V +A+ F + M E+N+ SWT+M+A MH EA+ +F+KM ++G+R
Sbjct: 309 ALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIR 368
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+ I F+S+L ACSHAGLV++G + + M +NIEP +EHYGCMVDL GRAG+L++AY+
Sbjct: 369 PDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYE 428
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
+ M + ++W +LLGAC +H +V L E ++L EL+PNN HVLLSN YA AG+
Sbjct: 429 FVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGK 488
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ- 567
W+D R M +R+ KTPG+S++E+ ++ FL G K++ E+ Y+ L+E+ +L+
Sbjct: 489 WKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEIIRRLRV 548
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E GYV ++ V+HD+++EEKE ++ +HSEKLA NLR+C DCH
Sbjct: 549 EGGYVPEIGRVLHDIEEEEKEGSVSVHSEKLAVAFGIARLCKGRTIRIVKNLRICRDCHA 608
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
V++LIS++ EIVVRD RFH FKDG CSC DYW
Sbjct: 609 VMKLISQIYKVEIVVRDRSRFHSFKDGYCSCRDYW 643
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 144/348 (41%), Gaps = 76/348 (21%)
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLID--AYARGGHVDVSRKVFDGMI 250
S+L+ C +T + H V+K G +S+ + L+ A + +D + ++F
Sbjct: 10 SLLNICKSLTT---FKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTP 66
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
D N++I ++ ++L F +M +++ ++ + + ++ A A+L +R+G
Sbjct: 67 NPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGI 126
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE----------------- 353
+H Q + L+ + VGT++I MY +CG V ARK F++M E
Sbjct: 127 QLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGG 186
Query: 354 --------------KNVRSWTAMIAGYGMHCRAREALDLFYKMI---------------- 383
+N+ SW M+AGY A ++F +M
Sbjct: 187 DMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAH 246
Query: 384 ---------------KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG-- 426
+ G+RPN + VLSAC+ AG ++ G + H F + G
Sbjct: 247 NGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFG-----KILHGFIEKSGLA 301
Query: 427 --VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
V ++D + G + A + E + + + V W S++ A +H
Sbjct: 302 WIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMH 349
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F + +++ N+ SW S++A LA G EA+ F M + + P F + +CS
Sbjct: 326 VFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAG 385
Query: 88 DLHSGKQAH-QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ G + + ++ + ++D+Y + G+L A + ++P I+ W +
Sbjct: 386 LVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAII-WRT 444
Query: 147 ML 148
+L
Sbjct: 445 LL 446
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/607 (38%), Positives = 331/607 (54%), Gaps = 61/607 (10%)
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
L PT P S L L KQ H FH + +
Sbjct: 69 LKFNPTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHFHHALQIP--------------- 113
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
++ P + W ++T Y + + R AL ++ + + E V
Sbjct: 114 ----LNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFE------------V 157
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D+ SVL AC +V+ + + HGFV+K+G D +V VGN L+ Y V+ +R VF
Sbjct: 158 DNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVF 217
Query: 247 DGMIEKDAVTW----NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV----LL 298
D M+E+D V+W +++ +YA+ G A +F+ + + T V A+ + L
Sbjct: 218 DKMMERDVVSWIPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLE 277
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESV----IVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
L + + I I M +E V I+ T+++DMY KCG ++ A + F + +
Sbjct: 278 EGTKLFIRMQEENIFPNEITMLNKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISR 337
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
++ W A+I G+ MH EALD+F +M + GV+PN ITF+ +L ACSHAGLV EG
Sbjct: 338 DICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLF 397
Query: 415 NTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
M H F + P +EHYGCMVDLLGRAG L EA+++I+ M +K + +VWG+L+ ACR+HKN
Sbjct: 398 EKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKN 457
Query: 475 VDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVE 534
LGE+AA +L E+EP NCGY+VL+SNIYA A RW D R MK + K PG S++E
Sbjct: 458 PQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIE 517
Query: 535 LRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIH 594
+ G VH FL+GD+ HPQ +I E L E+ KL E GYV D ++V+ ++D+EEKE L H
Sbjct: 518 VNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYH 577
Query: 595 SEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDG 636
SEKLA NLRVC DCH +L+SK+ R I+VRD RFH+F++G
Sbjct: 578 SEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREG 637
Query: 637 LCSCGDY 643
CSCGDY
Sbjct: 638 YCSCGDY 644
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 157/367 (42%), Gaps = 74/367 (20%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
WN VI + AL ++ +RK+ P +K+C + GK+ H
Sbjct: 126 QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 185
Query: 100 FIFGFHRDVFV-----------------------------------SSALIDMYSKCGEL 124
G RDVFV ++AL+DMY+KCG L
Sbjct: 186 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHL 245
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
AR+LF+ + Q + +VSWT+M+ G ++++ E LF +N+
Sbjct: 246 GLARQLFNGLTQ--KTVVSWTAMIAGCIRSNRLEEGTKLFIRM------------QEENI 291
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
F + + + + RV V+ + A L+D YA+ G ++ + +
Sbjct: 292 FPNEITMLNK----ERVEVDCILNTA------------------LVDMYAKCGDINAAGR 329
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
+F I +D WN+II +A +G EALD+F +M + VK N +T +L A +H G
Sbjct: 330 LFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQ-GVKPNDITFIGLLHACSHAG 388
Query: 305 VLRLGKCIHDQVI-KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAM 362
++ GK + ++++ L + ++D+ + G +D A + M K N W A+
Sbjct: 389 LVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGAL 448
Query: 363 IAGYGMH 369
+A +H
Sbjct: 449 VAACRLH 455
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQ-A 99
WN++I A G EAL F+ M + + P TF + +CS + GK+ ++
Sbjct: 342 WNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMV 401
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
FG + ++D+ + G L +A ++ +P + IV W +++ + N +
Sbjct: 402 HTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIV-WGALVAACRLHKNPQL 460
Query: 160 ALLLFKEFL-LEESECG 175
L + L +E CG
Sbjct: 461 GELAATQLLEIEPENCG 477
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/558 (40%), Positives = 338/558 (60%), Gaps = 48/558 (8%)
Query: 106 RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
RD+F + ++ Y + +L AR LF+ +P+R +IVSW +ML+GY QN EA +F
Sbjct: 24 RDLFSWNVMLTGYVRNRDLKTARALFERMPER--DIVSWNAMLSGYAQNGFVDEAREIFY 81
Query: 166 EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGV 225
+ L+ + ++ +L+A NG E A KR F+S++
Sbjct: 82 KMPLK----------------NGISWNGLLAA---YVQNGRIEDA-----KRLFESKMDW 117
Query: 226 GNTLIDAYA-RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
TL+ GG V R +FD M ++D+++W+++IA Y+QNG + EAL F +M +
Sbjct: 118 --TLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDC 175
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+ + N + + L +++ L LG+ +H +++K + VG +++ MYCKCG +D A
Sbjct: 176 E-RLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEA 234
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R AF ++ EK+V SW MI GY H EAL +F M G+RP+ T VSVL+ACSHA
Sbjct: 235 RDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHA 294
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGS 464
GLV +G + +M ++ I + HY CMVDLLGRAG+L+EA +L++ M + D WG+
Sbjct: 295 GLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGA 354
Query: 465 LLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRL 524
LLGA RIH N +LGE AA+ +FE+EP+N G ++LLS +YA +GRW D + R M+N+ +
Sbjct: 355 LLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGV 414
Query: 525 AKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQ 584
K PG+S +E++ K+H F VGD HP +KIY +LEE+++KL++ GY++ V HDV++
Sbjct: 415 KKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEE 474
Query: 585 EEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRD 626
EEK L+ HSEKLA NLRVC DCH I+ ISK+V R I++RD
Sbjct: 475 EEKVHMLKYHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRD 534
Query: 627 SKRFHYFKDGLCSCGDYW 644
+ RFHYF+ G CSC D+W
Sbjct: 535 NHRFHYFEGGSCSCRDFW 552
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 172/379 (45%), Gaps = 70/379 (18%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K +++ +FSWN ++ R D A F M P R I S +A+
Sbjct: 17 LFDKMPERD-LFSWNVMLTGYVRNRDLKTARALFERM------PERD-----IVSWNAML 64
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVS---------SALIDMYSKCGELSDA----------- 127
++ Q F+ R++F + L+ Y + G + DA
Sbjct: 65 SGYA-----QNGFV-DEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWT 118
Query: 128 ---------------RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
R LFD +PQ R+ +SW++M+ GY QN + EAL F E +
Sbjct: 119 LVSWNCLMGGFVRKRRNLFDNMPQ--RDSISWSAMIAGYSQNGCSEEALHFFVEM---QR 173
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
+C + +S LS CS + + H ++K G+ + VGN L+
Sbjct: 174 DCERLNRSS---------FTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAM 224
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
Y + G +D +R F ++EKD V+WN++I YA++G EAL VF +++K+T ++ + T
Sbjct: 225 YCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVF-ELMKTTGIRPDDAT 283
Query: 293 LSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
+ +VL A +H G++ G + + + ++ T ++D+ + GQ++ A+ M
Sbjct: 284 MVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNM 343
Query: 352 K-EKNVRSWTAMIAGYGMH 369
E + +W A++ +H
Sbjct: 344 PFEPDAATWGALLGASRIH 362
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 132/261 (50%), Gaps = 24/261 (9%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
LF+ ++++ SW+++IA ++ G S EAL F M++ RS+F CA+ +CS +
Sbjct: 135 NLFDNMPQRDSI-SWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNI 193
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G+Q H + G+ +V +AL+ MY KCG + +AR F EI + +++VSW +
Sbjct: 194 AALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILE--KDVVSWNT 251
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ GY ++ EAL +F+ + + D + SVL+ACS + V
Sbjct: 252 MIHGYARHGFGEEALTVFELM------------KTTGIRPDDATMVSVLAACSHAGL--V 297
Query: 207 TEGAHGFV-IKR--GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
+G+ F + R G +++ ++D R G ++ ++ + M E DA TW +++
Sbjct: 298 DQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLG 357
Query: 263 ---IYAQNGLAAEALDVFDQM 280
I+ L +A + +M
Sbjct: 358 ASRIHGNTELGEKAAQIIFEM 378
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/637 (36%), Positives = 362/637 (56%), Gaps = 44/637 (6%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+LF+ ++ + + SWN +I S +A+ F + P T PC +K C+ L
Sbjct: 70 SLFD-WIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLL-CDFVPDSFTLPCVLKGCARL 127
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L GKQ H GF D FV S+L+ MYSKCGE+ RK+FD + + ++VSW S
Sbjct: 128 GALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDK--DVVSWNS 185
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ GY + AL +F+E ++S S + +D + + +G
Sbjct: 186 LIDGYARCGEIELALEMFEEMPEKDS-------FSWTILIDGL------------SKSGK 226
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
E A + + V N +I+ Y + G + ++++FD M E+ VTWNS+I Y +
Sbjct: 227 LEAARDVFDRMPIRNSVS-WNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYER 285
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
N +AL +F+ M++ D+ N T+ + A + + L G+ +H ++K + +
Sbjct: 286 NKQFTKALKLFEVMLRE-DISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGV 344
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
+GT +I+MY KCG V A + F + +K + WT++I G GMH + L+LF +M + G
Sbjct: 345 LGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTG 404
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
++P+ ITF+ VL+ACSHAG ++ + M +++ I+P +EHYGC++D+L RAG L+EA
Sbjct: 405 LKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEA 464
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
D IE M +KA+ V+W SLL R H N+ +GE AA+ L +L P+ G +V+LSN+YA A
Sbjct: 465 KDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAA 524
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
G WE V + R +MK + + K PG S +E +G +H F+VGDK HPQ E+IY L E+ KL
Sbjct: 525 GLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKL 584
Query: 567 QEVGYVTDMTSVIHDVDQE-EKEMTLRIHSEKLA------------------NLRVCGDC 607
G++ D T V+ ++++ EKE L HSE+LA NLR+C DC
Sbjct: 585 NVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDC 644
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H V +L+S + +REI++RD RFH+FK G CSC D+W
Sbjct: 645 HAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 147/305 (48%), Gaps = 27/305 (8%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYA--RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H IK + V + L+ YA R ++ + +FD + E V+WN +I Y +N
Sbjct: 35 HALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQ 94
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
+ +A+ +F +++ D ++ TL VL A LG L+ GK IH V+K+ V
Sbjct: 95 RSNDAIALFCKLL--CDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVL 152
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
+S++ MY KCG+++L RK F++M++K+V SW ++I GY AL++F +M +
Sbjct: 153 SSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEK--- 209
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
+ ++ ++ S +G ++ + M ++ + M++ +AG A +
Sbjct: 210 -DSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVS-----WNAMINGYMKAGDSNTAKE 263
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLSNI 502
L + M ++ V W S++ +K A KLFE + PN Y +L +
Sbjct: 264 LFDQMPERS-LVTWNSMITGYERNKQF----TKALKLFEVMLREDISPN---YTTILGAV 315
Query: 503 YANAG 507
A +G
Sbjct: 316 SAASG 320
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/611 (36%), Positives = 346/611 (56%), Gaps = 41/611 (6%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P+ + I +C L GK+ H F + +S+ LI MY+KCG L DA+ L
Sbjct: 61 PSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQML 120
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN---SDNVFVD 187
FDEIPQ+ ++ SW +M++GY +A LF E ++ A + S +++
Sbjct: 121 FDEIPQK--DLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYME 178
Query: 188 SVAIASVLSACSRVTVNGVT-----------------EGAHGFVIKRGFDSEVGVGNTLI 230
++ + ++ N T + HG++I+ G + + V L+
Sbjct: 179 ALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALL 238
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
D Y + G ++ +R +FD M +KD V+W ++I ++G E +F ++ S V+ N
Sbjct: 239 DLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGS-GVRPNE 297
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
T + VL A A L ++GK +H + ++ + ++++ +Y KCG + AR+ FNQ
Sbjct: 298 YTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQ 357
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
M ++ SWT++I GY + + AL F ++++G +P+ ITFV VLSAC+HAGLV G
Sbjct: 358 MPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIG 417
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
+ +++ + + +HY C++DLL R+G+ KEA ++I+ M +K D +W SLLG CR
Sbjct: 418 LEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCR 477
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
IH N++L E AAK LFELEP N ++ LSNIYANAG W + + R+ M NR + K PG
Sbjct: 478 IHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGK 537
Query: 531 SLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMT 590
S +E++ +VH FLVGD HP+ I+EYL EL+ K++E GYV D V+HDV++E+KE
Sbjct: 538 SWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQN 597
Query: 591 LRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHY 632
+ HSEKLA NLR C DCH ++ ISK+V R+I+VRDS RFH
Sbjct: 598 IFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHC 657
Query: 633 FKDGLCSCGDY 643
F DG CSC DY
Sbjct: 658 FVDGSCSCKDY 668
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 193/388 (49%), Gaps = 26/388 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK-LSLTPTRSTFPCAIKSCSAL 86
LF++ ++N FSWN+VI+ G +EAL F M++ S T A+ + +A+
Sbjct: 151 LFDEMPHRDN-FSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAI 209
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L GK+ H G D V +AL+D+Y KCG L++AR +FD++ ++IVSWT+
Sbjct: 210 SSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMAD--KDIVSWTT 267
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ ++ +E LF++ + V + A VL+AC+ + +
Sbjct: 268 MIHRCFEDGRKKEGFSLFRDLM------------GSGVRPNEYTFAGVLNACADLAAEQM 315
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ HG++ + G+D + L+ Y++ G+ + +R+VF+ M D V+W S+I YAQ
Sbjct: 316 GKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQ 375
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESV 325
NG AL F+ +++S K + +T VL A H G++ +G + H K L +
Sbjct: 376 NGQPDMALQFFESLLRS-GTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTA 434
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMHCRAREALDLFYKMIK 384
+ID+ + G+ A + M K + W +++ G CR ++L + K
Sbjct: 435 DHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGG----CRIHGNIELAERAAK 490
Query: 385 A--GVRP-NYITFVSVLSACSHAGLVQE 409
A + P N T++++ + ++AGL E
Sbjct: 491 ALFELEPENPATYITLSNIYANAGLWTE 518
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 15/152 (9%)
Query: 6 SSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR 65
S + S++V K +FN+ + + ++ SW S+I A+ G AL+ F S+
Sbjct: 332 SFAASALVHVYSKCGNTETARRVFNQ-MPRPDLVSWTSLIVGYAQNGQPDMALQFFESLL 390
Query: 66 KLSLTPTRSTFPCAIKSCS-------ALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMY 118
+ P TF + +C+ L HS K+ H G + +ID+
Sbjct: 391 RSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKH------GLVHTADHYACVIDLL 444
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
++ G +A + D +P + + W S+L G
Sbjct: 445 ARSGRFKEAENIIDNMPMKPDKFL-WASLLGG 475
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/668 (35%), Positives = 372/668 (55%), Gaps = 72/668 (10%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEAL-------RAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
DK N + ++++ + ++V+ L A + + P+ + I +C
Sbjct: 41 DKRNHLNPKDLVSEDNKFEEAVDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRH 100
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD-------------------- 126
L G++ H F VF+S+ L+DMY+KCG L D
Sbjct: 101 RALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMI 160
Query: 127 -----------ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG 175
ARKLFDE+PQ R+ SW + ++GYV ++ REAL LF+ +++ E
Sbjct: 161 VGYAKLGRLEQARKLFDEMPQ--RDNFSWNAAISGYVTHNQPREALELFR--VMQRHE-- 214
Query: 176 GASENSDNVFVDSVAIASVLS-ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYA 234
+S N F S A+A+ + C R + + HG++I+ + + V + L+D Y
Sbjct: 215 ---RSSSNKFTLSSALAASAAIPCLR-----LGKEIHGYLIRTELNLDEVVWSALLDLYG 266
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
+ G +D +R +FD M ++D V+W ++I ++G E +F +++S V+ N T +
Sbjct: 267 KCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQS-GVRPNEYTFA 325
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
VL A A LGK +H ++ + ++++ MY KCG +AR+ FN+M +
Sbjct: 326 GVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQP 385
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
++ SWT++I GY + + EAL F ++++G +P+ +T+V VLSAC+HAGLV +G +
Sbjct: 386 DLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYF 445
Query: 415 NTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
+++ + + +HY C++DLL R+G+ KEA ++I+ M VK D +W SLLG CRIH N
Sbjct: 446 HSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGN 505
Query: 475 VDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVE 534
++L + AAK L+E+EP N ++ L+NIYANAG W +V R M N + K PG S +E
Sbjct: 506 LELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIE 565
Query: 535 LRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIH 594
++ +VH FLVGD HP+ I+E+L EL+ K++E GYV D V+HDV++E+KE L H
Sbjct: 566 IKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYH 625
Query: 595 SEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDG 636
SEKLA NLR C DCHT I+ ISK+V R+I VRDS RFH F+DG
Sbjct: 626 SEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDG 685
Query: 637 LCSCGDYW 644
CSC DYW
Sbjct: 686 SCSCKDYW 693
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 105/237 (44%), Gaps = 17/237 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ D++ V SW ++I G E F + + + P TF + +C+
Sbjct: 277 IFDQMKDRD-VVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHA 335
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
H GK+ H G+ F SAL+ MYSKCG AR++F+E+ Q ++VSWTS+
Sbjct: 336 AEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQ--PDLVSWTSL 393
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV-TVNGV 206
+ GY QN EAL F E LL+ D V VLSAC+ V+
Sbjct: 394 IVGYAQNGQPDEALHFF-ELLLQSG-----------TKPDQVTYVGVLSACTHAGLVDKG 441
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
E H K G +ID AR G + + D M ++ D W S++
Sbjct: 442 LEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLG 498
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/638 (38%), Positives = 361/638 (56%), Gaps = 37/638 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +++ V SWN+++ A+ G EA F+ M ++P++ T A CS+L
Sbjct: 282 VFDRAAERD-VVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLR 340
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H A G RD+ + +AL+DMY++CG +AR LF IP N VSW +M
Sbjct: 341 ---FGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC---NAVSWNTM 394
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G Q + A+ LF+ LE G A + + + + +V S
Sbjct: 395 IAGSSQKGQMKRAVELFQRMQLE----GMAPVRATYLNL----LEAVASNPEEARAMAEG 446
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD-GMIEK--DAVTWNSIIAIY 264
H ++ G+ SE +G ++ YA G +D + F G +E D V+WN+II+
Sbjct: 447 RKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSL 506
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
+Q+G AL F +M V N +T AVL A A L G+ +HD + +E +
Sbjct: 507 SQHGHGKRALGFFRRM-DLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESN 565
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ V T++ MY +CG ++ AR+ F ++ E++V + AMIA Y + A EAL LF++M
Sbjct: 566 LFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQ 625
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ G RP+ +FVSVLSACSH GL EGW +M + I P +HY C VD+LGRAG L
Sbjct: 626 QEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWL 685
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
+A +LI M VK +VW +LLGACR +++VD G +A + EL+P + +V+LSNI
Sbjct: 686 ADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNIL 745
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A AG+W++ R+ M++R L K G S +E++ +VH F+ GD+ HP+ E+IY LE L+
Sbjct: 746 AGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLH 805
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------NLRVCGD 606
+++E+GYV D V+ VD+ EKE L HSE+LA NLRVC D
Sbjct: 806 AEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSSTDTVRVMKNLRVCED 865
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH + ISK+V++EIVVRD+ RFH+F DG CSCGDYW
Sbjct: 866 CHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 224/451 (49%), Gaps = 38/451 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF K + ++ SWN+ IA A+ GD AL F M+ + P R T A+ C+ +
Sbjct: 185 LFEKM--ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATI- 241
Query: 88 DLHSGKQAHQQAFIF---GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
+QA FI G + + VS+AL Y++ G L A+++FD + R++VSW
Sbjct: 242 -----RQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAE--RDVVSW 294
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
+ML Y Q+ + EA LLF L E + V + + + CS +
Sbjct: 295 NAMLGAYAQHGHMSEAALLFARMLHE------------GISPSKVTLVNASTGCSSLRFG 342
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
+ HG +++G D ++ +GN L+D Y R G + +R +F I +AV+WN++IA
Sbjct: 343 RMI---HGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFK-RIPCNAVSWNTMIAGS 398
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA----HLGVLRLGKCIHDQVIKMD 320
+Q G A+++F +M A L+ +L A+A + G+ +H +++
Sbjct: 399 SQKGQMKRAVELFQRMQLEGMAPVRATYLN-LLEAVASNPEEARAMAEGRKLHSRIVSCG 457
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQ--MKEK-NVRSWTAMIAGYGMHCRAREALD 377
+GT+++ MY CG +D A +F + M+++ +V SW A+I+ H + AL
Sbjct: 458 YASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALG 517
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
F +M GV PN IT V+VL AC+ A + EG + + H +E + + +
Sbjct: 518 FFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHS-GMESNLFVATALASMY 576
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
GR G L+ A ++ E + V+ D V++ +++ A
Sbjct: 577 GRCGSLESAREIFEKVAVERDVVIFNAMIAA 607
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 178/363 (49%), Gaps = 27/363 (7%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SW ++I G + A+ F M++ + TF +K+C+ L DL G+ H
Sbjct: 95 SWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWI 154
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G +++ L+ +Y CG ++ A LF+++ R++VSW + + Q+ +
Sbjct: 155 VESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME---RDLVSWNAAIAANAQSGDLGI 211
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
AL LF+ LE V + + L+ C+ + + H V + G
Sbjct: 212 ALELFQRMQLE------------GVRPARITLVIALTVCATIR---QAQAIHFIVRESGL 256
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+ + V L AYAR GH+ +++VFD E+D V+WN+++ YAQ+G +EA +F +
Sbjct: 257 EQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFAR 316
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGV--LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
M+ ++ S V L A G LR G+ IH ++ L+ +++G +++DMY +
Sbjct: 317 MLH------EGISPSKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTR 370
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
CG + AR F ++ N SW MIAG + + A++LF +M G+ P T++++
Sbjct: 371 CGSPEEARHLFKRIP-CNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNL 429
Query: 398 LSA 400
L A
Sbjct: 430 LEA 432
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 210/444 (47%), Gaps = 47/444 (10%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L G++ H + G ++ + L+ +Y KC L D ++F + +R+ SWT+++
Sbjct: 45 LSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRL--EVRDEASWTTII 100
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
T Y ++ A+ A+ +F E C D+V +VL AC+R+
Sbjct: 101 TAYTEHGQAKRAIGMFHRMQQEGVRC------------DAVTFLAVLKACARLGDLSQGR 148
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H ++++ G + + N L+ Y G V + +F+ M E+D V+WN+ IA AQ+G
Sbjct: 149 SIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSG 207
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
AL++F +M + V+ +TL ++A+ +R + IH V + LE++++V
Sbjct: 208 DLGIALELFQRM-QLEGVRPARITL---VIALTVCATIRQAQAIHFIVRESGLEQTLVVS 263
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
T++ Y + G + A++ F++ E++V SW AM+ Y H EA LF +M+ G+
Sbjct: 264 TALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIS 323
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLK 444
P+ +T V+ + CS M H +E G++ ++D+ R G +
Sbjct: 324 PSKVTLVNASTGCSSLR--------FGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPE 375
Query: 445 EAYDLIEGMKVKADFVVWGSLLGAC----RIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
EA L + ++ + V W +++ ++ + V+L +L + P Y LL
Sbjct: 376 EARHLFK--RIPCNAVSWNTMIAGSSQKGQMKRAVEL--FQRMQLEGMAPVRATYLNLLE 431
Query: 501 NIYANAGRWEDVERTRSLMKNRRL 524
+ +N E R++ + R+L
Sbjct: 432 AVASNP------EEARAMAEGRKL 449
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/637 (36%), Positives = 365/637 (57%), Gaps = 37/637 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF + + ++V S+N++I ++ G +A+ F M+ L PT TF + + L
Sbjct: 206 LFKEMPEIDSV-SYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLD 264
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D+ G+Q H F +VFVS+AL+D YSK + DARKLFDE+P++ + VS+ +
Sbjct: 265 DIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQ--DGVSYNVI 322
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY + + A LF+E + A++LS S +
Sbjct: 323 ISGYAWDGKHKYAFDLFRELQFTAFD------------RKQFPFATMLSIASNTLDWEMG 370
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H I DSE+ VGN+L+D YA+ G + + +F + + AV W ++I+ Y Q
Sbjct: 371 RQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQK 430
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G E L +F++M + V + T +++L A A + L LGK +H +IK +V
Sbjct: 431 GFYEEGLQLFNKM-RQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFS 489
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G++++D+Y KCG + A + F +M ++N+ SW AMI+ Y + A L F +M+ +G+
Sbjct: 490 GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGL 549
Query: 388 RPNYITFVSVLSACSHAGLVQEG-WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+P+ ++F+ VLSACSH+GLV+EG WH+ N+M + ++P EHY +VD+L R+G+ EA
Sbjct: 550 QPDSVSFLGVLSACSHSGLVEEGLWHF-NSMTQIYKLDPRREHYASVVDMLCRSGRFNEA 608
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP-NNCGYHVLLSNIYAN 505
L+ M + D ++W S+L ACRIHKN +L AA +LF +E + +V +SNIYA
Sbjct: 609 EKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAA 668
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
AG+WE+V + M++R + K P +S VE++ + H F D+ HPQ E+I + ++ L
Sbjct: 669 AGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKT 728
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++E+GY D + +H+ D++ K +L+ HSE+LA NLR C DC
Sbjct: 729 MEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDC 788
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H I++ISK+V REI VRDS RFH+F+DG CSCGD+W
Sbjct: 789 HAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 190/371 (51%), Gaps = 31/371 (8%)
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
H++ ++ +I Y K G L +ARKLFD + +R V+WT ++ GY Q + +EA LF
Sbjct: 80 HKNTVSTNMMISGYVKSGNLGEARKLFDGMVER--TAVTWTILIGGYSQLNQFKEAFELF 137
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
++ CG D V ++LS C+ + +IK G+DS +
Sbjct: 138 ----VQMQRCGTEP--------DYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLI 185
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
VGNTL+D+Y + +D++ ++F M E D+V++N++I Y+++GL +A+++F +M +++
Sbjct: 186 VGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEM-QNS 244
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+K T +AVL A L + LG+ IH VIK + +V V +++D Y K V A
Sbjct: 245 GLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDA 304
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
RK F++M E++ S+ +I+GY + + A DLF ++ F ++LS S+
Sbjct: 305 RKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNT 364
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHY-------GCMVDLLGRAGKLKEAYDLIEGMKVKA 457
W MG + + + V +VD+ + GK +EA + + ++
Sbjct: 365 ------LDW--EMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRS 416
Query: 458 DFVVWGSLLGA 468
V W +++ A
Sbjct: 417 A-VPWTAMISA 426
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/589 (38%), Positives = 345/589 (58%), Gaps = 36/589 (6%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
+ AI C L G+Q H + G+ +++++ L+ MY++CG L DA + D +P
Sbjct: 38 YDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMP 97
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+R N+VSWT+M++GY QN+ EA LF L E + +ASVL
Sbjct: 98 ER--NVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCE------------PNEFTLASVL 143
Query: 196 SAC--SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
++C S+ + H F IK+ F+ + VG++L+D YAR ++ +R+VFD + +D
Sbjct: 144 TSCTGSQGIHQHQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARD 203
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V++ +I++ Y + GL EAL++F Q+ + ++CN VT S +L A++ L + GK +H
Sbjct: 204 VVSYTTILSGYTRLGLDEEALNLFRQLY-NEGMQCNQVTFSVLLNALSGLSSMDYGKQVH 262
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+++ +L + + S+IDMY KCG++ +R+ F+ M E++V SW AM+ GYG H A
Sbjct: 263 GLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAY 322
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
E + LF M V+P+ +T ++VL SH GLV EG + + E + +HYGC+
Sbjct: 323 EVVQLFRFMCDK-VKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCV 381
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
+DLLGR+G+L++A LI+ M + +WGSLLGACR+H NV +GE A+KLF++EP N
Sbjct: 382 IDLLGRSGQLEKALLLIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENA 441
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
G +V+LSNIYA A W+DV R R LM + + K PG S + L +H F ++ HP+ E
Sbjct: 442 GNYVILSNIYAAARMWKDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKE 501
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------- 599
I + E+ ++ G+V D++ V+HDVD E+KE L HSEKLA
Sbjct: 502 DINVKINEIYAAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTI 561
Query: 600 ----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH + +SKV REI +RD RFH +G C+CGDYW
Sbjct: 562 QVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 610
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 35/221 (15%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V S+ ++++ R G EAL F + + + TF + + S L + GKQ H
Sbjct: 203 DVVSYTTILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVH 262
Query: 97 QQAFIFGFHRDVFVS--SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
I F++ ++LIDMYSKCG+L +R++FD +P+ R++VSW +ML GY ++
Sbjct: 263 --GLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPE--RSVVSWNAMLMGYGRH 318
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
A E + LF+ F+ D V DSV + +VL S HG +
Sbjct: 319 GMAYEVVQLFR-FM------------CDKVKPDSVTLLAVLLGYS-----------HGGL 354
Query: 215 IKRG---FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK 252
+ G FD V +TL++ G +D+ + G +EK
Sbjct: 355 VDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGR--SGQLEK 393
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/628 (37%), Positives = 368/628 (58%), Gaps = 36/628 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + SWN++I+ +E LR F MR+ + P T I +C AL D G
Sbjct: 256 MPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLG 315
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ H GF +V V+++LI M+S G +A +F ++ +++VSWT+M++GY
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKM--EFKDLVSWTAMISGYE 373
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+N +A+ + + + E E V D + IASVLSAC+ + + H
Sbjct: 374 KNGLPEKAV---ETYTIMEHE---------GVVPDEITIASVLSACAGLGLLDKGIMLHE 421
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
F + G S V V N+LID Y++ +D + +VF + K+ ++W SII N + E
Sbjct: 422 FADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFE 481
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL F QM+ S +K N+VTL +VL A A +G L GK IH ++ L + +++
Sbjct: 482 ALFFFQQMILS--LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALL 539
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY +CG+++ A FN EK+V SW ++ GY + A++LF+KMI++ V P+ I
Sbjct: 540 DMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEI 598
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF S+L ACS +G+V +G + +M H+F+I P ++HY +VDLLGRAG+L++AY+ I+
Sbjct: 599 TFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKK 658
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M + D +WG+LL ACRI++NV+LGE+AA+ +FE++ + GY++LL N+YA++G+W++V
Sbjct: 659 MPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEV 718
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R R +M+ RL PG S VE+ G+VHAFL GD HPQ ++I LE K++ G
Sbjct: 719 ARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLS 778
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
S D+D + E+ HSE+LA NL +C +CH ++ I
Sbjct: 779 MSKDSRRDDIDASKAEIFCG-HSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFI 837
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGD 642
SKVV R I VRD+++FH+FKDG+CSCGD
Sbjct: 838 SKVVRRGISVRDTEQFHHFKDGVCSCGD 865
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 244/443 (55%), Gaps = 28/443 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F K +++ +FSWN ++ A+ G EAL + M + + P TFPC +++C L
Sbjct: 151 VFGKMAERD-LFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLP 209
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL G++ H +GF DV V +ALI MY KCG++ AR +FD +P+R R +SW +M
Sbjct: 210 DLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDR--ISWNAM 267
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS--VAIASVLSACSRVTVNG 205
++GY +ND E L LF F++ E FVD + + SV+SAC +
Sbjct: 268 ISGYFENDVCLEGLRLF--FMMRE------------FFVDPDLMTMTSVISACEALGDER 313
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ HG+VIK GF +EV V N+LI ++ G D + VF M KD V+W ++I+ Y
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+NGL +A++ + M + V + +T+++VL A A LG+L G +H+ + L V
Sbjct: 374 KNGLPEKAVETYTIM-EHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYV 432
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
IV S+IDMY KC +D A + F+++ KNV SWT++I G ++ R+ EAL F +MI +
Sbjct: 433 IVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS 492
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY--GCMVDLLGRAGKL 443
++PN +T VSVLSAC+ G + G H G + + ++D+ R G++
Sbjct: 493 -LKPNSVTLVSVLSACARIGALSCG---KEIHAHALRTGLGFDGFLPNALLDMYVRCGRM 548
Query: 444 KEAYDLIEGMKVKADFVVWGSLL 466
+ A++ + D W LL
Sbjct: 549 EPAWNQFN--SCEKDVASWNILL 569
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 106/201 (52%), Gaps = 3/201 (1%)
Query: 207 TEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
+EG+ H +V K V +GN L+ + R G + + VF M E+D +WN ++ Y
Sbjct: 111 SEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGY 170
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
A+ G EAL+++ +M+ ++ + T VL L L G+ +H VI+ E
Sbjct: 171 AKAGYFDEALNLYHRML-WVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESD 229
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V V ++I MY KCG + AR F++M ++ SW AMI+GY + E L LF+ M +
Sbjct: 230 VDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMRE 289
Query: 385 AGVRPNYITFVSVLSACSHAG 405
V P+ +T SV+SAC G
Sbjct: 290 FFVDPDLMTMTSVISACEALG 310
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/612 (40%), Positives = 347/612 (56%), Gaps = 60/612 (9%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGF--HRDVFVSSALIDMYSKCGELSDARKLFDE 133
+P + SC L+ L Q H Q + GF H + + LI++YS + AR +FD
Sbjct: 55 YPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSI---THLINLYSLFHKCDLARSVFDS 108
Query: 134 IPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS--VAI 191
P R + W SM+ Y ++ EAL ++ + E GG + VF+ + V +
Sbjct: 109 TPNPSR--ILWNSMIRAYTRSKQYNEALEMYYCMV----EKGGLERD---VFIGAGLVDM 159
Query: 192 ASVLSACSRV-----------------TVNGVTEGAHGFVIKRGFDSEVGVGN----TLI 230
S + R + G+++ +V +R FD V + T++
Sbjct: 160 YSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMM 219
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
YA G ++FD M + VTWN IIA Y QNG A EA+ F QM + + N+
Sbjct: 220 AGYAHNGCFVEVLELFDKM-KLGNVTWNVIIAAYMQNGHAKEAISSFHQM-RLENFHPNS 277
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
VT +VL A A+L R G H +I+M + +VG S+IDMY KCGQ+D + K FN+
Sbjct: 278 VTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNE 337
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
M K+ SW AM++GY +H A+ LF M ++ V+ + ++FVSVLSAC HAGLV+EG
Sbjct: 338 MDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEG 397
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
++M +++I+P +EHY CMVDLLGRAG E I+ M V+ D VWG+LLG+CR
Sbjct: 398 RKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCR 457
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
+H NV LGE+A L +LEP N + V+LS+IYA +GRW D + RS M + L KTPG
Sbjct: 458 MHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGC 517
Query: 531 SLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMT 590
S VEL+ KVHAF VGDK HPQ E ++ L K++++GYV D + V+ +V++E+KEM
Sbjct: 518 SWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMF 577
Query: 591 LRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHY 632
L HSE+LA NLRVC DCHT + ISK+ R I+VRD+ RFH+
Sbjct: 578 LYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHH 637
Query: 633 FKDGLCSCGDYW 644
F+DG+CSC DYW
Sbjct: 638 FEDGICSCNDYW 649
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 248/663 (37%), Positives = 366/663 (55%), Gaps = 68/663 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHS 91
+ + NV SW S+I AR + +A+ F M R +TP T C I +C+ L DL +
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 92 GKQAHQQAFI--FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
G++ + AFI G + + SAL+DMY KC + A++LFDE N+ +M +
Sbjct: 255 GEKVY--AFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGAS--NLDLCNAMAS 310
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
YV+ REAL +F L+ +S V D +++ S +S+CS++ +
Sbjct: 311 NYVRQGLTREALGVFN--LMMDS----------GVRPDRISMLSAISSCSQLRNILWGKS 358
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG- 268
HG+V++ GF+S + N LID Y + D + ++FD M K VTWNSI+A Y +NG
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 269 ------------------------------LAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
L EA++VF M V + VT+ ++
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
A HLG L L K I+ + K ++ V +GT+++DM+ +CG + A FN + ++V +
Sbjct: 479 ACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 538
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
WTA I M A A++LF MI+ G++P+ + FV L+ACSH GLVQ+G +M
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSML 598
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
+ P HYGCMVDLLGRAG L+EA LIE M ++ + V+W SLL ACR+ NV++
Sbjct: 599 KLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
AA+K+ L P G +VLLSN+YA+AGRW D+ + R MK + L K PG S +++RGK
Sbjct: 659 AYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGK 718
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
H F GD+ HP+ I L+E++ + +G+V D+++V+ DVD++EK L HSEKL
Sbjct: 719 THEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKL 778
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVC DCH+ + SKV +REI++RD+ RFHY + G CSC
Sbjct: 779 AMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSC 838
Query: 641 GDY 643
GD+
Sbjct: 839 GDF 841
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 241/496 (48%), Gaps = 61/496 (12%)
Query: 7 SSVSSVVSNVDKHSTNTNLTTLFNKYVDKNN-----VFSWNSVIADLARGGDSVEALRAF 61
S+++ +V+ + T +L+ F K V +N+ F +NS+I A G EA+ F
Sbjct: 65 STITKLVARSCELGTRESLS--FAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF 122
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
M ++P + TFP + +C+ +G Q H G+ +D+FV ++L+ Y++C
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 182
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
GEL ARK+FDE+ + RN+VSWTSM+ GY + D A++A+ LF + +E
Sbjct: 183 GELDSARKVFDEMSE--RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE--------- 231
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
V +SV + V+SAC+++ E + F+ G + + + L+D Y + +DV
Sbjct: 232 --VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
++++FD + N++ + Y + GL EAL VF+ M+ S V+ + +++ + + + +
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS-GVRPDRISMLSAISSCS 348
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC----------------------- 338
L + GK H V++ E + ++IDMY KC
Sbjct: 349 QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS 408
Query: 339 --------GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM-IKAGVRP 389
G+VD A + F M EKN+ SW +I+G EA+++F M + GV
Sbjct: 409 IVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA 468
Query: 390 NYITFVSVLSACSHAG---LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+ +T +S+ SAC H G L + ++++ G + ++ G +VD+ R G + A
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTT----LVDMFSRCGDPESA 524
Query: 447 YDLIEGMKVKADFVVW 462
+ + + D W
Sbjct: 525 MSIFNSLTNR-DVSAW 539
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 212/427 (49%), Gaps = 36/427 (8%)
Query: 72 TRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG---ELSDAR 128
T++T P ++K+C + +L K H+ G DV + L+ + G LS A+
Sbjct: 32 TKAT-PSSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAK 87
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
++F E + + S++ GY + EA+LLF + + + D
Sbjct: 88 EVF-ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMM------------NSGISPDK 134
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
LSAC++ G HG ++K G+ ++ V N+L+ YA G +D +RKVFD
Sbjct: 135 YTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDE 194
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M E++ V+W S+I YA+ A +A+D+F +MV+ +V N+VT+ V+ A A L L
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
G+ ++ + +E + ++ ++++DMY KC +D+A++ F++ N+ AM + Y
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
REAL +F M+ +GVRP+ I+ +S +S+CS + G H + + G E
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG-----KSCHGYVLRNGFE 369
Query: 429 HY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI-AAK 483
+ ++D+ + + A+ + + M K V W S++ V+ GE+ AA
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVAG-----YVENGEVDAAW 423
Query: 484 KLFELEP 490
+ FE P
Sbjct: 424 ETFETMP 430
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 178/374 (47%), Gaps = 32/374 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++Y +N+ N++ ++ R G + EAL F+ M + P R + AI SCS L
Sbjct: 293 LFDEY-GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLR 351
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ GK H GF + +ALIDMY KC A ++FD + + +V+W S+
Sbjct: 352 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK--TVVTWNSI 409
Query: 148 LTGYVQNDNAREALLLFKEF-------------------LLEES-ECGGASENSDNVFVD 187
+ GYV+N A F+ L EE+ E + ++ + V D
Sbjct: 410 VAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNAD 469
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
V + S+ SAC + + + + ++ K G +V +G TL+D ++R G + + +F+
Sbjct: 470 GVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ +D W + I A G A A+++FD M++ +K + V L A +H G+++
Sbjct: 530 SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ-GLKPDGVAFVGALTACSHGGLVQ 588
Query: 308 LGKCIHDQVIKMD--LEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIA 364
GK I ++K+ E V G ++D+ + G ++ A + M E N W +++A
Sbjct: 589 QGKEIFYSMLKLHGVSPEDVHYGC-MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLA 647
Query: 365 GYGMHCRAREALDL 378
CR + +++
Sbjct: 648 A----CRVQGNVEM 657
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 258/732 (35%), Positives = 382/732 (52%), Gaps = 101/732 (13%)
Query: 5 KSSSVSSVVSNVDKHST--NTNLT--TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
+ + + + + HS+ N+NL F + + +N++I + D A+
Sbjct: 77 RQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIEL 136
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSAL-HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
F + + P TF + + + + D +Q H G V +AL+ ++
Sbjct: 137 FRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFV 196
Query: 120 KCGE---------LSDARKLFDEIPQRIRNIVSWTSMLTGYVQN---DNAREALLLFKE- 166
KC ++ ARKLFDE+ +R + +SWT+M+ GYV+N D AR+ L E
Sbjct: 197 KCASSPLVSSSSLMAAARKLFDEMTER--DELSWTTMIAGYVRNGELDAARQFLDGMTEK 254
Query: 167 ----------------FLLEESECGGASENSDNVFV-----DSVAIASVLSACSRVTVNG 205
F LE A E +++ D SVLSAC+
Sbjct: 255 LVVAWNAMISGYVHHGFFLE------ALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFL 308
Query: 206 VTEGAHGFVIK----RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSII 261
+ H ++++ D + V N L Y + G VD +R+VF+ M KD V+WN+I+
Sbjct: 309 HGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAIL 368
Query: 262 AIY-------------------------------AQNGLAAEALDVFDQMVKSTDVKCNA 290
+ Y AQNG E+L +F++M C+
Sbjct: 369 SGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCD- 427
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
+ ++A A L L G+ +H Q++++ + S+ G ++I MY KCG V+ A F
Sbjct: 428 YAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLT 487
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
M + SW AMIA G H +AL+LF M+K + P+ ITF++VLS CSHAGLV+EG
Sbjct: 488 MPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEG 547
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
+ +M + I PG +HY M+DLL RAGK EA D+IE M V+ +W +LL CR
Sbjct: 548 HRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCR 607
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
IH N+DLG AA++LFEL P + G +VLLSN+YA GRW+DV + R LM+++ + K PG
Sbjct: 608 IHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGC 667
Query: 531 SLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMT 590
S +E+ KVH FLV D HP+ + +Y YLEEL +K++++GY+ D V+HD++ E+KE
Sbjct: 668 SWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYV 727
Query: 591 LRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHY 632
L HSEKLA NLR+CGDCH + +SKVV+REIVVRD KRFH+
Sbjct: 728 LSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHH 787
Query: 633 FKDGLCSCGDYW 644
FK+G CSCG+YW
Sbjct: 788 FKNGECSCGNYW 799
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 187/407 (45%), Gaps = 47/407 (11%)
Query: 2 KLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
+LS ++ ++ V N + + L + K V +WN++I+ G +EAL F
Sbjct: 225 ELSWTTMIAGYVRNGELDAARQFLDGMTEKLV-----VAWNAMISGYVHHGFFLEALEMF 279
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIF------GFHRDVFVSSALI 115
M L + T+ + +C+ GKQ H A+I + V++AL
Sbjct: 280 RKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVH--AYILRTEPRPSLDFSLSVNNALA 337
Query: 116 DMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF-------- 167
+Y KCG++ +AR++F+++P ++++VSW ++L+GYV EA F+E
Sbjct: 338 TLYWKCGKVDEARQVFNQMP--VKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTW 395
Query: 168 --LLEESECGGASENSDNVFVD---------SVAIASVLSACSRVTVNGVTEGAHGFVIK 216
++ G E S +F A A + AC+ + H +++
Sbjct: 396 TVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVR 455
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
GFDS + GN LI YA+ G V+ + +F M D+V+WN++IA Q+G A+AL++
Sbjct: 456 LGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALEL 515
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG----TSII 332
F+ M+K D+ + +T VL +H G++ G H M + G +I
Sbjct: 516 FELMLKE-DILPDRITFLTVLSTCSHAGLVEEG---HRYFKSMSGLYGICPGEDHYARMI 571
Query: 333 DMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
D+ C+ G+ A+ M E W A++AG CR +DL
Sbjct: 572 DLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAG----CRIHGNMDL 614
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/663 (35%), Positives = 375/663 (56%), Gaps = 36/663 (5%)
Query: 2 KLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
K S + ++S+++ K + LF++ + +N V SW++++ G+ +E L F
Sbjct: 57 KDSDITQINSLINLYSKCGQSKCARKLFDRMLQRN-VVSWSALMMGYLHKGEVLEVLGLF 115
Query: 62 SSMRKL-SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
++ L S P F + C+ + GKQ H G +V +ALI MYS+
Sbjct: 116 RNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSR 175
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
C + A ++ D +P ++ S+ S+L+ V++ EA + K + EC
Sbjct: 176 CFHVDSAMQILDTVPGD--DVFSYNSILSALVESGCRGEAAQVLKRMV---DEC------ 224
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
V DSV SVL C+++ + H ++K G +V V +TLID Y + G V
Sbjct: 225 ---VIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVL 281
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+RK FDG+ +++ V W +++ Y QNG E L++F +M + D + N T + +L A
Sbjct: 282 NARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKM-ELEDTRPNEFTFAVLLNAC 340
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
A L L G +H +++ + +IVG ++I+MY K G +D + F+ M ++V +W
Sbjct: 341 ASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWN 400
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
AMI GY H ++AL +F M+ AG PNY+TF+ VLSAC H LVQEG+++ + + +
Sbjct: 401 AMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKK 460
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE-GMKVKADFVVWGSLLGACRIHKNVDLGE 479
F++EPG+EHY CMV LLGRAG L EA + ++ +VK D V W +LL AC IH+N +LG+
Sbjct: 461 FDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGK 520
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
+ + +++P++ G + LLSN++A A +W+ V + R LMK R + K PG S +++R
Sbjct: 521 QITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNT 580
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
H F+ HP+ +I+E +++L ++ +GY D+ V+HDV+ E+KE L HSEKLA
Sbjct: 581 HVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLA 640
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLR+C DCH ++LISK +R I+VRD+ RFH+F++GLC+C
Sbjct: 641 LAYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCN 700
Query: 642 DYW 644
D+W
Sbjct: 701 DHW 703
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/655 (36%), Positives = 379/655 (57%), Gaps = 35/655 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+++V+ K + N ++F K+ V SWNS+I+ L EA+ F +M++ +
Sbjct: 495 NALVNMYGKCTAIDNACSVFQLMPSKDTV-SWNSMISGLDHNERFEEAVSCFHTMKRNGM 553
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P+ + + SCS+L L G+Q H + F +G DV VS+AL+ +Y++ +++ +K
Sbjct: 554 VPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQK 613
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F ++P+ + VSW S + + + ++L ++ LE + G + V
Sbjct: 614 VFFQMPEY--DQVSWNSFIGALAKYE---ASVLQALKYFLEMMQAGWRP--------NRV 660
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
++L+A S +V G+ H ++K + + N L+ Y + ++ +F M
Sbjct: 661 TFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRM 720
Query: 250 IEK-DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
E+ D V+WNS+I+ Y +G+ +A+D+ M++ K + T + VL A A + L
Sbjct: 721 SERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQ-KLDGFTFATVLSACASVATLER 779
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
G +H ++ LE V+VG++++DMY KCG++D A + F M +N+ SW +MI+GY
Sbjct: 780 GMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYAR 839
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H ++AL +F +M + G P+++TFV VLSACSH GLV EG+ +MG + + P +E
Sbjct: 840 HGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIE 899
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA-CRIH-KNVDLGEIAAKKLF 486
H+ CMVDLLGRAG +K+ D I+ M + + ++W ++LGA CR + +N +LG+ AAK L
Sbjct: 900 HFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLI 959
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
ELEP N +VLLSN++A G WEDV R M+ + K G S V ++ VH F+ GD
Sbjct: 960 ELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGD 1019
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
+ HP+ EKIYE L+EL K+++ GYV + ++D++ E KE L HSEKLA
Sbjct: 1020 QTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTR 1079
Query: 600 ----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCHT + ISK+V R+I++RDS RFH+F G+CSCGDYW
Sbjct: 1080 KSELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 214/451 (47%), Gaps = 25/451 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ KN V SW+ +I+ + EA F + L P A+++C
Sbjct: 197 LFDEMPQKNLV-SWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCG 255
Query: 88 D--LHSGKQAHQQAFIFGFH--RDVFVSSALIDMYSKC-GELSDARKLFDEIPQRIRNIV 142
+ G Q H AFI D+ +S+ L+ MYS C G + DA ++FDEI + RN V
Sbjct: 256 STGIKLGMQIH--AFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEI--KFRNSV 311
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
+W S+++ Y + +A A LF +E E ++ V A L+ C V
Sbjct: 312 TWNSIISVYCRRGDAVSAFKLFSVMQMEGVELN--LRPNEYTLCSLVTAACSLADCGLVL 369
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ E + K GF ++ VG+ L++ +AR G +D ++ +F M +++AVT N ++
Sbjct: 370 L----EQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMV 425
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL----RLGKCIHDQVIK 318
A+ EA VF +M ++ N+ +L +L L R G+ +H + +
Sbjct: 426 GLARQHQGEEAAKVFKEMKDLVEI--NSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFR 483
Query: 319 MDLEESVI-VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
L ++ I +G ++++MY KC +D A F M K+ SW +MI+G + R EA+
Sbjct: 484 SGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVS 543
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
F+ M + G+ P+ + +S LS+CS G + G ++ G ++ ++ V ++ L
Sbjct: 544 CFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG-RQIHGEGFKWGLDLDVSVSNALLTLY 602
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ E + M + D V W S +GA
Sbjct: 603 AETDSINECQKVFFQMP-EYDQVSWNSFIGA 632
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 199/403 (49%), Gaps = 41/403 (10%)
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
K+ S+L+D H Q + GF DVF + LI++Y + G L ARKLFDE+PQ +N
Sbjct: 151 KTSSSLYD---ANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQ--KN 205
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
+VSW+ +++GY QN EA LFK + S + + A+ S L AC +
Sbjct: 206 LVSWSCLISGYTQNRMPDEACSLFKGVI------------SSGLLPNHFAVGSALRACQQ 253
Query: 201 VTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYAR-GGHVDVSRKVFDGMIEKDAVTW 257
G+ G H F+ K S++ + N L+ Y+ G +D + +VFD + +++VTW
Sbjct: 254 CGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTW 313
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVK---STDVKCNAVTLSAVLLA---IAHLGVLRLGKC 311
NSII++Y + G A A +F M +++ N TL +++ A +A G++ L +
Sbjct: 314 NSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQM 373
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
+ ++ K + VG+++++ + + G +D A+ F QM ++N + ++ G +
Sbjct: 374 L-TRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQ 432
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN--------I 423
EA +F +M K V N + V +LS + ++EG G E + +
Sbjct: 433 GEEAAKVFKEM-KDLVEINSESLVVLLSTFTEFSNLKEG----KRKGQEVHAYLFRSGLV 487
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ + +V++ G+ + A + + M K D V W S++
Sbjct: 488 DARISIGNALVNMYGKCTAIDNACSVFQLMPSK-DTVSWNSMI 529
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 149/308 (48%), Gaps = 25/308 (8%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H + K GF +V NTLI+ Y R G++ +RK+FD M +K+ V+W+ +I+ Y QN +
Sbjct: 163 HLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMP 222
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV--LRLGKCIHDQVIKMDLEESVIVG 328
EA +F ++ S+ + N + + L A G ++LG IH + K+ +I+
Sbjct: 223 DEACSLFKGVI-SSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILS 281
Query: 329 TSIIDMYCKC-GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++ MY C G +D A + F+++K +N +W ++I+ Y A A LF M GV
Sbjct: 282 NVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGV 341
Query: 388 ----RPNYITFVS-VLSACSHAG----LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
RPN T S V +ACS A L+++ + G ++ G +V+
Sbjct: 342 ELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVG----SALVNGFA 397
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL----EPNNCG 494
R G + A + + M + + G ++G R H+ GE AAK E+ E N+
Sbjct: 398 RYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQ----GEEAAKVFKEMKDLVEINSES 453
Query: 495 YHVLLSNI 502
VLLS
Sbjct: 454 LVVLLSTF 461
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/664 (37%), Positives = 375/664 (56%), Gaps = 54/664 (8%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M + S + ++S K+ + +F+ + + NV SW S++ + G EA +
Sbjct: 78 MPQRNTVSFNGMISGYVKNGMVADARKVFD-VMPERNVVSWTSMVRGYVQEGMVEEAEKL 136
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F M P R+ + L + S ++ F +DV V + +I Y +
Sbjct: 137 FWEM------PRRNVVSWTVMIGGLLKE--SRIDDAKKLFDMIPEKDVVVVTNMIGGYCQ 188
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
G L +AR+LFDE+ ++RN+ +WT+M++GY +N A LF E + E +E
Sbjct: 189 VGRLDEARELFDEM--KVRNVFTWTTMVSGYAKNGRVDVARKLF-EVMPERNE------- 238
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVG-NTLIDAYARGGHV 239
V A+ + R+ F + + V N +I + G +
Sbjct: 239 -----VSWTAMLMGYTQSGRMK--------EAFELFEAMPVKWIVACNEMILQFGLAGEM 285
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+R +F+GM E+D TWN++I ++ + GL EAL +F +M + V N ++ +VL
Sbjct: 286 HRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARM-QREGVALNFPSMISVLSV 344
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A L L G+ +H ++++ + ++ + V + +I MY KCG + A+ FN+ K+V W
Sbjct: 345 CASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMW 404
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
+MI GY H EAL++F+ M +GV+P+ +TF+ VLSACS++G V+EG+ M
Sbjct: 405 NSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKC 464
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
+ +EPG+EHY CMVDLLGRAG++ EA +L+E M ++ D +VWG+LLGACR H +DL E
Sbjct: 465 TYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAE 524
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
+A +KL +LEP N G +VLLS++YA GRW DVE R + NRR+ K PG S +E+ KV
Sbjct: 525 VAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKI-NRRVIKFPGCSWIEVEKKV 583
Query: 540 HAFLVGD-KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
H F GD K HP+ I + LE+L+ L+E GY D + V+HDVD+EEK +L HSE+L
Sbjct: 584 HMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERL 643
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVCGDCH+ I+LI+KV REI++RD+ RFH+FKDG CSC
Sbjct: 644 AVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSC 703
Query: 641 GDYW 644
D+W
Sbjct: 704 KDFW 707
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 172/404 (42%), Gaps = 75/404 (18%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
TL + V ++ S S I+ R GD A + F + + P R T SA
Sbjct: 7 ATLRCRMVQARSLCSNTSAISRYGRIGDIHNARKVFDN----TPLPQR-TIASWNAMVSA 61
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ H + A F R+ + +I Y K G ++DARK+FD +P+R N+VSWT
Sbjct: 62 YFESHKPRDA-LLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPER--NVVSWT 118
Query: 146 SMLTGYVQNDNAREALLLFKEF--------------LLEESECGGASENSDNVFVDSVAI 191
SM+ GYVQ EA LF E LL+ES A + D + V +
Sbjct: 119 SMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVV 178
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN-----TLIDAYARGGHVDVSRKVF 246
+ + + G + + FD E+ V N T++ YA+ G VDV+RK+F
Sbjct: 179 VTNM-------IGGYCQVGRLDEARELFD-EMKVRNVFTWTTMVSGYAKNGRVDVARKLF 230
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ M E++ V+W +++ Y Q+G EA ++F+ M V CN + L L
Sbjct: 231 EVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGL--------- 281
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
G++ AR F MKE++ +W AMI +
Sbjct: 282 -------------------------------AGEMHRARMMFEGMKERDEGTWNAMIKVF 310
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
EAL LF +M + GV N+ + +SVLS C+ + G
Sbjct: 311 ERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHG 354
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/629 (38%), Positives = 359/629 (57%), Gaps = 75/629 (11%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS-TFPCAIKSCSALHDLHSGKQA 95
+VF N++I LA +L F MR+ P S +F +K+ ++ L SG Q
Sbjct: 69 DVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQL 128
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H QA + G +FV + L+ MYS+CG ++ A+K+F+E+ + N+V+W +
Sbjct: 129 HCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEP--NVVAWNA--------- 177
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
V++AC R G +GA
Sbjct: 178 --------------------------------------VVTACFRC---GDVKGADMMFN 196
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+ F + + N ++ Y + G ++++RK+F M KD V+W+++I +A NG EA
Sbjct: 197 RMPFRN-LTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFG 255
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
F ++ + ++ N V+L+ L A A G + GK +H + K V V +++D Y
Sbjct: 256 FFREL-QQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTY 314
Query: 336 CKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
KCG V +AR F +M EK ++ SWT+MIAG MH EA+ LF++M ++G+RP+ I F
Sbjct: 315 SKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAF 374
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
+S+L ACSHAGL+++G+ + M +NIEP +EHYGCMVDL GRAG+L +AY+ I M
Sbjct: 375 ISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMP 434
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
V ++W +LLGAC IH NV L E ++L EL+PNN G HVLLSNIYA AG+W+DV
Sbjct: 435 VLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAA 494
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG-YVT 573
R M ++R+ KTPG+S++E+ +++F+ G+ ++ E+ YE L+E+ +KL+ G Y+
Sbjct: 495 VRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIP 554
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
++ SV+HD++ EEKE ++ HSEKLA NLRVC DCHTV++LIS
Sbjct: 555 EVGSVLHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLIS 614
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
KV EIVVRD RFH FK G CSC DYW
Sbjct: 615 KVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 123/246 (50%), Gaps = 22/246 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF + K++V SW+++I A G EA F ++++ + P + A+ +C+
Sbjct: 225 LFLEMPVKDDV-SWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAG 283
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ GK H GF V V++AL+D YSKCG + AR +F+ +P++ R+IVSWTSM
Sbjct: 284 AIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEK-RSIVSWTSM 342
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G + EA+ LF E +EES + D +A S+L ACS G+
Sbjct: 343 IAGLAMHGYGEEAIQLFHE--MEES----------GIRPDGIAFISILYACSHA---GLI 387
Query: 208 EGAHGFVIKRG--FDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
E + + K ++ E + + ++D Y R G +D + + M + A+ W +++
Sbjct: 388 EKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLG 447
Query: 263 IYAQNG 268
+ +G
Sbjct: 448 ACSIHG 453
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 133/347 (38%), Gaps = 76/347 (21%)
Query: 211 HGFVIKRGFDSEVGVGNTLI--DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H +V K G D++ + L+ A + +D +R++F D N++I A++
Sbjct: 25 HAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTLIRGLAESD 84
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
+L F +M + ++ + + +L A A L G +H Q I L+ + VG
Sbjct: 85 TPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHLFVG 144
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNV-------------------------------R 357
T+++ MY +CG V A+K F +M E NV
Sbjct: 145 TTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFRNLT 204
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMI-------------------------------KAG 386
SW M+AGY A LF +M + G
Sbjct: 205 SWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVG 264
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRAGK 442
+RPN ++ LSAC+ AG ++ G + H F + G V ++D + G
Sbjct: 265 MRPNEVSLTGALSACADAGAIEFG-----KILHGFIEKSGFLWMVSVNNALLDTYSKCGN 319
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
+ A + E M K V W S++ +H GE A + E+E
Sbjct: 320 VGMARLVFERMPEKRSIVSWTSMIAGLAMH---GYGEEAIQLFHEME 363
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/541 (40%), Positives = 330/541 (60%), Gaps = 19/541 (3%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
+NVF WN +I + S +LR +S M +L + T TFP +K+C L D G +A
Sbjct: 63 SNVFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARA 122
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H +FG+ DVFV+++L+ MY + G +R++F+ +P+R N+VSW+SM+ Y N
Sbjct: 123 HAHVVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFERMPER--NVVSWSSMVGAYAHNG 180
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
E LLLF L E G + N S+++A + + + VI
Sbjct: 181 RYEEGLLLFWRMLNE-----GIAPNR----------GSIVNAMACIHREHEADDFCRVVI 225
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
G DS+ V N + YAR G +DV+R+ F G+++KD V W S+I Y Q L AL+
Sbjct: 226 DNGLDSDQSVQNAAMGMYARCGRIDVARRFFYGILDKDLVAWTSMIEAYVQADLPINALE 285
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F QM K + ++VTL +++ A+++L +L + +H + + + + + T++ID+Y
Sbjct: 286 LFKQM-KLLGIVPDSVTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLY 344
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG ++ ARK F++M +N+ SW+ MI+GYGMH REAL LF +M KA ++P++I FV
Sbjct: 345 VKCGNLEYARKCFDRMSARNLISWSTMISGYGMHGHGREALCLFDQM-KASIKPDHIAFV 403
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
VLSACSH GL+ EGW M +F + P EHY CMVDLLGRAG+L EA IE M +
Sbjct: 404 MVLSACSHGGLIAEGWECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPI 463
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
D VWG+LLGACRIH N++ E AA+ LF L+ N G ++LLSNIYA++G+ ++ +
Sbjct: 464 TPDAGVWGALLGACRIHSNLETAETAARHLFNLDAENPGRYILLSNIYASSGKRKEADDI 523
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
R+LMK+R + KT G +++E++ KV+ F+ GD +PQ + IY L +L ++QE GYV D+
Sbjct: 524 RALMKSRGVRKTVGHTIIEIKNKVYTFVAGDTSNPQTDLIYSELRKLMDRIQEAGYVPDL 583
Query: 576 T 576
+
Sbjct: 584 S 584
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 21/345 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW+S++ A G E L F M + P R + + + + +H H
Sbjct: 161 MPERNVVSWSSMVGAYAHNGRYEEGLLLFWRMLNEGIAPNRGSI---VNAMACIHREHEA 217
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ G D V +A + MY++CG + AR+ F I +++V+WTSM+ YV
Sbjct: 218 DDFCRVVIDNGLDSDQSVQNAAMGMYARCGRIDVARRFFYGILD--KDLVAWTSMIEAYV 275
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q D AL LFK+ L + DSV + S++ A S + + HG
Sbjct: 276 QADLPINALELFKQMKLL------------GIVPDSVTLLSLIHAVSNLASFQLARFVHG 323
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ + F + + + +ID Y + G+++ +RK FD M ++ ++W+++I+ Y +G E
Sbjct: 324 VITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRMSARNLISWSTMISGYGMHGHGRE 383
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSI 331
AL +FDQM S +K + + VL A +H G++ G +C + +
Sbjct: 384 ALCLFDQMKAS--IKPDHIAFVMVLSACSHGGLIAEGWECFKAMNRDFGVTPRTEHYACM 441
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREA 375
+D+ + G++ A+ +M + W A++ +H A
Sbjct: 442 VDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGACRIHSNLETA 486
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 12/163 (7%)
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K +H ++K L + TS+I Y G + A F+ NV W +I +
Sbjct: 21 KSLHASILKSHLHPHLC--TSLIAQYASLGSISHAYALFSTSHSSNVFLWNHIIRAFSNT 78
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE----FNIEP 425
+R +L L+ +M++ G++ TF +L AC + L H F E
Sbjct: 79 PHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFE-----LGARAHAHVVVFGYES 133
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
V ++ + GR G + + E M + + V W S++GA
Sbjct: 134 DVFVANSLMAMYGRFGCFDFSRQVFERMPER-NVVSWSSMVGA 175
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/605 (37%), Positives = 346/605 (57%), Gaps = 34/605 (5%)
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM 117
LR + L PT + I +C+ +L ++ H F D F+ ++LI +
Sbjct: 36 LRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHL 95
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
Y KCG + +ARK+FDE+ R +++VSWTS++ GY QND EA+ L L + G
Sbjct: 96 YCKCGSVLEARKVFDEM--RRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNG- 152
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
AS+L A +G+ H +K + +V VG+ L+D YAR G
Sbjct: 153 -----------FTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCG 201
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
+D++ VFD + K+ V+WN++I+ +A+ G AL F +M+++ + T S+V
Sbjct: 202 MMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRN-GFEATHFTYSSVF 260
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
+IA LG L GK +H +IK + + G +++DMY K G + ARK F+++ +K++
Sbjct: 261 SSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLV 320
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
+W M+ + + +EA+ F +M K+G+ N +TF+ +L+ACSH GLV+EG + M
Sbjct: 321 TWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMM 380
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
E+++EP ++H+ +V LLGRAG L A I M ++ VWG+LL ACR+HKN +
Sbjct: 381 -KEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKV 439
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG 537
G+ AA +FEL+P++ G VLL NIYA+ G+W+ R R +MK + K P S VE+
Sbjct: 440 GQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMEN 499
Query: 538 KVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
VH F+ D HP+ E+IY+ +++ K+++ GYV DM V+ VD +E+E L+ HSEK
Sbjct: 500 SVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEK 559
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA N+R+CGDCH+ + ISKV REIVVRD+ RFH+F +G CS
Sbjct: 560 LALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSNGSCS 619
Query: 640 CGDYW 644
C DYW
Sbjct: 620 CADYW 624
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 171/340 (50%), Gaps = 16/340 (4%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ ++ SW S+IA A+ EA+ M K P TF +K+ A D G+Q
Sbjct: 114 RKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQ 173
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H A +H DV+V SAL+DMY++CG + A +FD++ +N VSW ++++G+ +
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDS--KNGVSWNALISGFARK 231
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+ AL+ F E L E +SV S+ +R+ + H +
Sbjct: 232 GDGETALMTFAEMLRNGFE------------ATHFTYSSVFSSIARLGALEQGKWVHAHM 279
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
IK GNTL+D YA+ G + +RKVFD + +KD VTWN+++ +AQ GL EA+
Sbjct: 280 IKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAV 339
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
F++M KS + N VT +L A +H G+++ GK + + + DLE + +++ +
Sbjct: 340 SHFEEMRKS-GIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVAL 398
Query: 335 YCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAR 373
+ G ++ A +M E W A++A MH A+
Sbjct: 399 LGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAK 438
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 162/385 (42%), Gaps = 73/385 (18%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
T +F+K KN V SWN++I+ AR GD AL F+ M + T T+ S +
Sbjct: 207 TAVFDKLDSKNGV-SWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIAR 265
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L L GK H F + L+DMY+K G + DARK+FD + +++V+W
Sbjct: 266 LGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDD--KDLVTWN 323
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+MLT + Q +EA+ F+E ++++ V +L+ACS +
Sbjct: 324 TMLTAFAQYGLGKEAVSHFEEM------------RKSGIYLNQVTFLCILTACSHGGL-- 369
Query: 206 VTEGAHGFVIKRGFDSEVGVGN--TLIDAYARGGHVDVSRK-VFDGMIEKDAVTWNSIIA 262
V EG F + + +D E + + T++ R G ++ + +F IE A W +++A
Sbjct: 370 VKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLA 429
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
+ + NA ++G+ D V ++D +
Sbjct: 430 --------------------ACRMHKNA----------------KVGQFAADHVFELDPD 453
Query: 323 ESVIVGTSII--DMYCKCGQVDLARKAFNQMKEKNVR-----SWTAM-------IAGYGM 368
+S G ++ ++Y GQ D A + MK V+ SW M +A
Sbjct: 454 DS---GPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDT 510
Query: 369 HCRAREALDLFYKMIKAGVRPNYIT 393
H RA E ++ ++ K + Y+
Sbjct: 511 HPRAEEIYKMWGQISKKIRKEGYVP 535
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/729 (33%), Positives = 394/729 (54%), Gaps = 116/729 (15%)
Query: 9 VSSVVSNVDKHSTNTNLTT-LFNKYVDKNNVFSWNSVIADLARGG-DSVEALRAFSSMRK 66
++S+V+ ++ H + LF++ + F +++ + +R G D F MR+
Sbjct: 39 LNSLVNCLEPHPLHLRYALHLFDRM--PPSTFLFDTALRACSRAGSDPHRPFLLFRRMRR 96
Query: 67 LSLTPTRSTF------------PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSAL 114
+ P TF P ++ C+ LH A FVS++L
Sbjct: 97 AGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAA--------PFVSNSL 148
Query: 115 IDMYSKCGELSDARKLFDEIPQR-----------------------------IRNIVSWT 145
I MY + G +DAR+ FDEI + +R+++SWT
Sbjct: 149 IHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWT 208
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
S++ Y + + AREA+ FK L S + D V + +VLSAC+++
Sbjct: 209 SLIAAYSRANRAREAVGCFKTML------------SHGIAPDEVTVIAVLSACAKLKDLE 256
Query: 206 VTEGAHGFVIKRGFDSE--------------------------VGVG------NTLIDAY 233
+ H V ++G + +G G N +ID Y
Sbjct: 257 LGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGY 316
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ GHVDV+R +FD M +D +T+NS++ Y +G EAL +F M + D++ + T+
Sbjct: 317 CKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSM-RRHDLRVDNFTV 375
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
+L A A LG L+ G+ +H + + +E + +GT+++DMY KCG+VD A F +M +
Sbjct: 376 VNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGK 435
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
++V +WTAMIAG + + AL+ FY+M G +PN +++++VL+ACSH+ L+ EG +
Sbjct: 436 RDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLY 495
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
+ M +NI P +EHYGCM+DLLGR+G L EA DL++ M ++ + V+W S+L ACR+HK
Sbjct: 496 FDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHK 555
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
++DL + AA+ L +LEP+ G +V L NIY ++ +WE+ + R LM+ R++ KT G+S +
Sbjct: 556 HIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSI 615
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
+ G+VH F+V DK HP+ +I LEE++ +L+ +GY + + DVD+EEKE L
Sbjct: 616 TVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLA 675
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSEKLA NLRVC DCH+ I+LIS++ +REI+VRD RFH+F++
Sbjct: 676 HSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFRE 735
Query: 636 GLCSCGDYW 644
G CSC D+W
Sbjct: 736 GTCSCNDFW 744
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/593 (38%), Positives = 354/593 (59%), Gaps = 44/593 (7%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC-----GELSDARKL 130
F ++ CS+ + KQ I G D SS+ + C G+LS A +
Sbjct: 4 FNLLLQKCSSFSQI---KQLQANLIING---DFHFSSSRTKLLELCAISSFGDLSYALHI 57
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F IP N W +++ G + + A+ ++ A+ N + +D++
Sbjct: 58 FRYIPYPSTN--DWNAVIRGTALSSDPANAVFWYRAM---------AASNGLHR-IDALT 105
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+ L AC+R H +++ GF+++V + TL+DAYA+ G +D+++K+FD M
Sbjct: 106 CSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMP 165
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+ D +WN++IA +AQ A+A+ F +M +++ NAVT+ LLA + LG L+ G+
Sbjct: 166 QPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGE 225
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+H +++ L+ +V V +IDMY KCG +D A F M+ +K++ +W MI + MH
Sbjct: 226 SVHKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMH 285
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
+ALDLF K+ ++G+ P+ +++++VL AC+HAGLV++G N+M +EP ++H
Sbjct: 286 GDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQR-GLEPNIKH 344
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
YG MVDLLGRAG+LKEAYD++ + + V+W +LLGACR + +V++ E+A++KL E+
Sbjct: 345 YGSMVDLLGRAGRLKEAYDIVSSLPFP-NMVLWQTLLGACRTYGDVEMAELASRKLVEMG 403
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
+CG VLLSN+YA RW+DV R R M+ R + KTPGFS +E++GK++ F+ GD+ H
Sbjct: 404 FISCGXFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSH 463
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
+IY L+E+N++++ GY D ++V+HD+ E+KE L HSEKLA
Sbjct: 464 SSCREIYAKLDEINLRIKAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEE 523
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCH VI+LISK+ REI+VRD RFH FK+GLCSC DYW
Sbjct: 524 GTPIQVIKNLRICGDCHVVIKLISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 172/338 (50%), Gaps = 17/338 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC--AIKSCSALHD 88
+Y+ + WN+VI A D A+ + +M + C A+K+C+
Sbjct: 59 RYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALA 118
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
Q H Q FGF+ DV + + L+D Y+K G+L A+KLFDE+PQ +I SW +++
Sbjct: 119 RSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQ--PDIASWNALI 176
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
G+ Q +A++ FK ++ N+ ++V + L ACS++ E
Sbjct: 177 AGFAQGSRPADAIMTFKRMKVD-----------GNLRPNAVTVQGALLACSQLGALKEGE 225
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQN 267
H ++++ DS V V N +ID YA+ G +D + VF+ M +K +TWN++I +A +
Sbjct: 226 SVHKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMH 285
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G +ALD+F+++ +S + +AV+ AVL A H G++ G + + + + LE ++
Sbjct: 286 GDGHKALDLFEKLGRS-GMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQRGLEPNIKH 344
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
S++D+ + G++ A + + N+ W ++
Sbjct: 345 YGSMVDLLGRAGRLKEAYDIVSSLPFPNMVLWQTLLGA 382
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 118/238 (49%), Gaps = 19/238 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSAL 86
LF++ + + ++ SWN++IA A+G +A+ F M+ +L P T A+ +CS L
Sbjct: 160 LFDE-MPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQL 218
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G+ H+ +V V + +IDMY+KCG + A +F+ + + +++++W +
Sbjct: 219 GALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYWVFENM-RCDKSLITWNT 277
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ + + + +AL LF++ G S S D+V+ +VL AC+ + V
Sbjct: 278 MIMAFAMHGDGHKALDLFEKL--------GRSGMSP----DAVSYLAVLCACNHAGL--V 323
Query: 207 TEGAHGF--VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+G F + +RG + + +++D R G + + + + + V W +++
Sbjct: 324 EDGLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPFPNMVLWQTLLG 381
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/667 (35%), Positives = 360/667 (53%), Gaps = 76/667 (11%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
F+ V++N ++W+++IA L+ GG ++A A + P+++ + C
Sbjct: 281 FFDGMVERNE-YTWSTMIAALSHGG-RIDAAIAVYGRDPVKSIPSQTALLTGLARC---- 334
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVS-SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
G+ + + VS +A+I Y + G + +A++LFD +P RN +SW
Sbjct: 335 ----GRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMP--FRNTISWAG 388
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ GY QN + EAL L + + + + ++ S ACS +
Sbjct: 389 MIAGYAQNGRSEEALDLLQAL------------HRNGMLPSLSSLTSSFLACSHIGALET 436
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H +K G V N LI Y + +++ R+VF+ M KD V+WNS IA Q
Sbjct: 437 GRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQ 496
Query: 267 NGLAAEALDVFDQMVKSTDV-------------------------------KCNAVTLSA 295
N + +A +FD M+ S DV K N+ L+
Sbjct: 497 NNMLEDARHIFDNML-SRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTI 555
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
+L LG +LG+ IH IK ++ +IV +++ MY KCG D + K F+ M+E++
Sbjct: 556 LLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERD 614
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
+ +W I G H REA+ ++ M GV PN +TFV +L+ACSHAGLV EGW +
Sbjct: 615 IFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFK 674
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
+M ++ + P +EHY CMVDLLGR G ++ A I M ++ D V+W +LLGAC+IHKN
Sbjct: 675 SMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNA 734
Query: 476 DLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVEL 535
++G AA+KLF EP+N G +V+LSNIY++ G W +V R +MK R ++K PG S +++
Sbjct: 735 EIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQI 794
Query: 536 RGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHS 595
R KVH+F+ GDK+H + E+I L++L L+ GYV D V+HD+D+E+KE +L HS
Sbjct: 795 RNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHS 854
Query: 596 EKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGL 637
EKLA NLR+CGDCHT I+ +S V R+I +RD RFH+F++G
Sbjct: 855 EKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGS 914
Query: 638 CSCGDYW 644
CSCGD+W
Sbjct: 915 CSCGDFW 921
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 220/445 (49%), Gaps = 50/445 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC-AIKSCSALH-DLH 90
+ NV + +++ AR G ++A R F M P R+T A+ SC + D+
Sbjct: 90 ISGGNVRTATILLSGYARLGRVLDARRVFDGM------PERNTVAWNAMVSCYVQNGDIT 143
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
++ F RDV ++++ Y ++ DA LF ++PQR N+V+WT M++G
Sbjct: 144 MARRL----FDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQR--NLVTWTVMISG 197
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
YV+ + + +F+ E GAS + N ASVLSA + + GV E
Sbjct: 198 YVRIEQHGKGWDIFRMMHHE-----GASPDQSN-------FASVLSAVTGLQDLGVLEVL 245
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYAR-GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
V+K GF+S+V +G ++++ Y R +D++ K FDGM+E++ TW+++IA + G
Sbjct: 246 RPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGR 305
Query: 270 AAEALDVFDQ-MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
A+ V+ + VKS + +T G+ R G+ +++ + + ++V
Sbjct: 306 IDAAIAVYGRDPVKSIPSQTALLT-----------GLARCGRITEARILFEQIPDPIVVS 354
Query: 329 -TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++I Y + G VD A++ F++M +N SW MIAGY + R+ EALDL + + G+
Sbjct: 355 WNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGM 414
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE--HYGC--MVDLLGRAGKL 443
P+ + S ACSH G ++ G H ++ G + Y C ++ + G+ +
Sbjct: 415 LPSLSSLTSSFLACSHIGALETG-----RQVHSLAVKAGCQFNSYVCNALISMYGKCRNM 469
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGA 468
+ + M+VK D V W S + A
Sbjct: 470 EYVRQVFNRMRVK-DTVSWNSFIAA 493
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 191/419 (45%), Gaps = 30/419 (7%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFN--KYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
S V+S S V + + + +N K + + N+ +W +I+ R + F
Sbjct: 153 PSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFR 212
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK-C 121
M +P +S F + + + L DL + GF DV + ++++++Y++
Sbjct: 213 MMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDA 272
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
L A K FD + +R N +W++M+ A+ ++ +
Sbjct: 273 SALDIAIKFFDGMVER--NEYTWSTMIAALSHGGRIDAAIAVY-------------GRDP 317
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
A+ + L+ C R+T + + ++ D V N +I Y + G VD
Sbjct: 318 VKSIPSQTALLTGLARCGRITEARI-------LFEQIPDPIVVSWNAMITGYMQNGMVDE 370
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
++++FD M ++ ++W +IA YAQNG + EALD+ Q + + + +L++ LA +
Sbjct: 371 AKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLL-QALHRNGMLPSLSSLTSSFLACS 429
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
H+G L G+ +H +K + + V ++I MY KC ++ R+ FN+M+ K+ SW +
Sbjct: 430 HIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNS 489
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
IA + +A +F M+ V +++ +++SA + A E + TM HE
Sbjct: 490 FIAALVQNNMLEDARHIFDNMLSRDV----VSWTTIISAYAQAERGDEAVEFFKTMLHE 544
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 167/388 (43%), Gaps = 63/388 (16%)
Query: 112 SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
SA I ++ G L +AR++FD +P R +I++W SM++ Y + +A +LF +
Sbjct: 37 SARIRELARLGRLREAREVFDAMPHR--DIIAWNSMISAYCNSGMLEDARILF------D 88
Query: 172 SECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLID 231
+ GG + + + VL A R +G+ E N ++
Sbjct: 89 AISGGNVRTATILLSGYARLGRVLDA--RRVFDGMPE------------RNTVAWNAMVS 134
Query: 232 AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
Y + G + ++R++FD M +D +WNS++ Y + +A ++F QM + V +
Sbjct: 135 CYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVM 194
Query: 292 ------------------------------TLSAVLLAIAHLGVLRLGKCIHDQVIKMDL 321
++VL A+ L L + + + V+K
Sbjct: 195 ISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGF 254
Query: 322 EESVIVGTSIIDMYCK-CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
E V++GTSI+++Y + +D+A K F+ M E+N +W+ MIA R A+ ++
Sbjct: 255 ESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYG 314
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+ + P+ ++ L+ C G + E + E +P V + M+ +
Sbjct: 315 RDPVKSI-PSQTALLTGLARC---GRITEA-----RILFEQIPDPIVVSWNAMITGYMQN 365
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGA 468
G + EA +L + M + + + W ++
Sbjct: 366 GMVDEAKELFDRMPFR-NTISWAGMIAG 392
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 28/269 (10%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M++ + S +S ++ + +++ + +F+ + ++ V SW ++I+ A+ EA+
Sbjct: 479 MRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRD-VVSWTTIISAYAQAERGDEAVEF 537
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F +M P + C L G+Q H A G ++ V++AL+ MY K
Sbjct: 538 FKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFK 597
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG +D+ K+FD + + R+I +W + +TG Q+ REA+ +++
Sbjct: 598 CG-CADSHKVFDSMEE--RDIFTWNTFITGCAQHGLGREAIKMYEHM------------E 642
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTL------IDAYA 234
S V + V +L+ACS + V EG F + + G+ L +D
Sbjct: 643 SVGVLPNEVTFVGLLNACSHAGL--VDEGWQFF---KSMSRDYGLTPLLEHYACMVDLLG 697
Query: 235 RGGHVDVSRK-VFDGMIEKDAVTWNSIIA 262
R G V + K ++D IE D V W++++
Sbjct: 698 RTGDVQGAEKFIYDMPIEPDTVIWSALLG 726
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/624 (36%), Positives = 356/624 (57%), Gaps = 35/624 (5%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SWN++++ L + +AL F M+ P + + I + +L GK+ H A
Sbjct: 316 SWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYA 375
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G ++ + + L+DMY+KC + F+ + ++ +++SWT+++ GY QN+ E
Sbjct: 376 IRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEK--DLISWTTIIAGYAQNEFHLE 433
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+ LF++ ++ + VD + I SVL ACS + HG+V KR
Sbjct: 434 AINLFRKVQVKGMD------------VDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL 481
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+++ + N +++ Y GH+D +R+ F+ + KD V+W S+I NGL EAL++F
Sbjct: 482 -ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYS 540
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
+ K T+++ +++ + + L A A+L L+ GK IH +I+ + +S++DMY CG
Sbjct: 541 L-KQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCG 599
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
V+ +RK F+ +K++++ WT+MI GMH +A+ LF KM V P++ITF+++L
Sbjct: 600 TVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLY 659
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
ACSH+GL+ EG + M + + +EP EHY CMVDLL R+ L+EAY + M +K
Sbjct: 660 ACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSS 719
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
+W +LLGAC IH N +LGE+AAK+L + + N G + L+SNI+A GRW DVE R M
Sbjct: 720 EIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRM 779
Query: 520 KNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV-GYVTDMTSV 578
K L K PG S +E+ K+H F+ DK HPQ + IY L + L++ GY+ V
Sbjct: 780 KGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFV 839
Query: 579 IHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
H+V +EEK L HSE+LA NLR+C DCHT ++ S+V R
Sbjct: 840 FHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDDCHTFFKIASEVSQR 899
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
+VVRD+ RFH+F+ GLCSCGD+W
Sbjct: 900 PLVVRDANRFHHFERGLCSCGDFW 923
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 224/438 (51%), Gaps = 18/438 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +FSWN+++ G +EA+ + MR L + TFP +K+C AL + G
Sbjct: 105 MSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLG 164
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H A G+ VFV +ALI MY KCG+L AR LFD I + VSW S+++ +V
Sbjct: 165 AEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV 224
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N EAL LF+ E G AS ++ + L + + G HG
Sbjct: 225 AEGNCLEALSLFRRM----QEVGVAS--------NTYTFVAALQGVEDPSFVKLGMGIHG 272
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V+K ++V V N LI YA+ G ++ + +VF+ M+ +D V+WN++++ QN L ++
Sbjct: 273 AVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSD 332
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL+ F M +++ K + V++ ++ A G L GK +H I+ L+ ++ +G +++
Sbjct: 333 ALNYFRDM-QNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLV 391
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KC V AF M EK++ SWT +IAGY + EA++LF K+ G+ + +
Sbjct: 392 DMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPM 451
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE-PGVEHYGCMVDLLGRAGKLKEAYDLIE 451
SVL ACS GL + G+ F + + +V++ G G + A E
Sbjct: 452 MIGSVLRACS--GLKSRNF-IREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFE 508
Query: 452 GMKVKADFVVWGSLLGAC 469
++ K D V W S++ C
Sbjct: 509 SIRSK-DIVSWTSMITCC 525
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 204/416 (49%), Gaps = 33/416 (7%)
Query: 60 AFSSMRKLSL----TPTR--STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSA 113
AF S+ LS TP+R + C A L G+Q H A + H F+++
Sbjct: 27 AFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAAKALPQGQQLH--ALLLKSHLSAFLATK 84
Query: 114 LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
L+ MY KCG L DA K+FDE+ + R I SW +++ +V + EA+ L+K+ +
Sbjct: 85 LVLMYGKCGSLRDAVKVFDEMSE--RTIFSWNALMGAFVSSGKYLEAIELYKDMRVL--- 139
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY 233
V +D+ SVL AC + + + HG +K G+ V V N LI Y
Sbjct: 140 ---------GVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMY 190
Query: 234 ARGGHVDVSRKVFDG-MIEK-DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
+ G + +R +FDG M+EK D V+WNSII+ + G EAL +F +M + V N
Sbjct: 191 GKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRM-QEVGVASNTY 249
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
T A L + ++LG IH V+K + V V ++I MY KCG+++ A + F M
Sbjct: 250 TFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESM 309
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
++ SW +++G + +AL+ F M +G +P+ ++ +++++A +G + +G
Sbjct: 310 LCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGK 369
Query: 412 H---WLNTMGHEFNIEPG---VEHYG--CMVDLLGRAGKLKEAYDLIEGMKVKADF 459
+ G + N++ G V+ Y C V +G A + DLI + A +
Sbjct: 370 EVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGY 425
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 17/191 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ ++ SW S+I G VEAL F S+++ ++ P A+ + + L L G
Sbjct: 510 IRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKG 569
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H GF + ++S+L+DMY+ CG + ++RK+F + Q R+++ WTSM+
Sbjct: 570 KEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQ--RDLILWTSMINANG 627
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ +A+ LFK+ NV D + ++L ACS + + EG
Sbjct: 628 MHGCGNKAIALFKKM------------TDQNVIPDHITFLALLYACSHSGL--MVEGKRF 673
Query: 213 F-VIKRGFDSE 222
F ++K G+ E
Sbjct: 674 FEIMKYGYQLE 684
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L G+ +H ++K L S + T ++ MY KCG + A K F++M E+ + SW A++
Sbjct: 62 LPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGA 119
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
+ + EA++L+ M GV + TF SVL AC G + G H ++
Sbjct: 120 FVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEI-----HGVAVKC 174
Query: 426 GVEHY----GCMVDLLGRAGKLKEAYDLIEG-MKVKADFVVWGSLLGA 468
G + ++ + G+ G L A L +G M K D V W S++ A
Sbjct: 175 GYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/666 (35%), Positives = 369/666 (55%), Gaps = 75/666 (11%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +++ V SWN +++ L++ G EAL M+ + +T+ ++ +C+ L
Sbjct: 226 LFDSMPERD-VVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLS 284
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GKQ H Q D +V+SAL+++Y+KCG +A+ +F+ + R N V+WT +
Sbjct: 285 SLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDR--NNVAWTVL 342
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G++Q+ E++ LF + ++ + +D A+A+++S C +
Sbjct: 343 IAGFLQHGCFTESVELFNQM------------RAELMTLDQFALATLISGCCSRMDLCLG 390
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARG------------------------------- 236
H +K G V V N+LI YA+
Sbjct: 391 RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQV 450
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G++ +R+ FDGM K+ +TWN+++ Y Q+G + L +++ M+ DV+ + VT +
Sbjct: 451 GNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTL 510
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
A LG +LG I + +K+ L V ++I MY KCG++ ARK F+ + K++
Sbjct: 511 FKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDI 570
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW AMI GY H ++A+++F ++K G +P+YI++V+VLS CSH+GLVQEG + +
Sbjct: 571 VSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDM 630
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M NI PG+EH+ CMVDLLGRAG L EA DLI+ M +K VWG+LL AC+IH N +
Sbjct: 631 MKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNE 690
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
L E+AAK +FEL+ + G ++L++ IYA+AG+ +D + R LM+++ + K PG+S +E+
Sbjct: 691 LAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVN 750
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
KVH F D HPQ I + L+EL K+ +GYV D E+ HSE
Sbjct: 751 NKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGYVR--------TDSPRSEIH---HSE 799
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLR+CGDCHTVI+LIS V RE V+RD+ RFH+F G C
Sbjct: 800 KLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFHHFNGGSC 859
Query: 639 SCGDYW 644
SCGDYW
Sbjct: 860 SCGDYW 865
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 226/492 (45%), Gaps = 60/492 (12%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSAL 86
LF + + +V SWN++++ + + +L +F SM R +P TF A+KSC AL
Sbjct: 93 LFGR-MPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGAL 151
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ Q FG D V++AL+DM+ +CG + A +LF I + I S
Sbjct: 152 GERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKE--PTIFCRNS 209
Query: 147 MLTGYVQNDNAREALLLFKEFLLEE-----------SECGGASE--------NSDNVFVD 187
ML GYV+ AL LF + S+ G E S V +D
Sbjct: 210 MLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLD 269
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
S S L+AC+R++ + H VI+ + V + L++ YA+ G ++ VF+
Sbjct: 270 STTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFN 329
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ +++ V W +IA + Q+G E++++F+QM ++ + + L+ ++ L
Sbjct: 330 SLHDRNNVAWTVLIAGFLQHGCFTESVELFNQM-RAELMTLDQFALATLISGCCSRMDLC 388
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKC----------------------------- 338
LG+ +H +K ++V+V S+I MY KC
Sbjct: 389 LGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHS 448
Query: 339 --GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI-KAGVRPNYITFV 395
G + AR+ F+ M KNV +W AM+ Y H + L ++ M+ + VRP+++T+V
Sbjct: 449 QVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYV 508
Query: 396 SVLSACSHAGLVQEGWHWLN-TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
++ C+ G + G + T+ ++ V + ++ + + G++ EA + + +
Sbjct: 509 TLFKGCADLGANKLGDQIIGRTVKVGLILDTSVAN--AVITMYSKCGRILEARKVFDFLN 566
Query: 455 VKADFVVWGSLL 466
VK D V W +++
Sbjct: 567 VK-DIVSWNAMI 577
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 127/531 (23%), Positives = 217/531 (40%), Gaps = 96/531 (18%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK----- 129
F A++SC A L + H + G VF+ + L+ Y CG L DAR+
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65
Query: 130 ---------------------------LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
LF +P R++ SW ++++GY Q+ +L
Sbjct: 66 IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPA--RDVASWNTLMSGYFQSQQYLASL- 122
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE 222
E + G +S N + A + +C + + G V K G +
Sbjct: 123 ---ESFVSMHRSGDSSPN-------AFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDD 172
Query: 223 VGVGNTLIDAYARGGHVDVSRK-------------------------------VFDGMIE 251
V L+D + R G VD++ + +FD M E
Sbjct: 173 SDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPE 232
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
+D V+WN +++ +Q+G EALD+ M +S V+ ++ T ++ L A A L LR GK
Sbjct: 233 RDVVSWNMMVSALSQSGRVREALDMVVDM-QSKGVRLDSTTYTSSLTACARLSSLRWGKQ 291
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
+H QVI+ V ++++++Y KCG A+ FN + ++N +WT +IAG+ H
Sbjct: 292 LHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGC 351
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSA-CSHAGLVQEGWHWLNTMGHEFNIEPG---- 426
E+++LF +M + + +++S CS L L H ++ G
Sbjct: 352 FTESVELFNQMRAELMTLDQFALATLISGCCSRMDLC------LGRQLHSLCLKSGQIQA 405
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA-AKKL 485
V ++ + + L+ A + M K D V W S++ A H V G IA A++
Sbjct: 406 VVVSNSLISMYAKCDNLQSAESIFRFMNEK-DIVSWTSMITA---HSQV--GNIAKAREF 459
Query: 486 FE-LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVEL 535
F+ + N + Y G ED R ++M + + + + V L
Sbjct: 460 FDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTL 510
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/604 (38%), Positives = 349/604 (57%), Gaps = 41/604 (6%)
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSK 120
S +L+L + C +K C +L + KQ H Q FG D F SS+++ S
Sbjct: 22 SSSELNLKQKEQEYLCLVKKCKSLEEF---KQVHVQILKFGLFLDSFCSSSVLATCALSD 78
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
+ A +F ++ + + +M+ GYV N N A+ L+ + L E E
Sbjct: 79 WNSMDYACSIFQQLDEP--TTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVE------- 129
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGH 238
D+ VL AC+R+ V + EG HG V K G + +V V N+LI+ Y +
Sbjct: 130 -----PDNFTYPVVLKACARLAV--IQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKCRD 182
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
+++S +F M +K +W++IIA +A + E L +F+ M + + L VL
Sbjct: 183 IEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALFEDMSREGCWRAEESILVNVLS 242
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
A HLG LG+C H ++K E +V V TS++DMY KCG + F M KN S
Sbjct: 243 ACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQLS 302
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
++ +I+G G+H R+AL +F +M++ G+ P+ +T+VSVLSACSH+GLV EG + M
Sbjct: 303 YSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDKMK 362
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
E+ IEP ++HYGCMVDL GRAG L+EA+ L++ M +KA+ V+W SLL AC++H N+ LG
Sbjct: 363 FEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPIKANDVLWRSLLSACKVHDNLKLG 422
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
EIAA+ LF L +N +++LSN+YA A +WE+ + R+ M NR L +TPG+SLVE++ K
Sbjct: 423 EIAAENLFRLSSHNPSDYLVLSNMYARAQQWENAAKIRTKMINRGLIQTPGYSLVEVKSK 482
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
V+ F+ DK + + IY+ + ++ +L+ GY+ D + V+ DVD+EEK L+ HS+KL
Sbjct: 483 VYKFVSQDKSYCKSGNIYKMIHQMEWQLRFEGYMPDTSQVMLDVDEEEKGERLKGHSQKL 542
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLR+C DCH+ +L+S + +REI VRD RFH+FKDG CSC
Sbjct: 543 AIAFALIHTSQGSAIRIIRNLRMCNDCHSYTKLVSMIYEREITVRDRNRFHHFKDGNCSC 602
Query: 641 GDYW 644
DYW
Sbjct: 603 RDYW 606
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 182/369 (49%), Gaps = 24/369 (6%)
Query: 6 SSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR 65
SSSV + + D +S + + + +D+ F +N++I + A+ ++ M
Sbjct: 67 SSSVLATCALSDWNSMDYACSIF--QQLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDML 124
Query: 66 KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
+ + P T+P +K+C+ L + G Q H F G DV+V ++LI+MY KC ++
Sbjct: 125 QREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKCRDIE 184
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
+ +F + Q +++ SW++++ + E L LF++ + C A E+
Sbjct: 185 MSCAIFRRMEQ--KSVASWSAIIAAHASLAMWWECLALFED--MSREGCWRAEES----- 235
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+ +VLSAC+ + + AHG ++K + V V +L+D Y + G + +
Sbjct: 236 ----ILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMDMYVKCGSLQKGLCL 291
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F M K+ ++++ II+ +G +AL +F +MV+ ++ + VT +VL A +H G+
Sbjct: 292 FQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEE-GLEPDDVTYVSVLSACSHSGL 350
Query: 306 LRLGKCIHDQV-IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS----WT 360
+ G + D++ + +E ++ ++D+ G+ L +AF ++ +++ W
Sbjct: 351 VDEGLDLFDKMKFEYRIEPTMQHYGCMVDLK---GRAGLLEEAFQLVQSMPIKANDVLWR 407
Query: 361 AMIAGYGMH 369
++++ +H
Sbjct: 408 SLLSACKVH 416
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/634 (37%), Positives = 366/634 (57%), Gaps = 39/634 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGD---SVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDL 89
++ NV SWNS+I ++ D + E LR K+ + T + C
Sbjct: 359 TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEV--TLLNVLPVCEEEIQF 416
Query: 90 HSGKQAHQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
K+ H A GF D V++A + Y+KCG L A +F + ++ + SW +++
Sbjct: 417 LKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKM--VSSWNALI 474
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
G+VQN R+AL L+ L+ S + D IAS+LSAC+R+ +
Sbjct: 475 GGHVQNGFPRKALDLY--LLMRGS----------GLEPDLFTIASLLSACARLKSLSCGK 522
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
HG +++ GF+ + + +L+ Y + G + +++ FD M EK+ V WN++I ++QN
Sbjct: 523 EIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNE 582
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
+ALD+F QM+ S+ + + +++ L A + + LRLGK +H +K L E V
Sbjct: 583 FPFDALDMFHQML-SSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVT 641
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
S+IDMY KCG ++ ++ F+++ K +W +I GYG+H R+A++LF M AG R
Sbjct: 642 CSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFR 701
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+ +TF+++L+AC+HAGLV EG +L M F I+P +EHY C+VD+LGRAG+L EA +
Sbjct: 702 PDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALE 761
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
L+ + K D +W SLL +CR ++++D+GE A KL EL P+ +VL+SN YA G+
Sbjct: 762 LVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGK 821
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
W++V + R MK L K G S +E+ GKV FLVGD+ Q KI + EL K+ +
Sbjct: 822 WDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINK 881
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
+GY D + V+H+++++EK LR HSEKLA NLR+C DCH
Sbjct: 882 IGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNA 941
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+L+SK+ REI+VRD+KRFH+FK+G CSCGDYW
Sbjct: 942 IKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 220/440 (50%), Gaps = 29/440 (6%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGK 93
+ N+F WN++++ R +A+ F M L+ P T PC IK+C ++D+ G+
Sbjct: 157 RKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGE 216
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H A DVFV +ALI MY K G + A K+FD++PQ RN+VSW S++ ++
Sbjct: 217 AVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQ--RNLVSWNSVMYACLE 274
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N E+ LFK G + + D + +V+ C+R + HG
Sbjct: 275 NGVFEESYGLFK----------GLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGL 324
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+K G E+ V ++L+D Y++ G++ +R +FD EK+ ++WNS+I Y+++ A
Sbjct: 325 ALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTN-EKNVISWNSMIGGYSKDRDFRGA 383
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVL-LAIAHLGVLRLGKCIHDQVIKMDLEES-VIVGTSI 331
++ +M VK N VTL VL + + L+L K IH ++ +S +V +
Sbjct: 384 FELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKL-KEIHGYALRHGFIQSDELVANAF 442
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ Y KCG + A F M+ K V SW A+I G+ + R+ALDL+ M +G+ P+
Sbjct: 443 VAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDL 502
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTM---GHEFNIEPGVEHYGC--MVDLLGRAGKLKEA 446
T S+LSAC+ + G +M G E ++ + C +V L + GK+ A
Sbjct: 503 FTIASLLSACARLKSLSCGKEIHGSMLRNGFE------LDEFICISLVSLYVQCGKILLA 556
Query: 447 YDLIEGMKVKADFVVWGSLL 466
+ M+ K + V W +++
Sbjct: 557 KLFFDNMEEK-NLVCWNTMI 575
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 170/328 (51%), Gaps = 23/328 (7%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFG---FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
++ C ++ G++ H FI F DV + + L+ MYS C D+ +F+
Sbjct: 100 LQLCGEYKNIEIGRKIHN--FISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFN--AS 155
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV-DSVAIASVL 195
R +N+ W ++L+GY++N R+A+ +F E + S FV D+ + V+
Sbjct: 156 RRKNLFLWNALLSGYLRNSLFRDAVFVFVEMI------------SLTEFVPDNFTLPCVI 203
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
AC V + E HGF +K S+V VGN LI Y + G V+ + KVFD M +++ V
Sbjct: 204 KACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLV 263
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTD-VKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
+WNS++ +NG+ E+ +F ++ + + + T+ V+ A G +RLG H
Sbjct: 264 SWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHG 323
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
+K+ L + V +S++DMY KCG + AR F+ EKNV SW +MI GY R
Sbjct: 324 LALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRG 382
Query: 375 ALDLFYKM-IKAGVRPNYITFVSVLSAC 401
A +L KM ++ V+ N +T ++VL C
Sbjct: 383 AFELLRKMQMEDKVKVNEVTLLNVLPVC 410
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 135/281 (48%), Gaps = 6/281 (2%)
Query: 191 IASVLSACSRVTVNGVTEGAHGFV-IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
I +L C + H F+ F ++V + L+ Y+ S VF+
Sbjct: 96 IGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNAS 155
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
K+ WN++++ Y +N L +A+ VF +M+ T+ + TL V+ A + +RLG
Sbjct: 156 RRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLG 215
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
+ +H +K + V VG ++I MY K G V+ A K F++M ++N+ SW +++ +
Sbjct: 216 EAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLEN 275
Query: 370 CRAREALDLFYKMIKA--GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
E+ LF ++ G+ P+ T V+V+ C+ G V+ G + + + + + +
Sbjct: 276 GVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVF-HGLALKLGLCGEL 334
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ ++D+ + G L EA L + + + + W S++G
Sbjct: 335 KVNSSLLDMYSKCGYLCEARVLFD--TNEKNVISWNSMIGG 373
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 28/246 (11%)
Query: 25 LTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCS 84
L LF +++ N+ WN++I ++ +AL F M + P + A+ +CS
Sbjct: 555 LAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACS 614
Query: 85 ALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
+ L GK+ H A FV+ +LIDMY+KCG + ++ +FD + ++ V+W
Sbjct: 615 QVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRV--HLKGEVTW 672
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++TGY + + R+A+ LFK S + DSV ++L+AC+ +
Sbjct: 673 NVLITGYGIHGHGRKAIELFK------------SMQNAGFRPDSVTFIALLTACNHAGL- 719
Query: 205 GVTEGAHG-------FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK-DAVT 256
V EG F IK + V +D R G ++ + ++ + + +K D+
Sbjct: 720 -VAEGLEYLGQMQSLFGIKPKLEHYACV----VDMLGRAGRLNEALELVNELPDKPDSRI 774
Query: 257 WNSIIA 262
W+S+++
Sbjct: 775 WSSLLS 780
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/638 (36%), Positives = 360/638 (56%), Gaps = 41/638 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW+++++ GD +L FS M + + P TF +K+C L+ L G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H GF V V ++L+DMYSKCG +++A K+F I R +++SW +M+ G+V
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDR--SLISWNAMIAGFV 184
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+AL F G E + D + S+L ACS + + HG
Sbjct: 185 HAGYGSKALDTF----------GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 213 FVIKRGF--DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
F+++ GF S + +L+D Y + G++ +RK FD + EK ++W+S+I YAQ G
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 294
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD--LEESVIVG 328
EA+ +F ++ + + + ++ LS+++ A +LR GK + +K+ LE SV+
Sbjct: 295 VEAMGLFKRL-QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL-- 351
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
S++DMY KCG VD A K F +M+ K+V SWT +I GYG H ++++ +FY+M++ +
Sbjct: 352 NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 411
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+ + +++VLSACSH+G+++EG + + I+P VEHY C+VDLLGRAG+LKEA
Sbjct: 412 PDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKH 471
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
LI+ M +K + +W +LL CR+H +++LG+ K L ++ N +V++SN+Y AG
Sbjct: 472 LIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGY 531
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL-Q 567
W + R L + L K G S VE+ +VH F G+ HP I E L+E +L +
Sbjct: 532 WNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLRE 591
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------------NLRVCGD 606
E+GYV + +HD+D E KE LR HSEKLA NLRVC D
Sbjct: 592 ELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVD 651
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH I+ +SK+ VVRD+ RFH F+DG CSCGDYW
Sbjct: 652 CHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 222/440 (50%), Gaps = 35/440 (7%)
Query: 73 RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFD 132
R ++ C+ G Q H G ++ S+ LIDMY KC E A K+FD
Sbjct: 6 RQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFD 65
Query: 133 EIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIA 192
+P+ RN+VSW+++++G+V N + + +L LF E ++ + +
Sbjct: 66 SMPE--RNVVSWSALMSGHVLNGDLKGSLSLFSEM------------GRQGIYPNEFTFS 111
Query: 193 SVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+ L AC +N + +G HGF +K GF+ V VGN+L+D Y++ G ++ + KVF ++
Sbjct: 112 TNLKACG--LLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV 169
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST-DVKCNAVTLSAVLLAIAHLGVLRLG 309
++ ++WN++IA + G ++ALD F M ++ + + TL+++L A + G++ G
Sbjct: 170 DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG 229
Query: 310 KCIHDQVIKMDL--EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
K IH +++ S + S++D+Y KCG + ARKAF+Q+KEK + SW+++I GY
Sbjct: 230 KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYA 289
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
EA+ LF ++ + + + S++ + L+++G + G+
Sbjct: 290 QEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ---MQALAVKLPSGL 346
Query: 428 EH--YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
E +VD+ + G + EA M++K D + W ++ H LG+ + +
Sbjct: 347 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKH---GLGKKSVRIF 402
Query: 486 FEL-----EPNNCGYHVLLS 500
+E+ EP+ Y +LS
Sbjct: 403 YEMLRHNIEPDEVCYLAVLS 422
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/657 (37%), Positives = 374/657 (56%), Gaps = 57/657 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +++ V SWN +++ L++ G EAL M+ + +T+ ++ +C+ L
Sbjct: 246 LFDSMPERD-VVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLS 304
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GKQ H Q H D +V+SAL+++Y+K G +A+ +F+ + R N V+WT +
Sbjct: 305 SLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDR--NNVAWTVL 362
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G++Q E++ LF + ++ + +D A+A+++S C +
Sbjct: 363 ISGFLQYGCFTESVELFNQM------------RAELMTLDQFALATLISGCCSRMDLCLG 410
Query: 208 EGAHGFVIKRGFDSEVGVGNTLID-------------------------------AYARG 236
H +K G V V N+LI AY++
Sbjct: 411 RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQV 470
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G+V +R+ FDGM EK+ +TWN+++ Y Q+G + L ++ M+ V+ + VT +
Sbjct: 471 GNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTL 530
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
A LG +LG I + +K+ L V ++I MY KCG++ ARK F+ + K++
Sbjct: 531 FKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDI 590
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW AMI GY H ++A+++F ++K G +P+YI++V+VLS CSH+GLVQEG + +
Sbjct: 591 VSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDM 650
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M NI PG+EH+ CMVDLLGRAG L EA DLI+ M +K VWG+LL AC+IH N +
Sbjct: 651 MKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNE 710
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
L E+AAK +FEL+ + G ++L++ IYA+AG+ +D + R LM+++ + K PG+S +E+
Sbjct: 711 LAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVD 770
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV-TDMT-SVIHDVDQEEKE---MTL 591
KVH F D HPQ I + L+EL K+ +GYV TD T S IH ++ MTL
Sbjct: 771 NKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIHHSEKLAVAFGLMTL 830
Query: 592 ----RIHSEKLANLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
IH K NLR+CGDCHTVI+LIS V RE V+RD+ RFH+F G CSCGDYW
Sbjct: 831 PTWMPIHIMK--NLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 885
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 225/494 (45%), Gaps = 64/494 (12%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSAL 86
LF + + +V SWN++++ + + +L F SM R P T CA+KSC AL
Sbjct: 113 LFGR-MPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGAL 171
Query: 87 --HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
H L A Q F D V++AL+DM+ +CG + A +LF I + +
Sbjct: 172 GWHSLALQLLAMVQK--FDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKE--PTMFCR 227
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEE-----------SECGGASE--------NSDNVF 185
SML GYV+ AL LF + S+ G E S V
Sbjct: 228 NSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 287
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+DS S L+AC+R++ + H VI+ + V + L++ YA+ G ++ V
Sbjct: 288 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGV 347
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F+ + +++ V W +I+ + Q G E++++F+QM ++ + + L+ ++
Sbjct: 348 FNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQM-RAELMTLDQFALATLISGCCSRMD 406
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC--------------------------- 338
L LG+ +H +K ++V+V S+I MY KC
Sbjct: 407 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITA 466
Query: 339 ----GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI-KAGVRPNYIT 393
G V AR+ F+ M EKNV +W AM+ Y H + L ++ M+ + VRP+++T
Sbjct: 467 YSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 526
Query: 394 FVSVLSACSHAGLVQEGWHWLN-TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
+V++ C+ G + G + T+ I+ V + ++ + + G++ EA + +
Sbjct: 527 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVAN--AVITMYSKCGRILEARKVFDF 584
Query: 453 MKVKADFVVWGSLL 466
+ VK D V W +++
Sbjct: 585 LNVK-DIVSWNAMI 597
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 122/531 (22%), Positives = 221/531 (41%), Gaps = 98/531 (18%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK------ 129
F A++SC A L + H + G VF+ + L+ Y CG LSDAR+
Sbjct: 27 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86
Query: 130 --------------------------LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
LF +P R++ SW ++++GY Q +R+ L+
Sbjct: 87 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPA--RDVASWNTLMSGYFQ---SRQYLVS 141
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEV 223
+ FL + S + + ++ +A + +C + + + V K +
Sbjct: 142 LETFL--------SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDS 193
Query: 224 GVGNTLIDAYARGGHVDVSRK-------------------------------VFDGMIEK 252
V L+D + R G VD++ + +FD M E+
Sbjct: 194 EVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPER 253
Query: 253 DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI 312
D V+WN +++ +Q+G EALD+ M +S V+ ++ T ++ L A A L LR GK +
Sbjct: 254 DVVSWNMMVSALSQSGRVREALDMVVDM-QSKGVRLDSTTYTSSLTACARLSSLRWGKQL 312
Query: 313 HDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
H QVI+ V ++++++Y K G A+ FN + ++N +WT +I+G+ +
Sbjct: 313 HAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCF 372
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSA-CSHAGLVQEGWHWLNTMGHEFNIEPG----V 427
E+++LF +M + + +++S CS L L H ++ G V
Sbjct: 373 TESVELFNQMRAELMTLDQFALATLISGCCSRMDLC------LGRQLHSLCLKSGQIQAV 426
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA-AKKLF 486
++ + + L+ A + M K D V W S++ A +G +A A++ F
Sbjct: 427 VVSNSLISMYAKCDNLQSAEAIFRFMNEK-DIVSWTSMITAYS-----QVGNVAKAREFF 480
Query: 487 E--LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVEL 535
+ E N ++ +L Y G ED R +M + + + V L
Sbjct: 481 DGMSEKNVITWNAML-GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTL 530
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/633 (37%), Positives = 361/633 (57%), Gaps = 65/633 (10%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
TL V + NVFS++++I ++ AL FS M L P P A+K+C+ L
Sbjct: 68 TLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGL 127
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L +Q H A + GF D FV S+L+ MY KC ++ DA ++FD + + ++VSW++
Sbjct: 128 SALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEP--DVVSWSA 185
Query: 147 MLTGYVQNDNAREALLLFKEF--------------LLEESECGGASENSDNVFVD----- 187
++ Y + EA LF E ++ G + +F+D
Sbjct: 186 LVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRG 245
Query: 188 ----SVAIASVLSACSRVT--VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY-------- 233
I+SVL A + V G+ HG+VIK+G S+ V + LID Y
Sbjct: 246 FEPDGTTISSVLPAVGDLEDLVMGIL--IHGYVIKQGLVSDKCVSSALIDMYGKCSCTSE 303
Query: 234 -----------------------ARGGHVDVSRKVF----DGMIEKDAVTWNSIIAIYAQ 266
+R G V+ S ++F D +E + V+W S+IA +Q
Sbjct: 304 MSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQ 363
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG EAL++F +M + VK N+VT+ +L A ++ L GK H ++ + V
Sbjct: 364 NGRDMEALELFREM-QIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVY 422
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
VG+++IDMY KCG++ +R F+ + KN+ W A+IAGY MH +A+EA+++F M ++G
Sbjct: 423 VGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSG 482
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+P+ I+F VLSACS +GL +EG ++ N+M ++ IE VEHY CMV LL RAGKL++A
Sbjct: 483 QKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQA 542
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
Y +I M V D VWG+LL +CR+H NV LGE+AA+KLFELEP+N G ++LLSNIYA+
Sbjct: 543 YAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASK 602
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
G W +V R R +MKN+ L K PG S +E++ KVH L GDK HPQ +I E L++L++++
Sbjct: 603 GMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEM 662
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
+++GY ++ V+ DV++++KE L HSEKLA
Sbjct: 663 KKLGYFPEINFVLQDVEEQDKEQILCGHSEKLA 695
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 200/462 (43%), Gaps = 93/462 (20%)
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
S L +QAH G D +++ L+ Y+ +DA + D +P+ N+ S
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEP--NVFS 81
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
+++++ + + AL F + L + + D+ + S + AC+ ++
Sbjct: 82 FSTLIYAFSKFHQFHHALSTFSQML------------TRGLMPDNRVLPSAVKACAGLSA 129
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
HG GFDS+ V ++L+ Y + + + +VFD M E D V+W++++A
Sbjct: 130 LKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAA 189
Query: 264 YAQNGLAAEALDVFDQM----VKSTDVKCNAV---------------------------- 291
YA+ G EA +F +M V+ + N +
Sbjct: 190 YARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPD 249
Query: 292 --TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC----------- 338
T+S+VL A+ L L +G IH VIK L V +++IDMY KC
Sbjct: 250 GTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFD 309
Query: 339 --------------------GQVDLARKAFNQMKEK----NVRSWTAMIAGYGMHCRARE 374
GQV+ + + F Q+K++ NV SWT+MIA + R E
Sbjct: 310 QMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDME 369
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE---HYG 431
AL+LF +M AGV+PN +T +L AC + + G H F++ G+ + G
Sbjct: 370 ALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHG-----KAAHCFSLRRGISTDVYVG 424
Query: 432 -CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++D+ + G+++ + +G+ K + V W +++ +H
Sbjct: 425 SALIDMYAKCGRIQASRICFDGIPTK-NLVCWNAVIAGYAMH 465
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/635 (37%), Positives = 367/635 (57%), Gaps = 36/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K V ++ V SWN++I ++ G E+++ F M P T +++C L
Sbjct: 273 IFDKMVLRDAV-SWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLG 330
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL GK H G+ D S+ LI+MY+KCG L ++++F + + ++ VSW SM
Sbjct: 331 DLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGM--KCKDSVSWNSM 388
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y+QN + EA+ LFK +V DSV +LS +++ +
Sbjct: 389 INVYIQNGSFDEAMKLFKMM-------------KTDVKPDSVTYVMLLSMSTQLGDLHLG 435
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H + K GF+S + V NTL+D YA+ G + S KVF+ M +D +TWN+IIA +
Sbjct: 436 KELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHS 495
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
L + +M ++ V + T+ ++L + L R GK IH + K+ LE V V
Sbjct: 496 EDCNLGLRMISRM-RTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPV 554
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G +I+MY KCG + + + F MK K+V +WTA+I+ GM+ ++A+ F +M AG+
Sbjct: 555 GNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGI 614
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+++ FV+++ ACSH+GLV+EG ++ + M ++ IEP +EHY C+VDLL R+ L +A
Sbjct: 615 VPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAE 674
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
D I M +K D +WG+LL ACR+ + ++ E ++++ EL P++ GY+VL+SNIYA G
Sbjct: 675 DFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALG 734
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+W+ V R +K R L K PG S +E++ KV+ F G K Q E++ + L L +
Sbjct: 735 KWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMA 794
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
+ GY+ ++ V+HD+D++EK L HSE+LA NLRVC DCHT
Sbjct: 795 KEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHT 854
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
V + ISK+V RE++VRD+ RFH FKDG CSCGDYW
Sbjct: 855 VTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/461 (32%), Positives = 246/461 (53%), Gaps = 29/461 (6%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
T+ ++F NNV+ WNS+I L G EAL +S +++ L P TFP I +
Sbjct: 65 TSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINA 124
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
C+ L D K H + GF D+++ +ALIDMY + +L ARK+F+E+P +R++V
Sbjct: 125 CAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP--LRDVV 182
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
SW S+++GY N EAL ++ F + V DS ++SVL AC
Sbjct: 183 SWNSLISGYNANGYWNEALEIYYRF------------RNLGVVPDSYTMSSVLRACG--G 228
Query: 203 VNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSI 260
+ V EG HG + K G +V V N L+ Y + + R++FD M+ +DAV+WN++
Sbjct: 229 LGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTM 288
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
I Y+Q GL E++ +F +MV K + +T++++L A HLG L GK +HD +I
Sbjct: 289 ICGYSQVGLYEESIKLFMEMV--NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG 346
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
E +I+MY KCG + +++ F+ MK K+ SW +MI Y + EA+ LF
Sbjct: 347 YECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF- 405
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW---LNTMGHEFNIEPGVEHYGCMVDLL 437
KM+K V+P+ +T+V +LS + G + G L MG NI +VD+
Sbjct: 406 KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVS----NTLVDMY 461
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
+ G++ ++ + E MK + D + W +++ +C ++ +LG
Sbjct: 462 AKCGEMGDSLKVFENMKAR-DIITWNTIIASCVHSEDCNLG 501
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 110/223 (49%), Gaps = 6/223 (2%)
Query: 193 SVLSACSRVTVNGVTEGA----HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD- 247
++ S+ SR + T H +I G V LI YA S VF
Sbjct: 14 TLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRL 73
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ WNSII NGL +EAL ++ + + ++ + T +V+ A A L
Sbjct: 74 ASPSNNVYLWNSIIRALTHNGLFSEALSLYSE-TQRIRLQPDTYTFPSVINACAGLLDFE 132
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
+ K IHD+V+ M + +G ++IDMYC+ +D ARK F +M ++V SW ++I+GY
Sbjct: 133 MAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 192
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
+ EAL+++Y+ GV P+ T SVL AC G V+EG
Sbjct: 193 ANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 235
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/602 (39%), Positives = 334/602 (55%), Gaps = 72/602 (11%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN--IVSWTSMLTGY 151
Q H F G ++ L Y+ G L + LF R +N + WT+++ G+
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFG----RTQNPSVFFWTAIIHGH 103
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+AL + + L + E N F +S+L C + H
Sbjct: 104 ALRGLHEQALNFYAQMLTQGVE--------PNAF----TFSSILKLCPIEP----GKALH 147
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHV-------------------------------D 240
+K GFDS++ V L+D YARGG V D
Sbjct: 148 SQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELD 207
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+R +FDGM E+D V WN +I Y QNG+ EAL +F +M+K+ K N VT+ +VL A
Sbjct: 208 AARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKA-KAKPNEVTVLSVLSAC 266
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
LG L G+ +H + ++ +V VGT+++DMY KCG ++ AR F+++ +K+V +W
Sbjct: 267 GQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWN 326
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
+MI GY MH ++EAL LF M + G+ P ITF+ +LSAC H+G V EGW N M E
Sbjct: 327 SMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDE 386
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
+ IEP +EHYGCMV+LLGRAG +++AY+L++ M ++ D V+WG+LLGACR+H + LGE
Sbjct: 387 YGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEK 446
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
+ L + N G ++LLSNIYA G W+ V R R++MK+ + K PG S +E+ KVH
Sbjct: 447 IVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVH 506
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA- 599
FL G HP+ ++IY LEE+N L+ GY V+HD+ + EKE +L +HSEKLA
Sbjct: 507 EFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAI 566
Query: 600 -----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
NLRVC DCH V +LISK+ R+IVVRD RFH+F +G CSCGD
Sbjct: 567 AFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGD 626
Query: 643 YW 644
YW
Sbjct: 627 YW 628
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 174/385 (45%), Gaps = 52/385 (13%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+VF W ++I A G +AL ++ M + P TF +K C + GK H
Sbjct: 92 SVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALH 147
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI------------------ 138
QA GF D++V + L+D+Y++ G++ A++LFD +P++
Sbjct: 148 SQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELD 207
Query: 139 -----------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R+ V W M+ GY QN EAL+LF+ L +++ +
Sbjct: 208 AARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAK------------PN 255
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
V + SVLSAC ++ H ++ G V VG L+D Y++ G ++ +R VFD
Sbjct: 256 EVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFD 315
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ +KD V WNS+I YA +G + EAL +F M + N +T +L A H G +
Sbjct: 316 KIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTN-ITFIGILSACGHSGWVT 374
Query: 308 LGKCIHDQVI-KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAG 365
G I +++ + +E + ++++ + G V+ A + M E + W ++
Sbjct: 375 EGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA 434
Query: 366 YGMHCRAREALDLFYKMIKAGVRPN 390
CR + L K+++ V N
Sbjct: 435 ----CRLHGKIALGEKIVELLVDQN 455
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K +D +V +WNS+I A G S EAL+ F SM ++ L PT TF + +C
Sbjct: 313 VFDK-IDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACG--- 368
Query: 88 DLHSG 92
HSG
Sbjct: 369 --HSG 371
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/677 (35%), Positives = 373/677 (55%), Gaps = 81/677 (11%)
Query: 42 NSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSALHDLHSG--KQAHQQ 98
N++++ AR + A+ F ++ SL P +F I + +H+L + Q H
Sbjct: 129 NAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCS 188
Query: 99 AFIFGFHRDVFVSSALIDMYSKC--GELS-DARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
G + VS+ALI +Y KC E S DARK+ DE+P + + ++WT+M+ GYV+
Sbjct: 189 VLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDK--DDLTWTTMVVGYVRRG 246
Query: 156 NAREALLLFKEF--------------LLEESECGGASE-----NSDNVFVDSVAIASVLS 196
+ A +F+E ++ C A E S+ V +D SVLS
Sbjct: 247 DVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLS 306
Query: 197 ACSRVTVNGVTEGAHGFVIK--RGFDSEVG--VGNTLIDAYARGGHVDVSRKVFDGMIEK 252
AC+ + HG +I+ F E V N L+ Y++GG + +++++FD M K
Sbjct: 307 ACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK 366
Query: 253 DAVTWNSI-------------------------------IAIYAQNGLAAEALDVFDQMV 281
D V+WN+I ++ Y GL+ +AL +F+QM
Sbjct: 367 DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQM- 425
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
++ DVK T + + A LG L+ G+ +H +++ E S G +++ MY KCG V
Sbjct: 426 RAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAV 485
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ AR F M + SW AMI+ G H REAL+LF +M+ G+ P+ I+F+++L+AC
Sbjct: 486 NDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTAC 545
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+HAGLV EG+H+ +M +F I PG +HY ++DLLGR+G++ EA DLI+ M + +
Sbjct: 546 NHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSI 605
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKN 521
W ++L CR + +++ G AA +LF + P + G ++LLSN Y+ AGRW D R R LM++
Sbjct: 606 WEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRD 665
Query: 522 RRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHD 581
R + K PG S +E+ K+H FLVGD +HP+ +++Y++LE + +++++GYV D V+HD
Sbjct: 666 RGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHD 725
Query: 582 VDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIV 623
++ EKE L HSEKLA NLR+CGDCHT + +SK V REIV
Sbjct: 726 MEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIV 785
Query: 624 VRDSKRFHYFKDGLCSC 640
VRD +RFH+FKDG CSC
Sbjct: 786 VRDVRRFHHFKDGECSC 802
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 125/523 (23%), Positives = 216/523 (41%), Gaps = 119/523 (22%)
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+++L+ + G L DA FD +P R+ V +M++ + + A A+ +F L
Sbjct: 95 ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALL-- 152
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI 230
G S D+ A+ S + + T+ H V+K G + + V N LI
Sbjct: 153 ----GSGSLRPDDY--SFTALISAVGQMHNLAAPHCTQ-LHCSVLKSGAAAVLSVSNALI 205
Query: 231 DAYARGGHVDVS---RKVFDGMIEKDAVT------------------------------- 256
Y + + S RKV D M +KD +T
Sbjct: 206 ALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVV 265
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
WN++I+ Y Q+G+ A+A ++F +MV S V + T ++VL A A+ G GK +H Q+
Sbjct: 266 WNAMISGYVQSGMCADAFELFRRMV-SEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQI 324
Query: 317 IKMD----LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA----------- 361
I++ E ++ V +++ +Y K G++ +A++ F+ M K+V SW
Sbjct: 325 IRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCL 384
Query: 362 --------------------MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
M++GY + +AL LF +M V+P T+ ++AC
Sbjct: 385 DKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAAC 444
Query: 402 S-----------HAGLVQEGWHWLNTMGHE-----------------FNIEPGVE--HYG 431
HA LVQ G+ N+ G+ F + P ++ +
Sbjct: 445 GELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWN 504
Query: 432 CMVDLLGRAGKLKEAYDLIEGM---KVKADFVVWGSLLGACRIHKNVDLG---EIAAKKL 485
M+ LG+ G +EA +L + M + D + + ++L AC VD G + K+
Sbjct: 505 AMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRD 564
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
F + P Y L+ ++ +GR + R L+K TP
Sbjct: 565 FGISPGEDHYARLI-DLLGRSGR---IGEARDLIKTMPFEPTP 603
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 172/379 (45%), Gaps = 45/379 (11%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN++I+ + G +A F M + TF + +C+ GK H Q
Sbjct: 266 WNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQII 325
Query: 101 I----FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
F + V++AL+ +YSK G++ A+++FD + ++++VSW ++L+GY+ +
Sbjct: 326 RLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM--NLKDVVSWNTILSGYIDSGC 383
Query: 157 AREALLLFKEFLLEESEC----------GGASENSDNVFVDSVA---------IASVLSA 197
+A+ +FK + GG SE++ +F A A ++A
Sbjct: 384 LDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAA 443
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C + H +++ GF++ GN L+ YA+ G V+ +R VF M D+V+W
Sbjct: 444 CGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSW 503
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N++I+ Q+G EAL++FDQMV + + + ++ +L A H G++ G +
Sbjct: 504 NAMISALGQHGHGREALELFDQMV-AEGIDPDRISFLTILTACNHAGLVDEGFHYFES-- 560
Query: 318 KMDLEESVIVG----TSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRA 372
M + + G +ID+ + G++ AR M E W A+++G CR
Sbjct: 561 -MKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSG----CRT 615
Query: 373 RE-------ALDLFYKMIK 384
A D ++MI
Sbjct: 616 NGDMEFGAYAADQLFRMIP 634
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 23/262 (8%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + N SW +++ GG S +AL+ F+ MR + P T+ AI +C L L
Sbjct: 392 KVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALK 451
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G+Q H GF +AL+ MY+KCG ++DAR +F +P + VSW +M++
Sbjct: 452 HGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPN--LDSVSWNAMISA 509
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Q+ + REAL LF + + E + D ++ ++L+AC+ + V EG
Sbjct: 510 LGQHGHGREALELFDQMVAE------------GIDPDRISFLTILTACNHAGL--VDEGF 555
Query: 211 HGF-VIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQ 266
H F +KR F G + LID R G + +R + M E W +I++
Sbjct: 556 HYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRT 615
Query: 267 NG---LAAEALDVFDQMVKSTD 285
NG A A D +M+ D
Sbjct: 616 NGDMEFGAYAADQLFRMIPQHD 637
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 258/663 (38%), Positives = 382/663 (57%), Gaps = 65/663 (9%)
Query: 28 LFNKYVDK----NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
LF+ YV K ++ F N+++ A+ G A F M + +L S I C
Sbjct: 116 LFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSM----ISGC 171
Query: 84 SALHDLHSGKQAHQQAFIFGFH--RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI 141
SG + + +F R++ ++++ Y+K G+L AR+ FDE+P+R ++
Sbjct: 172 -----WKSGNET-EAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPER--SV 223
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEE------------SECG--GASENSDNVF-- 185
VSW +M + Y Q + +EAL LF + L E S C G +D++
Sbjct: 224 VSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRM 283
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG------VGNTLIDAYARGGHV 239
+D I VL++ + + + I R E+G N +I AY R G +
Sbjct: 284 IDQKHI--VLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKL 341
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
++R++FD M ++D V+WNS+IA YAQNG +A ++++F +M+ D++ + VT+++VL A
Sbjct: 342 SLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSA 401
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
H+G L+L + D V + +++ + S+I MY KCG V A + F M ++V S+
Sbjct: 402 CGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSF 461
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
+I+G+ + +EA+ L M + G+ P+++T++ VL+ACSHAGL+ EG + ++
Sbjct: 462 NTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ- 520
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
P V+HY CMVDLLGRAG+L EA LI+ M +K V+GSLL A RIHK V LGE
Sbjct: 521 ----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGE 576
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
+AA KLFELEP N G +VLLSNIYA+ GRWEDV+R R +MK L K+ G S VE +G+V
Sbjct: 577 LAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQV 636
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
H F VGD+ H Q + IY+ L EL K++ VG+V D + + DV++EEKE L HSEKLA
Sbjct: 637 HKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLA 696
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLR+C DCHT I++ISK+ REIVVRD+ RFH F +G+CSC
Sbjct: 697 ICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCH 756
Query: 642 DYW 644
DYW
Sbjct: 757 DYW 759
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 27/267 (10%)
Query: 211 HGFVIKRGFDSE-VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG ++ S V LI+ H +F DA ++ ++ Y++ G
Sbjct: 21 HGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYYSRMGA 80
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL----GKCIHDQVIKMDLEESV 325
+ + +F KC +L+ ++ +++L G H V+K+ +
Sbjct: 81 HNQVVSLF---------KCTH-SLNLRPQPFVYIYLIKLAGKSGNLFHAYVLKLGHIDDH 130
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+ +I+DMY K GQVDLAR F QM E+ + W +MI+G EA+ LF M+ A
Sbjct: 131 FIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLF-NMMPA 189
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
N IT+ S+++ + G ++ + + M E V + M + KE
Sbjct: 190 ---RNIITWTSMVTGYAKMGDLESARRYFDEMP-----ERSVVSWNAMQSAYAQKECPKE 241
Query: 446 AYDLIEGM---KVKADFVVWGSLLGAC 469
A +L M + D W + +C
Sbjct: 242 ALNLFHQMLEEGITPDDTTWVVTISSC 268
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/635 (37%), Positives = 359/635 (56%), Gaps = 34/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ V K+ V +W ++++ + AL FS MR P A+K+ L
Sbjct: 205 VFDGIVGKDAV-TWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLS 263
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
GK H + + + V AL+DMY+KCG++ DA +F+ IP +++ W+ +
Sbjct: 264 SALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHD--DVILWSFL 321
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ Y Q+ +A +F + V + +++ VL AC+ + +
Sbjct: 322 ISRYAQSCQNEQAFEMFLRMM------------RSFVVPNEFSLSGVLQACANIAFLELG 369
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
E H IK G++SE+ VGN L+D YA+ +++ S ++F + + + V+WN+II Y Q+
Sbjct: 370 EQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQS 429
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A +AL VF +M ++ + VT S+VL A A+ ++ IH + K IV
Sbjct: 430 GFAEDALSVFHEM-RAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIV 488
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
S+ID Y KCG + A K F + E +V SW ++I+ Y +H RA AL+LF +M K+ +
Sbjct: 489 CNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDI 548
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+ N +TFVS+LS C GLV +G N+M + I+P +EHY C+V LLGRAG+L +A
Sbjct: 549 KANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDAL 608
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I + +VW +LL +C +HKNV LG AA+K+ ++EP++ +VLLSN+YA AG
Sbjct: 609 KFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAG 668
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
++V R M+N + K G S VE++G+VHAF VG +HP I LE LN+K
Sbjct: 669 ILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKAS 728
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV D+ V+HDVD+EEK L +HSE+LA NLR C DCHT
Sbjct: 729 REGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHT 788
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ ++ISK+V REI+VRD RFH+F++G+CSCGDYW
Sbjct: 789 MFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 213/431 (49%), Gaps = 28/431 (6%)
Query: 48 LARGGDSVEALRAFSSMRKLSLTPTRSTFPCA--IKSCSALHDLHSGKQAHQQAFIFG-- 103
L+R + EAL+ P ++ CA ++ C A D +G+ H + G
Sbjct: 18 LSRNLAANEALQWLDDELASLALPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGV 77
Query: 104 FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
D F ++ L++ Y+K G L+ AR+LFD +P+R N VS+ +++ GY EAL L
Sbjct: 78 AQLDTFCANVLLNFYAKLGPLATARRLFDGMPER--NRVSFVTLMQGYALRGEFEEALEL 135
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEV 223
F+ E E V+ + ++L + G+ G H K G D
Sbjct: 136 FRRLQREGHE------------VNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNA 183
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
VG LIDAY+ G V +R VFDG++ KDAVTW ++++ Y++N + AL+ F +M +
Sbjct: 184 FVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKM-RM 242
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL 343
T K N L++ L A L LGK IH +K + VG +++DMY KCG ++
Sbjct: 243 TGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIED 302
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
A F + +V W+ +I+ Y C+ +A ++F +M+++ V PN + VL AC++
Sbjct: 303 AHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACAN 362
Query: 404 AGLVQEGWHWLN---TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
++ G N +G+E + G ++D+ + ++ + ++ ++ A+ V
Sbjct: 363 IAFLELGEQIHNLAIKLGYESELFVG----NALMDMYAKCRNMENSLEIFSSLQ-DANEV 417
Query: 461 VWGSLL-GACR 470
W +++ G C+
Sbjct: 418 SWNTIIVGYCQ 428
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/657 (37%), Positives = 374/657 (56%), Gaps = 57/657 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +++ V SWN +++ L++ G EAL M+ + +T+ ++ +C+ L
Sbjct: 226 LFDSMPERD-VVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLS 284
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GKQ H Q H D +V+SAL+++Y+K G +A+ +F+ + R N V+WT +
Sbjct: 285 SLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDR--NNVAWTVL 342
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G++Q E++ LF + ++ + +D A+A+++S C +
Sbjct: 343 ISGFLQYGCFTESVELFNQM------------RAELMTLDQFALATLISGCCSRMDLCLG 390
Query: 208 EGAHGFVIKRGFDSEVGVGNTLID-------------------------------AYARG 236
H +K G V V N+LI AY++
Sbjct: 391 RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQV 450
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G+V +R+ FDGM EK+ +TWN+++ Y Q+G + L ++ M+ V+ + VT +
Sbjct: 451 GNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTL 510
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
A LG +LG I + +K+ L V ++I MY KCG++ ARK F+ + K++
Sbjct: 511 FKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDI 570
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW AMI GY H ++A+++F ++K G +P+YI++V+VLS CSH+GLVQEG + +
Sbjct: 571 VSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDM 630
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M NI PG+EH+ CMVDLLGRAG L EA DLI+ M +K VWG+LL AC+IH N +
Sbjct: 631 MKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNE 690
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
L E+AAK +FEL+ + G ++L++ IYA+AG+ +D + R LM+++ + K PG+S +E+
Sbjct: 691 LAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVD 750
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV-TDMT-SVIHDVDQEEKE---MTL 591
KVH F D HPQ I + L+EL K+ +GYV TD T S IH ++ MTL
Sbjct: 751 NKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIHHSEKLAVAFGLMTL 810
Query: 592 ----RIHSEKLANLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
IH K NLR+CGDCHTVI+LIS V RE V+RD+ RFH+F G CSCGDYW
Sbjct: 811 PTWMPIHIMK--NLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 226/500 (45%), Gaps = 64/500 (12%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSAL 86
LF + + +V SWN++++ + + +L F SM R P T CA+KSC AL
Sbjct: 93 LFGR-MPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGAL 151
Query: 87 --HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
H L A Q F D V++AL+DM+ +CG + A +LF I + +
Sbjct: 152 GWHSLALQLLAMVQK--FDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKE--PTMFCR 207
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEE-----------SECGGASE--------NSDNVF 185
SML GYV+ AL LF + S+ G E S V
Sbjct: 208 NSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+DS S L+AC+R++ + H VI+ + V + L++ YA+ G ++ V
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGV 327
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F+ + +++ V W +I+ + Q G E++++F+QM ++ + + L+ ++
Sbjct: 328 FNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQM-RAELMTLDQFALATLISGCCSRMD 386
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC--------------------------- 338
L LG+ +H +K ++V+V S+I MY KC
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITA 446
Query: 339 ----GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI-KAGVRPNYIT 393
G V AR+ F+ M EKNV +W AM+ Y H + L ++ M+ + VRP+++T
Sbjct: 447 YSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 506
Query: 394 FVSVLSACSHAGLVQEGWHWLN-TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
+V++ C+ G + G + T+ I+ V + ++ + + G++ EA + +
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVAN--AVITMYSKCGRILEARKVFDF 564
Query: 453 MKVKADFVVWGSLLGACRIH 472
+ VK D V W +++ H
Sbjct: 565 LNVK-DIVSWNAMITGYSQH 583
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 122/531 (22%), Positives = 221/531 (41%), Gaps = 98/531 (18%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK------ 129
F A++SC A L + H + G VF+ + L+ Y CG LSDAR+
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66
Query: 130 --------------------------LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
LF +P R++ SW ++++GY Q +R+ L+
Sbjct: 67 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPA--RDVASWNTLMSGYFQ---SRQYLVS 121
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEV 223
+ FL + S + + ++ +A + +C + + + V K +
Sbjct: 122 LETFL--------SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDS 173
Query: 224 GVGNTLIDAYARGGHVDVSRK-------------------------------VFDGMIEK 252
V L+D + R G VD++ + +FD M E+
Sbjct: 174 EVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPER 233
Query: 253 DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI 312
D V+WN +++ +Q+G EALD+ M +S V+ ++ T ++ L A A L LR GK +
Sbjct: 234 DVVSWNMMVSALSQSGRVREALDMVVDM-QSKGVRLDSTTYTSSLTACARLSSLRWGKQL 292
Query: 313 HDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
H QVI+ V ++++++Y K G A+ FN + ++N +WT +I+G+ +
Sbjct: 293 HAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCF 352
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSA-CSHAGLVQEGWHWLNTMGHEFNIEPG----V 427
E+++LF +M + + +++S CS L L H ++ G V
Sbjct: 353 TESVELFNQMRAELMTLDQFALATLISGCCSRMDLC------LGRQLHSLCLKSGQIQAV 406
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA-AKKLF 486
++ + + L+ A + M K D V W S++ A +G +A A++ F
Sbjct: 407 VVSNSLISMYAKCDNLQSAEAIFRFMNEK-DIVSWTSMITAYS-----QVGNVAKAREFF 460
Query: 487 E--LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVEL 535
+ E N ++ +L Y G ED R +M + + + V L
Sbjct: 461 DGMSEKNVITWNAML-GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTL 510
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/664 (35%), Positives = 367/664 (55%), Gaps = 47/664 (7%)
Query: 7 SSVSSVVSNVDKHSTNTNLTTL---FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
+ VS + +D + N +L + F+ ++ V W +I A+ G S EA+ F
Sbjct: 187 TDVSVGCALIDMFAKNGDLVAMRRVFDGLFERT-VVVWTLLITRYAQSGYSDEAVELFLD 245
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC-- 121
M + P + T + +C+ L G+Q H A G D VS L+DMY+K
Sbjct: 246 MLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHN 305
Query: 122 -GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA-REALLLFKEFLLEESECGGASE 179
L +AR++F+ +P+ N+++WT++L+GYVQ + + ++LF + L
Sbjct: 306 GQSLHNAREVFNRMPKH--NVMAWTALLSGYVQRGSQDNQVMILFCKML----------- 352
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
++ + + + +S+L AC+ + H +K VGN L+ YA G +
Sbjct: 353 -NEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSI 411
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+ +R FD + EK+ V+++ + ++ D ++ ++ + T +++ A
Sbjct: 412 EEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQ------DYQIERMELGISTFTFGSLISA 465
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A +G+L G+ +H +K +G S++ MY +CG + A + F++M + NV SW
Sbjct: 466 AASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISW 525
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
T+MI+G H A AL+LF+ MI AGV+PN +T+++VLSACSHAGLV+EG M
Sbjct: 526 TSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQK 585
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
+ P +EHY CMVDLLGR+G +++A D I M + D +VW +LLGAC+ H N+D+GE
Sbjct: 586 HHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGE 645
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
IAA + +LEP + +VLLSN+YA AG W+ V R RSLM+++ L K G S + + +
Sbjct: 646 IAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTI 705
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
H F GD HPQ E+IY LE L +++ +GYV D + V+HD+ E KE+ L HSEK+A
Sbjct: 706 HEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIA 765
Query: 600 -------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
NLRVC DCH+ ++ +SK REI++RDS RFH KDG CSC
Sbjct: 766 VAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSC 825
Query: 641 GDYW 644
G+YW
Sbjct: 826 GEYW 829
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 182/326 (55%), Gaps = 21/326 (6%)
Query: 88 DLHSGKQAHQQAFIFG--FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
D+H G+ G D V+++L+ +YSKC ++ AR +FD +P +R++VSWT
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M + +N EAL LF E L E + ++ + + AC +
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEE------------GLLPNAFTLCAATQACFASELFH 169
Query: 206 VTEGA-HGFVIKRGF-DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ GA G V K GF ++V VG LID +A+ G + R+VFDG+ E+ V W +I
Sbjct: 170 LAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITR 229
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YAQ+G + EA+++F M+++ + + TLS++L A LG RLG+ +H +++ LE
Sbjct: 230 YAQSGYSDEAVELFLDMLEN-GFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLES 288
Query: 324 SVIVGTSIIDMYCKC--GQ-VDLARKAFNQMKEKNVRSWTAMIAGYGMH-CRAREALDLF 379
V ++DMY K GQ + AR+ FN+M + NV +WTA+++GY + + + LF
Sbjct: 289 DSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILF 348
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAG 405
KM+ G+RPN+IT+ S+L AC++ G
Sbjct: 349 CKMLNEGIRPNHITYSSMLKACANLG 374
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 240/488 (49%), Gaps = 54/488 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH-S 91
V ++ SW ++ + L+R G EALR F + L P T A ++C A H +
Sbjct: 112 VGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLA 171
Query: 92 GKQAHQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G F GF DV V ALIDM++K G+L R++FD + +R +V WT ++T
Sbjct: 172 GGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFER--TVVVWTLLITR 229
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVF-VDSVAIASVLSACSRVTVNGVTEG 209
Y Q+ + EA+ LF + L +N F D ++S+LSAC+ + + +
Sbjct: 230 YAQSGYSDEAVELFLDML-------------ENGFQPDQYTLSSMLSACTELGSFRLGQQ 276
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYAR---GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H ++ G +S+ V L+D YA+ G + +R+VF+ M + + + W ++++ Y Q
Sbjct: 277 LHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQ 336
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
G + + + + ++ N +T S++L A A+LG G+ IH +K +L + +
Sbjct: 337 RGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNV 396
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
VG +++ MY + G ++ AR AF+Q+ EKN+ S++ + G G R+ D + ++ G
Sbjct: 397 VGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDG---RSNTYQDYQIERMELG 453
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG-------CMVDLLGR 439
+ + TF S++SA + G++ +G H +++ G +G +V + R
Sbjct: 454 I--STFTFGSLISAAASVGMLTKGQRL-----HALSLKAG---FGSDRAIGNSLVSMYSR 503
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA-AKKLFE------LEPNN 492
G L +A + + M + + W S++ H G A A +LF ++PN+
Sbjct: 504 CGYLVDACQVFDEMN-DHNVISWTSMISGLAKH-----GYAARALELFHDMIAAGVKPND 557
Query: 493 CGYHVLLS 500
Y +LS
Sbjct: 558 VTYIAVLS 565
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/672 (36%), Positives = 373/672 (55%), Gaps = 41/672 (6%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
+ SS + +VS+ HS T T++ + +N I G+ A+ +
Sbjct: 35 RPSSKTPLVSSNLYHSCATIGTSVLPSETIDCKITDYNIEICRFCELGNLRRAMELINQS 94
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
K L T+ ++ C+ L + G++ H D + S L+ MY CG+L
Sbjct: 95 PKPDLE--LRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDL 152
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
+ R++FD++ + W ++ GY + N RE+L LFK E G S
Sbjct: 153 REGRRIFDKVANE--KVFLWNLLMNGYAKIGNFRESLSLFKRM----RELGIRRVESARK 206
Query: 185 FVDSVAIASVLSACSRVT---VNGVTE-GAHGF--VIKRGFDS--------EVGVGNTLI 230
D + V+S S ++ NG++E G F ++ G ++ E+ + N L+
Sbjct: 207 LFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLL 266
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
D Y++ G+++ + +VF+ M E+ V+W S+IA YA+ GL+ ++ +F +M K D+ N+
Sbjct: 267 DMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKE-DLFPNS 325
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
+T++ +L A A L L G+ IH +++ V +++DMY KCG + LAR F+
Sbjct: 326 ITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDM 385
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
+ EK++ SWT MIAGYGMH EA+ F +M +G+ P+ ++F+S+L ACSH+GL+ EG
Sbjct: 386 IPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 445
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
W + N M + IEP EHY C+VDLL RAG L +AY I+ M ++ D +WG+LL CR
Sbjct: 446 WGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCR 505
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
I+ +V L E A+ +FELEP N GY+VLL+NIYA A +WE+V++ R + R L K PG
Sbjct: 506 IYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGC 565
Query: 531 SLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMT 590
S +E++GKVH F+ GD HP KI L++ +++E G+ M + D EKEM
Sbjct: 566 SWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMA 625
Query: 591 LRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHY 632
L HSEK+A NLRVCGDCH + + +SK+V R+I++RDS RFH+
Sbjct: 626 LCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHH 685
Query: 633 FKDGLCSCGDYW 644
FKDG CSC +W
Sbjct: 686 FKDGSCSCRGHW 697
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 131/267 (49%), Gaps = 24/267 (8%)
Query: 3 LSKSSSVSSVVSN--VDKHSTNTNLTTLFNKY--VDKNNVFSWNSVIADLARGGDSVEAL 58
L+ SV ++N +D +S + NL + + + + +V SW S+IA AR G S ++
Sbjct: 251 LATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSV 310
Query: 59 RAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMY 118
R F M K L P T C + +C++L L G++ H GF D V++AL+DMY
Sbjct: 311 RLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMY 370
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
KCG L AR LFD IP+ +++VSWT M+ GY + EA+ F E
Sbjct: 371 LKCGALGLARLLFDMIPE--KDLVSWTVMIAGYGMHGYGSEAIAAFNEM----------- 417
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG---FDSEVGVGNTLIDAYAR 235
+ + D V+ S+L ACS + + EG F + R + + ++D AR
Sbjct: 418 -RNSGIEPDEVSFISILYACSHSGL--LDEGWGFFNMMRNNCCIEPKSEHYACIVDLLAR 474
Query: 236 GGHVDVSRKVFDGM-IEKDAVTWNSII 261
G++ + K M IE DA W +++
Sbjct: 475 AGNLSKAYKFIKMMPIEPDATIWGALL 501
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/655 (37%), Positives = 359/655 (54%), Gaps = 62/655 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +VF WN++I +R S + + M ++ P TFP +K + L G
Sbjct: 95 IPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYG 154
Query: 93 KQAHQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K A I GF ++FV I ++S CG ++ ARK+FD +V+W +L+GY
Sbjct: 155 KVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGW--EVVTWNVVLSGY 212
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+ E+ LF E E +C S NS V + +LSACS++ + +
Sbjct: 213 NRFKRYEESKRLFIEM---EKKCECVSPNS-------VTLVLMLSACSKLKDLVGGKCIY 262
Query: 212 GFVIKRGF-DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
IK G + + + N LID +A G +D +R VFD M +D ++W SI+ +A
Sbjct: 263 NKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRI 322
Query: 271 AEALDVFDQM------------------------------VKSTDVKCNAVTLSAVLLAI 300
A FDQM ++ ++VK + T+ ++L A
Sbjct: 323 DLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTAC 382
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
AHLG L LG+ + K ++ +G ++IDMY KCG V+ A+K FN+M++K+ +WT
Sbjct: 383 AHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWT 442
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
AMI G + EAL +F M++A V P+ IT++ V+ AC+H GLV +G H+ + M +
Sbjct: 443 AMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQ 502
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
I+P + HYGCMVDLLGRAG LKEA ++I M VK + +VWGSLLGACR+HKNV L E+
Sbjct: 503 HGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEM 562
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
AA ++ ELEP N +VLL NIYA +W+++ R +M R + K PG SL+E+ G V+
Sbjct: 563 AANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVY 622
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA- 599
F+ GDK HPQ ++IY LE + L GY D + V DV +E+KE L +HSEKLA
Sbjct: 623 EFVAGDKSHPQSKEIYAKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAI 682
Query: 600 -----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGL 637
NLR+C DCH + ++SKV +RE++VRD RFH+F+ GL
Sbjct: 683 AYALISSGKGVTIRIVKNLRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHFRHGL 737
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 208/437 (47%), Gaps = 50/437 (11%)
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRD-VFVSSALIDMYSK-CG 122
R +S TP S I + ++ Q H Q G + +F++ +I +K G
Sbjct: 24 RMISNTPLHSFVKSPISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESG 83
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
++ ARK+FDEIPQ ++ W +M+ GY + + + + L+K L+ + G +
Sbjct: 84 DVYYARKVFDEIPQP--SVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFP-- 139
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
F+ + +V +N HGF+ DS + V I ++ G V+ +
Sbjct: 140 --FLLKGFTKDMALKYGKVLLNHAV--IHGFL-----DSNLFVQKGFIHLFSLCGLVNYA 190
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD-VKCNAVTLSAVLLAIA 301
RK+FD + VTWN +++ Y + E+ +F +M K + V N+VTL +L A +
Sbjct: 191 RKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACS 250
Query: 302 HLGVLRLGKCIHDQVIKMDL-EESVIVGTSIIDMYCKCGQ-------------------- 340
L L GKCI+++ IK + E ++I+ ++IDM+ CG+
Sbjct: 251 KLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWT 310
Query: 341 -----------VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+DLARK F+QM E++ SWTAMI GY R +E L LF M + V+P
Sbjct: 311 SIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKP 370
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ T VS+L+AC+H G ++ G W T + I+ ++D+ + G +++A +
Sbjct: 371 DEFTMVSILTACAHLGALELG-EWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKI 429
Query: 450 IEGMKVKADFVVWGSLL 466
M+ K F W +++
Sbjct: 430 FNEMQKKDKF-TWTAMI 445
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 17/261 (6%)
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G V +RKVFD + + WN++I Y++ + + ++ M+ ++K + T +
Sbjct: 83 GDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVH-NIKPDGFTFPFL 141
Query: 297 LLAIAHLGVLRLGKCIHDQ-VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
L L+ GK + + VI L+ ++ V I ++ CG V+ ARK F+
Sbjct: 142 LKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWE 201
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKA--GVRPNYITFVSVLSACSHAGLVQEGWHW 413
V +W +++GY R E+ LF +M K V PN +T V +LSACS + G
Sbjct: 202 VVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCI 261
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL----GAC 469
N E +EP + ++D+ G++ A + + MK + D + W S++ C
Sbjct: 262 YNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTR-DVISWTSIVTGFANTC 320
Query: 470 RIHKNVDLGEIAAKKLFELEP 490
RI DL A+K F+ P
Sbjct: 321 RI----DL----ARKYFDQMP 333
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ + K + F+W ++I LA G EAL FS M + S+TP T+ + +C+ +
Sbjct: 429 IFNE-MQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVG 487
Query: 88 DLHSGKQAH-QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ GK A G ++ ++D+ + G L +A ++ +P + +IV W S
Sbjct: 488 LVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIV-WGS 546
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
+L + N + A + E L E E G V + ++ +AC +
Sbjct: 547 LLGACRVHKNVQLAEMAANEILELEPENGAV----------YVLLCNIYAACKK 590
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/617 (39%), Positives = 347/617 (56%), Gaps = 69/617 (11%)
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQ 136
+ SCS + +L KQ H Q G D +I SK G+L+ A ++FD+IP
Sbjct: 26 GLDSCSTMAEL---KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPH 82
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
I + ++ GY++ AR + ++ L +V + ++
Sbjct: 83 PDAYI--YNTIFRGYLRWQLARNCIFMYSRML------------HKSVSPNKFTYPPLIR 128
Query: 197 ACS-----------RVTVNGVTEGAHGFVI----------------KRGFDS----EVGV 225
AC V GA GF + +R FD+ +V
Sbjct: 129 ACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVS 188
Query: 226 GNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD 285
+LI Y++ G VD +R+VF+ M E+++V+WN++IA Y Q+ EA +FD+M + +
Sbjct: 189 WTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRM-RLEN 247
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
V + +++L A LG L GK IH + K +E + T++IDMYCKCG ++ A
Sbjct: 248 VVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKAS 307
Query: 346 KAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
+ FN++ +K + SW MI G MH + A++LF +M + V P+ ITFV+VLSAC+H+G
Sbjct: 308 EVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSG 367
Query: 406 LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
LV+EG H+ M ++PG+EH+GCMVDLLGRAG L+EA LI M V D V G+L
Sbjct: 368 LVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGAL 427
Query: 466 LGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLA 525
+GACRIH N +LGE KK+ ELEP+N G +VLL+N+YA+AGRWEDV + R LM +R +
Sbjct: 428 VGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVK 487
Query: 526 KTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQE 585
K PGFS++E V F+ G + HPQ ++IY L+E+ ++ +GYV D V+HD+D+E
Sbjct: 488 KAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEE 547
Query: 586 EKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDS 627
EKE L HSEKLA NLR+C DCH +LISKV DREI++RD
Sbjct: 548 EKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDR 607
Query: 628 KRFHYFKDGLCSCGDYW 644
RFH+F+ G CSC DYW
Sbjct: 608 NRFHHFRMGGCSCKDYW 624
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 169/345 (48%), Gaps = 24/345 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K + + + +N++ R + + +S M S++P + T+P I++C +
Sbjct: 76 VFDK-IPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDY 134
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ GKQ H FGF D F + LI MY L AR++FD +PQ R++VSWTS+
Sbjct: 135 AIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQ--RDVVSWTSL 192
Query: 148 LTGYVQ---NDNAREALLLFKEF----------------LLEESECGGASENSDNVFVDS 188
+TGY Q D ARE L E L E+ +NV +D
Sbjct: 193 ITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDK 252
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
AS+LSAC+ + + HG++ K G + + + T+ID Y + G ++ + +VF+
Sbjct: 253 FVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNE 312
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
+ +K +WN +I A +G A+++F +M + V + +T VL A AH G++
Sbjct: 313 LPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREM-VAPDGITFVNVLSACAHSGLVEE 371
Query: 309 GKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
GK + + + L+ + ++D+ + G ++ ARK N+M
Sbjct: 372 GKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMP 416
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 156/360 (43%), Gaps = 26/360 (7%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S +S+++ + +F ++N+V SWN++IA + EA F MR
Sbjct: 188 SWTSLITGYSQWGFVDKAREVFELMPERNSV-SWNAMIAAYVQSNRLHEAFALFDRMRLE 246
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
++ + + +C+ L L GK H G D +++ +IDMY KCG L A
Sbjct: 247 NVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKA 306
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
++F+E+PQ + I SW M+ G + A+ LFKE + V D
Sbjct: 307 SEVFNELPQ--KGISSWNCMIGGLAMHGKGEAAIELFKEM------------EREMVAPD 352
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRK 244
+ +VLSAC+ + V EG H F G + ++D R G ++ +RK
Sbjct: 353 GITFVNVLSACAHSGL--VEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARK 410
Query: 245 VFDGM-IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+ + M + DA +++ +G + ++++ L A L A A
Sbjct: 411 LINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGR 470
Query: 304 --GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV-DLARKAFNQMKE--KNVRS 358
V ++ K ++D+ +K S+I S +D + G+ A++ + ++ E + +RS
Sbjct: 471 WEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRS 530
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/635 (37%), Positives = 361/635 (56%), Gaps = 37/635 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGD---SVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
K + NV SWN+++ + GD + + LR + + + T A+ C
Sbjct: 335 KLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSE-DVKADEVTILNAVPVCFDES 393
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L S K+ H + F D +++A + Y+KCG LS A+++F I R + + SW ++
Sbjct: 394 VLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGI--RSKTLNSWNAL 451
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY Q+ + R +L + L+ G + D+ + S+LSACS++ +
Sbjct: 452 IGGYAQSSDPRLSL----DAHLQMKNSG--------LLPDNFTVCSLLSACSKLKSLRLG 499
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HGF+I+ + ++ V +++ Y G + + +FD M + V+WN++I + QN
Sbjct: 500 KEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQN 559
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G AL +F QMV C +++ V A + L LRLG+ H +K LE++ +
Sbjct: 560 GFPERALGLFRQMVLYGIQPC-GISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFI 618
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
SIIDMY K G + + K FN +KEK+ SW AMI GYGMH RA+EA+ LF +M + G
Sbjct: 619 ACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGR 678
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ +TF+ VL+AC+H+GL+ EG +L+ M F ++P ++HY C++D+LGRAG+L A
Sbjct: 679 NPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNAL 738
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ M + D +W SLL CRIH+N+++GE A KLF LEP +VLLSN+YA G
Sbjct: 739 RVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLG 798
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+W+DV + R MK L K G S +EL GKV +F+VG++ E+I L +K+
Sbjct: 799 KWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIW 858
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
++GY D +SV HD+ +EEK LR HSEKLA NLR+C DCH
Sbjct: 859 KMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHN 918
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LISKV++REIVVRD+KRFH+F G CSCGDYW
Sbjct: 919 AAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 182/369 (49%), Gaps = 30/369 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
N+F WN+VI+ +R E L F M K L P TFPC IK+C+ + D+ G
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H G D+FV +AL+ Y G +SDA KLFD +P+ RN+VSW SM+ + N
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPE--RNLVSWNSMIRVFSDNG 267
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVA-IASVLSACSRVTVNGVTEGAHGFV 214
+ D F+ VA + +VL C+R GV +G HG+
Sbjct: 268 D-------------------------DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWA 302
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+K D E+ V N L+D Y++ G + S+ +F K+ V+WN+++ ++ G
Sbjct: 303 VKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTF 362
Query: 275 DVFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
D+ QM+ S DVK + VT+ + VL K +H +K + ++ + +
Sbjct: 363 DLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVA 422
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
Y KCG + A++ F+ ++ K + SW A+I GY R +LD +M +G+ P+ T
Sbjct: 423 SYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFT 482
Query: 394 FVSVLSACS 402
S+LSACS
Sbjct: 483 VCSLLSACS 491
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 232/482 (48%), Gaps = 40/482 (8%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+++VS H ++ LF+ ++N V SWNS+I + GD +
Sbjct: 226 NALVSFYGTHGFVSDALKLFDIMPERNLV-SWNSMIRVFSDNGDDG------------AF 272
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P +T + C+ ++ GK H A +++ V++AL+DMYSK G + D++
Sbjct: 273 MPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQM 332
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F +N+VSW +M+ G+ + L ++ L S++V D V
Sbjct: 333 IFK--LNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQML----------AGSEDVKADEV 380
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
I + + C +V + H + +K+ F + + N + +YA+ G + +++VF G+
Sbjct: 381 TILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGI 440
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
K +WN++I YAQ+ +LD QM K++ + + T+ ++L A + L LRLG
Sbjct: 441 RSKTLNSWNALIGGYAQSSDPRLSLDAHLQM-KNSGLLPDNFTVCSLLSACSKLKSLRLG 499
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K +H +I+ LE + V S++ +Y CG++ + F+ M++ ++ SW +I G+ +
Sbjct: 500 KEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQN 559
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE- 428
AL LF +M+ G++P I+ ++V ACS ++ L H + ++ +E
Sbjct: 560 GFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLR-----LGREAHAYALKHLLED 614
Query: 429 --HYGC-MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
C ++D+ + G + ++ + G+K K+ W +++ +H A KL
Sbjct: 615 NAFIACSIIDMYAKNGAITQSSKVFNGLKEKSA-ASWNAMIMGYGMHGRAK----EAIKL 669
Query: 486 FE 487
FE
Sbjct: 670 FE 671
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 157/335 (46%), Gaps = 33/335 (9%)
Query: 72 TRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHR---DVFVSSALIDMYSKCGELSDAR 128
R +++ D+ G++ H + G R D + + +I MY+ CG D+R
Sbjct: 83 VREALGLLLQASGKRKDIEMGRKIHH--LVSGSTRLRSDDVLCTRIITMYAMCGSPDDSR 140
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
FD + R +N+ W ++++ Y +N+ E L +F + + + ++ D+
Sbjct: 141 SAFDAL--RSKNLFQWNAVISSYSRNELYHEVLEMFIKMI-----------SKTHLLPDN 187
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
V+ AC+ ++ G+ HG V+K G ++ VGN L+ Y G V + K+FD
Sbjct: 188 FTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDI 247
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M E++ V+WNS+I +++ NG D DV T+ VL A + +
Sbjct: 248 MPERNLVSWNSMIRVFSDNG---------DDGAFMPDV----ATVVTVLPVCAREREIGV 294
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK +H +K+ L++ ++V +++DMY K G + ++ F KNV SW M+ G+
Sbjct: 295 GKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSA 354
Query: 369 HCRAREALDLFYKMIKAG--VRPNYITFVSVLSAC 401
DL +M+ V+ + +T ++ + C
Sbjct: 355 EGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVC 389
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
+I YA G D SR FD + K+ WN++I+ Y++N L E L++F +M+ T +
Sbjct: 126 IITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLP 185
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+ T V+ A A + + +G +H V+K L E + VG +++ Y G V A K F
Sbjct: 186 DNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLF 245
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH----- 403
+ M E+N+ SW +MI + + P+ T V+VL C+
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGD------------DGAFMPDVATVVTVLPVCAREREIG 293
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGV----EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
G GW ++ E + + +GC++D +I + +
Sbjct: 294 VGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIID-----------SQMIFKLNNNKNV 342
Query: 460 VVWGSLLGACR----IHKNVDL 477
V W +++G IH DL
Sbjct: 343 VSWNTMVGGFSAEGDIHGTFDL 364
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/645 (37%), Positives = 362/645 (56%), Gaps = 41/645 (6%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
T+ + L + N+F +N++I E L F S+RK L TFP +K
Sbjct: 60 QTHYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLK 119
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI 141
+C+ + G H GF+ DV ++L+ +YS G L+DA K+F+EIP+R ++
Sbjct: 120 ACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPER--SV 177
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
V+WT++ +GY REA+ LFK+ + E G V DS I VLSAC V
Sbjct: 178 VTWTALFSGYTTAGKHREAIDLFKKMV----EMG--------VRPDSYFIVQVLSAC--V 223
Query: 202 TVNGVTEGAHGFVIKRGFDSEVG----VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
V + G +++K + E+ V TL++ YA+ G ++ +R VFD M EKD VTW
Sbjct: 224 HVGDLDSGE--WIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTW 281
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
+++I YA N E ++ F QM++ ++K + ++ L + A LG L LG+ +
Sbjct: 282 STMIQGYASNSFPKEGIEFFLQMLQE-NLKPDQFSIVGFLSSCASLGALDLGEWGISLID 340
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ + ++ + ++IDMY KCG + + F +MKEK++ A I+G + + +
Sbjct: 341 RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFA 400
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
+F + K G+ P+ TF+ +L C HAGL+Q+G + N + + ++ VEHYGCMVDL
Sbjct: 401 VFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLW 460
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GRAG L +AY LI M ++ + +VWG+LL CR+ K+ L E K+L LEP N G +V
Sbjct: 461 GRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYV 520
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
LSNIY+ +GRW++ R +M + + K PG+S +EL G VH FL DK HP +KIY
Sbjct: 521 QLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYA 580
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
LE+L +++ +G+V V DV+ EEKE L HSEKLA
Sbjct: 581 KLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVK 640
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH V++LISK+ REIVVRD+ RFH F +G CSC DYW
Sbjct: 641 NLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/555 (41%), Positives = 332/555 (59%), Gaps = 37/555 (6%)
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
+FVS++L+ MY+K G L DA +LF +PQR N+VSWT+++ ++ L F
Sbjct: 107 LFVSNSLVSMYAKFGMLDDALELFGGMPQR--NVVSWTTVVAALANAPGRKKEAL---RF 161
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN 227
L+E D V +S +SVL AC GV H +IK G DS+V V +
Sbjct: 162 LVEMRR--------DGVAANSYTFSSVLGACG---TPGVLAAMHADIIKVGLDSDVFVRS 210
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
+LIDAY + G +D R VFD M+ D V WNSIIA +AQ+G A+++F +M K +
Sbjct: 211 SLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRM-KESGFL 269
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
N TL++VL A + +L +G+ +H V+K D +I+ +++DMYCKCG + A
Sbjct: 270 ANQGTLTSVLRACTGMVMLEVGRQVHAHVLKYD--RDLILHNALLDMYCKCGCLLDADAL 327
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F++M +++V SW+ MI+G + R+ EAL +F M G PN IT V VL ACSHAGLV
Sbjct: 328 FSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLV 387
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
++GWH+ +M F I+P EH CMVDLLGRAGKL EA I MK + D V+W +LLG
Sbjct: 388 EDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLG 447
Query: 468 ACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKT 527
ACR+HKN L AA ++ +LEP + G +LLSNIYA+ +W + E++ M+++ + K
Sbjct: 448 ACRMHKNATLASYAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKE 507
Query: 528 PGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEK 587
PG S +EL VH F+ G+ HP ++I + L L + +++GYV V+ D+ E+K
Sbjct: 508 PGRSWIELGKLVHVFIAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQK 567
Query: 588 EMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
E L+ HSEKLA NLR+CGDCH +L+SK + I++RD R
Sbjct: 568 EDLLKYHSEKLAIAFGTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVR 627
Query: 630 FHYFKDGLCSCGDYW 644
FH+F+ G+CSCGDYW
Sbjct: 628 FHHFQHGVCSCGDYW 642
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 175/363 (48%), Gaps = 24/363 (6%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARG-GDSVEALRAFSSMRKLS 68
+S+VS K + LF + + NV SW +V+A LA G EALR MR+
Sbjct: 111 NSLVSMYAKFGMLDDALELFGG-MPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDG 169
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
+ TF + +C L + H G DVFV S+LID Y K G+L R
Sbjct: 170 VAANSYTFSSVLGACGTPGVLAA---MHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGR 226
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
+FDE+ ++V W S++ G+ Q+ + A+ LF ++ES +
Sbjct: 227 GVFDEMVT--CDLVVWNSIIAGFAQSGDGVGAMELFMR--MKES----------GFLANQ 272
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
+ SVL AC+ + + V H V+K +D ++ + N L+D Y + G + + +F
Sbjct: 273 GTLTSVLRACTGMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSR 330
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M ++D ++W+++I+ AQNG + EAL VFD M K+ N +T+ VL A +H G++
Sbjct: 331 MHDRDVISWSTMISGLAQNGRSVEALKVFDLM-KAEGPTPNNITMVGVLFACSHAGLVED 389
Query: 309 GKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGY 366
G + K+ ++ ++D+ + G++D A K +MK E + W ++
Sbjct: 390 GWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGAC 449
Query: 367 GMH 369
MH
Sbjct: 450 RMH 452
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
LF++ D++ V SW+++I+ LA+ G SVEAL+ F M+ TP T + +CS
Sbjct: 326 ALFSRMHDRD-VISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHA 384
Query: 87 HDLHSGKQAHQQA-FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ G + +FG + + ++D+ + G+L +A K E+ +++ W
Sbjct: 385 GLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVI-WR 443
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
++L + NA A E L E E GA N++ D
Sbjct: 444 TLLGACRMHKNATLASYAATEILKLEPEDQGARILLSNIYAD 485
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/579 (41%), Positives = 351/579 (60%), Gaps = 49/579 (8%)
Query: 106 RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
R++ ++++ Y+K G+L AR+ FDE+P+R ++VSW +M + Y Q + +EAL LF
Sbjct: 190 RNIITWTSMVTGYAKMGDLESARRYFDEMPER--SVVSWNAMQSAYAQKECPKEALNLFH 247
Query: 166 EFLLEE------------SECG--GASENSDNVF--VDSVAIASVLSACSRVTVNGVTEG 209
+ L E S C G +D++ +D I VL++ + + +
Sbjct: 248 QMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHI--VLNSFVKTALLDMHAK 305
Query: 210 AHGFVIKRGFDSEVG------VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
I R E+G N +I AY R G + ++R++FD M ++D V+WNS+IA
Sbjct: 306 FGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAG 365
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YAQNG +A ++++F +M+ D++ + VT+++VL A H+G L+L + D V + +++
Sbjct: 366 YAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKL 425
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ S+I MY KCG V A + F M ++V S+ +I+G+ + +EA+ L M
Sbjct: 426 GISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTME 485
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ G+ P+++T++ VL+ACSHAGL+ EG + ++ P V+HY CMVDLLGRAG+L
Sbjct: 486 EEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGEL 540
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
EA LI+ M +K V+GSLL A RIHK V LGE+AA KLFELEP N G +VLLSNIY
Sbjct: 541 DEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIY 600
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A+ GRWEDV+R R +MK L K+ G S VE +G+VH F VGD+ H Q + IY+ L EL
Sbjct: 601 ASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELE 660
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
K++ VG+V D + + DV++EEKE L HSEKLA NLR+C
Sbjct: 661 RKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICL 720
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCHT I++ISK+ REIVVRD+ RFH F +G+CSC DYW
Sbjct: 721 DCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 27/267 (10%)
Query: 211 HGFVIKRGFDSE-VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG ++ S V LI+ H +F DA ++ ++ Y++ G
Sbjct: 21 HGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYYSRMGA 80
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL----GKCIHDQVIKMDLEESV 325
+ + +F KC +L+ ++ +++L G H V+K+ +
Sbjct: 81 HNQVVSLF---------KCTH-SLNLRPQPFVYIYLIKLAGKSGNMFHAYVLKLGHIDDH 130
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+ +I+DMY K GQVDLAR F QM E+ + W +MI+G EA+ LF M+ A
Sbjct: 131 FIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLF-NMMPA 189
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
N IT+ S+++ + G ++ + + M E V + M + KE
Sbjct: 190 ---RNIITWTSMVTGYAKMGDLESARRYFDEMP-----ERSVVSWNAMQSAYAQKECPKE 241
Query: 446 AYDLIEGM---KVKADFVVWGSLLGAC 469
A +L M + D W + +C
Sbjct: 242 ALNLFHQMLEEGITPDDTTWVVTISSC 268
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/668 (36%), Positives = 370/668 (55%), Gaps = 66/668 (9%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+LF+ + FS N ++ +RG L + +R+ R +FP +K+ S L
Sbjct: 70 SLFSHIPNPPTRFS-NQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKL 128
Query: 87 HDLHSGKQAHQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L+ G + H A FGF H D F+ SALI MY+ CG + DAR LFD++ R++V+W
Sbjct: 129 SALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSH--RDVVTWN 186
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
M+ GY QN + L L++E +E D++ + +VLSAC+
Sbjct: 187 IMIDGYSQNAHYDHVLKLYEEMKTSGTE------------PDAIILCTVLSACAHAGNLS 234
Query: 206 VTEGAHGFVIKRGF-------------------------------DSEVGVGNTLIDAYA 234
+ H F+ GF + V ++ YA
Sbjct: 235 YGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYA 294
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
+ G V +R +FD M+EKD V W+++I+ YA++ EAL +F++M + V + +T+
Sbjct: 295 KLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVP-DQITML 353
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
+V+ A A++G L K IH K ++ + ++IDMY KCG + AR+ F M K
Sbjct: 354 SVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRK 413
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
NV SW++MI + MH A A+ LF++M + + PN +TF+ VL ACSHAGLV+EG +
Sbjct: 414 NVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFF 473
Query: 415 NTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
++M +E I P EHYGCMVDL RA L++A +LIE M + ++WGSL+ AC+ H
Sbjct: 474 SSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGE 533
Query: 475 VDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVE 534
++LGE AA +L ELEP++ G V+LSNIYA RW+DV R LMK++ ++K S +E
Sbjct: 534 IELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIE 593
Query: 535 LRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIH 594
+ +VH F++ D+ H Q ++IY+ L+ + +L+ VGY + ++ D+++EEK+ + H
Sbjct: 594 VNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWH 653
Query: 595 SEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDG 636
SEKLA NLR+C DCH+ ++L+SKV EIV+RD RFH+F G
Sbjct: 654 SEKLALCYGLIGERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGG 713
Query: 637 LCSCGDYW 644
+CSC DYW
Sbjct: 714 ICSCRDYW 721
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 254/695 (36%), Positives = 357/695 (51%), Gaps = 103/695 (14%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN +++ N F WN +I + A + SM L T+P I++CS
Sbjct: 34 IFN-FIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRR 92
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
KQ H GF DV+V + LI+ +S C ++DA ++F+E + + VSW S+
Sbjct: 93 SEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNE--SSVLDSVSWNSI 150
Query: 148 LTGYVQNDNAREA-------------------------------LLLFKEFL-------- 168
L GY++ N EA LF E L
Sbjct: 151 LAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWS 210
Query: 169 -----------LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
EE+ + V VD V S LSAC+ + V + + H +K
Sbjct: 211 ALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKI 270
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRK-------------------------------VF 246
G +S + + N LI Y++ G + V+RK +F
Sbjct: 271 GTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIF 330
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D M EKD V+W+S+I+ YAQN L E L +F +M + + K + TL +V+ A A L L
Sbjct: 331 DSMPEKDVVSWSSMISGYAQNDLFDETLALFQEM-QMSGFKPDETTLVSVISACARLAAL 389
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
GK +H + + L +VI+GT++IDMY KCG V+ A + F M EK + +W A+I G
Sbjct: 390 EQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGL 449
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
M+ +LD+F M K V PN ITF+ VL AC H GLV EG H +M H+ I+P
Sbjct: 450 AMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPN 509
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
V+HYGCMVDLLGRAGKL+EA +L+ M + D WG+LLGAC+ H + ++G +KL
Sbjct: 510 VKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLI 569
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
EL+P++ G+HVLLSNIYA+ G+W+DV R +M R+ K PG S++E G +H FL GD
Sbjct: 570 ELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGD 629
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
K HP + I + L E+ +KL+ GY D+ V+ DVD+EEKE TL HSEKLA
Sbjct: 630 KTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLIN 689
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIV 623
NLR+C DCHT +LISK R+IV
Sbjct: 690 ISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIV 724
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 107/246 (43%), Gaps = 13/246 (5%)
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
H+D +R++F+ + + WN +I Y Q A ++ M+ S + + T ++
Sbjct: 27 HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSML-SNYLGADNYTYPLLI 85
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A + K +H+ V+K+ + V V ++I+ + C + A + FN+ +
Sbjct: 86 QACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSV 145
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SW +++AGY EA ++++M + + I S++ GLV E + M
Sbjct: 146 SWNSILAGYIEIGNVEEAKHIYHQMPERSI----IASNSMIVLFGMRGLVVEACKLFDEM 201
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK---VKADFVVWGSLLGACRIHKN 474
+E + + ++ + +EA GM V D VV S L AC
Sbjct: 202 -----LEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLV 256
Query: 475 VDLGEI 480
V++G++
Sbjct: 257 VNMGKL 262
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/600 (37%), Positives = 353/600 (58%), Gaps = 42/600 (7%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M + + P++++F ++SC+ + G+ H Q GF D+ + + L+D Y+K G+
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L A+++F +P+R ++V+ +M++ ++ EA LF + E + C S +
Sbjct: 61 LKCAKRVFMGMPRR--DVVANNAMISALSKHGYVEEARNLFDN-MTERNSCSWNSMITCY 117
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ + A ++ C+ V +V N +ID Y + + ++
Sbjct: 118 CKLGDINSARLMFDCNPV-------------------KDVVSWNAIIDGYCKSKQLVAAQ 158
Query: 244 KVFDGM-IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
++F M +++VTWN++I+ Y Q G A+ +F QM +S +VK VT+ ++L A AH
Sbjct: 159 ELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQM-QSENVKPTEVTMVSLLSACAH 217
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
LG L +G+ IH + L+ V++G ++IDMYCKCG ++ A F+ + KN+ W ++
Sbjct: 218 LGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSI 277
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
I G GM+ R EA+ F M K G++P+ +TFV +LS CSH+GL+ G + + M +
Sbjct: 278 IVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYG 337
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
+EPGVEHYGCMVDLLGRAG LKEA +LI M +K + +V GSLL AC+IHK+ LGE
Sbjct: 338 LEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVT 397
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
++L EL+P + G +V LSN+YA+ RW+DV R LM R + KTPG S +E+ VH F
Sbjct: 398 QQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEF 457
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
+ GD HPQ +I +L+E+ +L+ G+V + +V+HD+++EEKE +R HSE++A
Sbjct: 458 VAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAF 517
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR C DCH+ ++LIS REI+VRD KRFH+F++G CSC DYW
Sbjct: 518 GLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 48/284 (16%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N +WN++I+ + G+ A+ F M+ ++ PT T + +C+ L L G+ H
Sbjct: 169 NSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIH 228
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
DV + +ALIDMY KCG L A +F + + +NI W S++ G N
Sbjct: 229 GYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSR--KNIFCWNSIIVGLGMNGR 286
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EA+ F++ E E + D V +LS CS +G+ +
Sbjct: 287 GEEAI---AAFIVMEKE---------GIKPDGVTFVGILSGCSH---SGLLSAG-----Q 326
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
R F +GV Y +E + ++ + + G EAL
Sbjct: 327 RYFSEMLGV-------YG---------------LEPGVEHYGCMVDLLGRAGYLKEAL-- 362
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
+++++ +K N++ L ++L A +LG+ + Q++++D
Sbjct: 363 --ELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELD 404
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+F WNS+I L G EA+ AF M K + P TF + CS L +G
Sbjct: 266 LSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAG 325
Query: 93 KQAHQQAF-IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
++ + ++G V ++D+ + G L +A +L +P + ++V + +
Sbjct: 326 QRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQ 385
Query: 152 VQNDNAREALLLFKEFLLEESECGGAS 178
+ D + + LLE C G +
Sbjct: 386 IHKDTKLGEQV--TQQLLELDPCDGGN 410
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/627 (36%), Positives = 357/627 (56%), Gaps = 34/627 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
NV SWN++I ++ GD M R+ + T + +CS H L S K+
Sbjct: 364 NVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEI 423
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H AF GF +D V++A + Y+KC L A ++F + + + SW +++ + QN
Sbjct: 424 HGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGK--TVSSWNALIGAHAQNG 481
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
++L LF + + D I S+L AC+R+ + HGF++
Sbjct: 482 FPGKSLDLFLVMM------------DSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFML 529
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+ G + + +G +L+ Y + + + + +FD M K V WN +I ++QN L EALD
Sbjct: 530 RNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALD 589
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
F QM+ S +K + ++ VL A + + LRLGK +H +K L E V ++IDMY
Sbjct: 590 TFRQML-SGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMY 648
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG ++ ++ F+++ EK+ W +IAGYG+H +A++LF M G RP+ TF+
Sbjct: 649 AKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFL 708
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
VL AC+HAGLV EG +L M + + ++P +EHY C+VD+LGRAG+L EA L+ M
Sbjct: 709 GVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPD 768
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
+ D +W SLL +CR + ++++GE +KKL ELEPN +VLLSN+YA G+W++V +
Sbjct: 769 EPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKV 828
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
R MK L K G S +E+ G V+ FLV D + +KI + +L K+ ++GY D
Sbjct: 829 RQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDT 888
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
+ V+H++++E K L+ HSEKLA NLR+C DCH I+L+SKV
Sbjct: 889 SCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKV 948
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
V R+I+VRD+KRFH+FK+GLC+CGD+W
Sbjct: 949 VKRDIIVRDNKRFHHFKNGLCTCGDFW 975
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 194/395 (49%), Gaps = 17/395 (4%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGK 93
+ ++F +N++++ +R +A+ F + + L P T PC K+C+ + D+ G+
Sbjct: 156 EKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGE 215
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H A G D FV +ALI MY KCG + A K+F+ + R RN+VSW S++ +
Sbjct: 216 AVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETM--RNRNLVSWNSVMYACSE 273
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N E +FK L+ E E + D + +V+ AC+ V + HG
Sbjct: 274 NGGFGECCGVFKRLLISEEE---------GLVPDVATMVTVIPACAAVGEVRMGMVVHGL 324
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
K G EV V N+L+D Y++ G++ +R +FD K+ V+WN+II Y++ G
Sbjct: 325 AFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGV 384
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
++ +M + V+ N VT+ VL A + L K IH + + +V + +
Sbjct: 385 FELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVA 444
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
Y KC +D A + F M+ K V SW A+I + + ++LDLF M+ +G+ P+ T
Sbjct: 445 AYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFT 504
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
S+L AC+ ++ G H F + G+E
Sbjct: 505 IGSLLLACARLKFLRCGKEI-----HGFMLRNGLE 534
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 175/329 (53%), Gaps = 21/329 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHR---DVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
+++C ++H G++ H A + H+ DV +S+ +I MYS CG SD+R +FD +
Sbjct: 99 LRACGHHKNIHVGRKVH--ALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKE 156
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
+++ + ++L+GY +N R+A+ LF E L ++ ++ D+ + V
Sbjct: 157 --KDLFLYNALLSGYSRNALFRDAISLFLELL-----------SATDLAPDNFTLPCVAK 203
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
AC+ V + E H +K G S+ VGN LI Y + G V+ + KVF+ M ++ V+
Sbjct: 204 ACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVS 263
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTD--VKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
WNS++ ++NG E VF +++ S + + + T+ V+ A A +G +R+G +H
Sbjct: 264 WNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHG 323
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
K+ + E V V S++DMY KCG + AR F+ KNV SW +I GY R
Sbjct: 324 LAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRG 383
Query: 375 ALDLFYKMIK-AGVRPNYITFVSVLSACS 402
+L +M + VR N +T ++VL ACS
Sbjct: 384 VFELLQEMQREEKVRVNEVTVLNVLPACS 412
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 146/304 (48%), Gaps = 12/304 (3%)
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV-IKRGFDSEVGVG 226
LL G +SD + AI +L AC V H V ++V +
Sbjct: 75 LLHSHAQNGTVSSSD---ISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLS 131
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
+I Y+ G SR VFD EKD +N++++ Y++N L +A+ +F +++ +TD+
Sbjct: 132 TRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDL 191
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+ TL V A A + + LG+ +H +K VG ++I MY KCG V+ A K
Sbjct: 192 APDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVK 251
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI---KAGVRPNYITFVSVLSACSH 403
F M+ +N+ SW +++ + E +F +++ + G+ P+ T V+V+ AC+
Sbjct: 252 VFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAA 311
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA---YDLIEGMKVKA-DF 459
G V+ G ++ + + I V +VD+ + G L EA +D+ G V + +
Sbjct: 312 VGEVRMGM-VVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNT 370
Query: 460 VVWG 463
++WG
Sbjct: 371 IIWG 374
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 110/239 (46%), Gaps = 21/239 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K +K+ V WN +I ++ EAL F M + P + +CS +
Sbjct: 559 IFDKMENKSLV-CWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVS 617
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK+ H A D FV+ ALIDMY+KCG + ++ +FD + ++ + W +
Sbjct: 618 ALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAV--WNVI 675
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + + +A+ LF+ L++ GG DS VL AC+ + VT
Sbjct: 676 IAGYGIHGHGLKAIELFE--LMQNK--GGRP--------DSFTFLGVLIACNHAGL--VT 721
Query: 208 EGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIA 262
EG + G ++ ++D R G + + K+ + M E D+ W+S+++
Sbjct: 722 EGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLS 780
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 244/627 (38%), Positives = 354/627 (56%), Gaps = 82/627 (13%)
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS--KCGELSDARKLFDEIPQRI 138
++CSA ++ +Q H + FVSS L+ +YS K +L AR +FD I QR
Sbjct: 24 QTCSAPQEV---EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRI-QR- 78
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
R+++ W +++ YV+N + + ++LF E + E D+ + V+ C
Sbjct: 79 RSLIHWNTIIKCYVENQFSHDGIVLFHELVHE-------------YLPDNFTLPCVIKGC 125
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+R+ V + HG +K GF S+V V +L++ Y++ G +D +RKVFDGMI+KD V WN
Sbjct: 126 ARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWN 185
Query: 259 SII------------------------------------------AIYAQNGLAAEALDV 276
S+I A Y NG +A+ +
Sbjct: 186 SLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKM 245
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F M+K +A TL +VL A++ L VL G+ IH + K E I+GTS+I+MY
Sbjct: 246 FFMMLKLGSRPSHA-TLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYA 304
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG ++ A F +++K V WTA+I G G+H A AL LF +M K G++PN I F+
Sbjct: 305 KCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIG 364
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VL+AC+HAGLV +G + + M +E+ IEP +EHYGC+VD+L RAG L+EA + IE M +
Sbjct: 365 VLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPIS 424
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
+ V+W SLLG R H +D+GE AA+++ E+ P G ++LLSN+YA +G WE V R
Sbjct: 425 PNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVR 484
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
+M R K PG S VE +G +H F+VGD HPQ ++IY + E+ KL+ VG+V D T
Sbjct: 485 EMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTT 544
Query: 577 SVIHDVDQE-EKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
V+ ++ E EKE L HSE+LA NLRVC DCH+V +L+SK+
Sbjct: 545 QVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKI 604
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
REI+VRD+ RFH+FK+G CSC DYW
Sbjct: 605 YSREIIVRDNCRFHHFKNGSCSCMDYW 631
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 180/369 (48%), Gaps = 33/369 (8%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++F++ + + ++ WN++I S + + F + L P T PC IK C+ L
Sbjct: 71 SIFDR-IQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARL 128
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR--------- 137
+ GKQ H A GF DVFV +L++MYSKCGE+ ARK+FD + +
Sbjct: 129 GVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLI 188
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKE----------FLLEESECGGASENSDNVFV- 186
N+VSW +M+ GY+++ + AL LF + ++ E G ++ +F
Sbjct: 189 DGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFM 248
Query: 187 --------DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
+ SVLSA S + V G H ++ K GF+ + +G +LI+ YA+ G
Sbjct: 249 MLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGC 308
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
++ + VF + +K W +II +G+A AL +F +M K T +K NA+ VL
Sbjct: 309 IESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCK-TGLKPNAIIFIGVLN 367
Query: 299 AIAHLGVLRLGKCIHDQVI-KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNV 356
A H G++ G+ D ++ + +E ++ ++D+ C+ G ++ A+ M N
Sbjct: 368 ACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNK 427
Query: 357 RSWTAMIAG 365
W +++ G
Sbjct: 428 VIWMSLLGG 436
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/691 (35%), Positives = 371/691 (53%), Gaps = 82/691 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL--SLTPTRSTFPCAIKSCSALHDLH 90
V + + N++I+ AR + A+ F S+ SL P +F + + +HDL
Sbjct: 117 VARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLA 176
Query: 91 SG--KQAHQQAFIFGFHRDVFVSSALIDMYSKC---GELSDARKLFDEIPQRIRNIVSWT 145
Q H G + VS+ALI +Y KC G DARK+ DE+P++ + ++WT
Sbjct: 177 VSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEK--DELTWT 234
Query: 146 SMLTGYVQNDNAREALLLFKEF--------------LLEESECGGASE-----NSDNVFV 186
+++ G+V+ + A F+E ++ C A E S +
Sbjct: 235 TIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPP 294
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD----SEVGVGNTLIDAYARGGHVDVS 242
D S+LSAC+ + HG I+ D + + V N L+ Y++ G + V+
Sbjct: 295 DEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVA 354
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNG-------------------------------LAA 271
K+FD M KD V+WN+I++ Y ++G LA
Sbjct: 355 TKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAE 414
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+AL +F+QM +S DVK T + + A LG L+ GK +H +++ E S G ++
Sbjct: 415 DALKLFNQM-RSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNAL 473
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ MY +CG V AR F M + SW AMI+ G H REAL+LF +M+ G+ P+
Sbjct: 474 LTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDR 533
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
I+F+++L+AC+HAGLV +G+ + +M +F I PG +HY ++DLLGRAG++ EA DLI+
Sbjct: 534 ISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIK 593
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M + +W ++L CRI+ +++LG AA +LF++ P + G ++LLSN Y+ AGRW D
Sbjct: 594 TMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVD 653
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
R R LM++R + K PG S +E+ KVH FLVGD +HP ++Y +LE + K++++GY
Sbjct: 654 AARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGY 713
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
V D + D+ EKE L HSE+LA NL++CGDCHT +
Sbjct: 714 VPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKICGDCHTAMMF 773
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+S+ V REIVVRD +RFH+FKDG CSCG+YW
Sbjct: 774 MSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 24/292 (8%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M L S ++++S + N +F + K+ + SW +++ GG + +AL+
Sbjct: 361 MTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSEL-SWMVMVSGYVHGGLAEDALKL 419
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F+ MR + P T+ A+ +C L L GKQ H GF +AL+ MY++
Sbjct: 420 FNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYAR 479
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG + DAR +F +P + VSW +M++ Q+ + REAL LF + +
Sbjct: 480 CGAVKDARLVFLVMPN--VDSVSWNAMISALGQHGHGREALELFDQMV------------ 525
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF-VIKRGFDSEVGVGN--TLIDAYARGG 237
+ ++ D ++ ++L+AC+ + V +G F ++R F G + LID R G
Sbjct: 526 AQGIYPDRISFLTILTACNHAGL--VDDGFQYFESMERDFGISPGEDHYARLIDLLGRAG 583
Query: 238 HVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNG---LAAEALDVFDQMVKSTD 285
+ +R + M E W +I++ NG L A A D +MV D
Sbjct: 584 RIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHD 635
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/629 (37%), Positives = 368/629 (58%), Gaps = 38/629 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD-LHSGKQA 95
++ SWN++I+ G ++ F + + SL P + T +++CS+L + Q
Sbjct: 1000 DLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQI 1059
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H A G D FVS+ALID+YSK G++ +A LF + Q ++ SW +++ GY+ +
Sbjct: 1060 HACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLF--VNQDGFDLASWNAIMHGYIVSG 1117
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGF 213
+ +AL L+ L++ES E SD + + + A A+ + G+ +G H
Sbjct: 1118 DFPKALRLY--ILMQES-----GERSDQITLVNAAKAAG-------GLVGLKQGKQIHAV 1163
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V+KRGF+ ++ V + ++D Y + G ++ +R+VF + D V W ++I+ +NG A
Sbjct: 1164 VVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHA 1223
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L + QM + + V+ + T + ++ A + L L G+ IH ++K++ V TS++D
Sbjct: 1224 LFTYHQM-RLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVD 1282
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY KCG ++ AR F + + + SW AMI G H A+EAL F M GV P+ +T
Sbjct: 1283 MYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVT 1342
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
F+ VLSACSH+GLV E + +M + IEP +EHY C+VD L RAG+++EA +I M
Sbjct: 1343 FIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSM 1402
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
+A ++ +LL ACR+ + + G+ A+KL LEP++ +VLLSN+YA A +WE+V
Sbjct: 1403 PFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVA 1462
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
R++M+ + K PGFS V+L+ KVH F+ GD+ H + + IY +E + +++E GYV
Sbjct: 1463 SARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVP 1522
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
D + DV++E+KE +L HSEKLA NLRVCGDCH+ I+ IS
Sbjct: 1523 DTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYIS 1582
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
KV REIV+RD+ RFH+F++G+CSCGDYW
Sbjct: 1583 KVFKREIVLRDANRFHHFRNGICSCGDYW 1611
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 241/534 (45%), Gaps = 57/534 (10%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
T LF D ++V WN ++ + G++ EA+ F M + TF + +
Sbjct: 888 TKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAG 947
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L+ L GKQ H G + V V + LI+MY K G +S AR +F ++ + +++SW
Sbjct: 948 LNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNE--VDLISWN 1005
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M++G + ++ +F L D++ D +ASVL ACS ++ G
Sbjct: 1006 TMISGCTLSGLEECSVGMFVHLL------------RDSLLPDQFTVASVLRACS--SLEG 1051
Query: 206 ---VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ H +K G + V LID Y++ G ++ + +F D +WN+I+
Sbjct: 1052 GYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMH 1111
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
Y +G +AL ++ M +S + + + +TL A L L+ GK IH V+K
Sbjct: 1112 GYIVSGDFPKALRLYILMQESGE-RSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFN 1170
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ V + ++DMY KCG+++ AR+ F+++ + +WT MI+G + + AL +++M
Sbjct: 1171 LDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQM 1230
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHW------LNTMGHEF-------------NI 423
+ V+P+ TF +++ ACS +++G LN F NI
Sbjct: 1231 RLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNI 1290
Query: 424 EPG-----------VEHYGCMVDLLGRAGKLKEAYDLIEGMK---VKADFVVWGSLLGAC 469
E + + M+ L + G KEA + MK V D V + +L AC
Sbjct: 1291 EDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSAC 1350
Query: 470 RIHKNVDLGE---IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMK 520
V + +K + +EP Y L+ + + AGR E+ E+ S M
Sbjct: 1351 SHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDAL-SRAGRIEEAEKVISSMP 1403
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 178/397 (44%), Gaps = 51/397 (12%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++ A DL GK+AH + G H D FV++ LI MY+KCG LS ARKLFD P R
Sbjct: 663 LRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNR 722
Query: 140 NIVSWTSMLTGYVQN-DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
++V+W ++L+ + D + + LF+ LL S V +A V C
Sbjct: 723 DLVTWNAILSALAAHADKSHDGFHLFR--LLRRSV----------VSTTRHTLAPVFKMC 770
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+E HG+ +K G +V V L++ YA+ G + +R +FDGM +D V WN
Sbjct: 771 LLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWN 830
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
++ Y L EA+ +F + + T + + VTL + R+ KC +
Sbjct: 831 VMMKAYVDTCLEYEAMLLFSEFHR-TGFRPDDVTLRT---------LSRVVKCKKN---I 877
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
++L++ T + MY G +V W ++ + A EA+D
Sbjct: 878 LELKQFKAYATKLF-MYDDDG--------------SDVIVWNKALSRFLQRGEAWEAVDC 922
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMV 434
F MI + V + +TFV +L+ + ++ L H + G++ C++
Sbjct: 923 FVDMINSRVACDGLTFVVMLTVVAGLNCLE-----LGKQIHGIVMRSGLDQVVSVGNCLI 977
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
++ +AG + A + M + D + W +++ C +
Sbjct: 978 NMYVKAGSVSRARSVFGQMN-EVDLISWNTMISGCTL 1013
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 28 LFNKYVDKN-NVFSWNSVIADLARGGD-SVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
LF+ D N ++ +WN++++ LA D S + F +R+ ++ TR T K C
Sbjct: 713 LFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLL 772
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ + H A G DVFV+ AL+++Y+K G + +AR LFD + +R++V W
Sbjct: 773 SASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMA--VRDVVLWN 830
Query: 146 SMLTGYVQNDNAREALLLFKEF 167
M+ YV EA+LLF EF
Sbjct: 831 VMMKAYVDTCLEYEAMLLFSEF 852
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/574 (39%), Positives = 339/574 (59%), Gaps = 70/574 (12%)
Query: 122 GELSDARKLFDEIPQRIRNIVSWT--SMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
G L AR +F++IP N ++T S++ GY + R+A+L ++ +L+
Sbjct: 26 GSLPYARLVFNQIP----NPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQ--------- 72
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
+ D S+ +C V G + H K GF S+ + NTL++ Y+ G +
Sbjct: 73 ---GLDPDRFTFPSLFKSCG-VLCEG--KQLHCHSTKLGFASDAYIQNTLMNMYSNCGCL 126
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM----------------VKS 283
+RKVFD M+ K V+W ++I YAQ L EA+ +F +M V+
Sbjct: 127 VSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVED 186
Query: 284 TD---------------VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
+D VK + VT++++L+A HLG L LGK +H + K +E V +G
Sbjct: 187 SDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALG 246
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
T+++DMY KCG ++ A + F +M EK+V +WTA+I G M + +AL+LF++M + V+
Sbjct: 247 TALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVK 306
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+ ITFV VL+ACSHAGLV EG + N+M +++ I+P +EHYGCMVD+LGRAG++ EA D
Sbjct: 307 PDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAED 366
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
LI+ M + D+ V LL ACRIH N+ + E AA++L EL+P N G +VLLSNIY++
Sbjct: 367 LIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKN 426
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
WE ++ R LM R + K PG S +E+ G VH F+ GD HPQ +IYE L+++ +L+
Sbjct: 427 WEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKS 486
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
GYV D + V+ D+D++EKE L +HSEKLA NLRVC DCH+
Sbjct: 487 AGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSA 546
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
++ IS+V +REI+VRD RFH+F G CSC D+W
Sbjct: 547 MKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 183/406 (45%), Gaps = 71/406 (17%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ + F+ NS+I +A+ + M L P R TFP KSC L
Sbjct: 34 VFNQ-IPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLC 92
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ GKQ H + GF D ++ + L++MYS CG L ARK+FD++ + ++VSW +M
Sbjct: 93 E---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNK--SVVSWATM 147
Query: 148 LTGYVQNDNAREALLLFKEFLLEES------ECGGASENSD--------------NVFVD 187
+ Y Q D EA+ LF+ + + G E+SD V D
Sbjct: 148 IGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGD 207
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
V +AS+L AC+ + + + H ++ K + +V +G L+D YA+ G ++ + +VF
Sbjct: 208 KVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQ 267
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
M EKD +TW ++I A G +AL++F +M + ++VK +A+T VL A +H G++
Sbjct: 268 EMPEKDVMTWTALIVGLAMCGQGLKALELFHEM-QMSEVKPDAITFVGVLAACSHAGLVN 326
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-----NVRSWTAM 362
G FN M K ++ + M
Sbjct: 327 EGIAY-----------------------------------FNSMPNKYGIQPSIEHYGCM 351
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-HAGLV 407
+ G R EA DL M A P+Y V +LSAC H LV
Sbjct: 352 VDMLGRAGRIAEAEDLIQNMPMA---PDYFVLVGLLSACRIHGNLV 394
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/593 (38%), Positives = 353/593 (59%), Gaps = 44/593 (7%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC-----GELSDARKL 130
F ++ CS+ + KQ I G D SS+ + C G+LS A +
Sbjct: 4 FNLLLQKCSSFSQI---KQLQANLIING---DFHFSSSRTKLLELCAISSFGDLSYALHI 57
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F IP N W +++ G + + A+ ++ A+ N + +D++
Sbjct: 58 FRYIPYPSTN--DWNAVIRGTALSSDPANAVFWYRAM---------AASNGLHR-IDALT 105
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+ L AC+R H +++ GF+++V + TL+DAYA+ G +D+++K+FD M
Sbjct: 106 CSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMP 165
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+ D +WN++IA +AQ A+A+ F +M +++ NAVT+ LLA + LG L+ G+
Sbjct: 166 QPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGE 225
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+H +++ L +V V +IDMY KCG +D A F M+ +K++ +W MI + MH
Sbjct: 226 SVHKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMH 285
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
+ALDLF K+ ++G+ P+ +++++VL AC+HAGLV++G N+M +EP ++H
Sbjct: 286 GDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQR-GLEPNIKH 344
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
YG MVDLLGRAG+LKEAYD++ + + V+W +LLGACR + +V++ E+A++KL E+
Sbjct: 345 YGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTLLGACRTYGDVEMAELASRKLVEMG 403
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
+CG VLLSN+YA RW+DV R R M+ R + KTPGFS +E++GK++ F+ GD+ H
Sbjct: 404 FISCGDFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSH 463
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
+IY L+E+N++++ GY D ++V+HD+ E+KE L HSEKLA
Sbjct: 464 SSCREIYAKLDEINLRIKAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEE 523
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCH VI+LISK+ REI+VRD RFH FK+GLCSC DYW
Sbjct: 524 GTPIQVIKNLRICGDCHVVIKLISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 172/338 (50%), Gaps = 17/338 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC--AIKSCSALHD 88
+Y+ + WN+VI A D A+ + +M + C A+K+C+
Sbjct: 59 RYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALA 118
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
Q H Q FGF+ DV + + L+D Y+K G+L A+KLFDE+PQ +I SW +++
Sbjct: 119 RSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQ--PDIASWNALI 176
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
G+ Q +A++ FK ++ N+ ++V + L ACS++ E
Sbjct: 177 AGFAQGSRPADAIMTFKRMKVD-----------GNLRPNAVTVQGALLACSQLGALKEGE 225
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQN 267
H ++++ +S V V N +ID YA+ G +D + VF+ M +K +TWN++I +A +
Sbjct: 226 SVHKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMH 285
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G +ALD+F+++ +S + +AV+ AVL A H G++ G + + + + LE ++
Sbjct: 286 GDGHKALDLFEKLGRS-GMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQRGLEPNIKH 344
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
S++D+ + G++ A + + N+ W ++
Sbjct: 345 YGSMVDLLGRAGRLKEAYDIVSSLPFPNMVLWQTLLGA 382
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 119/238 (50%), Gaps = 19/238 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSAL 86
LF++ + + ++ SWN++IA A+G +A+ F M+ +L P T A+ +CS L
Sbjct: 160 LFDE-MPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQL 218
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G+ H+ + +V V + +IDMY+KCG + A +F+ + + +++++W +
Sbjct: 219 GALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYWVFENM-RCDKSLITWNT 277
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ + + + +AL LF++ G S S D+V+ +VL AC+ + V
Sbjct: 278 MIMAFAMHGDGHKALDLFEKL--------GRSGMSP----DAVSYLAVLCACNHAGL--V 323
Query: 207 TEGAHGF--VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+G F + +RG + + +++D R G + + + + + V W +++
Sbjct: 324 EDGLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPFPNMVLWQTLLG 381
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/638 (35%), Positives = 372/638 (58%), Gaps = 40/638 (6%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++FN +++ ++ SWN+++A L +EAL+ F R T+ST+ IK C+ L
Sbjct: 257 SVFN-WMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANL 315
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L +Q H GFH V +AL D YSKCGEL+DA +F + RN+VSWT+
Sbjct: 316 KQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIF-SMTTGSRNVVSWTA 374
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+++G +QN + A++LF D V + +++L A +++ +
Sbjct: 375 IISGCIQNGDIPLAVVLFSRM------------REDRVMPNEFTYSAMLKA----SLSIL 418
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H VIK + VG L+ +Y++ G + + +F + +KD V W+++++ +AQ
Sbjct: 419 PPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQ 478
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA--HLGVLRLGKCIHDQVIKMDLEES 324
G A +F++M +K N T+S+V+ A A GV + G+ H IK ++
Sbjct: 479 AGDCEGATYLFNKMAIQ-GIKPNEFTISSVIDACACPSAGVDQ-GRQFHAISIKYRYHDA 536
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+ V ++++ MY + G +D A+ F + ++++ SW +MI+GY H + +A++ F +M
Sbjct: 537 ICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEA 596
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
+G++ + +TF++V+ C+H GLV EG + ++M + I P +EHY CMVDL RAGKL
Sbjct: 597 SGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLD 656
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
E LI M A +VW +LLGACR+HKNV+LG+ +A KL LEP++ +VLLSNIYA
Sbjct: 657 ETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYA 716
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
AG+W++ + R LM R++ K G S ++++ KVH+F+ DK HP ++IY+ L+ +
Sbjct: 717 AAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIIT 776
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
+L++ GY + + V+HD+ +++KE L HSE+LA NLRVCGD
Sbjct: 777 RLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGD 836
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH V++++S + DREI++RD RFH+F G CSCGD+W
Sbjct: 837 CHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 206/435 (47%), Gaps = 21/435 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K NV +W S++ A E + F MR + P TF + + ++ L G
Sbjct: 161 MPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLG 220
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ H Q+ FG VFV ++L++MY+KCG + DA+ +F+ + R++VSW +++ G
Sbjct: 221 QRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWM--ETRDMVSWNTLMAGLQ 278
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N+ EAL LF E + G ++++ A+V+ C+ + + H
Sbjct: 279 LNECELEALQLFHE---SRATMGKMTQST---------YATVIKLCANLKQLALARQLHS 326
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQNGLAA 271
V+K GF V L DAY++ G + + +F ++ V+W +II+ QNG
Sbjct: 327 CVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIP 386
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
A+ +F +M + V N T SA+L A + L IH QVIK + + VGT++
Sbjct: 387 LAVVLFSRM-REDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGTAL 441
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ Y K G + A F +++K+V +W+AM++ + A LF KM G++PN
Sbjct: 442 LASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNE 501
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
T SV+ AC+ + + + ++ + +V + R G + A + E
Sbjct: 502 FTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFE 561
Query: 452 GMKVKADFVVWGSLL 466
+ D V W S++
Sbjct: 562 -RQTDRDLVSWNSMI 575
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 208/436 (47%), Gaps = 41/436 (9%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N V+ D AR G E L FS R+ + +T C +K+C ++ D G+Q H
Sbjct: 68 NRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVK 127
Query: 102 FGFHR-DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
G R +V ++L+DMY KCG + + ++F+ +P+ +N+V+WTS+LTG E
Sbjct: 128 CGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPK--KNVVTWTSLLTGCAHAQMHSEV 185
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
+ LF ++ ++ + ASVLSA + + + H +K G
Sbjct: 186 MALFFRM------------RAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCR 233
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
S V V N+L++ YA+ G V+ ++ VF+ M +D V+WN+++A N EAL +F +
Sbjct: 234 SSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHE- 292
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
++T K T + V+ A+L L L + +H V+K + V T++ D Y KCG+
Sbjct: 293 SRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGE 352
Query: 341 VDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF----- 394
+ A F+ +NV SWTA+I+G + A+ LF +M + V PN T+
Sbjct: 353 LADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLK 412
Query: 395 --VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
+S+L HA +++ + + ++G LL K D +
Sbjct: 413 ASLSILPPQIHAQVIKTNYQHIPSVG---------------TALLASYSKFGSTEDALSI 457
Query: 453 MKV--KADFVVWGSLL 466
K+ + D V W ++L
Sbjct: 458 FKMIEQKDVVAWSAML 473
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 178/377 (47%), Gaps = 20/377 (5%)
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
AR DEIP+R V +L Y + E L F + V V
Sbjct: 51 ARYPLDEIPRR-DAAVGANRVLFDYARRGMVPEVLDQF------------SVARRGGVLV 97
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD-SEVGVGNTLIDAYARGGHVDVSRKV 245
DS ++ VL AC V + E H +K G D EV G +L+D Y + G V +V
Sbjct: 98 DSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEV 157
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F+GM +K+ VTW S++ A + +E + +F +M ++ + N T ++VL A+A G
Sbjct: 158 FEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRM-RAEGIWPNPFTFASVLSAVASQGA 216
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L LG+ +H Q +K SV V S+++MY KCG V+ A+ FN M+ +++ SW ++AG
Sbjct: 217 LDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAG 276
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN-TMGHEFNIE 424
++ EAL LF++ + T+ +V+ C++ + + + H F++
Sbjct: 277 LQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLT 336
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
V + D + G+L +A ++ + V W +++ C + ++ L + +
Sbjct: 337 GNV--MTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSR 394
Query: 485 LFE--LEPNNCGYHVLL 499
+ E + PN Y +L
Sbjct: 395 MREDRVMPNEFTYSAML 411
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
S++VS + + +F + D++ V SWNS+I+ A+ G S++A+ F M +
Sbjct: 541 SALVSMYSRKGNIDSAQIVFERQTDRDLV-SWNSMISGYAQHGYSMKAIETFRQMEASGI 599
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVS------SALIDMYSKCGE 123
TF I C+ H+G Q + RD ++ + ++D+YS+ G+
Sbjct: 600 QMDGVTFLAVIMGCT-----HNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGK 654
Query: 124 LSDARKLFDEIPQRIRNIVSWTSML 148
L + L ++P +V W ++L
Sbjct: 655 LDETMSLIRDMPFPAGAMV-WRTLL 678
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/642 (37%), Positives = 367/642 (57%), Gaps = 39/642 (6%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
+N LF+K + K + SWN++I+ G +E L FS MR+LS+ P T +
Sbjct: 250 SNARMLFDK-MPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASA 308
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
C L + G+ H F D+ ++++LI MYS G L +A +F + + ++V
Sbjct: 309 CELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK--DVV 366
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
SWT+M+ V + +A+ +K LE + D + + SVLSAC+ +
Sbjct: 367 SWTAMIASLVSHKLPFKAVETYKMMELE------------GILPDEITLVSVLSACACIG 414
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ H IK G S V V N+LID Y++ VD + +VF + K+ V+W S+I
Sbjct: 415 HLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLIL 474
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
N + EAL F QM +S +K N+VTL +VL A A +G L GK IH ++ +
Sbjct: 475 GLRINNRSFEALLFFRQMKES--MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVG 532
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ +I+DMY +CG+ A FN K K+V +W ++ GY +A+ A++LF KM
Sbjct: 533 FDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKM 591
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
++ + P+ ITF+S+L ACS +G+V EG + N M +++N+ P ++HY C+VD+LGRAG+
Sbjct: 592 LELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQ 651
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
L +AYD I+ M ++ D +WG+LL ACRIH+NV+LGEIAAK++FE + + GY++LL N+
Sbjct: 652 LDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNL 711
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
YA G W+ V + RSLM+ R L+ PG S VE++GKVHAFL GD H Q ++I L+
Sbjct: 712 YAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGF 771
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVC 604
K++E G+ +S +++ ++ HSE+ A NL +C
Sbjct: 772 CSKMKENGFGNLKSSFTSEIESSRADIFCG-HSERQAIAFGLINTAPGMPIWVXKNLYMC 830
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD--YW 644
CH +++ IS +V REI VRD + +H+FKDG+CSCGD YW
Sbjct: 831 HSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 164/499 (32%), Positives = 259/499 (51%), Gaps = 27/499 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F K +++ VFSWN ++ A+ G EAL + M + P TFP +K+C+ +
Sbjct: 154 VFGKMSERD-VFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVS 212
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D+ GK+ H FGF DV V +ALI MY KCG++S+AR LFD++P+R R +SW +M
Sbjct: 213 DIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDR--ISWNAM 270
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY +N E L LF ++ E +V D + + +V SAC + +
Sbjct: 271 ISGYFENGGGLEGLELFS--MMREL----------SVDPDLITMTTVASACELLDNERLG 318
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
G HG+V+K F ++ + N+LI Y+ G ++ + VF M KD V+W ++IA +
Sbjct: 319 RGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSH 378
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
L +A++ + +M++ + + +TL +VL A A +G L LG +H+ IK L VIV
Sbjct: 379 KLPFKAVETY-KMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIV 437
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
S+IDMY KC VD A + F + KNV SWT++I G ++ R+ EAL LF++ +K +
Sbjct: 438 SNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEAL-LFFRQMKESM 496
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY--GCMVDLLGRAGKLKE 445
+PN +T +SVLSAC+ G + G H G + + ++D+ R G+
Sbjct: 497 KPNSVTLISVLSACARIGALMRG---KEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVP 553
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE--PNNCGYHVLLSNIY 503
A + K D W LL L K+ ELE P+ + LL
Sbjct: 554 ALNQFNSQ--KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACS 611
Query: 504 ANAGRWEDVERTRSLMKNR 522
+ E +E ++MKN+
Sbjct: 612 KSGMVTEGLEYF-NIMKNK 629
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 139/269 (51%), Gaps = 8/269 (2%)
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
V +GN L+ + R G++ + VF M E+D +WN ++ YA+ G EAL+++ +M+
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
+ +++ N T +VL A + + GK IH VI+ E V VG ++I MY KCG +
Sbjct: 192 A-EIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDIS 250
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
AR F++M +++ SW AMI+GY + E L+LF M + V P+ IT +V SAC
Sbjct: 251 NARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACE 310
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPG--VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
L+ G+ E G + ++ + G+L+EA + M+ K D V
Sbjct: 311 ---LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK-DVV 366
Query: 461 VWGSLLGACRIHKNVDLGEIAAKKLFELE 489
W +++ + HK + + K+ ELE
Sbjct: 367 SWTAMIASLVSHK-LPFKAVETYKMMELE 394
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/572 (40%), Positives = 344/572 (60%), Gaps = 35/572 (6%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDM-YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
+Q H + I G R + + L+ Y+ +S R+LF IP+ + + S++T
Sbjct: 36 QQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKP--DTFLFHSLITLT 93
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+ +E+LL ++ LL N+ + ++V+ + + +T + E H
Sbjct: 94 SKFSFPQESLLCYRRMLLA------------NISSSNYTFSAVIKSSADLTAFSIGETIH 141
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
V G+ + V L+ YA+ GHV ++RKVFD M EK V WNS+I+ Y QNG
Sbjct: 142 CHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGK 201
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA+++F M + VK ++ T ++L A A +G + LG +H+ + + + +V++GT++
Sbjct: 202 EAVELFFLM-QDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTAL 260
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
++MY +CG V AR+ F+ M+EKN+ +WTAMI+GYGMH +A++LF +M G RPN
Sbjct: 261 MNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNN 320
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+TFV+VLSAC+HAGLV EG TM E+ + P VEH CMVD+LGRAG L EAY I+
Sbjct: 321 VTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIK 380
Query: 452 GMKVKADF-VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
K VW ++LGAC++HKN DLG A+ L +EP N G++V+LSNIYA AGR +
Sbjct: 381 NTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMD 440
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
VE+ R++M RL K G+S +++ KV+ F +GDK HP+ +IY YL+EL + +E G
Sbjct: 441 RVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSRCREAG 500
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
Y+ SV+H+V++EE+E LR HSEKLA NLR+C DCHT I+
Sbjct: 501 YIPASESVMHEVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIK 560
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
IS + +REI VRD RFH+FKDG CSC DYW
Sbjct: 561 YISIIANREINVRDRLRFHHFKDGSCSCQDYW 592
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 183/341 (53%), Gaps = 20/341 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K + F ++S+I ++ E+L + M +++ + TF IKS + L G
Sbjct: 78 IPKPDTFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIG 137
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H +I G+ D +V +AL+ Y+K G + ARK+FD++P+ + +V+W SM++GY
Sbjct: 138 ETIHCHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPE--KTVVAWNSMISGYE 195
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN +EA+ LF FL+++ V DS S+LSAC++V G+ H
Sbjct: 196 QNGFGKEAVELF--FLMQDL----------GVKPDSSTFVSLLSACAQVGAIGLGFWVHE 243
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++ + FD V +G L++ Y+R G+V +R+VFD M EK+ V W ++I+ Y +G ++
Sbjct: 244 YIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQ 303
Query: 273 ALDVFDQMVKSTD-VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTS 330
A+++F++M S D + N VT AVL A AH G++ G+ I + + L SV
Sbjct: 304 AIELFNEM--SFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVC 361
Query: 331 IIDMYCKCGQVDLARKAFNQM--KEKNVRSWTAMIAGYGMH 369
++DM + G ++ A + KE WTAM+ MH
Sbjct: 362 MVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMH 402
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 119/240 (49%), Gaps = 22/240 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K +K V +WNS+I+ + G EA+ F M+ L + P STF + +C+ +
Sbjct: 175 VFDKMPEKT-VVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVG 233
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G H+ F +V + +AL++MYS+CG +S AR++FD + + +NIV+WT+M
Sbjct: 234 AIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEE--KNIVAWTAM 291
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY + + +A+ LF E + G N +V +VLSAC+ + V
Sbjct: 292 ISGYGMHGHGSQAIELFNEMSFD-----GPRPN-------NVTFVAVLSACAHAGL--VD 337
Query: 208 EGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT--WNSIIA 262
EG F + G V ++D R GH++ + + K+ W +++
Sbjct: 338 EGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLG 397
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/642 (37%), Positives = 367/642 (57%), Gaps = 39/642 (6%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
+N LF+K + K + SWN++I+ G +E L FS MR+LS+ P T +
Sbjct: 250 SNARMLFDK-MPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASA 308
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
C L + G+ H F D+ ++++LI MYS G L +A +F + + ++V
Sbjct: 309 CELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK--DVV 366
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
SWT+M+ V + +A+ +K LE + D + + SVLSAC+ +
Sbjct: 367 SWTAMIASLVSHKLPFKAVETYKMMELE------------GILPDEITLVSVLSACACIG 414
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ H IK G S V V N+LID Y++ VD + +VF + K+ V+W S+I
Sbjct: 415 HLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLIL 474
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
N + EAL F QM +S +K N+VTL +VL A A +G L GK IH ++ +
Sbjct: 475 GLRINNRSFEALLFFRQMKES--MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVG 532
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ +I+DMY +CG+ A FN K K+V +W ++ GY +A+ A++LF KM
Sbjct: 533 FDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKM 591
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
++ + P+ ITF+S+L ACS +G+V EG + N M +++N+ P ++HY C+VD+LGRAG+
Sbjct: 592 LELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQ 651
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
L +AYD I+ M ++ D +WG+LL ACRIH+NV+LGEIAAK++FE + + GY++LL N+
Sbjct: 652 LDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNL 711
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
YA G W+ V + RSLM+ R L+ PG S VE++GKVHAFL GD H Q ++I L+
Sbjct: 712 YAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGF 771
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVC 604
K++E G+ +S +++ ++ HSE+ A NL +C
Sbjct: 772 CSKMKENGFGNLKSSFTSEIESSRADIFCG-HSERQAIAFGLINTAPGMPIWVTKNLYMC 830
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD--YW 644
CH +++ IS +V REI VRD + +H+FKDG+CSCGD YW
Sbjct: 831 HSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 164/499 (32%), Positives = 259/499 (51%), Gaps = 27/499 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F K +++ VFSWN ++ A+ G EAL + M + P TFP +K+C+ +
Sbjct: 154 VFGKMSERD-VFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVS 212
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D+ GK+ H FGF DV V +ALI MY KCG++S+AR LFD++P+R R +SW +M
Sbjct: 213 DIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDR--ISWNAM 270
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY +N E L LF ++ E +V D + + +V SAC + +
Sbjct: 271 ISGYFENGGGLEGLELFS--MMREL----------SVDPDLITMTTVASACELLDNERLG 318
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
G HG+V+K F ++ + N+LI Y+ G ++ + VF M KD V+W ++IA +
Sbjct: 319 RGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSH 378
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
L +A++ + +M++ + + +TL +VL A A +G L LG +H+ IK L VIV
Sbjct: 379 KLPFKAVETY-KMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIV 437
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
S+IDMY KC VD A + F + KNV SWT++I G ++ R+ EAL LF++ +K +
Sbjct: 438 SNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEAL-LFFRQMKESM 496
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY--GCMVDLLGRAGKLKE 445
+PN +T +SVLSAC+ G + G H G + + ++D+ R G+
Sbjct: 497 KPNSVTLISVLSACARIGALMRG---KEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVP 553
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE--PNNCGYHVLLSNIY 503
A + K D W LL L K+ ELE P+ + LL
Sbjct: 554 ALNQFNSQ--KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACS 611
Query: 504 ANAGRWEDVERTRSLMKNR 522
+ E +E ++MKN+
Sbjct: 612 KSGMVTEGLEYF-NIMKNK 629
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 139/269 (51%), Gaps = 8/269 (2%)
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
V +GN L+ + R G++ + VF M E+D +WN ++ YA+ G EAL+++ +M+
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
+ +++ N T +VL A + + GK IH VI+ E V VG ++I MY KCG +
Sbjct: 192 A-EIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDIS 250
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
AR F++M +++ SW AMI+GY + E L+LF M + V P+ IT +V SAC
Sbjct: 251 NARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACE 310
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPG--VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
L+ G+ E G + ++ + G+L+EA + M+ K D V
Sbjct: 311 ---LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK-DVV 366
Query: 461 VWGSLLGACRIHKNVDLGEIAAKKLFELE 489
W +++ + HK + + K+ ELE
Sbjct: 367 SWTAMIASLVSHK-LPFKAVETYKMMELE 394
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/670 (34%), Positives = 371/670 (55%), Gaps = 63/670 (9%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL--SLTPTRSTFPCAIK 81
++ +LF ++ V S+N+VIA + GG A+R + ++ + S+ P+R T +
Sbjct: 90 DMDSLFASMAQRDTV-SYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVM 148
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI------- 134
+ SAL D G+Q H Q GF + FV S L+ MY+K G + DA+++FDE+
Sbjct: 149 AASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVM 208
Query: 135 ----------------PQRI------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
+R+ R+ ++WT+M+TG+ QN +AL F+ +
Sbjct: 209 YNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQ-- 266
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
+ +D S+L+AC ++ + H ++I+ +D V VG+ L+D
Sbjct: 267 ----------GIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDM 316
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
Y++ + + F M K+ ++W ++I Y QNG + EA+ VF +M + + + T
Sbjct: 317 YSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRD-GIDPDDFT 375
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
L +V+ + A+L L G H + L + V +++ +Y KCG ++ A + F++M
Sbjct: 376 LGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEML 435
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
+ SWTA++ GY RA+E +DLF KM+ V+P+ +TF+ VLSACS AG V++G
Sbjct: 436 FHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCS 495
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ ++M + I P +HY CM+DL R+G+LKEA + I+ M + D + WG+LL ACR+
Sbjct: 496 YFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLR 555
Query: 473 KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSL 532
++++G+ AA+ L E++P N +VLL +++A G W V + R M++R++ K PG S
Sbjct: 556 GDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSW 615
Query: 533 VELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLR 592
++ + KVH F D+ HP + IYE LE LN K+ E GY D++SV+HDV +K +
Sbjct: 616 IKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVS 675
Query: 593 IHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFK 634
HSEKLA NLRVC DCH +LISK+ R+I+VRD+ RFH F
Sbjct: 676 HHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFS 735
Query: 635 DGLCSCGDYW 644
+G+CSCGD+W
Sbjct: 736 NGVCSCGDFW 745
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 209/455 (45%), Gaps = 87/455 (19%)
Query: 114 LIDMYSKCGELSDARKLFDEIPQ----------------RI-------------RNIVSW 144
L+ Y K G + AR++FD P R+ R+ VS+
Sbjct: 47 LLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSY 106
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
+++ G+ A+ L+ L S +V + +++++ A S +
Sbjct: 107 NAVIAGFSGGGAHARAVRLYHTLLRAGS----------SVRPSRITMSAMVMAASALGDR 156
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG--------------------------- 237
+ H +++ GF VG+ L+ YA+ G
Sbjct: 157 ALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGL 216
Query: 238 ----HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
V+ +R++F+ M ++D +TW +++ + QNGL ++AL+ F +M + + + T
Sbjct: 217 LRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRM-RFQGIAIDQYTF 275
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
++L A L L GK IH +I+ +++V VG++++DMY KC + A AF +M
Sbjct: 276 GSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSC 335
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
KN+ SWTA+I GYG + + EA+ +F +M + G+ P+ T SV+S+C++ ++EG +
Sbjct: 336 KNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQF 395
Query: 414 LNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
H + G+ HY +V L G+ G +++A+ L + M D V W +L+
Sbjct: 396 -----HCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFH-DQVSWTALVTGY 449
Query: 470 ----RIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
R + +DL E K +++P+ + +LS
Sbjct: 450 AQFGRAKETIDLFEKMLAK--DVKPDGVTFIGVLS 482
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/661 (35%), Positives = 371/661 (56%), Gaps = 58/661 (8%)
Query: 25 LTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCS 84
L +FN+ + + V WNS+++ + R G S+ R+F+ R L P + K C
Sbjct: 51 LEIVFNQQLTRLAV-PWNSIVSPV-RCGTSISHNRSFA-FRHTDLIPKQFKRFNTNKGCC 107
Query: 85 ALHDLHSGKQAHQ--QAFIFGF---------------------HRDVFVSSALIDMYSKC 121
+ + Q+ +F + D F+ L+ MY K
Sbjct: 108 IFREASQFIVVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKL 167
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G DA++LFDE+P + ++VSW S+++G L F E G N
Sbjct: 168 GYDEDAQRLFDEMPNK--DLVSWNSLMSGLSGRGYLGACLNAFCRMRTES----GRQPNE 221
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
V + SV+SAC+ + + HG V+K G + V N+LI+ Y + G +D
Sbjct: 222 -------VTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDA 274
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ ++F+ M + V+WNS++ I+ NG A + +D+F+ M K + + T+ A+L A
Sbjct: 275 ASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLM-KRAGINPDQATMVALLRACT 333
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
G+ R + IH + + +I+ T+++++Y K G+++ + F ++K+++ +WTA
Sbjct: 334 DTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTA 393
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
M+AGY +H REA+ LF M+K GV +++TF +LSACSH+GLV+EG + M +
Sbjct: 394 MLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVY 453
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
+EP ++HY CMVDLLGR+G+L++AY+LI+ M ++ VWG+LLGACR++ NV+LG+
Sbjct: 454 RVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEV 513
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
A++L L+P++ +++LSNIY+ AG W D + R+LMK RRL + PG S +E K+H
Sbjct: 514 AEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHR 573
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
F+VGD+ HP+ ++I+ LEEL K++E G V+HD+D+E K + HSEKLA
Sbjct: 574 FVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIA 633
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
NLR+CGDCH+ + S + R I++RDSKRFH+F DGLCSC DY
Sbjct: 634 FGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDY 693
Query: 644 W 644
W
Sbjct: 694 W 694
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 199/401 (49%), Gaps = 26/401 (6%)
Query: 12 VVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LT 70
+VS K + + LF++ +K+ V SWNS+++ L+ G L AF MR S
Sbjct: 160 LVSMYFKLGYDEDAQRLFDEMPNKDLV-SWNSLMSGLSGRGYLGACLNAFCRMRTESGRQ 218
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P T + +C+ + L GK H G V ++LI+MY K G L A +L
Sbjct: 219 PNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQL 278
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F+E+P +R++VSW SM+ + N A + + LF L++ + + D
Sbjct: 279 FEEMP--VRSLVSWNSMVVIHNHNGYAEKGMDLFN--LMKRA----------GINPDQAT 324
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+ ++L AC+ + E H ++ + GF++++ + L++ YA+ G ++ S +F+ +
Sbjct: 325 MVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK 384
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
++D + W +++A YA + EA+ +FD MVK V+ + VT + +L A +H G++ GK
Sbjct: 385 DRDRIAWTAMLAGYAVHACGREAIKLFDLMVKE-GVEVDHVTFTHLLSACSHSGLVEEGK 443
Query: 311 CIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAG--- 365
+ + ++ +E + + ++D+ + G+++ A + M E + W A++
Sbjct: 444 KYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRV 503
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
YG +E + + + R NYI ++ SA AGL
Sbjct: 504 YGNVELGKEVAEQLLSLDPSDHR-NYIMLSNIYSA---AGL 540
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 131/265 (49%), Gaps = 27/265 (10%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
K+ V+S+++ K + LF + + ++ SWNS++ G + + + F+ M
Sbjct: 255 KAKVVNSLINMYGKLGFLDAASQLFEE-MPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLM 313
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ-QAFIF--GFHRDVFVSSALIDMYSKC 121
++ + P ++T +++C+ D G+QA A+I GF+ D+ +++AL+++Y+K
Sbjct: 314 KRAGINPDQATMVALLRACT---DTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL 370
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G L+ + +F+EI R R ++WT+ML GY + REA+ LF + E E
Sbjct: 371 GRLNASEDIFEEIKDRDR--IAWTAMLAGYAVHACGREAIKLFDLMVKEGVE-------- 420
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR---GFDSEVGVGNTLIDAYARGGH 238
VD V +LSACS + V EG F I + + + ++D R G
Sbjct: 421 ----VDHVTFTHLLSACSHSGL--VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGR 474
Query: 239 VDVSRKVFDGM-IEKDAVTWNSIIA 262
++ + ++ M +E + W +++
Sbjct: 475 LEDAYELIKSMPMEPSSGVWGALLG 499
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 253/697 (36%), Positives = 375/697 (53%), Gaps = 103/697 (14%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LFN ++ N VF + S++ + D + + + M+ + P +P IKS
Sbjct: 56 LFNSTLNPN-VFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGT-- 112
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK------------------ 129
G H G D FV +A+IDMY++ G + ARK
Sbjct: 113 ---GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169
Query: 130 ---------------LFDEIPQRI-----------------------------RNIVSWT 145
LFD +P+R R++VSW
Sbjct: 170 VSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWN 229
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+ML+GY QN A EAL LF E + + + D +V+SACS
Sbjct: 230 AMLSGYAQNGLAEEALRLFDEMV------------NAGIEPDETTWVTVISACSSRGDPC 277
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ + ++ V L+D YA+ G +D +RK+F+ M ++ VTWNS+IA YA
Sbjct: 278 LAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYA 337
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QNG +A A+++F +M+ + + + VT+ +V+ A HLG L LG + + + ++ S+
Sbjct: 338 QNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSI 397
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
++I MY +CG ++ A++ F +M ++V S+ +I+G+ H EA++L M +
Sbjct: 398 SGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEG 457
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ P+ +TF+ VL+ACSHAGL++EG ++ +P ++HY CMVDLLGR G+L++
Sbjct: 458 GIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELED 512
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A +E M ++ V+GSLL A RIHK V+LGE+AA KLFELEP+N G +LLSNIYA+
Sbjct: 513 AKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYAS 572
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
AGRW+DVER R MK + KT G+S VE GK+H F+V D+ H + + IY+ L EL K
Sbjct: 573 AGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKK 632
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++E GY+ D + V+ DV++EEKE + HSEKLA NLRVC DC
Sbjct: 633 MREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDC 692
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
HT I++ISK+ R I+VRD+ RFH F DGLCSC DYW
Sbjct: 693 HTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/528 (42%), Positives = 311/528 (58%), Gaps = 70/528 (13%)
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D V++ +VL AC+ + + HG ++ G ++ VGN L+D YA+ G VD + KVF
Sbjct: 12 DVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVF 71
Query: 247 DGMIEKDAVTWNS-----------------------------------IIAIYAQNGLAA 271
D + EKD V+WN+ +IA +AQ GL
Sbjct: 72 DRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGC 131
Query: 272 EALDVFDQMV--KSTD--------------VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
E LDVF +M ++ D VK N T+S L+A A L LRLG+ IH
Sbjct: 132 ETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAY 191
Query: 316 VIKMDLEESVI-VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
+++ + + + V +IDMY K G +D+AR F+ +K+KN SWT+++ GYGMH R +E
Sbjct: 192 ILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKE 251
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
AL++F +M + G++P+ +T + VL ACSH+G++ +G + N+M EF + PG EHY CMV
Sbjct: 252 ALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMV 311
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCG 494
DLLGRAG+L EA +LIEGM+++ +VW +LL CRIH NV+LGE AAK+L EL N G
Sbjct: 312 DLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDG 371
Query: 495 YHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEK 554
+ LLSNIYANA RW+DV R RSLMKN + K PG S V+ + F V DK HPQ ++
Sbjct: 372 SYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQSKQ 431
Query: 555 IYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------------- 599
IYE L L +++ +GYV + + +HDVD EEK L HSEKLA
Sbjct: 432 IYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGAPIR 491
Query: 600 ---NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH I IS ++D EI++RDS RFH+FK G CSC YW
Sbjct: 492 ITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 170/349 (48%), Gaps = 52/349 (14%)
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
+ + P + + +C+++ GK H A G D+FV +AL+DMY+KCG + +
Sbjct: 7 IDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDE 66
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG----------- 175
A K+FD I + +++VSW +M+ GY Q +AL LF++ E E
Sbjct: 67 ASKVFDRIKE--KDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAF 124
Query: 176 ------------------GASENSDNVF-----------VDSVAIASVLSACSRVTVNGV 206
G + ++ +F + I+ L AC+R+ +
Sbjct: 125 AQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRL 184
Query: 207 TEGAHGFVIKRGFDSE-VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
H ++++ FDS + V N LID YA+ G +DV+R VFD + +K+ V+W S++ Y
Sbjct: 185 GRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYG 244
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+G EAL+VFD+M + ++ + VTL VL A +H G++ G + + K E V
Sbjct: 245 MHGRGKEALEVFDEM-RRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSK---EFGV 300
Query: 326 IVGTS----IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
I G ++D+ + G+++ A + M+ E + W A+++G +H
Sbjct: 301 IPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIH 349
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 129/265 (48%), Gaps = 51/265 (19%)
Query: 28 LFNKYVDKN---NVFSWNSVIADLA-RG--------------GDSVEALRAFSSMRKLS- 68
LF K ++N NV SW++VIA A RG G++ +AL FS M K
Sbjct: 101 LFEKMREENIELNVVSWSAVIAAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDG 160
Query: 69 -LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRD---VFVSSALIDMYSKCGEL 124
+ P T CA+ +C+ L L G+Q H A+I H D ++V++ LIDMY+K G++
Sbjct: 161 LVKPNCFTISCALIACARLAALRLGRQIH--AYILRNHFDSAFLYVANCLIDMYAKSGDI 218
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
AR +FD + Q+ N VSWTS++TGY + +EAL +F E +
Sbjct: 219 DVARFVFDNLKQK--NFVSWTSLMTGYGMHGRGKEALEVFDEM------------RRVGL 264
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGV------GNTLIDAYARGGH 238
D V + VL ACS + + +G F E GV ++D R G
Sbjct: 265 QPDGVTLLVVLYACSHSGM--IDQGIEFF---NSMSKEFGVIPGQEHYACMVDLLGRAGR 319
Query: 239 VDVSRKVFDGM-IEKDAVTWNSIIA 262
++ + ++ +GM +E ++ W ++++
Sbjct: 320 LNEAMELIEGMQMEPSSIVWVALLS 344
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 77/135 (57%)
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
D++ + V+L VL A A +G GK +H ++ E + VG +++DMY KCG VD A
Sbjct: 8 DMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEA 67
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
K F+++KEK+V SW AM+ GY R +AL LF KM + + N +++ +V++A +
Sbjct: 68 SKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQR 127
Query: 405 GLVQEGWHWLNTMGH 419
GL E M H
Sbjct: 128 GLGCETLDVFREMQH 142
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/583 (38%), Positives = 337/583 (57%), Gaps = 33/583 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++ C+ L GK H A FG D + LI++Y+KCG AR +FD + +R
Sbjct: 64 LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIM--HVR 121
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+IVSW +M+ GY + +AL LF + + + ++S + AC+
Sbjct: 122 SIVSWNTMIAGYTHSGEDVQALKLFSRM------------HREGTHMSEFTLSSTICACA 169
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ H +K DS VG ++D YA+ + + VF+ M E+ VTW+S
Sbjct: 170 AKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSS 229
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+ A Y QNGL EAL +F + + V+ TLSA+L A A L + G +H ++K
Sbjct: 230 LFAGYVQNGLHEEALHLF-RCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKC 288
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
+ V S++D+Y +CGQ++ A F M+ KNV W AMIA + H + EA+ LF
Sbjct: 289 GFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILF 348
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
KM + G+ PN +T++SVLS CSHAGLV++G H+ + + + +EP V HY CMVD+LGR
Sbjct: 349 EKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGR 408
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
+GK EA++L+ M + +WGSLLG+CR + N+ L IAA++LF+LEP+N G HVLL
Sbjct: 409 SGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLL 468
Query: 500 SNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYL 559
SN+YA +G WE+V R +K+ K G S +E +GKVH F+VG+++HP+ IY L
Sbjct: 469 SNVYAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKL 528
Query: 560 EELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NL 601
EE+ ++++ T + +HDV E+KE L+ HSEKLA NL
Sbjct: 529 EEIYHEMRKFARRTSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNL 588
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
R+CGDCH+ +++ + + +R ++VRD+ RFH+FKDG CSCGD+W
Sbjct: 589 RICGDCHSFMKIAAHITERLVIVRDTNRFHHFKDGSCSCGDFW 631
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 174/329 (52%), Gaps = 17/329 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SWN++IA G+ V+AL+ FS M + + T I +C+A + ++ KQ H
Sbjct: 122 SIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLH 181
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A + FV +A++D+Y+KC + DA +F+++P+ R +V+W+S+ GYVQN
Sbjct: 182 TIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPE--RTLVTWSSLFAGYVQNGL 239
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EAL LF+ + V + ++++LSAC+ + + H ++K
Sbjct: 240 HEEALHLFR------------CAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILK 287
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
GF V +L+D YAR G ++ + +F M K+ V WN++IA ++++ + EA+ +
Sbjct: 288 CGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMIL 347
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMY 335
F++M + + N VT +VL +H G++ G+ ++ +E +V+ + ++D+
Sbjct: 348 FEKM-QQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVL 406
Query: 336 CKCGQVDLARKAFNQMK-EKNVRSWTAMI 363
+ G+ D A + N+M E W +++
Sbjct: 407 GRSGKTDEAWELLNKMPFEPTASMWGSLL 435
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 170/344 (49%), Gaps = 6/344 (1%)
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
D +D AI+ L C++ V + HG I G ++ N LI+ Y + G D
Sbjct: 51 DRNLIDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDC 110
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R VFD M + V+WN++IA Y +G +AL +F +M + + TLS+ + A A
Sbjct: 111 ARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHRE-GTHMSEFTLSSTICACA 169
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+ K +H +K+ L+ + VGT+I+D+Y KC + A F +M E+ + +W++
Sbjct: 170 AKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSS 229
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
+ AGY + EAL LF + GV T ++LSAC+ L EG L+ + +
Sbjct: 230 LFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQ-LHAVILKC 288
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
+VD+ R G++++AY L M+ K + V+W +++ + H + I
Sbjct: 289 GFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHK-NVVIWNAMIASFSRHAHSWEAMIL 347
Query: 482 AKKLFELE--PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRR 523
+K+ +L PN Y +LS + ++AG E SL+ + R
Sbjct: 348 FEKMQQLGIFPNEVTYLSVLS-VCSHAGLVEKGRHYFSLLMSDR 390
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 115/238 (48%), Gaps = 21/238 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F K ++ V +W+S+ A + G EAL F ++ + T T + +C++L
Sbjct: 215 VFEKMPERTLV-TWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLA 273
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G Q H GFH + FV+++L+D+Y++CG++ A LF + +N+V W +M
Sbjct: 274 LKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEH--KNVVIWNAM 331
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ + ++ ++ EA++LF++ +F + V SVLS CS + V
Sbjct: 332 IASFSRHAHSWEAMILFEKM------------QQLGIFPNEVTYLSVLSVCSHAGL--VE 377
Query: 208 EGAHGFVI---KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
+G H F + R + V + ++D R G D + ++ + M E A W S++
Sbjct: 378 KGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLL 435
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/637 (36%), Positives = 349/637 (54%), Gaps = 34/637 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ +F K D ++V SWN++I+ G A+ M+ L P +K+C+
Sbjct: 257 SVIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAG 315
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
G+Q H D ++ L+DMY+K L DA K+FD + R +++ W
Sbjct: 316 AGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR--DLILWN 373
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
++++G EA +F + L + G V+ +A+VL + + +
Sbjct: 374 ALISGCSHGGRHDEAFSIF--YGLRKEGLG----------VNRTTLAAVLKSTASLEAAS 421
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
T H K GF + V N LID+Y + + + +VF+ D + S+I +
Sbjct: 422 ATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALS 481
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q A+ +F +M++ ++ + LS++L A A L GK +H +IK
Sbjct: 482 QCDHGEGAIKLFMEMLRKG-LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDA 540
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
G +++ Y KCG ++ A AF+ + E+ V SW+AMI G H + AL+LF +M+
Sbjct: 541 FAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE 600
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ PN+IT SVL AC+HAGLV E + N+M F I+ EHY CM+DLLGRAGKL +
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A +L+ M +A+ VWG+LLGA R+HK+ +LG++AA+KLF LEP G HVLL+N YA+
Sbjct: 661 AMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYAS 720
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
+G W +V + R LMK+ + K P S VE++ KVH F+VGDK HP ++IY L+EL
Sbjct: 721 SGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDL 780
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
+ + GY+ ++ +HD+D+ EKE+ L HSE+LA NLR+C DC
Sbjct: 781 MSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDC 840
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H + IS +V REI++RD RFH+F+DG CSCGDYW
Sbjct: 841 HMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 192/376 (51%), Gaps = 24/376 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ D +V SW+S++ + G A++AF MR + P +K +
Sbjct: 59 VFDEIPDPCHV-SWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK---CVP 114
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G Q H A GF DVFV++AL+ MY G + DAR++FDE RN VSW +
Sbjct: 115 DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSE-RNAVSWNGL 173
Query: 148 LTGYVQNDNAREALLLFKEFL---LEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++ YV+ND +A+ +F E + ++ +E G + V++AC+
Sbjct: 174 MSAYVKNDQCGDAIQVFGEMVWSGIQPTEFG---------------FSCVVNACTGSRNI 218
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
H V++ G++ +V N L+D Y + G VD++ +F+ M + D V+WN++I+
Sbjct: 219 DAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGC 278
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
NG A+++ QM KS+ + N LS++L A A G LG+ IH +IK + +
Sbjct: 279 VLNGHDHRAIELLLQM-KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSD 337
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+G ++DMY K +D A K F+ M +++ W A+I+G R EA +FY + K
Sbjct: 338 DYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRK 397
Query: 385 AGVRPNYITFVSVLSA 400
G+ N T +VL +
Sbjct: 398 EGLGVNRTTLAAVLKS 413
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 191/383 (49%), Gaps = 15/383 (3%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ + N SWN +++ + +A++ F M + PT F C + +C+
Sbjct: 157 VFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSR 216
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ +G+Q H G+ +DVF ++AL+DMY K G + A +F+++P ++VSW ++
Sbjct: 217 NIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPD--SDVVSWNAL 274
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G V N + A+ E LL+ G NVF+ ++S+L AC+ +
Sbjct: 275 ISGCVLNGHDHRAI----ELLLQMKSSGLVP----NVFM----LSSILKACAGAGAFDLG 322
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
HGF+IK DS+ +G L+D YA+ +D + KVFD M +D + WN++I+ +
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHG 382
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EA +F + K + N TL+AVL + A L + +H K+ V
Sbjct: 383 GRHDEAFSIFYGLRKE-GLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHV 441
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+ID Y KC + A + F + ++ + T+MI A+ LF +M++ G+
Sbjct: 442 VNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGL 501
Query: 388 RPNYITFVSVLSACSHAGLVQEG 410
P+ S+L+AC+ ++G
Sbjct: 502 EPDPFVLSSLLNACASLSAYEQG 524
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 187/391 (47%), Gaps = 38/391 (9%)
Query: 93 KQAHQQAFIFGFH------RDVFVSSA---LIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ A QA + G H + F++S LI YSKC AR++FDEIP VS
Sbjct: 13 RYAAAQALLPGAHLHANLLKSGFLASLRNHLISFYSKCRRPCCARRVFDEIPDPCH--VS 70
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W+S++T Y N R A+ F E C N F V + V A V
Sbjct: 71 WSSLVTAYSNNGLPRSAIQAFHGMRAEGVCC--------NEFALPVVLKCVPDAQLGAQV 122
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD-GMIEKDAVTWNSIIA 262
H + GF S+V V N L+ Y G +D +R+VFD E++AV+WN +++
Sbjct: 123 -------HAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMS 175
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
Y +N +A+ VF +MV S ++ S V+ A + G+ +H V++M E
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSG-IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 234
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ V +++DMY K G+VD+A F +M + +V SW A+I+G ++ A++L +M
Sbjct: 235 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV---EHYGC-MVDLLG 438
+G+ PN S+L AC+ AG L H F I+ ++ G +VD+
Sbjct: 295 KSSGLVPNVFMLSSILKACAGAGAFD-----LGRQIHGFMIKANADSDDYIGVGLVDMYA 349
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
+ L +A + + M + D ++W +L+ C
Sbjct: 350 KNHFLDDAMKVFDWMSHR-DLILWNALISGC 379
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/637 (36%), Positives = 349/637 (54%), Gaps = 34/637 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ +F K D ++V SWN++I+ G A+ M+ L P +K+C+
Sbjct: 164 SVIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAG 222
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
G+Q H D ++ L+DMY+K L DA K+FD + R +++ W
Sbjct: 223 AGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR--DLILWN 280
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
++++G EA +F + L + G V+ +A+VL + + +
Sbjct: 281 ALISGCSHGGRHDEAFSIF--YGLRKEGLG----------VNRTTLAAVLKSTASLEAAS 328
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
T H K GF + V N LID+Y + + + +VF+ D + S+I +
Sbjct: 329 ATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALS 388
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q A+ +F +M++ ++ + LS++L A A L GK +H +IK
Sbjct: 389 QCDHGEGAIKLFMEMLRKG-LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDA 447
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
G +++ Y KCG ++ A AF+ + E+ V SW+AMI G H + AL+LF +M+
Sbjct: 448 FAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE 507
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ PN+IT SVL AC+HAGLV E + N+M F I+ EHY CM+DLLGRAGKL +
Sbjct: 508 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 567
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A +L+ M +A+ VWG+LLGA R+HK+ +LG++AA+KLF LEP G HVLL+N YA+
Sbjct: 568 AMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYAS 627
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
+G W +V + R LMK+ + K P S VE++ KVH F+VGDK HP ++IY L+EL
Sbjct: 628 SGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDL 687
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
+ + GY+ ++ +HD+D+ EKE+ L HSE+LA NLR+C DC
Sbjct: 688 MSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDC 747
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H + IS +V REI++RD RFH+F+DG CSCGDYW
Sbjct: 748 HMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 191/383 (49%), Gaps = 15/383 (3%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ + N SWN +++ + +A++ F M + PT F C + +C+
Sbjct: 64 VFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSR 123
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ +G+Q H G+ +DVF ++AL+DMY K G + A +F+++P ++VSW ++
Sbjct: 124 NIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPD--SDVVSWNAL 181
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G V N + A+ E LL+ G NVF+ ++S+L AC+ +
Sbjct: 182 ISGCVLNGHDHRAI----ELLLQMKSSGLVP----NVFM----LSSILKACAGAGAFDLG 229
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
HGF+IK DS+ +G L+D YA+ +D + KVFD M +D + WN++I+ +
Sbjct: 230 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHG 289
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EA +F + K + N TL+AVL + A L + +H K+ V
Sbjct: 290 GRHDEAFSIFYGLRKEG-LGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHV 348
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+ID Y KC + A + F + ++ + T+MI A+ LF +M++ G+
Sbjct: 349 VNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGL 408
Query: 388 RPNYITFVSVLSACSHAGLVQEG 410
P+ S+L+AC+ ++G
Sbjct: 409 EPDPFVLSSLLNACASLSAYEQG 431
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 173/342 (50%), Gaps = 23/342 (6%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
MR + P +K + D G Q H A GF DVFV++AL+ MY G
Sbjct: 1 MRAEGVCCNEFALPVVLK---CVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL---LEESECGGASEN 180
+ DAR++FDE RN VSW +++ YV+ND +A+ +F E + ++ +E G
Sbjct: 58 MDDARRVFDEAGSE-RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFG----- 111
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+ V++AC+ H V++ G++ +V N L+D Y + G VD
Sbjct: 112 ----------FSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVD 161
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
++ +F+ M + D V+WN++I+ NG A+++ QM KS+ + N LS++L A
Sbjct: 162 IASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM-KSSGLVPNVFMLSSILKAC 220
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
A G LG+ IH +IK + + +G ++DMY K +D A K F+ M +++ W
Sbjct: 221 AGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWN 280
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
A+I+G R EA +FY + K G+ N T +VL + +
Sbjct: 281 ALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTA 322
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 137/264 (51%), Gaps = 12/264 (4%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD-GMIEKDAVTWNSIIAIYAQNGL 269
H + GF S+V V N L+ Y G +D +R+VFD E++AV+WN +++ Y +N
Sbjct: 30 HAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQ 89
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
+A+ VF +MV S ++ S V+ A + G+ +H V++M E+ V
Sbjct: 90 CGDAIQVFGEMVWSG-IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTAN 148
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+++DMY K G+VD+A F +M + +V SW A+I+G ++ A++L +M +G+ P
Sbjct: 149 ALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVP 208
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV---EHYGC-MVDLLGRAGKLKE 445
N S+L AC+ AG L H F I+ ++ G +VD+ + L +
Sbjct: 209 NVFMLSSILKACAGAGAFD-----LGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDD 263
Query: 446 AYDLIEGMKVKADFVVWGSLLGAC 469
A + + M + D ++W +L+ C
Sbjct: 264 AMKVFDWMSHR-DLILWNALISGC 286
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 250/694 (36%), Positives = 369/694 (53%), Gaps = 90/694 (12%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL--HDLHSG 92
+++VF +N++I A GD AL F +MR+ P TF + + ++ G
Sbjct: 110 RDSVF-YNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCG 168
Query: 93 KQAHQQAFIFGFH-RDVFVSSALIDMYSK--------CGELSDARKLFDEIPQRIRNIVS 143
Q H G V +AL+ +Y K C + ARKLFDE+P+R + ++
Sbjct: 169 -QMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKR--DELT 225
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEE------------SECGGASENSD--------N 183
WT+M+TGYV+ND+ A +F E ++E CG E
Sbjct: 226 WTTMITGYVRNDDLNGAREVF-EAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLG 284
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE----VGVGNTLIDAYARGGHV 239
+ D + +++SAC+ V + + H +++K + + V N LI Y + V
Sbjct: 285 IQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKV 344
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIY-------------------------------AQNG 268
D +RK+F M ++ +TWN+I++ Y AQNG
Sbjct: 345 DEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNG 404
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
E L +F QM C+ + L A + LG L G+ +H Q++ + E S+ VG
Sbjct: 405 FGDEGLKLFKQMRLDGFEPCD-FAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVG 463
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
++I MY KCG V+ A F M ++ SW +MIA G H +A++LF +M+K GV
Sbjct: 464 NAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVF 523
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+ ITF++VL+ACSHAGLV++G H+ N+M + I P +HY MVDL RAG A
Sbjct: 524 PDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARI 583
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
+I+ M K VW +LL CRIH N+DLG AA++LF+L P N G +VLLSNIYA+ GR
Sbjct: 584 VIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGR 643
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
W DV + R LM+++ + K P S +E+ KVH F+V D HP+ +Y YLE+L +++++
Sbjct: 644 WNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKK 703
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
+GY+ D V+HD++ E+KE L HSEKLA N+R+CGDCH
Sbjct: 704 LGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNA 763
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +SKV REI+VRD KRFH+FK+G CSC DYW
Sbjct: 764 FKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 184/434 (42%), Gaps = 75/434 (17%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
D + LI Y G L R++F+ P +R+ V + +M+TGY N + AL LF+
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 167 ----------------------FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
F+ E +CG + V+ +SVL+A V V
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVS-SSVLNALLSVYVK 196
Query: 205 GVTE---GAHGFVIKRGFDSEVG-----VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
+E V R E+ T+I Y R ++ +R+VF+ M+E
Sbjct: 197 RASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAA 256
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
WN++I+ Y G EAL + +M + ++ + +T + ++ A A++G ++GK +H +
Sbjct: 257 WNAMISGYVHCGCFQEALTLCRKM-RFLGIQFDDITYTTIISACANVGSFQMGKQMHAYI 315
Query: 317 IKMDLEES----VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
+K +L + + V ++I +YCK +VD ARK F M +N+ +W A+++GY R
Sbjct: 316 LKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRM 375
Query: 373 REA-------------------------------LDLFYKMIKAGVRPNYITFVSVLSAC 401
EA L LF +M G P F L+AC
Sbjct: 376 EEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTAC 435
Query: 402 SHAGLVQEGWHW---LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
S G ++ G L +G+E ++ G M+ + + G ++ A + M D
Sbjct: 436 SVLGALENGRQLHAQLVHLGYESSLSVG----NAMISMYAKCGVVEAAESVFVTMP-SVD 490
Query: 459 FVVWGSLLGACRIH 472
V W S++ A H
Sbjct: 491 LVSWNSMIAALGQH 504
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/659 (35%), Positives = 360/659 (54%), Gaps = 74/659 (11%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ +V SWN +IA L++ G EAL M + + +T+ ++ +C+ L L GKQ
Sbjct: 222 ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQ 281
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H + D +V+SALI++Y+KCG +A+++F+ + R N VSWT ++ G +Q
Sbjct: 282 LHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR--NSVSWTVLIGGSLQY 339
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+ +++ LF + ++ + +D A+A+++S C + H
Sbjct: 340 ECFSKSVELFNQM------------RAELMAIDQFALATLISGCFNRMDLCLGRQLHSLC 387
Query: 215 IKRGFDSEVGVGNTLID-------------------------------AYARGGHVDVSR 243
+K G + + V N+LI AY++ G++ +R
Sbjct: 388 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAR 447
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+ FDGM ++A+TWN+++ Y Q+G + L ++ M+ DV + VT + A +
Sbjct: 448 EFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADI 507
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G +LG I +K L +V V + I MY KCG++ A+K F+ + K+V SW AMI
Sbjct: 508 GANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMI 567
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
GY H ++A F M+ G +P+YI++V+VLS CSH+GLVQEG + + M I
Sbjct: 568 TGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGI 627
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
PG+EH+ CMVDLLGRAG L EA DLI+ M +K VWG+LL AC+IH N +L E+AAK
Sbjct: 628 SPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAK 687
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
+FEL+ + G ++LL+ IY++AG+ +D + R LM+++ + K PG+S +E+ KVH F
Sbjct: 688 HVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFK 747
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
D HPQ I ++EL K+ +GYV + E + HSEKLA
Sbjct: 748 ADDVSHPQVIAIRNKMDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFG 796
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCHTVI+LIS V DRE V+RD RFH+FK G CSCGDYW
Sbjct: 797 IMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 855
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 195/440 (44%), Gaps = 45/440 (10%)
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
A++SC + L + H + G VF+ + L+ Y CG LSDAR+L +
Sbjct: 26 ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLL-RADIKE 84
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
N+++ M+ GY + + +A LF + AS N+ + D+ A +C
Sbjct: 85 PNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV----ASWNT--LMSDTSRPAGSWMSC 138
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV------------- 245
+ + G K F + V L+D + R G+VD + ++
Sbjct: 139 GALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRN 198
Query: 246 ------------------FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
F+ M E+D V+WN +IA +Q+G EAL + +M + V+
Sbjct: 199 SMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK-GVR 257
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
++ T ++ L A A L L GK +H +VI+ + V +++I++Y KCG A++
Sbjct: 258 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 317
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
FN ++++N SWT +I G + ++++LF +M + + +++S C + +
Sbjct: 318 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 377
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
G L+++ + + ++ L + G L+ A + M + D V W S++
Sbjct: 378 CLG-RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER-DIVSWTSMIT 435
Query: 468 ACRIHKNVDLGEIAAKKLFE 487
A N+ I A++ F+
Sbjct: 436 AYSQIGNI----IKAREFFD 451
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 138/323 (42%), Gaps = 53/323 (16%)
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
A+A L +C HG ++ G S V + NTL+ AY G + +R++
Sbjct: 22 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81
Query: 250 I-EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT-----LSAVLLAIAHL 303
I E + +T N ++ YA+ G ++A ++FD+M + N + + ++ L
Sbjct: 82 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ------------- 350
G L + K D V T+++DM+ +CG VD A + F+Q
Sbjct: 142 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 201
Query: 351 ------------------MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
M E++V SW MIA R REAL L +M + GVR +
Sbjct: 202 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 261
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE-----PGVEHY--GCMVDLLGRAGKLKE 445
T+ S L+AC A L GW G + + + P ++ Y +++L + G KE
Sbjct: 262 TYTSSLTAC--ARLFSLGW------GKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKE 313
Query: 446 AYDLIEGMKVKADFVVWGSLLGA 468
A + ++ + + V W L+G
Sbjct: 314 AKRVFNSLQDR-NSVSWTVLIGG 335
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/540 (41%), Positives = 332/540 (61%), Gaps = 32/540 (5%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+S A K+F +I + I N+ W +++ GY + N+ A L++E + S
Sbjct: 69 MSYAHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRV-----------SGL 116
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V D+ ++ A + + + E H VI+ GF S + V N+L+ YA G V +
Sbjct: 117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY 176
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
KVFD M EKD V WNS+I +A+NG EAL ++ +M S +K + T+ ++L A A +
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKI 235
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G L LGK +H +IK+ L ++ ++D+Y +CG+V+ A+ F++M +KN SWT++I
Sbjct: 236 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLI 295
Query: 364 AGYGMHCRAREALDLF-YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
G ++ +EA++LF Y G+ P ITFV +L ACSH G+V+EG+ + M E+
Sbjct: 296 VGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYK 355
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
IEP +EH+GCMVDLL RAG++K+AY+ I+ M ++ + V+W +LLGAC +H + DL E A
Sbjct: 356 IEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFAR 415
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
++ +LEPN+ G +VLLSN+YA+ RW DV++ R M + K PG SLVE+ +VH F
Sbjct: 416 IQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEF 475
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
L+GDK HPQ + IY L+E+ +L+ GYV +++V DV++EEKE + HSEK+A
Sbjct: 476 LMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAF 535
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH I+L+SKV +REIVVRD RFH+FK+G CSC DYW
Sbjct: 536 MLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 179/345 (51%), Gaps = 17/345 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSAL 86
+F+K NVF WN++I A G+S+ A + MR L P T+P IK+ + +
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM 134
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D+ G+ H GF ++V ++L+ +Y+ CG+++ A K+FD++P+ +++V+W S
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWNS 192
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ G+ +N EAL L+ E NS + D I S+LSAC+++ +
Sbjct: 193 VINGFAENGKPEEALALYTEM------------NSKGIKPDGFTIVSLLSACAKIGALTL 240
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H ++IK G + N L+D YAR G V+ ++ +FD M++K++V+W S+I A
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 300
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESV 325
NG EA+++F M + + +T +L A +H G+++ G + + +E +
Sbjct: 301 NGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRI 360
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + GQV A + M + NV W ++ +H
Sbjct: 361 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSA 85
TLF++ VDKN+V SW S+I LA G EA+ F M L P TF + +CS
Sbjct: 278 TLFDEMVDKNSV-SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 86 LHDLHSGKQAHQQAF-IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
+ G + ++ + + ++D+ ++ G++ A + +P + N+V W
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ-PNVVIW 395
Query: 145 TSML 148
++L
Sbjct: 396 RTLL 399
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/659 (36%), Positives = 360/659 (54%), Gaps = 74/659 (11%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ +V SWN +IA L++ G EAL M + + +T+ ++ +C+ L L GKQ
Sbjct: 232 ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQ 291
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H + D +V+SALI++Y+KCG +A+++F+ + R N VSWT ++ G +Q
Sbjct: 292 LHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR--NSVSWTVLIGGSLQY 349
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+ +++ LF + ++ + +D A+A+++S C + H
Sbjct: 350 ECFSKSVELFNQM------------RAELMAIDQFALATLISGCFNRMDLCLGRQLHSLC 397
Query: 215 IKRGFDSEVGVGNTLID-------------------------------AYARGGHVDVSR 243
+K G + + V N+LI AY++ G++ +R
Sbjct: 398 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAR 457
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+ FDGM ++A+TWN+++ Y Q+G + L ++ M+ DV + VT + A +
Sbjct: 458 EFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADI 517
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G +LG I +K L +V V + I MY KCG++ A+K F+ + K+V SW AMI
Sbjct: 518 GANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMI 577
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
GY H ++A F M+ G +P+YI++V+VLS CSH+GLVQEG + + M I
Sbjct: 578 TGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGI 637
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
PG+EH+ CMVDLLGRAG L EA DLI+ M +K VWG+LL AC+IH N +L E+AAK
Sbjct: 638 SPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAK 697
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
+FEL+ + G ++LL+ IY++AG+ +D + R LM+++ + K PG+S +E+ KVH F
Sbjct: 698 HVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFK 757
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
D HPQ I L+EL K+ +GYV + E + HSEKLA
Sbjct: 758 ADDVSHPQVIAIRNKLDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFG 806
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCHTVI+LIS V DRE V+RD RFH+FK G CSCGDYW
Sbjct: 807 IMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 132/554 (23%), Positives = 245/554 (44%), Gaps = 94/554 (16%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTF 76
K + ++ LF++ + + +V SWN++++ + ++ L F SM R P TF
Sbjct: 83 KQGSLSDAEELFDR-MPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTF 141
Query: 77 PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
C +KSC AL Q + F F D V +AL+DM+ +CG + A +LF +I +
Sbjct: 142 CCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIER 201
Query: 137 RI-----------------------------RNIVSWTSMLTGYVQNDNAREALLLFKEF 167
R++VSW M+ Q+ REAL L E
Sbjct: 202 PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 261
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN 227
+ V +DS S L+AC+R+ G + H VI+ + V +
Sbjct: 262 ------------HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
LI+ YA+ G +++VF+ + ++++V+W +I Q ++++++F+QM ++ +
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQM-RAELMA 368
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
+ L+ ++ + L LG+ +H +K +++V S+I +Y KCG + A
Sbjct: 369 IDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFV 428
Query: 348 FNQMKEKNVRSWTAMIAGY---GMHCRAREALD--------------------------- 377
F+ M E+++ SWT+MI Y G +ARE D
Sbjct: 429 FSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGL 488
Query: 378 -LFYKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYG 431
++ M+ + V P+++T+V++ C+ G + G +GH ++ G V
Sbjct: 489 KMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLG---DQIIGH--TVKAGLILNVSVAN 543
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL--- 488
+ + + G++ EA L + + K D V W +++ H +G+ AAK ++
Sbjct: 544 AAITMYSKCGRISEAQKLFDLLNGK-DVVSWNAMITGYSQH---GMGKQAAKTFDDMLSK 599
Query: 489 --EPNNCGYHVLLS 500
+P+ Y +LS
Sbjct: 600 GAKPDYISYVAVLS 613
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 216/483 (44%), Gaps = 58/483 (12%)
Query: 73 RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFD 132
++T A SC AL D +A + +V + +++ Y+K G LSDA +LFD
Sbjct: 42 QNTLLHAYFSCGALSDARRLLRADIK------EPNVITHNIMMNGYAKQGSLSDAEELFD 95
Query: 133 EIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIA 192
+P+R ++ SW ++++GY Q AR L + F+ + S + ++
Sbjct: 96 RMPRR--DVASWNTLMSGYFQ---ARRFLDGLETFV--------SMHRSGDSLPNAFTFC 142
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF------ 246
V+ +C + + G K F + V L+D + R G+VD + ++F
Sbjct: 143 CVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERP 202
Query: 247 -------------------------DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+ M E+D V+WN +IA +Q+G EAL + +M
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH 262
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ V+ ++ T ++ L A A L L GK +H +VI+ + V +++I++Y KCG
Sbjct: 263 RK-GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 321
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
A++ FN ++++N SWT +I G + ++++LF +M + + +++S C
Sbjct: 322 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+ + G L+++ + + ++ L + G L+ A + M + D V
Sbjct: 382 FNRMDLCLG-RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER-DIVS 439
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFE-LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMK 520
W S++ A N+ I A++ F+ ++ N + Y G ED + S M
Sbjct: 440 WTSMITAYSQIGNI----IKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAML 495
Query: 521 NRR 523
+++
Sbjct: 496 SQK 498
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 140/349 (40%), Gaps = 79/349 (22%)
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA----------------- 232
A+A L +C HG ++ G S V + NTL+ A
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 233 ---------------YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
YA+ G + + ++FD M +D +WN++++ Y Q + L+ F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
M +S D NA T V+ + LG L + K D V T+++DM+ +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185
Query: 338 CGQVDLARKAFNQ-------------------------------MKEKNVRSWTAMIAGY 366
CG VD A + F+Q M E++V SW MIA
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE-- 424
R REAL L +M + GVR + T+ S L+AC A L GW G + + +
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTAC--ARLFSLGW------GKQLHAKVI 297
Query: 425 ---PGVEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
P ++ Y +++L + G KEA + ++ + + V W L+G
Sbjct: 298 RSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR-NSVSWTVLIGG 345
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 84/215 (39%), Gaps = 36/215 (16%)
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK----- 346
L+ L + G L + +H +++ + L +V + +++ Y CG + AR+
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 347 ---------------------------AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
F++M ++V SW +++GY R + L+ F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 380 YKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWLNTM-GHEFNIEPGVEHYGCMVDLL 437
M ++G PN TF V+ +C G + L +F +P VE +VD+
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVDMF 183
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
R G + A L ++ F L G +++
Sbjct: 184 VRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLY 218
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/586 (39%), Positives = 351/586 (59%), Gaps = 38/586 (6%)
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID--MYSKCGELSDARKLFDEIPQ 136
AIK C+ + DL QAH +D F++S LI+ + G ++ A ++F
Sbjct: 13 AIKRCTRVGDL-KAIQAHMVRA--NLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHH 69
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
N+ W +++ GY +D+ A+ L+++ L CG + +S VL
Sbjct: 70 P--NLFMWNTIIRGYSISDSPITAIALYRDMFL----CG--------ISPNSYTFGFVLK 115
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
AC ++ + H ++K G D E + N LI YA G +D + +FD M E D+ +
Sbjct: 116 ACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSAS 175
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
W+++++ YAQNG A EAL +F +M ++ +V +A TL++V+ LG L LGK +H +
Sbjct: 176 WSTMVSGYAQNGQAVEALKLFREM-QAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYM 234
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
K ++ V++GT+++ MY KCG +D A K F M E++V +W+ MIAGY +H +AL
Sbjct: 235 DKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKAL 294
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDL 436
LF M ++ PN +TF SVLSACSH+GLV++G TM E+ I P ++HYGCMVDL
Sbjct: 295 QLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDL 354
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYH 496
RAG + A+ I+ M ++ + V+W +LLGAC+ H DLGE ++K+ +L+P++ +
Sbjct: 355 FCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENY 414
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
VL+SN+YA+ GRW V + RSLMK++ K G+S +E+ VH F++GD+ HP+ EKIY
Sbjct: 415 VLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIY 474
Query: 557 EYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------------- 599
L ++ KL++VG+V V+HD+D+EEKE L +HSE+LA
Sbjct: 475 GMLHQMARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIV 534
Query: 600 -NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH VI+LIS+V +REI+VRD RFH+F++ CSC DYW
Sbjct: 535 KNLRVCRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 170/335 (50%), Gaps = 17/335 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N+F WN++I + + A+ + M ++P TF +K+C L L G++ H
Sbjct: 71 NLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELH 130
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Q G + + + LI +Y+ CG + A +FDE+P+ + SW++M++GY QN
Sbjct: 131 SQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPE--PDSASWSTMVSGYAQNGQ 188
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
A EAL LF+E ++NV D+ +ASV+ C + + + H ++ K
Sbjct: 189 AVEALKLFREM------------QAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDK 236
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G +V +G L+ Y++ G +D + KVF GM E+D W+++IA YA +G +AL +
Sbjct: 237 EGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQL 296
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV-IKMDLEESVIVGTSIIDMY 335
FD M +S + N VT ++VL A +H G++ G I + + + + + ++D++
Sbjct: 297 FDAMKRSKTIP-NCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLF 355
Query: 336 CKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
C+ G V A K M E NV W ++ H
Sbjct: 356 CRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTH 390
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 118/246 (47%), Gaps = 23/246 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ + ++ SW+++++ A+ G +VEAL+ F M+ +++ T + C L
Sbjct: 164 MFDEMPEPDSA-SWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLG 222
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H G DV + +AL+ MYSKCG L +A K+F + + R++ +W++M
Sbjct: 223 ALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAE--RDVTAWSTM 280
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + + +AL LF A + S + + V SVLSACS +G+
Sbjct: 281 IAGYAIHGHGEKALQLFD-----------AMKRSKTI-PNCVTFTSVLSACSH---SGLV 325
Query: 208 EGAHGFV----IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
E H + ++ ++D + R G V + K M IE + V W +++
Sbjct: 326 EKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLG 385
Query: 263 IYAQNG 268
+G
Sbjct: 386 ACKTHG 391
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/659 (35%), Positives = 360/659 (54%), Gaps = 74/659 (11%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ +V SWN +IA L++ G EAL M + + +T+ ++ +C+ L L GKQ
Sbjct: 232 ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQ 291
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H + D +V+SALI++Y+KCG +A+++F+ + R N VSWT ++ G +Q
Sbjct: 292 LHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR--NSVSWTVLIGGSLQY 349
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+ +++ LF + ++ + +D A+A+++S C + H
Sbjct: 350 ECFSKSVELFNQM------------RAELMAIDQFALATLISGCFNRMDLCLGRQLHSLC 397
Query: 215 IKRGFDSEVGVGNTLID-------------------------------AYARGGHVDVSR 243
+K G + + V N+LI AY++ G++ +R
Sbjct: 398 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAR 457
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+ FDGM ++A+TWN+++ Y Q+G + L ++ M+ DV + VT + A +
Sbjct: 458 EFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADI 517
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G +LG I +K L +V V + I MY KCG++ A+K F+ + K+V SW AMI
Sbjct: 518 GANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMI 577
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
GY H ++A F M+ G +P+YI++V+VLS CSH+GLVQEG + + M I
Sbjct: 578 TGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGI 637
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
PG+EH+ CMVDLLGRAG L EA DLI+ M +K VWG+LL AC+IH N +L E+AAK
Sbjct: 638 SPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAK 697
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
+FEL+ + G ++LL+ IY++AG+ +D + R LM+++ + K PG+S +E+ KVH F
Sbjct: 698 HVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFK 757
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
D HPQ I ++EL K+ +GYV + E + HSEKLA
Sbjct: 758 ADDVSHPQVIAIRNKMDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFG 806
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCHTVI+LIS V DRE V+RD RFH+FK G CSCGDYW
Sbjct: 807 IMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 132/554 (23%), Positives = 245/554 (44%), Gaps = 94/554 (16%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTF 76
K + ++ LF++ + + +V SWN++++ + ++ L F SM R P TF
Sbjct: 83 KQGSLSDAEELFDR-MPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTF 141
Query: 77 PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
C +KSC AL Q + F F D V +AL+DM+ +CG + A +LF +I +
Sbjct: 142 CCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIER 201
Query: 137 RI-----------------------------RNIVSWTSMLTGYVQNDNAREALLLFKEF 167
R++VSW M+ Q+ REAL L E
Sbjct: 202 PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 261
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN 227
+ V +DS S L+AC+R+ G + H VI+ + V +
Sbjct: 262 ------------HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
LI+ YA+ G +++VF+ + ++++V+W +I Q ++++++F+QM ++ +
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQM-RAELMA 368
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
+ L+ ++ + L LG+ +H +K +++V S+I +Y KCG + A
Sbjct: 369 IDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFV 428
Query: 348 FNQMKEKNVRSWTAMIAGY---GMHCRAREALD--------------------------- 377
F+ M E+++ SWT+MI Y G +ARE D
Sbjct: 429 FSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGL 488
Query: 378 -LFYKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYG 431
++ M+ + V P+++T+V++ C+ G + G +GH ++ G V
Sbjct: 489 KMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLG---DQIIGH--TVKAGLILNVSVAN 543
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL--- 488
+ + + G++ EA L + + K D V W +++ H +G+ AAK ++
Sbjct: 544 AAITMYSKCGRISEAQKLFDLLNGK-DVVSWNAMITGYSQH---GMGKQAAKTFDDMLSK 599
Query: 489 --EPNNCGYHVLLS 500
+P+ Y +LS
Sbjct: 600 GAKPDYISYVAVLS 613
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 202/446 (45%), Gaps = 57/446 (12%)
Query: 73 RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFD 132
++T A SC AL D +A + +V + +++ Y+K G LSDA +LFD
Sbjct: 42 QNTLLHAYLSCGALSDARRLLRADIK------EPNVITHNIMMNGYAKQGSLSDAEELFD 95
Query: 133 EIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIA 192
+P+R ++ SW ++++GY Q AR L + F+ + S + ++
Sbjct: 96 RMPRR--DVASWNTLMSGYFQ---ARRFLDGLETFV--------SMHRSGDSLPNAFTFC 142
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF------ 246
V+ +C + + G K F + V L+D + R G+VD + ++F
Sbjct: 143 CVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERP 202
Query: 247 -------------------------DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+ M E+D V+WN +IA +Q+G EAL + +M
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH 262
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ V+ ++ T ++ L A A L L GK +H +VI+ + V +++I++Y KCG
Sbjct: 263 RK-GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 321
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
A++ FN ++++N SWT +I G + ++++LF +M + + +++S C
Sbjct: 322 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+ + G L+++ + + ++ L + G L+ A + M + D V
Sbjct: 382 FNRMDLCLG-RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER-DIVS 439
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFE 487
W S++ A N+ I A++ F+
Sbjct: 440 WTSMITAYSQIGNI----IKAREFFD 461
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 140/349 (40%), Gaps = 79/349 (22%)
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA----------------- 232
A+A L +C HG ++ G S V + NTL+ A
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 233 ---------------YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
YA+ G + + ++FD M +D +WN++++ Y Q + L+ F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
M +S D NA T V+ + LG L + K D V T+++DM+ +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185
Query: 338 CGQVDLARKAFNQ-------------------------------MKEKNVRSWTAMIAGY 366
CG VD A + F+Q M E++V SW MIA
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE-- 424
R REAL L +M + GVR + T+ S L+AC A L GW G + + +
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTAC--ARLFSLGW------GKQLHAKVI 297
Query: 425 ---PGVEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
P ++ Y +++L + G KEA + ++ + + V W L+G
Sbjct: 298 RSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR-NSVSWTVLIGG 345
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 84/215 (39%), Gaps = 36/215 (16%)
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK----- 346
L+ L + G L + +H +++ + L +V + +++ Y CG + AR+
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 347 ---------------------------AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
F++M ++V SW +++GY R + L+ F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 380 YKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWLNTM-GHEFNIEPGVEHYGCMVDLL 437
M ++G PN TF V+ +C G + L +F +P VE +VD+
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVDMF 183
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
R G + A L ++ F L G +++
Sbjct: 184 VRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLY 218
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/540 (41%), Positives = 332/540 (61%), Gaps = 32/540 (5%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+S A K+F +I + I N+ W +++ GY + N+ A+ L++E S
Sbjct: 69 MSYAHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSVSAVSLYREM-----------RASGF 116
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V D+ +L A ++ + E H VI+ GF S + V N+L+ YA G V +
Sbjct: 117 VEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY 176
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
KVFD M EKD V WNS+I +A+NG EAL ++ +M +K + T+ ++L A A +
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM-DLKGIKPDGFTIVSLLSACAKI 235
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G L LGK H +IK+ L ++ ++D+Y +CG+V+ A+ F++M +KN SWT++I
Sbjct: 236 GALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLI 295
Query: 364 AGYGMHCRAREALDLFYKM-IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
G ++ +EA++LF M K G+ P ITFV +L ACSH G+V+EG+ + M E+
Sbjct: 296 VGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYK 355
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
IEP +EH+GCMVDLL RAG++K+AY+ I M ++ + V+W +LLGAC +H + DL E+A
Sbjct: 356 IEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELAR 415
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
K+ +LEPN+ G +VLLSN+YA+ RW DV++ R M + K PG SLVE+ +VH F
Sbjct: 416 MKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEF 475
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
L+GDK HPQ++ IY L+E+ +L+ GYV +++V DV++EEKE L HSEK+A
Sbjct: 476 LMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAF 535
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NL+VC DCH I+L+SKV +REIVVRD RFH+FK+G CSC DYW
Sbjct: 536 MLISTPERWPIRVVKNLKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 179/345 (51%), Gaps = 17/345 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSAL 86
+F+K NVF WN++I A G+SV A+ + MR P T+P +K+ +
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKM 134
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D+ G+ H GF ++V ++L+ +Y+ CG+++ A K+FD++P+ +++V+W S
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWNS 192
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ G+ +N EAL L+ E L+ + D I S+LSAC+++ +
Sbjct: 193 VINGFAENGKPEEALALYTEMDLK------------GIKPDGFTIVSLLSACAKIGALTL 240
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H ++IK G + N L+D YAR G V+ ++ +FD M++K++V+W S+I A
Sbjct: 241 GKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 300
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESV 325
NGL EA+++F M + +T +L A +H G+++ G + + +E +
Sbjct: 301 NGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRI 360
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + GQV A + +M + NV W ++ +H
Sbjct: 361 EHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVH 405
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSA 85
TLF++ VDKN+V SW S+I LA G EA+ F +M K L P TF + +CS
Sbjct: 278 TLFDEMVDKNSV-SWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSH 336
Query: 86 LHDLHSGKQAHQQ-AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
+ G + ++ + + + ++D+ ++ G++ A + ++P + N+V W
Sbjct: 337 CGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQ-PNVVIW 395
Query: 145 TSMLTG-YVQNDNAREALLLFKEFLLEESECG 175
++L V D+ L K LE + G
Sbjct: 396 RTLLGACTVHGDSDLAELARMKILQLEPNHSG 427
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/638 (35%), Positives = 372/638 (58%), Gaps = 40/638 (6%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++FN +++ ++ SWN+++A L +EAL+ F R T+ST+ IK C+ L
Sbjct: 257 SVFN-WMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANL 315
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L +Q H GFH V +AL D YSKCGEL+DA +F + RN+VSWT+
Sbjct: 316 KQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIF-SMTTGSRNVVSWTA 374
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+++G +QN + A++LF D V + +++L A +++ +
Sbjct: 375 IISGCIQNGDIPLAVVLFSRM------------REDRVMPNEFTYSAMLKA----SLSIL 418
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H VIK + VG L+ +Y++ G + + +F + +KD V W+++++ +AQ
Sbjct: 419 PPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQ 478
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA--HLGVLRLGKCIHDQVIKMDLEES 324
G A +F++M +K N T+S+V+ A A GV + G+ H IK ++
Sbjct: 479 AGDCEGATYLFNKMAIQ-GIKPNEFTISSVIDACACPSAGVDQ-GRQFHAISIKYRYHDA 536
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+ V ++++ MY + G +D A+ F + ++++ SW +MI+GY H + +A++ F +M
Sbjct: 537 ICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEA 596
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
+G++ + +TF++V+ C+H GLV EG + ++M + I P +EHY CMVDL RAGKL
Sbjct: 597 SGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLD 656
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
E LI M A +VW +LLGACR+HKNV+LG+ +A KL LEP++ +VLLSNIYA
Sbjct: 657 ETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYA 716
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
AG+W++ + R LM R++ K G S ++++ KVH+F+ DK HP ++IY+ L+ +
Sbjct: 717 AAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIIT 776
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
+L++ GY + + V+HD+ +++KE L HSE+LA NLRVCGD
Sbjct: 777 RLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGD 836
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH V++++S + DREI++RD RFH+F G CSCGD+W
Sbjct: 837 CHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 206/435 (47%), Gaps = 21/435 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K NV +W S++ A E + F MR + P TF + + ++ L G
Sbjct: 161 MPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLG 220
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ H Q+ FG VFV ++L++MY+KCG + DA+ +F+ + R++VSW +++ G
Sbjct: 221 QRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWM--ETRDMVSWNTLMAGLQ 278
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N+ EAL LF E + G ++++ A+V+ C+ + + H
Sbjct: 279 LNECELEALQLFHE---SRATMGKMTQST---------YATVIKLCANLKQLALARQLHS 326
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQNGLAA 271
V+K GF V L DAY++ G + + +F ++ V+W +II+ QNG
Sbjct: 327 CVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIP 386
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
A+ +F +M + V N T SA+L A + L IH QVIK + + VGT++
Sbjct: 387 LAVVLFSRM-REDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTAL 441
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ Y K G + A F +++K+V +W+AM++ + A LF KM G++PN
Sbjct: 442 LASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNE 501
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
T SV+ AC+ + + + ++ + +V + R G + A + E
Sbjct: 502 FTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFE 561
Query: 452 GMKVKADFVVWGSLL 466
+ D V W S++
Sbjct: 562 -RQTDRDLVSWNSMI 575
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 208/436 (47%), Gaps = 41/436 (9%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N V+ D AR G +E L FS R+ + +T C +K+C ++ D G+Q H
Sbjct: 68 NRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVK 127
Query: 102 FGFHR-DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
G R +V ++L+DMY KCG + + ++F+ +P+ +N+V+WTS+LTG E
Sbjct: 128 CGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPK--KNVVTWTSLLTGCAHAQMHSEV 185
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
+ LF ++ ++ + ASVLSA + + + H +K G
Sbjct: 186 MALFFRM------------RAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCR 233
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
S V V N+L++ YA+ G V+ ++ VF+ M +D V+WN+++A N EAL +F +
Sbjct: 234 SSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHE- 292
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
++T K T + V+ A+L L L + +H V+K + V T++ D Y KCG+
Sbjct: 293 SRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGE 352
Query: 341 VDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF----- 394
+ A F+ +NV SWTA+I+G + A+ LF +M + V PN T+
Sbjct: 353 LADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLK 412
Query: 395 --VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
+S+L HA +++ + + +G LL K D +
Sbjct: 413 ASLSILPPQIHAQVIKTNYQHIPFVG---------------TALLASYSKFGSTEDALSI 457
Query: 453 MKV--KADFVVWGSLL 466
K+ + D V W ++L
Sbjct: 458 FKMIEQKDVVAWSAML 473
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 181/377 (48%), Gaps = 20/377 (5%)
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
AR DEIP+R + + V D AR ++L + GG V V
Sbjct: 51 ARYPLDEIPRRDAAVGA------NRVLFDYARRGMVLEVLDQFSVARRGG-------VLV 97
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD-SEVGVGNTLIDAYARGGHVDVSRKV 245
DS ++ VL AC V + E H +K G D EV G +L+D Y + G V +V
Sbjct: 98 DSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEV 157
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F+GM +K+ VTW S++ A + +E + +F +M ++ + N T ++VL A+A G
Sbjct: 158 FEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRM-RAEGIWPNPFTFASVLSAVASQGA 216
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L LG+ +H Q +K SV V S+++MY KCG V+ A+ FN M+ +++ SW ++AG
Sbjct: 217 LDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAG 276
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN-TMGHEFNIE 424
++ EAL LF++ + T+ +V+ C++ + + + H F++
Sbjct: 277 LQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLT 336
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
V + D + G+L +A ++ + V W +++ C + ++ L + +
Sbjct: 337 GNV--MTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSR 394
Query: 485 LFE--LEPNNCGYHVLL 499
+ E + PN Y +L
Sbjct: 395 MREDRVMPNEFTYSAML 411
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
S++VS + + +F + D++ V SWNS+I+ A+ G S++A+ F M +
Sbjct: 541 SALVSMYSRKGNIDSAQIVFERQTDRDLV-SWNSMISGYAQHGYSMKAIETFRQMEASGI 599
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVS------SALIDMYSKCGE 123
TF I C+ H+G Q + RD ++ + ++D+YS+ G+
Sbjct: 600 QMDGVTFLAVIMGCT-----HNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGK 654
Query: 124 LSDARKLFDEIPQRIRNIVSWTSML 148
L + L ++P +V W ++L
Sbjct: 655 LDETMSLIRDMPFPAGAMV-WRTLL 678
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/652 (35%), Positives = 356/652 (54%), Gaps = 34/652 (5%)
Query: 11 SVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT 70
S+V K T + +F K + +V +W+++I L + G EA F MR+
Sbjct: 91 SLVDMYSKCGTVYDALKVFTK-IRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGAR 149
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P + T + + + + DL G+ H +GF D VS+ LI MY K + D K+
Sbjct: 150 PNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKV 209
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F+ + ++VSW ++L+G+ + +F + LLE + N+F
Sbjct: 210 FEAMTNP--DLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFK--------PNMFT---- 255
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
SVL +CS + + H +IK D + VG L+D YA+ ++ + FD ++
Sbjct: 256 FISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLV 315
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+D +W II+ YAQ A +A+ F QM + +K N TL++ L +H+ L G+
Sbjct: 316 NRDIFSWTVIISGYAQTDQAEKAVKYFRQMQRE-GIKPNEYTLASCLSGCSHMATLENGR 374
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
+H +K + VG++++D+Y KCG ++ A F + +++ SW +I+GY H
Sbjct: 375 QLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHG 434
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
+ +AL+ F M+ G+ P+ TF+ VLSACS GLV+EG ++M + I P +EHY
Sbjct: 435 QGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHY 494
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
CMVD+LGRAGK E IE M + ++W ++LGAC++H NVD GE AAKKLFE+EP
Sbjct: 495 ACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEP 554
Query: 491 NNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHP 550
++LLSNI+A+ GRW+DV R+LM +R + K PG S VE+ G+VH FL D HP
Sbjct: 555 MMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHP 614
Query: 551 QHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------- 599
+ +IY L++L L +GYV V+H+V +EK L HSE+LA
Sbjct: 615 KIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAV 674
Query: 600 -------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH ++LIS + ++EIVVRD +RFH+FK G CSC D W
Sbjct: 675 KPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSCQDRW 726
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 228/451 (50%), Gaps = 30/451 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF +KN V SWN+++ A+ GD + L+ F M++ ++ T +K C+
Sbjct: 7 LFFGMPEKNGV-SWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTG 65
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H A G D F+ +L+DMYSKCG + DA K+F +I R ++V+W++M
Sbjct: 66 SLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKI--RNPDVVAWSAM 123
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+TG Q + +EA LF L+ GA N ++S++S + +
Sbjct: 124 ITGLDQQGHGQEAAELFH--LMRRK---GARPN-------QFTLSSLVSTATNMGDLRYG 171
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG + K GF+S+ V N LI Y + V+ KVF+ M D V+WN++++ + +
Sbjct: 172 QSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDS 231
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+F QM+ K N T +VL + + L GK +H +IK ++ V
Sbjct: 232 QTCGRGPRIFYQMLLE-GFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFV 290
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
GT+++DMY K ++ A AF+++ +++ SWT +I+GY +A +A+ F +M + G+
Sbjct: 291 GTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGI 350
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG------CMVDLLGRAG 441
+PN T S LS CSH ++ G H ++ G H+G +VDL G+ G
Sbjct: 351 KPNEYTLASCLSGCSHMATLENGRQL-----HAVAVKAG--HFGDIFVGSALVDLYGKCG 403
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++ A + +G+ + D V W +++ H
Sbjct: 404 CMEHAEAIFKGL-ISRDIVSWNTIISGYSQH 433
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 101/172 (58%), Gaps = 1/172 (0%)
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
++++ ++F GM EK+ V+WN+++ YAQ G + L +F +M K + K + TLS VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKM-KECETKFSKFTLSTVLK 59
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
A+ G LR GK +H ++ E +G S++DMY KCG V A K F +++ +V +
Sbjct: 60 GCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVA 119
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
W+AMI G +EA +LF+ M + G RPN T S++S ++ G ++ G
Sbjct: 120 WSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYG 171
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/550 (39%), Positives = 331/550 (60%), Gaps = 75/550 (13%)
Query: 117 MYSKC---GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA-REALLLFKEFLLEES 172
MY+KC G + D+RK+F+++P+ N++SWT+++T YVQ+ +EA+ LF + +
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEH--NVMSWTAIITAYVQSGECDKEAIELFCKMISASV 58
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
C VGN+LI
Sbjct: 59 NC--------------------------------------------------VGNSLISM 68
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
YAR G ++ +RK FD + EK+ V++N+I+ YA+N + EA +F++ + T + +A T
Sbjct: 69 YARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNE-IADTGIGISAFT 127
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
+++L A +G + G+ IH +++K + + + ++I MY +CG ++ A + FN+M+
Sbjct: 128 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 187
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
++NV SWT+MI G+ H A AL++F+KM++ G +PN IT+V+VLSACSH G++ EG
Sbjct: 188 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 247
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
N+M E I P +EHY CMVDLLGR+G L EA + I M + AD +VW +LLGACR+H
Sbjct: 248 HFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVH 307
Query: 473 KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSL 532
N +LG AA+ + E EP++ ++LLSN++A+AG+W+DV + R MK R L K G S
Sbjct: 308 GNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSW 367
Query: 533 VELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLR 592
+E+ +VH F VG+ HPQ +IY+ L++L K++E+GY+ D V+HD+++E+KE L
Sbjct: 368 IEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLF 427
Query: 593 IHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFK 634
HSEK+A NLRVCGDCHT I+ IS REIVVRDS RFH+ K
Sbjct: 428 QHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIK 487
Query: 635 DGLCSCGDYW 644
+G+CSC DYW
Sbjct: 488 NGVCSCNDYW 497
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 114/232 (49%), Gaps = 20/232 (8%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ N+ S+N+++ A+ S EA F+ + + + TF + +++ + G+Q
Sbjct: 87 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 146
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H + G+ + + +ALI MYS+CG + A ++F+E+ RN++SWTSM+TG+ ++
Sbjct: 147 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMED--RNVISWTSMITGFAKH 204
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF- 213
A AL +F + L E G + + +VLSACS V + ++EG F
Sbjct: 205 GFATRALEMFHKML----ETGTKP--------NEITYVAVLSACSHVGM--ISEGQKHFN 250
Query: 214 --VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
+ G + ++D R G + + + + M + DA+ W +++
Sbjct: 251 SMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 302
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/606 (39%), Positives = 339/606 (55%), Gaps = 73/606 (12%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H G H ++ L Y+ G L + LF P N+ WT ++ +
Sbjct: 41 QIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNP--NVFLWTHIINAHAH 98
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
D AL + + L + N F ++S+L AC+ V H
Sbjct: 99 FDLFHHALSYYSQMLTHPIQ--------PNAFT----LSSLLKACTLHPARAV----HSH 142
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE---------------------- 251
IK G S + V L+DAYARGG V ++K+FD M E
Sbjct: 143 AIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEA 202
Query: 252 ---------KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST------DVKCNAVTLSAV 296
KD V WN +I YAQ+G EAL F +M+ V+ N +T+ AV
Sbjct: 203 RVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAV 262
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L + +G L GK +H V ++ +V VGT+++DMYCKCG ++ ARK F+ M+ K+V
Sbjct: 263 LSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDV 322
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+W +MI GYG+H + EAL LF++M GV+P+ ITFV+VL+AC+HAGLV +GW ++
Sbjct: 323 VAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDS 382
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M + +EP VEHYGCMV+LLGRAG+++EAYDL+ M+V+ D V+WG+LL ACRIH NV
Sbjct: 383 MKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVS 442
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
LGE A+ L + G +VLLSN+YA A W V + RS+MK + K PG S +E++
Sbjct: 443 LGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVK 502
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
+VH F+ GD+ HP+ + IY LE++N L+E Y +V+HD+ ++EKE +L +HSE
Sbjct: 503 NRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLEVHSE 562
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLRVC DCH V++++SK+ R+I++RD RFH+F++G C
Sbjct: 563 KLALAFGLISTSPGAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSC 622
Query: 639 SCGDYW 644
SC DYW
Sbjct: 623 SCRDYW 628
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 181/402 (45%), Gaps = 67/402 (16%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
TLF++ NVF W +I A AL +S M + P T +K+C+
Sbjct: 75 VTLFHR-TPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT- 132
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
LH + H A FG ++VS+ L+D Y++ G+++ A+KLFD +P+R ++VS+T
Sbjct: 133 ---LHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPER--SLVSYT 187
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESEC------GGASENSDN---------------- 183
+MLT Y ++ EA +LF+ +++ C G A N
Sbjct: 188 AMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGN 247
Query: 184 ----VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
V + + + +VLS+C +V + H +V G V VG L+D Y + G +
Sbjct: 248 GNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSL 307
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+ +RKVFD M KD V WNS+I Y +G + EAL +F +M VK + +T AVL A
Sbjct: 308 EDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMC-CIGVKPSDITFVAVLTA 366
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
AH G++ G + D S+ D Y E V +
Sbjct: 367 CAHAGLVSKGWEVFD---------------SMKDGYG---------------MEPKVEHY 396
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
M+ G R +EA DL M V P+ + + ++L AC
Sbjct: 397 GCMVNLLGRAGRMQEAYDLVRSM---EVEPDPVLWGTLLWAC 435
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 245/643 (38%), Positives = 365/643 (56%), Gaps = 44/643 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + + ++ S+N++I A GD++ AL F MR++ L TF I +C
Sbjct: 96 LFDQ-IPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCN-- 152
Query: 88 DLHSG--KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
H G +Q H AF GF V V ++L+ YSK G L +A +F+ + + +R+ VSW
Sbjct: 153 --HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWN 210
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
SM+ Y Q+ +AL L+++ + E +D +ASVL+ S V
Sbjct: 211 SMIVAYGQHKRGLKALALYRDMVHRGFE------------IDMFTLASVLTTFSCVEDLS 258
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYAR-GGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
H IK GF+ VG+ LID YA+ G + SRKVF+ + D V WN++I+ Y
Sbjct: 259 GGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGY 318
Query: 265 AQNG-LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
+QN L+ EAL+ F QM ++ + + A+ A ++L GK H +K ++
Sbjct: 319 SQNKELSVEALECFRQMQRAGYWPDDCSFVCAIS-ACSNLSSPSQGKQFHALAMKSEIPS 377
Query: 324 SVI-VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ I V +++ MY KCG + ARK F +M + N + ++IAGY H E+L+LF +M
Sbjct: 378 NQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQM 437
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
+ A + P IT VS+LSAC+H G V+EG + N M F IEP EHY CM+DLLGRAGK
Sbjct: 438 LAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGK 497
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
L EA LI+ M W +LLGACR + N++L E AA + +LEP N +++L+++
Sbjct: 498 LSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASM 557
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
Y+ A +WE+ R R LM++R + K PG S +EL +VH F+ D HP+ ++I+ YL+E+
Sbjct: 558 YSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEM 617
Query: 563 NVKLQEVGYVTDMT-SVIHD--VDQEEKEMTLRIHSEKLA------------------NL 601
VK++ GYV D+ + + D ++EKE+ L HSEKLA NL
Sbjct: 618 FVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEPLLVVKNL 677
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
R+CGDCH I+ +S + R+I VRD+ RFH F+DG CSCGDYW
Sbjct: 678 RICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 229/493 (46%), Gaps = 68/493 (13%)
Query: 72 TRSTFPCAIKSCSALHDLHSGKQAH-------------------------------QQAF 100
T +F +KSC A DL +GK H AF
Sbjct: 7 TLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAF 66
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
+VF +ALI Y+K + A LFD+IPQ ++VS+ +++ Y + A
Sbjct: 67 NQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQ--PDLVSFNTLINAYADRGDTLSA 124
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
L LF E E G + +D + V++AC G+ H GFD
Sbjct: 125 LSLFGEM----REMG--------LVMDGFTFSGVITACCNHV--GLIRQLHSLAFSSGFD 170
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIE--KDAVTWNSIIAIYAQNGLAAEALDVFD 278
S V V N+L+ Y++ G ++ + VF+GM E +D V+WNS+I Y Q+ +AL ++
Sbjct: 171 SYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYR 230
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
MV + + TL++VL + + L G H + IK ++ VG+ +IDMY KC
Sbjct: 231 DMVHR-GFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKC 289
Query: 339 GQ-VDLARKAFNQMKEKNVRSWTAMIAGYGMHCR-AREALDLFYKMIKAGVRPNYITFVS 396
G + +RK F ++ ++ W MI+GY + + EAL+ F +M +AG P+ +FV
Sbjct: 290 GAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVC 349
Query: 397 VLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
+SACS+ +G +H L + + V + +V + + G L++A L + M
Sbjct: 350 AISACSNLSSPSQGKQFHALAMKSEIPSNQISVNN--ALVTMYSKCGNLQDARKLFQRMP 407
Query: 455 VKADFVVWGSLLGACRIH----KNVDLGE--IAAKKLFELEPNNCGYHVLLSNIYANAGR 508
+ + V S++ H ++++L E +AA + P + +LS A+ GR
Sbjct: 408 -QHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAA----SIAPTSITLVSILSAC-AHTGR 461
Query: 509 WEDVERTRSLMKN 521
E+ ++ ++MK+
Sbjct: 462 VEEGKKYFNMMKD 474
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 246/656 (37%), Positives = 374/656 (57%), Gaps = 58/656 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRK----LSLTPTRSTFPCAIKSCSALHD-LHS 91
N SWNS+I+ +R GD+V A FSSM+K S P A S L +
Sbjct: 268 NSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPND-----AFSEFSVLEEGRRK 322
Query: 92 GKQAHQQAFIFGFHRD-VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G++ H G + + V + + L++MY+K G ++DA +F+ + ++ + VSW S+++G
Sbjct: 323 GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEK--DSVSWNSLISG 380
Query: 151 YVQNDNAREALLLFKEFLLEE-------SECGGASENSDNVF---------------VDS 188
QN+ + +A +F L+ E S G S++ +V +
Sbjct: 381 LDQNECSEDAAEMFS--LMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSR 438
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
V ++LSA S ++++ V+ H V+K + +GN L+ Y + G ++ K+F
Sbjct: 439 VTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFAR 498
Query: 249 MIE-KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
M E +D V+WNS+I+ Y N L +A+D+ M++ + ++ T + +L A A + L
Sbjct: 499 MSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQ-RLDSFTFATILSACASVATLE 557
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
G +H I+ LE V+VG++++DMY KCG++D A + F M +NV SW +MI+GY
Sbjct: 558 RGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYA 617
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
H +AL LF +M+ G P+++TFV VLSACSH G V+EG+ +M + + P V
Sbjct: 618 RHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRV 677
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA-CRIH-KNVDLGEIAAKKL 485
EH+ CMVDLLGRAGKL E D I M +K + ++W ++LGA CR + +N +LG AA+ L
Sbjct: 678 EHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEML 737
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
ELEP N +VLL+N+YA+ +WEDV + R+ MK + K G S V ++ VH F+ G
Sbjct: 738 LELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAG 797
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
DK HP+ + IY+ L ELN K+++ GY+ + D++ E KE L HSEK+A
Sbjct: 798 DKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLT 857
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH+ ISK+V R+IV+RDS RFH+F+DG CSCGDYW
Sbjct: 858 RQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 210/474 (44%), Gaps = 74/474 (15%)
Query: 53 DSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS 112
D V+ + +S +L + TF I ++ H Q+ +GF ++F+S+
Sbjct: 79 DLVDHYKTSTSHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSN 138
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
LI++Y + G+L A+KLFDE+ RN+V+W +++GY QN EA F++ +
Sbjct: 139 TLINIYVRIGDLGSAQKLFDEMSN--RNLVTWACLISGYTQNGKPDEACARFRDMV---- 192
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLI 230
+ A S L AC +G G HG + K + S+V V N LI
Sbjct: 193 --------RAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLI 244
Query: 231 DAYARGGHVDV---SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST--- 284
Y G +D +R VFDG+ +++++WNSII++Y++ G A A D+F M K
Sbjct: 245 SMY--GSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGF 302
Query: 285 DVKCNAVTLSAVLLAIAHLGVL----RLGKCIHDQVIKMDLEES-VIVGTSIIDMYCKCG 339
K N A + VL R G+ +H VI+ L ++ V +G +++MY K G
Sbjct: 303 SFKPND--------AFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSG 354
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMH------------------------------ 369
+ A F M EK+ SW ++I+G +
Sbjct: 355 AIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSD 414
Query: 370 --CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+A+ F +M++ G + +TF+++LSA S L E H ++ + ++ +
Sbjct: 415 SEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSL-HEVSHQIHALVLKYCLSDDT 473
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC----RIHKNVDL 477
++ G+ G++ E + M D V W S++ +HK +DL
Sbjct: 474 AIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDL 527
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 134/293 (45%), Gaps = 37/293 (12%)
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
IK GF + + NTLI+ Y R G + ++K+FD M ++ VTW +I+ Y QNG EA
Sbjct: 126 IKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEAC 185
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV--LRLGKCIHDQVIKMDLEESVIVGTSII 332
F MV++ + N + L A G +LG IH + K V+V +I
Sbjct: 186 ARFRDMVRAGFIP-NHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLI 244
Query: 333 DMYCKC-GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV---- 387
MY C + AR F+ + +N SW ++I+ Y A A DLF M K G+
Sbjct: 245 SMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSF 304
Query: 388 RPNYITFVSVLSACSHAGLVQEG--------WHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
+PN A S +++EG H + T ++ + G +V++ +
Sbjct: 305 KPN--------DAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIG----NGLVNMYAK 352
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA--AKKLFELEP 490
+G + +A + E M V+ D V W SL+ +D E + A ++F L P
Sbjct: 353 SGAIADACSVFELM-VEKDSVSWNSLISG------LDQNECSEDAAEMFSLMP 398
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 29 FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD 88
F + + NV+SWNS+I+ AR G +AL+ F+ M P TF + +CS +
Sbjct: 597 FFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGF 656
Query: 89 LHSG-KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G + + ++ V S ++D+ + G+L + + +P + N++ W ++
Sbjct: 657 VEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMK-PNVLIWRTV 715
Query: 148 LTGYVQNDNAREALLLFK--EFLLE 170
L G N R L + E LLE
Sbjct: 716 L-GACCRANGRNTELGRRAAEMLLE 739
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/602 (39%), Positives = 347/602 (57%), Gaps = 36/602 (5%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHS-GKQAHQQAFIFGF-HRDVFVSSALIDMYSKC 121
M +L L P TFP A K+ ++ + G Q H A FG+ D FVS A +DMY K
Sbjct: 1 MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G L AR LF E+P R N+V+W +++T V + E + E E GG
Sbjct: 61 GRLKLARHLFGEMPNR--NVVAWNAVMTNAVLDGRPLETI----EAYFGLREAGG----- 109
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
+ V+ + +AC+ + E HGFV+K GF+ +V V N+++D Y +
Sbjct: 110 ---LPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGK 166
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R VFDGM +++V+W S++A YAQNG EA + +S + + + SA+
Sbjct: 167 ARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAG 226
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
LG L LG+ +H ++ ++ ++ V ++++DMY KCG V+ A + F + ++N+ +W A
Sbjct: 227 LLG-LHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNA 285
Query: 362 MIAGYGMHCRAREALDLFYKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
MI GY A+ AL +F MI++G PNYIT V+V+++CS GL ++G+ TM
Sbjct: 286 MIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRER 345
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
F IEP EHY C+VDLLGRAG ++AY++I+GM ++ VWG+LLGAC++H +LG I
Sbjct: 346 FGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRI 405
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
AA+KLFEL+P + G HVLLSN++A+AGRW + R MKN + K PG S V + VH
Sbjct: 406 AAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVH 465
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA- 599
F D +H + +I L +L ++Q GY+ D ++D+++EEKE + HSEKLA
Sbjct: 466 VFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLAL 525
Query: 600 -----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
NLR+C DCH + IS +V REI+VRD+ RFH+FK CSCGD
Sbjct: 526 AFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGD 585
Query: 643 YW 644
YW
Sbjct: 586 YW 587
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 163/344 (47%), Gaps = 17/344 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF + ++N V +WN+V+ + G +E + A+ +R+ P + +C+
Sbjct: 69 LFGEMPNRN-VVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAM 127
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+Q H GF DV V ++++D Y KC AR +FD + +RN VSW SM
Sbjct: 128 YLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGM--GVRNSVSWCSM 185
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y QN EA F +L GA + + ++S L+ C+ + +
Sbjct: 186 VAAYAQNGAEEEA---FAAYL-------GARRSGEE--PTDFMVSSALTTCAGLLGLHLG 233
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H ++ D+ + V + L+D Y + G V+ + ++F +++ VTWN++I YA
Sbjct: 234 RALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHI 293
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESVI 326
G A AL VFD M++S + N +TL V+ + + G+ + G + + + + +E
Sbjct: 294 GDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTE 353
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMH 369
++D+ + G + A + M + ++ W A++ MH
Sbjct: 354 HYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMH 397
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 138/284 (48%), Gaps = 28/284 (9%)
Query: 7 SSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK 66
S ++S+V K +F+ +N+V SW S++A A+ G EA A+ R+
Sbjct: 149 SVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV-SWCSMVAAYAQNGAEEEAFAAYLGARR 207
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
PT A+ +C+ L LH G+ H A ++FV+SAL+DMY KCG + D
Sbjct: 208 SGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVED 267
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
A ++F E PQ RN+V+W +M+ GY +A+ ALL+F + + + E + N
Sbjct: 268 AEQIFYETPQ--RNLVTWNAMIGGYAHIGDAQNALLVFDDMIR-------SGETAPNY-- 316
Query: 187 DSVAIASVLSACSRVTVNGVT-EGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVS 242
+ + +V+++CSR G+T +G F R G + ++D R G + +
Sbjct: 317 --ITLVNVITSCSR---GGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQA 371
Query: 243 RKVFDGMIEKDAVT-WNSIIAIYAQNG------LAAEALDVFDQ 279
+V GM + +++ W +++ +G +AAE L D
Sbjct: 372 YEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDP 415
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/629 (35%), Positives = 350/629 (55%), Gaps = 34/629 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V S+N ++ G+ +E ++ F +M P F + +C+ + G Q H
Sbjct: 85 SVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCH 144
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN---IVSWTSMLTGYVQ 153
F FG FV S+L+ MYSKC + A ++ + I N + S+L V+
Sbjct: 145 GFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVE 204
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+ EA+ + + + V DSV SV+ C ++ G+ H
Sbjct: 205 SGRLGEAVEVLGRMV------------DEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQ 252
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
++K G +V VG+ L+D + + G V +RKVFDG+ ++ V W S++ Y QNG E
Sbjct: 253 LLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEET 312
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L++ M + + N T + +L A A + LR G +H +V K+ ++ VIVG ++I+
Sbjct: 313 LNLLSCMDREGTMS-NEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALIN 371
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY KCG +D + F M+ +++ +W AMI GY H ++AL LF M+ AG PN++T
Sbjct: 372 MYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVT 431
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
FV VLSAC+H LV EG+++LN + F +EPG+EHY C+V +L RAG L+EA + +
Sbjct: 432 FVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTT 491
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
+VK D V W LL AC IH+N +LG A+ + +++P + G + LLSN+YA A W+ V
Sbjct: 492 QVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVT 551
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
R +M+ R + K PG S +E+R VH F HP+ +IY ++ L ++++GYV
Sbjct: 552 MIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVP 611
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
++ +V+HDV+ E+KE L HSEKLA NLR+C DCHT ++LIS
Sbjct: 612 NIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKLIS 671
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
KV +R I+VRD+ RFH+F+DG C+C D+W
Sbjct: 672 KVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 165/338 (48%), Gaps = 17/338 (5%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
+ N+ F +NSV+ L G EA+ M + T+ + C + DL G
Sbjct: 188 NDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGL 247
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H Q G DVFV S L+DM+ KCG++ ARK+FD + RN+V WTS++T Y+Q
Sbjct: 248 QVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQN--RNVVVWTSLMTAYLQ 305
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N E L L + + + + A +L+A + + + H
Sbjct: 306 NGEFEETLNLL------------SCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHAR 353
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V K G + V VGN LI+ Y++ G +D S VF M +D +TWN++I Y+Q+GL +A
Sbjct: 354 VEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQA 413
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSII 332
L +F M+ + + N VT VL A AHL ++ G +Q++K +E + T ++
Sbjct: 414 LLLFQDMLSAGECP-NHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVV 472
Query: 333 DMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMH 369
+ C+ G ++ A + K +V +W ++ +H
Sbjct: 473 AVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIH 510
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 211/427 (49%), Gaps = 40/427 (9%)
Query: 88 DLHSGKQAHQQAFI---FGFHR-----DVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+L+ GK H Q I H ++ ++LI++Y KC +L AR LFDE+ +R
Sbjct: 27 NLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS--LR 84
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++VS+ ++ GY+ + E + LFK + +S N +V +VLSAC+
Sbjct: 85 SVVSYNVLMGGYLHSGEHLEVVKLFKNMV--------SSLYQPNEYV----FTTVLSACA 132
Query: 200 RVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD---GMI--EK 252
V EG HGF+ K G V ++L+ Y++ HVD++ +V + G I +
Sbjct: 133 H--SGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDN 190
Query: 253 DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI 312
DA +NS++ ++G EA++V +MV V ++VT +V+ + L LG +
Sbjct: 191 DAFCYNSVLNALVESGRLGEAVEVLGRMVDE-GVVWDSVTYVSVMGLCGQIRDLGLGLQV 249
Query: 313 HDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
H Q++K L V VG+ ++DM+ KCG V ARK F+ ++ +NV WT+++ Y +
Sbjct: 250 HAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEF 309
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC 432
E L+L M + G N TF +L+A + ++ G L+ + I+ V
Sbjct: 310 EETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHG-DLLHARVEKLGIKNRVIVGNA 368
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--LEP 490
++++ + G + +YD+ M+ + D + W +++ H LG+ A LF+ L
Sbjct: 369 LINMYSKCGCIDSSYDVFFDMRNR-DIITWNAMICGYSQH---GLGK-QALLLFQDMLSA 423
Query: 491 NNCGYHV 497
C HV
Sbjct: 424 GECPNHV 430
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 140/327 (42%), Gaps = 53/327 (16%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ NV W S++ + G+ E L S M + TF + + + + L G
Sbjct: 288 LQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHG 347
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H + G V V +ALI+MYSKCG + + +F ++ R R+I++W +M+ GY
Sbjct: 348 DLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDM--RNRDIITWNAMICGYS 405
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+ ++ALLLF++ +L EC + V VLSAC+ + + V EG +
Sbjct: 406 QHGLGKQALLLFQD-MLSAGECP-----------NHVTFVGVLSACAHLAL--VNEGFYY 451
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
N L+ + +E + ++A+ + G+ E
Sbjct: 452 L-------------NQLMKHFK---------------VEPGLEHYTCVVAVLCRAGMLEE 483
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A + +++T VK + V +L A LG I + +++MD + +GT +
Sbjct: 484 A----ENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRD---MGTYTL 536
Query: 333 --DMYCKCGQVDLARKAFNQMKEKNVR 357
+MY K D M+E+NV+
Sbjct: 537 LSNMYAKARSWDSVTMIRKMMRERNVK 563
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/507 (42%), Positives = 310/507 (61%), Gaps = 50/507 (9%)
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
+ +++V+ AC+ + + AH ++IK GF+S+V V L+ YAR G ++ + VF
Sbjct: 9 NQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVF 68
Query: 247 DGMIEK-------------------------------DAVTWNSIIAIYAQNGLAAEALD 275
D M E+ D V+W ++IA YAQNG E+L+
Sbjct: 69 DKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLN 128
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
VF+QM K T +K + + +VL A A L L LG+ H V++ ++VG++++DMY
Sbjct: 129 VFNQMRK-TGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMY 187
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
K G ++ A + F++M ++N SW ++I G H R +A+ LF +M++AG++PN I+FV
Sbjct: 188 AKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFV 247
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
VLSACSH GLV EG + N M + I P V HY CM+DLLGRAG L EA + I GM V
Sbjct: 248 GVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPV 307
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
+ D VWG+LLGACRIH N +L + A+ L +E G +VLLSNIYA AG+W+D +
Sbjct: 308 EPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKV 367
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
R LMK+R + K PG+S +E++ +HAF+ G+ HPQ ++I+E+LE L+ K++ GYV +
Sbjct: 368 RKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPNK 427
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
V+ DV+ +EKE++L HSEKLA NLRVCGDCHTVI+ IS
Sbjct: 428 NFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTVIKFISLN 487
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
R+IVVRD+ RFH+FKDG CSCGDYW
Sbjct: 488 FTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 173/322 (53%), Gaps = 24/322 (7%)
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
+ P + T +K+C+++ L GKQAH GF DV V +AL+ MY++CG L DA
Sbjct: 6 VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF----------LLEESECGGAS 178
+FD++ +R + +W +M+TG+ QN + ++AL LF E ++ G
Sbjct: 66 HVFDKMSER--STRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123
Query: 179 ENSDNVF---------VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTL 229
+ S NVF D + SVLSAC+ + + H +V++ GF ++ VG+ L
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSAL 183
Query: 230 IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCN 289
+D YA+ G ++ + +VFD M +++ V+WNSII AQ+G +A+ +F+QM+++ +K N
Sbjct: 184 VDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQA-GIKPN 242
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
++ VL A +H G++ G+ + + + + V T +ID+ + G +D A
Sbjct: 243 EISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFI 302
Query: 349 NQMK-EKNVRSWTAMIAGYGMH 369
N M E +V W A++ +H
Sbjct: 303 NGMPVEPDVSVWGALLGACRIH 324
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 171/399 (42%), Gaps = 79/399 (19%)
Query: 16 VDKHSTNTNLTTLFNKYVD--KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTR 73
+ H+ N ++ + + + +V SW +VIA A+ G E+L F+ MRK + R
Sbjct: 83 ITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDR 142
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDE 133
+ +C+ L L G+Q H GF D+ V SAL+DMY+K G + DA ++FD+
Sbjct: 143 FIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDK 202
Query: 134 IPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
+PQ RN VSW S++TG Q+ +A+LLF++ L + + ++
Sbjct: 203 MPQ--RNEVSWNSIITGCAQHGRGNDAVLLFEQML------------QAGIKPNEISFVG 248
Query: 194 VLSACSRVTVNGVTEGAHGFVI---KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM- 249
VLSACS + V EG F + G +V +ID R G +D + +GM
Sbjct: 249 VLSACSHTGL--VNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMP 306
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+E D W A+L A G L
Sbjct: 307 VEPDVSVW------------------------------------GALLGACRIHGNTELA 330
Query: 310 KCIHDQVIKMDLEESVIVGTSII--DMYCKCGQVDLARKAFNQMKEKNVR-----SWT-- 360
K I + ++ M+++ I G ++ ++Y GQ D A K MK++ V SW
Sbjct: 331 KRIAEHLLGMEVQ---IAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEV 387
Query: 361 -----AMIAGYGMHCRAREALD----LFYKMIKAGVRPN 390
A +AG H + +E + L KM AG PN
Sbjct: 388 KTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPN 426
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 121/252 (48%), Gaps = 43/252 (17%)
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
VK N TLS V+ A A + L GK H+ +IKM E V+V T+++ MY +CG ++ A
Sbjct: 6 VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65
Query: 346 KAFNQMKEKNVR-------------------------------SWTAMIAGYGMHCRARE 374
F++M E++ R SWTA+IAGY + E
Sbjct: 66 HVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDE 125
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHY 430
+L++F +M K G++ + SVLSAC+ ++ G + H + ++ G +
Sbjct: 126 SLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQF-----HAYVVQSGFALDIVVG 180
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--L 488
+VD+ ++G +++A + + M + + V W S++ C H + + +++ + +
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNE-VSWNSIITGCAQHGRGNDAVLLFEQMLQAGI 239
Query: 489 EPNNCGYHVLLS 500
+PN + +LS
Sbjct: 240 KPNEISFVGVLS 251
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/629 (38%), Positives = 358/629 (56%), Gaps = 36/629 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS-GKQA 95
V S+ + I+ A+ ++AL AF++M +L L P TFP A K+ ++ + G Q
Sbjct: 83 TVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQL 142
Query: 96 HQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H A FG+ D FVS A +DMY K G L+ AR+LFDE+P R N+V+W +++T V +
Sbjct: 143 HALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNR--NVVAWNAVMTNAVLD 200
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
E + E GG + V++ + +AC+ +T + E +GFV
Sbjct: 201 GRPLETV----EAYFGLRGAGGMP--------NVVSVCAFFNACAGMTNLSLGEQFYGFV 248
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
K GF +V V N+++D Y + V +R VFDGM ++ V+W S++ YAQNG EA
Sbjct: 249 AKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAF 308
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
V+ ++ + + +S+VL A L L LG+ +H ++ ++ ++ V ++++DM
Sbjct: 309 FVYLGARRAGEEPTD-FMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDM 367
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-VRPNYIT 393
Y KCG ++ A + F +M ++N+ +W AMI GY A AL +F KMI PNYIT
Sbjct: 368 YGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYIT 427
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
V+VL+ACS GL +EG+ TM F IEP +EHY C+VDLL RAG + AY +I+GM
Sbjct: 428 LVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGM 487
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
++ VWG+LLG C++H +LG IAA+KLFEL+P + G HVLLSN+ A+AGRW +
Sbjct: 488 PMRPSISVWGALLGGCKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEAT 547
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
R MKN + K PG S + + VH F D H + +I L +L ++Q GY+
Sbjct: 548 DVRKEMKNVGIKKDPGRSWITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMP 607
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
D ++D+++EEKE + HSEKLA NLR+C DCH + IS
Sbjct: 608 DTQYALYDLEEEEKESEVFQHSEKLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKFIS 667
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ REI+VRD+ FH+FK+ CSC DYW
Sbjct: 668 GIAGREIIVRDNNMFHHFKNYECSCKDYW 696
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 23/265 (8%)
Query: 3 LSKSSSVS-SVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
K SVS SVV K +F+ +NNV SW S++ A+ G EA +
Sbjct: 253 FGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNV-SWCSMVVAYAQNGAEEEAFFVY 311
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
R+ PT + +C+ L L G+ H A ++FV+SAL+DMY KC
Sbjct: 312 LGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKC 371
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G + DA ++F E+PQ RN+V+W +M+ GY +A AL +F + ++ + E +
Sbjct: 372 GGIEDAEQVFFEMPQ--RNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQ-------ETA 422
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVT-EGAHGFVIKR---GFDSEVGVGNTLIDAYARGG 237
N + + +VL+ACSR G+T EG F + G + + ++D R G
Sbjct: 423 PNY----ITLVNVLTACSR---GGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAG 475
Query: 238 HVDVSRKVFDGMIEKDAVT-WNSII 261
+ + K+ GM + +++ W +++
Sbjct: 476 MEERAYKIIQGMPMRPSISVWGALL 500
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 3/162 (1%)
Query: 307 RLGKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
RLG+ H + +++ + ++++Y K A + V S+TA I+G
Sbjct: 34 RLGRAAHARALRLLSPALPPFLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYTAFISG 93
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
H R +AL F M++ G+RPN TF S A + A L+ + F P
Sbjct: 94 AAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLP 153
Query: 426 GVEHYGC-MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
C +D+ + G L A L + M + + V W +++
Sbjct: 154 DDAFVSCAALDMYFKTGCLALARRLFDEMPNR-NVVAWNAVM 194
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/593 (38%), Positives = 341/593 (57%), Gaps = 39/593 (6%)
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVF--VSSALIDMYS-KCGELSDARKL 130
S+ + C+ L H+ KQ H F G R S L+++Y+ G LS A
Sbjct: 3 SSLDSFLSKCTTLSLPHT-KQLHAHLFTTGQFRLPISPARSKLLELYALSLGNLSFAILT 61
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F +I R + W +++ G++Q+ N A +K + S + VD++
Sbjct: 62 FSQI--RTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMI------------SKSRKVDALT 107
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+ VL AC+RV + H ++++GF ++ +G TL+D YA+ G +D + KVFD M+
Sbjct: 108 CSFVLKACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMV 167
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
++D +WN++I+ +AQ EAL +F +M + K N +++ L A A LG + G+
Sbjct: 168 KRDIASWNALISGFAQGSKPTEALSLFKRM-EIDGFKPNEISVLGALSACAQLGDFKEGE 226
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
IH + + + V +IDMY KCG VD A F M K++ +W MI + MH
Sbjct: 227 KIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMH 286
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
+AL+LF KM ++GV P+ +++++VL AC+H GLV+EG+ N+M ++P V+H
Sbjct: 287 GEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSM-ENCGVKPNVKH 345
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
YG +VDLLGRAG+L EAYD++ M D V+W +LLGA R H+NV++ E ++KL E+
Sbjct: 346 YGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMG 405
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
N+CG VLLSN+YA RW DV R R MKNR + K PG S +E G +H F DK H
Sbjct: 406 SNHCGDFVLLSNVYAARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSH 465
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
+IY L+E+ +++E GYV + + V+HD+ +E+KE L HSEKLA
Sbjct: 466 ESWREIYAKLDEIRFRVKEYGYVAETSFVLHDIGEEDKENVLGHHSEKLAVAFGLISTSE 525
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCH VI+LISK+ DREI+VRD RFH FK+G CSC DYW
Sbjct: 526 GTPIQVIKNLRICGDCHFVIKLISKIYDREIIVRDRVRFHRFKEGFCSCRDYW 578
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 167/348 (47%), Gaps = 17/348 (4%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN++I + + A + SM S T +K+C+ + Q H
Sbjct: 73 WNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQIHTHIV 132
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
GF D + + L+D+Y+K GE+ A K+FDE+ + R+I SW ++++G+ Q EA
Sbjct: 133 RKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVK--RDIASWNALISGFAQGSKPTEA 190
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
L LFK E G N +++ LSAC+++ E HG++ FD
Sbjct: 191 LSLFKRM-----EIDGFKPN-------EISVLGALSACAQLGDFKEGEKIHGYIKVERFD 238
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
V N +ID YA+ G VD + VF+ M KD VTWN++I +A +G +AL++F++
Sbjct: 239 MNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEK 298
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M +S V + V+ AVL A H G++ G + + + ++ +V S++D+ + G
Sbjct: 299 MDQS-GVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMENCGVKPNVKHYGSVVDLLGRAG 357
Query: 340 QVDLARKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
++ A N M ++ W ++ H A + K+++ G
Sbjct: 358 RLHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMG 405
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 111/247 (44%), Gaps = 37/247 (14%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ V K ++ SWN++I+ A+G EAL F M P + A+ +C+ L
Sbjct: 162 VFDEMV-KRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLG 220
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G++ H + F + V + +IDMY+KCG + A +F+ + R ++IV+W +M
Sbjct: 221 DFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCR-KDIVTWNTM 279
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ + + +AL LF++ + V D V+ +VL AC+
Sbjct: 280 IMAFAMHGEGCKALELFEKM------------DQSGVSPDDVSYLAVLCACN-------- 319
Query: 208 EGAHGFVIKRGF-----------DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE-KDAV 255
HG +++ GF V +++D R G + + + + M D V
Sbjct: 320 ---HGGLVEEGFRLFNSMENCGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIV 376
Query: 256 TWNSIIA 262
W +++
Sbjct: 377 LWQTLLG 383
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/701 (34%), Positives = 373/701 (53%), Gaps = 94/701 (13%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M L ++S +++++ ++ LF++ + ++ S+N++IA L+ ++ A
Sbjct: 43 MPLRTTASYNALIAGYFRNHLPDAALGLFHR-MPSRDLGSYNALIAGLSLRRHTLP--DA 99
Query: 61 FSSMRKLSLTPTRSTFPCAIK----------SCSALHDLHSGKQAHQQAFIFGF------ 104
+++ + L P+ +F ++ + H + + GF
Sbjct: 100 AAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRV 159
Query: 105 -----------HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
+DV +A++ Y + G +++AR LFDE+P+ RN+VSWT+M++GY Q
Sbjct: 160 NEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEMPK--RNVVSWTAMISGYAQ 217
Query: 154 NDNAREALLLFKEFLLEESEC-----------GGASENSDNVFVDSVAIASVLSACSRVT 202
N A LF E + + +E G E+++++F
Sbjct: 218 NGKVILARKLF-EVMPDRNEVSWTAMLVGYIQAGHVEDAEDLF----------------- 259
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
N + D V N ++ + + G VD ++ +F+ M +D TW+++I
Sbjct: 260 -NAMP------------DHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIK 306
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
+Y QN EAL F +M+ ++ N + ++L A L G+ +H +++ +
Sbjct: 307 VYEQNEFLMEALSTFREML-CRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFD 365
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
V +++I MY KCG +D A++ FN + K+V W +MI GY H EAL +F +
Sbjct: 366 TDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDL 425
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
A + P+ IT++ VL+ACS+ G V+EG N+MG +I G HY CMVDLLGRAG
Sbjct: 426 RLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGL 485
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
+ EA DLI M V+ D ++WG+L+GACR+HKN ++ E+AAKKL ELEP + G +VLLS+I
Sbjct: 486 VDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHI 545
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD-KEHPQHEKIYEYLEE 561
Y + GRWED R + +R L K+PG S +E VH F GD HP+H I LEE
Sbjct: 546 YTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEE 605
Query: 562 LNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRV 603
L+ L E GY D + V+HDVD+E+K +LR HSE+ A NLRV
Sbjct: 606 LDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRV 665
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CGDCH+ I+LI+K+ REI++RD+ RFH+FKDGLCSC DYW
Sbjct: 666 CGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 23/247 (9%)
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
V N I R G+++ +R FD M + ++N++IA Y +N L AL +F +M
Sbjct: 17 VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD---QVIKMDLEESVIVGTSIIDMYCKCG 339
NA+ IA L + R + D + + L SV+ TS++ Y + G
Sbjct: 77 RDLGSYNAL--------IAGLSLRR--HTLPDAAAALASIPLPPSVVSFTSLLRGYVRHG 126
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+ A + F+QM E+N ++T ++ G+ R EA LF +M V + ++LS
Sbjct: 127 LLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDV----VARTAMLS 182
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
AG + E + M V + M+ + GK+ A L E M + +
Sbjct: 183 GYCQAGRITEARALFDEMPKR-----NVVSWTAMISGYAQNGKVILARKLFEVMPDRNE- 236
Query: 460 VVWGSLL 466
V W ++L
Sbjct: 237 VSWTAML 243
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 248/693 (35%), Positives = 367/693 (52%), Gaps = 88/693 (12%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL-HDLHSGK 93
+++VF +N++I A GD AL F +MR+ P TF + + +
Sbjct: 110 RDSVF-YNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCG 168
Query: 94 QAHQQAFIFGFH-RDVFVSSALIDMYSK--------CGELSDARKLFDEIPQRIRNIVSW 144
Q H G V +AL+ +Y K C + ARKLFDE+P+R + ++W
Sbjct: 169 QMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKR--DELTW 226
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEE------------SECGGASENSD--------NV 184
T+M+TGYV+ND+ A +F E ++E CG E +
Sbjct: 227 TTMITGYVRNDDLNGAREVF-EAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGI 285
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE----VGVGNTLIDAYARGGHVD 240
D + +++SAC+ V + + H +++K + + V N LI Y + VD
Sbjct: 286 QFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVD 345
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIY-------------------------------AQNGL 269
+RK+F M ++ +TWN+I++ Y AQNG
Sbjct: 346 EARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGF 405
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
E L +F QM C+ + L A + LG L G+ +H Q++ + E S+ VG
Sbjct: 406 GDEGLKLFKQMRLDGFEPCD-FAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGN 464
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
++I MY KCG V+ A F M ++ SW +MIA G H +A++LF +M+K GV P
Sbjct: 465 AMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFP 524
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ ITF++VL+ACSHAGLV++G H+ N+M + I P +HY MVDL RAG A +
Sbjct: 525 DRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIV 584
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I+ M K VW +LL CRIH N+DLG AA++LF+L P N G +VLLSNIYA+ GRW
Sbjct: 585 IDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRW 644
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
+V + R LM+++ + K P S +E+ KVH F+V D HP+ +Y YLE+L ++++++
Sbjct: 645 NEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKL 704
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GY+ D V+HD++ E+KE L HSEKLA N+R+CGDCH
Sbjct: 705 GYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAF 764
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +SKV REI+VRD KRFH+FK+G CSC DYW
Sbjct: 765 KFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 184/434 (42%), Gaps = 75/434 (17%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
D + LI Y G L R++F+ P +R+ V + +M+TGY N + AL LF+
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 167 ----------------------FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
F+ E +CG + V+ +SVL+A V V
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVS-SSVLNALLSVYVK 196
Query: 205 GVTE---GAHGFVIKRGFDSEVG-----VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
+E V R E+ T+I Y R ++ +R+VF+ M+E
Sbjct: 197 RASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAA 256
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
WN++I+ Y G EAL + +M + ++ + +T + ++ A A++G ++GK +H +
Sbjct: 257 WNAMISGYVHCGCFQEALTLCRKM-RFLGIQFDDITYTTIISACANVGSFQMGKQVHAYI 315
Query: 317 IKMDLEES----VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
+K +L + + V ++I +YCK +VD ARK F M +N+ +W A+++GY R
Sbjct: 316 LKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRM 375
Query: 373 REA-------------------------------LDLFYKMIKAGVRPNYITFVSVLSAC 401
EA L LF +M G P F L+AC
Sbjct: 376 EEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTAC 435
Query: 402 SHAGLVQEGWHW---LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
S G ++ G L +G+E ++ G M+ + + G ++ A + M D
Sbjct: 436 SVLGALENGRQLHAQLVHLGYESSLSVG----NAMISMYAKCGVVEAAESVFVTMP-SVD 490
Query: 459 FVVWGSLLGACRIH 472
V W S++ A H
Sbjct: 491 LVSWNSMIAALGQH 504
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/635 (36%), Positives = 366/635 (57%), Gaps = 36/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K V ++ V SWN++I ++ G E+++ F M P T +++C L
Sbjct: 332 IFDKMVLRDAV-SWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLG 389
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL GK H G+ D S+ LI+MY+KCG L ++++F + + ++ VSW SM
Sbjct: 390 DLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGM--KCKDSVSWNSM 447
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y+QN + EA+ LFK +V DSV +LS +++ +
Sbjct: 448 INVYIQNGSFDEAMKLFKMM-------------KTDVKPDSVTYVMLLSMSTQLGDLXLG 494
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H + K GF+S + V NTL+D YA+ G + S KVF+ M +D +TWN+IIA +
Sbjct: 495 KELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHS 554
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
L + +M ++ V + T+ ++L + L R GK IH + K+ LE V V
Sbjct: 555 EDCNLGLRMISRM-RTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPV 613
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G +I+MY KCG + + + F MK K+V +WTA+I+ GM+ ++A+ F +M AG+
Sbjct: 614 GNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGI 673
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+++ FV+++ ACSH+GLV+EG ++ + M ++ IEP +EHY C+VDLL R+ L +A
Sbjct: 674 VPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAE 733
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
D I M +K D +WG+LL ACR+ + ++ + ++++ EL P++ GY+VL+SN+YA G
Sbjct: 734 DFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALG 793
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+W+ V R +K R L K PG S +E++ KV+ F G K Q E++ + L L +
Sbjct: 794 KWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMA 853
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
+ GY+ ++ V+HD+D++EK L HSE+LA NLRVC DCHT
Sbjct: 854 KEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHT 913
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
V + ISK+ RE++VRD+ RFH FKDG CSCGDYW
Sbjct: 914 VTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/461 (32%), Positives = 246/461 (53%), Gaps = 29/461 (6%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
T+ ++F NNV+ WNS+I L G EAL +S +++ L P TFP I +
Sbjct: 124 TSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINA 183
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
C+ L D K H + GF D+++ +ALIDMY + +L ARK+F+E+P +R++V
Sbjct: 184 CAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP--LRDVV 241
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
SW S+++GY N EAL ++ F + V DS ++SVL AC
Sbjct: 242 SWNSLISGYNANGYWNEALEIYYRF------------RNLGVVPDSYTMSSVLRACG--G 287
Query: 203 VNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSI 260
+ V EG HG + K G +V V N L+ Y + + R++FD M+ +DAV+WN++
Sbjct: 288 LGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTM 347
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
I Y+Q GL E++ +F +MV K + +T++++L A HLG L GK +HD +I
Sbjct: 348 ICGYSQVGLYEESIKLFMEMV--NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG 405
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
E +I+MY KCG + +++ F+ MK K+ SW +MI Y + EA+ LF
Sbjct: 406 YECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF- 464
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW---LNTMGHEFNIEPGVEHYGCMVDLL 437
KM+K V+P+ +T+V +LS + G + G L MG NI +VD+
Sbjct: 465 KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVS----NTLVDMY 520
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
+ G++ ++ + E MK + D + W +++ +C ++ +LG
Sbjct: 521 AKCGEMGDSLKVFENMKAR-DIITWNTIIASCVHSEDCNLG 560
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 110/223 (49%), Gaps = 6/223 (2%)
Query: 193 SVLSACSRVTVNGVTEGA----HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD- 247
++ S+ SR + T H +I G V LI YA S VF
Sbjct: 73 TLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRL 132
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ WNSII NGL +EAL ++ + + ++ + T +V+ A A L
Sbjct: 133 ASPSNNVYXWNSIIRALTHNGLFSEALSLYSE-TQRIRLQPDTYTFPSVINACAGLLDFE 191
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
+ K IHD+V+ M + +G ++IDMYC+ +D ARK F +M ++V SW ++I+GY
Sbjct: 192 MAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 251
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
+ EAL+++Y+ GV P+ T SVL AC G V+EG
Sbjct: 252 ANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 294
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/656 (35%), Positives = 365/656 (55%), Gaps = 70/656 (10%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S ++++S K +L +F++ + ++ S+N+VIA + G S +AL F M++
Sbjct: 91 SWNAMLSAYSKSGNVEDLRAVFDQ-MSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEE 149
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
T T + +CS L D+ GKQ H + VFV +AL +MY+KCG L A
Sbjct: 150 GFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQA 209
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R LFD + + N+VSW SM++GY+QN LF E S + D
Sbjct: 210 RWLFDRMVNK--NVVSWNSMISGYLQNGQPETCTKLFCEM------------QSSGLMPD 255
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
V I+++LSA Y + G++D + K F
Sbjct: 256 QVTISNILSA-----------------------------------YFQCGYIDEACKTFR 280
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ EKD V W +++ AQNG +AL +F +M+ +V+ + T+S+V+ + A L L
Sbjct: 281 EIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLE-NVRPDNFTISSVVSSCARLASLC 339
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
G+ +H + + ++ ++V ++++DMY KCG+ A F +M +NV SW +MI GY
Sbjct: 340 QGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYA 399
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+ + EAL L+ +M+ ++P+ ITFV VLSAC HAGLV+ G + ++ + P
Sbjct: 400 QNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTF 459
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
+HY CM++LLGRAG + +A DLI+ M + + ++W +LL CRI+ +V+ GE+AA+ LFE
Sbjct: 460 DHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFE 519
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
L+P+N G +++LSNIYA GRW+DV RSLMKN ++ K +S +E+ +VH F+ D+
Sbjct: 520 LDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDR 579
Query: 548 EHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------- 599
H + E+IYE L L KLQE G+ D V+HDV +EEK ++ HSEKLA
Sbjct: 580 THSETEQIYEELNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKK 639
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
N+RVCGDCH ++ +SK++ R I++RD RFH+F +G CSC D W
Sbjct: 640 PHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 198/419 (47%), Gaps = 69/419 (16%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
D F+ + L+ +Y+K G LSDAR LFD++ +R ++ SW +ML+ Y ++ N + +F +
Sbjct: 57 DTFLQNRLLHLYAKSGNLSDARDLFDKMSRR--DVFSWNAMLSAYSKSGNVEDLRAVFDQ 114
Query: 167 FLLEES----------ECGGASENSDNVFV---------DSVAIASVLSACSRVTVNGVT 207
+ ++ G S + FV SVL ACS++
Sbjct: 115 MSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRG 174
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG ++ V V N L + YA+ G +D +R +FD M+ K+ V+WNS+I+ Y QN
Sbjct: 175 KQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQN 234
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G +F +M +S+ + + VT+S +L A
Sbjct: 235 GQPETCTKLFCEM-QSSGLMPDQVTISNILSA---------------------------- 265
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
Y +CG +D A K F ++KEK+ WT M+ G + + +AL LF +M+ V
Sbjct: 266 -------YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENV 318
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKL 443
RP+ T SV+S+C+ + +G H + GV+H +VD+ + G+
Sbjct: 319 RPDNFTISSVVSSCARLASLCQG-----QAVHGKAVIFGVDHDLLVSSALVDMYSKCGET 373
Query: 444 KEAYDLIEGMKVKADFVVWGSL-LGACRIHKNVDLGEIAAKKLFE-LEPNNCGYHVLLS 500
+A+ + + M + + + W S+ LG + K+++ + + L E L+P+N + +LS
Sbjct: 374 ADAWIVFKRMLTR-NVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLS 431
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/629 (36%), Positives = 358/629 (56%), Gaps = 34/629 (5%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGK 93
K NV SW +++A G +E LR F +M + + P F I SCS + G
Sbjct: 90 KRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGW 149
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H A G +V +ALI MYS+ ++ A ++ E+P ++ S+ ++ G ++
Sbjct: 150 QCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGL--DVFSYNIIINGLLE 207
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N EAL + + EC + D+V + CS + + H
Sbjct: 208 NGYPSEALEVLDRMV---DEC---------IVWDNVTYVTAFGLCSHLKDLRLGLQVHCR 255
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+ + G + + V + +ID Y + G++ +RKVF+ + K+ V+W +I+A Y+QNG EA
Sbjct: 256 MFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEA 315
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L+ F +M + + N T + +L + A + L GK +H ++ K E+ +IVG ++I+
Sbjct: 316 LNFFPEM-EVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALIN 374
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY K G ++ A K F +M ++ +W+AMI G H REAL +F +M+ A P+Y+T
Sbjct: 375 MYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVT 434
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
FV VLSAC+H G VQEG+++LN + + IEPGVEHY C+V LL +AG+L EA + ++
Sbjct: 435 FVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKST 494
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
VK D V W +LL AC +H+N LG+ A+ + +++P + G ++LLSN+YA A RW+ V
Sbjct: 495 PVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVV 554
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
+ R LM+ R + K PG S +E+R +H F+ K HP+ +IYE ++EL ++ +GYV
Sbjct: 555 KIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVP 614
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
D+ +V HDV+ E+K + HSEKLA NLR+C DCH+ ++LIS
Sbjct: 615 DIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLIS 674
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
KV +R I+VRD+ RFH F DG CSC DYW
Sbjct: 675 KVTNRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 195/383 (50%), Gaps = 22/383 (5%)
Query: 88 DLHSGKQAHQQAFIF--GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+L GK H I ++ ++LI++Y+KC ++ AR LFD + R RN+VSW
Sbjct: 40 NLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGM--RKRNVVSWG 97
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+++ GY N E L LFK + + D + + A+++S+CS
Sbjct: 98 ALMAGYFHNGLVLEVLRLFKTMI-----------SVDYMRPNEYIFATIISSCS--DSGQ 144
Query: 206 VTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
V EG HG+ +K G V N LI Y+R V + V+ + D ++N II
Sbjct: 145 VVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIING 204
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
+NG +EAL+V D+MV V N ++A L +HL LRLG +H ++ + E
Sbjct: 205 LLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLC-SHLKDLRLGLQVHCRMFRTGAEY 263
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
V ++IIDMY KCG + ARK FN+++ KNV SWTA++A Y + EAL+ F +M
Sbjct: 264 DSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEME 323
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
G+ PN TF +L++C+ + G L+T + E + ++++ ++G +
Sbjct: 324 VDGLLPNEYTFAVLLNSCAGISALGHG-KLLHTRIKKSGFEDHIIVGNALINMYSKSGSI 382
Query: 444 KEAYDLIEGMKVKADFVVWGSLL 466
+ A+ + M + D + W +++
Sbjct: 383 EAAHKVFLEMICR-DSITWSAMI 404
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 139/308 (45%), Gaps = 18/308 (5%)
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
K FLL+ S G E++ + +SA ++ G AH + + +
Sbjct: 12 KPFLLKSSTVGHPLEHTIQLLK--------VSADTKNLKFGKMIHAHLIITNQATKDNIV 63
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
N+LI+ YA+ + V+R +FDGM +++ V+W +++A Y NGL E L +F M+
Sbjct: 64 QVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVD 123
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
++ N + ++ + + G + G H +K L V ++I MY + V A
Sbjct: 124 YMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGA 183
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
+ ++ +V S+ +I G + EAL++ +M+ + + +T+V+ CSH
Sbjct: 184 MSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHL 243
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
++ L H G E+ ++D+ G+ G + A + ++ K + V
Sbjct: 244 KDLR-----LGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTK-NVV 297
Query: 461 VWGSLLGA 468
W ++L A
Sbjct: 298 SWTAILAA 305
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/660 (36%), Positives = 353/660 (53%), Gaps = 66/660 (10%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
NV +WNS+ + G + L F M + P + +CS L DL SGK H
Sbjct: 307 NVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIH 366
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A G DVFV +AL+++Y+ C + +A+ +FD +P R N+V+W S+ + YV
Sbjct: 367 GFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHR--NVVTWNSLSSCYVNCGF 424
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
++ L +F+E +L + V D V + S+L ACS + + HGF ++
Sbjct: 425 PQKGLNVFREMVL------------NGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVR 472
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G +V V N L+ YA+ V ++ VFD + ++ +WN I+ Y N + L +
Sbjct: 473 HGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYM 532
Query: 277 FDQM----VKSTDV------------------------------KCNAVTLSAVLLAIAH 302
F QM VK+ ++ K + T+ ++L A +
Sbjct: 533 FSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSL 592
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
LR+GK IH V + + + +++DMY KCG + L+R F+ M K+V SW M
Sbjct: 593 SECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTM 652
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
I GMH +EAL LF KM+ + V+P+ TF VLSACSH+ LV+EG N+M +
Sbjct: 653 IFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHL 712
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
+EP EHY C+VD+ RAG L+EAY I+ M ++ + W + L CR++KNV+L +I+A
Sbjct: 713 VEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISA 772
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
KKLFE++PN +V L NI A W + + R LMK R + KTPG S + +VH F
Sbjct: 773 KKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTF 832
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
+ GDK + + +KIY +L+EL K++ GY D V+HD+DQEEK +L HSEKLA
Sbjct: 833 VAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAF 892
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCH I+ +S VV IVVRDS RFH+FK+G CSC D+W
Sbjct: 893 GILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 226/449 (50%), Gaps = 31/449 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V +WNS+ A G + L F M + T + CS L DL SGK+ H
Sbjct: 105 DVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIH 164
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G DVFVSSA ++ Y+KC + +A+ +FD +P R ++V+W S+ + YV
Sbjct: 165 GFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHR--DVVTWNSLSSCYVNCGF 222
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
++ L +F+E +L D V D V ++ +LSACS + + HGF +K
Sbjct: 223 PQKGLNVFREMVL------------DGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALK 270
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G V V N L++ Y V ++ VFD M ++ +TWNS+ + Y G + L+V
Sbjct: 271 HGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNV 330
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F +M VK + + +S++L A + L L+ GK IH +K + E V V T+++++Y
Sbjct: 331 FREM-GLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYA 389
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
C V A+ F+ M +NV +W ++ + Y ++ L++F +M+ GV+P+ +T +S
Sbjct: 390 NCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLS 449
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGV--EHYGC--MVDLLGRAGKLKEA---YDL 449
+L ACS ++ G + H F + G+ + + C ++ L + ++EA +DL
Sbjct: 450 ILHACSDLQDLKSG-----KVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDL 504
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLG 478
I +V + W +L A +K + G
Sbjct: 505 IPHREVAS----WNGILTAYFTNKEYEKG 529
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 210/414 (50%), Gaps = 25/414 (6%)
Query: 56 EALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALI 115
EA++ ++S R + P + F K+C+A D KQ H A G DV + +A I
Sbjct: 23 EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82
Query: 116 DMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG 175
Y KC + AR++FD++ R++V+W S+ YV ++ L +F++ L
Sbjct: 83 HAYGKCKCVEGARRVFDDLVA--RDVVTWNSLSACYVNCGFPQQGLNVFRKMGL------ 134
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
+ V + + ++S+L CS + + HGFV++ G +V V + ++ YA+
Sbjct: 135 ------NKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAK 188
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
V ++ VFD M +D VTWNS+ + Y G + L+VF +MV VK + VT+S
Sbjct: 189 CLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLD-GVKPDPVTVSC 247
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
+L A + L L+ GK IH +K + E+V V +++++Y C V A+ F+ M +N
Sbjct: 248 ILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRN 307
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
V +W ++ + Y ++ L++F +M GV+P+ + S+L ACS ++ G
Sbjct: 308 VITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG----- 362
Query: 416 TMGHEFNIEPGV--EHYGC--MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
H F ++ G+ + + C +V+L ++EA + + M + + V W SL
Sbjct: 363 KTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHR-NVVTWNSL 415
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 20/232 (8%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K + +W+ VI + EA+ F M+ + P +T +++CS L GK+
Sbjct: 542 KADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKE 601
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H F D+ ++AL+DMY+KCG LS +R +FD +P I+++ SW +M+ +
Sbjct: 602 IHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMP--IKDVFSWNTMIFANGMH 659
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF- 213
N +EAL LF++ LL V DS VLSACS + V EG F
Sbjct: 660 GNGKEALSLFEKMLLSM------------VKPDSATFTCVLSACSHSML--VEEGVQIFN 705
Query: 214 VIKRG--FDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
+ R + E ++D Y+R G ++ + M +E A+ W + +A
Sbjct: 706 SMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLA 757
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/629 (36%), Positives = 362/629 (57%), Gaps = 38/629 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + ++ SWNS++A + G ++ L+ + + ++ TF A+ +CS L
Sbjct: 459 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES 518
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K H + GFH + V +AL+ MY K G + +A+K+ +PQ R V+W +++ G+
Sbjct: 519 KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDR--VTWNALIGGHA 576
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR---VTVNGVTEG 209
+N+ EA+ +K L+ E + + + + SVL ACS + +G+
Sbjct: 577 ENEEPNEAVKAYK--LIREK----------GIPANYITMVSVLGACSAPDDLLKHGMPIH 624
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
AH ++ GF+S+ V N+LI YA+ G ++ S +FDG+ K +TWN+++A A +G
Sbjct: 625 AH--IVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGC 682
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EAL +F +M ++ V + + S L A A+L VL G+ +H VIK+ E + V
Sbjct: 683 GEEALKIFGEM-RNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTN 741
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+ +DMY KCG++ K Q ++ SW +I+ + H ++A + F++M+K G +P
Sbjct: 742 AAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKP 801
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+++TFVS+LSAC+H GLV EG + ++M EF + PG+EH C++DLLGR+G+L A
Sbjct: 802 DHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGF 861
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I+ M V + + W SLL ACRIH N++L A+ L EL+P++ +VL SN+ A +G+W
Sbjct: 862 IKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKW 921
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
EDVE R M + + K P S V+L+ KVH+F +G+K HPQ +I L EL +E
Sbjct: 922 EDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEA 981
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GYV D + +HD+D+E+KE L HSE+LA NLRVCGDCH+V
Sbjct: 982 GYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVY 1041
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSC 640
+ +S +V R+IV+RD RFH+F G CSC
Sbjct: 1042 KFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 191/379 (50%), Gaps = 16/379 (4%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N LF + D +NV SW S++ + G+ E L + MR+ ++ ++TF SC
Sbjct: 249 NAQKLFEEMPD-HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC 307
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
L D G Q +GF V V+++LI M+S + +A +FD + + +I+S
Sbjct: 308 GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNEC--DIIS 365
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W +M++ Y + RE+L F +E +S ++S+LS CS V
Sbjct: 366 WNAMISAYAHHGLCRESLRCFHWMRHLHNE------------TNSTTLSSLLSVCSSVDN 413
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
G HG V+K G DS V + NTL+ Y+ G + + VF M E+D ++WNS++A
Sbjct: 414 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 473
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y Q+G + L + ++++ V N VT ++ L A ++ L K +H +I +
Sbjct: 474 YVQDGKCLDGLKILAELLQMGKVM-NHVTFASALAACSNPECLIESKIVHALIIVAGFHD 532
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+IVG +++ MY K G + A+K M + + +W A+I G+ + EA+ + +
Sbjct: 533 FLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIR 592
Query: 384 KAGVRPNYITFVSVLSACS 402
+ G+ NYIT VSVL ACS
Sbjct: 593 EKGIPANYITMVSVLGACS 611
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 196/403 (48%), Gaps = 31/403 (7%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
FP +K S + +GK H + + +F ++ LI+MYSK G + AR +FDE+
Sbjct: 99 FP--LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEM- 155
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
R RN SW++ML+GYV+ EA+ LF + E G +AS++
Sbjct: 156 -RHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNG------------FMVASLI 202
Query: 196 SACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+ACSR EG HGFV+K G +V VG L+ Y G V ++K+F+ M + +
Sbjct: 203 TACSRSGYMA-DEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHN 261
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V+W S++ Y+ +G E L+V+ +M + V N T + V + L LG +
Sbjct: 262 VVSWTSLMVGYSDSGNPGEVLNVYQRM-RQEGVSGNQNTFATVTSSCGLLEDQVLGYQVL 320
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+I+ E+SV V S+I M+ V+ A F+ M E ++ SW AMI+ Y H R
Sbjct: 321 GHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCR 380
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC- 432
E+L F+ M N T S+LS CS + W + H ++ G++ C
Sbjct: 381 ESLRCFHWMRHLHNETNSTTLSSLLSVCS----SVDNLKWGRGI-HGLVVKLGLDSNVCI 435
Query: 433 ---MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++ L AG+ ++A + + M + D + W S++ AC +
Sbjct: 436 CNTLLTLYSEAGRSEDAELVFQAM-TERDLISWNSMM-ACYVQ 476
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 145/286 (50%), Gaps = 8/286 (2%)
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
A+ L S +T + H F I + + NTLI+ Y++ G+++ +R VFD M
Sbjct: 96 AVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEM 155
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR-L 308
++ +W+++++ Y + GL EA+ +F QM V+ N +++++ A + G +
Sbjct: 156 RHRNEASWSTMLSGYVRVGLYEEAVGLFCQMW-GLGVEPNGFMVASLITACSRSGYMADE 214
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
G +H V+K + V VGT+++ Y G V A+K F +M + NV SWT+++ GY
Sbjct: 215 GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSD 274
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH--EFNIEPG 426
E L+++ +M + GV N TF +V S+C GL+++ +GH ++ E
Sbjct: 275 SGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDS 331
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
V ++ + ++EA + + M + D + W +++ A H
Sbjct: 332 VSVANSLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISAYAHH 376
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/637 (36%), Positives = 359/637 (56%), Gaps = 41/637 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW+++++ GD +L FS M + + P TF +K+C L+ L G
Sbjct: 438 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 497
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H GF V V ++L+DMYSKCG +++A K+F I R +++SW +M+ G+V
Sbjct: 498 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDR--SLISWNAMIAGFV 555
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+AL F G E + D + S+L ACS + + HG
Sbjct: 556 HAGYGSKALDTF----------GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 605
Query: 213 FVIKRGF--DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
F+++ GF S + +L+D Y + G++ +RK FD + EK ++W+S+I YAQ G
Sbjct: 606 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 665
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD--LEESVIVG 328
EA+ +F ++ + + + ++ LS+++ A +LR GK + +K+ LE SV+
Sbjct: 666 VEAMGLFKRL-QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL-- 722
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
S++DMY KCG VD A K F +M+ K+V SWT +I GYG H ++++ +FY+M++ +
Sbjct: 723 NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 782
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+ + +++VLSACSH+G+++EG + + I+P VEHY C+VDLLGRAG+LKEA
Sbjct: 783 PDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKH 842
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
LI+ M +K + +W +LL CR+H +++LG+ K L ++ N +V++SN+Y AG
Sbjct: 843 LIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGY 902
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL-Q 567
W + R L + L K G S VE+ +VH F G+ HP I E L+E +L +
Sbjct: 903 WNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLRE 962
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------------NLRVCGD 606
E+GYV + +HD+D E KE LR HSEKLA NLRVC D
Sbjct: 963 ELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVD 1022
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
CH I+ +SK+ VVRD+ RFH F+DG CSCGDY
Sbjct: 1023 CHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 213/406 (52%), Gaps = 35/406 (8%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
++ S+ LIDMY KC E A K+FD +P+ RN+VSW+++++G+V N + + +L LF E
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPE--RNVVSWSALMSGHVLNGDLKGSLSLFSE 468
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVG 224
++ + ++ L AC +N + +G HGF +K GF+ V
Sbjct: 469 M------------GRQGIYPNEFTFSTNLKACG--LLNALEKGLQIHGFCLKIGFEMMVE 514
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
VGN+L+D Y++ G ++ + KVF ++++ ++WN++IA + G ++ALD F M ++
Sbjct: 515 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN 574
Query: 285 -DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL--EESVIVGTSIIDMYCKCGQV 341
+ + TL+++L A + G++ GK IH +++ S + S++D+Y KCG +
Sbjct: 575 IKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYL 634
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
ARKAF+Q+KEK + SW+++I GY EA+ LF ++ + + + S++
Sbjct: 635 FSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVF 694
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEH--YGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
+ L+++G + G+E +VD+ + G + EA M++K D
Sbjct: 695 ADFALLRQG---KQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DV 750
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFEL-----EPNNCGYHVLLS 500
+ W ++ H LG+ + + +E+ EP+ Y +LS
Sbjct: 751 ISWTVVITGYGKH---GLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 793
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/636 (35%), Positives = 356/636 (55%), Gaps = 35/636 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF + +K++V ++N++I + G E++ F MR+ P+ TF +K+ LH
Sbjct: 206 LFEEIPEKDSV-TFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G+Q H + GF RD V + ++D YSK + + R LFDE+P+ + VS+ +
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE--LDFVSYNVV 322
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ Y Q D +L F+E +C G + A++LS + ++ +
Sbjct: 323 ISSYSQADQYEASLHFFREM-----QCMGFDRR-------NFPFATMLSIAANLSSLQMG 370
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H + DS + VGN+L+D YA+ + + +F + ++ V+W ++I+ Y Q
Sbjct: 371 RQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK 430
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL L +F +M + ++++ + T + VL A A L LGK +H +I+ E+V
Sbjct: 431 GLHGAGLKLFTKM-RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G+ ++DMY KCG + A + F +M ++N SW A+I+ + + A+ F KMI++G+
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGL 549
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+P+ ++ + VL+ACSH G V++G + M + I P +HY CM+DLLGR G+ EA
Sbjct: 550 QPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAE 609
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP-NNCGYHVLLSNIYANA 506
L++ M + D ++W S+L ACRIHKN L E AA+KLF +E + +V +SNIYA A
Sbjct: 610 KLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAA 669
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
G WE V + M+ R + K P +S VE+ K+H F D+ HP ++I + EL ++
Sbjct: 670 GEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEI 729
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+ GY D +SV+ DVD++ K +L+ HSE+LA NLR C DCH
Sbjct: 730 EREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCH 789
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+LISK+V REI VRD+ RFH+F +G+CSCGDYW
Sbjct: 790 AAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 222/477 (46%), Gaps = 32/477 (6%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M + S ++++S K ++ LF+ D+ V +W ++ AR EA +
Sbjct: 74 MPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRT-VVTWTILMGWYARNSHFDEAFKL 132
Query: 61 FSSM-RKLSLT-PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVF--VSSALID 116
F M R S T P TF + C+ ++ Q H A GF + F VS+ L+
Sbjct: 133 FRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLK 192
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
Y + L A LF+EIP+ ++ V++ +++TGY ++ E++ LF L+ + G
Sbjct: 193 SYCEVRRLDLACVLFEEIPE--KDSVTFNTLITGYEKDGLYTESIHLF----LKMRQSG- 245
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
+ SD F + VL A + + + H + GF + VGN ++D Y++
Sbjct: 246 -HQPSDFTF------SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKH 298
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
V +R +FD M E D V++N +I+ Y+Q +L F +M + + +
Sbjct: 299 DRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM-QCMGFDRRNFPFATM 357
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A+L L++G+ +H Q + + + VG S++DMY KC + A F + ++
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT 417
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA-CSHAGLVQEGWHWLN 415
SWTA+I+GY L LF KM + +R + TF +VL A S A L+ L
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL------LG 471
Query: 416 TMGHEFNIEPG----VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
H F I G V +VD+ + G +K+A + E M + + V W +L+ A
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISA 527
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 176/402 (43%), Gaps = 58/402 (14%)
Query: 103 GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR------------------------- 137
GF D S+ +++ + G++S ARK++DE+P +
Sbjct: 43 GFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLF 102
Query: 138 ----IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
R +V+WT ++ Y +N + EA LF++ + S C D V +
Sbjct: 103 DAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ-MCRSSSC---------TLPDHVTFTT 152
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSE--VGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
+L C+ H F +K GFD+ + V N L+ +Y +D++ +F+ + E
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
KD+VT+N++I Y ++GL E++ +F +M +S + T S VL A+ L LG+
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSD-FTFSGVLKAVVGLHDFALGQQ 271
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
+H + VG I+D Y K +V R F++M E + S+ +I+ Y +
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP------ 425
+L F +M G F ++LS ++ +Q MG + + +
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQ--------MGRQLHCQALLATAD 383
Query: 426 GVEHYG-CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ H G +VD+ + +EA + + + + V W +L+
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT-VSWTALI 424
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 34/221 (15%)
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV---------------------------- 245
+IK GFD++ N +++ R G V +RKV
Sbjct: 39 IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSA 98
Query: 246 ---FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC-NAVTLSAVLLAIA 301
FD M ++ VTW ++ YA+N EA +F QM +S+ + VT + +L
Sbjct: 99 RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
Query: 302 HLGVLRLGKCIHDQVIKM--DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
+H +K+ D + V ++ YC+ ++DLA F ++ EK+ ++
Sbjct: 159 DAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTF 218
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+I GY E++ LF KM ++G +P+ TF VL A
Sbjct: 219 NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/637 (35%), Positives = 361/637 (56%), Gaps = 36/637 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
L K + ++ SWNS++A G S++AL SM + + TF A+ +C +
Sbjct: 418 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPE 477
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H + G + + +AL+ MY K G +S +R++ ++P+R ++V+W ++
Sbjct: 478 FFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRR--DVVAWNAL 535
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY +N++ +AL F+ +E G S N + + SVLSAC V + +
Sbjct: 536 IGGYAENEDPDKALAAFQTLRVE-----GVSANY-------ITVVSVLSAC-LVPGDLLE 582
Query: 208 EGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
G H +++ GF+S+ V N+LI YA+ G + S+ +F+G+ + +TWN+I+A A
Sbjct: 583 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANA 642
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+G E L + +M +S + + + S L A A L VL G+ +H +K+ E
Sbjct: 643 HHGHGEEVLKLVSKM-RSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDC 701
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+ + DMY KCG++ K +++ SW +I+ G H E + F++M++
Sbjct: 702 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEM 761
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G++P ++TFVS+L+ACSH GLV +G + + + +F +EP +EH C++DLLGR+G+L E
Sbjct: 762 GIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAE 821
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A I M +K + +VW SLL +C+IH+++D G AA+ L +LEP + VL SN++A
Sbjct: 822 AETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFAT 881
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
GRWEDVE R M + + K S V+L+ KV +F +GD+ HPQ +IY LE++
Sbjct: 882 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKL 941
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++E GYV D + + D D+E+KE L HSE+LA NLR+C DC
Sbjct: 942 IKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDC 1001
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H+V + +S+V+ R IV+RD RFH+F+ GLCSC DYW
Sbjct: 1002 HSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 252/494 (51%), Gaps = 24/494 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K +N V SWN++++ + R G +E + F M L + P+ + +C
Sbjct: 115 LFDKMPVRNEV-SWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSG 173
Query: 88 DL-HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ G Q H G DV+VS+A++ +Y G +S +RK+F+E+P R N+VSWTS
Sbjct: 174 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR--NVVSWTS 231
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ GY E + ++K E EC +ENS ++ V+S+C + +
Sbjct: 232 LMVGYSDKGEPEEVIDIYKSMRGEGVEC---NENS---------MSLVISSCGLLKDESL 279
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
G VIK G +S++ V N+LI + G+VD + +F+ + E+D ++WNSI+A YAQ
Sbjct: 280 GRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQ 339
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG E+ +F+ M + D + N+ T+S +L + + + G+ IH V+KM + V
Sbjct: 340 NGHIEESSRIFNLMRRFHD-EVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVC 398
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V +++ MY G+ + A F QM K++ SW +++A + R+ +AL + MI+ G
Sbjct: 399 VCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTG 458
Query: 387 VRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
NY+TF S L+AC +G H L + F+ + +V + G+ G +
Sbjct: 459 KSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQI---IGNALVSMYGKIGGMS 515
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
+ ++ M + D V W +L+G +++ D +AA + +E + Y ++S + A
Sbjct: 516 TSRRVLLQMP-RRDVVAWNALIGGYAENEDPDKA-LAAFQTLRVEGVSANYITVVSVLSA 573
Query: 505 NAGRWEDVERTRSL 518
+ +ER + L
Sbjct: 574 CLVPGDLLERGKPL 587
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 142/535 (26%), Positives = 242/535 (45%), Gaps = 64/535 (11%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ +++ + SWNS++A A+ G E+ R F+ MR+ +T + +
Sbjct: 318 IFNQISERDTI-SWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVD 376
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H GF V V + L+ MY+ G +A +F ++P ++++SW S+
Sbjct: 377 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPT--KDLISWNSL 434
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ +V + + +AL + + G S V+ V S L+AC
Sbjct: 435 MASFVNDGRSLDALGILCSMIRT-----GKS-------VNYVTFTSALAACFSPEFFDKG 482
Query: 208 EGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
HG V+ G FD+++ +GN L+ Y + G + SR+V M +D V WN++I YA+
Sbjct: 483 RILHGLVVVSGLFDNQI-IGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAE 541
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG-VLRLGKCIHDQVIKMDLEESV 325
N +AL F Q ++ V N +T+ +VL A G +L GK +H ++ E
Sbjct: 542 NEDPDKALAAF-QTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDE 600
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V S+I MY KCG + ++ FN + +++ +W A++A H E L L KM
Sbjct: 601 HVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSF 660
Query: 386 GVRPNYITFVSVLSACSHAGLVQEG--WHWLNT-MGHEFN-------------------- 422
G+ + +F LSA + +++EG H L +G E +
Sbjct: 661 GLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEV 720
Query: 423 ---IEPGVEH----YGCMVDLLGRAGKLKEA----YDLIEGMKVKADFVVWGSLLGACRI 471
+ P V + ++ LGR G +E ++++E M +K V + SLL AC
Sbjct: 721 VKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLE-MGIKPGHVTFVSLLTACSH 779
Query: 472 HKNVDLG----EIAAKKLFELEP--NNCGYHVLLSNIYANAGRWEDVERTRSLMK 520
VD G ++ AK F LEP +C + + ++ +GR + E S M
Sbjct: 780 GGLVDQGLAYYDMIAKD-FGLEPAIEHC---ICVIDLLGRSGRLAEAETFISKMP 830
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 184/367 (50%), Gaps = 28/367 (7%)
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
V ++ LI+MY+K G + AR LFD++P +RN VSW +M++G V+ E + EF
Sbjct: 93 VLHTNTLINMYTKFGRVKPARYLFDKMP--VRNEVSWNTMMSGIVRVGLYLEGM----EF 146
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGV 225
+ + G + S IAS+++AC R + + EG HGFV K G S+V V
Sbjct: 147 FQKMCDLG--------IKPSSFVIASLVTACGR-SGSMFREGVQVHGFVAKSGLLSDVYV 197
Query: 226 GNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD 285
++ Y G V SRKVF+ M +++ V+W S++ Y+ G E +D++ M +
Sbjct: 198 STAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSM-RGEG 256
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
V+CN ++S V+ + L LG+ I QVIK LE + V S+I M+ G VD A
Sbjct: 257 VECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYAN 316
Query: 346 KAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
FNQ+ E++ SW +++A Y + E+ +F M + N T ++LS
Sbjct: 317 YIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDV- 375
Query: 406 LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR----AGKLKEAYDLIEGMKVKADFVV 461
+ W + H ++ G + C+ + L R AG+ +EA DL+ D +
Sbjct: 376 ---DHQKWGRGI-HGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEA-DLVFKQMPTKDLIS 430
Query: 462 WGSLLGA 468
W SL+ +
Sbjct: 431 WNSLMAS 437
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 132/273 (48%), Gaps = 8/273 (2%)
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
S++T H +K V NTLI+ Y + G V +R +FD M ++ V+WN
Sbjct: 69 SQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWN 128
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG-VLRLGKCIHDQVI 317
++++ + GL E ++ F +M +K ++ +++++ A G + R G +H V
Sbjct: 129 TMMSGIVRVGLYLEGMEFFQKMC-DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVA 187
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
K L V V T+I+ +Y G V +RK F +M ++NV SWT+++ GY E +D
Sbjct: 188 KSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVID 247
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH--EFNIEPGVEHYGCMVD 435
++ M GV N + V+S+C GL+++ +G + +E + ++
Sbjct: 248 IYKSMRGEGVECNENSMSLVISSC---GLLKDESLGRQIIGQVIKSGLESKLAVENSLIS 304
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ G G + A + I + D + W S++ A
Sbjct: 305 MFGNMGNVDYA-NYIFNQISERDTISWNSIVAA 336
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/598 (39%), Positives = 346/598 (57%), Gaps = 45/598 (7%)
Query: 72 TRSTFPCAI-KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS---KCGELSDA 127
+ +T P ++ C++L +L KQ A H D+ V + I+ S + A
Sbjct: 18 SNTTHPLSLLPKCTSLREL---KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHA 74
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
LFD+IPQ +IV + +M GY + D A LF + L +F D
Sbjct: 75 HHLFDQIPQP--DIVLFNTMARGYARTDTPLRAFTLFTQILFS------------GLFPD 120
Query: 188 SVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
S+L AC+ + + EG H IK G V V TLI+ Y +D +R+V
Sbjct: 121 DYTFPSLLKACA--SCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRV 178
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD + E VT+N++I YA+ EAL +F ++ ++ ++K VT+ +VL + A LG
Sbjct: 179 FDKIWEPCVVTYNAMITGYARGSRPNEALSLFREL-QARNLKPTDVTMLSVLSSCALLGA 237
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L LGK +H+ V K V V T++IDMY KCG +D A F M ++ ++W+AMI
Sbjct: 238 LDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMA 297
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y +H +A+ LF +M KAG P+ ITF+ +L ACSH GLV+EG+ + M ++ + P
Sbjct: 298 YAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIP 357
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
G++HYGCMVDLLGRAG+L+EAY+ I G+ ++ ++W +LL AC H NV+LG+ +++
Sbjct: 358 GIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQI 417
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
FEL+ ++ G +++LSN+ A AGRWEDV R LM R + K PG S VE+ VH F G
Sbjct: 418 FELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSG 477
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIH-DVDQEEKEMTLRIHSEKLA----- 599
D H K+++ L+EL +L+ VGYV + + V H D++ EEKE+TLR HSEKLA
Sbjct: 478 DGVHSVSTKLHQALDELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGL 537
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH+ +LIS + DR+I++RD +RFH+FKDG CSC DYW
Sbjct: 538 LNTPPGTTIRVVKNLRVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 181/383 (47%), Gaps = 49/383 (12%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + + ++ +N++ AR + A F+ + L P TFP +K+C++
Sbjct: 77 LFDQ-IPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCK 135
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+Q H A G +V+V LI+MY+ C E+ AR++FD+I + +V++ +M
Sbjct: 136 ALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPC--VVTYNAM 193
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+TGY + EAL LF+E + N+ V + SVLS+C+ + +
Sbjct: 194 ITGYARGSRPNEALSLFREL------------QARNLKPTDVTMLSVLSSCALLGALDLG 241
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H +V K GF+ V V LID YA+ G +D + VF+ M +D W+++I YA +
Sbjct: 242 KWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIH 301
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G +A+ +F +M K+ + + +T +L A +H G++ G + M + VI
Sbjct: 302 GHGLKAVSLFKEMRKA-GTEPDEITFLGLLYACSHTGLVEEG---FEYFYGMRDKYGVIP 357
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G ++ + M+ G R EA + ++ +
Sbjct: 358 G---------------------------IKHYGCMVDLLGRAGRLEEAYEF---IVGLPI 387
Query: 388 RPNYITFVSVLSACSHAGLVQEG 410
RP I + ++LSAC G V+ G
Sbjct: 388 RPTPILWRTLLSACGSHGNVELG 410
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 20/252 (7%)
Query: 38 VFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ 97
V ++N++I ARG EAL F ++ +L PT T + SC+ L L GK H+
Sbjct: 187 VVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHE 246
Query: 98 QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA 157
GF+R V V +ALIDMY+KCG L DA +F+ + +R+ +W++M+ Y + +
Sbjct: 247 YVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENM--AVRDTQAWSAMIMAYAIHGHG 304
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG---AHGFV 214
+A+ LFKE +E D + +L ACS + V EG +G
Sbjct: 305 LKAVSLFKEMRKAGTE------------PDEITFLGLLYACSHTGL--VEEGFEYFYGMR 350
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAEA 273
K G + ++D R G ++ + + G+ I + W ++++ +G
Sbjct: 351 DKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELG 410
Query: 274 LDVFDQMVKSTD 285
V +Q+ + D
Sbjct: 411 KRVIEQIFELDD 422
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/558 (38%), Positives = 336/558 (60%), Gaps = 32/558 (5%)
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
+ D F+ L+ MY K G DA++LFDE+P + ++VSW S+++G L F
Sbjct: 94 YSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK--DLVSWNSLMSGLSGRGYLGACLNAF 151
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
E G N V + SV+SAC+ + + HG V+K G +
Sbjct: 152 CRMRTES----GRQPNE-------VTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAK 200
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
V N+LI+ Y + G +D + ++F+ M + V+WNS++ I+ NG A + +D+F+ M K
Sbjct: 201 VVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLM-KRA 259
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+ + T+ A+L A G+ R + IH + + +I+ T+++++Y K G+++ +
Sbjct: 260 GINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNAS 319
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
F ++K+++ +WTAM+AGY +H REA+ LF M+K GV +++TF +LSACSH+
Sbjct: 320 EDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHS 379
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGS 464
GLV+EG + M + +EP ++HY CMVDLLGR+G+L++AY+LI+ M ++ VWG+
Sbjct: 380 GLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGA 439
Query: 465 LLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRL 524
LLGACR++ NV+LG+ A++L L+P++ +++LSNIY+ AG W D + R+LMK RRL
Sbjct: 440 LLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRL 499
Query: 525 AKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQ 584
+ PG S +E K+H F+VGD+ HP+ ++I+ LEEL K++E G V+HD+D+
Sbjct: 500 TRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDE 559
Query: 585 EEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRD 626
E K + HSEKLA NLR+CGDCH+ + S + R I++RD
Sbjct: 560 EVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRD 619
Query: 627 SKRFHYFKDGLCSCGDYW 644
SKRFH+F DGLCSC DYW
Sbjct: 620 SKRFHHFADGLCSCRDYW 637
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 199/403 (49%), Gaps = 30/403 (7%)
Query: 12 VVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LT 70
+VS K + + LF++ +K+ V SWNS+++ L+ G L AF MR S
Sbjct: 103 LVSMYFKLGYDEDAQRLFDEMPNKDLV-SWNSLMSGLSGRGYLGACLNAFCRMRTESGRQ 161
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P T + +C+ + L GK H G V ++LI+MY K G L A +L
Sbjct: 162 PNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQL 221
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F+E+P +R++VSW SM+ + N A + + LF L++ + + D
Sbjct: 222 FEEMP--VRSLVSWNSMVVIHNHNGYAEKGMDLFN--LMKRA----------GINPDQAT 267
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+ ++L AC+ + E H ++ + GF++++ + L++ YA+ G ++ S +F+ +
Sbjct: 268 MVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK 327
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
++D + W +++A YA + EA+ +FD MVK V+ + VT + +L A +H G++ GK
Sbjct: 328 DRDRIAWTAMLAGYAVHACGREAIKLFDLMVKE-GVEVDHVTFTHLLSACSHSGLVEEGK 386
Query: 311 C---IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAG- 365
I +V + +E + + ++D+ + G+++ A + M E + W A++
Sbjct: 387 KYFEIMSEVYR--VEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGAC 444
Query: 366 --YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
YG +E + + + R NYI ++ SA AGL
Sbjct: 445 RVYGNVELGKEVAEQLLSLDPSDHR-NYIMLSNIYSA---AGL 483
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 157/315 (49%), Gaps = 2/315 (0%)
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
+ LL K F+ + C F + S++ A S T H VIK
Sbjct: 32 KYPFLLCKFFISKRRICNANLFQLSPPFQVYSIVQSLVFAISSCTSVSYCSAIHARVIKS 91
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
S+ +G+ L+ Y + G+ + ++++FD M KD V+WNS+++ + G L+ F
Sbjct: 92 LNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAF 151
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
+M + + N VTL +V+ A A +G L GK +H V+K+ + V S+I+MY K
Sbjct: 152 CRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGK 211
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
G +D A + F +M +++ SW +M+ + + A + +DLF M +AG+ P+ T V++
Sbjct: 212 LGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVAL 271
Query: 398 LSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
L AC+ GL ++ ++ H + +++L + G+L + D+ E +K +
Sbjct: 272 LRACTDTGLGRQA-ESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR- 329
Query: 458 DFVVWGSLLGACRIH 472
D + W ++L +H
Sbjct: 330 DRIAWTAMLAGYAVH 344
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 131/265 (49%), Gaps = 27/265 (10%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
K+ V+S+++ K + LF + + ++ SWNS++ G + + + F+ M
Sbjct: 198 KAKVVNSLINMYGKLGFLDAASQLFEE-MPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLM 256
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ-QAFIF--GFHRDVFVSSALIDMYSKC 121
++ + P ++T +++C+ D G+QA A+I GF+ D+ +++AL+++Y+K
Sbjct: 257 KRAGINPDQATMVALLRACT---DTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL 313
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G L+ + +F+EI R R ++WT+ML GY + REA+ LF + E E
Sbjct: 314 GRLNASEDIFEEIKDRDR--IAWTAMLAGYAVHACGREAIKLFDLMVKEGVE-------- 363
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG---FDSEVGVGNTLIDAYARGGH 238
VD V +LSACS + V EG F I + + + ++D R G
Sbjct: 364 ----VDHVTFTHLLSACSHSGL--VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGR 417
Query: 239 VDVSRKVFDGM-IEKDAVTWNSIIA 262
++ + ++ M +E + W +++
Sbjct: 418 LEDAYELIKSMPMEPSSGVWGALLG 442
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/600 (39%), Positives = 341/600 (56%), Gaps = 35/600 (5%)
Query: 67 LSLTPT---RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
LS P+ S + ++SC + G+Q H + + G D +++ L+D+Y+ CG
Sbjct: 59 LSPCPSPYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGH 118
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+S AR++FDE+P + N+ W ++ Y ++ A+ L++ L S
Sbjct: 119 VSLARRVFDEMPNQ-GNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGS----------- 166
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ D+ VL AC+ + H V++ + ++V V LID YA+ G +D +
Sbjct: 167 MKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAW 226
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VF+ +DA WNS+IA QNG AEAL + M + + TL + + A A
Sbjct: 227 AVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNMA-AEGIAPTIATLVSAISAAAVA 285
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L G+ +H + + TS++DMY K G V +A F Q+ + + SW AMI
Sbjct: 286 SALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMI 345
Query: 364 AGYGMHCRAREALDLFYKM-IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
G+GMH A A +LF +M +A V P++ITFV VLSAC+H G+VQE + M ++
Sbjct: 346 CGFGMHGHADHAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYS 405
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
I+P V+HY C+VD+LG +G+ KEA D+I+GM VK D +WG+LL C+IHKNV+L E+A
Sbjct: 406 IKPTVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELAL 465
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
+KL ELEP + G +VLLSNIYA +G+WE+ R R LM NR L K S +EL+GK H F
Sbjct: 466 QKLIELEPEDAGNYVLLSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGF 525
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
LVGD HP+ + IYE LE L + + GYV D T V H+V+ +EK + HSE+LA
Sbjct: 526 LVGDASHPRSDDIYEELERLEGLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAF 585
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH VI+LIS++ REI++RD R+H+F +G CSC D+W
Sbjct: 586 GLISTPPRTKLLVTKNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 172/345 (49%), Gaps = 17/345 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-SLTPTRSTFPCAIKSCSAL 86
+F++ ++ NVF WN +I AR G A+ + +M S+ P T+P +K+C+AL
Sbjct: 125 VFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAAL 184
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
DL +G++ H + + DVFV + LIDMY+KCG + +A +F++ IR+ W S
Sbjct: 185 LDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFND--TTIRDAAVWNS 242
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ QN EAL L C + + ++ A +A + G
Sbjct: 243 MIAACGQNGRPAEALTL----------CRNMAAEGIAPTIATLVSAISAAAVASALPRG- 291
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
HG+ +RGF S+ + +L+D YA+ G V V+ +F+ ++ ++ ++WN++I +
Sbjct: 292 -RELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGM 350
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESV 325
+G A A ++F +M V + +T VL A H G+++ K + D ++ + ++ +V
Sbjct: 351 HGHADHAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTV 410
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMH 369
T ++D+ G+ A M K + W A++ G +H
Sbjct: 411 QHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIH 455
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/599 (38%), Positives = 346/599 (57%), Gaps = 32/599 (5%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
MR P + TF + + +A + G+Q H GF ++FV +AL+DMY+KC +
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ A ++FD++P+R N+VSW SM+ G+ N+ A+ +FK+ L E++
Sbjct: 61 MHSAVRVFDQMPER--NLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKT----------- 107
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V + V+++SVLSAC+ + HG V+K G V N+L+D Y + D
Sbjct: 108 VIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGV 167
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
K+F + ++D VTWN ++ + QN EA + F +++ + + + S VL + A L
Sbjct: 168 KLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYF-WVMRREGILPDEASFSTVLHSSASL 226
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L G IHDQ+IK+ +++ + S+I MY KCG + A + F +++ NV SWTAMI
Sbjct: 227 AALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMI 286
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
+ Y +H A + ++LF M+ G+ P+++TFV VLSACSH G V+EG N+M ++
Sbjct: 287 SAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDM 346
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
PG EHY CMVDLLGRAG L EA IE M +K VWG+LLGACR + N+ +G AA+
Sbjct: 347 NPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAE 406
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
+LFE+EP N G +VLL+N+ +GR E+ R LM + K PG S ++++ F
Sbjct: 407 RLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFT 466
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
D+ H ++IY+ LE+L +++ GYV + V + +++ E+E L HSEKLA
Sbjct: 467 AHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFG 526
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR CG CHTV++L SK+ DREI+VRD RFH F DG CSCGDYW
Sbjct: 527 LLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 187/402 (46%), Gaps = 28/402 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSS-MRKLSLTPTRSTFPCAIKSCSALHDLHS 91
+ + N+ SWNS+I A+ F +R+ ++ P + + +C+ + L+
Sbjct: 71 MPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNF 130
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+Q H FG +V ++L+DMY KC + KLF + R++V+W ++ G+
Sbjct: 131 GRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGD--RDVVTWNVLVMGF 188
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
VQND EA F E + D + ++VL + + + H
Sbjct: 189 VQNDKFEEACNYFWVMRRE------------GILPDEASFSTVLHSSASLAALHQGTAIH 236
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+IK G+ + + +LI YA+ G + + +VF+G+ + + ++W ++I+ Y +G A
Sbjct: 237 DQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCAN 296
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTS 330
+ +++F+ M+ S ++ + VT VL A +H G + G + + K+ D+
Sbjct: 297 QVIELFEHML-SEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYAC 355
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAG---YGMHCRAREALDLFYKMIKAG 386
++D+ + G +D A++ M K S W A++ YG REA + ++M
Sbjct: 356 MVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEM---- 411
Query: 387 VRP-NYITFVSVLSACSHAGLVQEGWHWLNTMG-HEFNIEPG 426
P N +V + + C+ +G ++E MG + EPG
Sbjct: 412 -EPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPG 452
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/593 (39%), Positives = 346/593 (58%), Gaps = 45/593 (7%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+ CS L GKQ H GF V +++IDMYSKCG + +A ++F+ +P +R
Sbjct: 11 LNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLP--VR 68
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N++SW +M+ GY N EAL LF+E + E+ E D +S L ACS
Sbjct: 69 NVISWNAMIAGYTNERNGEEALNLFRE-MREKGEVP-----------DGYTYSSSLKACS 116
Query: 200 RVTVNGVTEGAHGFVIKRGFD--SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
G H +I+ GF ++ V L+D Y + + +RKVFD + EK ++W
Sbjct: 117 CADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSW 176
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
+++I YAQ EA+D+F ++ +S + + LS+++ A +L GK +H I
Sbjct: 177 STLILGYAQEDNLKEAMDLFRELRESRH-RMDGFVLSSIIGVFADFALLEQGKQMHAYTI 235
Query: 318 KMD---LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
K+ LE SV S++DMY KCG A F +M E+NV SWT MI GYG H +
Sbjct: 236 KVPYGLLEMSV--ANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNK 293
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
A++LF +M + G+ P+ +T+++VLSACSH+GL++EG + + + I+P VEHY CMV
Sbjct: 294 AVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMV 353
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCG 494
DLLGR G+LKEA +LIE M +K + +W +LL CR+H +V++G+ + L E NN
Sbjct: 354 DLLGRGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPA 413
Query: 495 YHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEK 554
+V++SN+YA+AG W++ E+ R +K + L K G S VE+ ++H F GD HP E+
Sbjct: 414 NYVMVSNMYAHAGYWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEE 473
Query: 555 IYEYLEELNVKL-QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------- 599
I+E L+E+ ++ +E+GYV + +HDV++E K +LR+HSEKLA
Sbjct: 474 IHEVLKEMEKRVKEEMGYVHSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKG 533
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH I+ +SKV+ VVRD+ RFH F++GLCSCGDYW
Sbjct: 534 ERVIRIFKNLRVCGDCHAFIKGLSKVLKIAFVVRDANRFHRFENGLCSCGDYW 586
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 127/227 (55%), Gaps = 5/227 (2%)
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
+S + +L+ CS+ + + HG V K GFD VGN++ID Y++ G V + +VF
Sbjct: 3 ESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVF 62
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ + ++ ++WN++IA Y EAL++F +M + +V + T S+ L A +
Sbjct: 63 NTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVP-DGYTYSSSLKACSCADAA 121
Query: 307 RLGKCIHDQVIKMD---LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G IH +I+ L +S + G +++D+Y KC ++ ARK F++++EK+V SW+ +I
Sbjct: 122 GEGMQIHAALIRHGFPYLAQSAVAG-ALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLI 180
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
GY +EA+DLF ++ ++ R + S++ + L+++G
Sbjct: 181 LGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQG 227
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
L+ +L + +L GK +H V K+ + +VG S+IDMY KCG V A + FN +
Sbjct: 7 LNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLP 66
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
+NV SW AMIAGY EAL+LF +M + G P+ T+ S L ACS A EG
Sbjct: 67 VRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQ 126
Query: 413 WLNTM-GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ H F G +VDL + ++ EA + + ++ K+ + W +L+
Sbjct: 127 IHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKS-VMSWSTLI 180
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 22/271 (8%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L++S+ ++V K +F++ +++ +V SW+++I A+ + EA+ F
Sbjct: 139 LAQSAVAGALVDLYVKCRRMAEARKVFDR-IEEKSVMSWSTLILGYAQEDNLKEAMDLFR 197
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFH-RDVFVSSALIDMYSKC 121
+R+ I + L GKQ H + ++ V+++++DMY KC
Sbjct: 198 ELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKC 257
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G +A LF E+ + RN+VSWT M+TGY ++ +A+ LF E
Sbjct: 258 GLTVEADALFREMLE--RNVVSWTVMITGYGKHGIGNKAVELFNEM------------QE 303
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI---KRGFDSEVGVGNTLIDAYARGGH 238
+ + DSV +VLSACS + + EG F I + +V ++D RGG
Sbjct: 304 NGIEPDSVTYLAVLSACSHSGL--IKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGR 361
Query: 239 VDVSRKVFDGMIEKDAV-TWNSIIAIYAQNG 268
+ ++ + + M K V W +++++ +G
Sbjct: 362 LKEAKNLIEKMPLKPNVGIWQTLLSVCRMHG 392
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/639 (34%), Positives = 361/639 (56%), Gaps = 36/639 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
L K + ++ SWNS++A G S++AL SM + TF A+ +C
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
G+ H + G + + +AL+ MY K GE+S++R++ ++P+R ++V+W
Sbjct: 375 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR--DVVAWN 432
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+++ GY ++++ +AL F+ +E G S N + + SVLSAC + +
Sbjct: 433 ALIGGYAEDEDPDKALAAFQTMRVE-----GVSSNY-------ITVVSVLSAC-LLPGDL 479
Query: 206 VTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ G H +++ GF+S+ V N+LI YA+ G + S+ +F+G+ ++ +TWN+++A
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 539
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
A +G E L + +M +S V + + S L A A L VL G+ +H +K+ E
Sbjct: 540 NAHHGHGEEVLKLVSKM-RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 598
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ + DMY KCG++ K +++ SW +I+ G H E F++M+
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ G++P ++TFVS+L+ACSH GLV +G + + + +F +EP +EH C++DLLGR+G+L
Sbjct: 659 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 718
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
EA I M +K + +VW SLL +C+IH N+D G AA+ L +LEP + +VL SN++
Sbjct: 719 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMF 778
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A GRWEDVE R M + + K S V+L+ KV +F +GD+ HPQ +IY LE++
Sbjct: 779 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIK 838
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
++E GYV D + + D D+E+KE L HSE+LA NLR+C
Sbjct: 839 KLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICS 898
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH+V + +S+V+ R IV+RD RFH+F+ GLCSC DYW
Sbjct: 899 DCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 147/495 (29%), Positives = 250/495 (50%), Gaps = 26/495 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +N V SWN++++ + R G +E + F M L + P+ + +C
Sbjct: 14 LFDIMPVRNEV-SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG 72
Query: 88 DL-HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ G Q H G DV+VS+A++ +Y G +S +RK+F+E+P R N+VSWTS
Sbjct: 73 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR--NVVSWTS 130
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ GY E + ++K E G +ENS ++ V+S+C + +
Sbjct: 131 LMVGYSDKGEPEEVIDIYKGM---RGEGVGCNENS---------MSLVISSCGLLKDESL 178
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
G V+K G +S++ V N+LI G+VD + +FD M E+D ++WNSI A YAQ
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG E+ +F M + D + N+ T+S +L + H+ + G+ IH V+KM + V
Sbjct: 239 NGHIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V +++ MY G+ A F QM K++ SW +++A + R+ +AL L MI +G
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357
Query: 387 VRPNYITFVSVLSACSHAGLVQEG--WHWLNTM-GHEFNIEPGVEHYGCMVDLLGRAGKL 443
NY+TF S L+AC ++G H L + G +N G +V + G+ G++
Sbjct: 358 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG----NALVSMYGKIGEM 413
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
E+ ++ M + D V W +L+G ++ D +AA + +E + Y ++S +
Sbjct: 414 SESRRVLLQMP-RRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLS 471
Query: 504 ANAGRWEDVERTRSL 518
A + +ER + L
Sbjct: 472 ACLLPGDLLERGKPL 486
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 204/452 (45%), Gaps = 31/452 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +++ + SWNS+ A A+ G E+ R FS MR+ +T + +
Sbjct: 217 IFDQMSERDTI-SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVD 275
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H GF V V + L+ MY+ G +A +F ++P ++++SW S+
Sbjct: 276 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT--KDLISWNSL 333
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ +V + + +AL L + S V+ V S L+AC T +
Sbjct: 334 MASFVNDGRSLDALGLLCSMI------------SSGKSVNYVTFTSALAAC--FTPDFFE 379
Query: 208 EG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+G HG V+ G +GN L+ Y + G + SR+V M +D V WN++I YA
Sbjct: 380 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 439
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG-VLRLGKCIHDQVIKMDLEES 324
++ +AL F Q ++ V N +T+ +VL A G +L GK +H ++ E
Sbjct: 440 EDEDPDKALAAF-QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 498
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V S+I MY KCG + ++ FN + +N+ +W AM+A H E L L KM
Sbjct: 499 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 558
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRA 440
GV + +F LSA + +++EG H ++ G EH + D+ +
Sbjct: 559 FGVSLDQFSFSEGLSAAAKLAVLEEGQQL-----HGLAVKLGFEHDSFIFNAAADMYSKC 613
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G++ E ++ V W L+ A H
Sbjct: 614 GEIGEVVKMLPP-SVNRSLPSWNILISALGRH 644
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 175/358 (48%), Gaps = 28/358 (7%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY+K G + AR LFD +P +RN VSW +M++G V+ E + F++ C
Sbjct: 1 MYTKFGRVKPARHLFDIMP--VRNEVSWNTMMSGIVRVGLYLEGMEFFRKM------CDL 52
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYA 234
+ S S IAS+++AC R + + EG HGFV K G S+V V ++ Y
Sbjct: 53 GIKPS------SFVIASLVTACGR-SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYG 105
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
G V SRKVF+ M +++ V+W S++ Y+ G E +D++ M + V CN ++S
Sbjct: 106 VYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM-RGEGVGCNENSMS 164
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
V+ + L LG+ I QV+K LE + V S+I M G VD A F+QM E+
Sbjct: 165 LVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER 224
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
+ SW ++ A Y + E+ +F M + N T ++LS H + W
Sbjct: 225 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV----DHQKWG 280
Query: 415 NTMGHEFNIEPGVEHYGCMVDLLGR----AGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ H ++ G + C+ + L R AG+ EA + + M K D + W SL+ +
Sbjct: 281 RGI-HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/634 (35%), Positives = 356/634 (56%), Gaps = 34/634 (5%)
Query: 29 FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD 88
F K + N+ S N++++ + R + P TF +K+C++ D
Sbjct: 147 FFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGD 206
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L+ GK H Q G + D + ++L+++Y+KCG + A K+F EIP+R ++VSWT+++
Sbjct: 207 LNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER--DVVSWTALI 264
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
TG+V + L +F + L E G + N S+L +CS ++ + +
Sbjct: 265 TGFVA-EGYGSGLRIFNQMLAE-----GFNPNM-------YTFISILRSCSSLSDVDLGK 311
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H ++K D VG L+D YA+ ++ + +F+ +I++D W I+A YAQ+G
Sbjct: 312 QVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDG 371
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
+A+ F QM + VK N TL++ L + + L G+ +H IK + V
Sbjct: 372 QGEKAVKCFIQMQRE-GVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVA 430
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
++++DMY KCG V+ A F+ + ++ SW +I GY H + +AL F M+ G
Sbjct: 431 SALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV 490
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+ +TF+ VLSACSH GL++EG N++ + I P +EHY CMVD+LGRAGK E
Sbjct: 491 PDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVES 550
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
IE MK+ ++ ++W ++LGAC++H N++ GE AA KLFELEP ++LLSN++A G
Sbjct: 551 FIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGM 610
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
W+DV R+LM R + K PG S VE+ G+VH FL D HP+ +I+ L++L+ KL
Sbjct: 611 WDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMS 670
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
VGY + V+H+V EK+ L HSE+LA NLR+CGDCH
Sbjct: 671 VGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDF 730
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
++ IS++ ++E+VVRD FH+FK+G CSC ++W
Sbjct: 731 MKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 213/431 (49%), Gaps = 18/431 (4%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
+V WN ++ EA++ F MR + + F I + ++L D H G+
Sbjct: 53 QDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESI 112
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H +GF D+ +S+A + MY K + + + F + I N+ S ++L+G+ +
Sbjct: 113 HACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAM--MIENLASRNNLLSGFCDTE 170
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+ + + L+E E N++ S+L C+ + HG VI
Sbjct: 171 TCDQGPRILIQLLVEGFE--------PNMY----TFISILKTCASKGDLNEGKAIHGQVI 218
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
K G + + + N+L++ YA+ G + + KVF + E+D V+W ++I + G + L
Sbjct: 219 KSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGS-GLR 277
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F+QM+ + N T ++L + + L + LGK +H Q++K L+ + VGT+++DMY
Sbjct: 278 IFNQML-AEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMY 336
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
K ++ A FN++ ++++ +WT ++AGY + +A+ F +M + GV+PN T
Sbjct: 337 AKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLA 396
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
S LS CS + G L++M + + +VD+ + G +++A + +G+ V
Sbjct: 397 SSLSGCSRIATLDSG-RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGL-V 454
Query: 456 KADFVVWGSLL 466
D V W +++
Sbjct: 455 SRDTVSWNTII 465
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 149/300 (49%), Gaps = 16/300 (5%)
Query: 103 GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
G D + S+L+++Y KC L AR++ +E+P I+++ W L+ +EA+
Sbjct: 19 GICPDSHLWSSLVNVYVKCESLQCARQVLEEMP--IQDVQQWNQKLSSANSPYPLQEAVQ 76
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE 222
LF +L+ + + ++ AS++SA + + N E H V K GF+S+
Sbjct: 77 LF--YLMRHTR----------IRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESD 124
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
+ + N + Y + V+ + F M+ ++ + N++++ + + + Q++
Sbjct: 125 ILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLV 184
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
+ N T ++L A G L GK IH QVIK + + S++++Y KCG +
Sbjct: 185 E-GFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSAN 243
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
A K F ++ E++V SWTA+I G+ L +F +M+ G PN TF+S+L +CS
Sbjct: 244 YACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCS 302
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%)
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
+VIK + + +S++++Y KC + AR+ +M ++V+ W ++ +E
Sbjct: 14 RVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQE 73
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
A+ LFY M +R N F S++SA + G
Sbjct: 74 AVQLFYLMRHTRIRLNQFIFASLISAAASLG 104
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/636 (36%), Positives = 367/636 (57%), Gaps = 36/636 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F + DK+ + SWNS+++ + EA+ F M + P + + + L
Sbjct: 321 VFREIGDKDYI-SWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLG 379
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L +G++ H A D+ +++ L+DMY KC + + ++FD + RI++ VSWT++
Sbjct: 380 RLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRM--RIKDHVSWTTI 437
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y Q+ EA+ F+ + + + VD + + S+L ACS + +
Sbjct: 438 IACYAQSSRYSEAIGKFR------------TAQKEGIKVDPMMMGSILEACSGLKSISLL 485
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H + I+ G + + N +ID Y G V + +F+ + +KD VTW S++ +A+N
Sbjct: 486 KQVHSYAIRNGLLDLI-LKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAEN 544
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL EA+ +F +M+ + ++ ++V L +L AIA L L GK IH +I+ V
Sbjct: 545 GLLHEAVALFGKMLNA-GIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAV 603
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+S++DMY CG ++ A K F++ K K+V WTAMI GMH ++A+ +F +M++ GV
Sbjct: 604 VSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGV 663
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P++++F+++L ACSH+ LV EG +L+ M ++ ++P EHY C+VDLLGR+G+ +EAY
Sbjct: 664 SPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAY 723
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I+ M ++ VVW +LLGACRIHKN +L IA KL ELEP+N G +VL+SN++A G
Sbjct: 724 KFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMG 783
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+W +V+ R+ M + L K P S +E+ VH F D H + I+ L E+ KL+
Sbjct: 784 KWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLR 843
Query: 568 EVG-YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
G YV D + V+HDV +EEK L HSE+LA NLRVCGDCH
Sbjct: 844 REGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCH 903
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+L+SK+ +REIVVRD+ RFH+F G CSCGD+W
Sbjct: 904 EFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 217/437 (49%), Gaps = 28/437 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRK----LSLTPTRSTFPCAIKSCSALHDLHSG 92
VFSWN++I G + EA+ + +MR P T +K+C A D G
Sbjct: 123 TVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCG 182
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H A G R V++AL+ MY+KCG L A ++F E + R++ SW S ++G V
Sbjct: 183 SEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVF-EWMRDGRDVASWNSAISGCV 241
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN EAL LF+ SD ++S VL C+ + H
Sbjct: 242 QNGMFLEALDLFRRM------------QSDGFSMNSYTTVGVLQVCAELAQLNHGRELHA 289
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++K G + + N L+ YAR G VD + +VF + +KD ++WNS+++ Y QN L AE
Sbjct: 290 ALLKCGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAE 348
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+D F +MV++ +A +S +L A+ HLG L G+ +H +K L+ + + +++
Sbjct: 349 AIDFFGEMVQNGFNPDHACIVS-LLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLM 407
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KC V+ + + F++M+ K+ SWT +IA Y R EA+ F K G++ + +
Sbjct: 408 DMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPM 467
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY---GCMVDLLGRAGKLKEAYDL 449
S+L ACS + L H + I G+ ++D+ G G++ A ++
Sbjct: 468 MMGSILEACSGLKSIS-----LLKQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYALNI 522
Query: 450 IEGMKVKADFVVWGSLL 466
E M K D V W S++
Sbjct: 523 FE-MLDKKDIVTWTSMV 538
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 242/478 (50%), Gaps = 29/478 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F D +V SWNS I+ + G +EAL F M+ + T ++ C+ L
Sbjct: 220 VFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELA 279
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L+ G++ H G ++ +AL+ MY++CG + A ++F EI ++ +SW SM
Sbjct: 280 QLNHGRELHAALLKCGTEFNI-QCNALLVMYARCGWVDSALRVFREIGD--KDYISWNSM 336
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV--TVNG 205
L+ YVQN EA+ F E + +N N D I S+LSA + +NG
Sbjct: 337 LSCYVQNRLYAEAIDFFGEMV----------QNGFN--PDHACIVSLLSAVGHLGRLING 384
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
H + +K+ DS++ + NTL+D Y + V+ S +VFD M KD V+W +IIA YA
Sbjct: 385 --REVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYA 442
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q+ +EA+ F + + +K + + + ++L A + L + L K +H I+ L + +
Sbjct: 443 QSSRYSEAIGKF-RTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLD-L 500
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
I+ IID+Y +CG+V A F + +K++ +WT+M+ + + EA+ LF KM+ A
Sbjct: 501 ILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNA 560
Query: 386 GVRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
G++P+ + V +L A + + +G H G +F +E V +VD+ G +
Sbjct: 561 GIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRG-KFPVEGAV--VSSLVDMYSGCGSM 617
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--LEPNNCGYHVLL 499
A + + K K D V+W +++ A +H + K++ E + P++ + LL
Sbjct: 618 NYALKVFDEAKCK-DVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALL 674
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 187/377 (49%), Gaps = 19/377 (5%)
Query: 40 SWNSVIADLARGGDSVEALR--AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ 97
S + + L + GD EALR A S R + PT + + + + G+Q H
Sbjct: 21 SAGASLRQLCKDGDLREALRQLAARSARGRAPPPT-DHYGWVLDLVAVRRAVSEGRQLHA 79
Query: 98 QAFIFGFHRD---VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
A G D F+++ L+ MY KCG L DA +LFD +P R + SW +++ + +
Sbjct: 80 HAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPAR--TVFSWNALIGACLSS 137
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
A EA+ +++ E G A D +ASVL AC HG
Sbjct: 138 GGAGEAVGVYRAMRASEPVAGAAP--------DGCTLASVLKACGAEGDGRCGSEVHGLA 189
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWNSIIAIYAQNGLAAEA 273
+K G D V N L+ YA+ G +D + +VF+ M + +D +WNS I+ QNG+ EA
Sbjct: 190 VKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEA 249
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
LD+F +M +S N+ T VL A L L G+ +H ++K E ++ +++
Sbjct: 250 LDLFRRM-QSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALLV 307
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY +CG VD A + F ++ +K+ SW +M++ Y + EA+D F +M++ G P++
Sbjct: 308 MYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHAC 367
Query: 394 FVSVLSACSHAGLVQEG 410
VS+LSA H G + G
Sbjct: 368 IVSLLSAVGHLGRLING 384
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 250/671 (37%), Positives = 379/671 (56%), Gaps = 47/671 (7%)
Query: 2 KLSKSSSVSSVVSNVDKHSTNTNL--TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
KL +++ + +V+ VD +S + +L L + +N SWN ++A A+ G A
Sbjct: 62 KLDRNTFLGNVL--VDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAAT 119
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
F M + P T A+ +C+A +L G++ ++ D V S+LI MY
Sbjct: 120 LFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYG 179
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
+C E+ +A + FD P++ ++V WT+M++ Y N AL L + LE + G +
Sbjct: 180 RCREIEEAERAFDRSPEK--DVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPT- 236
Query: 180 NSDNVFVDSVAIASVLSACSRVT--VNGVTEGAHGFVIKRGFD-SEVGVGNTLIDAYARG 236
S+L AC+ NGV I G D S V TL++ Y +
Sbjct: 237 -----------YVSLLDACASTMDLRNGVAFHQRAAAI--GLDRSSTVVAGTLVNLYGKC 283
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G VD +R+V D M + +V+W ++IA YAQNG AAEA+++F Q + + + +TL +V
Sbjct: 284 GRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLF-QCMDLEGAEPSDITLISV 342
Query: 297 LLAIAHLGVLRLGKCIHDQV-IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN--QMKE 353
+ + A LG L LGK IH ++ +S+++ ++I MY KCG ++LAR+ F ++
Sbjct: 343 VDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRT 402
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKM-IKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
++V +WTAMI Y + EA++LF +M I G PN +TF+SVL ACSH G +++ W
Sbjct: 403 RSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWE 462
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK-VKADFVVWGSLLGACRI 471
+MG +F + P +HY C+VDLLGRAG+L EA L+ K +AD V W + L AC++
Sbjct: 463 HFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQM 522
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFS 531
+ +++ + AAK++ ELEP N VLLSN+YA GR DV R R+ MK+ + K G S
Sbjct: 523 NGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRS 582
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTL 591
+E+ +VH F+V D HP+ +IY LE L+ +++E GYV D V+ DVD+E+K L
Sbjct: 583 WIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLL 642
Query: 592 RIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF 633
HSE+LA NLRVC DCH + IS++V R+I+VRD+ RFH+F
Sbjct: 643 GYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHF 702
Query: 634 KDGLCSCGDYW 644
KDG+CSCGDYW
Sbjct: 703 KDGVCSCGDYW 713
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 193/416 (46%), Gaps = 28/416 (6%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ H Q R+ F+ + L+D YSK G L A+ F I + N SW ++ Y
Sbjct: 52 RKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRIT--LHNAHSWNILMAAYA 109
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN + R A LF S V ++V +++ L AC+ + +
Sbjct: 110 QNGHPRGAATLFHWMC------------SQGVRPNAVTLSTALLACTAARNLALGRKLNE 157
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ + + V ++LI Y R ++ + + FD EKD V W ++I+ YA N +
Sbjct: 158 LIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSR 217
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ--VIKMDLEESVIVGTS 330
AL++ +M +K T ++L A A LR G H + I +D +V+ GT
Sbjct: 218 ALELVRRM-DLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGT- 275
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++++Y KCG+VD AR+ + M + SWTAMIA Y + A EA++LF M G P+
Sbjct: 276 LVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPS 335
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
IT +SV+ +C+ G + G + + + ++ + G+ G L+ A ++
Sbjct: 336 DITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVF 395
Query: 451 EGMKVKADFVV-WGSLLGACRIHKNVDLGEIAAKKLFEL------EPNNCGYHVLL 499
E + ++ VV W +++ R + +GE A + E+ EPN + +L
Sbjct: 396 ECVPLRTRSVVTWTAMI---RAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVL 448
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/667 (35%), Positives = 367/667 (55%), Gaps = 66/667 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-SLTPTRSTFPCAIKSCSAL 86
+F++ + + FS N ++ L+R + + + ++R + + R +FP +K+ S +
Sbjct: 76 VFSQIPNPHTHFS-NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKV 134
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ G + H A GF D F+ + LI MY+ C + DAR LFD++ + V+W
Sbjct: 135 SAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHP--DAVAWNM 192
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ GY QN + +AL LF++ S ++ DSV + +VLSAC
Sbjct: 193 IIDGYCQNGHYDDALRLFEDM------------RSSDMKPDSVILCTVLSACGHAGNLSY 240
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG------------------ 248
H FV G+ + + LI+ YA G +D++RK++DG
Sbjct: 241 GRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAK 300
Query: 249 -------------MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
MIE+D V W+++I+ YA++ EAL +FD+M++ V + +T+ +
Sbjct: 301 LGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVP-DQITMLS 359
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
V+ A +H+G L IH V + ++ V ++IDMY KCG + AR+ F M KN
Sbjct: 360 VISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKN 419
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
V SW++MI + MH A A+ LF +M + + PN +TF+ VL AC HAGLV+EG +
Sbjct: 420 VISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFS 479
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
+M +E I P EHYGCMVDL RA L++A +LIE M + ++WGSL+ AC++H
Sbjct: 480 SMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEA 539
Query: 476 DLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVEL 535
+LGE AAK+L ELEP++ G V+LSNIYA RW DV R M + ++K S +E+
Sbjct: 540 ELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEI 599
Query: 536 RGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHS 595
+VH F++ D+ H Q ++IYE L+E+ KL+ VGY + ++ D+++E+K+ + HS
Sbjct: 600 NNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHS 659
Query: 596 EKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGL 637
EKLA NLR+C DCH+ ++L+SKV EIVVRD RFH+ G+
Sbjct: 660 EKLAVCYGLISRRNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGI 719
Query: 638 CSCGDYW 644
CSC DYW
Sbjct: 720 CSCRDYW 726
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/574 (39%), Positives = 332/574 (57%), Gaps = 41/574 (7%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
KQ H Q + + F +S L+ S G + A +F +I Q + +M+ G
Sbjct: 5 KQVHAQVLKW---ENSFCASNLVATCALSDWGSMDYACSIFRQIDQP--GTFEFNTMIRG 59
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
YV N AL L+ E L V D+ ++ AC+ ++ + EG
Sbjct: 60 YVNVMNMENALFLYYEML------------ERGVESDNFTYPALFKACA--SLRSIEEGM 105
Query: 211 --HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
HG++ KRG + ++ V N+LI+ Y + G +++S VF+ M +D +W++IIA +A G
Sbjct: 106 QIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLG 165
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
+ +E L VF +M + + L +VL A HLG L LG+C H +++ E +VIV
Sbjct: 166 MWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQ 225
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
TS+IDMY KCG ++ F +M +KN S++ MI G MH R EAL +F M++ G++
Sbjct: 226 TSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLK 285
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+ + ++ VLSAC+HAGLV EG N M E IEP ++HYGC+V L+GRAG L +A +
Sbjct: 286 PDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALE 345
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
I M +K + VVW LL AC+ H N+++GEIAAK L EL +N G +V+LSN+YA A R
Sbjct: 346 HIRSMPIKPNEVVWRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKR 405
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
WEDV + R+ M + +TPGFSLV++ K++ F+ D HPQ + +YE + ++ +L+
Sbjct: 406 WEDVAKIRTEMARKGFTQTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKF 465
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
GY D + V+ DVD+EEK L+ HS+KLA NLR+C DCHT
Sbjct: 466 EGYSPDTSQVLFDVDEEEKRQRLKAHSQKLAMAFALIHTSQGAPIRIARNLRMCNDCHTY 525
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LIS + REI VRD RFH+FKDG CSC DYW
Sbjct: 526 TKLISVIYQREITVRDRNRFHHFKDGTCSCRDYW 559
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 163/341 (47%), Gaps = 16/341 (4%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ +D+ F +N++I + AL + M + + T+P K+C++L +
Sbjct: 43 RQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIE 102
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G Q H F G D+FV ++LI+MY KCG++ + +F+ + + R++ SW++++
Sbjct: 103 EGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDR--RDVASWSAIIAA 160
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
+ E L +F E E G+ +++ V SVLSAC+ + +
Sbjct: 161 HASLGMWSECLSVFGEMSRE-----GSCRPEESILV------SVLSACTHLGALDLGRCT 209
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +++ + V V +LID Y + G ++ +F M++K+ ++++ +I A +G
Sbjct: 210 HVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRG 269
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGT 329
EAL VF M++ +K + V VL A H G++ G +C + ++ +E ++
Sbjct: 270 MEALQVFSDMLEE-GLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYG 328
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMH 369
I+ + + G ++ A + M K N W +++ H
Sbjct: 329 CIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFH 369
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 247/627 (39%), Positives = 345/627 (55%), Gaps = 43/627 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SWNS+I G+ A R F M + ++ + +K G+
Sbjct: 73 DVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKF---------GRVEL 123
Query: 97 QQAFIFGFH-RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
Q H +DV +A++ Y + G + + +LF+E+P +R+++SWTSM+ G N
Sbjct: 124 AQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMP--VRDVISWTSMIGGLDLNG 181
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+ EAL +FK+ L E ++ A VLSAC+ + HG V+
Sbjct: 182 KSEEALFVFKKMLRSGVEPTWST------------FACVLSACANAVEFNLGVQVHGHVV 229
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
K G + +LI YA ++ + K+F+ + K+ V W +++ Y N +AL
Sbjct: 230 KLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALR 289
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
VF M K + N T S L A L L GK IH IK+ LE V VG S++ MY
Sbjct: 290 VFGDMTKMGALP-NQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMY 348
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
+CG V+ A F + EK++ SW ++I G H AL F +MI+ GV PN ITF
Sbjct: 349 TECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFT 408
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
+LSACS +G++ +G + + + +HY CMVD+LGR GKL EA +L+ M V
Sbjct: 409 GLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPV 468
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
KA+ ++W +LL ACR+H N+++ E AAK + +LEPN +VLLSNIYA+AGRW DV R
Sbjct: 469 KANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRM 528
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
R MK L K PG S V LRGK H FL D+ HP E+IYE L+ L KL+E GYV D
Sbjct: 529 RVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQ 588
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
+HDV+ E+KE L HSE+LA NLRVCGDCH+VI+L+SK+
Sbjct: 589 KFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKI 648
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
V R+IVVRDS RFH+FK+G+CSC DYW
Sbjct: 649 VGRKIVVRDSGRFHHFKNGICSCSDYW 675
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 165/358 (46%), Gaps = 24/358 (6%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES----------- 172
L AR +FD+IP N+ +T M+ GY +ND +AL LF + +
Sbjct: 28 LDQARLIFDKIPSP--NLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCL 85
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF----DSEVGVGNT 228
+CG + D + +V+S + VNG + + +R F +V N
Sbjct: 86 DCGNLGMATR--LFDEMPEKNVISWTT--MVNGYLKFGRVELAQRLFLDMHVKDVAAWNA 141
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
++ Y G V+ ++F+ M +D ++W S+I NG + EAL VF +M++S V+
Sbjct: 142 MVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRS-GVEP 200
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
T + VL A A+ LG +H V+K+ + S+I Y C +++ A K F
Sbjct: 201 TWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIF 260
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
N+ KNV WTA++ Y + + ++AL +F M K G PN TF L AC +
Sbjct: 261 NETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALD 320
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+G ++TM + +E V +V + G + A + + K D V W S++
Sbjct: 321 KGKE-IHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEK-DIVSWNSII 376
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 105/209 (50%), Gaps = 40/209 (19%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
T + + + +D +R +FD + + + +IA Y +N +AL +FD+M V
Sbjct: 16 TTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRM----SV 71
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR- 345
+ + V+ ++++ G L + + D++ E++VI T++++ Y K G+V+LA+
Sbjct: 72 R-DVVSWNSMIKGCLDCGNLGMATRLFDEMP----EKNVISWTTMVNGYLKFGRVELAQR 126
Query: 346 ------------------------------KAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+ F +M ++V SWT+MI G ++ ++ EA
Sbjct: 127 LFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEA 186
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHA 404
L +F KM+++GV P + TF VLSAC++A
Sbjct: 187 LFVFKKMLRSGVEPTWSTFACVLSACANA 215
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 7/201 (3%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
N N + +++ ++ SWNS+I A+ G + AL F+ M + + P TF +
Sbjct: 353 NVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLS 412
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVS---SALIDMYSKCGELSDARKLFDEIPQRI 138
+CS L G+ + +I + +V + ++D+ +CG+L +A +L +P +
Sbjct: 413 ACSRSGMLLKGRCFFE--YISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKA 470
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
+++ W ++L+ + N A K L E C A N++ + A V
Sbjct: 471 NSMI-WLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMR 529
Query: 199 SRVTVNG-VTEGAHGFVIKRG 218
++ G V + +V+ RG
Sbjct: 530 VKMKQGGLVKQPGSSWVVLRG 550
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
T+ + + K ++D AR F+++ N+ +T MIAGY + R +AL LF +M VR
Sbjct: 16 TTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRM---SVR 72
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
+ +++ S++ C G + + M E V + MV+ + G+++ A
Sbjct: 73 -DVVSWNSMIKGCLDCGNLGMATRLFDEMP-----EKNVISWTTMVNGYLKFGRVELAQR 126
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEI-AAKKLFELEP 490
L M VK D W ++ +H + G + +LFE P
Sbjct: 127 LFLDMHVK-DVAAWNAM-----VHGYFENGRVEEGVRLFEEMP 163
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/553 (41%), Positives = 329/553 (59%), Gaps = 62/553 (11%)
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
+ W + L + + D+ +A+ LF + L E + + D + VL ACSR
Sbjct: 78 VTHWNTCLRSFAEGDSPADAISLF--YRLREFD----------ISPDHYTCSFVLKACSR 125
Query: 201 VTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN-- 258
+ + HG+V K G S + + N ++ YA G + V+RKVFD M ++D +TWN
Sbjct: 126 LLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIM 185
Query: 259 -----------------------------SIIAIYAQNGLAAEALDVFDQMVKSTDVKCN 289
S+I YAQ G + EA+D+F +M + + N
Sbjct: 186 IARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEM-EDAGLLPN 244
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
VT+ AVL+A A +G L LG+ IHD + E+++ V ++IDMY KCG ++ A + F+
Sbjct: 245 EVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFD 304
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
M+E+ V SW+AMIAG H RA +AL LF KMI GV+PN +TF+ +L ACSH G+V++
Sbjct: 305 NMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEK 364
Query: 410 GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G + +M ++ I P +EHYGCMVDL RAG L+EA++ I M + + VVWG+LLG C
Sbjct: 365 GRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGC 424
Query: 470 RIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPG 529
++HKN+ L E A + L +L+P N GY+V+LSNIYA AGRWEDV R R LM++R + KTPG
Sbjct: 425 KVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPG 484
Query: 530 FSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEM 589
+S + + G V+ F+ GD HPQ E+I++ E+L +++ GYV + + V+ D+++++KE
Sbjct: 485 WSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEK 544
Query: 590 TLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFH 631
L HSEKLA NLRVC DCH +++IS V REIVVRD RFH
Sbjct: 545 FLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFH 604
Query: 632 YFKDGLCSCGDYW 644
FK+G CSCGDYW
Sbjct: 605 CFKNGSCSCGDYW 617
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 196/398 (49%), Gaps = 50/398 (12%)
Query: 6 SSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR 65
SS S V++V +++ + L + +D + V WN+ + A G +A+ F +R
Sbjct: 46 SSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLR 105
Query: 66 KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
+ ++P T +K+CS L D+ +GK H G ++F+ + ++ +Y+ CGE+
Sbjct: 106 EFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIG 165
Query: 126 DARKLFDEIPQR-----------------------------IRNIVSWTSMLTGYVQNDN 156
ARK+FD++PQR RN+ SWTSM+ GY Q
Sbjct: 166 VARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGK 225
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
++EA+ LF LE + G + + V + +VL AC+ + + H F +
Sbjct: 226 SKEAIDLF----LEMEDAG--------LLPNEVTVVAVLVACADMGNLVLGRRIHDFSNR 273
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G++ + V NTLID Y + G ++ + ++FD M E+ V+W+++IA A +G A +AL +
Sbjct: 274 SGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALAL 333
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS----II 332
F++M+ +T VK NAVT +L A +H+G++ G+ M + ++ ++
Sbjct: 334 FNKMI-NTGVKPNAVTFIGILHACSHMGMVEKGR---KYFASMTRDYGIVPRIEHYGCMV 389
Query: 333 DMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
D++ + G + A + M N W A++ G +H
Sbjct: 390 DLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVH 427
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/434 (48%), Positives = 283/434 (65%), Gaps = 19/434 (4%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
+I YA+ G +D +R +FDG+ E+DA+ WN +I YAQ+GL E L +F QM+ + V+
Sbjct: 12 MITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNA-KVRP 70
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
N VT+ AVL A G L G+ +H + + +V VGTS+IDMY KCG ++ AR F
Sbjct: 71 NEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVF 130
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
++ K+V +W +M+ GY MH +++AL LF +M G +P ITF+ VL+ACSHAGLV
Sbjct: 131 ERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVS 190
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
EGW + +M E+ IEP VEHYGCMV+LLGRAG L+EAY+L++ M++ D V+WG+LLGA
Sbjct: 191 EGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGA 250
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
CR+H N+ LGE A+ L N G +VLLSNIYA AG WE V R R+LMK K P
Sbjct: 251 CRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEKEP 310
Query: 529 GFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKE 588
G S +E+ KVH FL GD HP+ +IYE LEE+N L+ GY V+HD++ +KE
Sbjct: 311 GCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVLHDLEDAQKE 370
Query: 589 MTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRF 630
+L +HSEKLA NLRVC DCH V +LISK+ R++V+RD RF
Sbjct: 371 RSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGRKVVMRDRNRF 430
Query: 631 HYFKDGLCSCGDYW 644
H+F +GLCSCGDYW
Sbjct: 431 HHFVNGLCSCGDYW 444
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 130/264 (49%), Gaps = 25/264 (9%)
Query: 112 SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
+A+I Y+K G + +AR LFD + +R + + W M+ GY Q+ E LLLF++ L
Sbjct: 10 TAMITCYAKYGMIDEARVLFDGLEER--DAICWNVMIDGYAQHGLPNEGLLLFRQML--- 64
Query: 172 SECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLID 231
+ V + V + +VLSAC + H ++ G V VG +LID
Sbjct: 65 ---------NAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLID 115
Query: 232 AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV----KSTDVK 287
Y++ G ++ +R VF+ + KD V WNS++ YA +G + +AL +F +M + TD
Sbjct: 116 MYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTD-- 173
Query: 288 CNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+T VL A +H G++ G K + + +E V ++++ + G ++ A +
Sbjct: 174 ---ITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYE 230
Query: 347 AFNQMK-EKNVRSWTAMIAGYGMH 369
M+ +++ W ++ +H
Sbjct: 231 LVKNMEIDQDPVLWGTLLGACRLH 254
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 21/259 (8%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S++++++ K+ LF+ +++ + WN +I A+ G E L F M
Sbjct: 8 SLTAMITCYAKYGMIDEARVLFDG-LEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNA 66
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
+ P T + +C L +G+ H G +V V ++LIDMYSKCG L DA
Sbjct: 67 KVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDA 126
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R +F+ I +++V+W SM+ GY + +++AL LFKE C + +D F+
Sbjct: 127 RLVFERISN--KDVVAWNSMVVGYAMHGFSQDALRLFKEM------CMIGYQPTDITFI- 177
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRK 244
VL+ACS + V+EG F + G + +V +++ R G+++ + +
Sbjct: 178 -----GVLNACSHAGL--VSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYE 230
Query: 245 VFDGM-IEKDAVTWNSIIA 262
+ M I++D V W +++
Sbjct: 231 LVKNMEIDQDPVLWGTLLG 249
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK 381
E+S++ T++I Y K G +D AR F+ ++E++ W MI GY H E L LF +
Sbjct: 3 EKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQ 62
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
M+ A VRPN +T ++VLSAC G ++ G W+++ I V ++D+ + G
Sbjct: 63 MLNAKVRPNEVTVLAVLSACGQTGALETG-RWVHSYIENNGIGINVRVGTSLIDMYSKCG 121
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
L++A + E + K D V W S++ +H
Sbjct: 122 SLEDARLVFERISNK-DVVAWNSMVVGYAMH 151
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/637 (35%), Positives = 361/637 (56%), Gaps = 36/637 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
L K + ++ SWNS++A G S++AL SM + TF A+ +C
Sbjct: 407 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 466
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H + G + + +AL+ MY K GE+S++R++ ++P+R ++V+W ++
Sbjct: 467 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR--DVVAWNAL 524
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY ++++ +AL F+ +E G S N + + SVLSAC + + +
Sbjct: 525 IGGYAEDEDPDKALAAFQTMRVE-----GVSSNY-------ITVVSVLSAC-LLPGDLLE 571
Query: 208 EGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
G H +++ GF+S+ V N+LI YA+ G + S+ +F+G+ ++ +TWN+++A A
Sbjct: 572 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 631
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+G E L + +M +S V + + S L A A L VL G+ +H +K+ E
Sbjct: 632 HHGHGEEVLKLVSKM-RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 690
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+ + DMY KCG++ K +++ SW +I+ G H E F++M++
Sbjct: 691 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 750
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G++P ++TFVS+L+ACSH GLV +G + + + +F +EP +EH C++DLLGR+G+L E
Sbjct: 751 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 810
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A I M +K + +VW SLL +C+IH N+D G AA+ L +LEP + +VL SN++A
Sbjct: 811 AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 870
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
GRWEDVE R M + + K S V+L+ KV +F +GD+ HPQ +IY LE++
Sbjct: 871 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKL 930
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++E GYV D + + D D+E+KE L HSE+LA NLR+C DC
Sbjct: 931 IKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDC 990
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H+V + +S+V+ R IV+RD RFH+F+ GLCSC DYW
Sbjct: 991 HSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/495 (28%), Positives = 239/495 (48%), Gaps = 51/495 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +N V SWN++++ + R G +E + F M L + P+ + +C
Sbjct: 129 LFDIMPVRNEV-SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG 187
Query: 88 DL-HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ G Q H G DV+VS+A++ +Y G +S +RK+F+E+P R N+VSWTS
Sbjct: 188 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR--NVVSWTS 245
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ GY E + ++K+ + R +
Sbjct: 246 LMVGYSDKGEPEEVIDIYKD-----------------------------ESLGRQII--- 273
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
G V+K G +S++ V N+LI G+VD + +FD M E+D ++WNSI A YAQ
Sbjct: 274 -----GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 328
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG E+ +F M + D + N+ T+S +L + H+ + G+ IH V+KM + V
Sbjct: 329 NGHIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 387
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V +++ MY G+ A F QM K++ SW +++A + R+ +AL L MI +G
Sbjct: 388 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 447
Query: 387 VRPNYITFVSVLSACSHAGLVQEG--WHWLNTM-GHEFNIEPGVEHYGCMVDLLGRAGKL 443
NY+TF S L+AC ++G H L + G +N G +V + G+ G++
Sbjct: 448 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG----NALVSMYGKIGEM 503
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
E+ ++ M + D V W +L+G ++ D +AA + +E + Y ++S +
Sbjct: 504 SESRRVLLQMP-RRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLS 561
Query: 504 ANAGRWEDVERTRSL 518
A + +ER + L
Sbjct: 562 ACLLPGDLLERGKPL 576
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 199/445 (44%), Gaps = 50/445 (11%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F + D+N V SW S++ + G+ E + +
Sbjct: 231 VFEEMPDRN-VVSWTSLMVGYSDKGEPEEVIDIYK------------------------- 264
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G+Q Q G + V ++LI M G + A +FD++ +R + +SW S+
Sbjct: 265 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER--DTISWNSI 322
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
Y QN + E+ +F E V+S ++++LS V
Sbjct: 323 AAAYAQNGHIEESFRIFSLMRRFHDE------------VNSTTVSTLLSVLGHVDHQKWG 370
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
G HG V+K GFDS V V NTL+ YA G + VF M KD ++WNS++A + +
Sbjct: 371 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVND 430
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G + +AL + M+ S+ N VT ++ L A G+ +H V+ L + I+
Sbjct: 431 GRSLDALGLLCSMI-SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 489
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G +++ MY K G++ +R+ QM ++V +W A+I GY +AL F M GV
Sbjct: 490 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 549
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKL 443
NYIT VSVLSAC G + E L H + + G E ++ + + G L
Sbjct: 550 SSNYITVVSVLSACLLPGDLLERGKPL----HAYIVSAGFESDEHVKNSLITMYAKCGDL 605
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGA 468
+ DL G+ + + + W ++L A
Sbjct: 606 SSSQDLFNGLDNR-NIITWNAMLAA 629
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 169/367 (46%), Gaps = 53/367 (14%)
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
V ++ LI+MY+K G + AR LFD +P +RN VSW +M++G V+ E + F++
Sbjct: 107 VLHTNTLINMYTKFGRVKPARHLFDIMP--VRNEVSWNTMMSGIVRVGLYLEGMEFFRKM 164
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGV 225
C + S S IAS+++AC R + + EG HGFV K G S+V V
Sbjct: 165 ------CDLGIKPS------SFVIASLVTACGR-SGSMFREGVQVHGFVAKSGLLSDVYV 211
Query: 226 GNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD 285
++ Y G V SRKVF+ M +++ V+W S++ Y+ G E +D++
Sbjct: 212 STAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDE----- 266
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
LG+ I QV+K LE + V S+I M G VD A
Sbjct: 267 ---------------------SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYAN 305
Query: 346 KAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
F+QM E++ SW ++ A Y + E+ +F M + N T ++LS H
Sbjct: 306 YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV- 364
Query: 406 LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR----AGKLKEAYDLIEGMKVKADFVV 461
+ W + H ++ G + C+ + L R AG+ EA + + M K D +
Sbjct: 365 ---DHQKWGRGI-HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLIS 419
Query: 462 WGSLLGA 468
W SL+ +
Sbjct: 420 WNSLMAS 426
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-----------IEKDAVTWNSIIAIY 264
K GF S + G T+ R G + VF G +DA N IA++
Sbjct: 3 KVGFKSLIFPGTTVEHRRIRAGQLATQSPVFSGRRFSFAQWICLPPVQDAT--NLDIAMF 60
Query: 265 AQNGLAA----EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
++G + FDQ + + + + G+ +H +K
Sbjct: 61 EKSGRKKNHWNPEISCFDQ------------------IGFSQITIETTGRAVHALCVKGL 102
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
+ SV+ ++I+MY K G+V AR F+ M +N SW M++G E ++ F
Sbjct: 103 VRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFR 162
Query: 381 KMIKAGVRPNYITFVSVLSACSHAG-LVQEG 410
KM G++P+ S+++AC +G + +EG
Sbjct: 163 KMCDLGIKPSSFVIASLVTACGRSGSMFREG 193
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/567 (40%), Positives = 324/567 (57%), Gaps = 62/567 (10%)
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
A+++F + ++ W S L + D+ +A++LF +V
Sbjct: 79 AQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRL------------RQYDVCP 126
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D+ +SVL AC + HG V K GF S + + N ++ YA G + +R +F
Sbjct: 127 DTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLF 186
Query: 247 DGMIEKDAVTWN-------------------------------SIIAIYAQNGLAAEALD 275
+ M ++D VTWN S+IA Y Q G A EA+
Sbjct: 187 EKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIH 246
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F +M + VKCN VT+ AVL A A LG L LG IH+ + + +V + ++IDMY
Sbjct: 247 LFAKM-EEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMY 305
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG ++ A K F +M+E+ V SW+AMI G MH RA EAL LF M + G+ PN +TF+
Sbjct: 306 VKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFI 365
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
+L ACSH GL+ EG + +M ++ I P +EHYGCMVDLL RAG L EA++ I M +
Sbjct: 366 GLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPM 425
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
K + VVWG+LLGACR+HKNV++ E A K L EL+P N GY+V+LSNIYA AGRWED R
Sbjct: 426 KPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARV 485
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
R MK+R++ KTPG+S + + G VH F+ G++ HP E+I++ EEL +++ GYV +
Sbjct: 486 RKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNT 545
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
+ V+ D+++ EK + HSEKLA NLR+C DCH+ +LIS +
Sbjct: 546 SVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAI 605
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
V+REIVVRD RFH F D CSC DYW
Sbjct: 606 VNREIVVRDRNRFHCFNDNSCSCRDYW 632
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 154/306 (50%), Gaps = 42/306 (13%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
K F WNS + LA G ++A+ F +R+ + P T +++C L DL +G+
Sbjct: 89 QKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGR 148
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR---------------- 137
H GF ++++ + ++ +Y+ CGE+ +AR LF+++PQR
Sbjct: 149 ILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQG 208
Query: 138 -------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
RN+ SWTSM+ GYVQ A+EA+ LF + +EE+ V
Sbjct: 209 DHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAK--MEEA----------GV 256
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
+ V + +VL+AC+ + + H + + GF V + NTLID Y + G ++ + K
Sbjct: 257 KCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACK 316
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VF+ M E+ V+W+++I A +G A EAL +F M ++ N VT +L A +H+G
Sbjct: 317 VFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDM-SQVGIEPNGVTFIGLLHACSHMG 375
Query: 305 VLRLGK 310
++ G+
Sbjct: 376 LISEGR 381
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+++ V SW+++I LA G + EALR FS M ++ + P TF + +CS H G
Sbjct: 321 MEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACS-----HMG 375
Query: 93 KQAHQQAFIFGFHRDVFVSS------ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ + F RD + ++D+ S+ G L +A + +P + +V W +
Sbjct: 376 LISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVV-WGA 434
Query: 147 ML 148
+L
Sbjct: 435 LL 436
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/632 (37%), Positives = 363/632 (57%), Gaps = 47/632 (7%)
Query: 43 SVIADLARGG---DSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK--QAHQ 97
S DL+ GG + E L FS M ++ P T ++CS L L G+ + +
Sbjct: 458 SGFGDLSVGGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKE 517
Query: 98 QAFIFGF--HRDV-----FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+ GF R + F+ AL+++Y+ G L D K+F+ I ++ I+SW ++++
Sbjct: 518 GRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEK--TILSWNTLISI 575
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
+ +N EALLLF + + + DS ++AS LSAC ++ + +
Sbjct: 576 FTRNGQPEEALLLFVQM------------QTQGLMPDSYSLASSLSACGTISFSQLGAQI 623
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG++IK G ++ V N LID YA+ G V + K+F+ + EK VTWNS+I ++QNG +
Sbjct: 624 HGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYS 682
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA+ +FDQM + VK + +T +V+ A +HLG L GK +H ++I L + + T+
Sbjct: 683 VEAITLFDQMYMNC-VKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTA 741
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+ DMY KCG++ +A F++M E+++ SW+ MIAGYGMH + + LF +M+ +G++PN
Sbjct: 742 LTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPN 801
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
ITF+ +LSACSHAG V+EG + N+M EF +EP +H+ CMVDLL RAG L AY +I
Sbjct: 802 DITFMHILSACSHAGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLNGAYQII 860
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
+ A+ +WG+LL CRIHK +D+ + K L +++ + GY+ LLSNIYA G W+
Sbjct: 861 TSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWD 920
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
+ RS+MK++ L K PG+S +E+ K++ F GD H Q + IY +LE +
Sbjct: 921 KFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQV 980
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
Y ++ + I + KE + HSEKLA NLRVC DCH+ +
Sbjct: 981 YDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAK 1040
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ SK+ REI++RD RFH F++G CSC DYW
Sbjct: 1041 IASKITGREIIMRDLNRFHCFRNGSCSCNDYW 1072
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 229/462 (49%), Gaps = 59/462 (12%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H FI G HR S+ LI+ Y++ G ++++FD P+ + W ++ YV
Sbjct: 366 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPK--PDSFMWGVLIKCYVW 423
Query: 154 NDNAREALLLFKEFLLEESE-------------CGG------------ASEN-------- 180
EA+ L+ E + ++ C G ASE
Sbjct: 424 GGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMI 483
Query: 181 SDNVFVDSVAIASVLSACSRV------TVNGVTEG--AHGFVIKRGFDSEVG-VGNTLID 231
S+ V DSV + SV ACS + + V EG HGFVI+R D E+ +G L++
Sbjct: 484 SEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALME 543
Query: 232 AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
YA G++ KVF+ + EK ++WN++I+I+ +NG EAL +F QM ++ + ++
Sbjct: 544 LYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQM-QTQGLMPDSY 602
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
+L++ L A + +LG IH +IK + V ++IDMY KCG V A K F ++
Sbjct: 603 SLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKI 661
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
KEK++ +W +MI G+ + + EA+ LF +M V+ + +TF+SV+ ACSH G +++G
Sbjct: 662 KEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKG- 720
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
W++ + + + D+ + G+L+ A+ + + M ++ V W ++ +
Sbjct: 721 KWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERS-IVSWSVMIAGYGM 779
Query: 472 HKNVDLGEIAAKKLFE------LEPNNCGY-HVLLSNIYANA 506
H ++ A LF ++PN+ + H+L + +A A
Sbjct: 780 HGQIN----ATISLFNQMLGSGIKPNDITFMHILSACSHAGA 817
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 168/347 (48%), Gaps = 21/347 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + SWN++I+ R G EAL F M+ L P + ++ +C + G
Sbjct: 561 IKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLG 620
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H G D FV +ALIDMY+KCG + A K+F++I + +++V+W SM+ G+
Sbjct: 621 AQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKE--KSLVTWNSMICGFS 677
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN + EA+ LF + + + V +D + SV+ ACS + + H
Sbjct: 678 QNGYSVEAITLFDQMYM------------NCVKMDKLTFLSVIQACSHLGYLEKGKWVHH 725
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+I G + + L D Y++ G + ++ VFD M E+ V+W+ +IA Y +G
Sbjct: 726 KLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINA 785
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
+ +F+QM+ S +K N +T +L A +H G + GK + + + +E ++
Sbjct: 786 TISLFNQMLGS-GIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMV 844
Query: 333 DMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
D+ + G ++ A + + N W A++ G CR + +D+
Sbjct: 845 DLLSRAGDLNGAYQIITSLPFPANSSIWGALLNG----CRIHKRIDI 887
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 120/246 (48%), Gaps = 24/246 (9%)
Query: 19 HSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC 78
HS N +F K +K+ V +WNS+I ++ G SVEA+ F M + + TF
Sbjct: 652 HSANK----MFEKIKEKSLV-TWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLS 706
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
I++CS L L GK H + ++G +D ++ +AL DMYSKCGEL A +FD + +
Sbjct: 707 VIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSE-- 764
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
R+IVSW+ M+ GY + + LF + L G + +D F+ +LSAC
Sbjct: 765 RSIVSWSVMIAGYGMHGQINATISLFNQML------GSGIKPNDITFMH------ILSAC 812
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAV 255
S V EG F F E + ++D +R G ++ + ++ + ++
Sbjct: 813 SH--AGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSS 870
Query: 256 TWNSII 261
W +++
Sbjct: 871 IWGALL 876
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 148/353 (41%), Gaps = 62/353 (17%)
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
L++ R + H + G LI++YA+ G + S++VFD + D+
Sbjct: 352 LTSHKRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDS 411
Query: 255 VTWNSIIAIY---------------------------------------------AQNGL 269
W +I Y +NG
Sbjct: 412 FMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQ 471
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL--------GKCIHDQVIKMDL 321
A+E LD+F QM+ S V+ ++VT+ +V A + LG LRL G+ +H VI+ +
Sbjct: 472 ASEGLDMFSQMI-SEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAM 530
Query: 322 EESV-IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
+ + +G +++++Y G + K F +KEK + SW +I+ + + + EAL LF
Sbjct: 531 DPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFV 590
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+M G+ P+ + S LSAC Q G + N V++ ++D+ +
Sbjct: 591 QMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKC 648
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
G + A + E +K K+ V W S++ C +N + A LF+ NC
Sbjct: 649 GFVHSANKMFEKIKEKS-LVTWNSMI--CGFSQNGY--SVEAITLFDQMYMNC 696
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/558 (38%), Positives = 333/558 (59%), Gaps = 32/558 (5%)
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
+ D F+ L+ MY K G DA++LFDE+P R ++VSW S+++G L F
Sbjct: 171 YSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNR--DLVSWNSLMSGLSGRGYLGACLNAF 228
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
E G N V + SV+SAC+ + + HG V+K G +
Sbjct: 229 CRMRTES----GRQPNE-------VTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAK 277
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
V N+LI+ Y + G +D + ++F+ M + V+WNS++ I+ NG A + +D+F+ M K
Sbjct: 278 VVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLM-KRA 336
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+ + T+ A+L A G+ R + IH + + +I+ T+++++Y K G+++ +
Sbjct: 337 GINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNAS 396
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
F ++K+++ +WTAM+AGY +H REA+ LF M+K GV +++TF +LSACSH+
Sbjct: 397 EDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHS 456
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGS 464
GLV+EG + M + +EP ++HY CMVDLLGR+G+L++AY+LI+ M ++ VWG+
Sbjct: 457 GLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGA 516
Query: 465 LLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRL 524
LLGACR++ NV+LG+ A++L L+P++ +++LSNIY+ AG W + R LMK RRL
Sbjct: 517 LLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRL 576
Query: 525 AKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQ 584
+ PG S +E K+H F+VGD+ HP+ ++I+ LEEL K+ E G V+HD+D+
Sbjct: 577 TRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDE 636
Query: 585 EEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRD 626
E K + HSEKLA NLR+CGDCH+ + S + R I++RD
Sbjct: 637 EVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRD 696
Query: 627 SKRFHYFKDGLCSCGDYW 644
SKRFH+F DGLCSC DYW
Sbjct: 697 SKRFHHFADGLCSCRDYW 714
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 199/401 (49%), Gaps = 26/401 (6%)
Query: 12 VVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LT 70
+VS K + + LF++ +++ V SWNS+++ L+ G L AF MR S
Sbjct: 180 LVSMYFKLGYDEDAQRLFDEMPNRDLV-SWNSLMSGLSGRGYLGACLNAFCRMRTESGRQ 238
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P T + +C+ + L GK H G V ++LI+MY K G L A +L
Sbjct: 239 PNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQL 298
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F+E+P +R++VSW SM+ + N A + + LF L++ + + D
Sbjct: 299 FEEMP--VRSLVSWNSMVVIHNHNGYAEKGMDLFN--LMKRA----------GINPDQAT 344
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+ ++L AC+ + E H ++ + GF++++ + L++ YA+ G ++ S +F+ +
Sbjct: 345 MVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK 404
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
++D + W +++A YA + EA+ +FD MVK V+ + VT + +L A +H G++ GK
Sbjct: 405 DRDTIAWTAMLAGYAVHACGREAIKLFDLMVKE-GVEVDHVTFTHLLSACSHSGLVEEGK 463
Query: 311 CIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAG--- 365
+ + ++ +E + + ++D+ + G+++ A + M E + W A++
Sbjct: 464 KYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRV 523
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
YG +E + + + R NYI ++ SA AGL
Sbjct: 524 YGNVELGKEVAEQLLSLDPSDHR-NYIMLSNIYSA---AGL 560
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 169/338 (50%), Gaps = 19/338 (5%)
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
P R + S+ + ND+ R + +F G NS ++ DS+ + S+
Sbjct: 103 PSRFGTLTSFPN-----SSNDSTRTKVAVFL----------GKLHNS-SLLADSI-VQSL 145
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
+ A S T H VIK S+ +G+ L+ Y + G+ + ++++FD M +D
Sbjct: 146 VFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDL 205
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
V+WNS+++ + G L+ F +M + + N VTL +V+ A A +G L GK +H
Sbjct: 206 VSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHG 265
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
V+K+ + V S+I+MY K G +D A + F +M +++ SW +M+ + + A +
Sbjct: 266 VVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEK 325
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
+DLF M +AG+ P+ T V++L AC+ GL ++ ++ H + ++
Sbjct: 326 GMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQA-ESIHAYIHRCGFNADIIIATALL 384
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+L + G+L + D+ E +K + D + W ++L +H
Sbjct: 385 NLYAKLGRLNASEDIFEEIKDR-DTIAWTAMLAGYAVH 421
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 132/265 (49%), Gaps = 27/265 (10%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
K+ V+S+++ K + LF + + ++ SWNS++ G + + + F+ M
Sbjct: 275 KAKVVNSLINMYGKLGFLDAASQLFEE-MPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLM 333
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ-QAFIF--GFHRDVFVSSALIDMYSKC 121
++ + P ++T +++C+ D G+QA A+I GF+ D+ +++AL+++Y+K
Sbjct: 334 KRAGINPDQATMVALLRACT---DTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL 390
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G L+ + +F+EI + R+ ++WT+ML GY + REA+ LF + E E
Sbjct: 391 GRLNASEDIFEEI--KDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVE-------- 440
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG---FDSEVGVGNTLIDAYARGGH 238
VD V +LSACS + V EG F I + + + ++D R G
Sbjct: 441 ----VDHVTFTHLLSACSHSGL--VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGR 494
Query: 239 VDVSRKVFDGM-IEKDAVTWNSIIA 262
++ + ++ M +E + W +++
Sbjct: 495 LEDAYELIKSMPMEPSSGVWGALLG 519
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/610 (37%), Positives = 360/610 (59%), Gaps = 50/610 (8%)
Query: 58 LRAFSSMRKLSLTPTRSTFPCA-IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
AFS++ L + C+ I C ALH + + GF D VSS
Sbjct: 31 FHAFSNVDSLVSALITAISTCSSISYCRALH----CRVIKSVNYNHGFIGDQLVSS---- 82
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL-LLFK---EFLLEES 172
Y + G DA +LFDE+P + ++VSW S+++G+ + + L LLF+ E L+ +
Sbjct: 83 -YVELGCTKDALELFDELPDK--DLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPN 139
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
E V + V+SAC+ V V + HG +K G EV V N+LI+
Sbjct: 140 E---------------VTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINL 184
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
Y + G ++ + +F+GM + V+WNS++A++ GLA + + F M++ + + T
Sbjct: 185 YGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYF-IMMRRAGINSDQAT 243
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
+ ++LLA +LGV +L + +H ++ L+ ++ + T+++D+Y K G + + K F M
Sbjct: 244 VVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMI 303
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
+ +WTAM++ Y MH R REA++ F M++ GV P+++TF +LSACSH+GLV+EG +
Sbjct: 304 NPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKN 363
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ M + +E VEHY CMVDLLGR+G L +AY LI+ M ++ + VWG+L+GACR+
Sbjct: 364 YFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVR 423
Query: 473 KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSL 532
N++LG+ A++LF L+P++ ++ LSN+Y+ AG+W D + R+LMK R L + PG S
Sbjct: 424 GNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIRNPGCSY 483
Query: 533 VELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLR 592
+E K+H F++GD+ HP E+IY LEEL K +EVG+ + V+HDVD+E KE +
Sbjct: 484 IEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREVGFASKTEYVLHDVDEEVKEDLIN 543
Query: 593 IHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFK 634
HSEKLA N+R+CGDCH +LIS + R I++RD+KRFH+F
Sbjct: 544 KHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFAKLISLIEKRTIIIRDTKRFHHFT 603
Query: 635 DGLCSCGDYW 644
+GLCSCGDYW
Sbjct: 604 NGLCSCGDYW 613
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 190/383 (49%), Gaps = 31/383 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSAL 86
LF++ DK+ V SWNS+I+ +R D L MR ++ L P T + +C+ +
Sbjct: 95 LFDELPDKDLV-SWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGV 153
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+L GK H A G +V V ++LI++Y KCG L A LF+ + ++++VSW S
Sbjct: 154 GELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMS--VQSLVSWNS 211
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ +V A + + F ++ A NSD + S+L AC + V +
Sbjct: 212 MVAVHVHMGLAEKGIGYF--IMMRR-----AGINSDQ-----ATVVSLLLACENLGVRKL 259
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
E HG+++ G D + + L+D YA+ G + S KVF GMI DAV W ++++ YA
Sbjct: 260 AEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAM 319
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESV 325
+G EA++ F+ MV+ V + VT + +L A +H G++ GK + + +E V
Sbjct: 320 HGRGREAIEHFELMVREGVVP-DHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRV 378
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL------ 378
+ ++D+ + G ++ A K M E N W A+I CR R ++L
Sbjct: 379 EHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGA----CRVRGNIELGKEVAE 434
Query: 379 -FYKMIKAGVRPNYITFVSVLSA 400
+ + + R NYIT ++ SA
Sbjct: 435 RLFSLDPSDSR-NYITLSNMYSA 456
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/584 (38%), Positives = 334/584 (57%), Gaps = 65/584 (11%)
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
L P P KSC+A L G+Q H G +VFV+ + I MY++CG DA
Sbjct: 8 LLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAY 67
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
++F+E+ + R++VSW +M++G+ A+ +F+E + +C D+
Sbjct: 68 QMFEEM--QYRDVVSWNAMISGFAHAGLFGRAMDVFRELV--ALQCPKP---------DA 114
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
+AS+L + + V + + + VFD
Sbjct: 115 GTMASILPSMGKARVEDIA---------------------------------LLKGVFDE 141
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M K ++WN+++A+Y N + EA+++F +M K ++ +AVTL+ VL + + L L
Sbjct: 142 MRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKD-GIEPDAVTLATVLPSCGEVSALSL 200
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK IH+ + + + S+++ +++DMY CG + AR F+ M ++V SWT++I+ YG
Sbjct: 201 GKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGR 260
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H REA+DLF KM G+ P+ I FV++L+ACSHAGL+ G H+ +M EF+I P +E
Sbjct: 261 HGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLE 320
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HY CMVDLLGRAG ++EAYD I M +K + VWG+LLGACRIH N+D+G +AA L L
Sbjct: 321 HYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRL 380
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
P GY+VLLSNIYA AGRW DV RS+M+++ + K PG S EL +VH F +GD
Sbjct: 381 APKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTS 440
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
HPQ + IY+ L EL +++E+GY ++ + +HDV++E+KE L +HSEKLA
Sbjct: 441 HPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTN 500
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFK 634
NLR C DCH +LIS + REI+++D R HY K
Sbjct: 501 PGTPIRITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 544
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 32/235 (13%)
Query: 38 VFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ 97
+ SWN+++A VEA+ F M+K + P T + SC + L GK+ H+
Sbjct: 147 LISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHE 206
Query: 98 QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA 157
+ + +AL+DMY+ CG L +AR +FD + R++VSWTS+++ Y ++ +
Sbjct: 207 VIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMG--TRDVVSWTSIISAYGRHGHG 264
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
REA+ LF E CG E DS+A ++L+ACS + + G H F
Sbjct: 265 REAIDLF------EKMCGQGLEP------DSIAFVAILAACSHAGL--LDMGKHYFY--- 307
Query: 218 GFDSEVGVGNTL------IDAYARGGHVDVSRKVFDGM----IEKDAVTWNSIIA 262
SE + L +D R G + R+ +D + I+ + W +++
Sbjct: 308 SMTSEFHIAPKLEHYACMVDLLGRAGCI---REAYDFIMVMPIKPNERVWGALLG 359
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 248/638 (38%), Positives = 345/638 (54%), Gaps = 66/638 (10%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
+ NNV + N +IA R GD A+R F M+ S S K K
Sbjct: 37 NNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAK-----------K 85
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELS---------DARKLFDEIPQRIRNIVSW 144
H F + R +F + S L+ DAR FD +P ++++ SW
Sbjct: 86 PGH-----FEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMP--LKDVASW 138
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
+M++ Q EA LF + E C V A+ S AC ++
Sbjct: 139 NTMISALAQVGLMGEARRLFSA--MPEKNC-----------VSWSAMVSGYVACG--DLD 183
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
E + ++ V +I Y + G V+++ ++F M + VTWN++IA Y
Sbjct: 184 AAVECFYAAPMR-----SVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGY 238
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
+NG A + L +F M++ T VK NA++L++VLL ++L L+LGK +H V K L
Sbjct: 239 VENGRAEDGLRLFRTMLE-TGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSD 297
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
GTS++ MY KCG + A + F Q+ K+V W AMI+GY H ++AL LF +M K
Sbjct: 298 TTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKK 357
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
G++P++ITFV+VL AC+HAGLV G + NTM +F IE EHY CMVDLLGRAGKL
Sbjct: 358 EGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLS 417
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
EA DLI+ M K ++G+LLGACRIHKN++L E AAK L EL+P +V L+N+YA
Sbjct: 418 EAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYA 477
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
RW+ V R MK+ + K PG+S +E+ VH F D+ HP+ I+E L++L
Sbjct: 478 AQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEK 537
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
K++ GYV D+ V+HDV +E KE L HSEKLA NLRVCGD
Sbjct: 538 KMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGD 597
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH+ + IS + REI+VRD+ RFH+FKDG CSC DYW
Sbjct: 598 CHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
S +++ +S+VS K + LF + + + +V WN++I+ A+ G +ALR F
Sbjct: 296 SDTTAGTSLVSMYSKCGDLKDAWELFIQ-IPRKDVVCWNAMISGYAQHGAGKKALRLFDE 354
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS------ALIDM 117
M+K L P TF + +C+ H+G + RD + + ++D+
Sbjct: 355 MKKEGLKPDWITFVAVLLACN-----HAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDL 409
Query: 118 YSKCGELSDARKLFDEIP 135
+ G+LS+A L +P
Sbjct: 410 LGRAGKLSEAVDLIKSMP 427
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/587 (39%), Positives = 345/587 (58%), Gaps = 41/587 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQR 137
+K CS + + KQ+H + G D F +S L+ S G + A +F ++ +
Sbjct: 38 LKKCSNMEEF---KQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDEL 94
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ +M+ G+V++ N EAL+ +KE +E G V D+ ++L A
Sbjct: 95 --GSFQFNTMMRGHVKDMNTEEALITYKEM----AERG--------VKPDNFTYPTLLKA 140
Query: 198 CSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
C+R+ V EG H ++K G +++V V N+LI Y + G + V VF+ M E+
Sbjct: 141 CARLP--AVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVA 198
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+W+++I +A G+ ++ L + M + L +VL A HLG L LG+ +H
Sbjct: 199 SWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGF 258
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+++ +VIV TS+I+MY KCG + F +M +KN S++ MI+G MH RE
Sbjct: 259 LLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREG 318
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
L +F +M++ G+ P+ I +V VL+ACSHAGLVQEG N M E IEP ++HYGCMVD
Sbjct: 319 LRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVD 378
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY 495
L+GRAGK+ EA +LI+ M ++ + V+W SLL A ++H N+ GEIAAK+LF+L+
Sbjct: 379 LMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASD 438
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
+V+LSN+YA A RWEDV +TR+ M ++ L++ PGFSLVE++ K+H F+ D HPQ E +
Sbjct: 439 YVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESV 498
Query: 556 YEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------- 599
YE L ++ +L+ GY D T V+ DVD+EEK+ L HS+KLA
Sbjct: 499 YEMLYQMEWQLKFEGYSPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPIRI 558
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCHT +LIS + DREI VRD RFH+FKDG CSC DYW
Sbjct: 559 VRNLRMCNDCHTYTKLISIIFDREITVRDRHRFHHFKDGACSCRDYW 605
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 167/341 (48%), Gaps = 16/341 (4%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ +D+ F +N+++ + ++ EAL + M + + P T+P +K+C+ L +
Sbjct: 89 RQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVE 148
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G Q H G DVFV ++LI MY KCGE+ +F+++ + R++ SW++++T
Sbjct: 149 EGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNE--RSVASWSALITA 206
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
+ + L L G N + + SVLSAC+ + +
Sbjct: 207 HASLGMWSDCLRLL-----------GDMSNEGYWRAEESILVSVLSACTHLGALDLGRSV 255
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HGF+++ V V +LI+ Y + G + +F M +K+ ++++ +I+ A +G
Sbjct: 256 HGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYG 315
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGT 329
E L +F +M++ ++ + + VL A +H G+++ G +C + ++ +E ++
Sbjct: 316 REGLRIFTEMLEQ-GLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYG 374
Query: 330 SIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + G++D A + M E N W ++++ +H
Sbjct: 375 CMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVH 415
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/650 (37%), Positives = 348/650 (53%), Gaps = 80/650 (12%)
Query: 17 DKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTF 76
+ H +N N +YV NVF +N +I + + +A+ + M P + T+
Sbjct: 74 NPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTY 133
Query: 77 PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
P K+C+A G Q H G DV + SA I MY GE+
Sbjct: 134 PTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEV------------ 181
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
+ AR L G NSD +
Sbjct: 182 ------------------EGARRML--------------GEDGNSDVI------------ 197
Query: 197 ACSRVTVNGVTEGAHGFVIKRGF----DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK 252
C ++G + K F D VG N ++ A+ G ++ +R++F+ M EK
Sbjct: 198 -CFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEK 256
Query: 253 DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI 312
+ ++W+++I Y + G EAL+VF+ M + +++ LS+VL A A+LG L G+ I
Sbjct: 257 NEISWSAMIDGYIKGGYYKEALEVFNVMQRE-EIRPRKFVLSSVLAACANLGALDQGRWI 315
Query: 313 HDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
H V ++GT+++DMY KCG++D+A F +M++K V +W AMI G GMH RA
Sbjct: 316 HAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRA 375
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC 432
+A++LF+KM K RPN IT + VLSAC+H+G+V EG N+M + IEPG+EHYGC
Sbjct: 376 EDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGC 435
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNN 492
+VDLLGRAG L EA +++ M ++ VWG+LLGACR H +V+LGE K L ELEP N
Sbjct: 436 VVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQN 495
Query: 493 CGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQH 552
G + LLSNIYA AGRW+DV R LMK R + + G S+++ G VH F +GD HPQ
Sbjct: 496 SGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQM 555
Query: 553 EKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------- 599
+ IY L+ + +L+ G+ + + V+ D+++EEKE L+ HSEKLA
Sbjct: 556 KNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTT 615
Query: 600 -----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH+ +LIS+V DREI+VRD R+H+FK G CSC D+W
Sbjct: 616 IHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/587 (40%), Positives = 336/587 (57%), Gaps = 41/587 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID--MYSKCGELSDARKLFDEIPQR 137
+K C ++ + K+ H G D F S L+ S+ G + A +F +I +
Sbjct: 38 LKRCKSMEEF---KKVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFRQIEEP 94
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ +M+ G V + + EALLL+ E L E G +N FV L A
Sbjct: 95 --GSFEYNTMIRGNVNSMDLEEALLLYVEML----ERGIEPDNFTYPFV--------LKA 140
Query: 198 CSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
CS + + EG H V G + +V V N LI Y + G ++ + VF+ M EK
Sbjct: 141 CSLLV--ALKEGVQIHAHVFNAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVA 198
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+W+SII +A + E L + M + + L + L A HLG LG+CIH
Sbjct: 199 SWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGI 258
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+++ E +V+V TS+IDMY KCG ++ F M KN S+T MIAG +H R REA
Sbjct: 259 LLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREA 318
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
L +F M++ G+ P+ + +V VLSACSHAGLV+EG+ N M E I+P ++HYGCMVD
Sbjct: 319 LRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVD 378
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY 495
L+GRAG LKEAYDLI+ M +K + VVW SLL AC++H N+++GEIAA +F+L +N G
Sbjct: 379 LMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAADNIFKLNKHNPGD 438
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
+++L+N+YA A +W +V R R+ M + L +TPGFSLVE V+ F+ DK PQ E I
Sbjct: 439 YLVLANMYARAQKWANVARIRTEMVEKNLVQTPGFSLVEANRNVYKFVSQDKSQPQCETI 498
Query: 556 YEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------- 599
Y+ ++++ +L+ GY DM+ V+ DVD++EK L+ HS+KLA
Sbjct: 499 YDMIQQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPVRI 558
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCHT + IS + +REI VRDS RFH+FKDG CSC DYW
Sbjct: 559 SRNLRMCNDCHTYTKFISVIYEREITVRDSNRFHHFKDGTCSCKDYW 605
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ +++ F +N++I D EAL + M + + P T+P +K+CS L L
Sbjct: 89 RQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALK 148
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G Q H F G DVFV + LI MY KCG + A +F+++ + +++ SW+S++
Sbjct: 149 EGVQIHAHVFNAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDE--KSVASWSSIIGA 206
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
+ + E L+L + E G +++ V S LSAC+ + +
Sbjct: 207 HASVEMWHECLMLLGDMSRE-----GRHRAEESILV------SALSACTHLGSPNLGRCI 255
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG +++ + V V +LID Y + G ++ VF M K+ ++ +IA A +G
Sbjct: 256 HGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRG 315
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGT 329
EAL VF M++ + + V VL A +H G+++ G +C +
Sbjct: 316 REALRVFSDMLEE-GLTPDDVVYVGVLSACSHAGLVKEGFQCFN---------------- 358
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
R F M + ++ + M+ G +EA DL M ++P
Sbjct: 359 ---------------RMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSM---PIKP 400
Query: 390 NYITFVSVLSAC 401
N + + S+LSAC
Sbjct: 401 NDVVWRSLLSAC 412
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/657 (34%), Positives = 361/657 (54%), Gaps = 65/657 (9%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKL--SLTPTRSTFPCAIKSCSALHDLHSGKQAHQ 97
+W S+I+ AR G + +RAF+ M + P ++ C+ L D+ SG++ H
Sbjct: 91 AWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHG 150
Query: 98 QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR-------------------- 137
G DV + +A++DMY+KCG+ AR+ F + Q+
Sbjct: 151 WILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVG 210
Query: 138 ---------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
+R++ SW ++++G +++ + EAL ++ + S+ +
Sbjct: 211 ATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVR------AGVTFSNYTYSMV 264
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD- 247
A+A +LS+ + HG V+ + + VG +L+D Y + G ++ + +FD
Sbjct: 265 FALAGLLSS------RDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDR 318
Query: 248 --GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
E W++++A Y QNG EAL+ F +M++ V L++V A A+ G+
Sbjct: 319 WSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLRE-GVPAGQFILTSVASACANAGM 377
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
+ G+ +H V K+ + ++I+DMY K G ++ A + F + KNV WT M+
Sbjct: 378 VEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCS 437
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y H + R AL++F +M + PN IT V+VLSACSH+GLV +G+H+ N M E+ I P
Sbjct: 438 YASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVP 497
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
EHY CMVDL GRAG L +A + IE K+ + VVW +LL ACR+HK+++ ++A++KL
Sbjct: 498 NTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKL 557
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
+LE + G +VL+SN+YA +W D + RS MK RR+ K PG S + L+ VH F+
Sbjct: 558 VQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVAL 617
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
D HP+ +IY YLE+L +L+E+GY + V+HD+++E++E +L+ HSEKLA
Sbjct: 618 DTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGII 677
Query: 600 ------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH I+ I++ DREIVVRD RFH+FKDG CSC D+W
Sbjct: 678 STPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 183/380 (48%), Gaps = 55/380 (14%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L +A ++FD P R++ +WTS+++G + + + F E L ECG + N+
Sbjct: 74 LHNAHRVFDGTP--TRSLPAWTSIISGCAREGRHADGMRAFAEML---DECGATAPNA-- 126
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
FV +A VL C+ + HG++++ G +V + N ++D YA+ G +R
Sbjct: 127 -FV----LAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRAR 181
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD------------------------- 278
+ F M +KDA +WN +I Q+G A +FD
Sbjct: 182 RAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTE 241
Query: 279 ------QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
QMV++ V + T S V L LG+ +H +V+ LEE VG S++
Sbjct: 242 ALGRLQQMVRA-GVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLM 300
Query: 333 DMYCKCGQVDLARKAFNQ---MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
DMYCKCG+++ A F++ E +W+ M+AGY + R EAL+ F +M++ GV
Sbjct: 301 DMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPA 360
Query: 390 NYITFVSVLSACSHAGLVQEGWH---WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
SV SAC++AG+V++G ++ +GH F+ +VD+ ++G L++A
Sbjct: 361 GQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLA----SAIVDMYSKSGSLEDA 416
Query: 447 YDLIEGMKVKADFVVWGSLL 466
+ + K + +W ++L
Sbjct: 417 CRIFRSAQTK-NVALWTTML 435
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 165/354 (46%), Gaps = 31/354 (8%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
T LF++ +V SWN++++ L R G + EAL M + +T + T+
Sbjct: 212 TQLFDE-SSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGL 270
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN-IVSW 144
L G+Q H + + D FV +L+DMY KCGE+ A +FD + +W
Sbjct: 271 LSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAW 330
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++M+ GYVQN EAL F+ L E G + SV SAC+ +
Sbjct: 331 STMVAGYVQNGREEEALEFFRRMLREGVPAG------------QFILTSVASACANAGMV 378
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
HGFV K G + + + ++D Y++ G ++ + ++F K+ W +++ Y
Sbjct: 379 EQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSY 438
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
A +G AL++F +M K+ + N +TL AVL A +H G++ G + EE
Sbjct: 439 ASHGQGRMALEIFSRM-KAEKIMPNEITLVAVLSACSHSGLVSDGY----HYFNLMQEEY 493
Query: 325 VIVGTS-----IIDMYCKCGQVDLARKAFNQMKEKNVRS----WTAMIAGYGMH 369
IV + ++D+Y + G +D KA N ++E + W +++ +H
Sbjct: 494 GIVPNTEHYNCMVDLYGRAGLLD---KAKNFIEENKISHEAVVWKTLLSACRLH 544
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 34/198 (17%)
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC-NAVT 292
ARG H + +VFDG + W SII+ A+ G A+ + F +M+ NA
Sbjct: 71 ARGLHN--AHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFV 128
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
L+ VL A LG + G+ IH +++ + V++ +++DMY KCG AR+AF M
Sbjct: 129 LAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMA 188
Query: 353 EK-------------------------------NVRSWTAMIAGYGMHCRAREALDLFYK 381
+K +V SW +++G H EAL +
Sbjct: 189 QKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQ 248
Query: 382 MIKAGVRPNYITFVSVLS 399
M++AGV + T+ V +
Sbjct: 249 MVRAGVTFSNYTYSMVFA 266
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 26/199 (13%)
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
SA LL A G K IH Q ++ + S ++ + + A + F+
Sbjct: 39 SARLLPEA--GACAAKKAIHRQSVRGCVPSSSVIARGLHN----------AHRVFDGTPT 86
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIK--AGVRPNYITFVSVLSACSHAGLVQEGW 411
+++ +WT++I+G R + + F +M+ PN VL C+ G V+ G
Sbjct: 87 RSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGR 146
Query: 412 H---WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
W+ G + P V ++D+ + G A M K D W ++ A
Sbjct: 147 RIHGWILRSG----VCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQK-DATSWNIVIRA 201
Query: 469 CRIHKNVDLGEIAAKKLFE 487
C ++ DL + A +LF+
Sbjct: 202 CL--QDGDL--VGATQLFD 216
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/640 (37%), Positives = 369/640 (57%), Gaps = 38/640 (5%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++F V+K++V SWNS+I+ L + S +A +F MR+ P+ T + SC++L
Sbjct: 916 SVFELMVEKDSV-SWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASL 974
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ G+Q H G DV VS+AL+ +Y++ G ++ K+F +P+ + VSW S
Sbjct: 975 GWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEY--DQVSWNS 1032
Query: 147 MLTGYVQND-NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
++ ++ + +A+ F E + GG + V ++LSA S ++++
Sbjct: 1033 VIGALSDSEASVSQAVKYFLEMMR-----GGWG-------LSRVTFINILSAVSSLSLHE 1080
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWNSIIAIY 264
V+ H V+K + +GN L+ Y + G ++ K+F M E +D V+WNS+I+ Y
Sbjct: 1081 VSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGY 1140
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
N L +A+D+ M++ + ++ T + VL A A + L G +H I+ +E
Sbjct: 1141 IHNELLHKAMDLVWFMMQKGQ-RLDSFTFATVLSACASVATLERGMEVHACGIRACMESD 1199
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V+VG++++DMY KCG++D A + F M +NV SW +MI+GY H +AL LF +M+
Sbjct: 1200 VVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMML 1259
Query: 385 AGVRPNYI-TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
G P+++ + VLSACSH G V+EG+ +M + + P VEH+ CMVDLLGRAGKL
Sbjct: 1260 DGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKL 1319
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGAC-RIH-KNVDLGEIAAKKLFELEPNNCGYHVLLSN 501
E D I M +K + ++W ++LGAC R + +N +LG AA+ L ELEP N +VLL+N
Sbjct: 1320 DEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLAN 1379
Query: 502 IYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEE 561
+YA+ +WEDV + R MK + K G S V ++ VH F+ GDK HP+ + IY+ L E
Sbjct: 1380 MYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRE 1439
Query: 562 LNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------NLRVC 604
LN K+++ GY+ + D++ E KE L HSEK+A NLRVC
Sbjct: 1440 LNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTRQSALPIRIMKNLRVC 1499
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
GDCH+ ISK+V R+IV+RDS RFH+F+DG CSCGDYW
Sbjct: 1500 GDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 206/450 (45%), Gaps = 23/450 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC--SA 85
LF++ ++N V +W +I+ + G EA F M + P F A+++C S
Sbjct: 601 LFDEMSNRNLV-TWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC-GELSDARKLFDEIPQRIRNIVSW 144
G Q H + DV V + LI MY C +DAR +FD I IRN +SW
Sbjct: 660 PSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIG--IRNSISW 717
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
S+++ Y + + A LF + E G S + S+ + +ACS V
Sbjct: 718 NSIISVYSRRGDXVSAYDLFSSM---QKEGLGFSFKPNEYTFGSL----ITAACSSVDFG 770
Query: 205 -GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
V E V K GF ++ VG+ L+ +AR G D ++ +F+ M ++ V+ N ++
Sbjct: 771 LCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVG 830
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL----RLGKCIHDQVIKM 319
+ A VF +M V N+ + +L A + VL R G+ +H VI+
Sbjct: 831 LVKQKQGEAAAKVFHEM--KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRT 888
Query: 320 DLEES-VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
L ++ V +G +++MY K G + A F M EK+ SW ++I+G + + +A +
Sbjct: 889 GLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAES 948
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
F +M + G P+ T +S LS+C+ G + G ++ G + ++ V ++ L
Sbjct: 949 FLRMRRTGSMPSNFTLISTLSSCASLGWIMLG-EQIHCDGLKLGLDTDVSVSNALLALYA 1007
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
G E + M + D V W S++GA
Sbjct: 1008 ETGCFTECLKVFSLMP-EYDQVSWNSVIGA 1036
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 206/434 (47%), Gaps = 44/434 (10%)
Query: 53 DSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS 112
D V+ + +S +L + TF I ++ H Q+ +GF ++F+S+
Sbjct: 524 DLVDHYKTSTSHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSN 583
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
LI++Y + G+L A+KLFDE+ RN+V+W +++GY QN EA F++ +
Sbjct: 584 TLINIYVRIGDLGSAQKLFDEMSN--RNLVTWACLISGYTQNGKPDEACARFRDMV---- 637
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLI 230
+ A S L AC +G G HG + K + S+V V N LI
Sbjct: 638 --------RAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLI 689
Query: 231 DAYARGGHVDV---SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST--- 284
Y G +D +R VFD + +++++WNSII++Y++ G A D+F M K
Sbjct: 690 SMY--GSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGF 747
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI----KMDLEESVIVGTSIIDMYCKCGQ 340
K N T +++ A + G C+ +Q++ K + + VG++++ + + G
Sbjct: 748 SFKPNEYTFGSLITAAC--SSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGL 805
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
D A+ F QM +NV S ++ G + A +F++M K V N ++V +LSA
Sbjct: 806 TDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVLLSA 864
Query: 401 CSHAGLVQEG--------WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
S +++EG H + T ++ + G +V++ ++G + +A + E
Sbjct: 865 FSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIG----NGLVNMYAKSGAIADACSVFEL 920
Query: 453 MKVKADFVVWGSLL 466
M V+ D V W SL+
Sbjct: 921 M-VEKDSVSWNSLI 933
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 140/307 (45%), Gaps = 35/307 (11%)
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
IK GF + + NTLI+ Y R G + ++K+FD M ++ VTW +I+ Y QNG EA
Sbjct: 571 IKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEAC 630
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV--LRLGKCIHDQVIKMDLEESVIVGTSII 332
F MV++ + N + L A G +LG IH + K V+V +I
Sbjct: 631 ARFRDMVRAGFIP-NHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLI 689
Query: 333 DMYCKC-GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV---- 387
MY C + AR F+++ +N SW ++I+ Y A DLF M K G+
Sbjct: 690 SMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSF 749
Query: 388 RPNYITFVSVLS-ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDL---------L 437
+PN TF S+++ ACS V G L M VE G + DL
Sbjct: 750 KPNEYTFGSLITAACSS---VDFGLCVLEQMLAR------VEKSGFLQDLYVGSALVSGF 800
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP----NNC 493
R G +A ++ E M V+ + G ++G + + GE AAK E++ N+
Sbjct: 801 ARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQ----GEAAAKVFHEMKDLVGINSD 856
Query: 494 GYHVLLS 500
Y VLLS
Sbjct: 857 SYVVLLS 863
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/613 (38%), Positives = 350/613 (57%), Gaps = 72/613 (11%)
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
KS S H L Q H G + + ++ L Y+ G L + +F+ + N
Sbjct: 56 KSKSVAHLL----QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEP--N 109
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
+ S+++++ +VQ+ A + + L CG V ++ +SVL +CS
Sbjct: 110 VFSFSAIIHSHVQSRLFDRAFGYYSQML----SCG--------VEPNAFTFSSVLKSCSL 157
Query: 201 VTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV--------------------- 239
+ + H IK G S++ V L+D YARGG V
Sbjct: 158 ES----GKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTM 213
Query: 240 ----------DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCN 289
D +R +F+GM E+D V WN +I YAQ+G+ E+L +F +M+ + + N
Sbjct: 214 LTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIP-N 272
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
VT+ AVL A LG L G+ IH + ++ +V VGT++IDMY KCG ++ AR F+
Sbjct: 273 EVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFD 332
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
++++K+V +W +MI GY MH ++ AL LF +M + G +P ITF+ +LSAC H GLV+E
Sbjct: 333 RIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEE 392
Query: 410 GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G + M ++ IEP +EHYGCMV+LLGRAG L+EAY L++ M + AD V+WG+LLG C
Sbjct: 393 GRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCC 452
Query: 470 RIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPG 529
R+H N+ LGE AK L + + N G +VLLSN+YA G WE V + R+LMK + K G
Sbjct: 453 RLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHG 512
Query: 530 FSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEM 589
S +E+ KVH F+ G+++HP+ ++IY L E+N L+ GY V+HD+ +E+KE
Sbjct: 513 CSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQ 572
Query: 590 TLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFH 631
+L +HSEKLA NLRVC DCHTV+++IS++ R+IV+RD RFH
Sbjct: 573 SLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFH 632
Query: 632 YFKDGLCSCGDYW 644
+F+DGLCSCGDYW
Sbjct: 633 HFEDGLCSCGDYW 645
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 153/312 (49%), Gaps = 47/312 (15%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN + D+ NVFS++++I + A +S M + P TF +KSCS
Sbjct: 101 VFNTF-DEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS--- 156
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI--------- 138
L SGK H QA G D++V + L+D+Y++ G++ AR+LFD++P+R
Sbjct: 157 -LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLT 215
Query: 139 --------------------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
R++V W M+ GY Q+ E+L LF+ L+ ++
Sbjct: 216 CYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKA------ 269
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
+ V + +VLSAC ++ H ++ +G V VG LID Y++ G
Sbjct: 270 ------IPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGS 323
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
++ +R VFD + +KD V WNS+I YA +G + AL +F++M + T K +T +L
Sbjct: 324 LEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTE-TGHKPTDITFIGILS 382
Query: 299 AIAHLGVLRLGK 310
A H G++ G+
Sbjct: 383 ACGHGGLVEEGR 394
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/632 (38%), Positives = 365/632 (57%), Gaps = 66/632 (10%)
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELS 125
SL P S FPC + DL KQ H Q RD ++ L+ S +L
Sbjct: 11 SLWPPSSFFPC-----KTMQDL---KQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLD 62
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES------------- 172
ARK+F + + N S+ +++ ++++ +ALL+F E + + S
Sbjct: 63 YARKIFRSMHRP--NCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFK 120
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVN--------GVTEGAHGFVIKRGF----- 219
CG A + V +A+ L + V N GV E AH +R F
Sbjct: 121 ACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCD 180
Query: 220 ---------DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
D +V + N +ID Y R G ++V+R +FD M ++ V+WN +IA YAQ+G
Sbjct: 181 GIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHF 240
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA++VF +M + +V N VTL +VL A++ LG L LGK +H ++ ++ ++G++
Sbjct: 241 KEAVEVFREM-QMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSA 299
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+IDMY KCG ++ A + F + ++NV +W+ +IAG MH RA++ LD F M +AGV P+
Sbjct: 300 LIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPS 359
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+T++ +LSACSHAGLV EG + + M +EP +EHYGCMVDLLGRAG L+E+ +LI
Sbjct: 360 DVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELI 419
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
M +K D V+W +LLGAC++H NV++G+ A+ L EL P++ G +V LSNIYA+ G WE
Sbjct: 420 LNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWE 479
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
V + R +MK + K PG S +EL G +H FLV D HP+ +KI+ L+E++ L VG
Sbjct: 480 GVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVG 539
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
Y + T V+ ++D+E+KE +L HSEK+A NLR+C DCH+ I+
Sbjct: 540 YRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIK 599
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
LISK+ R+I+VRD KRFH+F +G CSC DYW
Sbjct: 600 LISKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 179/384 (46%), Gaps = 64/384 (16%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
+ N FS+N++I L+ D +AL F M S+ P TFP K+C L G+
Sbjct: 73 RPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGR 132
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKC-------------------------------- 121
Q H A FG D FV S ++ MY C
Sbjct: 133 QVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGD 192
Query: 122 --------------GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
GEL AR LFDE+PQ R++VSW M+ GY Q+ + +EA+ +F+E
Sbjct: 193 VVLWNVMIDGYVRIGELEVARNLFDEMPQ--RSVVSWNVMIAGYAQSGHFKEAVEVFREM 250
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN 227
+ E V + V + SVL A SR+ + + H + ++ + +G+
Sbjct: 251 QMAE------------VPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGS 298
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
LID YA+ G ++ + +VF+G+ +++ VTW++IIA A +G A + LD F+ M ++ V
Sbjct: 299 ALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAG-VM 357
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARK 346
+ VT +L A +H G++ G+ D ++++ LE + ++D+ + G ++ + +
Sbjct: 358 PSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEE 417
Query: 347 AFNQMKEK-NVRSWTAMIAGYGMH 369
M K + W A++ MH
Sbjct: 418 LILNMPIKPDDVIWKALLGACKMH 441
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 21/246 (8%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
LF++ + + +V SWN +IA A+ G EA+ F M+ + P T + + S L
Sbjct: 214 NLFDE-MPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRL 272
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L GK H A D + SALIDMY+KCG + A ++F+ +P+ RN+V+W++
Sbjct: 273 GALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPK--RNVVTWST 330
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ G + A++ L F E+ E G V V +LSACS + V
Sbjct: 331 IIAGLAMHGRAKDTLDHF-----EDMERAG-------VMPSDVTYIGLLSACSHAGL--V 376
Query: 207 TEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
EG F V G + + ++D R G ++ S ++ M I+ D V W +++
Sbjct: 377 NEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLG 436
Query: 263 IYAQNG 268
+G
Sbjct: 437 ACKMHG 442
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/578 (39%), Positives = 326/578 (56%), Gaps = 72/578 (12%)
Query: 118 YSKCGELSDARKLFDEIPQRIRN--IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG 175
Y+ G L + LF R +N + WT+++ G+ +AL + + L + E
Sbjct: 19 YASLGRLDYSVALFG----RTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVE-- 72
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
N F +S+L C + H +K GFDS++ V L+D YAR
Sbjct: 73 ------PNAF----TFSSILKLCPIEP----GKALHSQAVKLGFDSDLYVRTGLLDVYAR 118
Query: 236 GGHV-------------------------------DVSRKVFDGMIEKDAVTWNSIIAIY 264
GG V D +R +FDGM E+D V WN +I Y
Sbjct: 119 GGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGY 178
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
QNG+ EAL +F +M+K+ K N VT+ +VL A LG L G+ +H + ++ +
Sbjct: 179 TQNGMPNEALVLFRRMLKAK-AKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFN 237
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V VGT+++DMY KCG ++ AR F+++ +K+V +W +MI GY M ++EAL LF M +
Sbjct: 238 VHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCR 297
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
G+ P ITF+ +LSAC H+G V EGW N M E+ IEP +EHYGCMV+LLGRAG ++
Sbjct: 298 MGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVE 357
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
+AY+L++ M ++ D V+WG+LLGACR+H + LGE + L + N G ++LLSNIYA
Sbjct: 358 QAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYA 417
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
G W+ V R R++MK+ + K PG S +E+ KVH FL G HP+ ++IY LEE+N
Sbjct: 418 AVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEING 477
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
L+ GY V+HD+ + EKE +L +HSEKLA NLRVC D
Sbjct: 478 WLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCAD 537
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH V +LISK+ R+IVVRD RFH+F +G CSCGDYW
Sbjct: 538 CHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 575
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 179/401 (44%), Gaps = 58/401 (14%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+VF W ++I A G +AL ++ M + P TF +K C + GK H
Sbjct: 39 SVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALH 94
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI------------------ 138
QA GF D++V + L+D+Y++ G++ A++LFD +P++
Sbjct: 95 SQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELD 154
Query: 139 -----------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R+ V W M+ GY QN EAL+LF+ L +++ +
Sbjct: 155 AARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAK------------PN 202
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
V + SVLSAC ++ H ++ G V VG L+D Y++ G ++ +R VFD
Sbjct: 203 EVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFD 262
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ +KD V WNS+I YA G + EAL +F M + N +T +L A H G +
Sbjct: 263 KIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTN-ITFIGILSACGHSGWVT 321
Query: 308 LGKCIHDQVI-KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAG 365
G I +++ + +E + ++++ + G V+ A + M E + W ++
Sbjct: 322 EGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA 381
Query: 366 YGMHCRAREALDLFYKMIKAGVRPN------YITFVSVLSA 400
CR + L K+++ V N YI ++ +A
Sbjct: 382 ----CRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAA 418
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 44/274 (16%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
+ L +YA G +D S +F W +II +A GL +AL+ + QM+ + V
Sbjct: 13 DKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQML-TQGV 71
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM------------ 334
+ NA T S++L L + GK +H Q +K+ + + V T ++D+
Sbjct: 72 EPNAFTFSSIL----KLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQ 127
Query: 335 -------------------YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
Y K G++D AR F+ M+E++ W MI GY + EA
Sbjct: 128 LFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEA 187
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG-W--HWLNTMGHEFNIEPGVEHYGC 432
L LF +M+KA +PN +T +SVLSAC G ++ G W ++ G +FN+ G
Sbjct: 188 LVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGT----A 243
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+VD+ + G L++A + + + K D V W S++
Sbjct: 244 LVDMYSKCGSLEDARLVFDKIDDK-DVVAWNSMI 276
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K +D +V +WNS+I A G S EAL+ F SM ++ L PT TF + +C
Sbjct: 260 VFDK-IDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACG--- 315
Query: 88 DLHSG 92
HSG
Sbjct: 316 --HSG 318
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 245/690 (35%), Positives = 377/690 (54%), Gaps = 98/690 (14%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF K ++ V SWN++I+ G EAL F M + P T + +C+ L
Sbjct: 190 LFEKMTHRD-VISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLK 248
Query: 88 DLHSGKQAH-----QQAFIFGFHRDVFVSSALIDMYSKCGELSDA--------------- 127
DL GK+ H + +I G + + L+DMYSKCG++ +A
Sbjct: 249 DLEMGKRLHLYIVDNKLWIRGS-----LLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVV 303
Query: 128 ------------------RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLL 169
R+LFD++ +R ++VSWT+M++GYVQ E+L LF++
Sbjct: 304 LWTTLVSGYVKSNKIDKARQLFDKMNER--SLVSWTTMMSGYVQGGYYCESLELFQQMRF 361
Query: 170 EESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTL 229
E NV D VA+ +VLSAC + + H F++ G + +GN L
Sbjct: 362 E------------NVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNAL 409
Query: 230 IDAYA-------------------------------RGGHVDVSRKVFDGMIEKDAVTWN 258
+D YA R G VD +R F+ + EKD V+WN
Sbjct: 410 LDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWN 469
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
+++ Y ++ L E+ ++F +M +S++VK + TL ++L + A +G L G ++ + K
Sbjct: 470 TMVNAYVKHDLFNESFEIFCKM-QSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEK 528
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
++ ++GT++IDMY KCG V++A + F Q+ EKNV WTAM+A Y M +A EA+DL
Sbjct: 529 NEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDL 588
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
+ +M + GV+P+++TF+++L+ACSH GLV EG+ + N + +NI P + HYGCMVDLLG
Sbjct: 589 YLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLG 648
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVL 498
R G L+E IE M ++ D +W SL+ ACR H NV+L E A K+L E++P N G HVL
Sbjct: 649 RVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVL 708
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEY 558
LSNIYA+AGRW+DV + R+ + + K PGF+++E G VH F+ + + +
Sbjct: 709 LSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASNLVSADILCMLQD 768
Query: 559 LEELNVKLQEVGYVTDMTS----VIHDVDQEEKEMTLRIHSEKLANLRVCGDCHTVIRLI 614
+E + QE+ T S V + ++ +R+ + ++R+C DCH+V++LI
Sbjct: 769 IERRLLVKQELSDTTSQHSERLAVAFGLINNQENSPIRV----VNSVRMCRDCHSVMKLI 824
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S+ DREIV+RD+ RFH F DG CSC DYW
Sbjct: 825 SQAYDREIVIRDNYRFHRFTDGHCSCKDYW 854
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 231/493 (46%), Gaps = 83/493 (16%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN+++ + + G E L + M + STF I +C D+ G + H +
Sbjct: 101 WNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRIL 160
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
GF R+ +++ L+ +YSKCG+L + +LF+++ R+++SW +M++ YV REA
Sbjct: 161 KCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTH--RDVISWNTMISCYVLKGMYREA 218
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV------------------- 201
L LF E L+ V D + + S++S C+++
Sbjct: 219 LDLFDEMLVS------------GVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLW 266
Query: 202 -------------TVNGVTEGAHGFVIKRGFDSEVGV--GNTLIDAYARGGHVDVSRKVF 246
+ G + AHG ++ R +SEV V TL+ Y + +D +R++F
Sbjct: 267 IRGSLLNCLVDMYSKCGKMDEAHG-LLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLF 325
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D M E+ V+W ++++ Y Q G E+L++F QM + +V + V L VL A HL
Sbjct: 326 DKMNERSLVSWTTMMSGYVQGGYYCESLELFQQM-RFENVIPDEVALVTVLSACVHLEDF 384
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ-------------------------- 340
LG+ +H ++ + +G +++D+Y KCG+
Sbjct: 385 DLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGF 444
Query: 341 -----VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
VD AR FN++ EK++ SW M+ Y H E+ ++F KM + V+P+ T +
Sbjct: 445 CRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLI 504
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
S+LS+C+ G + G W+N + I ++D+ G+ G ++ AY++ + +
Sbjct: 505 SLLSSCAKVGALNHGI-WVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQI-I 562
Query: 456 KADFVVWGSLLGA 468
+ + VW +++ A
Sbjct: 563 EKNVFVWTAMMAA 575
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 191/396 (48%), Gaps = 25/396 (6%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+++VS K + LF+K +++ ++ SW ++++ +GG E+L F MR ++
Sbjct: 306 TTLVSGYVKSNKIDKARQLFDK-MNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENV 364
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P + +C L D G+ H +G D F+ +AL+D+Y+KCG+L +A +
Sbjct: 365 IPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALR 424
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF-------------------KEFLLE 170
F+++P ++ SW SML G+ ++ +A F K L
Sbjct: 425 TFEQLP--CKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFN 482
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI 230
ES S NV D + S+LS+C++V + ++ K + +G LI
Sbjct: 483 ESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALI 542
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
D Y + G V+++ ++F +IEK+ W +++A YA G A EA+D++ +M + VK +
Sbjct: 543 DMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEM-EERGVKPDH 601
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
VT A+L A +H G++ G +++ ++ ++ ++D+ + G ++ K
Sbjct: 602 VTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIE 661
Query: 350 QMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+M E +V W++++ H A F ++I+
Sbjct: 662 RMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIE 697
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 145/299 (48%), Gaps = 12/299 (4%)
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
I +L +CS + H +I + + + ++ ++D + ++
Sbjct: 38 IIDLLKSCSNIRE---FSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSH 94
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
E +++ WN+++ + G E L+ + MV + V + T ++ A ++LG
Sbjct: 95 EPESIIWNTLLENKLKEGCPQEVLECYYHMV-TQGVLLDISTFHFLIHACCKNFDVKLGS 153
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
+H +++K + + +++ +Y KCG++ + F +M ++V SW MI+ Y +
Sbjct: 154 EVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKG 213
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW-LNTMGHEFNIEPGVEH 429
REALDLF +M+ +GV P+ IT VS++S C+ ++ G L + ++ I +
Sbjct: 214 MYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSL-- 271
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGM-KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
C+VD+ + GK+ EA+ L+ + + D V+W +L+ +D A++LF+
Sbjct: 272 LNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKID----KARQLFD 326
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/642 (37%), Positives = 360/642 (56%), Gaps = 49/642 (7%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-----SLTPTRSTFPCAIKSCSA 85
K + NV SWN+++ + GD + F +R++ L T A+ C
Sbjct: 348 KLNNNKNVVSWNTMVGGFSAAGD---IHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFE 404
Query: 86 LHDLHSGKQAH----QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI 141
L + K+ H +Q F+ H + V++A + Y+KCG LS A ++F I R + +
Sbjct: 405 ESVLPNLKELHCYSLKQEFV---HNNELVANAFVASYAKCGSLSYAHRVFCSI--RSKTV 459
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
SW +++ GY Q+ + R +L + + S + D + S+LSACS++
Sbjct: 460 NSWNALIGGYSQSSDPRLSLDAYFQM------------KSSGLLPDLFTVCSLLSACSQI 507
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSII 261
+ + HG +I+ + + V +L+ Y G + + +FD M +K V+WN+++
Sbjct: 508 KSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMV 567
Query: 262 AIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL 321
Y QNG AL +F QMV C +++ +V A + L LRLG+ H +K L
Sbjct: 568 NGYLQNGFPERALSLFRQMVLYGVQPCE-ISMMSVFGACSLLPSLRLGREAHGYALKCLL 626
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK 381
E++ + S+IDMY K G V + K FN +KE++V SW AM+ GYG+H RA+EA+ LF +
Sbjct: 627 EDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEE 686
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
M + G P+ +TF+ VL+AC+H+GLV EG +L+ M F + P ++HY C++D+L RAG
Sbjct: 687 MQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAG 746
Query: 442 KLKEAYDL-IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
KL EA + E M + +W LL +CRIHKN+++GE A KLF EP +VLLS
Sbjct: 747 KLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLS 806
Query: 501 NIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLE 560
N+YA +G+W++V + R MK L K G S +EL GKV +F+ G+ E+I
Sbjct: 807 NLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWS 866
Query: 561 ELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLR 602
L ++ ++GY D +SV HD+ +EEK LR HSEKLA NLR
Sbjct: 867 VLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLR 926
Query: 603 VCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+C DCH +LISKV++REIVVRD+KRFH+FK+G CSCGDYW
Sbjct: 927 ICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 214/439 (48%), Gaps = 23/439 (5%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGK 93
K N+F WN+VI+ +R L F M S L P TFPC +K+C+ + ++ G
Sbjct: 145 KKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGL 204
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H DVFVS+AL+ Y G +SDA ++F +P+ RN+VSW SM+ +
Sbjct: 205 AVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPE--RNLVSWNSMIRVFSD 262
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N + E LL + + ++ E D +A+VL C+R GV +G HG
Sbjct: 263 NGLSEECFLLLGQMMEKDDEIAFTP--------DVATLATVLPVCARDREIGVGKGVHGL 314
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+K D EV V N L+D Y++ G ++ ++ +F K+ V+WN+++ ++ G +
Sbjct: 315 AMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKT 374
Query: 274 LDVFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGTSI 331
D+ QM+ D++ + VT+ + VL K +H +K + + + +V +
Sbjct: 375 FDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAF 434
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ Y KCG + A + F ++ K V SW A+I GY R +LD +++M +G+ P+
Sbjct: 435 VASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDL 494
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAY 447
T S+LSACS ++ G H I +E Y ++ L G+L A+
Sbjct: 495 FTVCSLLSACSQIKSLKLGKEV-----HGLIIRNRLERDSFVYISLLSLYIHCGELSTAH 549
Query: 448 DLIEGMKVKADFVVWGSLL 466
L + M+ K V W +++
Sbjct: 550 VLFDAMEDKT-LVSWNTMV 567
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 232/467 (49%), Gaps = 34/467 (7%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR----KLSLTPTRSTFPCAIKSCSAL 86
K + + N+ SWNS+I + G S E M +++ TP +T + C+
Sbjct: 243 KIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARD 302
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
++ GK H A ++V V++AL+DMYSKCG ++DA+ +F +N+VSW +
Sbjct: 303 REIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFK--LNNNKNVVSWNT 360
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ G+ + + L ++ L GG ++ D V I + + C +V
Sbjct: 361 MVGGFSAAGDIHKTFDLLRQML-----AGGG-----DLRADEVTILNAVPVCFEESVLPN 410
Query: 207 TEGAHGFVIKRGF--DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
+ H + +K+ F ++E+ V N + +YA+ G + + +VF + K +WN++I Y
Sbjct: 411 LKELHCYSLKQEFVHNNEL-VANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGY 469
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
+Q+ +LD + QM KS+ + + T+ ++L A + + L+LGK +H +I+ LE
Sbjct: 470 SQSSDPRLSLDAYFQM-KSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERD 528
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V S++ +Y CG++ A F+ M++K + SW M+ GY + AL LF +M+
Sbjct: 529 SFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVL 588
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE---HYGC-MVDLLGRA 440
GV+P I+ +SV ACS ++ G H + ++ +E C ++D+ +
Sbjct: 589 YGVQPCEISMMSVFGACSLLPSLRLGRE-----AHGYALKCLLEDNAFIACSVIDMYAKN 643
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
G + E++ + G+K ++ W +++ IH A KLFE
Sbjct: 644 GSVMESFKVFNGLKERS-VASWNAMVMGYGIHGRAK----EAIKLFE 685
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 158/320 (49%), Gaps = 19/320 (5%)
Query: 88 DLHSGKQAHQQAFIFG-FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D+ G++ HQ D + + +I MYS CG D+R +FD + R +N+ W +
Sbjct: 96 DIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDAL--RKKNLFQWNA 153
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+++ Y +N+ L +F + + E + D+ V+ AC+ V+ V
Sbjct: 154 VISSYSRNELYHNVLEMFVKMITE-----------SGLLPDNFTFPCVVKACAGVSEVQV 202
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
HG V+K +V V N L+ Y G V + +VF M E++ V+WNS+I +++
Sbjct: 203 GLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSD 262
Query: 267 NGLAAEALDVFDQMVKSTD---VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
NGL+ E + QM++ D + TL+ VL A + +GK +H +K+ L++
Sbjct: 263 NGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDK 322
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
V+V +++DMY KCG ++ A+ F KNV SW M+ G+ + DL +M+
Sbjct: 323 EVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQML 382
Query: 384 KAG--VRPNYITFVSVLSAC 401
G +R + +T ++ + C
Sbjct: 383 AGGGDLRADEVTILNAVPVC 402
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 126/257 (49%), Gaps = 10/257 (3%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
+I Y+ G D SR VFD + +K+ WN++I+ Y++N L L++F +M+ + +
Sbjct: 123 VITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLP 182
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+ T V+ A A + +++G +H V+K L E V V +++ Y G V A + F
Sbjct: 183 DNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVF 242
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA----GVRPNYITFVSVLSACSHA 404
M E+N+ SW +MI + + + E L +M++ P+ T +VL C+
Sbjct: 243 KIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARD 302
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGS 464
+ G ++ + + +++ V ++D+ + G + +A +I + + V W +
Sbjct: 303 REIGVG-KGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDA-QVIFKLNNNKNVVSWNT 360
Query: 465 LLG----ACRIHKNVDL 477
++G A IHK DL
Sbjct: 361 MVGGFSAAGDIHKTFDL 377
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/585 (40%), Positives = 337/585 (57%), Gaps = 40/585 (6%)
Query: 84 SALHDLH--SGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQRIR 139
+ LH+ H KQ H G D F S L+ +K G + A +F +I +
Sbjct: 4 TLLHNNHMEEFKQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQIDEP-- 61
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+ + +M+ G V + EALLL+ + + V D VL ACS
Sbjct: 62 SSFDYNTMIRGNVNDMKLEEALLLYVDMI------------ERGVEPDKFTYPFVLKACS 109
Query: 200 RVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
+ V V EG HG V K G + +V V N+LI+ Y + G + + VF+GM EK +W
Sbjct: 110 LLGV--VDEGIQVHGHVFKMGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASW 167
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
++II +A + E L + +M + TL VL A HLG LGKCIH ++
Sbjct: 168 SAIIGAHACVEMWNECLMLLGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILL 227
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ E +V+V TS+IDMY K G ++ + F M EKN S+T MI+G +H R +EAL
Sbjct: 228 RNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALK 287
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
+F +MI+ G+ P+ + +V V SACSHAGLV+EG +M E IEP V+HYGCMVDLL
Sbjct: 288 VFSEMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLL 347
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GR G LKEAY+LI+ M +K + V+W SLL AC++H N+++G+IAA+ LF L NN G ++
Sbjct: 348 GRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYL 407
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
+L+N+YA A +W+DV + R+ + R L +TPGFSL+E + KV+ F+ DK PQ IYE
Sbjct: 408 VLANMYAKAQKWDDVAKIRTKLAERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYE 467
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
+ ++ +L+ GY+ D + V+ DVD EEK+ L+ HS+KLA
Sbjct: 468 MIHQMEWQLKFEGYIPDTSQVLLDVDDEEKKERLKFHSQKLAIAFGLIHTSEGSPLRITR 527
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCHT + IS + +REI VRD RFH+FK+G CSC DYW
Sbjct: 528 NLRMCSDCHTYTKYISMIYEREITVRDRLRFHHFKNGSCSCKDYW 572
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 168/342 (49%), Gaps = 22/342 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+D+ + F +N++I EAL + M + + P + T+P +K+CS L + G
Sbjct: 58 IDEPSSFDYNTMIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEG 117
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H F G DV V ++LI+MY KCGE+ +A +F+ + + +++ SW++++ +
Sbjct: 118 IQVHGHVFKMGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDE--KSVASWSAIIGAHA 175
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ E L+L G + V+ + +VLSAC+ + + + HG
Sbjct: 176 CVEMWNECLMLL-----------GKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHG 224
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+++ + V V +LID Y + G ++ +VF M EK+ ++ +I+ A +G E
Sbjct: 225 ILLRNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKE 284
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSI 331
AL VF +M++ + + V V A +H G++ G +C + +E +V +
Sbjct: 285 ALKVFSEMIEE-GLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCM 343
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRS----WTAMIAGYGMH 369
+D+ G+ + ++A+ +K +++ W ++++ +H
Sbjct: 344 VDLL---GRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVH 382
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + + N +S+ +I+ LA G EAL+ FS M + L P + +CS +
Sbjct: 259 KNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHAGLVE 318
Query: 91 SGKQAHQQ-AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
G Q + F V ++D+ + G L +A +L + + +++ W S+L+
Sbjct: 319 EGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVI-WRSLLS 377
Query: 150 G 150
Sbjct: 378 A 378
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/583 (40%), Positives = 336/583 (57%), Gaps = 53/583 (9%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG-----ELSDARKLFDEIPQRIRNIVS 143
LH KQAH G +D +++ +L+ Y+ + ++FD + R N+
Sbjct: 68 LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFV--RKPNVFL 125
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W M+ ++N+ +A+LL+ E ++ + + +VL ACS V
Sbjct: 126 WNCMIKVCIENNEPFKAILLYYEMMVA------------HFRPNKYTYPAVLKACSDAGV 173
Query: 204 NGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSI 260
V EG H ++K G + + ++ I YA G + +R++ D E DAV
Sbjct: 174 --VAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAV----- 226
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
+ + G EAL++F QM K ++ L +VL A A+LG L G+ IH +
Sbjct: 227 -CMPDRKGCFMEALEIFHQMQKE-KIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNS 284
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
++ ++GTS++DMY KCG++DLA + F +M K V SW AMI G MH RA +A+DLF
Sbjct: 285 IQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFS 344
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
KM + PN ITFV VL+AC+H GLVQ+G N+M E+ +EP +EHYGC+VDLLGRA
Sbjct: 345 KM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRA 401
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
G L EA ++ + + VWG+LLGACR H NV+LGE K L ELEP N G + LLS
Sbjct: 402 GLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLS 461
Query: 501 NIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVEL-RGKVHAFLVGDKEHPQHEKIYEYL 559
NIYA AGRWE+V R LMK R + TPG S+++L RG+VH F++GD HPQ + IY+ L
Sbjct: 462 NIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQML 521
Query: 560 EELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NL 601
+++ +LQ GY D + V+ D+D+EEKE + HSEKLA NL
Sbjct: 522 DKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNL 581
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
RVC DCH+ +LIS+V +REI+VRD R+H+F++G CSC D+W
Sbjct: 582 RVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 624
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 134/309 (43%), Gaps = 52/309 (16%)
Query: 50 RGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVF 109
R G +EAL F M+K + P + P + +C+ L L G+ H A D
Sbjct: 231 RKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGV 290
Query: 110 VSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLL 169
+ ++L+DMY+KCG + A ++F+++ + + SW +M+ G + A +A+ LF + +
Sbjct: 291 LGTSLVDMYAKCGRIDLAWEVFEKMSN--KEVSSWNAMIGGLAMHGRAEDAIDLFSKMDI 348
Query: 170 EESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTL 229
+E + VL+AC AHG ++++G + N++
Sbjct: 349 NPNE---------------ITFVGVLNAC-----------AHGGLVQKGLT----IFNSM 378
Query: 230 IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCN 289
Y +E + I+ + + GL EA +++V S +
Sbjct: 379 RKEYG---------------VEPQIEHYGCIVDLLGRAGLLTEA----EKVVSSIPTEPT 419
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
A+L A G + LG+ + +++++ + S T + ++Y K G+ + +
Sbjct: 420 PAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRY-TLLSNIYAKAGRWEEVGEVRK 478
Query: 350 QMKEKNVRS 358
MKE+ +++
Sbjct: 479 LMKERGIKT 487
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/631 (35%), Positives = 360/631 (57%), Gaps = 37/631 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++ ++ SWN+++A L G +EAL+ F R T ST+ I C+ L L
Sbjct: 218 METRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLA 277
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H GFH V +AL+D Y+K G+L A +F + +N+VSWT+M+ G +
Sbjct: 278 RQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVF-LLMSGSQNVVSWTAMIDGCI 336
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN + A LF D V + + +++L+ V+ H
Sbjct: 337 QNGDIPLAAALFSRM------------REDGVAPNDLTYSTILT----VSEASFPPQIHA 380
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
VIK ++ VG L+ +Y++ + + +F + +KD V+W++++ YAQ G
Sbjct: 381 QVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNG 440
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV-LRLGKCIHDQVIKMDLEESVIVGTSI 331
A + F +M +K N T+S+ + A A + LG+ H IK +++ V +++
Sbjct: 441 ATNAFIKMTMH-GLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSAL 499
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ MY + G ++ A+ F + ++++ SW +M++GY H +++ALD+F +M G+ +
Sbjct: 500 VSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDG 559
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+TF+SV+ C+HAGLV+EG + + M ++ I P ++HY CMVDL RAGKL E LIE
Sbjct: 560 LTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIE 619
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
GM A +W +LLGACR+HKNV+LG++AA+KL LEP + +VLLSNIY+ AG+W++
Sbjct: 620 GMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKE 679
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
+ R LM +++ K G S ++++ KVH F+ DK HP E+IY L + KL++ GY
Sbjct: 680 KDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGY 739
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
D + V HDV +++KE L +HSE+LA NLRV GD HTV+++
Sbjct: 740 CPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKM 799
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+S++ DREIV+RD RFH+FK G+CSCGD+W
Sbjct: 800 VSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 207/444 (46%), Gaps = 31/444 (6%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K NV +W S++ + G ++ + F MR + P TF + ++ + G+
Sbjct: 119 KRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQH 178
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H Q+ FG VFV ++L++MY+KCG + +AR +F + R++VSW +++ G V N
Sbjct: 179 VHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRM--ETRDMVSWNTLMAGLVLN 236
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
EAL LF + S +S + +S ++V++ C+ + G+ H V
Sbjct: 237 GRDLEALQLFHD-----------SRSSITMLTEST-YSTVINLCANLKHLGLARQLHSSV 284
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQNGLAAEA 273
+K GF S V L+DAY + G +D + VF M ++ V+W ++I QNG A
Sbjct: 285 LKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLA 344
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+F +M + V N +T S +L + IH QVIK + E + VGT+++
Sbjct: 345 AALFSRM-REDGVAPNDLTYSTILT----VSEASFPPQIHAQVIKTNYECTPTVGTALMV 399
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
Y K + A F + +K+V SW+AM+ Y A + F KM G++PN T
Sbjct: 400 SYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFT 459
Query: 394 FVSVLSAC-SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC----MVDLLGRAGKLKEAYD 448
S + AC S A V G + H +I+ C +V + R G ++ A
Sbjct: 460 ISSAIDACASPAAGVDLGRQF-----HAISIKHRCHDALCVSSALVSMYARKGSIENAQC 514
Query: 449 LIEGMKVKADFVVWGSLLGACRIH 472
+ E + D + W S+L H
Sbjct: 515 VFE-RQTDRDLLSWNSMLSGYAQH 537
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 174/348 (50%), Gaps = 24/348 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
IK C ++ D GKQ H G H D+ V ++L+DMY + D RK+F+ + +
Sbjct: 62 IKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLK-- 119
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
RN+V+WTS+LTGY+Q + + LF ++ V+ + +SVLS
Sbjct: 120 RNVVTWTSLLTGYIQAGVLLDVMSLFFRM------------RAEGVWPNPFTFSSVLSMV 167
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ + + + H IK G S V V N+L++ YA+ G V+ +R VF M +D V+WN
Sbjct: 168 ASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWN 227
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
+++A NG EAL +F +S+ T S V+ A+L L L + +H V+K
Sbjct: 228 TLMAGLVLNGRDLEALQLFHD-SRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLK 286
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALD 377
V T+++D Y K GQ+D A F M +NV SWTAMI G + A
Sbjct: 287 HGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAA 346
Query: 378 LFYKMIKAGVRPNYITFVSVLSACS-------HAGLVQEGWHWLNTMG 418
LF +M + GV PN +T+ ++L+ HA +++ + T+G
Sbjct: 347 LFSRMREDGVAPNDLTYSTILTVSEASFPPQIHAQVIKTNYECTPTVG 394
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 181/378 (47%), Gaps = 35/378 (9%)
Query: 133 EIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIA 192
+ P R + +++ G+V +AL F + + C G A+
Sbjct: 16 KFPTRTPWTMPFSTTWQGFVH-----QALDHFLDAHRRQGRCVGGG-----------ALL 59
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFD-SEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
++ C V + + H ++ G D ++ VG +L+D Y V RKVF+GM++
Sbjct: 60 GIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLK 119
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
++ VTW S++ Y Q G+ + + +F +M ++ V N T S+VL +A G++ LG+
Sbjct: 120 RNVVTWTSLLTGYIQAGVLLDVMSLFFRM-RAEGVWPNPFTFSSVLSMVASQGMVDLGQH 178
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
+H Q IK +V V S+++MY KCG V+ AR F +M+ +++ SW ++AG ++ R
Sbjct: 179 VHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGR 238
Query: 372 AREALDLFY---KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
EAL LF+ I Y T +++ + H GL ++ H ++ G
Sbjct: 239 DLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQ--------LHSSVLKHGFH 290
Query: 429 HYG----CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
YG ++D +AG+L +A D+ M + V W +++ C + ++ L +
Sbjct: 291 SYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSR 350
Query: 485 LFE--LEPNNCGYHVLLS 500
+ E + PN+ Y +L+
Sbjct: 351 MREDGVAPNDLTYSTILT 368
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 115/237 (48%), Gaps = 21/237 (8%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC-SALHDL 89
K +D+ +V SW++++ A+ GD A AF M L P T AI +C S +
Sbjct: 415 KMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGV 474
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
G+Q H + H + VSSAL+ MY++ G + +A+ +F+ Q R+++SW SML+
Sbjct: 475 DLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFER--QTDRDLLSWNSMLS 532
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
GY Q+ +++AL +F++ +E + +D + SV+ C+ + V EG
Sbjct: 533 GYAQHGYSQKALDVFRQMEVE------------GIDMDGLTFLSVIMGCAHAGL--VEEG 578
Query: 210 AHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
F V G + ++D Y+R G +D + + +GM W +++
Sbjct: 579 QQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLG 635
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/640 (35%), Positives = 354/640 (55%), Gaps = 70/640 (10%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
+L +F+ +++V S+N+VI+ A G AL F M+K L PT T + +C
Sbjct: 107 DLRVIFDNMPSRDSV-SYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNAC 165
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ L DL GKQ H + I +VFV +AL D+Y++CGE+ AR+LFD + IRN+V+
Sbjct: 166 TQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMV--IRNVVT 223
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W M++GY++N + + LF E + N+ D V +SVL A
Sbjct: 224 WNLMISGYLKNRQPEKCIDLFHEMQVS------------NLKPDQVTASSVLGA------ 265
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
Y + G++D +RKVF + EKD V W +I
Sbjct: 266 -----------------------------YIQAGYIDEARKVFGEIREKDEVCWTIMIVG 296
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
AQNG +AL +F +M+ + + + T+S+V+ + A L L G+ +H + M + +
Sbjct: 297 CAQNGKEEDALLLFSEMLLE-NARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVND 355
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
++V ++++DMYCKCG A F+ M+ +NV SW +MI GY ++ + EAL L+ M+
Sbjct: 356 DLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENML 415
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ ++P+ +TFV VLSAC HAGLV+EG + +M + +EP +HY CMV+L GR+G +
Sbjct: 416 EENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHM 475
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
+A DLI M + + ++W ++L C + ++ GE+AA+ L EL P N +++LSN+Y
Sbjct: 476 DKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMY 535
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A GRW+DV RSLMK++ + K +S +E+ +VH F+ D+ HP + I+ L L
Sbjct: 536 AARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLI 595
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------------NLRVC 604
KLQE G+ + V+HD ++EK ++ HSEKLA N+R C
Sbjct: 596 RKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTC 655
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH ++ +S + R +++RDS RFH+F +G CSC DYW
Sbjct: 656 ADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 187/399 (46%), Gaps = 70/399 (17%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
++H +F D F+ + L+++Y+K GE+S ARKLFDE+ QR + SW +ML+ Y +
Sbjct: 45 KSHMHLHLFK-PNDTFIHNRLLNLYAKSGEISHARKLFDEMTQR--DNFSWNAMLSLYAK 101
Query: 154 NDNAREALLLFKEFLLEES----------ECGGASENSDNVFV---------DSVAIASV 194
+ + ++F +S G + VF+ SV
Sbjct: 102 SGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSV 161
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
L+AC+++ + HG +I V V N L D YAR G +D +R++FD M+ ++
Sbjct: 162 LNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNV 221
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
VTWN +I+ Y +N + +D+F +M + +++K + VT S+VL A
Sbjct: 222 VTWNLMISGYLKNRQPEKCIDLFHEM-QVSNLKPDQVTASSVLGA--------------- 265
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
Y + G +D ARK F +++EK+ WT MI G + + +
Sbjct: 266 --------------------YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEED 305
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACS-----HAGLVQEGWHWLNTMGHEFNIEPGVEH 429
AL LF +M+ RP+ T SV+S+C+ + G V G +L + + +
Sbjct: 306 ALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSA--- 362
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+VD+ + G ++A+ + M+ + + V W S++G
Sbjct: 363 ---LVDMYCKCGVTRDAWTIFSTMQTR-NVVSWNSMIGG 397
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 180/361 (49%), Gaps = 25/361 (6%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N ++ YA+ G V+ R +FD M +D+V++N++I+ +A NG AL VF +M K +
Sbjct: 93 NAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKE-GL 151
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
K T +VL A L LR GK IH ++I +L +V V ++ D+Y +CG++D AR+
Sbjct: 152 KPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARR 211
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F++M +NV +W MI+GY + + + +DLF++M + ++P+ +T SVL A AG
Sbjct: 212 LFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGY 271
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM---KVKADFVVWG 463
+ E + + + + GC + GK ++A L M + D
Sbjct: 272 IDEARKVFGEIREKDEVCWTIMIVGC-----AQNGKEEDALLLFSEMLLENARPDGYTIS 326
Query: 464 SLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLS----NIYANAGRWEDVERTRSLM 519
S++ +C ++ G++ K F + N+ +L+S ++Y G D S M
Sbjct: 327 SVVSSCAKLASLYHGQVVHGKAFLMGVND---DLLVSSALVDMYCKCGVTRDAWTIFSTM 383
Query: 520 KNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVI 579
+ R ++V + + + ++ + +YE + E N+K V +V +++ +
Sbjct: 384 QTR--------NVVSWNSMIGGYALNGQD-LEALSLYENMLEENLKPDSVTFVGVLSACV 434
Query: 580 H 580
H
Sbjct: 435 H 435
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/664 (35%), Positives = 369/664 (55%), Gaps = 47/664 (7%)
Query: 7 SSVSSVVSNVDKHSTNTNLTT---LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
+ VS + +D + N +L +FN V++ V W +I +GG + +A+ F
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERT-VVVWTLMITRYVQGGCAGKAVELFLG 239
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG- 122
M + P T + +C+ G+Q H G D VS L+DMY+K
Sbjct: 240 MLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQM 299
Query: 123 --ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ-NDNAREALLLFKEFLLEESECGGASE 179
+ ARK+F +P N++SWT++++GYVQ A+ L E L E E
Sbjct: 300 EQSMECARKVFKRMP--THNVMSWTALISGYVQCGGQENNAVELLCEMLNESIE------ 351
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
+ + +S+L AC+ ++ H V+K + VGN L+ YA G +
Sbjct: 352 ------PNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCM 405
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+ +RK FD + E++ ++ +S I G + + ++S DV + T +++L A
Sbjct: 406 EEARKAFDQLYERNLLSTSSDI------GETGRSNASWSSQIESMDVGVSTFTFASLLSA 459
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRS 358
A +G+ G+ +H IK E + S++ MY +CG +D A +AF++M++ NV S
Sbjct: 460 AATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVIS 519
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
WT++I+ H A AL LF+ MI +GV+PN +T+++VLSACSH GLV+EG + +M
Sbjct: 520 WTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQ 579
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
+ + P +EHY CMVDLL R+G ++EA + I M KAD +VW +LLGACR ++N+++G
Sbjct: 580 KDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIG 639
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
EIAA+ + +LEP + +VLLSN+YA+ G W++V R RSLM++R L+K G S + +
Sbjct: 640 EIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNT 699
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
+H F GD HP+ ++IY L L +++++GYV D + V+HD+ + KE L HSEK+
Sbjct: 700 IHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKI 759
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVC DCH+ I+ ISK REI++RDS RFH KDG CSC
Sbjct: 760 AVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGKCSC 819
Query: 641 GDYW 644
G+YW
Sbjct: 820 GEYW 823
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 171/304 (56%), Gaps = 22/304 (7%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
D V+++L+ MYSKCG + AR++FD + + +R++VSWT+M +N +EAL+L E
Sbjct: 78 DALVANSLLTMYSKCGHVRAARRVFDGM-RGLRDLVSWTAMAFCLTRNGAEQEALVLLGE 136
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA-HGFVIKRGF-DSEVG 224
L S N F + + AC + + G GF IK GF ++V
Sbjct: 137 ML--------ESGLRPNAFT----LCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVS 184
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
VG LID +AR G + +RKVF+G++E+ V W +I Y Q G A +A+++F M++
Sbjct: 185 VGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLED- 243
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC---GQV 341
+ + T+S+++ A A G LG+ +H V+++ L V ++DMY K +
Sbjct: 244 GFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSM 303
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE--ALDLFYKMIKAGVRPNYITFVSVLS 399
+ ARK F +M NV SWTA+I+GY + C +E A++L +M+ + PN++T+ S+L
Sbjct: 304 ECARKVFKRMPTHNVMSWTALISGY-VQCGGQENNAVELLCEMLNESIEPNHLTYSSLLK 362
Query: 400 ACSH 403
AC++
Sbjct: 363 ACAN 366
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 240/509 (47%), Gaps = 37/509 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ ++ SW ++ L R G EAL M + L P T A +C
Sbjct: 101 VFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGE 160
Query: 88 DLH-SGKQAHQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
SG A GF DV V ALIDM+++ G+L ARK+F+ + + R +V WT
Sbjct: 161 LFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVE--RTVVVWT 218
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
M+T YVQ A +A+ LF L D D ++S++SAC+ G
Sbjct: 219 LMITRYVQGGCAGKAVELFLGML------------EDGFEPDGYTMSSMVSACAEQGSAG 266
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYAR---GGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ + H V++ G S+ V L+D Y + ++ +RKVF M + ++W ++I+
Sbjct: 267 LGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALIS 326
Query: 263 IYAQ-NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL 321
Y Q G A+++ +M+ + ++ N +T S++L A A+L G+ IH +V+K +
Sbjct: 327 GYVQCGGQENNAVELLCEMLNES-IEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSI 385
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK 381
+VG +++ MY + G ++ ARKAF+Q+ E+N+ S ++ I G R+ + +
Sbjct: 386 GNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETG---RSNASWSSQIE 442
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLL 437
+ GV + TF S+LSA + GL +G H +I+ G E +V +
Sbjct: 443 SMDVGV--STFTFASLLSAAATVGLPTKGQQL-----HALSIKTGFESDKGISNSLVSMY 495
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD--LGEIAAKKLFELEPNNCGY 495
R G L +A + M+ + + W S++ A H + + L L ++PN+ Y
Sbjct: 496 SRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTY 555
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRL 524
+LS E E RS+ K+ RL
Sbjct: 556 IAVLSACSHVGLVKEGKEYFRSMQKDHRL 584
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWNSIIAIYAQNGLAAEALDVF 277
D++ V N+L+ Y++ GHV +R+VFDGM +D V+W ++ +NG EAL +
Sbjct: 75 LDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLL 134
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLR-LGKCIHDQVIKMDL-EESVIVGTSIIDMY 335
+M++S ++ NA TL A A + R G + IK V VG ++IDM+
Sbjct: 135 GEMLES-GLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMF 193
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
+ G + ARK FN + E+ V WT MI Y A +A++LF M++ G P+ T
Sbjct: 194 ARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMS 253
Query: 396 SVLSACSHAG 405
S++SAC+ G
Sbjct: 254 SMVSACAEQG 263
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/636 (36%), Positives = 365/636 (57%), Gaps = 36/636 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F + +K+ + SWNS+++ + EA+ F M + P + + L
Sbjct: 323 VFGQIAEKDYI-SWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLS 381
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L++G++ H A H D+ V + L+DMY KCG + + K+F+ + IR+ +SWT++
Sbjct: 382 RLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMG--IRDHISWTTI 439
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
L + Q+ EAL E +LE + + + VDS+ I S+L C + +
Sbjct: 440 LACFAQSSRHSEAL----EMILELQK--------EGIMVDSMMIGSILETCCGLKSISLL 487
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H + I+ G + + N LID Y G D S +F + +KD V+W S+I N
Sbjct: 488 KQVHCYAIRNGLLDLI-LENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNN 546
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A+ +F +M K+ +++ ++V L ++L+AIA L L GK +H +I+ + V
Sbjct: 547 GRLNGAVFLFTEMQKA-NIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPV 605
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+S++DMY CG ++ A + F + K K+V WTAMI GMH ++A+DLF +M++ G+
Sbjct: 606 VSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGL 665
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P++++F+++L ACSH+ LV+EG H+L+ M ++ ++P EHY C+VD+LGR+G+ +EAY
Sbjct: 666 TPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAY 725
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ I+ M + VW +LLGACR+H+N L +AA KL ELEP+N G ++L+SN++A G
Sbjct: 726 EFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMG 785
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL- 566
+W + + TR+ M R L K P S +E+ +H F GD H E I+ L E+ L
Sbjct: 786 KWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLR 845
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+E GYV D V+HD +EEK L HSE++A NLRVCGDCH
Sbjct: 846 REGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCH 905
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+L+SK+ +R+IVVRD+ RFH+F G CSC D+W
Sbjct: 906 EFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 225/452 (49%), Gaps = 35/452 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT---PTRSTFPCAIKSCS 84
LFN + VFSWN+++ G + EA+R + +MR + P T +K+C
Sbjct: 117 LFNG-MPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACG 175
Query: 85 ALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
A D G + H A G + V++ALI MY+KCG L A ++F+ + Q R++ SW
Sbjct: 176 AEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASW 235
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
S+++G VQN EAL LF+ S ++S +VL C+ + +
Sbjct: 236 NSVVSGCVQNGRTLEALALFRGM------------QSAGFPMNSYTSVAVLQVCAELGLL 283
Query: 205 GVTEGAHGFVIKRGFDSEVGVG-NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ H ++K G SE+ + N L+ YA+ G VD + +VF + EKD ++WNS+++
Sbjct: 284 SLGRELHAALLKCG--SELNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSC 341
Query: 264 YAQNGLAAEALDVFDQMVK---STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
Y QN AEA+D F +M++ D C V+LS+ A+ HL L G+ H IK
Sbjct: 342 YVQNSFYAEAIDFFGEMLQHGFQPDHAC-VVSLSS---ALGHLSRLNNGREFHAYAIKQR 397
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
L + VG +++DMY KCG ++ + K F M ++ SWT ++A + R EAL++
Sbjct: 398 LHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMIL 457
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY---GCMVDLL 437
++ K G+ + + S+L C + L H + I G+ ++D+
Sbjct: 458 ELQKEGIMVDSMMIGSILETCCGLKSIS-----LLKQVHCYAIRNGLLDLILENRLIDIY 512
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G G+ + +L + ++ K D V W S++ C
Sbjct: 513 GECGEFDHSLNLFQRVE-KKDIVSWTSMINCC 543
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 220/439 (50%), Gaps = 33/439 (7%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
S ++ + L + GD +ALR ++ P R + + +A G+Q H A
Sbjct: 28 SASASLKRLCKEGDLRQALRQLTT----RAPPAREHYGWVLDLVAARRAAAEGRQVHAHA 83
Query: 100 FIFGF---HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G D F+++ L+ MY +CG + DAR+LF+ +P R + SW +++ Y+ + +
Sbjct: 84 VTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPA--RTVFSWNALVGAYLSSGS 141
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
A EA+ ++ + S G++ D +ASVL AC HG +K
Sbjct: 142 AGEAMRVYGA--MRASAAPGSAP-------DGCTLASVLKACGAEGDGRCGGEVHGLAVK 192
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE--KDAVTWNSIIAIYAQNGLAAEAL 274
G D V N LI YA+ G +D + +VF+ + + +D +WNS+++ QNG EAL
Sbjct: 193 VGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEAL 252
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+F M +S N+ T AVL A LG+L LG+ +H ++K E + I +++ M
Sbjct: 253 ALFRGM-QSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELN-IQCNALLVM 310
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y K G+VD A + F Q+ EK+ SW +M++ Y + EA+D F +M++ G +P++
Sbjct: 311 YAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACV 370
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIE----PGVEHYGCMVDLLGRAGKLKEAYDLI 450
VS+ SA H + G + H + I+ ++ ++D+ + G ++ + +
Sbjct: 371 VSLSSALGHLSRLNNGREF-----HAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVF 425
Query: 451 EGMKVKADFVVWGSLLGAC 469
E M ++ D + W ++L AC
Sbjct: 426 ESMGIR-DHISWTTIL-AC 442
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/636 (37%), Positives = 356/636 (55%), Gaps = 55/636 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTF-PCAIKSCSAL 86
+FN V K+ V W ++++ + A R S L+++ R CAIK+ L
Sbjct: 219 VFNGIVRKDAVV-WTAMVSCYSENDCPENAFRCAQSCSLLAISCARQGIHGCAIKT---L 274
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+D + H V AL+DMY+KCG++ DAR F+ IP +++ +
Sbjct: 275 ND----TEPH-------------VGGALLDMYAKCGDIKDARLAFEMIPYD--DVILLSF 315
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M++ Y Q++ +A LF + +V + +++SVL AC+ +
Sbjct: 316 MISRYAQSNQNEQAFELFLRLM------------RSSVLPNEYSLSSVLQACTNMVQLDF 363
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H IK G +S++ VGN L+D YA+ +D S K+F + + + V+WN+I+ ++Q
Sbjct: 364 GKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQ 423
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
+GL EAL VF +M ++ + C VT S+VL A A +R IH + K +
Sbjct: 424 SGLGEEALSVFCEM-QAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTV 482
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
+G S+ID Y KCG + A K F + E+++ SW A+I+GY +H +A +AL+LF +M K+
Sbjct: 483 IGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSN 542
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
V N ITFV++LS C GLV G ++M + I+P +EHY C+V LLGRAG+L +A
Sbjct: 543 VESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDA 602
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
I + +VW +LL +C IHKNV LG +A+K+ E+EP + +VLLSN+YA A
Sbjct: 603 LQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAA 662
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
G + V R M+N + K PG S VE++G++HAF VG +HP I LE LN+K
Sbjct: 663 GSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKT 722
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
GY+ D+ V+HDVD+E+K L +HSE+LA NLR C DCH
Sbjct: 723 SREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCH 782
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
T +ISK+V REI+VRD RFH+F+DG CSCGDYW
Sbjct: 783 TAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 191/413 (46%), Gaps = 46/413 (11%)
Query: 61 FSSMRKLSLTPTRSTFPCA--IKSCSALHDLHSGKQAHQQAFIFGF--HRDVFVSSALID 116
+S+ L P +F CA ++ C A D G+ H G D+F ++ L++
Sbjct: 45 LTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLN 104
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY K G L+ AR+LFD +P+R N+VS+ +++ + Q + A LF+ E E
Sbjct: 105 MYGKLGPLASARRLFDRMPER--NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE--- 159
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
V+ + ++L + G+ G H K G D VG+ LIDAY+
Sbjct: 160 ---------VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLC 210
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
V + VF+G++ KDAV W ++++ Y++N A +C S
Sbjct: 211 SLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAF------------RC---AQSCS 255
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
LLAI+ R G IH IK + VG +++DMY KCG + AR AF + +V
Sbjct: 256 LLAIS---CARQG--IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDV 310
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN- 415
+ MI+ Y + +A +LF +++++ V PN + SVL AC++ + G N
Sbjct: 311 ILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNH 370
Query: 416 --TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+GHE ++ G ++D + + + + ++ A+ V W +++
Sbjct: 371 AIKIGHESDLFVG----NALMDFYAKCNDMDSSLKIFSSLR-DANEVSWNTIV 418
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/574 (40%), Positives = 339/574 (59%), Gaps = 38/574 (6%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
KQ+H + G D F +S L+ S G + A +F ++ + + +M+ G
Sbjct: 5 KQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEP--GSFZFNTMMRG 62
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG- 209
+V++ N EAL+ +KE +E G V D+ ++L AC+R+ V EG
Sbjct: 63 HVKDMNTEEALITYKEM----AERG--------VKPDNFTYPTLLKACARLP--AVEEGM 108
Query: 210 -AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H ++K G +++V V N+LI Y + G + V VF+ M E+ +W+++I +A G
Sbjct: 109 QVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLG 168
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
+ ++ L + M + L +VL A HLG L LG+ +H +++ +VIV
Sbjct: 169 MWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVE 228
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
TS+I+MY KCG + F +M +KN S++ MI+G MH RE L +F +M++ G+
Sbjct: 229 TSLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLE 288
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+ I +V VL+ACSHAGLVQEG N M E IEP ++HYGCMVDL+GRAGK+ EA +
Sbjct: 289 PDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALE 348
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
LI+ M ++ + V+W SLL A ++H N+ GEIAAK+LF+L+ +V+LSN+YA A R
Sbjct: 349 LIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQR 408
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
WEDV RTR+ M ++ L++ PGFSLVE++ K+H F+ D HPQ E +YE L ++ +L+
Sbjct: 409 WEDVARTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKF 468
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
GY D T V+ DVD+EEK+ L HS+KLA NLR+C DCHT
Sbjct: 469 EGYXPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTY 528
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LIS + DREI VRD RFH+FKDG CSC DYW
Sbjct: 529 TKLISIIFDREITVRDRHRFHHFKDGACSCRDYW 562
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 167/341 (48%), Gaps = 16/341 (4%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ +D+ F +N+++ + ++ EAL + M + + P T+P +K+C+ L +
Sbjct: 46 RQMDEPGSFZFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVE 105
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G Q H G DVFV ++LI MY KCGE+ +F+++ + R++ SW++++T
Sbjct: 106 EGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNE--RSVASWSALITA 163
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
+ + L L G N + + SVLSAC+ + +
Sbjct: 164 HASLGMWSDCLRLL-----------GDMSNEGYWRAEESILVSVLSACTHLGALDLGRSV 212
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HGF+++ V V +LI+ Y + G + +F M +K+ ++++ +I+ A +G
Sbjct: 213 HGFLLRNVSGLNVIVETSLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYG 272
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGT 329
E L +F +M++ ++ + + VL A +H G+++ G +C + ++ +E ++
Sbjct: 273 REGLRIFTEMLEQ-GLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYG 331
Query: 330 SIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + G++D A + M E N W ++++ +H
Sbjct: 332 CMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVH 372
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/619 (37%), Positives = 345/619 (55%), Gaps = 48/619 (7%)
Query: 45 IADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS-CSALHDLHSGKQAHQQAFIFG 103
+A R GD A AF+S + T +T+ C + AL L + +
Sbjct: 73 VAAAVRRGDLTGAEEAFASTPR----KTTATYNCLLAGYARALGRLADARHLFDRIPT-- 126
Query: 104 FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
D + L+ + G+ AR+LF +P +R++VSW +M++G ++ EA +
Sbjct: 127 --PDAVSYNTLLSCHFASGDADGARRLFASMP--VRDVVSWNTMVSGLSKSGAVEEAKAV 182
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEV 223
F + S S N V A + +SA N +G +
Sbjct: 183 FLAMPVRNSV-------SWNAMVSGFACSRDMSAAEEWFRNAPEKG------------DA 223
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
+ ++ Y G+V + + F+ M ++ V+WN+++A Y +N A +AL +F MV+
Sbjct: 224 VLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVRE 283
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL 343
+V+ NA TLS+VLL ++L L GK IH +K+ L ++ VGTS++ MYCKCG +
Sbjct: 284 ANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSS 343
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
A K F +M ++V +W AMI+GY H +EA++LF +M GV PN+ITFV+VL+AC H
Sbjct: 344 ACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIH 403
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWG 463
GL G M + IEP V+HY CMVDLL RAGKL+ A DLI M + +G
Sbjct: 404 TGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYG 463
Query: 464 SLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRR 523
+LL ACR++KN++ E+AA KL E +P + G +V L+NIYA A +W+DV R R MK+
Sbjct: 464 TLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNA 523
Query: 524 LAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVD 583
+ KTPG+S +E++G +H F D+ HPQ I+E L +L +++ +GYV D+ V+HDVD
Sbjct: 524 VVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVD 583
Query: 584 QEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVR 625
+ K L HSEKLA NLRVCGDCH ++ISK+ DREI++R
Sbjct: 584 ETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILR 643
Query: 626 DSKRFHYFKDGLCSCGDYW 644
D+ RFH+F+ G CSCGDYW
Sbjct: 644 DTTRFHHFRGGHCSCGDYW 662
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 15/163 (9%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
N+ SWN+V+A + + +ALR F +M R+ ++ P ST + CS L L GKQ
Sbjct: 253 NLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQI 312
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
HQ R++ V ++L+ MY KCG+LS A KLF E+ R++V+W +M++GY Q+
Sbjct: 313 HQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEM--HTRDVVAWNAMISGYAQHG 370
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
+ +EA+ LF+ + V + + +VL+AC
Sbjct: 371 DGKEAINLFERM------------KDEGVEPNWITFVAVLTAC 401
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 1 MKLSKSSSV-SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
+ LS++ +V +S+VS K ++ LF + + +V +WN++I+ A+ GD EA+
Sbjct: 319 LPLSRNLTVGTSLVSMYCKCGDLSSACKLFGE-MHTRDVVAWNAMISGYAQHGDGKEAIN 377
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK--------QAHQQAFIFGFHRDVFVS 111
F M+ + P TF + +C +H+G + Q+ ++G V
Sbjct: 378 LFERMKDEGVEPNWITFVAVLTAC-----IHTGLCDFGIRCFEGMQE--LYGIEPRVDHY 430
Query: 112 SALIDMYSKCGELSDARKLFDEIP 135
S ++D+ + G+L A L +P
Sbjct: 431 SCMVDLLCRAGKLERAVDLIRSMP 454
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 242/635 (38%), Positives = 356/635 (56%), Gaps = 64/635 (10%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK-Q 94
+NV S N VI + R GD ALR F SM T T+ S A + GK +
Sbjct: 3 SNVISSNRVITNHIRSGDLNSALRVFESMT----VKTTVTW----NSMLAGYSNRRGKIK 54
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
+Q F D+F + ++ Y ++ AR FD++P +++ SW +M++G+ QN
Sbjct: 55 VARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMP--VKDTASWNTMISGFSQN 112
Query: 155 ---DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
D ARE L+ +SV+ +++S G E
Sbjct: 113 GMMDQARELFLVMP-------------------VRNSVSWNAMIS--------GYVESGD 145
Query: 212 GFVIKRGFD----SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ K+ F+ V +I + + G ++++ K F+ M K+ VTWN++IA Y +N
Sbjct: 146 LDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIEN 205
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
A L +F +MV+S + N +LS+VLL ++L L+LGK +H + K + ++
Sbjct: 206 CQAENGLKLFKRMVES-GFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITA 264
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
GTS++ MYCKCG ++ A K F M +K+V +W AMI+GY H +AL LF KM G+
Sbjct: 265 GTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGM 324
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+P++ITFV+VLSAC+HAG V G + N+M ++ +E +HY C+VDLLGR GKL EA
Sbjct: 325 KPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAV 384
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
DLI+ M K ++G+LLGACRIHKN++L E AAK L L+P + +V L+N+YA
Sbjct: 385 DLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMN 444
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RW+ V R MK+ ++ KTPG+S +E++ VH F GD+ HP+ I+E L EL K++
Sbjct: 445 RWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMR 504
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV D+ +HDV +E+K+ L HSEKLA NLRVCGDCH+
Sbjct: 505 LAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHS 564
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ IS + R I+VRD+ RFH+F+ G CSCGDYW
Sbjct: 565 ATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 28 LFNKYVDK---NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCS 84
L KY ++ N+ +WN++IA + L+ F M + P S+ + CS
Sbjct: 179 LAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCS 238
Query: 85 ALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
L L GKQ HQ ++ ++L+ MY KCG+L DA KLF +PQ +++V+W
Sbjct: 239 NLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQ--KDVVTW 296
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT-V 203
+M++GY Q+ +AL LF + + + D + +VLSAC+ V
Sbjct: 297 NAMISGYAQHGAGEKALYLFDKM------------RDEGMKPDWITFVAVLSACNHAGFV 344
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH----VDVSRKV 245
+ E + V G +++ ++D RGG VD+ +K+
Sbjct: 345 DLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKM 390
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/690 (34%), Positives = 367/690 (53%), Gaps = 99/690 (14%)
Query: 42 NSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
N+VI+ AR + A+ F S+ SL P +F + + L ++ A Q
Sbjct: 125 NAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCS 184
Query: 101 IF--GFHRDVFVSSALIDMYSKCGELS---DARKLFDEIPQR------------------ 137
+ G + VS+AL+ +Y KC L DARK+ DE+P +
Sbjct: 185 VLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDV 244
Query: 138 -----------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
++ V W +M++GYV + EA LF+ +LE V +
Sbjct: 245 GAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLER------------VPL 292
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFV--IKRGFDSEVG--VGNTLIDAYARGGHVDVS 242
D SVLSAC+ + HG + ++ F E V N L+ Y++ G++ V+
Sbjct: 293 DEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVA 352
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM---------------------- 280
R++FD M KD V+WN+I++ Y ++ +A++VF++M
Sbjct: 353 RRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSE 412
Query: 281 --------VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
+++ DVK T + + A LG L+ GK +H ++++ E S G ++I
Sbjct: 413 DALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALI 472
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
MY +CG V A F M + SW AMI+ G H REAL+LF +M+ G+ P+ I
Sbjct: 473 TMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRI 532
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
+F++VL+AC+H+GLV EG+ + +M +F I PG +HY ++DLLGRAG++ EA DLI+
Sbjct: 533 SFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKT 592
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M + +W ++L CR +++LG AA +LF++ P + G ++LLSN Y+ AGRW D
Sbjct: 593 MPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDA 652
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R R LM++R + K PG S +E KVH F+VGD +HP+ K+Y++LE + +++++GYV
Sbjct: 653 ARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYV 712
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D V+HD++ +KE L HSE+LA NLR+C DCH V+ +
Sbjct: 713 PDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVMMFM 772
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK V REIVVRD +RFH+FKDG CSCG+YW
Sbjct: 773 SKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 134/559 (23%), Positives = 226/559 (40%), Gaps = 120/559 (21%)
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+++L+ Y+ G L A FD +PQ R+ V ++++ Y + +A A+ +F+ L
Sbjct: 91 ATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLL-- 148
Query: 171 ESECGGASENSDNVFVDSVAIASVLSA-----CSRVTVNGVTEGAHGF------------ 213
G+ D F ++ A L C+++ + + GA G
Sbjct: 149 ---ASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYM 205
Query: 214 -------------VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSI 260
V+ D + T++ Y R G V +R VF+ + K V WN++
Sbjct: 206 KCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAM 265
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
I+ Y +G+ EA ++F +MV V + T ++VL A A+ G GK +H Q+ ++
Sbjct: 266 ISGYVHSGMVVEAFELFRRMVLER-VPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQ 324
Query: 321 ----LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA--------------- 361
E ++ V +++ +Y KCG + +AR+ F+ MK K+V SW
Sbjct: 325 PNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAV 384
Query: 362 ----------------MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS--- 402
M++GY + +AL LF +M V+P T+ +SAC
Sbjct: 385 EVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELG 444
Query: 403 --------HAGLVQEGWHWLNTMGHE-----------------FNIEPGVE--HYGCMVD 435
H LVQ G+ N+ G+ F + P ++ + M+
Sbjct: 445 SLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMIS 504
Query: 436 LLGRAGKLKEAYDLIEGM---KVKADFVVWGSLLGACRIHKNVDLGEI---AAKKLFELE 489
LG+ G +EA +L + M + D + + ++L AC VD G + K+ F +
Sbjct: 505 ALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGII 564
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG---------KVH 540
P Y L+ ++ AGR + R L+K TP L G H
Sbjct: 565 PGEDHYTRLI-DLLGRAGR---IGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAH 620
Query: 541 AFLVGDKEHPQHEKIYEYL 559
A K PQH+ Y L
Sbjct: 621 AADQLFKMTPQHDGTYILL 639
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 38/366 (10%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN++I+ G VEA F M + TF + +C+ GK H Q
Sbjct: 262 WNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQIT 321
Query: 101 I----FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
F + V++AL+ +YSKCG ++ AR++FD + + +++VSW ++L+GYV++
Sbjct: 322 RLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNM--KSKDVVSWNTILSGYVESSC 379
Query: 157 AREALLLFKEFLLEESEC----------GGASENSDNVFVDSVA---------IASVLSA 197
+A+ +F+E + GG SE++ +F A A +SA
Sbjct: 380 LDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISA 439
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C + + HG +++ GF+ GN LI YAR G V + +F M D+V+W
Sbjct: 440 CGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSW 499
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N++I+ Q+G EAL++FD+MV + + + ++ VL A H G++ G +
Sbjct: 500 NAMISALGQHGHGREALELFDRMV-AEGIYPDRISFLTVLTACNHSGLVDEGFQYFES-- 556
Query: 318 KMDLEESVIVG----TSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRA 372
M + +I G T +ID+ + G++ AR M E W A+++G CR
Sbjct: 557 -MKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSG----CRT 611
Query: 373 REALDL 378
++L
Sbjct: 612 SGDMEL 617
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 28/294 (9%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
MK S ++++S + S +F + KN + SW +++ GG S +AL+
Sbjct: 359 MKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNEL-SWMVMVSGYVHGGFSEDALKL 417
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F+ MR + P T+ AI +C L L GKQ H GF +ALI MY++
Sbjct: 418 FNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYAR 477
Query: 121 CGELSDARKLFDEIPQRIRNI--VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
CG + +A +F +P NI VSW +M++ Q+ + REAL LF + E
Sbjct: 478 CGAVKEANLMFLVMP----NIDSVSWNAMISALGQHGHGREALELFDRMVAE-------- 525
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF-VIKRGFDSEVGVGN--TLIDAYAR 235
++ D ++ +VL+AC+ + V EG F +KR F G + LID R
Sbjct: 526 ----GIYPDRISFLTVLTACNHSGL--VDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGR 579
Query: 236 GGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNG---LAAEALDVFDQMVKSTD 285
G + +R + M E W +I++ +G L A A D +M D
Sbjct: 580 AGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHD 633
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/659 (35%), Positives = 351/659 (53%), Gaps = 98/659 (14%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
+W+S+I+ R G VEAL F M+ P + T+ ++ CS L GKQ H A
Sbjct: 105 TWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHA 164
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
F + FV + L+DMY+KC + +A LF+ P + RN V WT+M+TGY QN + +
Sbjct: 165 IKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDK-RNHVLWTAMVTGYSQNGDGHK 223
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+ F++ E EC + S+L+AC ++ G HG +++ GF
Sbjct: 224 AIECFRDMRGEGIEC------------NQFTFPSILTACGSISACGFGAQVHGCIVRSGF 271
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+ V VG+ L+D Y++ G + +R++ + M D V+WNS+I + GL EAL +F
Sbjct: 272 GANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLF-- 329
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
I HL +++ + + +V +++DMY K G
Sbjct: 330 -------------------RIMHLRHMKIDEFTYPS----------LVNNALVDMYAKRG 360
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
D A F +M +K+V SWT+++ G + EAL LF +M G+ P+ I +VLS
Sbjct: 361 YFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLS 420
Query: 400 ACSHA--------GLVQE----------------------------GWHWLNTMGHEFNI 423
A ++ G +++ G + +M + I
Sbjct: 421 ALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDYFQSMEEVYGI 480
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
+PG EHY CM+DLLGR+GKL EA +L+ M V+ D VW +LL ACR+H NV+LGE AA
Sbjct: 481 KPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAAN 540
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
LFELEP N +VLLSN+Y+ AG+WE+ +TR LMK R ++K PG S +E+ KVH F+
Sbjct: 541 NLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFM 600
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
D+ HP+ +IY ++E+ + ++E GYV DM +HD+D+E KE+ L HSEKLA
Sbjct: 601 SEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFG 660
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCHT ++ +S V R +++RDS FH+F++G CSC DYW
Sbjct: 661 LLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 719
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 164/365 (44%), Gaps = 48/365 (13%)
Query: 106 RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
RD + +I Y+ G L++ARKLF E P IR+ ++W+S+++GY + EAL LF
Sbjct: 70 RDECSWNTMIGAYANSGRLNEARKLFYETP--IRSCITWSSLISGYCRYGCDVEALELFW 127
Query: 166 EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGV 225
E E G N SVL CS + + H IK FDS V
Sbjct: 128 EMQYE-----GERPN-------QFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFV 175
Query: 226 GNTLIDAYARGGHVDVSRKVFDGMIEK-DAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
L+D YA+ + + +F+ +K + V W +++ Y+QNG +A++ F M +
Sbjct: 176 VTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDM-RGE 234
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
++CN T ++L A + G +H +++ +V VG++++DMY KCG + A
Sbjct: 235 GIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNA 294
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R+ M+ + SW +MI G EAL LF M ++ + T+ S+++
Sbjct: 295 RRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVN----- 349
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGS 464
+VD+ + G A+D+ E M K D + W S
Sbjct: 350 --------------------------NALVDMYAKRGYFDYAFDVFEKMTDK-DVISWTS 382
Query: 465 LLGAC 469
L+ C
Sbjct: 383 LVTGC 387
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/554 (38%), Positives = 336/554 (60%), Gaps = 32/554 (5%)
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL 168
F + + S +S A ++F++I + NI +W +M+ G+ +++N A+ LF +
Sbjct: 70 FNKHLIFALVSLSAPMSFAAQIFNQI--QAPNIFTWNTMIRGFAESENPSPAVELFSQM- 126
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
+ ++ D+ + A +++ + EG H V++ GFDS V N+
Sbjct: 127 ----------HAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNS 176
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
L+ Y+ G + + +VF+ M +D V WNS+I +A NG+ EAL ++ +M S V+
Sbjct: 177 LVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREM-GSEGVEP 235
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+ T+ ++L A LG L LG+ +H ++K+ L ++ +++D+Y KCG A+K F
Sbjct: 236 DGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVF 295
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
++M+E++V SWT++I G ++ EAL LF ++ + G++P+ ITFV VL ACSH G++
Sbjct: 296 DEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLD 355
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
EG+++ M E+ I P +EH+GCMVDLL RAGK+ +AYD I M V + V+W +LLGA
Sbjct: 356 EGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGA 415
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
C IH +++LGE+A ++ LE + G VLLSN+YA+ RW DV+ R +M + + KTP
Sbjct: 416 CTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTP 475
Query: 529 GFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKE 588
G+SLVEL+ +V+ F++GD+ HPQ E+ Y L ++ L+ GYV +V+ D+++EEKE
Sbjct: 476 GYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEKE 535
Query: 589 MTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRF 630
L H+EK+A NLRVC DCH I+LISKV +REI+VRD RF
Sbjct: 536 TALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSRF 595
Query: 631 HYFKDGLCSCGDYW 644
H+FKDG CSC DYW
Sbjct: 596 HHFKDGSCSCKDYW 609
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 165/348 (47%), Gaps = 25/348 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSAL 86
+FN+ + N+F+WN++I A + A+ FS M S + P TFP K+ + L
Sbjct: 91 IFNQ-IQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKL 149
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D+ G+ H GF FV ++L+ MYS G A ++F+ + R R V+W S
Sbjct: 150 MDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDR--VAWNS 207
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ G+ N EAL L++E S+ V D + S+LSAC + +
Sbjct: 208 VINGFALNGMPNEALTLYREM------------GSEGVEPDGFTMVSLLSACVELGALAL 255
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
E H +++K G N L+D Y++ G+ ++KVFD M E+ V+W S+I A
Sbjct: 256 GERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAV 315
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NGL EAL +F ++ + +K + +T VL A +H G+L G + +M E ++
Sbjct: 316 NGLGNEALKLFGELERQ-GLKPSEITFVGVLYACSHCGMLDEG---FNYFRRMKEEYGIL 371
Query: 327 VGTS----IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ C+ G+V A M N W ++ +H
Sbjct: 372 PRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIH 419
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 241/656 (36%), Positives = 367/656 (55%), Gaps = 51/656 (7%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP 77
KH + ++F+ + N+FSWN +I+ A G AL F+ K+ + PT TF
Sbjct: 88 KHGSLCEARSIFDA-IQHKNIFSWNIIISAYAHRGHPSTALHLFA---KMDVPPTAMTFA 143
Query: 78 CAIKSCSALHDLHSGKQAHQQ-AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
A+ +CS+L DL G++ H + G V + +A+ MY+KCG+LS A+ +FD IP
Sbjct: 144 TALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPA 203
Query: 137 RIRNIVSWTSMLTGYVQNDNAR-EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+ N+VSW +++ Y Q+ ++ +AL LF++ +E G V VL
Sbjct: 204 K--NVVSWNALIAAYAQSGHSHHQALDLFEKM----AEHG--------VRPCRATFVGVL 249
Query: 196 SACSRVTVNGVTEGAHGFVIKRG--FD-SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK 252
AC+ VT E H +++ G FD +VGV N L++ YA+ G ++V+R +F M +
Sbjct: 250 GACNDVTS---LEKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRR 306
Query: 253 DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI 312
D V+ N +IA +AQ GL E++ VF +M + + T ++V+ A + G L GK I
Sbjct: 307 DQVSMNVMIATFAQQGLGKESIQVFREM-DLEGLPQDDTTFASVITACSCCGALEFGKRI 365
Query: 313 HDQVIKMDLE-----ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
H +V++ L +V+V T+++ MY KCG ++ A+ F M KN SW AM+A
Sbjct: 366 HKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACA 425
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+ EA GV + +F+SVL ACSH+G+++ + M +F++ P
Sbjct: 426 HQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAA 485
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
E+Y CMVDLL R+G+L +A +L+ M D + W +LLG CR+ +++ AA++ F
Sbjct: 486 ENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFN 545
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK-TPGFSLVELRGKVHAFLVGD 546
LEP N + LLS++Y+ G+ +++ RS MK R L K PG S++E+ G+VH F+ GD
Sbjct: 546 LEPQNTAPYTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGD 605
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
HPQ +KI L+ LNV+L++ G+V V+HD+ E+KE L +HSEKLA
Sbjct: 606 SSHPQIDKILRELDILNVELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLIS 665
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH I+LISK+ R I VRD+ RFH F+ G CSCGDYW
Sbjct: 666 TKSGIPLLVLKNLRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQSGTCSCGDYW 721
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 199/409 (48%), Gaps = 44/409 (10%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
+F AI+SC D +S HQ+ G ++++ L+ M +K G L +AR +FD I
Sbjct: 46 SFAAAIRSCK---DSNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAI 102
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
+NI SW +++ Y + AL LF + +V ++ A+
Sbjct: 103 QH--KNIFSWNIIISAYAHRGHPSTALHLFAKM---------------DVPPTAMTFATA 145
Query: 195 LSACSRVTVNGVTEGAHGFV-IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
LSACS + H + RG V + + YA+ G + ++ VFD + K+
Sbjct: 146 LSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKN 205
Query: 254 AVTWNSIIAIYAQNGLA-AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI 312
V+WN++IA YAQ+G + +ALD+F++M + C A T VL A + L I
Sbjct: 206 VVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRA-TFVGVLGACNDVTSLEK---I 261
Query: 313 HDQVIKMDLE---ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
H ++++ L+ V V ++++MY KCG +++AR F +M+ ++ S MIA +
Sbjct: 262 HARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQ 321
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
+E++ +F +M G+ + TF SV++ACS G ++ G H+ +EP +
Sbjct: 322 GLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRI-----HKRVVEPVLGR 376
Query: 430 YGC---------MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
C +V + G+ G L++A + + M K + V W ++L AC
Sbjct: 377 KCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTK-NSVSWNAMLAAC 424
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/645 (35%), Positives = 368/645 (57%), Gaps = 50/645 (7%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP 77
KH +F + DK+ V ++N+++ ++ G +AL+ F++MR+ +
Sbjct: 396 KHGLLAAARRVFLEMHDKDAV-TYNAMMMGCSKEGLHTQALQLFAAMRRAGYS------- 447
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
H LH + +H ++ +VFV+++L+D YSKC L D R+LFDE+P+R
Sbjct: 448 --------RHPLHLLQYSHSRSRSTSV-LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPER 498
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ VS+ ++ Y N A L LF+E + G + + A++LS
Sbjct: 499 --DNVSYNVIIAAYAWNQCAATVLRLFREM----QKLGFDRQ--------VLPYATMLSV 544
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
+ + + H ++ G SE +GN LID Y++ G +D ++ F EK A++W
Sbjct: 545 AGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISW 604
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
++I Y QNG EAL +F M + ++ + T S+++ A + L ++ LG+ +H +I
Sbjct: 605 TALITGYVQNGQHEEALQLFSDM-RRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLI 663
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ + SV G+ ++DMY KCG +D A + F++M E+N SW A+I+ Y + A+ A+
Sbjct: 664 RSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIK 723
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
+F M+ G P+ +TF+SVL+ACSH GL E + + M H+++I P EHY C++D L
Sbjct: 724 MFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTL 783
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GR G + ++ M KAD ++W S+L +CRIH N +L +AA KLF +EP + +V
Sbjct: 784 GRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYV 843
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
+LSNIYA AG+WED + +M++R + K G+S VE++ K+++F D P ++I +
Sbjct: 844 ILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKD 903
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
L+ L ++ + GY D+T +H VD E K +L+ HSE+LA
Sbjct: 904 ELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMK 963
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NL C DCH VI++ISK+V+R+I+VRDS+RFH+FKDG+CSCGDYW
Sbjct: 964 NLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 142/296 (47%), Gaps = 38/296 (12%)
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
H+++F + ++ YS G+L A+ LF P R N +WT M+ + +AL LF
Sbjct: 285 HKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHR--NATTWTIMMRAHAAAGRTSDALSLF 342
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT-EGAHGFVIKRGFDSEV 223
+ L E V D V + +VL+ + G T H F IK G D+ V
Sbjct: 343 RAMLGE------------GVIPDRVTVTTVLN------LPGCTVPSLHPFAIKFGLDTHV 384
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
V NTL+DAY + G + +R+VF M +KDAVT+N+++ ++ GL +AL +F M ++
Sbjct: 385 FVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRA 444
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL 343
+ L L + H + + +V V S++D Y KC +D
Sbjct: 445 GYSR----------------HPLHLLQYSHSRSRSTSV-LNVFVNNSLLDFYSKCDCLDD 487
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
R+ F++M E++ S+ +IA Y + A L LF +M K G + + ++LS
Sbjct: 488 MRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS 543
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/638 (37%), Positives = 368/638 (57%), Gaps = 41/638 (6%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ ++ + SWN++I L + G A+ + MR+ S+ P+ + SC+ L L
Sbjct: 442 QLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLA 501
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+G+Q H A +G + D VS+AL+ MY +CG +S+ ++F+ + ++VSW S++ G
Sbjct: 502 AGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAH--DVVSWNSIM-G 558
Query: 151 YVQNDNAR--EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
+ + A E++ +F + + + V + L+A + ++V + +
Sbjct: 559 VMASSQAPITESVQVFSNMM------------KSGLVPNKVTFVNFLAALTPLSVLELGK 606
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQN 267
H ++K G + V N L+ YA+ G VD ++F M +DA++WNS+I+ Y N
Sbjct: 607 QIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYN 666
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EA+D M+ S + + T S VL A A + L G +H ++ LE V+V
Sbjct: 667 GHLQEAMDCVCLMMHSEQMM-DHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVV 725
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++++DMY KCG++D A K F+ M +KN SW +MI+GY H R+AL++F +M ++G
Sbjct: 726 ESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGE 785
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+++TFVSVLSACSHAGLV+ G + M ++ I P +EHY C++DLLGRAG+L +
Sbjct: 786 SPDHVTFVSVLSACSHAGLVERGLDYFELM-EDYGILPRIEHYSCVIDLLGRAGELDKIQ 844
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKN---VDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
+ ++ M +K + ++W ++L AC+ K+ +DLG A++ L ELEP N +VL S +A
Sbjct: 845 EYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHA 904
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
GRWED + R+ MK + K G S V L VH F+ GD+ HP ++IYE L L
Sbjct: 905 AIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQ 964
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
K++ GYV V+HD+++E KE LR HSEKLA NLRVCGD
Sbjct: 965 KIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGD 1024
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CHT R IS++V R+I++RDS RFH+FKDG CSCGDYW
Sbjct: 1025 CHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 213/441 (48%), Gaps = 22/441 (4%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRK--LSLTPTRSTFPCAIKSC--SALHDLHSG 92
N SW +I+ G +A F +M + PT TF +++C S L
Sbjct: 130 NAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFA 189
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKC--GELSDARKLFDEIPQRIRNIVSWTSMLTG 150
Q H F + V +ALI MY C G A+++FD P +R++++W ++++
Sbjct: 190 VQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTP--VRDLITWNALMSV 247
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y + +A LF+ ++S G +++ F S+ A+ LS+CS G+ +
Sbjct: 248 YAKRGDAICTFTLFRAMQYDDS--GIELRPTEHTF-GSLITATYLSSCSL----GLLDQL 300
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA--IYAQNG 268
V+K G S++ VG+ L+ A+AR G +D ++ ++ G+ E++AVT N +IA + Q+G
Sbjct: 301 FVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHG 360
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVL-LAIAHLGVLRLGKCIHDQVIKMD-LEESVI 326
AA + + + + +V V LSA+ + A G LR G+ +H V++ + +
Sbjct: 361 EAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQG-LRKGREVHAHVLRAGHIYRKIA 419
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V +++MY KCG +D A + F M+ ++ SW +I + A+ + M +
Sbjct: 420 VSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNS 479
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+ P+ +S LS+C+ GL+ G L+ ++ + +V + G G++ E
Sbjct: 480 IGPSNFAAISGLSSCAGLGLLAAG-QQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSEC 538
Query: 447 YDLIEGMKVKADFVVWGSLLG 467
+++ M D V W S++G
Sbjct: 539 WEIFNSMSAH-DVVSWNSIMG 558
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 182/398 (45%), Gaps = 42/398 (10%)
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
S + H + G D+F+++ L++ Y+K L AR++FD +P RN VSWT +++G
Sbjct: 83 SPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPG--RNAVSWTCLISG 140
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN--GVTE 208
+V + +A LF+ L E C S SVL AC + G
Sbjct: 141 HVLSGLPEDAFPLFRAMLREGPGCRPT----------SFTFGSVLRACQDSGPDRLGFAV 190
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARG--GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
HG V K F S V N LI Y G ++++VFD +D +TWN+++++YA+
Sbjct: 191 QVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAK 250
Query: 267 NGLAAEALDVFDQM--------VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
G A +F M ++ T+ ++ ++A L+ LG+L + +V+K
Sbjct: 251 RGDAICTFTLFRAMQYDDSGIELRPTEHTFGSL-ITATYLSSCSLGLL---DQLFVRVLK 306
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
+ VG++++ + + G +D A+ + +KE+N + +IAG A ++
Sbjct: 307 SGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEI 366
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW--------HWLNTMGHEFNIEPGVEHY 430
F + N T+V +LSA + ++G H L GH I +
Sbjct: 367 FMG-ARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRA-GH---IYRKIAVS 421
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+V++ + G + +A + + M+ + D + W +++ A
Sbjct: 422 NGLVNMYAKCGAIDKACRVFQLMEAR-DRISWNTIITA 458
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 150/325 (46%), Gaps = 19/325 (5%)
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
A VL R + E H V+KRG ++ + N L+++YA+G +D +R+VFDGM
Sbjct: 69 ADVLLRGRRPGCDASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPG 128
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGK 310
++AV+W +I+ + +GL +A +F M++ + + T +VL A G RLG
Sbjct: 129 RNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGF 188
Query: 311 C--IHDQVIKMDLEESVIVGTSIIDMY--CKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
+H V K + + V ++I MY C G LA++ F+ +++ +W A+++ Y
Sbjct: 189 AVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVY 248
Query: 367 GMHCRAREALDLFYKMI--KAGV--RPNYITFVSV-----LSACSHAGLVQEGWHWLNTM 417
A LF M +G+ RP TF S+ LS+CS GL+ + + +
Sbjct: 249 AKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCS-LGLLDQLFVRVLKS 307
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
G ++ G +V R G L EA D+ G+K + + G + G +
Sbjct: 308 GCSSDLYVG----SALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAA 363
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNI 502
EI N Y VLLS I
Sbjct: 364 AEIFMGARDSAAVNVDTYVVLLSAI 388
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 37/252 (14%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + + SWNS+I+ G EA+ M TF + +C+++
Sbjct: 643 LFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVA 702
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G + H DV V SAL+DMYSKCG + A K+F + Q +N SW SM
Sbjct: 703 ALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQ--KNEFSWNSM 760
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY ++ R+AL +F+E ++ES G S D V SVLSACS
Sbjct: 761 ISGYARHGLGRKALEIFEE--MQES---GESP-------DHVTFVSVLSACS-------- 800
Query: 208 EGAHGFVIKRGFD-----SEVGV------GNTLIDAYARGGHVDVSRKVFDGM-IEKDAV 255
H +++RG D + G+ + +ID R G +D ++ M ++ + +
Sbjct: 801 ---HAGLVERGLDYFELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTL 857
Query: 256 TWNSIIAIYAQN 267
W +++ Q+
Sbjct: 858 IWRTVLVACQQS 869
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/620 (36%), Positives = 348/620 (56%), Gaps = 64/620 (10%)
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE---------- 123
S F ++SC L L GKQ H G +D F+S+ L++ YSK G+
Sbjct: 63 SLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSN 122
Query: 124 ---------------------LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
L A+KLFDE+ +R NI +W +M+ G Q + ++AL
Sbjct: 123 MPRRNVMSFNILINGYLQLGDLESAQKLFDEMSER--NIATWNAMIAGLTQFEFNKQALS 180
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE 222
LFKE D + SVL C+ + + H ++K GF+
Sbjct: 181 LFKEMY------------GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELS 228
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
VG++L Y + G + K+ M + V WN++IA AQNG E L+ ++ M+K
Sbjct: 229 SVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYN-MMK 287
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
+ + +T +VL A + L L G+ IH +VIK + V +S+I MY + G ++
Sbjct: 288 MAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLE 347
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
+ KAF + +V W++MIA YG H R EAL+LF++M + N +TF+S+L ACS
Sbjct: 348 DSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACS 407
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW 462
H+GL ++G + + M ++ ++P +EHY C+VDLLGRAG+L+EA +I M V+ D ++W
Sbjct: 408 HSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIW 467
Query: 463 GSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNR 522
+LL AC++HK ++ E ++++ +L+P + +VLLSNI+A+A W +V + R M++R
Sbjct: 468 KTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDR 527
Query: 523 RLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDV 582
+ K PG S +EL+ VH F +GDK HPQ+ +I YL+EL +L++ GYV ++ SV+HD+
Sbjct: 528 SVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDM 587
Query: 583 DQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVV 624
D EEKE L HSEK A NLRVC DCH I+ IS++ +REI+V
Sbjct: 588 DNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIV 647
Query: 625 RDSKRFHYFKDGLCSCGDYW 644
RD+ RFH+FKDG CSCG+YW
Sbjct: 648 RDASRFHHFKDGECSCGNYW 667
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 171/359 (47%), Gaps = 18/359 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ ++N + +WN++IA L + + +AL F M L P T ++ C+ L
Sbjct: 150 LFDEMSERN-IATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLR 208
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L +G++ H GF V S+L MY K G LSD KL +P IR +V+W ++
Sbjct: 209 SLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMP--IRTVVAWNTL 266
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G QN E L + + D + SVLSACS + G
Sbjct: 267 IAGKAQNGCPEEVLNQYNMMKMA------------GFRPDKITFVSVLSACSELATLGQG 314
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H VIK G S + V ++LI Y+R G ++ S K F D V W+S+IA Y +
Sbjct: 315 QQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFH 374
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESVI 326
G EAL++F QM + ++ N VT ++L A +H G+ G D ++ K L+ +
Sbjct: 375 GRGEEALELFHQM-EDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIE 433
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
T ++D+ + G+++ A M + + W ++A +H A A + ++IK
Sbjct: 434 HYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIK 492
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 176/401 (43%), Gaps = 71/401 (17%)
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH-- 238
+ ++ D + +L +C ++ + H +I G + + N L++ Y++ G
Sbjct: 55 TSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFK 114
Query: 239 -----------------------------VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
++ ++K+FD M E++ TWN++IA Q
Sbjct: 115 SSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEF 174
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
+AL +F +M + TL +VL A L L G+ +H ++K E S +VG+
Sbjct: 175 NKQALSLFKEMY-GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGS 233
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
S+ MY K G + K M + V +W +IAG + E L+ + M AG RP
Sbjct: 234 SLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRP 293
Query: 390 NYITFVSVLSACS-----------HAGLVQEGWH------------WLNTMGHEFNIEPG 426
+ ITFVSVLSACS HA +++ G + + E +I+
Sbjct: 294 DKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAF 353
Query: 427 VEH-------YGCMVDLLGRAGKLKEAYDL---IEGMKVKADFVVWGSLLGACR----IH 472
V+ + M+ G G+ +EA +L +E +K++A+ V + SLL AC
Sbjct: 354 VDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKE 413
Query: 473 KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
K + ++ KK ++L+P ++ + ++ AGR E+ E
Sbjct: 414 KGTEYFDLMVKK-YKLKP-RIEHYTCVVDLLGRAGRLEEAE 452
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 92/244 (37%), Gaps = 60/244 (24%)
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
+G +A D F ++++ + S +L + LG L GK +H +I +
Sbjct: 44 DGRIKQAYDTF-----TSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKF 98
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS---------------------------- 358
+ +++ Y K GQ + F+ M +NV S
Sbjct: 99 ISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERN 158
Query: 359 ---WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HA 404
W AMIAG ++AL LF +M G P+ T SVL C+ HA
Sbjct: 159 IATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHA 218
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGS 464
L++ G+ + +G + + ++G L + LI+ M ++ V W +
Sbjct: 219 CLLKCGFELSSVVG------------SSLAHMYIKSGSLSDGEKLIKSMPIRT-VVAWNT 265
Query: 465 LLGA 468
L+
Sbjct: 266 LIAG 269
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/654 (35%), Positives = 366/654 (55%), Gaps = 35/654 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
SS+V+ + K + +F+ +K+ V WNS+I + G E+++ F M L
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKD-VVCWNSIIGGYVQKGLFWESIQMFLEMIGGGL 242
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P+ T +K+C G AH G DVFV ++L+DMYS G+ A
Sbjct: 243 RPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAAL 302
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FD + R +++SW +M++GYVQN E+ LF+ L +S G DS
Sbjct: 303 VFDSMCSR--SLISWNAMISGYVQNGMIPESYALFRR--LVQSGSG----------FDSG 348
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
+ S++ CS+ + H +I++ +S + + ++D Y++ G + + VF M
Sbjct: 349 TLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRM 408
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+K+ +TW +++ +QNG A +AL +F QM + V N+VTL +++ AHLG L G
Sbjct: 409 GKKNVITWTAMLVGLSQNGYAEDALKLFCQM-QEEKVAANSVTLVSLVHCCAHLGSLTKG 467
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN-QMKEKNVRSWTAMIAGYGM 368
+ +H I+ ++ +++IDMY KCG++ A K FN + K+V +MI GYGM
Sbjct: 468 RTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGM 527
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H R AL ++ +MI+ ++PN TFVS+L+ACSH+GLV+EG ++M + ++ P +
Sbjct: 528 HGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHK 587
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HY C+VDL RAG+L+EA +L++ M + V +LL CR HKN ++G A +L L
Sbjct: 588 HYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISL 647
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
+ N G +V+LSNIYA A +WE V R LM+ + + K PG+SL+E+ KV+ F D
Sbjct: 648 DYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDS 707
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
HP IY+ LE L ++++ GY+ D + V+ DV++ K L HSE+LA
Sbjct: 708 HPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTP 767
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH V + ISK+V REI+VRD+ RFH+F +G CSC D+W
Sbjct: 768 CGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 238/465 (51%), Gaps = 26/465 (5%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N++IA R +E R F M + T A+K+C+ L D G + + A
Sbjct: 114 NAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVR 173
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
GFH ++V S++++ K G L+DA+K+FD +P+ +++V W S++ GYVQ E++
Sbjct: 174 RGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPE--KDVVCWNSIIGGYVQKGLFWESI 231
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
+F E + GG S V +A++L AC + + V AH +V+ G +
Sbjct: 232 QMFLEMI------GGGLRPS------PVTMANLLKACGQSGLKKVGMCAHSYVLALGMGN 279
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+V V +L+D Y+ G + VFD M + ++WN++I+ Y QNG+ E+ +F ++V
Sbjct: 280 DVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLV 339
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+S ++ TL +++ + L G+ +H +I+ +LE +++ T+I+DMY KCG +
Sbjct: 340 QSGS-GFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAI 398
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
A F +M +KNV +WTAM+ G + A +AL LF +M + V N +T VS++ C
Sbjct: 399 KQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCC 458
Query: 402 SHAGLVQEG----WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
+H G + +G H++ H + + + ++D+ + GK+ A L
Sbjct: 459 AHLGSLTKGRTVHAHFIR---HGYAFDAVIT--SALIDMYAKCGKIHSAEKLFNNEFHLK 513
Query: 458 DFVVWGSLLGACRIHKNVDLGEIAAKKLFE--LEPNNCGYHVLLS 500
D ++ S++ +H + ++ E L+PN + LL+
Sbjct: 514 DVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLT 558
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 187/374 (50%), Gaps = 17/374 (4%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K H Q + F+++ LI +YS G L AR +FD+ + +M+ G++
Sbjct: 64 KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCS--LPETAVCNAMIAGFL 121
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+N E LF+ S ++ ++S L AC+ + + V
Sbjct: 122 RNQQHMEVPRLFRMM------------GSCDIEINSYTCMFALKACTDLLDDEVGMEIIR 169
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++RGF + VG+++++ + G++ ++KVFDGM EKD V WNSII Y Q GL E
Sbjct: 170 AAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWE 229
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
++ +F +M+ ++ + VT++ +L A G+ ++G C H V+ + + V V TS++
Sbjct: 230 SIQMFLEMIGG-GLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLV 288
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY G A F+ M +++ SW AMI+GY + E+ LF +++++G +
Sbjct: 289 DMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSG 348
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
T VS++ CS ++ G L++ +E + +VD+ + G +K+A ++ G
Sbjct: 349 TLVSLIRGCSQTSDLENG-RILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQA-TIVFG 406
Query: 453 MKVKADFVVWGSLL 466
K + + W ++L
Sbjct: 407 RMGKKNVITWTAML 420
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 24/170 (14%)
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K IH Q+IK + + +I +Y G + AR F+Q AMIAG+ +
Sbjct: 64 KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----HAGL------VQEGWHWLNTMG 418
+ E LF M + N T + L AC+ G+ V+ G+H +G
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
MV+ L + G L +A + +GM K D V W S++G
Sbjct: 184 SS------------MVNFLVKRGYLADAQKVFDGMPEK-DVVCWNSIIGG 220
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 260/731 (35%), Positives = 385/731 (52%), Gaps = 139/731 (19%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LFN ++ N VF + S++ + D + + F M+ + P +P IKS
Sbjct: 56 LFNSTLNPN-VFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG--- 111
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK------------------ 129
+ G H G D FV +A+IDMY++ G + ARK
Sbjct: 112 --NGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169
Query: 130 ---------------LFDEIPQRI-----------------------------RNIVSWT 145
LFD +P+R R++VSW
Sbjct: 170 VSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWN 229
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS------ 199
+ML+GY QN A E L LF E + + + D +V+SACS
Sbjct: 230 AMLSGYAQNGLAEEVLRLFDEMV------------NAGIEPDETTWVTVISACSSRGDPC 277
Query: 200 ------------RVTVNGVTE----------GAHGFVIKRGFDSEVG------VGNTLID 231
++ +N G+ G +R FD E+G N +I
Sbjct: 278 LAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIG-AARRIFD-ELGAYRNSVTWNAMIS 335
Query: 232 AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
AY R G++D +R++F+ M ++ VTWNS+IA YAQNG +A A+++F +M+ + + + V
Sbjct: 336 AYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEV 395
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
T+ +V+ A HLG L LG + + + ++ S+ ++I MY +CG ++ A++ F +M
Sbjct: 396 TMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 455
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
++V S+ +I+G+ H EA++L M + G+ P+ +TF+ VL+ACSHAGL++EG
Sbjct: 456 ATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGR 515
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
++ +P ++HY CMVDLLGR G+L++A +E M ++ V+GSLL A RI
Sbjct: 516 KVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRI 570
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFS 531
HK V+LGE+AA KLFELEP+N G +LLSNIYA+AGRW+DVER R MK + KT G+S
Sbjct: 571 HKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWS 630
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTL 591
VE GK+H F+V D+ H + + IY+ L EL K++E GY+ D + V+ DV++EEKE +
Sbjct: 631 WVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIV 690
Query: 592 RIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF 633
HSEKLA NLRVC DCHT I++ISK+ R I+VRD+ RFH F
Sbjct: 691 GTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCF 750
Query: 634 KDGLCSCGDYW 644
DGLCSC DYW
Sbjct: 751 NDGLCSCKDYW 761
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/602 (38%), Positives = 340/602 (56%), Gaps = 43/602 (7%)
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSA------LIDMYSK 120
+S TP C S L S K +Q F V +++ + + S
Sbjct: 9 VSTTPENPLTKC----ISLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSL 64
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
+S A +F I N+ +W +++ GY ++DN A L +++ ++ E
Sbjct: 65 SAPMSYAYNVFTVIHNP--NVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVE------- 115
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
D+ +L A S+ E H I+ GF+S V V N+L+ YA G +
Sbjct: 116 -----PDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTE 170
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+ KVF+ M E+D V WNS+I +A NG EAL +F +M V+ + T+ ++L A
Sbjct: 171 SAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREM-SVEGVEPDGFTVVSLLSAS 229
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
A LG L LG+ +H ++K+ L ++ V S++D+Y KCG + A++ F++M E+N SWT
Sbjct: 230 AELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWT 289
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
++I G ++ EAL+LF +M G+ P+ ITFV VL ACSH G++ EG+ + M E
Sbjct: 290 SLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEE 349
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
I P +EHYGCMVDLL RAG +K+AY+ I+ M V+ + V+W +LLGAC IH ++ LGEI
Sbjct: 350 CGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEI 409
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
A L LEP + G +VLLSN+YA+ RW DV+ R M + KTPG+SLVEL +V+
Sbjct: 410 ARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVY 469
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA- 599
F +GD+ HPQ + +Y LE++ L+ GYV +V+ D+++EEKE L HSEK+A
Sbjct: 470 EFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAI 529
Query: 600 -----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
NLRVC DCH I+LI+K+ DREIV+RD RFH+F+ G CSC D
Sbjct: 530 AFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKD 589
Query: 643 YW 644
YW
Sbjct: 590 YW 591
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 164/342 (47%), Gaps = 23/342 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ NVF+WN++I A + A + M + P T+P +K+ S ++ G
Sbjct: 78 IHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREG 137
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H GF VFV ++L+ +Y+ CG+ A K+F+ + + R++V+W SM+ G+
Sbjct: 138 EAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKE--RDLVAWNSMINGFA 195
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N EAL LF+E +E E D + S+LSA + + + H
Sbjct: 196 LNGRPNEALTLFREMSVEGVE------------PDGFTVVSLLSASAELGALELGRRVHV 243
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+++K G V N+L+D YA+ G + +++VF M E++AV+W S+I A NG E
Sbjct: 244 YLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEE 303
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS-- 330
AL++F +M + + + +T VL A +H G+L G + +M E +I
Sbjct: 304 ALELFKEM-EGQGLVPSEITFVGVLYACSHCGMLDEG---FEYFRRMKEECGIIPRIEHY 359
Query: 331 --IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + G V A + M + N W ++ +H
Sbjct: 360 GCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIH 401
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 3 LSKSSSVS-SVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
LSK+S V+ S++ K +F++ ++N V SW S+I LA G EAL F
Sbjct: 250 LSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAV-SWTSLIVGLAVNGFGEEALELF 308
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSG----KQAHQQAFIFGFHRDVFVSSALIDM 117
M L P+ TF + +CS L G ++ ++ G + ++D+
Sbjct: 309 KEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEEC---GIIPRIEHYGCMVDL 365
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
S+ G + A + +P + N V W ++L
Sbjct: 366 LSRAGLVKQAYEYIQNMPVQ-PNAVIWRTLL 395
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/696 (35%), Positives = 381/696 (54%), Gaps = 90/696 (12%)
Query: 4 SKS-SSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
SKS SS +S+V+ + + LF++ D+N + SWN +++ + G+ EA + F
Sbjct: 45 SKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN-IISWNGLVSGYMKNGEIDEARKVFD 103
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHD--LHSGK---------------QAHQQAFIFGF- 104
L P R+ + S +AL +H+GK + + GF
Sbjct: 104 ------LMPERN-----VVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFL 152
Query: 105 ----------------HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
+D +++I K G + +AR++FDE+ +R ++++WT+M+
Sbjct: 153 QDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSER--SVITWTTMV 210
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
TGY QN+ +A +F + + E++E V+ S+L + NG E
Sbjct: 211 TGYGQNNRVDDARKIF-DVMPEKTE---------------VSWTSMLMGYVQ---NGRIE 251
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
A + N +I + G + +R+VFD M E++ +W ++I I+ +NG
Sbjct: 252 DAEELFEVMPVKPVIAC-NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNG 310
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
EALD+F M K V+ TL ++L A L L GK +H Q+++ + V V
Sbjct: 311 FELEALDLFILMQKQ-GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA 369
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-V 387
+ ++ MY KCG++ ++ F++ K++ W ++I+GY H EAL +F +M +G
Sbjct: 370 SVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGST 429
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+PN +TFV+ LSACS+AG+V+EG +M F ++P HY CMVD+LGRAG+ EA
Sbjct: 430 KPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAM 489
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
++I+ M V+ D VWGSLLGACR H +D+ E AKKL E+EP N G ++LLSN+YA+ G
Sbjct: 490 EMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQG 549
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD-KEHPQHEKIYEYLEELNVKL 566
RW DV R LMK R + K+PG S E+ KVHAF G HP+ E I + L+EL+ L
Sbjct: 550 RWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLL 609
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+E GY D + +HDVD+EEK +L+ HSE+LA NLRVC DCH
Sbjct: 610 REAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCH 669
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
T I++ISKV +REI++RD+ RFH+F++G CSC DYW
Sbjct: 670 TAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 216/472 (45%), Gaps = 64/472 (13%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH----- 96
N I L+R G EA + F S C KS S+ + + +G A+
Sbjct: 21 NVRITHLSRIGKIHEARKLFDS--------------CDSKSISSWNSMVAGYFANLMPRD 66
Query: 97 -QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
++ F R++ + L+ Y K GE+ +ARK+FD +P+ RN+VSWT+++ GYV N
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPE--RNVVSWTALVKGYVHNG 124
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
A LF + + E+++ + + + + AC +
Sbjct: 125 KVDVAESLFWK-MPEKNKVSWTV-----MLIGFLQDGRIDDACK--------------LY 164
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+ D + ++I + G VD +R++FD M E+ +TW +++ Y QN +A
Sbjct: 165 EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARK 224
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+FD M + T+ V+ +++L+ G + +++ ++ + VI ++I
Sbjct: 225 IFDVMPEKTE-----VSWTSMLMGYVQNGRIEDA----EELFEVMPVKPVIACNAMISGL 275
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
+ G++ AR+ F+ MKE+N SW +I + + EALDLF M K GVRP + T +
Sbjct: 276 GQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLI 335
Query: 396 SVLSACSHAGLVQEGWHWLNTMGH-EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
S+LS C+ + G + +F+++ V ++ + + G+L ++ + +
Sbjct: 336 SILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA--SVLMTMYIKCGELVKSKLIFDRFP 393
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL------EPNNCGYHVLLS 500
K D ++W S++ H LGE A K E+ +PN + LS
Sbjct: 394 SK-DIIMWNSIISGYASH---GLGEEALKVFCEMPLSGSTKPNEVTFVATLS 441
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 131/311 (42%), Gaps = 59/311 (18%)
Query: 213 FVIKRGFDSEVG--VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
+++R + + + N I +R G + +RK+FD K +WNS++A Y N +
Sbjct: 5 ILLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMP 64
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+A +FD+M + ++I
Sbjct: 65 RDARKLFDEMP----------------------------------------DRNIISWNG 84
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ Y K G++D ARK F+ M E+NV SWTA++ GY + + A LF+KM + N
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----N 140
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+++ +L G + + + + NI M+ L + G++ EA ++
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIA-----RTSMIHGLCKEGRVDEAREIF 195
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP--NNCGYHVLLSNIYANAGR 508
+ M ++ + W +++ + VD A+K+F++ P + +L Y GR
Sbjct: 196 DEMSERS-VITWTTMVTGYGQNNRVD----DARKIFDVMPEKTEVSWTSMLMG-YVQNGR 249
Query: 509 WEDVERTRSLM 519
ED E +M
Sbjct: 250 IEDAEELFEVM 260
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/619 (37%), Positives = 345/619 (55%), Gaps = 48/619 (7%)
Query: 45 IADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS-CSALHDLHSGKQAHQQAFIFG 103
+A R GD A AF+S + T +T+ C + AL L + +
Sbjct: 24 VAAAVRRGDLTGAEEAFASTPR----KTTATYNCLLAGYARALGRLADARHLFDRIPT-- 77
Query: 104 FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
D + L+ + G+ AR+LF +P +R++VSW +M++G ++ EA +
Sbjct: 78 --PDAVSYNTLLSCHFASGDADGARRLFASMP--VRDVVSWNTMVSGLSKSGAVEEAKAV 133
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEV 223
F + S S N V A + +SA N +G +
Sbjct: 134 FLAMPVRNSV-------SWNAMVSGFACSRDMSAAEEWFRNAPEKG------------DA 174
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
+ ++ Y G+V + + F+ M ++ V+WN+++A Y +N A +AL +F MV+
Sbjct: 175 VLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVRE 234
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL 343
+V+ NA TLS+VLL ++L L GK IH +K+ L ++ VGTS++ MYCKCG +
Sbjct: 235 ANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSS 294
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
A K F +M ++V +W AMI+GY H +EA++LF +M GV PN+ITFV+VL+AC H
Sbjct: 295 ACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIH 354
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWG 463
GL G M + IEP V+HY CMVDLL RAGKL+ A DLI M + +G
Sbjct: 355 TGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYG 414
Query: 464 SLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRR 523
+LL ACR++KN++ E+AA KL E +P + G +V L+NIYA A +W+DV R R MK+
Sbjct: 415 TLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNA 474
Query: 524 LAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVD 583
+ KTPG+S +E++G +H F D+ HPQ I+E L +L +++ +GYV D+ V+HDVD
Sbjct: 475 VVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVD 534
Query: 584 QEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVR 625
+ K L HSEKLA NLRVCGDCH ++ISK+ DREI++R
Sbjct: 535 ETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILR 594
Query: 626 DSKRFHYFKDGLCSCGDYW 644
D+ RFH+F+ G CSCGDYW
Sbjct: 595 DTTRFHHFRGGHCSCGDYW 613
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 15/163 (9%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
N+ SWN+V+A + + +ALR F +M R+ ++ P ST + CS L L GKQ
Sbjct: 204 NLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQI 263
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
HQ R++ V ++L+ MY KCG+LS A KLF E+ R++V+W +M++GY Q+
Sbjct: 264 HQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEM--HTRDVVAWNAMISGYAQHG 321
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
+ +EA+ LF+ + V + + +VL+AC
Sbjct: 322 DGKEAINLFERM------------KDEGVEPNWITFVAVLTAC 352
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 1 MKLSKSSSV-SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
+ LS++ +V +S+VS K ++ LF + + +V +WN++I+ A+ GD EA+
Sbjct: 270 LPLSRNLTVGTSLVSMYCKCGDLSSACKLFGE-MHTRDVVAWNAMISGYAQHGDGKEAIN 328
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK--------QAHQQAFIFGFHRDVFVS 111
F M+ + P TF + +C +H+G + Q+ ++G V
Sbjct: 329 LFERMKDEGVEPNWITFVAVLTAC-----IHTGLCDFGIRCFEGMQE--LYGIEPRVDHY 381
Query: 112 SALIDMYSKCGELSDARKLFDEIP 135
S ++D+ + G+L A L +P
Sbjct: 382 SCMVDLLCRAGKLERAVDLIRSMP 405
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/635 (36%), Positives = 352/635 (55%), Gaps = 37/635 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW ++++ GD +L F+ M + + P TF +K+C L+ L G
Sbjct: 430 MPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKG 489
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H GF V V ++L+DMYSKCG +++A K+F + R +++SW +M+ GYV
Sbjct: 490 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGR--SLISWNAMIAGYV 547
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
AL F G E D + S+L ACS + + HG
Sbjct: 548 HAGYGSRALATF----------GMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 597
Query: 213 FVIKRGF--DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
F+++ GF S + +L+D Y + G++ +RK FD + EK ++W+S+I YAQ G
Sbjct: 598 FLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDF 657
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA+ +F ++ + + ++ LS+++ A +L+ GK + V+K+ V S
Sbjct: 658 VEAMGLFKRL-QELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNS 716
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++DMY KCG VD A K F +M+ K+V SWT MI GYG H ++A+ +F KM++ + P+
Sbjct: 717 LVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPD 776
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+ +++VLSACSH+G+++EG + + I+P VEHY C+VDLLGRAG+LKEA L+
Sbjct: 777 EVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLV 836
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
+ M +K + +W +LL CR+H +++LG+ K L ++ N +V++SN+Y AG W
Sbjct: 837 DTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMSNLYGQAGYWN 896
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL-QEV 569
+ R L + L K G S VE+ +VH F G+ HP I E L+E+ +L +E+
Sbjct: 897 EQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTLVIQETLKEVERRLREEL 956
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------------NLRVCGDCH 608
GYV + +HD+D E KE LR HSEKLA NLRVC DCH
Sbjct: 957 GYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCH 1016
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
I+ +SK+ VVRD+ RFH F+DG CSCGDY
Sbjct: 1017 EFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 209/406 (51%), Gaps = 35/406 (8%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
++ S+ LIDMY KC E A K+FD +P+ RN+VSWT++++G+V N + +L LF E
Sbjct: 403 NLITSNYLIDMYCKCREQLIAYKVFDSMPE--RNVVSWTALMSGHVLNGDLNGSLSLFTE 460
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVG 224
++ + ++ L AC +N + +G HGF +K GF+ V
Sbjct: 461 M------------GRQGIYPNEFTFSTNLKACG--LLNALEKGLQIHGFCLKIGFEMMVE 506
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS- 283
VGN+L+D Y++ G ++ + KVF M+ + ++WN++IA Y G + AL F M ++
Sbjct: 507 VGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAK 566
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL--EESVIVGTSIIDMYCKCGQV 341
+ + TL+++L A + G++ GK IH +++ S + S++D+Y KCG +
Sbjct: 567 IKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNL 626
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
ARKAF+Q+KEK + SW+++I GY EA+ LF ++ + + + S++
Sbjct: 627 FSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVF 686
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEH--YGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
+ L+Q+G + + G+E +VD+ + G + EA M++K D
Sbjct: 687 ADFALLQQGKQMQALV---VKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLK-DV 742
Query: 460 VVWGSLLGACRIHKNVDLGEIAA---KKLFE--LEPNNCGYHVLLS 500
+ W ++ H LG+ A K+ +EP+ Y +LS
Sbjct: 743 ISWTVMITGYGKH---GLGKKAVSIFNKMLRHNIEPDEVCYLAVLS 785
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 22/264 (8%)
Query: 6 SSSVSSVVSNVDKHSTNTNLTTLFNKY--VDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
SS + S VD + NL + + + + + SW+S+I A+ GD VEA+ F
Sbjct: 607 PSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKR 666
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
+++LS I + L GKQ + VS++L+DMY KCG
Sbjct: 667 LQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGL 726
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ +A K F E+ ++++++SWT M+TGY ++ ++A+ +F + L N
Sbjct: 727 VDEAEKCFAEM--QLKDVISWTVMITGYGKHGLGKKAVSIFNKML------------RHN 772
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVD 240
+ D V +VLSACS + + EG F + +G V ++D R G +
Sbjct: 773 IEPDEVCYLAVLSACSHSGM--IKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLK 830
Query: 241 VSRKVFDGM-IEKDAVTWNSIIAI 263
++ + D M I+ + W +++++
Sbjct: 831 EAKHLVDTMPIKPNVGIWQTLLSL 854
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/615 (38%), Positives = 345/615 (56%), Gaps = 67/615 (10%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS--KCGELSDARKLFDEIPQR 137
++ CS + +L +Q H Q G D +S L+ + G L+ AR +FD I +
Sbjct: 25 LQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRP 81
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
N W +M+ GY + EALLL+ L +V ++ +L A
Sbjct: 82 --NTFMWNTMIRGYSNSKEPEEALLLYHHMLYH------------SVPHNAYTFPFLLKA 127
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
CS ++ + T+ H +IK GF SE+ N+L++ Y++ G + +R +FD + ++D V+W
Sbjct: 128 CSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSW 187
Query: 258 NSIIAIYAQNGLAAEALDVFDQM------------------------------VKSTDVK 287
NS+I Y + G A ++F+ M +++ +K
Sbjct: 188 NSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIK 247
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
+ V L + L A A LGVL GK IH + K ++E I+G +IDMY KCG ++ A +
Sbjct: 248 LDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEV 307
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F +M+EK V WTAMI+GY +H R REAL+ F KM AGV PN +TF +L+ACSHAGLV
Sbjct: 308 FRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLV 367
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
E +M +P +EHYGCMVDLLGRAG LKEA +LIE M VK + +WG+LL
Sbjct: 368 HEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLN 427
Query: 468 ACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKT 527
AC IH N++LG+ K L +++P + G ++ L++I+A AG W R R MK + ++K
Sbjct: 428 ACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKL 487
Query: 528 PGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEK 587
PG S++ + G H FL GD+ HPQ ++I LE++ +L+E GY + ++ D++ +EK
Sbjct: 488 PGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEK 547
Query: 588 EMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
E + HSEKLA NLRVC DCHTVI+LISKV REI++RD R
Sbjct: 548 ETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTR 607
Query: 630 FHYFKDGLCSCGDYW 644
FH FKDG C+CGDYW
Sbjct: 608 FHLFKDGNCTCGDYW 622
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 181/374 (48%), Gaps = 45/374 (12%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
T+F++ + + N F WN++I + + EAL + M S+ TFP +K+CS++
Sbjct: 73 TVFDR-IFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSM 131
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR--------- 137
+Q H GF +++ +++L+++YSK G++ AR LFD++ QR
Sbjct: 132 SASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMI 191
Query: 138 --------------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
RNI+SWTSM++G V +EAL LF
Sbjct: 192 DGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRM---------- 241
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
+ + +D+VA+ S L AC+ + V + H ++ K + + +G LID YA+ G
Sbjct: 242 --QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCG 299
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
++ + +VF M EK W ++I+ YA +G EAL+ F +M ++ V+ N +T + +L
Sbjct: 300 DLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKM-QTAGVEPNQMTFTGIL 358
Query: 298 LAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-N 355
A +H G++ K + + + ++ + S+ ++D+ + G + A + M K N
Sbjct: 359 TACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPN 418
Query: 356 VRSWTAMIAGYGMH 369
W A++ +H
Sbjct: 419 AAIWGALLNACHIH 432
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/651 (36%), Positives = 352/651 (54%), Gaps = 76/651 (11%)
Query: 54 SVEALRAFSSMRKLSLTPTRSTFPCAIKS-------CSALHDLHSGKQAHQQAFIFGFHR 106
S+ L ++++ L L P + P I S + L+ L G Q H + G
Sbjct: 45 SISPLTISATLQNL-LQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQP 103
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
V S ++ Y+ G++ + +F+ I + + + + SM+ Y + A + +
Sbjct: 104 TALVGSKMVAFYASSGDIDSSVSVFNGIGEP--SSLLFNSMIRAYARYGFAERTVATY-- 159
Query: 167 FLLEESECGGASENSDNVFVDSVAIASV-LSACSRVTVNGVTEGAHGFVIKRGFDSEVGV 225
F + G V SV + SV + C HG +++ G ++ V
Sbjct: 160 FSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKC-----------VHGLILRIGLQFDLYV 208
Query: 226 GNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY--------------------- 264
+LI Y + G ++ + KVFD M +D +WN+++A Y
Sbjct: 209 ATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI 268
Query: 265 ----------AQNGLAAEALDVFDQMVKS-TDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
+Q+GLA +AL +FD+MVK + V+ N VT+ +VL A A L L G+ IH
Sbjct: 269 VSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIH 328
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK--EKNVRSWTAMIAGYGMHCR 371
+ +M L + V ++ MY KCG + AR F+++ EKN+ +W MI Y +
Sbjct: 329 ELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGH 388
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
+A+ F +MI+AG++P+ ITF +LS CSH+GLV G + N M ++I P VEHY
Sbjct: 389 GLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYA 448
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPN 491
C+ DLLGRAG+L EA L+ M + A +WGSLL ACR H+N+++ E AA+KLF LEP
Sbjct: 449 CVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPE 508
Query: 492 NCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQ 551
N G +VLLSN+YA AGRW++V++ R+++K++ K+PG S +E+ GK H FL GD HPQ
Sbjct: 509 NTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQ 568
Query: 552 HEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------ 599
++IY +LE L K++ GY D + V+HD+ +EEKE L HSEKLA
Sbjct: 569 GKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAET 628
Query: 600 ------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCHT + IS++ RE++VRD RFH+FK G CSCGDYW
Sbjct: 629 VLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 178/385 (46%), Gaps = 49/385 (12%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++FN + +++ +NS+I AR G + + + SM T TFP +KS L
Sbjct: 126 SVFNGIGEPSSLL-FNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVEL 184
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR--------- 137
+ GK H G D++V+++LI +Y KCGE++DA K+FD + R
Sbjct: 185 LSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALL 244
Query: 138 --------------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
RNIVSWT+M++GY Q+ A++AL LF E + E+S
Sbjct: 245 AGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDS----- 299
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
V + V I SVL AC++++ H + G +S V L YA+ G
Sbjct: 300 -----GVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCG 354
Query: 238 HVDVSRKVFDGM--IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
+ +R FD + EK+ + WN++I YA G +A+ F +M+++ ++ + +T +
Sbjct: 355 SLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQA-GIQPDDITFTG 413
Query: 296 VLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
+L +H G++ +G K + + V + D+ + G++ A K +M
Sbjct: 414 LLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMP 473
Query: 355 NVRS-WTAMIAGYGMHCRAREALDL 378
S W +++A CR L++
Sbjct: 474 AGPSIWGSLLAA----CRKHRNLEM 494
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/675 (35%), Positives = 377/675 (55%), Gaps = 56/675 (8%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-- 67
+S+V+ K + + LF + + + +V SWN++IA + G+ AL F M K+
Sbjct: 263 NSLVTFYGKCGNLQHASQLFER-ISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEP 321
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
+ P R TF + + S L L G++ H F D ++++LI YSKC E+ A
Sbjct: 322 PVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKA 381
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R++F+ + +R+I+SW SML GY QN+ +FK +L E D
Sbjct: 382 REIFERL--LLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIE------------PD 427
Query: 188 SVAIASVLSACSRVTVNGVT----EGAHGFVIKRGFDSEVG--VGNTLIDAYARGGHVDV 241
S ++ + +A SR + + + HG++++R V V N ++ YA+ +
Sbjct: 428 SHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIAD 487
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ K+F GM +D+ +WN+++ Y++N + L +F ++K + V+LS +L +
Sbjct: 488 AEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQ-GFPLDHVSLSILLTSCG 546
Query: 302 HLGVLRLGKCIHDQVIKM------DLEESVI-VGTSIIDMYCKCGQVDLARKAFNQMKEK 354
L L+LGK H V K+ ++S++ + ++I MY KCG + A + F +M+ K
Sbjct: 547 RLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERK 606
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
+V SWTAMI G H A EAL LF +M G++PN +TF+++L AC+H GLVQEG ++
Sbjct: 607 DVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYF 666
Query: 415 NTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE-GMKVKADF-----VVWGSLLGA 468
++M +++ + P +EHY CM+DL GR+G+ A L+E G+ + + +W LLGA
Sbjct: 667 DSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGA 726
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
C K +DLG AA K+ ELEP + ++LL+N+YA++G WED + R M+++ L K
Sbjct: 727 CHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEV 786
Query: 529 GFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKE 588
G S ++ + H F+ GD HPQ ++IYE L +LN + +GYV V+HDVD+ EKE
Sbjct: 787 GCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVLHDVDETEKE 846
Query: 589 MTLRIHSEKLA-------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
L HSEKLA NLRVC DCH+ ++ S + REI++RDS+R
Sbjct: 847 AILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLLEKREILLRDSQR 906
Query: 630 FHYFKDGLCSCGDYW 644
FH F+DG CSCGDYW
Sbjct: 907 FHLFRDGSCSCGDYW 921
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/517 (26%), Positives = 250/517 (48%), Gaps = 36/517 (6%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
+ S+ S + + +H LF+ + +++ V SW+++IA +R G+ +A F M
Sbjct: 54 RCSACSKFLVSQSEHERLKCAQQLFDNFPNRD-VISWSALIAAYSRCGNFAQAFGLFQKM 112
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
L P + +K + ++ +Q H + GF D + +A I MYS+CG L
Sbjct: 113 MGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVL 172
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
DA+++FDE +I+ W S++ Y+ + E L LF + + + V
Sbjct: 173 EDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMV-----------SVGVV 221
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
+ ASV++AC HG +IK G ++ + N+L+ Y + G++ + +
Sbjct: 222 APTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEA-TNLWNSLVTFYGKCGNLQHASQ 280
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK-STDVKCNAVTLSAVLLAIAHL 303
+F+ + KD V+WN++IA Q G AL +F +M+K V+ N VT ++L A++ L
Sbjct: 281 LFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGL 340
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
LR G+ IH + ++ LE + S+I Y KC +V AR+ F ++ +++ SW +M+
Sbjct: 341 SALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSML 400
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH--AGLVQEGWHWLNTMGHEF 421
AGY + + D+F +M+ +G+ P+ + + +A S +GL+ G E
Sbjct: 401 AGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLI------YFRRGKEI 454
Query: 422 N------IEPG---VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL-GACRI 471
+ I PG + ++ + + ++ +A + +GMK + D W +++ G R
Sbjct: 455 HGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNR-DSYSWNAMMDGYSRN 513
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
K D+ I L + P + HV LS + + GR
Sbjct: 514 AKFEDVLMIFLDILKQGFPLD---HVSLSILLTSCGR 547
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/598 (39%), Positives = 354/598 (59%), Gaps = 46/598 (7%)
Query: 74 STFPCAIKSCSALHDLHSGKQAHQ-QAFIFGFH--RDVFVSSALIDMYSK---CGELSDA 127
+T+P ++ SC L S K+ Q QAF H D+ + + LI+ ++ + A
Sbjct: 23 TTYPSSLLSC--LPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYA 80
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
+LF+ IPQ +IV + SM GY +++ +A+ LF + L + N+ D
Sbjct: 81 HQLFEAIPQP--DIVLFNSMFRGYSRSNAPLKAISLFIKAL------------NYNLLPD 126
Query: 188 SVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
S+L AC V +G H IK G + V TLI+ YA VD +++V
Sbjct: 127 DYTFPSLLKAC--VVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRV 184
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD ++E V++N+II YA++ EAL +F Q+ ++ +K N VT+ +VL + A LG
Sbjct: 185 FDEILEPCVVSYNAIITGYARSSRPNEALSLFRQL-QARKLKPNDVTVLSVLSSCALLGA 243
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L LGK IH+ V K L++ V V T++IDMY KCG +D A F M ++ ++W+AMI
Sbjct: 244 LDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVA 303
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y MH + ++ + +F +M +A V+P+ ITF+ +L ACSH GLV EG+ + +M + I P
Sbjct: 304 YAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIP 363
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
G++HYGCMVDLLGRAG L EAY I+ + +K ++W +LL +C H N++L + ++
Sbjct: 364 GIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQI 423
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
EL+ ++ G +V+LSN+ A AG+WEDV+ R LM ++ K PG S +E+ VH F G
Sbjct: 424 LELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSG 483
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIH-DVDQEEKEMTLRIHSEKLA----- 599
D H ++ L+EL +L+ VGYV D + V+H D++ EEKE+TLR HSEKLA
Sbjct: 484 DGVHYVSTALHRALDELVKELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGL 543
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH+ +LIS ++DREI++RD +RFH+FKDG CSCGDYW
Sbjct: 544 LNTPPGTTIRVVKNLRVCGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 20/252 (7%)
Query: 38 VFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ 97
V S+N++I AR EAL F ++ L P T + SC+ L L GK H+
Sbjct: 193 VVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHE 252
Query: 98 QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA 157
G + V V++ALIDMY+KCG L A +F+ + +R+ +W++M+ Y +
Sbjct: 253 YVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESM--SVRDTQAWSAMIVAYAMHGQG 310
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
++ + +F+E + V D + +L ACS + V EG F
Sbjct: 311 QDVMSMFEEMARAK------------VQPDEITFLGLLYACSHTGL--VDEGFRYFYSMS 356
Query: 218 ---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAEA 273
G + ++D R G + + K D + I+ + W ++++ + +G A
Sbjct: 357 EVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELA 416
Query: 274 LDVFDQMVKSTD 285
V +Q+++ D
Sbjct: 417 KQVMNQILELDD 428
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/561 (39%), Positives = 338/561 (60%), Gaps = 35/561 (6%)
Query: 107 DVFVSSALIDMYSKCGE-LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
D+ + LI S+ L AR+LFD +PQR + +W+++++GY ++ AL L++
Sbjct: 93 DICSHNTLISALSRSPRHLPSARELFDRMPQR--DHFAWSALVSGYTRHGQPEAALALYR 150
Query: 166 EFLLEESECGGASENSDNVFVDSVAIASVLSA-CSRVTVNGVTEGAHGFVIKRGFDSEVG 224
E ++ +DN F S A+A+ +A C R H V++RG D+ G
Sbjct: 151 RMQEEP-----GNDGADNEFTASSALAAAAAARCGRAGRE-----LHCHVVRRGIDAAGG 200
Query: 225 ---VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+ + L D YA+ G VD +R+VFD M +DAV+W +++ Y G E +F M+
Sbjct: 201 DAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHML 260
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
++ V+ N T + VL A A V G+ +H ++ K +S ++++ MY KCG +
Sbjct: 261 RTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDM 320
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
A + F M + ++ SWTA+I+GY + + EAL F +++G++P+++TFV VLSAC
Sbjct: 321 GSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSAC 380
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+HAGLV +G +++ ++ IE +HY C++DLL R+G+ + A +I M VK + +
Sbjct: 381 AHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFL 440
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKN 521
W SLLG CRIHKNV L AA+ LFE+EP N +V L+NIYA+ G +++VE R +M++
Sbjct: 441 WASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMES 500
Query: 522 RRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHD 581
+ + K P S +E+ +VH FLVGDK HP+ ++IY L++L VK+ E GYV D+ V+HD
Sbjct: 501 KGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHD 560
Query: 582 VDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIV 623
V+ E+KE + HSE+LA NLR+CGDCH I+LIS++V R+I+
Sbjct: 561 VEDEQKEQDIGYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDII 620
Query: 624 VRDSKRFHYFKDGLCSCGDYW 644
VRDS RFH+FKDG+CSC DYW
Sbjct: 621 VRDSNRFHHFKDGICSCRDYW 641
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 24/256 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSAL 86
+F++ ++ V SW +++ GG E R F M R + P T+ +++C+
Sbjct: 224 VFDRMPVRDAV-SWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQF 282
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
G+Q H + G F SAL+ MYSKCG++ A ++F+ + + ++VSWT+
Sbjct: 283 AVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAK--PDLVSWTA 340
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV-TVNG 205
+++GY QN EAL F FL + D V VLSAC+ V+
Sbjct: 341 VISGYAQNGQPEEALRYFDMFL------------RSGIKPDHVTFVGVLSACAHAGLVDK 388
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA-- 262
E H + + +ID +R G + + K+ M ++ + W S++
Sbjct: 389 GLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGC 448
Query: 263 -IYAQNGL---AAEAL 274
I+ GL AAEAL
Sbjct: 449 RIHKNVGLARRAAEAL 464
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/637 (38%), Positives = 355/637 (55%), Gaps = 53/637 (8%)
Query: 29 FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD 88
K D++ +F N +IA R GD ALR F MR + S K S + +
Sbjct: 52 LTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMME 111
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
H Q F D F + ++ Y + A+ FD +P ++ SW +M+
Sbjct: 112 AH-------QLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP--FKDAASWNTMI 162
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
TGY + +A LF ++E++E V+ +++S + + +
Sbjct: 163 TGYARRGEMEKARELFYS-MMEKNE---------------VSWNAMISG--YIECGDLEK 204
Query: 209 GAHGFVIK--RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYA 265
+H F + RG V +I Y + V+++ +F M + K+ VTWN++I+ Y
Sbjct: 205 ASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYV 260
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+N + L +F M++ ++ N+ LS+ LL + L L+LG+ IH V K L V
Sbjct: 261 ENSRPEDGLKLFRAMLEE-GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDV 319
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
TS+I MYCKCG++ A K F MK+K+V +W AMI+GY H A +AL LF +MI
Sbjct: 320 TALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDN 379
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
+RP++ITFV+VL AC+HAGLV G + +M ++ +EP +HY CMVDLLGRAGKL+E
Sbjct: 380 KIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEE 439
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A LI M + V+G+LLGACR+HKNV+L E AA+KL +L N +V L+NIYA+
Sbjct: 440 ALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYAS 499
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
RWEDV R R MK + K PG+S +E+R KVH F D+ HP+ + I++ L+EL K
Sbjct: 500 KNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKK 559
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++ GY ++ +H+V++E+KE L HSEKLA NLR+CGDC
Sbjct: 560 MKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDC 619
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H I+ IS++ REI+VRD+ RFH+FKDG CSCGDYW
Sbjct: 620 HKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+F N+ +WN++I+ + L+ F +M + + P S A+ CS L
Sbjct: 238 AMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSEL 297
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G+Q HQ DV ++LI MY KCGEL DA KLF+ + + +++V+W +
Sbjct: 298 SALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK--KDVVAWNA 355
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV-TVNG 205
M++GY Q+ NA +AL LF+E + + + D + +VL AC+ VN
Sbjct: 356 MISGYAQHGNADKALCLFREMI------------DNKIRPDWITFVAVLLACNHAGLVNI 403
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
V + + ++D R G ++ + K+ M
Sbjct: 404 GMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/554 (38%), Positives = 336/554 (60%), Gaps = 32/554 (5%)
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL 168
F + + S +S A ++F++I + NI +W +M+ G+ +++N A+ LF +
Sbjct: 70 FNKHLIFALVSLSAPMSFAAQIFNQI--QAPNIFTWNTMIRGFAESENPSPAVELFSQM- 126
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
+ ++ D+ + A +++ + EG H V++ GFDS V N+
Sbjct: 127 ----------HAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNS 176
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
L+ Y+ G + + +VF+ M +D V WNS+I +A NG+ EAL ++ +M S V+
Sbjct: 177 LVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREM-GSEGVEP 235
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+ T+ ++L A LG L LG+ +H ++K+ L ++ +++D+Y KCG A+K F
Sbjct: 236 DGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVF 295
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
++M+E++V SWT++I G ++ EAL LF ++ + G++P+ ITFV VL ACSH G++
Sbjct: 296 DEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLD 355
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
EG+++ M E+ I P +EH+GCMVDLL RAGK+ +AYD I M V + V+W +LLGA
Sbjct: 356 EGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGA 415
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
C IH +++LGE+A ++ LE + G VLLSN+YA+ RW DV+ R +M + + KTP
Sbjct: 416 CTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTP 475
Query: 529 GFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKE 588
G+SLVEL+ +V+ F++GD+ HPQ E+ Y L ++ L+ GYV +V+ D+++EEKE
Sbjct: 476 GYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEKE 535
Query: 589 MTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRF 630
L H+EK+A NLRVC DCH I+LISKV +REI+VRD RF
Sbjct: 536 TALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSRF 595
Query: 631 HYFKDGLCSCGDYW 644
H+FKDG CSC DYW
Sbjct: 596 HHFKDGSCSCKDYW 609
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 166/348 (47%), Gaps = 25/348 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSAL 86
+FN+ + N+F+WN++I A + A+ FS M S + P TFP K+ + L
Sbjct: 91 IFNQ-IQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKL 149
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D+ G+ H GF FV ++L+ MYS G L A ++F+ + R R V+W S
Sbjct: 150 MDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDR--VAWNS 207
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ G+ N EAL L++E S+ V D + S+LSAC + +
Sbjct: 208 VINGFALNGMPNEALTLYREM------------GSEGVEPDGFTMVSLLSACVELGALAL 255
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
E H +++K G N L+D Y++ G+ ++KVFD M E+ V+W S+I A
Sbjct: 256 GERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAV 315
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NGL EAL +F ++ + +K + +T VL A +H G+L G + +M E ++
Sbjct: 316 NGLGNEALKLFGELERQ-GLKPSEITFVGVLYACSHCGMLDEG---FNYFRRMKEEYGIL 371
Query: 327 VGTS----IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ C+ G+V A M N W ++ +H
Sbjct: 372 PRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIH 419
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/575 (39%), Positives = 333/575 (57%), Gaps = 36/575 (6%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L G+Q H G V LI+ YSK + ++F+E ++ + +W+S++
Sbjct: 70 LLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERK--SSTTWSSVI 127
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
+ + QN+ A+ F ++ E+ C D++F + ++L C V +
Sbjct: 128 SSFAQNEEPVLAIQYFCR-MIGENLC-----PDDHIFPSATKACAILGRCD------VGK 175
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H VIK G+D +V VG++L+D YA+ G + +R VFD M ++ V+W+ +I Y Q G
Sbjct: 176 SVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLG 235
Query: 269 LAAEALDVFDQ-MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
EA+ +F + +++ DV N TLS+V+ +L LGK IH K + S V
Sbjct: 236 EHEEAMRLFKEALLEGLDV--NDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFV 293
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G+S+I +Y KCG ++ A + F+++ KN+ W AM+ H +EA DLF KM AG+
Sbjct: 294 GSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGM 353
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
RPN+ITF+ VL ACSHAGLV+EG + M ++ IEPG +HY MVDLLGRAGKL+EA
Sbjct: 354 RPNFITFLCVLYACSHAGLVEEGKKYFALM-KKYEIEPGTQHYASMVDLLGRAGKLQEAL 412
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+I+GM + VWG+ + CRIH N DL AA K+FEL + G HV+LSN YA AG
Sbjct: 413 SVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAG 472
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
R+ED + R ++++R + K G S +E +VH F GD+ H + ++IY+ LE+L +++
Sbjct: 473 RYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEME 532
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV D + V+ +V EEK T+R HSE+LA NLRVCGDCH
Sbjct: 533 RAGYVADTSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHN 592
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+ ISK+ R I+VRD+ RFH F+DG CSC DYW
Sbjct: 593 AIKFISKLSGRVIIVRDNNRFHRFEDGKCSCADYW 627
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 177/337 (52%), Gaps = 16/337 (4%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
++ + +W+SVI+ A+ + V A++ F M +L P FP A K+C+ L GK
Sbjct: 116 ERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGK 175
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H G+ DVFV S+L+DMY+KCG++ +AR +FDE+P RN+VSW+ M+ GY Q
Sbjct: 176 SVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPH--RNVVSWSGMIYGYTQ 233
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
EA+ LFKE LLE + V+ ++SV+ C T+ + + HG
Sbjct: 234 LGEHEEAMRLFKEALLE------------GLDVNDFTLSSVIRVCGSATLLELGKQIHGL 281
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
K +D VG++LI Y++ G ++ + +VFD + K+ WN+++ AQ+ EA
Sbjct: 282 CFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEA 341
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
D+F +M ++ ++ N +T VL A +H G++ GK + K ++E S++D
Sbjct: 342 FDLFTKM-ENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVD 400
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
+ + G++ A M + S W A I G +H
Sbjct: 401 LLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIH 437
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/588 (37%), Positives = 345/588 (58%), Gaps = 39/588 (6%)
Query: 53 DSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF-HRDVFVS 111
D L A +++ SL P + + +K C+ L + G+ H F + +
Sbjct: 67 DGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQ 126
Query: 112 SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
+ +++MY+KCG L DAR++FDE+P +++V+WT+++ G+ QN+ R+ALLLF + L
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMP--TKDMVTWTALIAGFSQNNRPRDALLLFPQMLRL- 183
Query: 172 SECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTL 229
G N ++S+L A + +G+ G H F +K G+ S V VG+ L
Sbjct: 184 ----GLQPNH-------FTLSSLLKASG--SEHGLDPGTQLHAFCLKYGYQSSVYVGSAL 230
Query: 230 IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCN 289
+D YAR GH+D ++ FDGM K V+WN++I+ +A+ G AL + +M + + +
Sbjct: 231 VDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK-NFQPT 289
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
T S+V A A +G L GK +H +IK L+ +G +++DMY K G +D A++ F+
Sbjct: 290 HFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFD 349
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
++ + +V SW M+ G H +E LD F +M++ G+ PN I+F+ VL+ACSH+GL+ E
Sbjct: 350 RLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDE 409
Query: 410 GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G ++ M ++ +EP V HY VDLLGR G L A I M ++ VWG+LLGAC
Sbjct: 410 GLYYFELM-KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGAC 468
Query: 470 RIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPG 529
R+HKN++LG AA++ FEL+P++ G +LLSNIYA+AGRW DV + R +MK + K P
Sbjct: 469 RMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPA 528
Query: 530 FSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEM 589
S VE+ VH F+ D+ HPQ ++I EE++ K++E+GYV D + V+ VDQ+E+E
Sbjct: 529 CSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREE 588
Query: 590 TLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVD 619
L+ HSEKLA N+RVCGDCH I+ +SK+ +
Sbjct: 589 KLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKIYE 636
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 172/343 (50%), Gaps = 17/343 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ K+ V +W ++IA ++ +AL F M +L L P T +K+ + H
Sbjct: 145 MFDEMPTKDMV-TWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEH 203
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G Q H +G+ V+V SAL+DMY++CG + A+ FD +P ++ VSW ++
Sbjct: 204 GLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP--TKSEVSWNAL 261
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G+ + AL L + N +SV SAC+ +
Sbjct: 262 ISGHARKGEGEHALHLLWKM------------QRKNFQPTHFTYSSVFSACASIGALEQG 309
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H +IK G +GNTL+D YA+ G +D +++VFD +++ D V+WN+++ AQ+
Sbjct: 310 KWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQH 369
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL E LD F+QM++ ++ N ++ VL A +H G+L G + + K +E V
Sbjct: 370 GLGKETLDRFEQMLR-IGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPH 428
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+ +D+ + G +D A + +M E W A++ MH
Sbjct: 429 YVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMH 471
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/626 (37%), Positives = 349/626 (55%), Gaps = 48/626 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SWNS+++ GD + +L F M +L R A+ +CS H L SG + H
Sbjct: 189 DLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIH 248
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Q D+ V ++LIDMY KCG++ A ++F+ I + NIV+W +M+
Sbjct: 249 CQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSK--NIVAWNAMI-------- 298
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
GG E+ D V D + + ++L +CS+ + HGF I+
Sbjct: 299 ------------------GGMQED-DKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIR 339
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
+ F + + L+D Y + G + ++ VF+ M EK+ V+WN+++A Y QN EAL +
Sbjct: 340 KMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKM 399
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F Q + + +K +A+T+++VL A+A L GK IH ++K+ L + + +I+ MY
Sbjct: 400 F-QHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYA 458
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG + AR+ F+ M K+V SW MI Y +H R ++ F +M G +PN TFVS
Sbjct: 459 KCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVS 518
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+L+ACS +GL+ EGW + N+M E+ I+PG+EHYGCM+DLLGR G L EA IE M +
Sbjct: 519 LLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLV 578
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
+WGSLL A R H +V L E+AA+ + L+ +N G +VLLSN+YA AGRWEDV+R +
Sbjct: 579 PTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIK 638
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
LMK + L KT G S+V++ G+ +F+ D+ H IY+ L+ L K+ E Y+ +T
Sbjct: 639 YLMKEQGLVKTVGCSMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLHSLT 698
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
+++ + HS KLA N R+C DCH + IS+V
Sbjct: 699 KFRPLDVAKKRGNSPEYHSVKLAICFGLISTAIGNPVIVRKNTRICDDCHRAAKKISQVT 758
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
REIVV D+K FH+F+DG CSC DYW
Sbjct: 759 KREIVVGDAKVFHHFRDGCCSCRDYW 784
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/449 (29%), Positives = 219/449 (48%), Gaps = 33/449 (7%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N +F K ++ ++ F WN +I G EA+ + M + TFP IK+C
Sbjct: 76 NALDMFEK-MNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKAC 134
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
L L G++ H + GF DV+V + LIDMY K G + A K+FDE+P +R++VS
Sbjct: 135 GELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMP--VRDLVS 192
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W SM++GY + + +L+ FKE L ++ D + S L ACS
Sbjct: 193 WNSMVSGYQIDGDGLSSLMCFKEMLRLGNK------------ADRFGMISALGACSIEHC 240
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
H VI+ + ++ V +LID Y + G VD + +VF+ + K+ V WN++I
Sbjct: 241 LRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIG- 299
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
M + V + +T+ +L + + G L GK IH I+
Sbjct: 300 ---------------GMQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLP 344
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+++ T+++DMY KCG++ LA FNQM EKN+ SW M+A Y + + +EAL +F ++
Sbjct: 345 YLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHIL 404
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
++P+ IT SVL A + EG +++ + + +V + + G L
Sbjct: 405 NEPLKPDAITIASVLPAVAELASRSEGKQ-IHSYIMKLGLGSNTFISNAIVYMYAKCGDL 463
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ A + +GM K D V W +++ A IH
Sbjct: 464 QTAREFFDGMVCK-DVVSWNTMIMAYAIH 491
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 178/355 (50%), Gaps = 40/355 (11%)
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
+ + G + +A +F+++ + W ++ GY N +EA+ + EC G
Sbjct: 68 FVESGLMGNALDMFEKMNHS--DTFIWNVIIRGYTNNGLFQEAIDFYYRM-----ECEG- 119
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
+ D+ V+ AC + V + HG +IK GFD +V V N LID Y + G
Sbjct: 120 ------IRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIG 173
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
++++ KVFD M +D V+WNS+++ Y +G +L F +M++ + K + + + L
Sbjct: 174 FIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGN-KADRFGMISAL 232
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A + LR G IH QVI+ +LE ++V TS+IDMY KCG+VD A + FN++ KN+
Sbjct: 233 GACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIV 292
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
+W AMI G + V P+ IT +++L +CS +G + EG
Sbjct: 293 AWNAMIGGMQEDDK---------------VIPDVITMINLLPSCSQSGALLEGKSI---- 333
Query: 418 GHEFNIE----PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
H F I P + +VD+ G+ G+LK A + M K + V W +++ A
Sbjct: 334 -HGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEK-NMVSWNTMVAA 386
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/645 (38%), Positives = 361/645 (55%), Gaps = 57/645 (8%)
Query: 30 NKYVDKNNVF---------SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS--TFPC 78
N+ VD N+F SWNS+I+ GD A++ F M P RS ++
Sbjct: 80 NRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEM------PERSVVSWTA 133
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
+ C + ++ Q + +D+ +A++ Y + G++ DA KLF ++P++
Sbjct: 134 MVNGCFRFGMVDQAERLFCQMPV----KDIAAWNAMVHGYLQFGKVDDALKLFKQMPRK- 188
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
N++SWT+M+ G QN+ + EAL LFK L C S S V++AC
Sbjct: 189 -NVISWTTMICGLDQNERSGEALNLFKNML----RCCIKS--------TSRTFTCVITAC 235
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ + HGF+IK GF E V +LI YA + SRKVF M+ + W
Sbjct: 236 ANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWT 295
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
++++ Y+ N +AL+VF +M++++ + N T ++ L + + LG L GK IH +K
Sbjct: 296 ALLSGYSLNRKHEDALNVFSEMIRNSILP-NQSTFASGLNSCSALGTLDWGKEIHGVAVK 354
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
+ L VG S++ MY G V+ A F ++ +K++ SW ++I G H R + A +
Sbjct: 355 LGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN-IEPGVEHYGCMVDLL 437
F +MI+ P+ ITF +LSACSH G +Q+G + N I+ ++HY CMVD+L
Sbjct: 415 FGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDIL 474
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GR G+LKEA LIE M VK + +VW +LL ACR+H +VD GE AA +F L+ + +V
Sbjct: 475 GRCGELKEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYV 534
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
LLSNIYA+AGRW V + R MK + + K PG S V +RGK H F GD+ P +I+E
Sbjct: 535 LLSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGDR--PHCLRIFE 592
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
LE L KL+E+GYV D S +HDV+ E+KE L HSE+LA
Sbjct: 593 KLEFLREKLKELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSTVTVMK 652
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHTVI+LIS+VV +IV+RD RFH+FK+G+CSCGDYW
Sbjct: 653 NLRVCEDCHTVIKLISRVVGCKIVLRDPTRFHHFKNGMCSCGDYW 697
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 190/397 (47%), Gaps = 31/397 (7%)
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
V + + +I Y++ L DA LFDE+P +R++VSW SM++G V+ + A+ +F E
Sbjct: 66 VSLYTKMISGYTRSNRLVDALNLFDEMP--LRDVVSWNSMISGCVECGDIDTAVKMFDE- 122
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN 227
+ E S V+ ++++ C R G+ + A + ++ N
Sbjct: 123 MPERS---------------VVSWTAMVNGCFRF---GMVDQAERLFCQMPV-KDIAAWN 163
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
++ Y + G VD + K+F M K+ ++W ++I QN + EAL++F M++ +K
Sbjct: 164 AMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCC-IK 222
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
+ T + V+ A A+ +G +H +IK V S+I +Y C + + +RK
Sbjct: 223 STSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKV 282
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F +M + V WTA+++GY ++ + +AL++F +MI+ + PN TF S L++CS G +
Sbjct: 283 FGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTL 342
Query: 408 QEGWHWLNTMGHEFNIEPGVEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
G G + G + +V + +G + +A + + K V W S+
Sbjct: 343 DWG---KEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEI-FKKSIVSWNSI 398
Query: 466 LGACRIHKNVDLGEIAAKKLFEL--EPNNCGYHVLLS 500
+ C H + ++ L EP+ + LLS
Sbjct: 399 IVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 128/282 (45%), Gaps = 41/282 (14%)
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+ EV + N L++ +D +R+VFD + + +I+ Y ++ +AL++FD+
Sbjct: 37 NREVLICNHLLNR-----RLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDE 91
Query: 280 M----------VKSTDVKC----NAVTL-------SAVLLAIAHLGVLRLGKCIHDQVIK 318
M + S V+C AV + S V G R G + DQ +
Sbjct: 92 MPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFG--MVDQAER 149
Query: 319 MDLE---ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+ + + + +++ Y + G+VD A K F QM KNV SWT MI G + R+ EA
Sbjct: 150 LFCQMPVKDIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEA 209
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV--EHY--G 431
L+LF M++ ++ TF V++AC++A G T H F I+ G E Y
Sbjct: 210 LNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMG-----TQVHGFIIKSGFLYEEYVTA 264
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
++ L + +++ + G V VW +LL +++
Sbjct: 265 SLITLYANCKRTEDSRKVF-GEMVHEKVAVWTALLSGYSLNR 305
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
++D AR+ F+Q+ +V +T MI+GY R +AL+LF +M V +++ S++S
Sbjct: 50 RLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDV----VSWNSMIS 105
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
C G + + M E V + MV+ R G + +A L M VK D
Sbjct: 106 GCVECGDIDTAVKMFDEMP-----ERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVK-DI 159
Query: 460 VVWGSLLGACRIHKNVDLGEI-AAKKLFELEP 490
W ++ +H + G++ A KLF+ P
Sbjct: 160 AAWNAM-----VHGYLQFGKVDDALKLFKQMP 186
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/661 (35%), Positives = 361/661 (54%), Gaps = 64/661 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHS 91
+ + NV SW S+I AR + +A+ F M R + P T C I +C+ L DL +
Sbjct: 194 MSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLET 253
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G++ + G + + SAL+DMY KC + A++LFDE N+ +M + Y
Sbjct: 254 GEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGAS--NLDLCNAMASNY 311
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
V+ +EAL + L+ +S + D +++ S +S+CS++ + H
Sbjct: 312 VRQGLTKEALGVLN--LMMDS----------GIRPDRISMLSAISSCSQLRNILWGKSCH 359
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG--- 268
G+V++ GF+S + N LID Y + D + ++FD M K VTWNSI+A Y +NG
Sbjct: 360 GYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVD 419
Query: 269 ----------------------------LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+ EA++VF M V + VT+ ++ A
Sbjct: 420 AAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASAC 479
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
HLG L L K I+ + K ++ V +GT+++DM+ +CG + A FN + ++V +WT
Sbjct: 480 GHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWT 539
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
A I M A++LF +MI+ G++P+ + F+ L+AC H GLVQ+G N+M
Sbjct: 540 AAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKL 599
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
+ P HYGCMVDLLGRAG L+EA LI+ M + + V+W SLL ACR+ NV++
Sbjct: 600 HGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAF 659
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
AA+K+ L P G +VLLSN+YA+AGRW D+ + R MK + L K PG S++++RGK H
Sbjct: 660 AAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTH 719
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA- 599
F GD+ HP+ KI L+EL+ + ++G+V D+++V+ DVD++EK L HSEKLA
Sbjct: 720 EFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAM 779
Query: 600 -----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
NLRVC CH+ + SKV +REI++RD+ RFH+ + G CSC D
Sbjct: 780 AFGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNREIILRDNNRFHFIRQGKCSCSD 839
Query: 643 Y 643
+
Sbjct: 840 F 840
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 234/493 (47%), Gaps = 55/493 (11%)
Query: 7 SSVSSVVSNVDKHSTNTNLTTLFNKYVDKN-----NVFSWNSVIADLARGGDSVEALRAF 61
S+++ +V+ + T +L+ F K V +N F +NS+I A G EA+ F
Sbjct: 64 SAITKLVARSCELGTRESLS--FAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLF 121
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
M ++P + TFP + C+ D +G Q H + +D+FV ++L+ Y++C
Sbjct: 122 IRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAEC 181
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
GEL ARK+FDE+ + RN+VSWTSM+ GY + + A++A+ LF + +E
Sbjct: 182 GELDCARKVFDEMSE--RNVVSWTSMICGYARREFAKDAVDLFFRMVRDE---------- 229
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
+V +SV + V+SAC+++ E + F+ G + + + L+D Y + +D+
Sbjct: 230 -DVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDI 288
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
++++FD + N++ + Y + GL EAL V + M+ S ++ + +++ + + + +
Sbjct: 289 AKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDS-GIRPDRISMLSAISSCS 347
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC----------------------- 338
L + GK H V++ E + ++IDMY KC
Sbjct: 348 QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS 407
Query: 339 --------GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF-YKMIKAGVRP 389
G+VD A + FN M EKN+ SW +I+ EA+++F Y + V
Sbjct: 408 IVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNV 467
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ +T +S+ SAC H G + W+ + I+ V +VD+ R G + A +
Sbjct: 468 DGVTMMSIASACGHLGALDLA-KWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSI 526
Query: 450 IEGMKVKADFVVW 462
+ + D W
Sbjct: 527 FNSLTNR-DVSAW 538
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 207/426 (48%), Gaps = 34/426 (7%)
Query: 72 TRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG---ELSDAR 128
T++T P ++K+C + +L K H G DV + L+ + G LS A+
Sbjct: 31 TKAT-PSSLKNCKTIDEL---KMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAK 86
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
++F E + + S++ GY + +EA+LLF + + + D
Sbjct: 87 EVF-ENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMM------------NSGISPDK 133
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
LS C++ G HG +IK + ++ V N+L+ YA G +D +RKVFD
Sbjct: 134 YTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDE 193
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M E++ V+W S+I YA+ A +A+D+F +MV+ DV N+VT+ V+ A A L L
Sbjct: 194 MSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLET 253
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
G+ ++D + +E + ++ ++++DMY KC +D+A++ F++ N+ AM + Y
Sbjct: 254 GEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVR 313
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
+EAL + M+ +G+RP+ I+ +S +S+CS + G H + + G E
Sbjct: 314 QGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWG-----KSCHGYVLRNGFE 368
Query: 429 HY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
+ ++D+ + + A+ + + M K V W S++ + VD AA +
Sbjct: 369 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVAGYIENGEVD----AAWE 423
Query: 485 LFELEP 490
F P
Sbjct: 424 TFNTMP 429
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 178/374 (47%), Gaps = 32/374 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++Y +N+ N++ ++ R G + EAL + M + P R + AI SCS L
Sbjct: 292 LFDEY-GASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLR 350
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ GK H GF + +ALIDMY KC A ++FD + + +V+W S+
Sbjct: 351 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK--TVVTWNSI 408
Query: 148 LTGYVQN---DNAREAL----------------LLFKEFLLEES-ECGGASENSDNVFVD 187
+ GY++N D A E L +E + EE+ E ++ + V VD
Sbjct: 409 VAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVD 468
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
V + S+ SAC + + + + ++ K +V +G TL+D ++R G + + +F+
Sbjct: 469 GVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFN 528
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ +D W + I A G A+++F++M++ +K + V L A H G+++
Sbjct: 529 SLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQ-GLKPDGVVFIGALTACCHGGLVQ 587
Query: 308 LGKCIHDQVIKMD--LEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIA 364
GK I + + K+ E V G ++D+ + G ++ A + M E N W +++A
Sbjct: 588 QGKEIFNSMEKLHGVSPEDVHYGC-MVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLA 646
Query: 365 GYGMHCRAREALDL 378
CR + +++
Sbjct: 647 A----CRVQGNVEM 656
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/572 (39%), Positives = 333/572 (58%), Gaps = 35/572 (6%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H GF + + L++ G++ AR++FDE+ + I W ++ GYV
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKP--RIFLWNTLFKGYV 85
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+N E+LLL+K+ V D V+ A S++ H
Sbjct: 86 RNQLPFESLLLYKKM------------RDLGVRPDEFTYPFVVKAISQLGDFSCGFALHA 133
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V+K GF V L+ Y + G + + +F+ M KD V WN+ +A+ Q G +A
Sbjct: 134 HVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAI 193
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL+ F++M V+ ++ T+ ++L A LG L +G+ I+D+ K +++ ++IV + +
Sbjct: 194 ALEYFNKMCADA-VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARL 252
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DM+ KCG + AR F +MK++NV SW+ MI GY M+ +REAL LF M G+RPNY+
Sbjct: 253 DMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYV 312
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTM--GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
TF+ VLSACSHAGLV EG + + M ++ N+EP EHY CMVDLLGR+G L+EAY+ I
Sbjct: 313 TFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFI 372
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
+ M V+ D +WG+LLGAC +H+++ LG+ A L E P+ YHVLLSNIYA AG+W+
Sbjct: 373 KKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWD 432
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
V++ RS M+ K +S VE GK+H F GDK HPQ + IYE L+E+ K++++G
Sbjct: 433 CVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMG 492
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
YV D SV HDV+ EEKE +L HSEKLA NLR C DCH +
Sbjct: 493 YVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSK 552
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+S + EI++RD RFH+F++G+CSC ++W
Sbjct: 553 FVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 165/339 (48%), Gaps = 19/339 (5%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K +F WN++ R E+L + MR L + P T+P +K+ S L D G
Sbjct: 71 KPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFA 130
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H +GF V++ L+ MY K GELS A LF+ + +++++V+W + L VQ
Sbjct: 131 LHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESM--QVKDLVAWNAFLAVCVQT 188
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
N+ AL F + +D V DS + S+LSAC ++ + E +
Sbjct: 189 GNSAIALEYFNKMC------------ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRA 236
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
K D + V N +D + + G+ + +R +F+ M +++ V+W+++I YA NG + EAL
Sbjct: 237 RKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREAL 296
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK---MDLEESVIVGTSI 331
+F M ++ ++ N VT VL A +H G++ GK +++ +LE +
Sbjct: 297 TLFTTM-QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACM 355
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+D+ + G ++ A + +M E + W A++ +H
Sbjct: 356 VDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
NT + + + + NV SW+++I A GDS EAL F++M+ L P TF +
Sbjct: 260 NTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLS 319
Query: 82 SCSALHDLHSGKQAHQ---QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
+CS ++ GK+ Q+ + ++D+ + G L +A + ++P
Sbjct: 320 ACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMP 376
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/593 (37%), Positives = 342/593 (57%), Gaps = 47/593 (7%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEI--P 135
++ C+++ LH + H I G+ + +S L++ S G L+ A+ +F I P
Sbjct: 30 LQGCNSMRKLH---KIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNP 86
Query: 136 QRIRNIVSWTSMLTGYVQNDNARE--ALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
Q +W SM+ G+ Q+ + + A++ + L ++ + D+ +
Sbjct: 87 Q----TPAWNSMIRGFSQSPSPLQLQAIVFYNHML-----------SASHARPDTYTFSF 131
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+L AC G HGF+I+ G+D +V + LI +YA G ++ + KVF+ M +D
Sbjct: 132 LLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARD 191
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V+WNS+I+ Y Q GL EAL ++DQM + ++V + TL ++L + AH+G L +G +H
Sbjct: 192 LVSWNSMISCYCQTGLHEEALKMYDQM-RISNVGFDGFTLVSLLSSCAHVGALHMGVQMH 250
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+ L E++ VG ++IDMY KCG + A FN M +++V +W +MI GYG+H R
Sbjct: 251 RFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGD 310
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
EA+ F M+ AGVRPN ITF+ +L CSH GLV+EG + + M EFN++PG++HYGCM
Sbjct: 311 EAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCM 370
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
VDL GRAGKLKEA ++I + D V+W +LLG+C+IH+NV++GE+A + L +L
Sbjct: 371 VDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGA 430
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
G VLLS IYA A + V R R L+++R + TPG+S +E+ +VH F+V DK HP
Sbjct: 431 GDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSR 490
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEK----EMTLRIHSEKLA---------- 599
+IY LEE+ + VGY + +S++ + + E + HSEKLA
Sbjct: 491 EIYRKLEEVIHRASLVGYAMEESSLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPE 550
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + +S DREI+VRD RFH+FK G CSC ++W
Sbjct: 551 GTSLLIVKNLRVCRDCHNFTKFVSMAFDREIIVRDRVRFHHFKGGHCSCKEFW 603
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 153/309 (49%), Gaps = 19/309 (6%)
Query: 40 SWNSVIADLARGGDSVE--ALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+WNS+I ++ ++ A+ ++ M S P TF +K+C + ++ H
Sbjct: 90 AWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVH 149
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
FG+ +DV + + LI Y+ G + A K+F+E+P R++VSW SM++ Y Q
Sbjct: 150 GFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPA--RDLVSWNSMISCYCQTGL 207
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EAL ++ + + NV D + S+LS+C+ V + H F +
Sbjct: 208 HEEALKMYDQMRI------------SNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGE 255
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
R + VGN LID YA+ G + + +F+ M ++D TWNS+I Y +G EA+
Sbjct: 256 RRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITF 315
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMY 335
F M+ + V+ N++T +L +H G+++ G + H + +L+ + ++D++
Sbjct: 316 FGSMLMA-GVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLF 374
Query: 336 CKCGQVDLA 344
+ G++ A
Sbjct: 375 GRAGKLKEA 383
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 135/294 (45%), Gaps = 26/294 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ ++ SWNS+I+ + G EAL+ + MR ++ T + SC+ + LH G
Sbjct: 187 MPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMG 246
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H+ A ++FV +ALIDMY+KCG L+ A +F+ +P+ R++ +W SM+ GY
Sbjct: 247 VQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPK--RDVFTWNSMIVGYG 304
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ EA+ F L+ V +S+ +L CS + V EG
Sbjct: 305 VHGRGDEAITFFGSMLMA------------GVRPNSITFLGLLCGCSHQGL--VKEGVQY 350
Query: 213 F-VIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVF-DGMIEKDAVTWNSIIA---IYA 265
F ++ F+ + G+ + ++D + R G + + +V + D V W +++ I+
Sbjct: 351 FHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHR 410
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL-GVLRLGKCIHDQVIK 318
+ A+ Q+ C V LS + L GV R+ K I + IK
Sbjct: 411 NVEIGEMAMRNLVQLGSLGAGDC--VLLSGIYAEAKDLQGVARMRKLIQSRGIK 462
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++FN + K +VF+WNS+I G EA+ F SM + P TF + CS
Sbjct: 283 SIFNS-MPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQ 341
Query: 87 HDLHSGKQA-HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ G Q H + F + ++D++ + G+L +A ++ P + + V W
Sbjct: 342 GLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQ-HDPVLWR 400
Query: 146 SML 148
++L
Sbjct: 401 TLL 403
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/546 (39%), Positives = 322/546 (58%), Gaps = 14/546 (2%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
TLF + + K NVFSWN + +R E + ++ M + P +FP +K+C+ L
Sbjct: 82 TLFFQ-IHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARL 140
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
LH G++ H G H DVFV +ALI +S CG + AR +FD +P +R++VSW S
Sbjct: 141 SLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNS 200
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M++GY+Q+ AL +F E L + S + D V + S LS C R+ + +
Sbjct: 201 MISGYLQSHRYELALKVFWELLGDGS-----------LSPDEVTLVSALSVCGRLGLLDL 249
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ HG GF +V VG++LID Y++ G ++ +RKVFD + ++ V W S+IA YAQ
Sbjct: 250 GKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQ 309
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
+ L EA+++F +M + +A T++ VL A H G L G+ IH + +E +
Sbjct: 310 SDLFKEAIELFREM-QIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLN 368
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM-IKA 385
++I MY KCG + A + F+ + + ++ SW+A+I+G M+ + +AL LF +M + +
Sbjct: 369 ARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMIS 428
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
+RPN ITF+ VL AC+H G V +G ++ N M +N+ PG+EHYGCMVDLLGRA L E
Sbjct: 429 DIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVE 488
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A I + ++ D V+W SLL ACR H N++L E AAK++ ELEP CG VLLSN+YA+
Sbjct: 489 AEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYAS 548
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
A RW DV+R R M +R+ K PG S VE+ G VH V D+ HP+ IYE + +N
Sbjct: 549 ASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISINKA 608
Query: 566 LQEVGY 571
LQ G+
Sbjct: 609 LQSKGF 614
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/567 (40%), Positives = 333/567 (58%), Gaps = 63/567 (11%)
Query: 112 SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
+ L+ Y + G +S+ARK+FD++P+R N+VSWT+M+ GYVQ EA LLF + + E
Sbjct: 29 NGLVSGYVQNGMISEARKVFDKMPER--NVVSWTAMIRGYVQEGLIEEAELLF--WRMPE 84
Query: 172 SECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD----SEVGVGN 227
+V+S V + G+ E ++ FD +V
Sbjct: 85 R--------------------NVVSWT--VMLGGLIEDGRVDEARQLFDMMPVKDVVAST 122
Query: 228 TLIDAYARGGHVDVSRKVFDGMI-------------EKDAVTWNSIIAIYAQNGLAAEAL 274
+ID G + +R++FD M EKD TW+++I IY + G EAL
Sbjct: 123 NMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEAL 182
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+F M + V+ + ++ +VL L L G+ +H Q+++ + + V + +I M
Sbjct: 183 ALFSLM-QREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITM 241
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y KCG + A++ F++ K++ W ++IAGY H +AL++F+ M + + P+ ITF
Sbjct: 242 YIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITF 301
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
+ VLSACS+ G V+EG +M ++ ++P EHY CMVDLLGRAGKL EA +LIE M
Sbjct: 302 IGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMP 361
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
V+AD +VWG+LLGACR HKN+DL EIAAKKL +LEPNN G ++LLSN+Y++ RW+DV
Sbjct: 362 VEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVE 421
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFL-VGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
R M+ + L K+PG S +E+ KVH F G HP+HE I + L +L L+E GY
Sbjct: 422 LRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCP 481
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
D + V+HDVD+EEK +LR HSEKLA NLRVCGD H+ I+LI+
Sbjct: 482 DGSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIA 541
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGD 642
+V REI++RD+ RFH+FKDGLCSC D
Sbjct: 542 QVTGREIILRDTNRFHHFKDGLCSCSD 568
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 182/383 (47%), Gaps = 23/383 (6%)
Query: 2 KLSKSSSVS--SVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
K+ +++++S +VS ++ + +F+K ++N V SW ++I + G EA
Sbjct: 19 KMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERN-VVSWTAMIRGYVQEGLIEEAEL 77
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
F M P R+ + + D + +Q F +DV S+ +ID
Sbjct: 78 LFWRM------PERNVVSWTVMLGGLIEDGRVDEA--RQLFDMMPVKDVVASTNMIDGLC 129
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF--KEFLLEESECGGA 177
G L +AR++FDE+PQ RN+V+WTSM++G + + ++ K F LE
Sbjct: 130 SEGRLIEAREIFDEMPQ--RNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSL 187
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
+ + V ++ SVLS C + H +++ FD ++ V + LI Y + G
Sbjct: 188 MQR-EGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCG 246
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
+ +++VFD KD V WNSIIA YAQ+G +AL+VF M S+ + + +T VL
Sbjct: 247 DLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMF-SSSIAPDEITFIGVL 305
Query: 298 LAIAHLGVLRLGKCIHDQV-IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKN 355
A ++ G ++ G I + + K ++ ++D+ + G+++ A M E +
Sbjct: 306 SACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEAD 365
Query: 356 VRSWTAMIAGYGMHCRAREALDL 378
W A++ CR + LDL
Sbjct: 366 AIVWGALLGA----CRTHKNLDL 384
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 39/267 (14%)
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV---LL 298
+RK+FD M E + ++WN +++ Y QNG+ +EA VFD+M + V A+ V L+
Sbjct: 13 ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLI 72
Query: 299 AIAHLGVLR------------LGKCIHD-------QVIKMDLEESVIVGTSIIDMYCKCG 339
A L R LG I D Q+ M + V+ T++ID C G
Sbjct: 73 EEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEG 132
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAG-------------YGMHCRAREALDLFYKMIKAG 386
++ AR+ F++M ++NV +WT+MI+G Y EAL LF M + G
Sbjct: 133 RLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREG 192
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTM-GHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
VRP++ + +SVLS C + G + + +F+I+ V ++ + + G L
Sbjct: 193 VRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVS--SVLITMYIKCGDLVT 250
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIH 472
A + + K D V+W S++ H
Sbjct: 251 AKRVFDRFSSK-DIVMWNSIIAGYAQH 276
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+++ K+ V WNS+IA A+ G +AL F M S+ P TF + +CS
Sbjct: 254 VFDRFSSKDIVM-WNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTG 312
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVS--SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ G + ++ + D + ++D+ + G+L++A L + +P IV W
Sbjct: 313 KVKEGLEIF-ESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIV-WG 370
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
++L + N A + K+ L E G
Sbjct: 371 ALLGACRTHKNLDLAEIAAKKLLQLEPNNAGP 402
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/593 (37%), Positives = 342/593 (57%), Gaps = 47/593 (7%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEI--P 135
++ C+++ LH + H I G+ + +S L++ S G L+ A+ +F I P
Sbjct: 12 LQGCNSMRKLH---KIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNP 68
Query: 136 QRIRNIVSWTSMLTGYVQNDNARE--ALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
Q +W SM+ G+ Q+ + + A++ + L ++ + D+ +
Sbjct: 69 Q----TPAWNSMIRGFSQSPSPLQLQAIVFYNHML-----------SASHARPDTYTFSF 113
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+L AC G HGF+I+ G+D +V + LI +YA G ++ + KVF+ M +D
Sbjct: 114 LLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARD 173
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V+WNS+I+ Y Q GL EAL ++DQM + ++V + TL ++L + AH+G L +G +H
Sbjct: 174 LVSWNSMISCYCQTGLHEEALKMYDQM-RISNVGFDGFTLVSLLSSCAHVGALHMGVQMH 232
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+ L E++ VG ++IDMY KCG + A FN M +++V +W +MI GYG+H R
Sbjct: 233 RFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGD 292
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
EA+ F M+ AGVRPN ITF+ +L CSH GLV+EG + + M EFN++PG++HYGCM
Sbjct: 293 EAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCM 352
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
VDL GRAGKLKEA ++I + D V+W +LLG+C+IH+NV++GE+A + L +L
Sbjct: 353 VDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGA 412
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
G VLLS IYA A + V R R L+++R + TPG+S +E+ +VH F+V DK HP
Sbjct: 413 GDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSR 472
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEK----EMTLRIHSEKLA---------- 599
+IY LEE+ + VGY + +S++ + + E + HSEKLA
Sbjct: 473 EIYRKLEEVIHRASLVGYAMEESSLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPE 532
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + +S DREI+VRD RFH+FK G CSC ++W
Sbjct: 533 GTSLLIVKNLRVCRDCHNFTKFVSMAFDREIIVRDRVRFHHFKGGHCSCKEFW 585
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 153/309 (49%), Gaps = 19/309 (6%)
Query: 40 SWNSVIADLARGGDSVE--ALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+WNS+I ++ ++ A+ ++ M S P TF +K+C + ++ H
Sbjct: 72 AWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVH 131
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
FG+ +DV + + LI Y+ G + A K+F+E+P R++VSW SM++ Y Q
Sbjct: 132 GFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPA--RDLVSWNSMISCYCQTGL 189
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EAL ++ + + NV D + S+LS+C+ V + H F +
Sbjct: 190 HEEALKMYDQMRI------------SNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGE 237
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
R + VGN LID YA+ G + + +F+ M ++D TWNS+I Y +G EA+
Sbjct: 238 RRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITF 297
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMY 335
F M+ + V+ N++T +L +H G+++ G + H + +L+ + ++D++
Sbjct: 298 FGSMLMA-GVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLF 356
Query: 336 CKCGQVDLA 344
+ G++ A
Sbjct: 357 GRAGKLKEA 365
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 26/290 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SWNS+I+ + G EAL+ + MR ++ T + SC+ + LH G Q H
Sbjct: 173 DLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMH 232
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+ A ++FV +ALIDMY+KCG L+ A +F+ +P+ R++ +W SM+ GY +
Sbjct: 233 RFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPK--RDVFTWNSMIVGYGVHGR 290
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF-VI 215
EA+ F L+ V +S+ +L CS + V EG F ++
Sbjct: 291 GDEAITFFGSMLMA------------GVRPNSITFLGLLCGCSHQGL--VKEGVQYFHMM 336
Query: 216 KRGFDSEVGVGN--TLIDAYARGGHVDVSRKVF-DGMIEKDAVTWNSIIA---IYAQNGL 269
F+ + G+ + ++D + R G + + +V + D V W +++ I+ +
Sbjct: 337 SSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEI 396
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL-GVLRLGKCIHDQVIK 318
A+ Q+ C V LS + L GV R+ K I + IK
Sbjct: 397 GEMAMRNLVQLGSLGAGDC--VLLSGIYAEAKDLQGVARMRKLIQSRGIK 444
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++FN + K +VF+WNS+I G EA+ F SM + P TF + CS
Sbjct: 265 SIFNS-MPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQ 323
Query: 87 HDLHSGKQA-HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ G Q H + F + ++D++ + G+L +A ++ P + + V W
Sbjct: 324 GLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQ-HDPVLWR 382
Query: 146 SML 148
++L
Sbjct: 383 TLL 385
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/641 (36%), Positives = 354/641 (55%), Gaps = 74/641 (11%)
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFH--RDVFVSSALIDMYSKCG 122
R +L+ + ++SC+ L G++ H G + F+ +AL+ Y+ CG
Sbjct: 5 RHTALSSVSRHYRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCG 64
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
ARK+FDEIP ++ V WT+++ +V+++ + EALL+F +E CG
Sbjct: 65 CAWQARKVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIF----VEMRRCG------- 113
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
V D V + + C+R+ V HG ++K G N ++D YA+ G + +
Sbjct: 114 -VKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEA 172
Query: 243 RKVF-------------------------------DGMIEKDAVTWNSIIAIYAQNGLAA 271
R+VF D M E++ V W +IA Y +GL
Sbjct: 173 RRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQ 232
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE-SVIVGTS 330
E+ + +M+ +++ N VTL ++L A + G L +G+ +H +K +E +++VGT+
Sbjct: 233 ESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTA 292
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++DMY KCG++ +A K F +M ++NV SW AM++G MH R ALD+F +M K +P+
Sbjct: 293 MVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEA-KPD 351
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+TF SVLSACSH+GLV +G + + + I P VEHY CMVDLLGRAG+L+EA L+
Sbjct: 352 DVTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILV 411
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
M ++ + VV GSLLG+C IH + LGE ++L +L+P N YH+LLSN+YA AG+
Sbjct: 412 REMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQN 471
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
R ++K R + K PG S + + G+VH F GDK HP+ ++Y L+E+ +L+ G
Sbjct: 472 RANSLRQVLKKRGIKKVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAG 531
Query: 571 YVTDMT--------SVIHD-VDQEEKEMTLRIHSEKLA------------------NLRV 603
Y + S+ D V+QEEKE L HSEKLA NLR+
Sbjct: 532 YAPNTALQTFAGCDSLEDDLVEQEEKEQALFSHSEKLAICFGLISTGPGVPLHIFKNLRI 591
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
C DCH+ I+++SK+ +REIV+RD RFH FK+G CSC DYW
Sbjct: 592 CQDCHSAIKIVSKIYNREIVIRDRNRFHCFKEGSCSCCDYW 632
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 205/440 (46%), Gaps = 64/440 (14%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
W +++ R S EAL F MR+ + P T C C+ L D+ G Q H
Sbjct: 86 WTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMV 145
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
G +A++DMY+K G + +AR++F E+ + +++VSWT +L G ++++ R
Sbjct: 146 KMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEM--KGQSVVSWTVILDGVIRSEGVRNG 203
Query: 161 LLLFKEFLLEESECG-----------GASENS-----DNVF-----VDSVAIASVLSACS 199
++F E + E +E G ++ S + +F ++ V + S+L+ACS
Sbjct: 204 RVVFDE-MPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACS 262
Query: 200 RVTVNGVTEGAHGFVIK-RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ + H + +K + + + VG ++D YA+ G + ++ K F M +++ V+WN
Sbjct: 263 QSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWN 322
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
++++ A +GL ALD+F QM K + K + VT ++VL A +H G++ G C + +
Sbjct: 323 AMLSGLAMHGLGRAALDIFPQMFK--EAKPDDVTFTSVLSACSHSGLVDQG-CFYFGNL- 378
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
ESV T ++ Y M+ G R EA L
Sbjct: 379 ----ESVYGITPKVEHY------------------------ACMVDLLGRAGRLEEAEIL 410
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP-GVEHYGCMVDLL 437
+M +RPN + S+L +CS G +Q G H L + ++P E++ + ++
Sbjct: 411 VREM---PIRPNEVVLGSLLGSCSIHGKLQLGEHLLQEL---VQLDPQNTEYHILLSNMY 464
Query: 438 GRAGKLKEAYDLIEGMKVKA 457
AGK A L + +K +
Sbjct: 465 ALAGKQNRANSLRQVLKKRG 484
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/615 (38%), Positives = 344/615 (55%), Gaps = 67/615 (10%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS--KCGELSDARKLFDEIPQR 137
++ CS + +L +Q H Q G D +S L+ + G L+ AR +FD I +
Sbjct: 25 LQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRP 81
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
N W +M+ GY + EALLL+ L +V ++ +L A
Sbjct: 82 --NTFMWNTMIRGYSNSKEPEEALLLYHHMLYH------------SVPHNAYTFPFLLKA 127
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
CS ++ T+ H +IK GF SE+ N+L++ Y++ G + +R +FD + ++D V+W
Sbjct: 128 CSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSW 187
Query: 258 NSIIAIYAQNGLAAEALDVFDQM------------------------------VKSTDVK 287
NS+I Y + G A ++F+ M +++ +K
Sbjct: 188 NSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIK 247
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
+ V L + L A A LGVL GK IH + K ++E I+G +IDMY KCG ++ A +
Sbjct: 248 LDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEV 307
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F +M+EK V WTAMI+GY +H R REAL+ F KM AGV PN +TF +L+ACSHAGLV
Sbjct: 308 FRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLV 367
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
E +M +P +EHYGCMVDLLGRAG LKEA +LIE M VK + +WG+LL
Sbjct: 368 HEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLN 427
Query: 468 ACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKT 527
AC IH N++LG+ K L +++P + G ++ L++I+A AG W R R MK + ++K
Sbjct: 428 ACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKL 487
Query: 528 PGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEK 587
PG S++ + G H FL GD+ HPQ ++I LE++ +L+E GY + ++ D++ +EK
Sbjct: 488 PGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEK 547
Query: 588 EMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
E + HSEKLA NLRVC DCHTVI+LISKV REI++RD R
Sbjct: 548 ETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTR 607
Query: 630 FHYFKDGLCSCGDYW 644
FH FKDG C+CGDYW
Sbjct: 608 FHLFKDGNCTCGDYW 622
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 182/374 (48%), Gaps = 45/374 (12%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
T+F++ + + N F WN++I + + EAL + M S+ TFP +K+CS++
Sbjct: 73 TVFDR-IFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSM 131
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR--------- 137
L +Q H GF +++ +++L+++YSK G++ AR LFD++ QR
Sbjct: 132 SALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMI 191
Query: 138 --------------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
RNI+SWTSM++G V +EAL LF
Sbjct: 192 DGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRM---------- 241
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
+ + +D+VA+ S L AC+ + V + H ++ K + + +G LID YA+ G
Sbjct: 242 --QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCG 299
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
++ + +VF M EK W ++I+ YA +G EAL+ F +M ++ V+ N +T + +L
Sbjct: 300 DLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKM-QTAGVEPNQMTFTGIL 358
Query: 298 LAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-N 355
A +H G++ K + + + ++ + S+ ++D+ + G + A + M K N
Sbjct: 359 TACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPN 418
Query: 356 VRSWTAMIAGYGMH 369
W A++ +H
Sbjct: 419 AAIWGALLNACHIH 432
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/587 (40%), Positives = 332/587 (56%), Gaps = 41/587 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID--MYSKCGELSDARKLFDEIPQR 137
+K C ++ + KQ H G D F S L+ S+ G + A +F +I +
Sbjct: 38 LKRCKSMEEF---KQVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFSQIEEP 94
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ +M+ G V + + EALLL+ E L E G +N FV L A
Sbjct: 95 --GSFEYNTMIRGNVNSMDLEEALLLYVEML----ERGIEPDNFTYPFV--------LKA 140
Query: 198 CSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
CS + + EG H V K G + +V V N LI Y + G ++ + VF+ M EK
Sbjct: 141 CSLLV--ALKEGVQIHAHVFKAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVA 198
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+W+SII +A + E L + M + L + L A HLG LG+CIH
Sbjct: 199 SWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNLGRCIHGI 258
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+++ E +V+V TS+IDMY KCG ++ F M KN S+T MIAG +H R REA
Sbjct: 259 LLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREA 318
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
+ +F M++ G+ P+ + +V VLSACSHAGLV EG N M E I+P ++HYGCMVD
Sbjct: 319 VRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVD 378
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY 495
L+GRAG LKEAYDLI+ M +K + VVW SLL AC++H N+++GEIAA+ +F L +N G
Sbjct: 379 LMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFRLNKHNPGD 438
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
+++L+N+YA A +W +V R R+ M + L +TPGFSLVE V+ F+ DK P E I
Sbjct: 439 YLVLANMYARAKKWANVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPICETI 498
Query: 556 YEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------- 599
Y+ ++++ +L+ GY DM+ V+ DVD++EK L+ HS+KLA
Sbjct: 499 YDMIQQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPIRI 558
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCHT + IS + +REI VRD RFH+FKDG CSC DYW
Sbjct: 559 SRNLRMCNDCHTYTKFISVIYEREITVRDRNRFHHFKDGTCSCKDYW 605
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 164/370 (44%), Gaps = 49/370 (13%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+++ F +N++I D EAL + M + + P T+P +K+CS L L G
Sbjct: 91 IEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEG 150
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H F G DVFV + LI MY KCG + A +F+++ + +++ SW+S++ +
Sbjct: 151 VQIHAHVFKAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDE--KSVASWSSIIGAHA 208
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ E L+L + E G +++ V S LSAC+ + + HG
Sbjct: 209 SVEMWHECLMLLGDMSGE-----GRHRAEESILV------SALSACTHLGSPNLGRCIHG 257
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+++ + V V +LID Y + G ++ VF M K+ ++ +IA A +G E
Sbjct: 258 ILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGRE 317
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSI 331
A+ VF M++ + + V VL A +H G++ G +C +
Sbjct: 318 AVRVFSDMLEE-GLTPDDVVYVGVLSACSHAGLVNEGLQCFN------------------ 358
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
R F M + ++ + M+ G +EA DL M ++PN
Sbjct: 359 -------------RMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSM---PIKPND 402
Query: 392 ITFVSVLSAC 401
+ + S+LSAC
Sbjct: 403 VVWRSLLSAC 412
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 253/664 (38%), Positives = 374/664 (56%), Gaps = 46/664 (6%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S ++++S K S LF++ ++V S+N++IA AR GD+ A + F MR+
Sbjct: 76 SFNTLISAYAKESYVEVAHQLFDEMPQPDSV-SYNTLIAAYARRGDTQPAFQLFLEMREA 134
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
L T I +C ++ +Q H + + G V V +ALI YSK G L +A
Sbjct: 135 FLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEA 192
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R++F + + R+ VSW SM+ Y+Q+ +AL L+ E + + VD
Sbjct: 193 RRIFHWLSED-RDEVSWNSMVVAYMQHREGSKALELYLEMTVR------------GLIVD 239
Query: 188 SVAIASVLSACSRVT--VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR-GGHVDVSRK 244
+ASVL+A + V + G+ H +IK G+ VG+ LID Y++ GG + RK
Sbjct: 240 IFTLASVLTAFTNVQDLLGGLQ--FHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRK 297
Query: 245 VFDGMIEKDAVTWNSIIAIYA-QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VFD + D V WN++I+ Y+ L+ EAL+ F Q+ + + + +L V+ A +++
Sbjct: 298 VFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQL-QVVGHRPDDCSLVCVISACSNM 356
Query: 304 GVLRLGKCIHDQVIKMDLEESVI-VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
G+ +H +K+D+ + I V ++I MY KCG + A+ F+ M E N S+ +M
Sbjct: 357 SSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSM 416
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
IAGY H ++L LF +M++ G P ITF+SVL+AC+H G V++G + N M +F
Sbjct: 417 IAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFG 476
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
IEP H+ CM+DLLGRAGKL EA LIE + F W +LLGACRIH NV+L AA
Sbjct: 477 IEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAA 536
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
+L +L+P N +V+L+NIY++ GR +D R LM++R + K PG S +E+ ++H F
Sbjct: 537 NRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIF 596
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVD----QEEKEMTLRIHSEKL 598
+ D HP +KI EYLEE+ K+++VGY ++ S + D Q E+E+ L HSEKL
Sbjct: 597 VAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKL 656
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLR+C DCH I+ IS+VV REI VRDS RFH FKDG CSC
Sbjct: 657 AVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSC 716
Query: 641 GDYW 644
G YW
Sbjct: 717 GGYW 720
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 230/469 (49%), Gaps = 35/469 (7%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+K+C A DL +GK H ++S+ + +YSKC LS AR++FD
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHD--C 72
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEF----------LLEESECGGASENSDNVFV--- 186
N+ S+ ++++ Y + A LF E L+ G ++ + +F+
Sbjct: 73 NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132
Query: 187 ------DSVAIASVLSACSRVTVN-GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
D ++ +++AC +N G+ H + G DS V VGN LI +Y++ G +
Sbjct: 133 EAFLDMDGFTLSGIITACG---INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFL 189
Query: 240 DVSRKVFDGMIE-KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
+R++F + E +D V+WNS++ Y Q+ ++AL+++ +M + + TL++VL
Sbjct: 190 KEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLI-VDIFTLASVLT 248
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL-ARKAFNQMKEKNVR 357
A ++ L G H ++IK ++ VG+ +ID+Y KCG L RK F+++ ++
Sbjct: 249 AFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLV 308
Query: 358 SWTAMIAGYGMHCR-AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
W MI+GY ++ + EAL+ F ++ G RP+ + V V+SACS+ +G ++
Sbjct: 309 LWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQG-RQVHG 367
Query: 417 MGHEFNIEPG-VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
+ + +I + ++ + + G L++A L + M + + V + S++ H
Sbjct: 368 LALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTVSYNSMIAGYAQHGMG 426
Query: 476 DLGEIAAKKLFEL--EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNR 522
+++ E+ P N + +L+ A+ GR ED + ++MK +
Sbjct: 427 FQSLHLFQRMLEMGFTPTNITFISVLAAC-AHTGRVEDGKIYFNMMKQK 474
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/616 (37%), Positives = 338/616 (54%), Gaps = 68/616 (11%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQR 137
+ SC L DL Q H Q G D FV+S ++ S G + AR LF I R
Sbjct: 42 LSSCKTLKDL---TQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRI--R 96
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+I +++ Y + N +A++ + E S VF D +L A
Sbjct: 97 KPDIFIANTLIRAYAFSPNPIDAVVFYSEM-----------TESSVVFPDVHTFPLLLKA 145
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS--------------- 242
CS + + E H V K G+ SEV V N L+ YA G ++ +
Sbjct: 146 CSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASW 205
Query: 243 ----------------RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
R++F+ M ++D V+W+ +I Y Q E L +F M+ +
Sbjct: 206 NIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMM-GEKI 264
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+ N L L A AHLG + G+ I + + ++ +V +GT++IDMY KCG V+ A +
Sbjct: 265 EPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALE 324
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F++MKEKNV +W+AMI G ++ + ++AL+LF +M GV+PN +TF+ +L+ACSH+ L
Sbjct: 325 VFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKL 384
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V EG + ++M + ++P H+ CMVDL GRAG L +A +I+ M K + +WG+LL
Sbjct: 385 VDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALL 444
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
ACRIH + +LGE K+L EL+PN+ G +VLLSNIYA GRW+ V R +M+ R+++K
Sbjct: 445 NACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSK 504
Query: 527 TPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
TPG S ++L +H F+ GD HPQ E IY L E++ +L+ GY D V+ D+D+EE
Sbjct: 505 TPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEE 564
Query: 587 KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSK 628
KE L HSEKLA NLRVC DCH+ +LISK+ +REI+VRD
Sbjct: 565 KETALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRC 624
Query: 629 RFHYFKDGLCSCGDYW 644
RFH+F+DG CSC D+W
Sbjct: 625 RFHHFRDGSCSCMDFW 640
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 192/415 (46%), Gaps = 55/415 (13%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSALHDLHS 91
+ K ++F N++I A + ++A+ +S M + S+ P TFP +K+CS + L
Sbjct: 95 IRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRL 154
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYS-------------------------------K 120
G+ H F G+ +V VS+ L+ MY+ K
Sbjct: 155 GEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLK 214
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG AR++F+ +P R++VSW+ M+ GYVQ +E L LF++ + G E
Sbjct: 215 CGVFKSARRMFEAMPD--RDVVSWSVMINGYVQESRFKEGLGLFQDMM------GEKIEP 266
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+++V V++ LSAC+ + + ++ ++ V +G LID Y++ G V+
Sbjct: 267 NESVLVNA------LSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVE 320
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+ +VF M EK+ + W+++I A NG +AL++F QM + VK N VT +L A
Sbjct: 321 RALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQM-EMQGVKPNEVTFIGILNAC 379
Query: 301 AHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRS 358
+H ++ G H L+ + ++D+Y + G +D A+ M K N
Sbjct: 380 SHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAI 439
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPN----YITFVSVLSACSHAGLVQE 409
W A++ +H + ++++ + PN Y+ ++ +AC V E
Sbjct: 440 WGALLNACRIHGDTELGEQVGKRLLE--LDPNHGGRYVLLSNIYAACGRWDRVAE 492
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/633 (38%), Positives = 353/633 (55%), Gaps = 72/633 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V ++ +WNS+IA R G S EA+ + M + P TF K+ S L +H G
Sbjct: 137 VPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEG 196
Query: 93 KQAHQQAFIFGFH-RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
++AH Q+ + G +VFV SAL+DMY+K G++ DAR + D++ + ++V +T+++ GY
Sbjct: 197 QRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGK--DVVLFTALIVGY 254
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG-- 209
+ E+L +F+ + + ++SVL C + +T G
Sbjct: 255 SHHGEDGESLQVFRNM------------TKKGIEANEYTLSSVLVCCG--NLEDLTSGRL 300
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG ++K G +S AVTW S+I QNG
Sbjct: 301 IHGLIVKAGLES--------------------------------AVTWTSVIVGLVQNGR 328
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
AL F QM++S+ + N+ TLS+VL A + L +L GK IH V+K L+ VG
Sbjct: 329 EEIALLKFRQMLRSS-ITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGA 387
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
++ID Y KCG ++AR FN + E +V S +MI Y + EAL LF M G+ P
Sbjct: 388 ALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEP 447
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
N +T++ VLSAC++AGL++EG H ++ + NIE +HY CMVDLLGRAG+LKEA L
Sbjct: 448 NNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEML 507
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I + + +D V+W +LL ACRIH +V++ + ++ +L P + G HVLLSN+YA+ G W
Sbjct: 508 INQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNW 566
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
V +S M+ RL K P S V++ ++H F+ GD HP I E LEEL K++E+
Sbjct: 567 SKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKEL 626
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------------NLRVCGDCHTV 610
GYV D V+ D+D+E+K +L HSEKLA NLRVCGDCHT
Sbjct: 627 GYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTW 686
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
++ +SK+V R+I+ RD KRFH+F++GLCSCGDY
Sbjct: 687 MKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 210/449 (46%), Gaps = 59/449 (13%)
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
S + + + I+ C + + + A GFH + + LID Y KCG + A
Sbjct: 73 SFSESLQLYSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYA 130
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
RK+FDE+P R+IV+W SM+ Y++N ++EA+ +++ + D + D
Sbjct: 131 RKVFDEVPH--RHIVAWNSMIASYIRNGRSKEAIDIYQRMV------------PDGILPD 176
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD-SEVGVGNTLIDAYARGGHVDVSRKVF 246
+SV A S + + + AHG + G S V VG+ L+D YA+ G + +R V
Sbjct: 177 EFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVS 236
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D ++ KD V + ++I Y+ +G E+L VF M K ++ N TLS+VL+ +L L
Sbjct: 237 DQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKK-GIEANEYTLSSVLVCCGNLEDL 295
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
G+ IH ++K LE +V +WT++I G
Sbjct: 296 TSGRLIHGLIVKAGLESAV--------------------------------TWTSVIVGL 323
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ R AL F +M+++ + PN T SVL ACS ++++G ++ + +F ++
Sbjct: 324 VQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQ-IHAIVMKFGLDID 382
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI----HKNVDLGEIAA 482
++D G+ G + A + G+ ++ D V S++ + H+ + L +
Sbjct: 383 KYVGAALIDFYGKCGSTEIARSVFNGL-LEVDVVSVNSMIYSYAQNGFGHEALQL--FSG 439
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWED 511
K LEPNN + +LS NAG E+
Sbjct: 440 MKDTGLEPNNVTWLGVLSAC-NNAGLLEE 467
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 234/682 (34%), Positives = 371/682 (54%), Gaps = 57/682 (8%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTN-LTTLFNKYV---------------DKNNVFSWNSV 44
+K ++ ++N + + N L +L N YV + NV SW+++
Sbjct: 35 LKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSAL 94
Query: 45 IADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFG 103
+A + G+ +E F M K ++ P AI SC + + GKQ H A G
Sbjct: 95 MAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYV-EGKQCHGYALKSG 153
Query: 104 FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
+V +ALI +YSKC ++ A ++ +P +I + ++ G +Q+ + EA+ +
Sbjct: 154 LEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGN--DIFCYNLVVNGLLQHTHMAEAVDV 211
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEV 223
K + E E A+ ++ C+ + + + H ++K D +V
Sbjct: 212 LKLIISEGIEWNNAT------------YVTIFRLCASLKDITLGKQVHAQMLKSDIDCDV 259
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
+G+++ID Y + G+V R FD + ++ V+W SIIA Y QN EAL++F +M
Sbjct: 260 YIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKM--- 316
Query: 284 TDVKC---NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
++ C N T++ + + A L L LG +H + K L+ +V+VG ++I MY K G
Sbjct: 317 -EIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGD 375
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+ A+ F+ M N+ +W A+I G+ H +EAL +F M+ G RPNY+TF+ V+ A
Sbjct: 376 ILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILA 435
Query: 401 CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
C+H LV EG+++ N + +F I PG+EHY C+V LL R+G+L EA + + ++ D V
Sbjct: 436 CAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVV 495
Query: 461 VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMK 520
W +LL AC +HK+ D G A+ L +LEP + G ++LLSN++A RW+ V R LM+
Sbjct: 496 SWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMR 555
Query: 521 NRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIH 580
R + K PG S +E+R H F D +HP+ IYE +++L K++ +GYV D+ +V+H
Sbjct: 556 ERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLH 615
Query: 581 DVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREI 622
D++ E+K L HSEKLA NLR+C DCHT I+LISKV +R I
Sbjct: 616 DIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVI 675
Query: 623 VVRDSKRFHYFKDGLCSCGDYW 644
VVRD+ RFH+F++G CSCGDYW
Sbjct: 676 VVRDANRFHHFQNGCCSCGDYW 697
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/632 (36%), Positives = 351/632 (55%), Gaps = 42/632 (6%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ N+ SWN++I+ A G + FS+M +L P ST+ ++S L GKQ
Sbjct: 73 ERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQ 132
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H A G + V++A+ +MY KCG L A +F+++ ++ N V+WT ++ GY Q
Sbjct: 133 IHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEK--NAVAWTGIMVGYTQA 190
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
+ +AL LF + + ++ V +D + VL AC+ + HG +
Sbjct: 191 ERQMDALALFAKMV------------NEGVELDEYVFSIVLKACAGLEELNFGRQIHGHI 238
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+K G +SEV VG L+D Y + +++ + K F+ + E + V+W+++I Y Q G EAL
Sbjct: 239 VKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEAL 298
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
F+ + ++ V N+ T +++ A + L G H IK L +++I M
Sbjct: 299 KTFESL-RTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITM 357
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y +CG++D A + F + + + +WTA+IAGY A EAL LF +M GVRPN +TF
Sbjct: 358 YSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTF 417
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
++VL+ACSH+GLV EG +L +M + + ++HY CMVD+ RAG L+EA +LI M
Sbjct: 418 IAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMP 477
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
D + W LLG C ++N+++GE+AA+ LF+L+P + ++L+ N+YA+ G+W++
Sbjct: 478 FSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAAN 537
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN--VKLQEVGYV 572
R +M R L K S + ++GKVH F+VGDK HPQ E+IY LE LN V +E G +
Sbjct: 538 VRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSVIKEETGLL 597
Query: 573 TDMTSVIHDVDQ--EEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
T+ DV E++ L +HSE+LA NLR C DCH +
Sbjct: 598 TE-----EDVSNSLPERKEQLLVHSERLALAFGLISTPSSAPVVVFKNLRACKDCHDFGK 652
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+S + REIVVRDS RFH+FK G CSC DYW
Sbjct: 653 QVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 202/432 (46%), Gaps = 32/432 (7%)
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
+S++P ++ C ++C + L G+ H+Q + F+ ++++ MY KCG L+D
Sbjct: 6 ISVSP--RSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLAD 63
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
ARK+FDE+ R RN+VSW ++++ Y +N + +F L E++ G++ F+
Sbjct: 64 ARKVFDEM--RERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIG---FL 118
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
S+ S L ++ H I+ G S V + + Y + G ++ + VF
Sbjct: 119 RSLLNPSGLEIGKQI---------HSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVF 169
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ M EK+AV W I+ Y Q +AL +F +MV + V+ + S VL A A L L
Sbjct: 170 EKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMV-NEGVELDEYVFSIVLKACAGLEEL 228
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
G+ IH ++K+ LE V VGT ++D Y KC ++ A KAF + E N SW+A+I GY
Sbjct: 229 NFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGY 288
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
EAL F + V N T+ S+ ACS G H I+
Sbjct: 289 CQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSG-----AQAHADAIKSS 343
Query: 427 VEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
+ Y M+ + R G+L A + E + D V W +++ N A
Sbjct: 344 LVAYQHGESAMITMYSRCGRLDYATRVFESID-DPDAVAWTAIIAGYAYQGNAP----EA 398
Query: 483 KKLFELEPNNCG 494
KLF +CG
Sbjct: 399 LKLFR-RMQDCG 409
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 177/371 (47%), Gaps = 29/371 (7%)
Query: 3 LSKSSSVSSVVSNVD-KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
L ++SV++ +SN+ K +F K +KN V +W ++ + ++AL F
Sbjct: 142 LGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAV-AWTGIMVGYTQAERQMDALALF 200
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
+ M + F +K+C+ L +L+ G+Q H G +V V + L+D Y KC
Sbjct: 201 AKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKC 260
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
L A K F+ I + N VSW++++TGY Q EAL F+ S +
Sbjct: 261 SNLESATKAFEWISE--PNDVSWSALITGYCQMGEFEEALKTFE------------SLRT 306
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
+V ++S S+ ACS + AH IK + + +I Y+R G +D
Sbjct: 307 RSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDY 366
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ +VF+ + + DAV W +IIA YA G A EAL +F +M + V+ NAVT AVL A +
Sbjct: 367 ATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRM-QDCGVRPNAVTFIAVLTACS 425
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSI------IDMYCKCGQVDLARKAFNQMK-EK 354
H G++ G+ Q ++ + + V T+I +D+Y + G + A + M
Sbjct: 426 HSGLVIEGR----QYLE-SMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSP 480
Query: 355 NVRSWTAMIAG 365
+ SW ++ G
Sbjct: 481 DAMSWKCLLGG 491
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/612 (36%), Positives = 344/612 (56%), Gaps = 42/612 (6%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P S + +K C L GKQ H G +++S+ L+DMY+KCG L DA K+
Sbjct: 117 PYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKV 175
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE--------SECGGASENSD 182
FDE+ R ++ SW M++GYV+ N +A LF + + S C + +
Sbjct: 176 FDEMVHR--DLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEE 233
Query: 183 NVFVDSVAIASVLSACSRVTVNG------------VTEGAHGFVIKRGFDSEVGVGNTLI 230
+ + + S ++ T++ + + HG +++ G DS+ V +L+
Sbjct: 234 ALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLL 293
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
D Y + G ++ +R +FD M E+D V+W ++I Y +NG E +F ++ S ++ N
Sbjct: 294 DMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNS-NIMPND 352
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
T + VL A A L LGK IH ++++ + ++++ MY KCG ++ A+ F
Sbjct: 353 FTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEI 412
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
+ + ++ SWT+++ GY H + +AL F ++K+G +P+ I F+ VLSAC+HAGLV +G
Sbjct: 413 LPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKG 472
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
+ +++ + + ++HY C++DLL RAG+ EA +I M +K D +W +LLG CR
Sbjct: 473 LEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCR 532
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
IH N++L + AAK LFE+EP N +V L+NIYA+AG + R M +R + K PG
Sbjct: 533 IHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGM 592
Query: 531 SLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMT 590
S +E+R +VH F VGD HP+ ++I EYL EL+ +++EVGYV D V+HDV+ E+KE
Sbjct: 593 SWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEEN 652
Query: 591 LRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHY 632
L HSEKLA NLR C DCH I+ IS + R+I+VRDS RFH
Sbjct: 653 LSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHC 712
Query: 633 FKDGLCSCGDYW 644
F+ G CSC DYW
Sbjct: 713 FEGGSCSCKDYW 724
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 200/397 (50%), Gaps = 26/397 (6%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPT-RSTFPCAIKSCSA 85
LF+K +++N FSW ++I+ + EAL + M+K + + + T A+ + +A
Sbjct: 205 NLFDKMPNRDN-FSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAA 263
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ LH GK+ H G D V +L+DMY KCG + +AR +FD++ + R++VSWT
Sbjct: 264 IPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEE--RDVVSWT 321
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M+ Y++N E LF+ + + N+ + A VL+AC+ +
Sbjct: 322 TMIHTYLKNGRREEGFALFRHLM------------NSNIMPNDFTFAGVLNACADLAAED 369
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ + H ++++ GFDS + L+ Y++ G ++ ++ VF+ + + D +W S++ YA
Sbjct: 370 LGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYA 429
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEES 324
Q+G +AL F+ ++KS K + + VL A AH G++ G + H K L +
Sbjct: 430 QHGQHDKALHFFELLLKS-GTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRT 488
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMHCRAREALDLFYKMI 383
+ IID+ + GQ A N+M K + W A++ G CR L+L +
Sbjct: 489 IDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGG----CRIHGNLELAKRAA 544
Query: 384 KA--GVRP-NYITFVSVLSACSHAGLVQEGWHWLNTM 417
K+ + P N T+V++ + + AG+ E + TM
Sbjct: 545 KSLFEIEPENPATYVTLANIYASAGMRAEEANIRETM 581
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/662 (35%), Positives = 366/662 (55%), Gaps = 73/662 (11%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
S S V+ +S+ ++ ++F ++ KN+ + +N++I LA ++ F
Sbjct: 71 FSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNS-YLFNALIRGLAENSRFESSISFFV 129
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
M K ++P R TFP +KS +AL + G+ H FG D FV +L+DMY K
Sbjct: 130 LMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVE 189
Query: 123 ELSDARKLFDEIPQRIRN--IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
EL A K+FDE P+ ++N ++ W ++ GY + + +A LF
Sbjct: 190 ELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELF---------------- 233
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
DS+ + G N+LI+ + + G +
Sbjct: 234 ------DSMP-----------------------------KKDTGSWNSLINGFMKMGDMG 258
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
++++F M EK+ V+W +++ ++QNG +AL+ F M++ + N T+ + L A
Sbjct: 259 RAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEE-GARPNDYTIVSALSAC 317
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
A +G L G IH+ + + ++++GT+++DMY KCG ++ A K F++ KEK + W+
Sbjct: 318 AKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWS 377
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
MI G+ +H R+AL F M G +P+ + F++VL+ACSH+G V EG + + M
Sbjct: 378 VMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRG 437
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
+ IEP ++HY +VD+LGRAG+L EA I M + DFVVWG+L ACR HKNV++ E+
Sbjct: 438 YLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAEL 497
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
A+KKL +LEP + G +V LSN YA+ GRW+D ER R M++ K PG+S +E+ K+H
Sbjct: 498 ASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLH 557
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA- 599
F+ GD H + +IY L+E++ +E GY ++ V+H++++EEKE L HSEKLA
Sbjct: 558 RFVAGDNTHNRAVEIYSKLDEISASAREKGYTKEIECVLHNIEEEEKEEALGYHSEKLAL 617
Query: 600 -----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
NLRVC DCH+ ++ SK+ REI++RD KRFH+F DG+CSCGD
Sbjct: 618 AFGIVSTRPGTTVRIVKNLRVCVDCHSFMKYASKMSKREIILRDMKRFHHFNDGVCSCGD 677
Query: 643 YW 644
YW
Sbjct: 678 YW 679
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 124/265 (46%), Gaps = 21/265 (7%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M + S +S+++ K LF K +KN V SW +++ ++ GD +AL
Sbjct: 236 MPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKN-VVSWTTMVNGFSQNGDPEKALET 294
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F M + P T A+ +C+ + L +G + H GF ++ + +AL+DMY+K
Sbjct: 295 FFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAK 354
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG + A K+F E + + ++ W+ M+ G+ + + R+AL F+ ++
Sbjct: 355 CGNIEHAEKVFHETKE--KGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTK------- 405
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF-VIKRGFDSEVGVGN--TLIDAYARGG 237
DSV +VL+ACS V EG F ++RG+ E + + ++D R G
Sbjct: 406 -----PDSVVFLAVLNACSH--SGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAG 458
Query: 238 HVDVSRKVFDGM-IEKDAVTWNSII 261
+D + K M I D V W ++
Sbjct: 459 RLDEALKFIRAMPITPDFVVWGALF 483
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 132/331 (39%), Gaps = 75/331 (22%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG + + S V I + + VD + +F K++ +N++I A+N
Sbjct: 62 HGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRF 121
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
++ F M+K + + +T VL + A L +G+ +H ++K LE V S
Sbjct: 122 ESSISFFVLMLK-WKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVS 180
Query: 331 IIDM-----------------------------------YCKCGQVDLARKAFNQMKEKN 355
++DM YC+ G + A + F+ M +K+
Sbjct: 181 LVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKD 240
Query: 356 VRSWTAMIAGY---GMHCRARE----------------------------ALDLFYKMIK 384
SW ++I G+ G RA+E AL+ F+ M++
Sbjct: 241 TGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLE 300
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGW---HWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
G RPN T VS LSAC+ G + G ++L+ G + N+ G +VD+ + G
Sbjct: 301 EGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGT----ALVDMYAKCG 356
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++ A + K K ++W ++ IH
Sbjct: 357 NIEHAEKVFHETKEKG-LLIWSVMIWGWAIH 386
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 107/259 (41%), Gaps = 27/259 (10%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
IH Q+ + ++ S V T I VD A F + + KN + A+I G + R
Sbjct: 61 IHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSR 120
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVL---SACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
++ F M+K + P+ +TF VL +A S+ G+ + + G EF+ V
Sbjct: 121 FESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVS 180
Query: 429 HYGCMVDLLGRAGKLKEAYDLI----EGMKVKADFVVWGSLL-GACRIHKNVDLGEIAAK 483
+VD+ + +L A + E +K ++W L+ G CR+ DL + A
Sbjct: 181 ----LVDMYVKVEELGSALKVFDESPESVK-NGSVLIWNVLIHGYCRMG---DL--VKAT 230
Query: 484 KLFELEP-NNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
+LF+ P + G L N + G D+ R + L K P ++V V+ F
Sbjct: 231 ELFDSMPKKDTGSWNSLINGFMKMG---DMGRAKEL-----FVKMPEKNVVSWTTMVNGF 282
Query: 543 LVGDKEHPQHEKIYEYLEE 561
E + LEE
Sbjct: 283 SQNGDPEKALETFFCMLEE 301
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/690 (34%), Positives = 366/690 (53%), Gaps = 99/690 (14%)
Query: 42 NSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDL--HSGKQAHQQ 98
N+VI+ AR + A+ F S+ SL P +F + + L ++ Q H
Sbjct: 125 NAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCS 184
Query: 99 AFIFGFHRDVFVSSALIDMYSKCGELS---DARKLFDEIPQR------------------ 137
G + V +AL+ +Y KC DARK+ DE+P +
Sbjct: 185 VLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDV 244
Query: 138 --IRNI---------VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
R++ V W +M++GYV + A EA LF+ +LE V +
Sbjct: 245 GAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLER------------VPL 292
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIK--RGFDSEVG--VGNTLIDAYARGGHVDVS 242
D SVLSAC+ V + + HG +I+ F E V N L+ Y++ G++ V+
Sbjct: 293 DEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVA 352
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM---------------------- 280
R++FD M KD V+WN+I++ Y ++ +A++VF++M
Sbjct: 353 RRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAE 412
Query: 281 --------VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
++S +VK T + + A LG L+ GK +H ++++ E S G ++I
Sbjct: 413 DALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALI 472
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
MY +CG V A F M + SW AMI+ G H REAL+LF +M+ G+ P+ I
Sbjct: 473 TMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRI 532
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
+F++VL+AC+H+GLV EG+ + +M +F I PG +HY ++DLLGRAG++ EA DLI+
Sbjct: 533 SFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKT 592
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M + +W ++L CR +++LG AA +LF++ P + G ++LLSN Y+ AG W D
Sbjct: 593 MPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDA 652
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R R LM++R + K PG S +E KVH FLVGD +HP+ ++Y++LE + K++++GYV
Sbjct: 653 ARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYV 712
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D V+HD++ +KE L HSE+LA NLR+C DCH I +
Sbjct: 713 PDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAIMFM 772
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK V REIVVRD +RFH+FKDG CSCG+YW
Sbjct: 773 SKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 174/366 (47%), Gaps = 38/366 (10%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN++I+ G +VEA F M + TF + +C+ + GK H Q
Sbjct: 262 WNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQII 321
Query: 101 I----FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
F + V++AL+ YSKCG ++ AR++FD + ++++VSW ++L+GYV++
Sbjct: 322 RLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNM--TLKDVVSWNTILSGYVESSC 379
Query: 157 AREALLLFKEFLLEESEC----------GGASEN---------SDNVFVDSVAIASVLSA 197
+A+ +F+E + GG +E+ S+NV A ++A
Sbjct: 380 LDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAA 439
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C + + HG +++ GF+ GN LI YAR G V + +F M D+V+W
Sbjct: 440 CGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSW 499
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N++I+ Q+G EAL++FD+MV + + + ++ VL A H G++ G +
Sbjct: 500 NAMISALGQHGHGREALELFDRMV-AEGIYPDRISFLTVLTACNHSGLVDEGFRYFES-- 556
Query: 318 KMDLEESVIVG----TSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRA 372
M + +I G T +ID+ + G++ AR M E W A+++G CR
Sbjct: 557 -MKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSG----CRT 611
Query: 373 REALDL 378
++L
Sbjct: 612 SGDMEL 617
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 134/562 (23%), Positives = 225/562 (40%), Gaps = 132/562 (23%)
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+++L+ Y+ L A FD +P R+ V ++++ Y + +A A+ +F+ L
Sbjct: 91 ATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLL-- 148
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNT 228
S ++ D + ++LSA + V A H V+K G + V N
Sbjct: 149 ---------ASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNA 199
Query: 229 LIDAYARGGHVDVSR---KVFDGMIEKDAVT----------------------------- 256
L+ Y + + +R KV D M KD +T
Sbjct: 200 LVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFD 259
Query: 257 --WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
WN++I+ Y +G+A EA ++F +MV V + T ++VL A A++G+ GK +H
Sbjct: 260 VVWNAMISGYVHSGMAVEAFELFRRMVLER-VPLDEFTFTSVLSACANVGLFAHGKSVHG 318
Query: 315 QVIKMD----LEESVIVGTSIIDMYCKCGQVDLARKAFN--------------------- 349
Q+I++ E ++ V +++ Y KCG + +AR+ F+
Sbjct: 319 QIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESS 378
Query: 350 ----------QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+M KN SW M++GY A +AL LF KM V+P T+ ++
Sbjct: 379 CLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIA 438
Query: 400 ACS-----------HAGLVQEGWHWLNTMGHE-----------------FNIEPGVE--H 429
AC H +VQ G+ N+ G+ F + P ++
Sbjct: 439 ACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVS 498
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGM---KVKADFVVWGSLLGACRIHKNVDLGEI---AAK 483
+ M+ LG+ G +EA +L + M + D + + ++L AC VD G + K
Sbjct: 499 WNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMK 558
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG------ 537
+ F + P Y L+ ++ AGR + R L+K TP L G
Sbjct: 559 RDFGIIPGEDHYTRLI-DLLGRAGR---IGEARDLIKTMPFEPTPSIWEAILSGCRTSGD 614
Query: 538 ---KVHAFLVGDKEHPQHEKIY 556
HA K PQH+ Y
Sbjct: 615 MELGAHAADQLFKMTPQHDGTY 636
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 133/292 (45%), Gaps = 24/292 (8%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M L S ++++S + S +F + KN + SW +++ GG + +AL+
Sbjct: 359 MTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNEL-SWMVMVSGYVHGGFAEDALKL 417
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F+ MR ++ P T+ AI +C L L GKQ H GF +ALI MY++
Sbjct: 418 FNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYAR 477
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG + +A +F +P + VSW +M++ Q+ + REAL LF + E
Sbjct: 478 CGAVKEAHLMFLVMPN--IDSVSWNAMISALGQHGHGREALELFDRMVAE---------- 525
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF-VIKRGFDSEVGVGN--TLIDAYARGG 237
++ D ++ +VL+AC+ + V EG F +KR F G + LID R G
Sbjct: 526 --GIYPDRISFLTVLTACNHSGL--VDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAG 581
Query: 238 HVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNG---LAAEALDVFDQMVKSTD 285
+ +R + M E W +I++ +G L A A D +M D
Sbjct: 582 RIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHD 633
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/654 (34%), Positives = 363/654 (55%), Gaps = 47/654 (7%)
Query: 16 VDKHSTNTNLTT---LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPT 72
+D + N +L +F+ +++ +V W +I + G + + + F M P
Sbjct: 187 IDMFARNGDLVAAQRVFDGLIERTSVV-WTLLITRYVQAGCASKVVELFLHMLDDGFEPD 245
Query: 73 RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG---ELSDARK 129
+ I +C+ L + G+Q H A G D VS L+DMY+K + ARK
Sbjct: 246 GYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARK 305
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQND-NAREALLLFKEFLLEESECGGASENSDNVFVDS 188
+F +P+ N++SWT++++GYVQ+ + LF+E L ++++ +
Sbjct: 306 VFKTMPRH--NVMSWTALISGYVQSGVQENNVMALFREML------------NESIRPNH 351
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
+ +++L AC+ ++ H V+K VGN L+ YA G ++ +RK FD
Sbjct: 352 ITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQ 411
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
+ E + ++ + + N + ++ D V + T +++L A A +G+L
Sbjct: 412 LYETNILSMSPDVETERNNASCSSKIEGMDDGVST-------FTFASLLSAAASVGLLTK 464
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
G+ +H +K + S++ MY +CG ++ A +AF++MK+ NV SWT++I+G
Sbjct: 465 GQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAK 524
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H A++AL +F+ MI AGV+PN +T+++VLSACSH GLV+EG +M + + P +E
Sbjct: 525 HGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRME 584
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HY C+VDLL R+G ++EA I M KAD +VW +LL ACR + N ++GEIAA + L
Sbjct: 585 HYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINL 644
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
EP + +VLLSN+YA+AG W++V R RSLM+++ L+K G S +++ +H F GD
Sbjct: 645 EPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTS 704
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
HP IY L L +++++GYV D + V+HD+ +E KE L HSEK+A
Sbjct: 705 HPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTS 764
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH+ I+ ISK REI++RDS RFH KDG+CSCG+YW
Sbjct: 765 ATKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 225/492 (45%), Gaps = 74/492 (15%)
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHR----------DVFVSSALIDMYSKCGELSDARKLF 131
SC A L S +A HR D V+++L+ MYSKCG + AR++F
Sbjct: 40 SCDAAKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVF 99
Query: 132 DEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAI 191
D++ +R++VSWT+M + +N RE+ L N F +
Sbjct: 100 DQMCG-VRDLVSWTAMASCLARNGAERES--------LRLLGEMLELGLRPNAFT----L 146
Query: 192 ASVLSACSRVTVNGVTEG-AHGFVIKRGF-DSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
+ AC + + G GFV+K GF ++V VG LID +AR G + +++VFDG+
Sbjct: 147 CAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGL 206
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
IE+ +V W +I Y Q G A++ +++F M+ + + ++S+++ A LG +RLG
Sbjct: 207 IERTSVVWTLLITRYVQAGCASKVVELFLHMLDD-GFEPDGYSMSSMISACTELGSVRLG 265
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCG---QVDLARKAFNQMKEKNVRSWTAMIAGY 366
+ +H +++ L V ++DMY K ++ ARK F M NV SWTA+I+GY
Sbjct: 266 QQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGY 325
Query: 367 GMH-CRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGWHWL 414
+ + LF +M+ +RPN+IT+ ++L AC+ HA +++ +
Sbjct: 326 VQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHV 385
Query: 415 NTMGHEFNIEPGVEHY---GCM------VDLLGRAGKLKEAYDL------------IEGM 453
N +G+ V Y GCM D L L + D+ IEGM
Sbjct: 386 NVVGNAL-----VSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGM 440
Query: 454 KVKADFVVWGSLLGACR----IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
+ SLL A + K L ++ K F ++ G L ++YA G
Sbjct: 441 DDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFR---SDQGISNSLVSMYARCGYL 497
Query: 510 EDVERTRSLMKN 521
ED R MK+
Sbjct: 498 EDACRAFDEMKD 509
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 244/517 (47%), Gaps = 55/517 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC--SA 85
+F++ ++ SW ++ + LAR G E+LR M +L L P T A ++C
Sbjct: 98 VFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQE 157
Query: 86 LHDLHSGKQAHQQAFIFGF-------HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
L L G + GF DV V ALIDM+++ G+L A+++FD + +R
Sbjct: 158 LFRLAGG-------VVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERT 210
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
V WT ++T YVQ A + + LF L D D +++S++SAC
Sbjct: 211 S--VVWTLLITRYVQAGCASKVVELFLHML------------DDGFEPDGYSMSSMISAC 256
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR---GGHVDVSRKVFDGMIEKDAV 255
+ + + + H ++ G S+ V L+D YA+ ++ +RKVF M + +
Sbjct: 257 TELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVM 316
Query: 256 TWNSIIAIYAQNGLAA-EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
+W ++I+ Y Q+G+ + +F +M+ + ++ N +T S +L A A+L G+ IH
Sbjct: 317 SWTALISGYVQSGVQENNVMALFREMLNES-IRPNHITYSNLLKACANLSDQDSGRQIHA 375
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY--GMHCRA 372
V+K + +VG +++ MY + G ++ ARKAF+Q+ E N+ S + + C +
Sbjct: 376 HVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSS 435
Query: 373 R-EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEH 429
+ E +D GV + TF S+LSA + GL+ +G H L +M F + G+ +
Sbjct: 436 KIEGMD-------DGV--STFTFASLLSAAASVGLLTKGQKLHAL-SMKAGFRSDQGISN 485
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD--LGEIAAKKLFE 487
+V + R G L++A + MK + + W S++ H L L
Sbjct: 486 --SLVSMYARCGYLEDACRAFDEMK-DHNVISWTSIISGLAKHGYAKQALSMFHDMILAG 542
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRL 524
++PN+ Y +LS E E RS+ K+ L
Sbjct: 543 VKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGL 579
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 15/195 (7%)
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCK 337
+V S+D C+A L L + A G LRLG+ +H ++++ + L+ +V S++ MY K
Sbjct: 32 HLVLSSDHSCDAAKL---LTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSK 88
Query: 338 CGQVDLARKAFNQM-KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
CG V+ AR+ F+QM +++ SWTAM + + RE+L L +M++ G+RPN T +
Sbjct: 89 CGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCA 148
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGV----EHYGC-MVDLLGRAGKLKEAYDLIE 451
AC QE + + F ++ G GC ++D+ R G L A + +
Sbjct: 149 AARAC----FPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFD 204
Query: 452 GMKVKADFVVWGSLL 466
G+ ++ VVW L+
Sbjct: 205 GL-IERTSVVWTLLI 218
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/637 (37%), Positives = 355/637 (55%), Gaps = 78/637 (12%)
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFG------FHRDVFVSSALID 116
S+++++ PT S + SC+ L ++ KQ H Q + G FH + AL +
Sbjct: 3 SVKRIAKHPTISL----LNSCTTLKEM---KQIHAQLVVKGILNNPHFHGQFVATIALHN 55
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
+ L A KL + + + SM+ Y ++ ++ + L
Sbjct: 56 TTN----LDYANKLLNH--NNNPTLFTLNSMIRAYSKSSTPSKSFHFYANIL-------- 101
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF--DSEVGVG-------- 226
N++N+ D+ ++ C+++ + HG VIK GF D V G
Sbjct: 102 -HSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAEL 160
Query: 227 ---------------------NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+++A A+ G +D +RK+FD M E+D VTWN++IA YA
Sbjct: 161 GCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYA 220
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q G + EALDVF +++ VK N V++ VL A HL VL G+ +H V + + +V
Sbjct: 221 QCGRSREALDVF-HLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTV 279
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+GT+++DMY KCG VD A + F MKE+NV +W++ I G M+ E+LDLF M +
Sbjct: 280 TLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKRE 339
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
GV+PN ITF+SVL CS GLV+EG ++M + + I P +EHYG MVD+ GRAG+LKE
Sbjct: 340 GVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKE 399
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A + I M ++ W +LL ACR++KN +LGEIA +K+ ELE N G +VLLSNIYA+
Sbjct: 400 ALNFINSMPMRPHVGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYAD 459
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
WE V R MK + + K PG S++E+ G+VH F+VGDK HP++++I LEE++
Sbjct: 460 YKNWESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKC 519
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
L+ GYV + V+ D+++EEKE L HSEK+A NLR+C DC
Sbjct: 520 LRLSGYVANTNPVLFDIEEEEKEDALSKHSEKVAIAFGLISLKGVVPIRVVMNLRICWDC 579
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H V ++ISK+ +REI+VRD RFH+FKDG CSC DYW
Sbjct: 580 HNVAKMISKIFNREIIVRDRNRFHHFKDGECSCKDYW 616
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 21/238 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ ++++V +WN++IA A+ G S EAL F M+ + + + +C+ L
Sbjct: 200 MFDEMPERDHV-TWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQ 258
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+ H + V + +AL+DMY+KCG + A ++F + + RN+ +W+S
Sbjct: 259 VLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKE--RNVYTWSSA 316
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G N E+L LF + E + G + SVL CS V + V
Sbjct: 317 IGGLAMNGFGEESLDLFNDMKREGVQPNG------------ITFISVLKGCSVVGL--VE 362
Query: 208 EGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV-TWNSII 261
EG F R G ++ ++D Y R G + + + M + V W++++
Sbjct: 363 EGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALL 420
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/633 (37%), Positives = 365/633 (57%), Gaps = 35/633 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ ++ +V +WNS+I + EAL FS M + I + L +L
Sbjct: 344 RQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+G + H G+ ++ V + LIDMYSKC + F + ++++SWT+++ G
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF--LRMHDKDLISWTTVIAG 461
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y QND EAL LF++ + E +D + + S+L A S + + +
Sbjct: 462 YAQNDCHVEALELFRDVAKKRME------------IDEMILGSILRASSVLKSMLIVKEI 509
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H ++++G V + N L+D Y + ++ + +VF+ + KD V+W S+I+ A NG
Sbjct: 510 HCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 568
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+EA+++F +MV+ T + ++V L +L A A L L G+ IH +++ + +
Sbjct: 569 SEAVELFRRMVE-TGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA 627
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++DMY CG + A+ F++++ K + +T+MI YGMH + A++LF KM V P+
Sbjct: 628 VVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPD 687
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+I+F+++L ACSHAGL+ EG +L M HE+ +EP EHY C+VD+LGRA + EA++ +
Sbjct: 688 HISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFV 747
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
+ MK + VW +LL ACR H ++GEIAA++L ELEP N G VL+SN++A GRW
Sbjct: 748 KMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWN 807
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ-EV 569
DVE+ R+ MK + K PG S +E+ GKVH F DK HP+ ++IYE L E+ KL+ EV
Sbjct: 808 DVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREV 867
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GYV D V+H+VD+ EK L HSE++A NLRVC DCHT
Sbjct: 868 GYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFC 927
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+L+SK+ R+IV+RD+ RFH+F+ GLCSCGD W
Sbjct: 928 KLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 228/459 (49%), Gaps = 41/459 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ D+ F+WN++I G+ AL + +MR + S+FP +K+C+ L
Sbjct: 138 VFDEMPDRT-AFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D+ SG + H G+H F+ +AL+ MY+K +LS AR+LFD Q + V W S+
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF-QEKGDAVLWNSI 255
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
L+ Y + + E L LF+E + G + N S I S L+AC + +
Sbjct: 256 LSSYSTSGKSLETLELFREMHMT-----GPAPN-------SYTIVSALTACDGFSYAKLG 303
Query: 208 EGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H V+K SE+ V N LI Y R G + + ++ M D VTWNS+I Y Q
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
N + EAL+ F M+ + K + V++++++ A L L G +H VIK + ++
Sbjct: 364 NLMYKEALEFFSDMIAAGH-KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 422
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
VG ++IDMY KC +AF +M +K++ SWT +IAGY + EAL+LF + K
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 387 VRPNYITFVSVLSACS-----------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
+ + + S+L A S H ++++G L+T+ +VD
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG--LLDTVIQNE-----------LVD 529
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
+ G+ + A + E +K K D V W S++ + ++ N
Sbjct: 530 VYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGN 567
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 174/352 (49%), Gaps = 31/352 (8%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAF--IFGFHRDVFVSSALIDMYSKCGELSDARKLFD 132
F ++ C + G+Q H + F F D F++ L+ MY KCG L DA K+FD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 133 EIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIA 192
E+P R +W +M+ YV N AL L+ +E G +S
Sbjct: 141 EMPD--RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS------------FP 186
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK 252
++L AC+++ H ++K G+ S + N L+ YA+ + +R++FDG EK
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246
Query: 253 -DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
DAV WNSI++ Y+ +G + E L++F +M T N+ T+ + L A +LGK
Sbjct: 247 GDAVLWNSILSSYSTSGKSLETLELFREM-HMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 312 IHDQVIKMDLEES-VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
IH V+K S + V ++I MY +CG++ A + QM +V +W ++I GY +
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGW 411
+EAL+ F MI AG + + ++ S+++A HA +++ GW
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 144/314 (45%), Gaps = 20/314 (6%)
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
L F L E + SEN+ V A A VL C + H + K
Sbjct: 57 LACFDGVLTEAFQRLDVSENNSPV----EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPS 112
Query: 221 SEVG-VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
E+ + L+ Y + G +D + KVFD M ++ A WN++I Y NG A AL ++
Sbjct: 113 FELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN 172
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M + V + A+L A A L +R G +H ++K+ + + +++ MY K
Sbjct: 173 M-RVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND 231
Query: 340 QVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
+ AR+ F+ +EK + W ++++ Y ++ E L+LF +M G PN T VS L
Sbjct: 232 DLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSAL 291
Query: 399 SAC---SHAGLVQE-GWHWLNTMGHEFNIEPGVEHYGC--MVDLLGRAGKLKEAYDLIEG 452
+AC S+A L +E L + H E Y C ++ + R GK+ +A ++
Sbjct: 292 TACDGFSYAKLGKEIHASVLKSSTH------SSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 453 MKVKADFVVWGSLL 466
M AD V W SL+
Sbjct: 346 MN-NADVVTWNSLI 358
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 17/193 (8%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
N T + + +V SW S+I+ A G+ EA+ F M + L+ C +
Sbjct: 536 NMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILS 595
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI 141
+ ++L L+ G++ H GF + ++ A++DMY+ CG+L A+ +FD I + + +
Sbjct: 596 AAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER--KGL 653
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
+ +TSM+ Y + + A+ LF + +NV D ++ ++L ACS
Sbjct: 654 LQYTSMINAYGMHGCGKAAVELFDKM------------RHENVSPDHISFLALLYACSHA 701
Query: 202 TVNGVTEGAHGFV 214
G+ + GF+
Sbjct: 702 ---GLLDEGRGFL 711
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 29/209 (13%)
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL---GKCIHDQVIKM--DLEESVIVGTS 330
V + + DV N + A + G R G+ +H ++ K E + G
Sbjct: 63 VLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAG-K 121
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ MY KCG +D A K F++M ++ +W MI Y + AL L++ M GV
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 391 YITFVSVLSACS-----------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
+F ++L AC+ H+ LV+ G+H + G N +V + +
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYH---STGFIVN---------ALVSMYAK 229
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
L A L +G + K D V+W S+L +
Sbjct: 230 NDDLSAARRLFDGFQEKGDAVLWNSILSS 258
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 250/646 (38%), Positives = 356/646 (55%), Gaps = 59/646 (9%)
Query: 30 NKYVDKNNVF---------SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS--TFPC 78
N+ VD N+F SWNS+I+ GD A++ F M P RS ++
Sbjct: 80 NRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM------PERSVVSWTA 133
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFH-RDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
+ C SGK + + +D ++++ Y + G++ DA KLF ++P +
Sbjct: 134 MVNGC-----FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGK 188
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
N++SWT+M+ G QN+ + EAL LFK L C S S V++A
Sbjct: 189 --NVISWTTMICGLDQNERSGEALDLFKNML----RCCIKST--------SRPFTCVITA 234
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C+ + HG +IK GF E V +LI YA + SRKVFD + + W
Sbjct: 235 CANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVW 294
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
++++ Y+ N +AL +F M++++ + N T ++ L + + LG L GK +H +
Sbjct: 295 TALLSGYSLNKKHEDALSIFSGMLRNS-ILPNQSTFASGLNSCSALGTLDWGKEMHGVAV 353
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
K+ LE VG S++ MY G V+ A F ++ +K++ SW ++I G H R + A
Sbjct: 354 KLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFV 413
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN-IEPGVEHYGCMVDL 436
+F +MI+ P+ ITF +LSACSH G +++G M N I+ ++HY CMVD+
Sbjct: 414 IFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDI 473
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYH 496
LGR GKLKEA +LIE M VK + +VW +LL ACR+H +VD GE AA +F L+ + +
Sbjct: 474 LGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAY 533
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
VLLSNIYA+AGRW +V + R MK + K PG S V +RGK H F GD+ P +IY
Sbjct: 534 VLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIY 591
Query: 557 EYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------------- 599
E LE L KL+E+GY D S +HDV+ E+KE L HSE+LA
Sbjct: 592 EKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVM 651
Query: 600 -NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHTVI+LIS VV REIV+RD RFH+FK+G CSCGDYW
Sbjct: 652 KNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 189/395 (47%), Gaps = 27/395 (6%)
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
V + + +I Y++ L DA LFDE+P +R++VSW SM++G V+ + A+ LF E
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMP--VRDVVSWNSMISGCVECGDMNTAVKLFDE- 122
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN 227
+ E S V+ ++++ C R +G + A + + N
Sbjct: 123 MPERS---------------VVSWTAMVNGCFR---SGKVDQAERLFYQMPV-KDTAAWN 163
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
+++ Y + G VD + K+F M K+ ++W ++I QN + EALD+F M++ +K
Sbjct: 164 SMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCC-IK 222
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
+ + V+ A A+ +G +H +IK+ V S+I Y C ++ +RK
Sbjct: 223 STSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKV 282
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F++ + V WTA+++GY ++ + +AL +F M++ + PN TF S L++CS G +
Sbjct: 283 FDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTL 342
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
G ++ + + +E +V + +G + +A + + K V W S++
Sbjct: 343 DWGKE-MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIV 400
Query: 468 ACRIHKNVDLGEIAAKKLFEL--EPNNCGYHVLLS 500
C H + ++ L EP+ + LLS
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
++D AR+ FNQ+ +V +T MI GY R +AL+LF +M VR + +++ S++S
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEM---PVR-DVVSWNSMIS 105
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
C G + + M E V + MV+ R+GK+ +A L M VK D
Sbjct: 106 GCVECGDMNTAVKLFDEMP-----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-DT 159
Query: 460 VVWGSLLGACRIHKNVDLGEI-AAKKLFELEP 490
W S+ +H + G++ A KLF+ P
Sbjct: 160 AAWNSM-----VHGYLQFGKVDDALKLFKQMP 186
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/528 (42%), Positives = 321/528 (60%), Gaps = 17/528 (3%)
Query: 37 NVFSWNSVIADLA-RGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
N+ +N++I LA DS+E L + M + P T P +K+C+ + G++
Sbjct: 88 NLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEV 147
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H QA G DV+VS+ L+ MY+ C + ARK+FD PQR ++VSWT+M+ GYV+
Sbjct: 148 HGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQR--DLVSWTTMIQGYVKMG 205
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
ARE + LF E CG +N+ D + + VLS+C+R+ + H ++I
Sbjct: 206 FAREGVGLFFEM------CG------ENLQADGMTLVIVLSSCARLGDLRLGRKLHRYII 253
Query: 216 KRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+ + +V VGN L+D Y + G + +RKVF M K+ V+WNS+I+ AQ G E+L
Sbjct: 254 RNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESL 313
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+F +M + VK + VTL AVL + A+LGVL LGK +H + + + +G +++DM
Sbjct: 314 YMFRKM-QRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDM 372
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y KCG +D A F M K+V S+TAMI G MH + +ALDLF +M K G+ P+ +TF
Sbjct: 373 YAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTF 432
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
V VL+ACSH GLV+EG + M +N+ P +EHYGCMVDLLGRAG + EA + I M
Sbjct: 433 VGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMP 492
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
++ D V G+LLGAC+IH V+LGE KK+ ++EP G +VL+SNIY++A RW D +
Sbjct: 493 IEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALK 552
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
R MK R L KTPG S +EL G +H F GDK HP+ ++IY+ L+E+
Sbjct: 553 LRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEI 600
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/607 (38%), Positives = 343/607 (56%), Gaps = 70/607 (11%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA--RKLFDEIPQRIRNIVSWTSMLTG 150
KQ H F G + FV + L+ +K D R +F ++ N WT+++ G
Sbjct: 56 KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQV--EYPNPFLWTALIRG 113
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y E++LL+ S + S ++L ACS +
Sbjct: 114 YALQGPFMESVLLYN------------SMRRQGIGPVSFTFTALLKACSAALDVNLGRQV 161
Query: 211 HG-FVIKRGFDSEVGVGNTLID-------------------------------AYARGGH 238
H ++ GF S++ VGNTLID AYA+ G+
Sbjct: 162 HTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGN 221
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
++ + ++FDG+ KD V W +++ YAQN EAL+VF++M ++ VK + VTL V+
Sbjct: 222 MEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERM-QAAGVKTDEVTLVGVIS 280
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEES--VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
A A LG + + D + + V+VG+++IDMY KCG V+ A K F +M+E+NV
Sbjct: 281 ACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNV 340
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
S+++MI G+ MH A A++LF +M+K ++PN +TF+ VL+ACSHAG+V++G
Sbjct: 341 YSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAM 400
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M + P +HY CMVDLLGRAG+L+EA +L++ M + VWG+LLGACRIH N D
Sbjct: 401 MEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPD 460
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVE-L 535
+ +IAA LFELEPN G ++LLSNIYA+AGRW+DV + R LM+ + L K PG S VE
Sbjct: 461 MAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGK 520
Query: 536 RGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHS 595
+G +H F GD HP+ +I + LE+L +L+ +GY +++SV +D+ EEK+ L HS
Sbjct: 521 KGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHS 580
Query: 596 EKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGL 637
EKLA NLR+C DCH+V+ S++ REIVVRD+ RFH+F+DG
Sbjct: 581 EKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGR 640
Query: 638 CSCGDYW 644
CSCG++W
Sbjct: 641 CSCGNFW 647
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 173/375 (46%), Gaps = 59/375 (15%)
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS-----RKV 245
+ SVL C+ + N V + H + ++G + V L+ + +DV R V
Sbjct: 42 LVSVLHGCTHI--NQVKQ-VHAHIFRKGLEQCCFVLAKLLRTLTK---LDVPMDPYPRLV 95
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F + + W ++I YA G E++ +++ M + + + T +A+L A +
Sbjct: 96 FQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSM-RRQGIGPVSFTFTALLKACSAALD 154
Query: 306 LRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS------ 358
+ LG+ +H Q I + + VG ++IDMY KCG + + F++M +++V S
Sbjct: 155 VNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIV 214
Query: 359 -------------------------WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
WTAM+ GY + R REAL++F +M AGV+ + +T
Sbjct: 215 AYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVT 274
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP--GVEHYGCMVDLLGRAGKLKEAYDLIE 451
V V+SAC+ G + +W+ + + P V ++D+ + G +++AY + E
Sbjct: 275 LVGVISACAQLGAAKYA-NWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFE 333
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF------ELEPNNCGYHVLLSNIYAN 505
M+ + + + S++ +H AA +LF E++PN + +L+ ++
Sbjct: 334 RMEER-NVYSYSSMIVGFAMHGLAG----AAMELFDEMLKTEIKPNRVTFIGVLTAC-SH 387
Query: 506 AGRWEDVERTRSLMK 520
AG E ++ ++M+
Sbjct: 388 AGMVEQGQQLFAMME 402
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/645 (35%), Positives = 366/645 (56%), Gaps = 35/645 (5%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP 77
KH +F + +++V ++N+++ ++ G EAL F++MR+ L TR TF
Sbjct: 187 KHGLLAAARRVFQEMPHRDSV-TYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFS 245
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
+ + + DL G+Q H +VFV+++L+D YSKC L + +KLF E+ +R
Sbjct: 246 TVLTVATGVGDLCLGRQVHGLV-ARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIER 304
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ VS+ M+ GY N A L LF+E S + ++ AS+LS
Sbjct: 305 --DNVSYNVMIAGYAWNRCASIVLRLFREM------------QSLSFDRQALPYASLLSV 350
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
V G+ + H ++ G SE VGN LID Y++ G +D ++ F +K V+W
Sbjct: 351 AGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSW 410
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
++I QNG EAL +F M + + + T S+ + A ++L ++ LG+ +H +I
Sbjct: 411 TAMITGCVQNGQQEEALQLFCGM-RRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLI 469
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ SV G++++DMY KCG +D A + F++M E+N SW A+I+ Y + +A+ A+
Sbjct: 470 RSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIK 529
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
+F M+ G +P+ +TF+SVLSACSH GL +E + M +E+ I P EHY C++D L
Sbjct: 530 MFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTL 589
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GR G+ + +++ M + D ++W S+L +CR H N DL +AA+KLF + + +V
Sbjct: 590 GRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYV 649
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
+LSNI+A AG+WED + +M++R L K G+S VE++ KV++F D+ +P +I +
Sbjct: 650 ILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKD 709
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
LE L ++ + GY D + + VD + K +L+ HSE+LA
Sbjct: 710 ELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMK 769
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NL C DCH+ I+++SK+V+R+I+VRDS RFH+FKDG CSCGDYW
Sbjct: 770 NLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 167/336 (49%), Gaps = 26/336 (7%)
Query: 86 LHDL-HSGKQAHQQAFIFGF-HRD-VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
LH L SG+ A +A HR+ F + ++ YS+ G+LS A LF P +R+ V
Sbjct: 41 LHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDAV 100
Query: 143 SWTSMLTGYVQNDNAR--EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS---A 197
+WT M+ + AR +A+ LF++ L E V D V +A+VL+ A
Sbjct: 101 TWTVMIGAFASAPGARASDAVSLFRDMLRE------------GVAPDRVTVATVLNLPPA 148
Query: 198 CSRVTVNGVTEGAHGFVIKRGF-DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
+ H F +K G S V V NTL+DAY + G + +R+VF M +D+VT
Sbjct: 149 SGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVT 208
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
+N+++ ++ G AEALD+F M + + T S VL +G L LG+ +H V
Sbjct: 209 YNAMMMGCSKEGSHAEALDLFAAM-RRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLV 267
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
+ +V V S++D Y KC +D +K F++M E++ S+ MIAGY + A L
Sbjct: 268 ARAT-SSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVL 326
Query: 377 DLFYKMIKAGVRPNYITFVSVLS---ACSHAGLVQE 409
LF +M + + S+LS + H G+ ++
Sbjct: 327 RLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQ 362
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/665 (34%), Positives = 355/665 (53%), Gaps = 73/665 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ +++ V SWN++I+ ++ G V+ L F M +P T+ + +C++
Sbjct: 234 IFNRMPERDEV-SWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTS 292
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL G H + D+ + LIDMY+KCG L A+++F + R + +SW S+
Sbjct: 293 DLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSL--REHDHISWNSL 350
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+TG V +AL+LF + +V +D + ++L CS
Sbjct: 351 ITGVVHFGLGEDALILFNQM------------RRSSVVLDEFILPTILGVCSGPDYASTG 398
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYA-------------------------------RG 236
E HG+ IK G S VGN +I YA R
Sbjct: 399 ELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRS 458
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G + +R FD M E++ VTWNS+++ Y QNG + E L ++ M +S V+ + +T +
Sbjct: 459 GDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSM-RSNGVQPDWITFTTS 517
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
+ A A L +++LG + K L +V V SI+ MY +CG + A+ F+ + +K++
Sbjct: 518 IRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDL 577
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW AM+A + + + +D F M+K +PN+I++VSVLS CSH GLV EG H+ ++
Sbjct: 578 ISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDS 637
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M F I P EH+ CMVDLLGRAG L++A DLIEGM K + VW +LLG+CR+H ++
Sbjct: 638 MTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLR 697
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
L E AAKKL EL+ +VLLSN+Y+ +G ++V R LMK + + + G S +E+
Sbjct: 698 LAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVD 757
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
+VH F V + HPQ +++Y LEE+ +++ G + S +H + + HSE
Sbjct: 758 NRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYITVESSVHR--------SKKYHSE 809
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLRVC DCH VI+L+S V RE+++RD RFH+FKDG+C
Sbjct: 810 KLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLLSLVTSRELIMRDGYRFHHFKDGIC 869
Query: 639 SCGDY 643
SC DY
Sbjct: 870 SCKDY 874
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 135/520 (25%), Positives = 233/520 (44%), Gaps = 67/520 (12%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS----TFPCAIKSCSALHDLHSGKQA 95
SW ++I+ ++ G + FS M + + ++ +F +K+C +L D Q
Sbjct: 109 SWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQL 168
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H GF + + ++++ MY KCG++ A +F +I + ++ W SM+ GY Q
Sbjct: 169 HALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIER--PSLFCWNSMIYGYSQMY 226
Query: 156 NAREALLLFKEFLLEESECG-----------GASENSDNVFVDS---------VAIASVL 195
+AL +F + E E G +FV+ + SVL
Sbjct: 227 GPYKALQIFNR-MPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVL 285
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
SAC+ + H +++ ++ GN LID YA+ G +D++++VF + E D +
Sbjct: 286 SACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHI 345
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+WNS+I GL +AL +F+QM +S+ V + L +L + G+ +H
Sbjct: 346 SWNSLITGVVHFGLGEDALILFNQMRRSS-VVLDEFILPTILGVCSGPDYASTGELLHGY 404
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVD-------------------------------LA 344
IK + S VG +II MY KCG D A
Sbjct: 405 TIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKA 464
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R F+ M E+N+ +W +M++ Y + + E L L+ M GV+P++ITF + + AC+
Sbjct: 465 RGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADL 524
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGS 464
+V+ G + T +F + V +V + R G +KEA + + + K D + W +
Sbjct: 525 AIVKLGMQ-VVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDK-DLISWNA 582
Query: 465 LLGACRIH----KNVDLGEIAAKKLFELEPNNCGYHVLLS 500
+L A + K +D E K E +PN+ Y +LS
Sbjct: 583 MLAAFAQNGLGIKVIDTFEDMLKT--ECKPNHISYVSVLS 620
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 216/461 (46%), Gaps = 56/461 (12%)
Query: 98 QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA 157
Q F HR++F + +I +SDA KLFDE+P R+++ VSWT+M++GY QN
Sbjct: 64 QVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFH 123
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
+ F ++ ++ GG + D + SV+ AC + + + H V K
Sbjct: 124 SRSFETF-SLMIRDTNDGGKN-------YDPFSFTSVMKACGSLGDSRLAIQLHALVSKL 175
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSR-------------------------------KVF 246
GF E + N+++ Y + G VD++ ++F
Sbjct: 176 GFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIF 235
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ M E+D V+WN++I+I++Q+G + L +F +M N +T +VL A A L
Sbjct: 236 NRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQ-GFSPNFMTYGSVLSACASTSDL 294
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
+ G +H ++++M+ ++ G +IDMY KCG +DLA++ F ++E + SW ++I G
Sbjct: 295 KWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGV 354
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+AL LF +M ++ V + ++L CS G + H + I+ G
Sbjct: 355 VHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTG-----ELLHGYTIKSG 409
Query: 427 VEHYG----CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
+ ++ + + G +A DL+ + + + W +++ A ++ D+G+ A
Sbjct: 410 MGSSAPVGNAIITMYAKCGDTDKA-DLVFRLMPLRNTISWTAMITA--FSRSGDIGK--A 464
Query: 483 KKLFELEP--NNCGYHVLLSNIYANAGRWEDVERTRSLMKN 521
+ F++ P N ++ +LS N E ++ S+ N
Sbjct: 465 RGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSN 505
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 244/650 (37%), Positives = 359/650 (55%), Gaps = 114/650 (17%)
Query: 53 DSVEALRAFSSMRKLSLTPTRSTFPCAIKSC-----------------------SALHDL 89
D + + + M+ + P +P IKS +A+ D+
Sbjct: 10 DHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGIGFHAHVLKLGHGSDAFVRNAVIDM 69
Query: 90 HSGKQAHQQAFIFGF-----------------HRDVFVSSALIDMYSKCGELSDARKLFD 132
++ K A A + G+ R+V +A++ Y+K +L AR+ FD
Sbjct: 70 YARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFD 129
Query: 133 EIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIA 192
+P+R ++VSW +ML+GY QN A EAL LF E L GA NS
Sbjct: 130 CMPER--SVVSWNAMLSGYAQNGLAEEALRLFDEML-------GAYRNS----------- 169
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK 252
VT N +I AY R G +D +RK+F+ M +
Sbjct: 170 -------------VT------------------WNAMISAYMRVGDLDSARKLFNTMPGR 198
Query: 253 DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI 312
+ VTWNS+IA YAQNG +A A+++F +M+ + + + VT+ +V+ A HLG L LG +
Sbjct: 199 NVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWV 258
Query: 313 HDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
+ + ++ S+ ++I MY +CG ++ A++ F +M ++V S+ +I+G+ H
Sbjct: 259 VRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHG 318
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC 432
EA++L M + G+ P+ +TF+ VL+ACSHAGL++EG ++ +P ++HY C
Sbjct: 319 VEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYAC 373
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNN 492
MVDLLGR G+L++A +E M ++ V+GSLL A RIHK V+LGE+AA KLFELEP+N
Sbjct: 374 MVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDN 433
Query: 493 CGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQH 552
G +LLSNIYA+AGRW+DVER R MK + KT G+S VE GK+H F+V D+ H +
Sbjct: 434 SGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERS 493
Query: 553 EKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------- 599
+ IY+ L EL K++E GY+ D + V+ DV++EEKE + HSEKLA
Sbjct: 494 DDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAV 553
Query: 600 -----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHT I++ISK+ R I+VRD+ RFH F DGLCSC DYW
Sbjct: 554 IRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 603
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 23/237 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSAL 86
LFN + NV +WNS+IA A+ G S A+ F M LTP T I +C L
Sbjct: 191 LFNT-MPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHL 249
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G + + +A+I MYS+CG + DA+++F E+ R++VS+ +
Sbjct: 250 GALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMAT--RDVVSYNT 307
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+++G+ + + EA+ L ++ + D V VL+ACS + +
Sbjct: 308 LISGFAAHGHGVEAINLM------------STMKEGGIEPDRVTFIGVLTACSHAGL--L 353
Query: 207 TEGAHGF-VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
EG F IK D + ++D R G ++ +++ + M +E A + S++
Sbjct: 354 EEGRKVFESIK---DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLL 407
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/629 (36%), Positives = 361/629 (57%), Gaps = 38/629 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD-LHSGKQA 95
++ SWN++I+ A G ++ F + + L P + T +++CS+L H Q
Sbjct: 971 DLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQI 1030
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H A G D FVS+ LID+YSK G++ +A LF + Q ++ SW +M+ GY+ +
Sbjct: 1031 HACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLF--VNQDGFDLASWNAMMHGYIVSG 1088
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH--GF 213
+ +AL L+ L++ES G N + +A+ A + G+ +G
Sbjct: 1089 DFPKALRLY--ILMQES---GERANQ-------ITLANAAKAAGGLV--GLKQGKQIQAV 1134
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V+KRGF+ ++ V + ++D Y + G ++ +R++F+ + D V W ++I+ +NG A
Sbjct: 1135 VVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHA 1194
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L + M + + V+ + T + ++ A + L L G+ IH +K++ V TS++D
Sbjct: 1195 LFTYHHM-RLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVD 1253
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY KCG ++ AR F + + SW AMI G H A EAL F +M GV P+ +T
Sbjct: 1254 MYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVT 1313
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
F+ VLSACSH+GLV E + +M + IEP +EHY C+VD L RAG+++EA +I M
Sbjct: 1314 FIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSM 1373
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
+A ++ +LL ACR+ + + G+ A+KL LEP++ +VLLSN+YA A +WE+V
Sbjct: 1374 PFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVA 1433
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
R++M+ + K PGFS V+L+ KVH F+ GD+ H + + IY +E + +++E GY+
Sbjct: 1434 SARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLP 1493
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
D + DV++E+KE +L HSEKLA NLRVCGDCH I+ IS
Sbjct: 1494 DTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYIS 1553
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
KV +RE+V+RD+ RFH+F+ G+CSCGDYW
Sbjct: 1554 KVFEREVVLRDANRFHHFRSGVCSCGDYW 1582
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 214/462 (46%), Gaps = 64/462 (13%)
Query: 28 LFNKYVDKN-NVFSWNSVI---ADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
LF+ D + ++ +WN+++ AD AR G F +R+ ++ TR T K C
Sbjct: 683 LFDTTPDTSRDLVTWNAILSAHADKARDG-----FHLFRLLRRSFVSATRHTLAPVFKMC 737
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ + H A G DVFV+ AL+++Y+K G + +AR LFD + +R++V
Sbjct: 738 LLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMG--LRDVVL 795
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W M+ YV EALLLF EF N + D V + C+ V
Sbjct: 796 WNVMMKAYVDTGLEYEALLLFSEF------------NRTGLRPDDVTL------CTLARV 837
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ + +K+ + AY G + + DG D + WN ++
Sbjct: 838 VKSKQNVLEWQLKQ------------LKAY--GTKLFMYDDDDDG---SDVIAWNKTLSW 880
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
+ Q G EA+D F M+ S V C+ +T +L +A L L LGK IH V++ L++
Sbjct: 881 FLQRGETWEAVDCFVDMINSR-VACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQ 939
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
V VG +I+MY K G V AR F QM E ++ SW MI+G + ++ +F ++
Sbjct: 940 VVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLL 999
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV--EHY--GCMVDLLGR 439
+ G+ P+ T SVL ACS G G H L T H ++ GV + + ++D+ +
Sbjct: 1000 RGGLLPDQFTVASVLRACSSLG---GGCH-LATQIHACAMKAGVVLDSFVSTTLIDVYSK 1055
Query: 440 AGKLKEA---------YDLIEGMKVKADFVVWGSLLGACRIH 472
+GK++EA +DL + ++V G A R++
Sbjct: 1056 SGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLY 1097
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 216/445 (48%), Gaps = 24/445 (5%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
++V +WN ++ + G++ EA+ F M + TF + + L+ L GKQ
Sbjct: 869 SDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQI 928
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H G + V V + LI+MY K G +S AR +F ++ + ++VSW +M++G +
Sbjct: 929 HGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNE--VDLVSWNTMISGCALSG 986
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG---VTEGAHG 212
++ +F + L GG + D +ASVL ACS ++ G + H
Sbjct: 987 LEECSVGMFVDLLR-----GG-------LLPDQFTVASVLRACS--SLGGGCHLATQIHA 1032
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+K G + V TLID Y++ G ++ + +F D +WN+++ Y +G +
Sbjct: 1033 CAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPK 1092
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL ++ M +S + + N +TL+ A L L+ GK I V+K + V + ++
Sbjct: 1093 ALRLYILMQESGE-RANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVL 1151
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG+++ AR+ FN++ + +WT MI+G + + AL ++ M + V+P+
Sbjct: 1152 DMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEY 1211
Query: 393 TFVSVLSACSHAGLVQEGWH-WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
TF +++ ACS +++G NT+ +P V +VD+ + G +++A L +
Sbjct: 1212 TFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFK 1269
Query: 452 GMKVKADFVVWGSLLGACRIHKNVD 476
+ W +++ H N +
Sbjct: 1270 RTNT-SRIASWNAMIVGLAQHGNAE 1293
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 178/398 (44%), Gaps = 52/398 (13%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++ A DL GK+AH + G H D F+++ LI MYSKCG LS ARKLFD P R
Sbjct: 633 LRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSR 692
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV--AIASVLSA 197
++V+W ++L+ + D AR+ LF+ LL S FV + +A V
Sbjct: 693 DLVTWNAILSAHA--DKARDGFHLFR--LLRRS------------FVSATRHTLAPVFKM 736
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C E HG+ +K G +V V L++ YA+ G + +R +FDGM +D V W
Sbjct: 737 CLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLW 796
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N ++ Y GL EAL +F + + T ++ + VTL + + V+
Sbjct: 797 NVMMKAYVDTGLEYEALLLFSEFNR-TGLRPDDVTLCTLARVVKS----------KQNVL 845
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ L++ GT + MY +V +W ++ + EA+D
Sbjct: 846 EWQLKQLKAYGTKLF-MYDD------------DDDGSDVIAWNKTLSWFLQRGETWEAVD 892
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCM 433
F MI + V + +TFV +LS + ++ L H + G++ C+
Sbjct: 893 CFVDMINSRVACDGLTFVVMLSVVAGLNCLE-----LGKQIHGIVVRSGLDQVVSVGNCL 947
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
+++ + G + A + M + D V W +++ C +
Sbjct: 948 INMYVKTGSVSRARTVFWQMN-EVDLVSWNTMISGCAL 984
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 155/323 (47%), Gaps = 22/323 (6%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D ++ SWN+++ GD +ALR + M++ + T A K+ L L GK
Sbjct: 1070 DGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGK 1129
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q GF+ D+FV S ++DMY KCGE+ AR++F+EIP + V+WT+M++G V+
Sbjct: 1130 QIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPS--PDDVAWTTMISGCVE 1187
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N AL + L + V D A+++ ACS +T H
Sbjct: 1188 NGQEEHALFTYHHMRLSK------------VQPDEYTFATLVKACSLLTALEQGRQIHAN 1235
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+K + V +L+D YA+ G+++ +R +F +WN++I AQ+G A EA
Sbjct: 1236 TVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEA 1295
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD----LEESVIVGT 329
L F++M KS V + VT VL A +H G++ ++ M +E + +
Sbjct: 1296 LQFFEEM-KSRGVTPDRVTFIGVLSACSHSGLVSEA---YENFYSMQKIYGIEPEIEHYS 1351
Query: 330 SIIDMYCKCGQVDLARKAFNQMK 352
++D + G++ A K + M
Sbjct: 1352 CLVDALSRAGRIREAEKVISSMP 1374
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + + + SWN++I LA+ G++ EAL+ F M+ +TP R TF + +CS H
Sbjct: 1269 KRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACS-----H 1323
Query: 91 SG--KQAHQQAF----IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
SG +A++ + I+G ++ S L+D S+ G + +A K+ +P
Sbjct: 1324 SGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMP 1374
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/656 (33%), Positives = 361/656 (55%), Gaps = 70/656 (10%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S ++++S K + NL F++ +++V S+N+ IA + E+L F M++
Sbjct: 91 SWNALLSAYAKSGSIQNLKATFDRMPFRDSV-SYNTTIAGFSGNSCPQESLELFKRMQRE 149
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
PT T + + + L DL GKQ H + F +VF+ +AL DMY+KCGE+ A
Sbjct: 150 GFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQA 209
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R LFD + ++ N+VSW M++GY +N + + L + L D
Sbjct: 210 RWLFDCLTKK--NLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGH------------MPD 255
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
V ++ T+I AY + G VD +R+VF
Sbjct: 256 QVTMS-----------------------------------TIIAAYCQCGRVDEARRVFS 280
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
EKD V W +++ YA+NG +AL +F++M+ ++ ++ TLS+V+ + A L L
Sbjct: 281 EFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE-HIEPDSYTLSSVVSSCAKLASLH 339
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
G+ +H + I L +++V +++IDMY KCG +D AR FN M +NV SW AMI G
Sbjct: 340 HGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCA 399
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+ ++AL+LF M++ +P+ +TF+ +LSAC H +++G + +++ ++ + P +
Sbjct: 400 QNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTL 459
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
+HY CMV+LLGR G++++A LI+ M DF++W +LL C ++ E+AA+ LFE
Sbjct: 460 DHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFE 519
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
L+P +++LSN+YA+ GRW+DV R+LMK++ + K GFS +E+ +VH F D+
Sbjct: 520 LDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDR 579
Query: 548 EHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------- 599
HP+ E IYE L L KLQE G+ + V+HDV ++EK ++ HSEKLA
Sbjct: 580 THPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKK 639
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
N+R+C DCH ++ S+++ R+I++RDS RFH+F G CSC D W
Sbjct: 640 PNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 137/522 (26%), Positives = 235/522 (45%), Gaps = 110/522 (21%)
Query: 70 TPTRSTFPCAIKSCSALHDLHSGK--QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
T T + + C ++++ K Q+H + +F D F+ + L+ +Y+K G+L DA
Sbjct: 19 TATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQ-PTDSFLHNQLLHLYAKFGKLRDA 77
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGY-----VQNDNAREALLLFKEFLLEESECGGASENS- 181
+ LFD++ + R+ SW ++L+ Y +QN A + F++ + + G S NS
Sbjct: 78 QNLFDKMLK--RDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSC 135
Query: 182 -------------DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
+ I S+L+A +++ + HG +I R F V + N
Sbjct: 136 PQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNA 195
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
L D YA+ G ++ +R +FD + +K+ V+WN +I+ YA+NG + + + QM
Sbjct: 196 LTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQM-------- 247
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
RL + DQV ++II YC+CG+VD AR+ F
Sbjct: 248 ------------------RLSGHMPDQVTM----------STIIAAYCQCGRVDEARRVF 279
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----H 403
++ KEK++ WTAM+ GY + R +AL LF +M+ + P+ T SV+S+C+ H
Sbjct: 280 SEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLH 339
Query: 404 AGLVQEGWHWLNTMGHE-----------------------FNIEP--GVEHYGCMVDLLG 438
G G L + + FN+ P V + M+
Sbjct: 340 HGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCA 399
Query: 439 RAGKLKEAYDLIEGM---KVKADFVVWGSLLGACRIHKN-VDLGEIAAKKLFELEPNNCG 494
+ G K+A +L E M K K D V + +L AC +H N ++ G+ + F+ N G
Sbjct: 400 QNGHDKDALELFENMLQQKFKPDNVTFIGILSAC-LHCNWIEQGQ----EYFDSISNQHG 454
Query: 495 ------YHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
++ + N+ GR +E+ +L+KN +A P F
Sbjct: 455 MTPTLDHYACMVNLLGRTGR---IEQAVALIKN--MAHDPDF 491
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/539 (38%), Positives = 326/539 (60%), Gaps = 36/539 (6%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
LS AR +F IP + +++ +++ + + + F S S+
Sbjct: 38 LSYARYVFSRIPSP--DTIAYNTIIRSHSRFFPSHSLFYFF-------------SMRSNG 82
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ +D+ VL ACSR+ +N H ++K G DS++ V N LI Y G ++++
Sbjct: 83 IPLDNFTFPFVLKACSRLQIN---LHLHSLIVKYGLDSDIFVQNALICVYGYCGSLEMAV 139
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
KVFD M E+D+V+W+++IA + NG A+EALD+F++M V + VT+ +V+ AI+HL
Sbjct: 140 KVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHL 199
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G L LG+ + + ++ L SV +GT++IDM+ +CG +D + F +M +NV +WTA+I
Sbjct: 200 GDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALI 259
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
G G+H R+ EAL +F+ M K+GV+P+Y+TF VL ACSH GLV+EGW ++ + +
Sbjct: 260 NGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYRM 319
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
+P ++HYGCMVD+LGRAG L EAYD +E M +K + ++W +LLGAC H N+ L E
Sbjct: 320 DPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKA 379
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
K+ ++ + G VLLSN+Y AGRW + RS M+ +R+ K PG S + + +H F+
Sbjct: 380 KISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFV 439
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
GD HPQ E I ++L + L+ GY+ +V+HD+++EE+E +L HSEKLA
Sbjct: 440 SGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFA 499
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH+ ++ IS +R+I++RD RFH+F+ GLCSC DYW
Sbjct: 500 ILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKIIIRDRNRFHHFEKGLCSCHDYW 558
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/656 (33%), Positives = 361/656 (55%), Gaps = 70/656 (10%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S ++++S K + NL F++ +++V S+N+ IA + E+L F M++
Sbjct: 91 SWNALLSAYAKSGSIQNLKATFDRMPFRDSV-SYNTTIAGFSGNSCPQESLELFKRMQRE 149
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
PT T + + + L DL GKQ H + F +VF+ +AL DMY+KCGE+ A
Sbjct: 150 GFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQA 209
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R LFD + ++ N+VSW M++GY +N + + L + L D
Sbjct: 210 RWLFDCLTKK--NLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGH------------MPD 255
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
V ++ T+I AY + G VD +R+VF
Sbjct: 256 QVTMS-----------------------------------TIIAAYCQCGRVDEARRVFS 280
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
EKD V W +++ YA+NG +AL +F++M+ ++ ++ TLS+V+ + A L L
Sbjct: 281 EFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE-HIEPDSYTLSSVVSSCAKLASLH 339
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
G+ +H + I L +++V +++IDMY KCG +D AR FN M +NV SW AMI G
Sbjct: 340 HGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCA 399
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+ ++AL+LF M++ +P+ +TF+ +LSAC H +++G + +++ ++ + P +
Sbjct: 400 QNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTL 459
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
+HY CMV+LLGR G++++A LI+ M DF++W +LL C ++ E+AA+ LFE
Sbjct: 460 DHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFE 519
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
L+P +++LSN+YA+ GRW+DV R+LMK++ + K GFS +E+ +VH F D+
Sbjct: 520 LDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDR 579
Query: 548 EHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------- 599
HP+ E IYE L L KLQE G+ + V+HDV ++EK ++ HSEKLA
Sbjct: 580 THPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKK 639
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
N+R+C DCH ++ S+++ R+I++RDS RFH+F G CSC D W
Sbjct: 640 PNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 138/522 (26%), Positives = 237/522 (45%), Gaps = 110/522 (21%)
Query: 70 TPTRSTFPCAIKSCSALHDLHSGK--QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
T T + + C ++++ K Q+H + +F D F+ + L+ +Y+K G+L DA
Sbjct: 19 TATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQ-PTDSFLHNQLLHLYAKFGKLRDA 77
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGY-----VQNDNAREALLLFKEFLLEESECGGASENS- 181
+ LFD++ + R+I SW ++L+ Y +QN A + F++ + + G S NS
Sbjct: 78 QNLFDKMLK--RDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSC 135
Query: 182 -------------DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
+ I S+L+A ++++ + HG +I R F V + N
Sbjct: 136 PQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNA 195
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
L D YA+ G ++ +R +FD + +K+ V+WN +I+ YA+NG + + + QM
Sbjct: 196 LTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQM-------- 247
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
RL + DQV ++II YC+CG+VD AR+ F
Sbjct: 248 ------------------RLSGHMPDQVTM----------STIIAAYCQCGRVDEARRVF 279
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----H 403
++ KEK++ WTAM+ GY + R +AL LF +M+ + P+ T SV+S+C+ H
Sbjct: 280 SEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLH 339
Query: 404 AGLVQEGWHWLNTMGHE-----------------------FNIEP--GVEHYGCMVDLLG 438
G G L + + FN+ P V + M+
Sbjct: 340 HGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCA 399
Query: 439 RAGKLKEAYDLIEGM---KVKADFVVWGSLLGACRIHKN-VDLGEIAAKKLFELEPNNCG 494
+ G K+A +L E M K K D V + +L AC +H N ++ G+ + F+ N G
Sbjct: 400 QNGHDKDALELFENMLQQKFKPDNVTFIGILSAC-LHCNWIEQGQ----EYFDSITNQHG 454
Query: 495 ------YHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
++ + N+ GR +E+ +L+KN +A P F
Sbjct: 455 MTPTLDHYACMVNLLGRTGR---IEQAVALIKN--MAHDPDF 491
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/575 (39%), Positives = 324/575 (56%), Gaps = 34/575 (5%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L G Q H Q GF V LI+ YSK + KLFD P + + +W+S++
Sbjct: 23 LRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHK--SATTWSSVI 80
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
+ + QND AL F+ L + D + + + + ++ +
Sbjct: 81 SSFAQNDLPLPALRFFRRML------------RHGLLPDDHTLPTAAKSVAALSSLPLAL 128
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H +K +V VG++L+D YA+ G V+++RKVFD M K+ V+W+ +I Y+Q G
Sbjct: 129 SLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMG 188
Query: 269 LAAEALDVFDQMV-KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
L EAL++F + + + D++ N TLS+VL + + LGK +H K + S V
Sbjct: 189 LDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFV 248
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+S+I +Y KCG V+ K F ++K +N+ W AM+ H +LF +M + GV
Sbjct: 249 ASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGV 308
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+PN+ITF+ +L ACSHAGLV++G H M E IEPG +HY +VDLLGRAGKL+EA
Sbjct: 309 KPNFITFLCLLYACSHAGLVEKGEHCFGLM-KEHGIEPGSQHYATLVDLLGRAGKLEEAV 367
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+I+ M ++ VWG+LL CRIH N +L A K+FE+ + G VLLSN YA AG
Sbjct: 368 LVIKEMPMQPTESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAG 427
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RWE+ R R +M+++ + K G S VE +VH F GD+ H + +IYE LEEL ++
Sbjct: 428 RWEEAARARKMMRDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMA 487
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
+ GYV D + V+ +VD +EK T+R HSE+LA NLRVCGDCHT
Sbjct: 488 KAGYVADTSFVLKEVDGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHT 547
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+ ISK R I+VRD+ RFH F+DG C+CGDYW
Sbjct: 548 AIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 582
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 181/354 (51%), Gaps = 19/354 (5%)
Query: 21 TNTNLT----TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTF 76
+ TNL LF+ + K+ +W+SVI+ A+ + ALR F M + L P T
Sbjct: 53 SKTNLPHSSLKLFDSFPHKSAT-TWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTL 111
Query: 77 PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
P A KS +AL L H + H DVFV S+L+D Y+KCG+++ ARK+FDE+P
Sbjct: 112 PTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPH 171
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
+N+VSW+ M+ GY Q EAL LFK L E ++ V+ ++SVL
Sbjct: 172 --KNVVSWSGMIYGYSQMGLDEEALNLFKRAL----------EQDYDIRVNDFTLSSVLR 219
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
CS T+ + + HG K FDS V ++LI Y++ G V+ KVF+ + ++
Sbjct: 220 VCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEVKVRNLGM 279
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
WN+++ AQ+ ++F++M + VK N +T +L A +H G++ G+ +
Sbjct: 280 WNAMLIACAQHAHTGRTFELFEEM-ERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLM 338
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
+ +E +++D+ + G+++ A +M + S W A++ G +H
Sbjct: 339 KEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIH 392
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
VL+ H LR G +H QVIK+ E +V +I+ Y K + K F+ K+
Sbjct: 13 VLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKS 72
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+W+++I+ + + AL F +M++ G+ P+
Sbjct: 73 ATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPD 107
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/583 (38%), Positives = 340/583 (58%), Gaps = 40/583 (6%)
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
SA L +QAH + G HR + + L+ + G ++ R+LF + +
Sbjct: 18 SAGPHLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDP--DSFL 75
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
+ S++ + + +A+L ++ LL + + SV+ AC+ +++
Sbjct: 76 FNSLIKASSKFGFSLDAVLFYRRMLLSR------------IVPSTYTFTSVIKACADLSL 123
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ H V G+ S+ V LI YA+ V+RKVFD M ++ V WNS+I+
Sbjct: 124 LCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISG 183
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y QNGLA EA++VF++M + + V+ ++ T +VL A + LG L G +HD ++ +
Sbjct: 184 YEQNGLANEAVEVFNKM-RESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITM 242
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+V++ TS+++M+ +CG V AR F M E NV WTAMI+GYGMH EA+++F++M
Sbjct: 243 NVVLATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMK 302
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
GV PN +TFV+VLSAC+HAGL+ EG +M E+ + PGVEH+ CMVD+ GR G L
Sbjct: 303 ARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLL 362
Query: 444 KEAYDLIEGMK----VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
EAY ++G+ V A VW ++LGAC++HKN DLG A+ L EP N G++VLL
Sbjct: 363 NEAYQFVKGLNSDELVPA---VWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLL 419
Query: 500 SNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYL 559
SN+YA AGR + VE R++M R L K G+S +++ + + F +GDK HP+ +IY +L
Sbjct: 420 SNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCFL 479
Query: 560 EELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NL 601
+EL + ++ GY S +H+++ EE+E LR HSEKLA NL
Sbjct: 480 DELIWRCKDAGYAPVPESAMHELEGEEREYALRYHSEKLAVAFGLMKTGDGVTLRIVKNL 539
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
R+C DCH+ I+ IS V++REI+VRD RFH+F++G CSC DYW
Sbjct: 540 RICEDCHSAIKFISAVMNREIIVRDKLRFHHFREGSCSCSDYW 582
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 179/348 (51%), Gaps = 25/348 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF D ++ F +NS+I ++ G S++A+ + M + P+ TF IK+C+ L
Sbjct: 64 LFRSVSDPDS-FLFNSLIKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLS 122
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G H F+ G+ D FV +ALI Y+K ARK+FDE+PQ R+IV+W SM
Sbjct: 123 LLCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQ--RSIVAWNSM 180
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY QN A EA+ +F + + ES V DS SVLSACS++
Sbjct: 181 ISGYEQNGLANEAVEVFNK--MRESR----------VEPDSATFVSVLSACSQLGSLDFG 228
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H ++ G V + +L++ ++R G V +R VF MIE + V W ++I+ Y +
Sbjct: 229 CWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMH 288
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EA++VF +M K+ V N+VT AVL A AH G++ G+ + M E V+
Sbjct: 289 GYGVEAMEVFHRM-KARGVVPNSVTFVAVLSACAHAGLIDEGRSV---FASMKQEYGVVP 344
Query: 328 GTS----IIDMYCKCGQVDLARKAFNQMKEKNVRS--WTAMIAGYGMH 369
G ++DM+ + G ++ A + + + WTAM+ MH
Sbjct: 345 GVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLGACKMH 392
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/586 (39%), Positives = 341/586 (58%), Gaps = 50/586 (8%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
T+P IK+C+ G H GF D ++ ++LI +Y+ +L A++LF
Sbjct: 2 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLC 61
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
R ++VSW +M+ GYV+ ++F + + S N ++ AI
Sbjct: 62 SDR--DVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDV-------ISWNTIINGYAI--- 109
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDS----EVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
V + E KR FD + N+++ + + G+V+ + +F M
Sbjct: 110 --------VGKIDEA------KRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMP 155
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+D V+WNS++A YAQ G EAL +FDQM ++ VK T+ ++L A AHLG L G
Sbjct: 156 CRDVVSWNSMLACYAQCGKPNEALALFDQM-RAVGVKPTEATVVSLLSACAHLGALDKGL 214
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
+H + +E + IVGT+++DMY KCG++ LA + FN M+ K+V +W +IAG +H
Sbjct: 215 HLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHG 274
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
+EA LF +M +A V PN ITFV++LSACSHAG+V EG L+ M + IEP VEHY
Sbjct: 275 HVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHY 334
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
C++DLL RAG L+EA +LI M ++ + G+LLG CRIH N +LGE+ K+L L+P
Sbjct: 335 DCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQP 394
Query: 491 NNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHP 550
+ G ++LLSNIYA A +W+D + R+LMK ++K PG S++EL+G VH F+ GD HP
Sbjct: 395 CHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHP 454
Query: 551 QHEKIYEYLEELNVKLQE-VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
+ KIY+ L E++ +L+ +GY D +V+ D+++E+KE L +HSEKLA
Sbjct: 455 ESNKIYDKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDS 514
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGL 637
NLRVC DCH V +LISKV REI+VRD RFH+F+DG
Sbjct: 515 KEAIRIVKNLRVCRDCHHVTKLISKVYGREIIVRDRNRFHHFEDGF 560
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 146/323 (45%), Gaps = 63/323 (19%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SWNS++A A+ G EAL F MR + + PT +T + +C+ L L G H
Sbjct: 158 DVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLH 217
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+ V +AL+DMY+KCG++S A ++F+ + +++++W +++ G + +
Sbjct: 218 TYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMES--KDVLAWNTIIAGMAIHGH 275
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+EA LFKE ++E+ + E +D FV ++LSACS
Sbjct: 276 VKEAQQLFKE--MKEA----SVEPNDITFV------AMLSACS----------------- 306
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-----IEKDAVTWNSIIAIYAQNGLAA 271
G VD +K+ D M IE ++ +I + A+ GL
Sbjct: 307 ------------------HAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLE 348
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA+++ M ++ N L A+L G LG+ + ++I + S G I
Sbjct: 349 EAMELIGTM----PMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHS---GRYI 401
Query: 332 I--DMYCKCGQVDLARKAFNQMK 352
+ ++Y + D ARK N MK
Sbjct: 402 LLSNIYAAAKKWDDARKVRNLMK 424
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
T +FN ++ +V +WN++IA +A G EA + F M++ S+ P TF + +CS
Sbjct: 249 TQVFNA-MESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACS- 306
Query: 86 LHDLHSGKQAHQQAFI------FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
H+G Q + +G V +ID+ ++ G L +A +L +P
Sbjct: 307 ----HAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMP 358
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 11/179 (6%)
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
+T V+ A V G +H V+K E + S+I +Y + A++ F+
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
+++V SW AMI GY +F +M+ V I++ ++++ + G + E
Sbjct: 61 CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDV----ISWNTIINGYAIVGKIDEA 116
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
+ M E + + M+ + G ++EA+ L M + D V W S+L AC
Sbjct: 117 KRLFDEMP-----ERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCR-DVVSWNSML-AC 168
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/632 (35%), Positives = 355/632 (56%), Gaps = 73/632 (11%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL--SLTPTRSTFPCAIKSCSA 85
+FN ++ N+F++N+++ ++ + F++ L + P TF +K+C+
Sbjct: 80 IFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAG 139
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L + G++ H +G ++FV ++L+D+Y K G A+KLFDE+ +R++VSW
Sbjct: 140 LAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMV--VRDVVSW- 196
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
N + + ++ +R+ +G
Sbjct: 197 -------------------------------------NTLISGYCFSGMVDK-ARMVFDG 218
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ E + +T+I YAR G+++ +R++F+ M ++ V+WN++IA YA
Sbjct: 219 MME------------KNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYA 266
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QN A+A+++F QM + N VTL +VL A AHLG L LGK IH + + +E +
Sbjct: 267 QNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGL 326
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+G ++ DMY KCG V A+ F++M E++V SW+ +I G M+ A EA + F +MI+
Sbjct: 327 FLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIED 386
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ PN I+F+ +L+AC+HAGLV +G + + M + I P +EHYGC+VDLL RAG+L +
Sbjct: 387 GLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQ 446
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A LI M ++ + +VWG+LLG CRI+K+ + GE ++ EL+ N+ G V L+N+YA+
Sbjct: 447 AESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYAS 506
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
GR +D R M++ + KTPG S +E+ V+ F +GD HPQ +IY + EL K
Sbjct: 507 MGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWK 566
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++ GY VIH++D+EEKE L HSEKLA NLRVC DC
Sbjct: 567 MKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDC 626
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
H I++ISK+V+REIVVRD RFH+FKDG CS
Sbjct: 627 HDAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/652 (35%), Positives = 355/652 (54%), Gaps = 58/652 (8%)
Query: 41 WNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
W I+ AR G + +RAF+ M + TP ++ C+ + D+ SGK+ H
Sbjct: 79 WTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWM 138
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G H DV + +A++DMY+KCG+ AR++F + + R+ VSW + +Q+ +
Sbjct: 139 LRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAE--RDAVSWNIAIGACIQSGDILG 196
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVA----IASVLSACSRVTVNGVT-------- 207
++ LF E L ++ S N + + A LS R+ GV
Sbjct: 197 SMQLFDESPLRDT-------TSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYST 249
Query: 208 --------------EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD--GMIE 251
HG V+ + + V ++L+D Y + G ++ + VFD +
Sbjct: 250 AFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLT 309
Query: 252 KDA-VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+D W++++A Y QNG EALD+F +M++ V + TL++V A A++G++ G+
Sbjct: 310 RDMNFAWSTMVAGYVQNGREEEALDLFRRMLRE-GVAADRFTLTSVAAACANVGMVEQGR 368
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
+H V K+ + + ++I+DMY KCG ++ AR F++ KN+ WT+M+ Y H
Sbjct: 369 QVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHG 428
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
+ R A++LF +M + PN IT V VLSACSH GLV EG + M E+ I P +EHY
Sbjct: 429 QGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHY 488
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
C+VDL GR+G L +A + IE + + +VW +LL ACR+H++ + ++A++KL +LE
Sbjct: 489 NCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQ 548
Query: 491 NNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHP 550
+ G +V+LSNIYA +W D R M+ R++ K PG S + L+ VH F+ GD HP
Sbjct: 549 CDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHP 608
Query: 551 QHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------- 599
Q +IY YLE+L +L+E+GY + V+HDV+ E++E L+ HSEKLA
Sbjct: 609 QSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSG 668
Query: 600 -------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH I+ IS REIVVRD RFH+FKD CSC D+W
Sbjct: 669 TPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 166/340 (48%), Gaps = 30/340 (8%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SWN++I+ L R G + +AL M + + T+ A L G+Q H +
Sbjct: 211 SWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRV 270
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI-VSWTSMLTGYVQNDNAR 158
I D FV S+L+DMY KCG L A +FD R++ +W++M+ GYVQN
Sbjct: 271 LIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREE 330
Query: 159 EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG 218
EAL LF+ L E V D + SV +AC+ V + HG V K
Sbjct: 331 EALDLFRRMLRE------------GVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLW 378
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
+ + + + ++D YA+ G+++ +R +FD K+ W S++ YA +G A+++F+
Sbjct: 379 YKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFE 438
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT-----SIID 333
+M + + N +TL VL A +H+G++ G+ Q+ EE IV + I+D
Sbjct: 439 RMT-AEKMTPNEITLVGVLSACSHVGLVSEGELYFKQM----QEEYGIVPSIEHYNCIVD 493
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRS----WTAMIAGYGMH 369
+Y + G +D KA N ++E N+ W +++ +H
Sbjct: 494 LYGRSGLLD---KAKNFIEENNINHEAIVWKTLLSACRLH 530
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 26/231 (11%)
Query: 39 FSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQ 98
F+W++++A + G EAL F M + + R T +C+ + + G+Q H
Sbjct: 314 FAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGC 373
Query: 99 AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR 158
+ D ++SA++DMY+KCG L DAR +FD +NI WTSML Y + R
Sbjct: 374 VEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRAC--TKNIAVWTSMLCSYASHGQGR 431
Query: 159 EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG 218
A+ LF+ ++ + + + + VLSACS V + V+EG F +
Sbjct: 432 IAIELFERM------------TAEKMTPNEITLVGVLSACSHVGL--VSEGELYF---KQ 474
Query: 219 FDSEVGV------GNTLIDAYARGGHVDVSRK-VFDGMIEKDAVTWNSIIA 262
E G+ N ++D Y R G +D ++ + + I +A+ W ++++
Sbjct: 475 MQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLS 525
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R VFD + A W I+ A+ G A+ + F +M+ + NA L+AV+ A
Sbjct: 64 ARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCA 123
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+G + GK +H +++ + V++ +++DMY KCGQ + AR+ F M E++ SW
Sbjct: 124 GMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNI 183
Query: 362 MIAG 365
I
Sbjct: 184 AIGA 187
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-VR 388
S++ + + + AR F++ + WT I+G R + + F +M+ G
Sbjct: 50 SVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEAT 109
Query: 389 PNYITFVSVLSACSHAGLVQEGWH---WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
PN +V+ C+ G V+ G W+ G + V ++D+ + G+ +
Sbjct: 110 PNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNG----VHLDVVLCNAVLDMYAKCGQFER 165
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI-AAKKLFELEP 490
A + M + D V W +GAC + G+I + +LF+ P
Sbjct: 166 ARRVFGAMAER-DAVSWNIAIGAC-----IQSGDILGSMQLFDESP 205
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 19/173 (10%)
Query: 16 VDKHSTNTNLT---TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPT 72
VD ++ NL ++F++ KN + W S++ A G A+ F M +TP
Sbjct: 390 VDMYAKCGNLEDARSIFDRACTKN-IAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPN 448
Query: 73 RSTFPCAIKSCSALHDLHSG----KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
T + +CS + + G KQ ++ +G + + ++D+Y + G L A+
Sbjct: 449 EITLVGVLSACSHVGLVSEGELYFKQMQEE---YGIVPSIEHYNCIVDLYGRSGLLDKAK 505
Query: 129 KLFDEIPQRIRNIVSWTSMLTG---YVQNDNAREALLLFKEFLLEESECGGAS 178
+E IV W ++L+ + N+ A+ L E L++ +C S
Sbjct: 506 NFIEENNINHEAIV-WKTLLSACRLHQHNEYAK----LASEKLVQLEQCDAGS 553
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/621 (37%), Positives = 339/621 (54%), Gaps = 71/621 (11%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
I+ + L K H G D ++ + ++ G + + ++F + +
Sbjct: 14 IRLFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEP-- 71
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
NI + +M+ G V ND+ +E++ ++ S + + DS +L AC+
Sbjct: 72 NIFLFNTMIHGLVLNDSFQESIEIYH------------SMRKEGLSPDSFTFPFLLKACA 119
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD------------ 247
R+ + + HG V+K G +S+ V +L+ Y + G +D + KVFD
Sbjct: 120 RLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTA 179
Query: 248 --------------------------GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
GM+EKD V+W+S+I YA NGL EALD+F +M+
Sbjct: 180 IISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKML 239
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ + + + VL A A LG L LG + + + + + ++GT++IDMY KCG++
Sbjct: 240 -NEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRM 298
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
D A + F M++K++ W A I+G M + A LF +M K+G+ P+ TFV +L AC
Sbjct: 299 DSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCAC 358
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+HAGLV EG + N+M F + P +EHYGCMVDLLGRAG L EA+ L++ M ++A+ +V
Sbjct: 359 THAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIV 418
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKN 521
WG+LLG CR+H++ L E K+L LEP+N G +VLLSNIY+ + +WED + RS+M
Sbjct: 419 WGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSE 478
Query: 522 RRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHD 581
R + K PG+S +E+ G VH FLVGD HP EKIY L EL L+ GYV V+ D
Sbjct: 479 RGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFD 538
Query: 582 VDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIV 623
+++EEKE + HSEKLA NLRVCGDCH I+ IS+ REI+
Sbjct: 539 IEEEEKEHFIGCHSEKLAIAFGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREII 598
Query: 624 VRDSKRFHYFKDGLCSCGDYW 644
VRD+ RFH F DG CSC DYW
Sbjct: 599 VRDNNRFHCFNDGSCSCKDYW 619
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 198/411 (48%), Gaps = 37/411 (9%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
NTN + + N+F +N++I L E++ + SMRK L+P TFP +K
Sbjct: 57 NTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLK 116
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI 141
+C+ L D G + H G D FV+++L+ +Y KCG + +A K+FD+IP+ +N+
Sbjct: 117 ACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPE--KNV 174
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEF-----------------LLEESECGGASENSDNV 184
+WT++++GY+ REA+ +F+ +++ G + + ++
Sbjct: 175 AAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDL 234
Query: 185 FV---------DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
F D A+ VL AC+R+ + A + + F +G LID YA+
Sbjct: 235 FFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAK 294
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
G +D + +VF GM +KD V WN+ I+ A +G A +F QM KS ++ + T
Sbjct: 295 CGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKS-GIEPDGNTFVG 353
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-E 353
+L A H G++ G+ + + ++ L + ++D+ + G +D A + M E
Sbjct: 354 LLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPME 413
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP----NYITFVSVLSA 400
N W A++ G +H R + ++ K + A + P NY+ ++ SA
Sbjct: 414 ANAIVWGALLGGCRLH-RDTQLVEGVLKQLIA-LEPSNSGNYVLLSNIYSA 462
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/633 (37%), Positives = 343/633 (54%), Gaps = 56/633 (8%)
Query: 39 FSWNSVIAD-----LARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
SW SV+ L L A +++ LSL +K C ++ + K
Sbjct: 1 MSWTSVLCQSHFLSLPNNPPQSSELNAKFNVQGLSL----------LKRCKSMEEF---K 47
Query: 94 QAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
Q H G D F S L+ S+ G + A +F +I + + +M+ G
Sbjct: 48 QVHAHILKLGLFYDSFCGSNLVATCALSRWGSMEYACSIFRQIEEP--GSFEYNTMIRGN 105
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA- 210
V + N EALLL+ E L + D+ VL ACS + + EG
Sbjct: 106 VNSMNLEEALLLYVEML------------ERGIEPDNFTYPFVLKACS--LLGALKEGVQ 151
Query: 211 -HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
H V K G + +V V N LI+ Y + G ++ + VF+ M EK +W+SII +A +
Sbjct: 152 IHAHVFKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVEM 211
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
E L + M + L + L A HLG G+CIH +++ E +V V T
Sbjct: 212 WHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVKT 271
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
S+IDMY K G ++ F M +KN S+T +I G +H R REAL +F M++ G+ P
Sbjct: 272 SLIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAP 331
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ + +V VLSACSHAGLV EG N + E I+P ++HYGCMVDL+GRAG LK AYDL
Sbjct: 332 DDVVYVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDL 391
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I+ M +K + VVW SLL AC++H N+++GEIAA+ +F+L +N G +++L+N+YA A +W
Sbjct: 392 IKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFKLNQHNPGDYLVLANMYARAKKW 451
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
DV R R+ M + L +TPGFSLVE V+ F+ DK PQ E IY+ ++++ +L+
Sbjct: 452 ADVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFE 511
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GY DM+ V+ DVD++EK L+ HS+KLA N+R+C DCHT
Sbjct: 512 GYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSRIRISRNIRMCNDCHTYT 571
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ IS + +REI VRD RFH+FKDG CSC DYW
Sbjct: 572 KFISVIYEREITVRDRNRFHHFKDGTCSCKDYW 604
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 160/341 (46%), Gaps = 16/341 (4%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ +++ F +N++I + EAL + M + + P T+P +K+CS L L
Sbjct: 88 RQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALK 147
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G Q H F G DVFV + LI+MY KCG + A +F+++ + +++ SW+S++
Sbjct: 148 EGVQIHAHVFKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDE--KSVASWSSIIGA 205
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
+ + E L+L + E G +++ V S LSAC+ +
Sbjct: 206 HASVEMWHECLMLLGDMSGE-----GRHRAEESILV------SALSACTHLGSPNFGRCI 254
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG +++ + V V +LID Y + G ++ VF M +K+ ++ II A +G
Sbjct: 255 HGILLRNISELNVAVKTSLIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRG 314
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGT 329
EAL VF M++ + + V VL A +H G++ G +C + + ++ ++
Sbjct: 315 REALSVFSDMLEE-GLAPDDVVYVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYG 373
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMH 369
++D+ + G + A M K N W ++++ +H
Sbjct: 374 CMVDLMGRAGMLKGAYDLIKSMPIKPNDVVWRSLLSACKVH 414
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/633 (36%), Positives = 360/633 (56%), Gaps = 37/633 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K +++ + SWN++I+ G +E LR F M K + P T I +C L
Sbjct: 264 VFDKMPNRDRI-SWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLG 322
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G+Q H F RD + ++LI MYS G + +A +F R++VSWT+M
Sbjct: 323 DDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSR--TECRDLVSWTAM 380
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY ++AL +K ++E ++ + D + IA VLSACS + +
Sbjct: 381 ISGYENCLMPQKALETYK--MME----------AEGIMPDEITIAIVLSACSCLCNLDMG 428
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H ++G S V N+LID YA+ +D + ++F +EK+ V+W SII N
Sbjct: 429 MNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRIN 488
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
EAL F +M++ +K N+VTL VL A A +G L GK IH ++ + +
Sbjct: 489 NRCFEALFFFREMIRR--LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFM 546
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+I+DMY +CG+++ A K F + + V SW ++ GY + A +LF +M+++ V
Sbjct: 547 PNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNV 605
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
PN +TF+S+L ACS +G+V EG + N+M ++++I P ++HY C+VDLLGR+GKL+EAY
Sbjct: 606 SPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAY 665
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ I+ M +K D VWG+LL +CRIH +V+LGE+AA+ +F+ + + GY++LLSN+YA+ G
Sbjct: 666 EFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNG 725
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+W+ V R +M+ L PG S VE++G VHAFL D HPQ ++I LE K++
Sbjct: 726 KWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMK 785
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E G V S D+ + K HSE+LA NL +C CH
Sbjct: 786 EAG-VEGPESSHMDIMEASKADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMCQSCHN 844
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
+++ IS+ V REI VRD+++FH+FK G+CSC D
Sbjct: 845 IVKFISREVRREISVRDAEQFHHFKGGICSCTD 877
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/438 (31%), Positives = 231/438 (52%), Gaps = 27/438 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
++K N+FSWN ++ A+ G EAL + M + + P TFPC +++C + +L G
Sbjct: 167 MEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRG 226
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ H +GF DV V +ALI MY KCG+++ AR +FD++P R R +SW +M++GY
Sbjct: 227 REIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDR--ISWNAMISGYF 284
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+N E L LF + V D + + SV++AC + + + HG
Sbjct: 285 ENGVCLEGLRLFGMMI------------KYPVDPDLMTMTSVITACELLGDDRLGRQIHG 332
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+V++ F + + N+LI Y+ G ++ + VF +D V+W ++I+ Y + +
Sbjct: 333 YVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQK 392
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL+ + +M+++ + + +T++ VL A + L L +G +H+ + L IV S+I
Sbjct: 393 ALETY-KMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLI 451
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KC +D A + F+ EKN+ SWT++I G ++ R EAL F +MI+ ++PN +
Sbjct: 452 DMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNSV 510
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM----VDLLGRAGKLKEAYD 448
T V VLSAC+ G + G H + GV G M +D+ R G+++ A+
Sbjct: 511 TLVCVLSACARIGALTCG-----KEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWK 565
Query: 449 LIEGMKVKADFVVWGSLL 466
+ V + W LL
Sbjct: 566 --QFFSVDHEVTSWNILL 581
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 126/243 (51%), Gaps = 5/243 (2%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+GN L+ + R G++ + VF M +++ +WN ++ YA+ GL EALD++ +M+
Sbjct: 143 LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRML-WV 201
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
VK + T VL + L G+ IH VI+ E V V ++I MY KCG V+ A
Sbjct: 202 GVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTA 261
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R F++M ++ SW AMI+GY + E L LF MIK V P+ +T SV++AC
Sbjct: 262 RLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELL 321
Query: 405 GLVQEGWHWLN-TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWG 463
G + G + EF +P + + ++ + G ++EA + + + D V W
Sbjct: 322 GDDRLGRQIHGYVLRTEFGRDPSI--HNSLIPMYSSVGLIEEAETVFSRTECR-DLVSWT 378
Query: 464 SLL 466
+++
Sbjct: 379 AMI 381
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
S+ +G +++ M+ + G + A F +M+++N+ SW ++ GY EALDL+++M+
Sbjct: 140 SLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRML 199
Query: 384 KAGVRPNYITFVSVLSAC 401
GV+P+ TF VL C
Sbjct: 200 WVGVKPDVYTFPCVLRTC 217
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 251/665 (37%), Positives = 373/665 (56%), Gaps = 47/665 (7%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S +++++ KHS +F++ + + ++ S+N++IA A G+ ALR F+ +R+L
Sbjct: 77 SYNTLINAYAKHSLIHLARQVFDE-IPQPDIVSYNTLIAAYADRGECRPALRLFAEVREL 135
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
T I +C D+ +Q H + G+ V++A++ YS+ G L++A
Sbjct: 136 RFGLDGFTLSGVIIACG--DDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEA 193
Query: 128 RKLFDEIPQRI-RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
R++F E+ + R+ VSW +M+ Q+ EA+ LF+E + + V
Sbjct: 194 RRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMV------------RRGLKV 241
Query: 187 DSVAIASVLSA--CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR--GGHVDVS 242
D +ASVL+A C + V G+ HG +IK GF VG+ LID Y++ GG V+
Sbjct: 242 DMFTMASVLTAFTCVKDLVGGMQ--FHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVEC- 298
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQ-NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
RKVF+ + D V WN++I+ ++Q L+ + + F +M + + + V A +
Sbjct: 299 RKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREM-QHNGFHPDDCSFVCVTSACS 357
Query: 302 HLGVLRLGKCIHDQVIKMDLE-ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
+L +GK +H IK D+ V V +++ MY KCG V AR+ F+ M E N+ S
Sbjct: 358 NLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLN 417
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
+MIAGY H E+L LF M++ + PN ITF++VLSAC H G V+EG + N M
Sbjct: 418 SMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKER 477
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
F IEP EHY CM+DLLGRAGKLKEA +IE M + W +LLGACR H NV+L
Sbjct: 478 FRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVK 537
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
AA + +LEP N +V+LSN+YA+A RWE+ + LM+ R + K PG S +E+ KVH
Sbjct: 538 AANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVH 597
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVI---HDVDQEEKEMTLRIHSEK 597
F+ D HP ++I+ Y+ E+ K+++ GYV D+ + +V+ +EKE L HSEK
Sbjct: 598 VFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEK 657
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA NLR+CGDCH I+LIS + REI VRD+ RFH FK+G CS
Sbjct: 658 LAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCS 717
Query: 640 CGDYW 644
CGDYW
Sbjct: 718 CGDYW 722
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 220/496 (44%), Gaps = 75/496 (15%)
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD------- 126
TF +K+C A DL +GK H F ++S+ +YSKCG L +
Sbjct: 10 QTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDL 69
Query: 127 ------------------------ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
AR++FDEIPQ +IVS+ +++ Y R AL
Sbjct: 70 TQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQ--PDIVSYNTLIAAYADRGECRPALR 127
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE 222
LF E + E G +D ++ V+ AC G+ H FV+ G+D
Sbjct: 128 LFAE--VRELRFG----------LDGFTLSGVIIACGDDV--GLVRQLHCFVVVCGYDCY 173
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIE---KDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
V N ++ Y+R G ++ +R+VF M E +D V+WN++I Q+ EA+++F +
Sbjct: 174 ASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFRE 233
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC- 338
MV+ +K + T+++VL A + L G H +IK + VG+ +ID+Y KC
Sbjct: 234 MVRR-GLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCA 292
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE-ALDLFYKMIKAGVRPNYITFVSV 397
G + RK F ++ ++ W MI+G+ + E + F +M G P+ +FV V
Sbjct: 293 GGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCV 352
Query: 398 LSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH-----YGCMVDLLGRAGKLKEAYDLIEG 452
SACS+ G H I+ + + +V + + G + +A + +
Sbjct: 353 TSACSNLSSPSVG-----KQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDT 407
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL------EPNNCGYHVLLSNIYANA 506
M + + V S++ H E+ + +LFEL PN + +LS +
Sbjct: 408 MP-EHNMVSLNSMIAGYAQHGV----EVESLRLFELMLQKDIAPNTITFIAVLSAC-VHT 461
Query: 507 GRWEDVERTRSLMKNR 522
G+ E+ ++ ++MK R
Sbjct: 462 GKVEEGQKYFNMMKER 477
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/674 (35%), Positives = 368/674 (54%), Gaps = 84/674 (12%)
Query: 2 KLSKSSSVSSVVSNVDKHSTNT------------NLTTLFNKYVDKNNVFSWNSVIADLA 49
KLS + +V ++ D +S NT NL +F++ +++V S+N++IA A
Sbjct: 73 KLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSV-SYNTLIACFA 131
Query: 50 RGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVF 109
G S +AL+ M++ PT+ + A+++CS L DL GKQ H + + + F
Sbjct: 132 SNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTF 191
Query: 110 VSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLL 169
V +A+ DMY+KCG++ AR LFD + + N+VSW M++GYV+ N E + LF E L
Sbjct: 192 VRNAMTDMYAKCGDIDKARLLFDGMIDK--NVVSWNLMISGYVKMGNPNECIHLFNEMQL 249
Query: 170 EESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTL 229
G ++ + +
Sbjct: 250 S-----------------------------------------------GLKPDLVTVSNV 262
Query: 230 IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCN 289
++AY R G VD +R +F + +KD + W ++I YAQNG +A +F M++ +VK +
Sbjct: 263 LNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRR-NVKPD 321
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
+ T+S+++ + A L L G+ +H +V+ M ++ S++V ++++DMYCKCG AR F
Sbjct: 322 SYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFE 381
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
M +NV +W AMI GY + + EAL L+ +M + +P+ ITFV VLSAC +A +V+E
Sbjct: 382 TMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKE 441
Query: 410 GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G + +++ E I P ++HY CM+ LLGR+G + +A DLI+GM + ++ +W +LL C
Sbjct: 442 GQKYFDSIS-EHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVC 500
Query: 470 RIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPG 529
++ E+AA LFEL+P N G +++LSN+YA GRW+DV RSLMK + K
Sbjct: 501 -AKGDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAA 559
Query: 530 FSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEM 589
+S VE+ KVH F+ D HP+ KIY L L LQ++GY D V+H+V +EEK
Sbjct: 560 YSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDTNIVLHNVGEEEKFR 619
Query: 590 TLRIHSEKLA-------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRF 630
++ HSEKLA N+RVC DCH ++ S + R I++RDS RF
Sbjct: 620 SISYHSEKLALAFALIRKPNGVAPIRIIKNIRVCDDCHVFMKFASITISRPIIMRDSNRF 679
Query: 631 HYFKDGLCSCGDYW 644
H+F G CSC D W
Sbjct: 680 HHFFGGKCSCNDNW 693
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 190/409 (46%), Gaps = 70/409 (17%)
Query: 83 CSALHDLHSGK--QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
C+ +D K Q+H + +F +D F+ + L+ +Y+K G+LSDA+ +FD + + R+
Sbjct: 32 CARANDFIQAKRLQSHMELNLFQ-PKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTK--RD 88
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEES-------ECGGASENS------------ 181
+ SW ++L+ Y + ++F + +S C ++ +S
Sbjct: 89 VYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQE 148
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
D + + L ACS++ + HG ++ V N + D YA+ G +D
Sbjct: 149 DGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDK 208
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R +FDGMI+K+ V+WN +I+ Y + G E + +F++M + + +K + VT+S VL A
Sbjct: 209 ARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEM-QLSGLKPDLVTVSNVLNA-- 265
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
Y +CG+VD AR F ++ +K+ WT
Sbjct: 266 ---------------------------------YFRCGRVDDARNLFIKLPKKDEICWTT 292
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MI GY + R +A LF M++ V+P+ T S++S+C+ + G + H
Sbjct: 293 MIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHG-----QVVHGK 347
Query: 422 NIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ G+++ +VD+ + G +A + E M ++ + + W +++
Sbjct: 348 VVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIR-NVITWNAMI 395
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/557 (40%), Positives = 309/557 (55%), Gaps = 39/557 (7%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
D + L+ + G++ AR LF +P RN+ SW +ML+G ++ EA +F
Sbjct: 81 DAVSYNTLLSCHFAAGDVRGARDLFAAMPATARNVTSWNTMLSGLSRSGAVGEARAVFLA 140
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGV- 225
S S N V A A + A + D E V
Sbjct: 141 MPARNS-------ISWNAMVSCFAHAGDMCAAEEC-------------FEDAPDKENAVL 180
Query: 226 GNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD 285
++ Y GHV+ + + F+ M + V+WN+++A Y +N A +AL VF MV+ D
Sbjct: 181 WTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDAD 240
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
V+ N TLS+VLL ++L L G+ +H K+ L V GTS++ MYCKCG +D A
Sbjct: 241 VRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGAC 300
Query: 346 KAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
K F++M+ ++V +W AMI+GY H REA++LF KM GV PN+ITFV+VL+AC H G
Sbjct: 301 KLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIHTG 360
Query: 406 LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
+ G M + IE V+HY CMVDLL RAG L+ A LI M + +G+L
Sbjct: 361 MCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLERAVSLIRSMPFQPHPSAYGTL 420
Query: 466 LGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLA 525
L A R++KN++ E AA KL E P N G +V L+NIYA A +W DV R R MK+ +
Sbjct: 421 LNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYAVANQWADVSRVRRWMKDNAVV 480
Query: 526 KTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQE 585
KTPG+S VE+ G +H F D+ HPQ I+E L +L +++ +GYV D+ +HDVD+
Sbjct: 481 KTPGYSWVEINGVIHVFRSNDRLHPQLSLIHERLCQLEERMKAMGYVPDLDFALHDVDES 540
Query: 586 EKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDS 627
K L HSEKLA NLRVCGDCHT +LISK+ DREI++RD+
Sbjct: 541 LKVQMLMRHSEKLAIAFGLLSTAPGITLRIFKNLRVCGDCHTAAKLISKIEDREIILRDT 600
Query: 628 KRFHYFKDGLCSCGDYW 644
RFH+F+ G CSCGDYW
Sbjct: 601 TRFHHFRSGHCSCGDYW 617
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 159/320 (49%), Gaps = 28/320 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC-AIKSCSALHDLHSGKQ- 94
NV SWN++++ L+R G EA F +M P R++ A+ SC A H+G
Sbjct: 114 NVTSWNTMLSGLSRSGAVGEARAVFLAM------PARNSISWNAMVSCFA----HAGDMC 163
Query: 95 AHQQAFIFGFHRD-VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
A ++ F ++ + +A++ Y G + A + F+ +P +R++VSW +++ GYV+
Sbjct: 164 AAEECFEDAPDKENAVLWTAMVSGYMDSGHVEKAMQFFEAMP--VRSLVSWNAVVAGYVK 221
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N A +AL +FK + + +V + ++SVL CS ++ G H +
Sbjct: 222 NSRAEDALWVFKTMVRDA-----------DVRPNESTLSSVLLGCSNLSALGFGRQVHQW 270
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
K V G +L+ Y + G +D + K+F M +D + WN++I+ YA +G EA
Sbjct: 271 CTKLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREA 330
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSII 332
+++F++M KS V+ N +T AVL A H G+ G +C +E V + ++
Sbjct: 331 IELFEKM-KSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMV 389
Query: 333 DMYCKCGQVDLARKAFNQMK 352
D+ C+ G ++ A M
Sbjct: 390 DLLCRAGSLERAVSLIRSMP 409
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/621 (35%), Positives = 348/621 (56%), Gaps = 59/621 (9%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P ST+ I+ CS L GK+ H+ GF + + + L+ MY+KCG L DARK+
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 131 FDEIPQR-----------------------------IRNIVSWTSMLTGYVQNDNAREAL 161
FDE+P R ++ SWT+M+TGYV+ D EAL
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
+L+ L++ + N+F +V+IA +A + G + HG +++ G DS
Sbjct: 203 VLYS--LMQR-----VPNSRPNIF--TVSIAVAAAAAVKCIRRG--KEIHGHIVRAGLDS 251
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+ + ++L+D Y + G +D +R +FD ++EKD V+W S+I Y ++ E +F ++V
Sbjct: 252 DEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELV 311
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
S + + N T + VL A A L LGK +H + ++ + +S++DMY KCG +
Sbjct: 312 GSCE-RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI 370
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ A+ + + ++ SWT++I G + + EAL F ++K+G +P+++TFV+VLSAC
Sbjct: 371 ESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+HAGLV++G + ++ + + +HY C+VDLL R+G+ ++ +I M +K +
Sbjct: 431 THAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFL 490
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKN 521
W S+LG C + N+DL E AA++LF++EP N +V ++NIYA AG+WE+ + R M+
Sbjct: 491 WASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQE 550
Query: 522 RRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHD 581
+ K PG S E++ K H F+ D HP + +I E+L EL K++E GYV + V+HD
Sbjct: 551 IGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHD 610
Query: 582 VDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIV 623
V+ E+KE L HSEKLA NLR C DCH I+ IS + R+I
Sbjct: 611 VEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKIT 670
Query: 624 VRDSKRFHYFKDGLCSCGDYW 644
VRDS RFH F++G CSCGDYW
Sbjct: 671 VRDSTRFHCFENGQCSCGDYW 691
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 107/251 (42%), Gaps = 20/251 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K V+K+ V SW S+I + E FS + P TF + +C+ L
Sbjct: 275 IFDKIVEKD-VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLT 333
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
GKQ H GF F SS+L+DMY+KCG + A+ + D P+ ++VSWTS+
Sbjct: 334 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK--PDLVSWTSL 391
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV-TVNGV 206
+ G QN EAL F L ++ D V +VLSAC+ V
Sbjct: 392 IGGCAQNGQPDEALKYFDLLLKSGTK------------PDHVTFVNVLSACTHAGLVEKG 439
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA-VTWNSII---A 262
E + K L+D AR G + + V M K + W S++ +
Sbjct: 440 LEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCS 499
Query: 263 IYAQNGLAAEA 273
Y LA EA
Sbjct: 500 TYGNIDLAEEA 510
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/633 (36%), Positives = 350/633 (55%), Gaps = 35/633 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + K ++ W+++I L + G S E+++ F MR P + T + + + +L
Sbjct: 373 KTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQ 432
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G+ H + +GF DV VS+AL+ MY K G + D KL++ + R +++SW + L+G
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDR--DLISWNAYLSG 490
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV-AIASVLSACSRVTVNGVTEG 209
L +F +LEE F+ ++ S+L +CS +
Sbjct: 491 LHDCGMYDRPLTIFYH-MLEEG------------FIPNMYTFISILGSCSCLFDVHYGRQ 537
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
H +IK D V LID YA+ +++ + F+ + +D TW II YAQ
Sbjct: 538 VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQ 597
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
+AL+ F QM + VK N TL+ L + L L G+ +H V K + VG+
Sbjct: 598 GEKALNYFRQM-QQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGS 656
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+++DMY KCG ++ A F + ++ +W +I GY + + +AL F M+ G+ P
Sbjct: 657 ALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISP 716
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ +TF +LSACSH GLV+EG N+M +F I P V+H CMVD+LGR GK E D
Sbjct: 717 DGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDF 776
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I+ M++ + ++W ++LGA ++H N+ LGE AA KLFEL+P ++LLSNI+A GRW
Sbjct: 777 IQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRW 836
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
+DV+R RSLM ++ + K PG S VE G+VH F+ D HPQ ++I+ L+EL+ +L +
Sbjct: 837 DDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASI 896
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
YV V+H+V + EK+ LR HSE+LA NLR+C DCH V+
Sbjct: 897 QYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVM 956
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ IS + ++EIVVRD +RFH+FK+G CSC D+W
Sbjct: 957 KHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 224/445 (50%), Gaps = 26/445 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ +F ++N+V +WN ++ A+ GD L+ F SM +L + T +K C+
Sbjct: 268 SKMFIGMPEQNDV-TWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCAN 326
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+L G+ H G+ + F+ L+DMYSKCG DA +F I + +IV W+
Sbjct: 327 SKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKK--PDIVVWS 384
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+++T Q + E++ LF L ++ + I S+LSA +
Sbjct: 385 ALITCLDQQGQSEESIKLFHLMRLGDT------------LPNQYTICSLLSAATNTGNLQ 432
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H V K GF+++V V N L+ Y + G V K+++ M+++D ++WN+ ++
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
G+ L +F M++ + N T ++L + + L + G+ +H +IK L+++
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIP-NMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNN 551
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V T++IDMY KC ++ A AFN++ +++ +WT +I Y + +AL+ F +M +
Sbjct: 552 FVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQE 611
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTM----GHEFNIEPGVEHYGCMVDLLGRAG 441
GV+PN T LS CS + EG L++M GH ++ G +VD+ + G
Sbjct: 612 GVKPNEFTLAGCLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVG----SALVDMYAKCG 666
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLL 466
++EA L E + ++ D + W +++
Sbjct: 667 CMEEAEALFEAL-IRRDTIAWNTII 690
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 187/369 (50%), Gaps = 21/369 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SW ++I L G + +++ F M+ + P T +K+CS L GKQ H
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
QAF G D+FV SAL+D+Y+KCGE+ A K+F +P+ +N V+W +L GY Q +
Sbjct: 237 AQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPE--QNDVTWNVLLNGYAQRGD 294
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
L LF + + +C + + +VL C+ + H +IK
Sbjct: 295 VTGVLKLFCSMMELDVKC------------NEFTLTTVLKGCANSKNLKQGQVIHSLIIK 342
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G++ +G L+D Y++ G + VF + + D V W+++I Q G + E++ +
Sbjct: 343 CGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKL 402
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F +++ D N T+ ++L A + G L+ G+ IH V K E V V +++ MY
Sbjct: 403 F-HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYM 461
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGY---GMHCRAREALDLFYKMIKAGVRPNYIT 393
K G V K + M ++++ SW A ++G GM+ R L +FY M++ G PN T
Sbjct: 462 KNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDR---PLTIFYHMLEEGFIPNMYT 518
Query: 394 FVSVLSACS 402
F+S+L +CS
Sbjct: 519 FISILGSCS 527
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 193/387 (49%), Gaps = 17/387 (4%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++ C++ L K H + D + +L+++Y+KC + AR + ++P R
Sbjct: 119 LRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR-- 176
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++VSWT+++ G V A +++ LF+E ++ + + +A+ L ACS
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEM------------QNEGIMPNEFTLATGLKACS 224
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ + H K G ++ VG+ L+D YA+ G ++++ K+F GM E++ VTWN
Sbjct: 225 LCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNV 284
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
++ YAQ G L +F M++ DVKCN TL+ VL A+ L+ G+ IH +IK
Sbjct: 285 LLNGYAQRGDVTGVLKLFCSMME-LDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKC 343
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
E + +G ++DMY KCG A F +K+ ++ W+A+I ++ E++ LF
Sbjct: 344 GYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF 403
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
+ M PN T S+LSA ++ G +Q G ++ ++ E V +V + +
Sbjct: 404 HLMRLGDTLPNQYTICSLLSAATNTGNLQYG-QSIHACVWKYGFETDVAVSNALVTMYMK 462
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLL 466
G + + L E M V D + W + L
Sbjct: 463 NGCVHDGTKLYESM-VDRDLISWNAYL 488
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/626 (36%), Positives = 348/626 (55%), Gaps = 80/626 (12%)
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK-CGELS 125
+SL T ++F +++C DL S + ++ + R + ++ Y+K G++
Sbjct: 74 VSLNKTIASF---VRAC----DLESARNVFEKMSV----RTTVTWNTMLSGYTKVAGKVK 122
Query: 126 DARKLFDEIPQR-----------------------------IRNIVSWTSMLTGYVQNDN 156
+A +LFD+IP+ +++I SW ++++G+ QN
Sbjct: 123 EAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQ 182
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
++A LF ++ E + V+ ++++S +G E A
Sbjct: 183 MQKAFDLFS--VMPEK--------------NGVSWSAMISG---YVEHGDLEAAEELYKN 223
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G S V V ++ Y + G V+++ ++F M K+ VTWNS+IA Y +N A + L V
Sbjct: 224 VGMKSVV-VETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKV 282
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F M++S V+ N ++LS+VLL ++L L LG+ +H V K L + TS+I MYC
Sbjct: 283 FKTMIESR-VRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYC 341
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG +D A K F +M K+V SW AMI+GY H R+AL LF KM ++P++ITFV+
Sbjct: 342 KCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVA 401
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
V+ AC+HAG V G + +M EF IE HY C++DLLGRAG+L EA LI+ M K
Sbjct: 402 VILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFK 461
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
++G+LLGACRIHKN+DL E AA+ L L+P + +V L+NIYA +W+ V + R
Sbjct: 462 PHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVR 521
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
+MK + K PG+S +E++ H F D+ HP+ I++ L EL+ K++ GYV D+
Sbjct: 522 KMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLE 581
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
+HDV++E KE L HSEKLA NLRVCGDCH I+ IS +
Sbjct: 582 FALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIE 641
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
REI+VRD+ RFH+F++G CSCGDYW
Sbjct: 642 KREIIVRDTTRFHHFRNGFCSCGDYW 667
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/539 (40%), Positives = 327/539 (60%), Gaps = 30/539 (5%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L+ AR LFD +P+R + SW+++++ +V++ R AL +++ L E G +DN
Sbjct: 109 LASARALFDRMPRR--DHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSG-----ADN 161
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
F S A+A+ +A + H V++RG D++ V + L D YA+ G +D +R
Sbjct: 162 EFTASSALAAATAARCARAGREL----HCHVVRRGIDADAVVWSALADMYAKFGRLDDAR 217
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VFD M +D V+W +++ Y G E +F +M++S + N T + VL A A
Sbjct: 218 SVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRS-GILPNEFTYAGVLRACAEF 276
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
+LGK +H ++ K +S G++++ MY K G + A + F M + ++ SWTAMI
Sbjct: 277 TSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMI 336
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
+GY + + EAL F ++ +G RP+++TFV VLSAC+HAGLV +G +++ ++ I
Sbjct: 337 SGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGI 396
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
E +HY C++DLL R+G + A D+I M VK + +W SLLG CRIHKNV L AA+
Sbjct: 397 EHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAE 456
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
LFE+EP N +V L+NIYA+ G +++VE R M+ R + K P S +E+ +VH FL
Sbjct: 457 ALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFL 516
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
VGDK HPQ E+IY L++L VK++E GYV D V+HDV+ E+K+ + HSE+LA
Sbjct: 517 VGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFG 576
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCHT I+LISK+V REI+VRDS RFH+FK+G CSC DYW
Sbjct: 577 IIATPKGSPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 181/391 (46%), Gaps = 28/391 (7%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSA 85
LF++ + + + FSW+++++ R G AL + M R+ + + F + +A
Sbjct: 114 ALFDR-MPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAAA 172
Query: 86 LHDLHS--GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ G++ H G D V SAL DMY+K G L DAR +FD +P +R++VS
Sbjct: 173 TAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMP--VRDVVS 230
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
WT+ML Y E LF + + + A VL AC+ T
Sbjct: 231 WTAMLDRYFDAGRDGEGFRLFVRMM------------RSGILPNEFTYAGVLRACAEFTS 278
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ + HG + K G+ L+ Y++ G + + +VF GM + D V+W ++I+
Sbjct: 279 EKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISG 338
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI-HDQVIKMDLE 322
YAQNG EAL FD M+ S+ + + VT VL A AH G++ G I H K +E
Sbjct: 339 YAQNGQPDEALHCFD-MLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIE 397
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYK 381
+ +ID+ + G + A N M K N W +++ G CR + + L +
Sbjct: 398 HTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGG----CRIHKNVRLAWW 453
Query: 382 MIKA--GVRP-NYITFVSVLSACSHAGLVQE 409
+A + P N T+V++ + + GL E
Sbjct: 454 AAEALFEIEPENPATYVTLANIYASVGLFDE 484
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/580 (39%), Positives = 332/580 (57%), Gaps = 50/580 (8%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQR 137
I CS L KQ H Q G D F +S LI S L A+++FD+IP
Sbjct: 42 IDQCSETKQL---KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP 98
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
N+ +W +++ Y + N ++LL+F L + + F D ++ A
Sbjct: 99 --NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPD-----------FPDKFTFPFLIKA 145
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
S + + HG VIK S+V + N+LI YA+ G + + +VF +D V+W
Sbjct: 146 ASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSW 205
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
NS+I + Q G EAL++F +M ++ +VK N +T+ VL A A G+ +H +
Sbjct: 206 NSMITAFVQGGCPEEALELFQEM-ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIE 264
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG---------- 367
+ + ES+ + +++DMY KCG V+ A++ F++M EK++ SWT M+ GY
Sbjct: 265 RNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQG 324
Query: 368 --MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
MH ++A+ LF KM + V+PN +TF ++L ACSH GLV+EG + N M + + P
Sbjct: 325 LAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLP 384
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
GV+HY CMVD+LGRAG L+EA +LIE M + VWG+LLGAC IH+NV L E A +L
Sbjct: 385 GVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQL 444
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
ELEP N G +VLLSNIYA AG+W+ V R LM++ L K PG S +E+ G VH FLVG
Sbjct: 445 IELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVG 504
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE-KEMTLRIHSEKLA----- 599
D HP +KIY L+E+ +L+ +GYV + + ++ V++E+ KE L +HSEKLA
Sbjct: 505 DNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGL 564
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRD 626
NLRVCGDCH+V +L+SK+ DREI++RD
Sbjct: 565 ISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRD 604
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 178/355 (50%), Gaps = 36/355 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSALHDLHS 91
+ N+++WN++I A + ++L F M S P + TFP IK+ S L +L +
Sbjct: 95 IPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFT 154
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
GK H DVF+ ++LI Y+KCGEL ++F P+ R++VSW SM+T +
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPR--RDVVSWNSMITAF 212
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
VQ EAL LF+E + NV + + + VLSAC++ + H
Sbjct: 213 VQGGCPEEALELFQEM------------ETQNVKPNGITMVGVLSACAKKSDFEFGRWVH 260
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ----- 266
++ + + + N ++D Y + G V+ ++++FD M EKD V+W +++ YA+
Sbjct: 261 SYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYD 320
Query: 267 --NGLA-----AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
GLA +A+ +F +M + VK NAVT + +L A +H+G++ G+ +Q M
Sbjct: 321 AAQGLAMHGHGKDAIALFSKM-QEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQ---M 376
Query: 320 DLEESVIVGTS----IIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
+L V+ G ++D+ + G ++ A + +M S W A++ +H
Sbjct: 377 ELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIH 431
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/669 (33%), Positives = 362/669 (54%), Gaps = 62/669 (9%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKS 82
++ LF +++ V S+N++I + G +++ + ++ R+ S+ PTR T I
Sbjct: 97 DMERLFASMPERDAV-SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMV 155
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI---- 138
SAL D G H Q GF FV S L+DMY+K G + DAR++F E+ +
Sbjct: 156 ASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMY 215
Query: 139 -------------------------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
R+ ++WT+M+TG QN EAL +F+
Sbjct: 216 NTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRM------ 269
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY 233
++ V +D S+L+AC + + + H ++ + ++ V VG+ L+D Y
Sbjct: 270 ------RAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMY 323
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
++ + ++ VF M ++ ++W ++I Y QN + EA+ F +M + +K + TL
Sbjct: 324 SKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM-QMDGIKPDDFTL 382
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
+V+ + A+L L G H + L + V +++ +Y KCG ++ A + F++M
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
+ SWTA++ GY +A+E +DLF KM+ G++P+ +TF+ VLSACS AGLV++G +
Sbjct: 443 HDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDY 502
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
++M + +I P +HY CM+DL R+G+ KEA + I+ M D W +LL +CR+
Sbjct: 503 FDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
N+++G+ AA+ L E +P N +VLL +++A G+W +V R M++R++ K PG S +
Sbjct: 563 NMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWI 622
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
+ + KVH F D+ HP +IYE LE LN K+ E GY D++SV+HDV +K +
Sbjct: 623 KYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISH 682
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSEKLA NLRVC DCH + ISK+ R+I+VRD+ RFH F D
Sbjct: 683 HSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSD 742
Query: 636 GLCSCGDYW 644
G CSCGD+W
Sbjct: 743 GTCSCGDFW 751
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 219/459 (47%), Gaps = 84/459 (18%)
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIP-----------------------QRI------ 138
F+ + L+ Y+K G L+ AR++FDE+P +R+
Sbjct: 48 TFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPE 107
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
R+ VS+ +++TG+ + ++ L++ L EES V + +++++
Sbjct: 108 RDAVSYNALITGFSSTGSPARSVQLYRALLREES-----------VRPTRITLSAMIMVA 156
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG---------- 248
S ++ + H V++ GF + VG+ L+D YA+ G + +R+VF
Sbjct: 157 SALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYN 216
Query: 249 ---------------------MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
M+++D++TW +++ QNGL EALDVF +M ++ V
Sbjct: 217 TLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRM-RAEGVG 275
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
+ T ++L A L GK IH + + E++V VG++++DMY KC + LA
Sbjct: 276 IDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F +M +N+ SWTAMI GYG + + EA+ F +M G++P+ T SV+S+C++ +
Sbjct: 336 FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASL 395
Query: 408 QEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWG 463
+EG + H + G+ Y +V L G+ G +++A+ L + M D V W
Sbjct: 396 EEGAQF-----HCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWT 449
Query: 464 SLL-GACRIHKNVDLGEIAAKKLFE-LEPNNCGYHVLLS 500
+L+ G + K + ++ K L L+P+ + +LS
Sbjct: 450 ALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLS 488
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/483 (42%), Positives = 306/483 (63%), Gaps = 21/483 (4%)
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
++V + + +L +C+ + E H ++K GF+ ++ + L+D YA+ G+V+
Sbjct: 24 NDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEE 83
Query: 242 SRKVFDGMIEKDA--VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+R +FD M E+++ VTWN++I+ Y Q G A+ +F QM +S +VK VT+ ++L A
Sbjct: 84 ARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQM-QSENVKPTEVTMVSLLSA 142
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
AHLG L +G+ IH + L+ V++G ++IDMYCKCG ++ A F+ + KN+ W
Sbjct: 143 CAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCW 202
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
++I G GM+ R EA+ F M K G++P+ +TFV +LS CSH+GL+ G + + M
Sbjct: 203 NSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLG 262
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
+ +EPGVEHYGCMVDLLGRAG LKEA +LI M +K + +V GSLL AC+IHK+ LGE
Sbjct: 263 VYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGE 322
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
++L EL+P + G +V LSN+YA+ RW+DV R LM R + KTPG S +E+ V
Sbjct: 323 QVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIV 382
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
H F+ GD HPQ +I +L+E+ +L+ G+V + +V+HD+++EEKE +R HSE++A
Sbjct: 383 HEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIA 442
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLR C DCH+ ++LIS REI+VRD KRFH+F++G CSC
Sbjct: 443 VAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCN 502
Query: 642 DYW 644
DYW
Sbjct: 503 DYW 505
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 147/295 (49%), Gaps = 14/295 (4%)
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
+S M + + P++++F ++SC+ + G+ H Q GF D+ + + L+D Y+K
Sbjct: 18 YSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAK 77
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
G + +AR LFD + +R N V+W +M++ YVQ A+ +F++
Sbjct: 78 HGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQM------------Q 125
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
S+NV V + S+LSAC+ + + E HG++ + +V +GN LID Y + G ++
Sbjct: 126 SENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALE 185
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+ VF G+ K+ WNSII NG EA+ F M K +K + VT +L
Sbjct: 186 AAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKE-GIKPDGVTFVGILSGC 244
Query: 301 AHLGVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
+H G+L G+ +++ + LE V ++D+ + G + A + M K
Sbjct: 245 SHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMK 299
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 49/304 (16%)
Query: 18 KHSTNTNLTTLFNKYVDKN-NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTF 76
KH LF+ ++N N +WN++I+ + G+ A+ F M+ ++ PT T
Sbjct: 77 KHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTM 136
Query: 77 PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
+ +C+ L L G+ H DV + +ALIDMY KCG L A +F + +
Sbjct: 137 VSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSR 196
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
+NI W S++ G N EA+ F++ E E + D V +LS
Sbjct: 197 --KNIFCWNSIIVGLGMNGRGEEAI---AAFIVMEKE---------GIKPDGVTFVGILS 242
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
CS +G+ +R F +GV Y +E
Sbjct: 243 GCSH---SGLLSAG-----QRYFSEMLGV-------YG---------------LEPGVEH 272
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
+ ++ + + G EAL +++++ +K N++ L ++L A +LG+ + Q+
Sbjct: 273 YGCMVDLLGRAGYLKEAL----ELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQL 328
Query: 317 IKMD 320
+++D
Sbjct: 329 LELD 332
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/636 (36%), Positives = 362/636 (56%), Gaps = 38/636 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ ++ + SWN++I+ L + G+ EA+ +S MR+ ++P+ ++ SC+ L L
Sbjct: 439 QLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLT 498
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+G+Q H A +G D VS+ L+ MY +CG +SD K+F+ + + + VSW +M+
Sbjct: 499 AGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEH--DEVSWNTMMGV 556
Query: 151 YVQNDNA-REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
+ E + +F + GG N V ++L+A S ++V + +
Sbjct: 557 MASSQTPISEIVKVFNNMMR-----GGLIPNK-------VTFINLLAALSPLSVLELGKQ 604
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK-DAVTWNSIIAIYAQNG 268
H V+K G + V N LI YA+ G + +F M ++ DA++WNS+I+ Y NG
Sbjct: 605 VHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNG 664
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
EA+D M+ S + + T S +L A A + L G +H I+ LE V+V
Sbjct: 665 NLQEAMDCVWLMIHSGQIM-DCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVE 723
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
++++DMY KCG+VD A K FN M ++N SW +MI+GY H R+A+++F +M+++
Sbjct: 724 SALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRES 783
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+++TFVSVLSACSHAGLV+ G + M + I P +EHY C++DLLGRAGK+ + +
Sbjct: 784 PDHVTFVSVLSACSHAGLVERGLEYFEMMP-DHGILPQIEHYSCVIDLLGRAGKIDKIKE 842
Query: 449 LIEGMKVKADFVVWGSLLGACRIHK---NVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
I+ M ++ + ++W ++L ACR K N+DLG A++ L E+EP N +VL SN +A
Sbjct: 843 YIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAA 902
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
G WED + R+ M+ K G S V L VH F+ GD+ HP ++IYE L L
Sbjct: 903 TGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQN 962
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------NLRVCGDCH 608
++ GYV ++D+++E KE L HSEKLA NLRVCGDCH
Sbjct: 963 IRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAFVLTRSSSGPIRIMKNLRVCGDCH 1022
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
R IS+++ R+I++RDS RFH+FKDG CSCGDYW
Sbjct: 1023 IAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 217/454 (47%), Gaps = 26/454 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK---LSLTPTRSTFPCAIKS 82
+ +F++ ++N V SW +++ G + EA R F +M + PT TF +++
Sbjct: 116 SQVFDEMPERNAV-SWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRA 174
Query: 83 CS--ALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC--GELSDARKLFDEIPQRI 138
C L Q H + + V +ALI MY C G A+++FD P I
Sbjct: 175 CQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTP--I 232
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
R++++W ++++ Y + + LFK+ ++ + +++ F + AS+ S
Sbjct: 233 RDLITWNALMSVYAKKGDVASTFTLFKD--MQRGDSRIQLRPTEHTFGSLITAASLSSGS 290
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
S V + +V+K G S++ VG+ L+ A+AR G D ++ +F + +K+AVT N
Sbjct: 291 SAVLDQVLV-----WVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLN 345
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV----LRLGKCIHD 314
+I + + EA+ +F + DV NA T +L A+A + LR+G+ +H
Sbjct: 346 GLIVGLVRQDFSEEAVKIFVGTRNTVDV--NADTYVVLLSALAEYSISEEGLRIGRVVHG 403
Query: 315 QVIKMDLEE-SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+++ L + + V +++MY KCG ++ A K F M+ + SW +I+ +
Sbjct: 404 HMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCE 463
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
EA+ + M ++ + P+ +S LS+C+ L+ G ++ ++ ++ +
Sbjct: 464 EAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAG-QQVHCDAVKWGLDLDTSVSNVL 522
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
V + G G + + + + M + D V W +++G
Sbjct: 523 VKMYGECGAMSDYWKVFNSM-AEHDEVSWNTMMG 555
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 185/397 (46%), Gaps = 33/397 (8%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D +S + H + G + D+F+ + L++ Y+K L+ A ++FDE+P+ RN VSWT +
Sbjct: 76 DANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPE--RNAVSWTCL 133
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN--G 205
++GYV + A EA +F+ +L E + G S ++L AC + G
Sbjct: 134 VSGYVLHGIAEEAFRVFRA-MLREVQAGCRPT--------SFTFGTLLRACQDGGPDRLG 184
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARG--GHVDVSRKVFDGMIEKDAVTWNSIIAI 263
HG V K + S V N LI Y G ++++VFDG +D +TWN+++++
Sbjct: 185 FAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSV 244
Query: 264 YAQNGLAAEALDVFDQMVKS---TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ----V 316
YA+ G A +F M + ++ T ++ I + + DQ V
Sbjct: 245 YAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSL---ITAASLSSGSSAVLDQVLVWV 301
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
+K + VG++++ + + G D A+ F +K+KN + +I G + EA+
Sbjct: 302 LKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAV 361
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC---- 432
+F + V N T+V +LSA + + +EG + + H + G+
Sbjct: 362 KIFVG-TRNTVDVNADTYVVLLSALAEYSISEEGLR-IGRVVHGHMLRTGLTDLKIAVSN 419
Query: 433 -MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+V++ + G ++ A + + M+ D + W +++ A
Sbjct: 420 GLVNMYAKCGAIESASKIFQLMEA-TDRISWNTIISA 455
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 112/243 (46%), Gaps = 19/243 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF D+ + SWNS+I+ G+ EA+ M TF + +C+++
Sbjct: 640 LFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVA 699
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G + H DV V SAL+DMYSKCG + A KLF+ + Q RN SW SM
Sbjct: 700 ALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQ--RNEFSWNSM 757
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY ++ R+A+ +F+E L D V SVLSACS + V
Sbjct: 758 ISGYARHGLGRKAIEIFEEMLRSRES------------PDHVTFVSVLSACSHAGL--VE 803
Query: 208 EGAHGF--VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIY 264
G F + G ++ + +ID R G +D ++ M IE +A+ W +++
Sbjct: 804 RGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVAC 863
Query: 265 AQN 267
Q+
Sbjct: 864 RQS 866
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 18/277 (6%)
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
E H +IKRG + ++ + N L+++YA+G + + +VFD M E++AV+W +++ Y +
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140
Query: 268 GLAAEALDVFDQMVKSTDVKC--NAVTLSAVLLAIAHLGVLRLGKC--IHDQVIKMDLEE 323
G+A EA VF M++ C + T +L A G RLG +H V K +
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYAS 200
Query: 324 SVIVGTSIIDMY--CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK 381
+ V ++I MY C G LA++ F+ +++ +W A+++ Y LF
Sbjct: 201 NTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKD 260
Query: 382 MIKAG----VRPNYITFVSVLS----ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
M + +RP TF S+++ + + ++ + W+ G ++ G +
Sbjct: 261 MQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVG----SAL 316
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
V R G EA D+ +K K + G ++G R
Sbjct: 317 VSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVR 353
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ LFN +N FSWNS+I+ AR G +A+ F M + +P TF + +CS
Sbjct: 740 SKLFNSMTQRNE-FSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSH 798
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ G + + G + S +ID+ + G++ ++ +P N + W
Sbjct: 799 AGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIE-PNALIWR 857
Query: 146 SMLTGYVQN------DNAREA 160
++L Q+ D REA
Sbjct: 858 TVLVACRQSKDGSNIDLGREA 878
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/518 (41%), Positives = 310/518 (59%), Gaps = 37/518 (7%)
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
+GY++ AR + ++ L +V + ++ AC + E
Sbjct: 67 SGYLRWQLARNCIFMYSRML------------HKSVSPNKFTYPPLIRAC--CIDYAIEE 112
Query: 209 GA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD--AVTWNSIIAIY 264
G H V+K GF ++ N LI Y ++ +R+VFD M ++D +V+WN++IA Y
Sbjct: 113 GKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAY 172
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
Q+ EA +FD+M + +V + +++L A LG L GK IH + K +E
Sbjct: 173 VQSNRLHEAFALFDRM-RLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELD 231
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+ T++IDMYCKCG ++ A + FN++ +K + SW MI G MH + A++LF +M +
Sbjct: 232 SKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMER 291
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
V P+ ITFV+VLSAC+H+GLV+EG H+ M ++PG+EH+GCMVDLLGRAG L+
Sbjct: 292 EMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLE 351
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
EA LI M V D V G+L+GACRIH N +LGE KK+ ELEP+N G +VLL+N+YA
Sbjct: 352 EARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYA 411
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
+AGRWEDV + R LM +R + K PGFS++E V F+ G + HPQ ++IY L+E+
Sbjct: 412 SAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILE 471
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
++ +GYV D V+HD+D+EEKE L HSEKLA NLR+C D
Sbjct: 472 TIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRD 531
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH +LISKV DREI++RD RFH+F+ G CSC DYW
Sbjct: 532 CHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
+S M S++P + T+P I++C + + GKQ H FGF D F + LI MY
Sbjct: 82 YSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVN 141
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
L AR++FD +PQR RN VSW +M+ YVQ++ EA LF LE
Sbjct: 142 FQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLE---------- 191
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
NV +D AS+LSAC+ + + HG++ K G + + + T+ID Y + G ++
Sbjct: 192 --NVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLE 249
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+ +VF+ + +K +WN +I A +G A+++F +M + V + +T VL A
Sbjct: 250 KASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREM-VAPDGITFVNVLSAC 308
Query: 301 AHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
AH G++ GK + + + L+ + ++D+ + G ++ ARK N+M
Sbjct: 309 AHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEM 360
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 21/233 (9%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D+N+V SWN++IA + EA F MR ++ + + +C+ L L GK
Sbjct: 159 DRNSV-SWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGK 217
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H G D +++ +IDMY KCG L A ++F+E+PQ + I SW M+ G
Sbjct: 218 WIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQ--KGISSWNCMIGGLAM 275
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+ A+ LFKE + V D + +VLSAC+ + V EG H F
Sbjct: 276 HGKGEAAIELFKEM------------EREMVAPDGITFVNVLSACAHSGL--VEEGKHYF 321
Query: 214 VIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
G + ++D R G ++ +RK+ + M + DA +++
Sbjct: 322 QYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVG 374
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/636 (34%), Positives = 357/636 (56%), Gaps = 35/636 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF +K+NV ++N+++ ++ G + +A+ F M+ L P+ TF + + +
Sbjct: 196 LFKHMAEKDNV-TFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMD 254
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D+ G+Q H F +VFV++AL+D YSK + +ARKLF E+P+ + +S+ +
Sbjct: 255 DIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEV--DGISYNVL 312
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+T N E+L LF+E + A++LS + +
Sbjct: 313 ITCCAWNGRVEESLELFRELQFTRFD------------RRQFPFATLLSIAANSLNLEMG 360
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H I SEV VGN+L+D YA+ + ++F + + +V W ++I+ Y Q
Sbjct: 361 RQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQK 420
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL + L +F +M ++ + ++ T +++L A A+L L LGK +H ++I+ +V
Sbjct: 421 GLHEDGLKLFVEMHRA-KIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFS 479
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G++++DMY KCG + A + F +M +N SW A+I+ Y + AL F +MI +G+
Sbjct: 480 GSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGL 539
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+PN ++F+S+L ACSH GLV+EG + N+M + +EP EHY MVD+L R+G+ EA
Sbjct: 540 QPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAE 599
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP-NNCGYHVLLSNIYANA 506
L+ M + D ++W S+L +CRIHKN +L AA +LF ++ + +V +SNIYA A
Sbjct: 600 KLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAA 659
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
G W+ V + + ++ R + K P +S VE++ K H F D HPQ ++I L+EL ++
Sbjct: 660 GEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQM 719
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+E GY D T +H+VD+E K +L+ HSE++A NLR C DCH
Sbjct: 720 EEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCH 779
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I++ISK+V+REI VRDS RFH+F DG CSC DYW
Sbjct: 780 AAIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 229/491 (46%), Gaps = 43/491 (8%)
Query: 24 NLTT---LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAI 80
NL+T LF+ V ++ V +W +I A+ +EA F+ M + + P T +
Sbjct: 88 NLSTARSLFDSMVQRS-VVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLL 146
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
+ ++ Q H G+ + V ++L+D Y K L A LF + + ++
Sbjct: 147 SGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAE--KD 204
Query: 141 IVSWTSMLTGYVQNDNAREALLLF---KEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
V++ ++LTGY + +A+ LF ++ SE A+VL+A
Sbjct: 205 NVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSE---------------FTFAAVLTA 249
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
++ + H FV+K F V V N L+D Y++ + +RK+F M E D +++
Sbjct: 250 GIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISY 309
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N +I A NG E+L++F ++ + T + +L A+ L +G+ IH Q I
Sbjct: 310 NVLITCCAWNGRVEESLELFREL-QFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAI 368
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
D V+VG S++DMY KC + A + F + ++ WTA+I+GY + L
Sbjct: 369 VTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLK 428
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM---GHEFNIEPGVEHYGCMV 434
LF +M +A + + T+ S+L AC++ + G + + G N+ G +V
Sbjct: 429 LFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSG----SALV 484
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------L 488
D+ + G +KEA + + M V+ + V W +L+ A +N D G A + FE L
Sbjct: 485 DMYAKCGSIKEALQMFQEMPVR-NSVSWNALISA--YAQNGDGGH--ALRSFEQMIHSGL 539
Query: 489 EPNNCGYHVLL 499
+PN+ + +L
Sbjct: 540 QPNSVSFLSIL 550
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 173/339 (51%), Gaps = 21/339 (6%)
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
+SM K P F +++ DL + ++ + H++V ++ +I Y K
Sbjct: 31 ASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMP----HKNVISTNTMIMGYLKS 86
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G LS AR LFD + QR ++V+WT ++ GY Q++ EA LF +
Sbjct: 87 GNLSTARSLFDSMVQR--SVVTWTMLIGGYAQHNRFLEAFNLFADMC------------R 132
Query: 182 DNVFVDSVAIASVLSACSRV-TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+ D + +A++LS + +VN V + HG V+K G+DS + V N+L+D+Y + +
Sbjct: 133 HGMVPDHITLATLLSGFTEFESVNEVAQ-VHGHVVKVGYDSTLMVCNSLLDSYCKTRSLG 191
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
++ +F M EKD VT+N+++ Y++ G +A+++F +M + + + T +AVL A
Sbjct: 192 LACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKM-QDLGFRPSEFTFAAVLTAG 250
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
+ + G+ +H V+K + +V V +++D Y K ++ ARK F +M E + S+
Sbjct: 251 IQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYN 310
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+I + R E+L+LF ++ F ++LS
Sbjct: 311 VLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLS 349
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
NT+I Y + G++ +R +FD M+++ VTW +I YAQ+ EA ++F M + V
Sbjct: 77 NTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMV 136
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+ +TL+ +L + +H V+K+ + +++V S++D YCK + LA
Sbjct: 137 P-DHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACH 195
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
F M EK+ ++ A++ GY +A++LF+KM G RP+ TF +VL+A
Sbjct: 196 LFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA 249
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%)
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
++VI ++I Y K G + AR F+ M +++V +WT +I GY H R EA +LF M
Sbjct: 71 KNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADM 130
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQE 409
+ G+ P++IT ++LS + V E
Sbjct: 131 CRHGMVPDHITLATLLSGFTEFESVNE 157
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/574 (38%), Positives = 340/574 (59%), Gaps = 25/574 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ K+ V WN ++ + GD A F MR+ P TF C + C++
Sbjct: 204 LFDRMPSKDGVL-WNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEI 262
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSS--ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
++ G Q H G D V++ ALID+Y KC ++ ARK+FD+ + +IV T
Sbjct: 263 MINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQ--RTPVDIVVCT 320
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M++GYV N AL +F+ L E +SV +ASVL AC+ +
Sbjct: 321 AMISGYVLNGMNNNALEIFRWLLQERMR------------ANSVTLASVLPACAGLAALT 368
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ + HG ++K G VG+ ++D YA+ G +D++ + F G+ +KDAV WNS+I +
Sbjct: 369 LGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCS 428
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QNG EA+D+F QM K + V++SA L A A+L L GK IH +++ +
Sbjct: 429 QNGKPEEAIDLFRQM-GMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDL 487
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+++IDMY KCG +DLA + F+ M+EKN SW ++IA YG H R +++L+LF+ M+
Sbjct: 488 FAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGD 547
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G++P+++TF++++SAC HAG V EG H+ M E I +EHY CMVDL GRAG+L E
Sbjct: 548 GIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNE 607
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A+ +I M D VWG+LLGACR+H NV+L E+A++ LF+L+P N GY+VLLSN++AN
Sbjct: 608 AFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHAN 667
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
AG+WE V + RSLMK R + K PG S +++ H F+ D+ HPQ +IY L+ L ++
Sbjct: 668 AGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLE 727
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
L++ GYV + +H T+ +H+ +++
Sbjct: 728 LRKEGYVPQLYLPMH-------PQTMGLHNGRIS 754
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/457 (31%), Positives = 227/457 (49%), Gaps = 32/457 (7%)
Query: 25 LTTLFNKYVDKNNVF---------SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRST 75
+ L ++D N+F WN +I G AL + M P + T
Sbjct: 90 MYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYT 149
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
FP IK+C L+ + G+ H + GF DVFV S+LI YS+ G + DAR LFD +P
Sbjct: 150 FPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP 209
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
++ V W ML GYV+N + A +F E E+ +SV A VL
Sbjct: 210 S--KDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETN------------PNSVTFACVL 255
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT--LIDAYARGGHVDVSRKVFDGMIEKD 253
S C+ + HG V+ G + + V NT LID Y + V+++RK+FD D
Sbjct: 256 SVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVD 315
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V ++I+ Y NG+ AL++F +++ ++ N+VTL++VL A A L L LGK +H
Sbjct: 316 IVVCTAMISGYVLNGMNNNALEIFRWLLQER-MRANSVTLASVLPACAGLAALTLGKELH 374
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
++K S VG++I+DMY KCG++DLA + F + +K+ W +MI + +
Sbjct: 375 GHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPE 434
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYG 431
EA+DLF +M AG + + ++ + LSAC++ + G H G F + E
Sbjct: 435 EAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFAE--S 491
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
++D+ + G L A + + M+ K + V W S++ A
Sbjct: 492 ALIDMYSKCGNLDLACRVFDTMEEKNE-VSWNSIIAA 527
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 199/418 (47%), Gaps = 36/418 (8%)
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
FS SL P + +++C+ L G+QAH Q + G + + + L+ MY
Sbjct: 37 FSIHNDDSLAPQLVSI---LQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVL 93
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG DA+ +F ++ R+ W M+ G+ ALL + + L CG
Sbjct: 94 CGAFLDAKNIFYQL--RLWCSEPWNWMIRGFTMMGQFDFALLFYFKML----GCG----- 142
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
D V+ AC + + H + GF+ +V VG++LI Y+ G +
Sbjct: 143 ---TLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIH 199
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+R +FD M KD V WN ++ Y +NG A VF +M + T+ N+VT + VL
Sbjct: 200 DARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEM-RRTETNPNSVTFACVLSVC 258
Query: 301 AHLGVLRLGKCIHDQVIKMDLE-ESVIVGT-SIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
A ++ G +H V+ LE +S + T ++ID+Y KC V++ARK F+Q ++
Sbjct: 259 ASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVV 318
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
TAMI+GY ++ AL++F +++ +R N +T SVL AC AGL T+G
Sbjct: 319 CTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPAC--AGLAAL------TLG 370
Query: 419 HEF------NIEPGVEHYG-CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
E N G + G ++D+ + G+L A+ G+ K D V W S++ +C
Sbjct: 371 KELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDK-DAVCWNSMITSC 427
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 10/216 (4%)
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
A L ++L L G+ H Q++ + + I+GT ++ MY CG A+ F
Sbjct: 46 APQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFY 105
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
Q++ W MI G+ M + AL ++KM+ G P+ TF V+ AC V
Sbjct: 106 QLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVAL 165
Query: 410 G---WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
G + MG E ++ G ++ G + +A L + M K D V+W +L
Sbjct: 166 GRVVHDKIQFMGFELDVFVGSS----LIKFYSENGCIHDARYLFDRMPSK-DGVLWNVML 220
Query: 467 GACRIHKNVD--LGEIAAKKLFELEPNNCGYHVLLS 500
+ + D G + E PN+ + +LS
Sbjct: 221 NGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLS 256
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/618 (36%), Positives = 344/618 (55%), Gaps = 44/618 (7%)
Query: 45 IADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF 104
+A R GD A AF+S +L T T + S L L ++ F
Sbjct: 19 VAAAVRRGDLAGAEEAFAST-QLKTTTTYNCLLAGYAKASGLIRLADARRL----FDSIP 73
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
H D + L+ + CG++ AR++F +P ++++ SW +M++G +N + EA +F
Sbjct: 74 HPDTVSYNTLLSCHFACGDIDGARRVFSTMP--VKDVTSWNTMVSGLSKNGASEEAAAMF 131
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
+ + + S N V ++A + + A + N + ++
Sbjct: 132 RIMPVRNAV-------SWNAMVAALACSGDMGAAEDLFRNAPEK------------TDAI 172
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+ ++ Y G+V + + F M ++ V+WN+++A Y +N A +AL VF MV+ +
Sbjct: 173 LWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDS 232
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
V+ NA TLS+VLL ++L L G+ +H +K+ L +V VGTS++ MYCKCG ++ A
Sbjct: 233 IVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDA 292
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
K F++M K++ +W AMI+GY H +A+ LF KM GV P++IT ++VL+AC H
Sbjct: 293 CKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHT 352
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGS 464
GL G TM + IEP ++HY CMVDLL RAG L+ A ++I M + +G+
Sbjct: 353 GLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGT 412
Query: 465 LLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRL 524
LL ACR++KN++ E AA+KL E +P N G +V L+NIYA A +W DV R R MK+ +
Sbjct: 413 LLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANKWADVSRVRRWMKDNAV 472
Query: 525 AKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQ 584
KTPG+S +E++G H F D+ HPQ I++ L+ L + ++ +GYV D+ +HDV+
Sbjct: 473 VKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQMLMKAMGYVPDLDFALHDVED 532
Query: 585 EEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRD 626
K L HSEKLA NLR+CGDCH +LISK+ DREI++RD
Sbjct: 533 SLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRD 592
Query: 627 SKRFHYFKDGLCSCGDYW 644
+ RFH+F+ G CSCGDYW
Sbjct: 593 TTRFHHFRGGHCSCGDYW 610
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 15/163 (9%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSALHDLHSGKQA 95
N+ SWN+V+A + + +ALR F +M + S+ P ST + CS L L G+Q
Sbjct: 201 NLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQV 260
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
HQ R+V V ++L+ MY KCG+L+DA K+FDE+ ++IV+W +M++GY Q+
Sbjct: 261 HQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEM--STKDIVAWNAMISGYAQHG 318
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
+A+ LF++ + V D + + +VL+AC
Sbjct: 319 GGMQAIKLFEKM------------KDEGVVPDWITLLAVLTAC 349
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/638 (35%), Positives = 356/638 (55%), Gaps = 35/638 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ LF++ K++V S+N +I + G EAL+ F MR + P+ TF +
Sbjct: 198 SQLFSEMPTKDSV-SFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVG 256
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
D+ G+Q H A + D+FV++AL+D YSK + A+ LFDE+P+ + VS+
Sbjct: 257 SEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPEL--DGVSYN 314
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
++TGY N ++ LFK G S + N A++LS +
Sbjct: 315 IIITGYAWNGQYEKSFDLFKRL-------QGTSFDRKNF-----PFATMLSVAAIELNLS 362
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H + SEV VGN L+D YA+ + + ++F + +++V W +II+IY
Sbjct: 363 MGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYV 422
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q G EAL +F +M + +V + T ++ L A A+L + LGK +H VI++ L SV
Sbjct: 423 QKGFHEEALKMFKEMNRE-NVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSV 481
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
G+ ++DMY CG + A + F +M ++N+ W A+I+ Y + A F MI++
Sbjct: 482 FSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIES 541
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G+ P+ ++F+SVL+ACSH GLV++ + N+M + ++P +HY M+D+L R+G+ E
Sbjct: 542 GLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNE 601
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP-NNCGYHVLLSNIYA 504
A +LI M + D V+W S+L +CRIHKN DL + AA +LF+++ + +V +SNIYA
Sbjct: 602 AENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYA 661
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
AG+WE+ + + M+ R + K +S VE+ +VH F D+ HPQ E+I + L
Sbjct: 662 EAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVE 721
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
+ + GY D + + +VD+E K +L+ HSE+LA NLR C D
Sbjct: 722 LMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVD 781
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH I++ISK+V REI VRDS RFH+F+DG CSCGDYW
Sbjct: 782 CHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 217/469 (46%), Gaps = 20/469 (4%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M +SSV+ +VS K LF +N V SW +I ++ EA
Sbjct: 72 MPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEV-SWTIMIGGYSQNNQPKEAFNL 130
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
++ M + + P TF + L Q H FGF + V ++L+D Y K
Sbjct: 131 YTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCK 190
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
L A +LF E+P ++ VS+ M+TGY + EAL LF + + + G
Sbjct: 191 TCCLDIASQLFSEMP--TKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGF--- 245
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+ A +S S + G + HG IK + ++ V N L+D Y++ ++D
Sbjct: 246 -------TFAAMLGMSVGSEDVIFG--QQIHGLAIKTSYVWDIFVANALLDFYSKHDYID 296
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+++ +FD M E D V++N II YA NG ++ D+F ++ ++ + N A +L++
Sbjct: 297 LAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPF--ATMLSV 354
Query: 301 AHLGV-LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A + + L +G+ H Q + V VG +++DMY KC + + A + F + +N W
Sbjct: 355 AAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPW 414
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
TA+I+ Y EAL +F +M + V + TF S L A ++ V G L++
Sbjct: 415 TAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQ-LHSSVI 473
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ V +VD+ G +K+A ++ + M + + V W +L+ A
Sbjct: 474 RLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDR-NIVCWNALISA 521
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/668 (35%), Positives = 366/668 (54%), Gaps = 65/668 (9%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ LF++ ++N + S+ ++I A +EA+ F + + F +K +
Sbjct: 93 SKLFDEMPERNTI-SFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVS 151
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
G H F G + FV +ALID YS CG + AR++FD I +++VSWT
Sbjct: 152 TDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGI--LYKDMVSWT 209
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
M+T + +ND +EAL LF + + G N+ ASV AC +
Sbjct: 210 GMVTCFAENDCFKEALKLFSQMRMV-----GFKPNN-------FTFASVFKACLGLEAFD 257
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
V + HG +K ++ ++ VG L+D Y + G +D +R+ F+ + +KD + W+ +IA YA
Sbjct: 258 VGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYA 317
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q+ + EA+++F QM ++ V N T ++VL A A + L LG IH VIK+ L V
Sbjct: 318 QSDQSKEAVEMFFQMRQAL-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDV 376
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK- 384
V +++D+Y KCG+++ + + F + +N +W +I G+ +AL LF M++
Sbjct: 377 FVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEY 436
Query: 385 ------------------------------AGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
V+P+ +TFV VLSAC++AGL+ +G +
Sbjct: 437 RVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYF 496
Query: 415 NTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
+M + IEP +EHY CMV LLGR G L +A LI+ + + +VW +LLGAC IH +
Sbjct: 497 TSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHND 556
Query: 475 VDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVE 534
++LG I+A+++ E+EP + HVLLSN+YA A RW++V R MK + + K PG S +E
Sbjct: 557 IELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIE 616
Query: 535 LRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIH 594
+G VH+F VGD HP+ I LE L++K ++ GY+ + V+ DV+ EEKE L +H
Sbjct: 617 SQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVH 676
Query: 595 SEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDG 636
SE+LA NLR+C DCH I+ ISKVV REIVVRD RFH+F++G
Sbjct: 677 SERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEG 736
Query: 637 LCSCGDYW 644
LCSCGDYW
Sbjct: 737 LCSCGDYW 744
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 238/475 (50%), Gaps = 37/475 (7%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTR---STFPCAIKSCSALHDLHSGKQAHQQ 98
N+ + +R G SV++ + ++P+ + A++ C + GK H +
Sbjct: 5 NNFLIQFSRRGFSVQSAKLTQEFVG-HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCE 63
Query: 99 AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR 158
G D+F + L++MY K L DA KLFDE+P+ RN +S+ +++ GY ++
Sbjct: 64 ILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPE--RNTISFVTLIQGYAESVRFL 121
Query: 159 EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG 218
EA+ LF E E N FV ++L + G H + K G
Sbjct: 122 EAIELFVRLHREGHEL--------NPFV----FTTILKLLVSTDCGELGWGIHACIFKLG 169
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
+S VG LIDAY+ G VDV+R+VFDG++ KD V+W ++ +A+N EAL +F
Sbjct: 170 HESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFS 229
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
QM + K N T ++V A L +GK +H +K E + VG +++D+Y K
Sbjct: 230 QM-RMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKS 288
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G +D AR+AF ++ +K+V W+ MIA Y +++EA+++F++M +A V PN TF SVL
Sbjct: 289 GDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVL 348
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMK 454
AC+ EG + N + H I+ G+ ++D+ + G+++ + +L
Sbjct: 349 QACA----TMEGLNLGNQI-HCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESP 403
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI-YANAGR 508
+ D V W ++ I +V LG+ +K L N Y V + + Y++A R
Sbjct: 404 HRND-VTWNTV-----IVGHVQLGD--GEKALRLFLNMLEYRVQATEVTYSSALR 450
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/434 (46%), Positives = 281/434 (64%), Gaps = 19/434 (4%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
++ YA+ G +D +R +FDGM E+D V WN +I Y QNG+ EAL +F +M+K+ K
Sbjct: 130 MLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKA-KAKP 188
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
N VT+ +VL A LG L G+ +H + ++ +V VGT+++DMY KCG ++ AR F
Sbjct: 189 NEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVF 248
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
+++ +K+V +W +MI GY MH ++EAL LF M + G+ P ITF+ +LSAC H+G V
Sbjct: 249 DKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVT 308
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
EGW N M E+ IEP +EHYGCMV+LLGRAG +++AY+L++ M ++ D V+WG+LLGA
Sbjct: 309 EGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA 368
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTP 528
CR+H + LGE + L + N G ++LLSNIYA G W+ V R R++MK+ + K P
Sbjct: 369 CRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEP 428
Query: 529 GFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKE 588
G S +E+ KVH FL G HP+ ++IY LEE+N L+ GY V+HD+ + EKE
Sbjct: 429 GCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKE 488
Query: 589 MTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRF 630
+L +HSEKLA NLRVC DCH V +LISK+ R+IVVRD RF
Sbjct: 489 RSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRF 548
Query: 631 HYFKDGLCSCGDYW 644
H+F +G CSCGDYW
Sbjct: 549 HHFVNGSCSCGDYW 562
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 153/356 (42%), Gaps = 60/356 (16%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+VF W ++I A GD V A + F +M + SL + C
Sbjct: 92 SVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTC------------------ 133
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Y+K GEL AR LFD + +R + V W M+ GY QN
Sbjct: 134 ---------------------YAKHGELDAARVLFDGMEER--DGVCWNVMIDGYTQNGM 170
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EAL+LF+ L +++ + V + SVLSAC ++ H ++
Sbjct: 171 PNEALVLFRRMLKAKAK------------PNEVTVLSVLSACGQLGALESGRWVHSYIEN 218
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G V VG L+D Y++ G ++ +R VFD + +KD V WNS+I YA +G + EAL +
Sbjct: 219 NGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQL 278
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESVIVGTSIIDMY 335
F M + N +T +L A H G + G I +++ + +E + ++++
Sbjct: 279 FKSMCRMGLHPTN-ITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLL 337
Query: 336 CKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+ G V+ A + M E + W ++ CR + L K+++ V N
Sbjct: 338 GRAGHVEQAYELVKNMNIEPDPVLWGTLLGA----CRLHGKIALGEKIVELLVDQN 389
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 160/358 (44%), Gaps = 24/358 (6%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S++++++ KH LF+ +++ V WN +I + G EAL F M K
Sbjct: 126 SLTAMLTCYAKHGELDAARVLFDGMEERDGV-CWNVMIDGYTQNGMPNEALVLFRRMLKA 184
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
P T + +C L L SG+ H G +V V +AL+DMYSKCG L DA
Sbjct: 185 KAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDA 244
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R +FD+I +++V+W SM+ GY + ++EAL LFK S C ++ F+
Sbjct: 245 RLVFDKIDD--KDVVAWNSMIVGYAMHGFSQEALQLFK------SMCRMGLHPTNITFI- 295
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRK 244
+LSAC VTEG F + G + ++ +++ R GHV+ + +
Sbjct: 296 -----GILSACGH--SGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYE 348
Query: 245 VFDGM-IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA-VTLSAVLLAIAH 302
+ M IE D V W +++ +G A + + +V + LS + A+ +
Sbjct: 349 LVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGN 408
Query: 303 L-GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
GV RL + D +K + S I + + + G RK M E+ + W
Sbjct: 409 WDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEE-INGW 465
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 115/265 (43%), Gaps = 48/265 (18%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H + + G D + L +YA G +D S +F W +II +A G
Sbjct: 50 HAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDV 109
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
A +FD M E+S++ T+
Sbjct: 110 VSAQQLFDTMP----------------------------------------EKSLVSLTA 129
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ Y K G++D AR F+ M+E++ W MI GY + EAL LF +M+KA +PN
Sbjct: 130 MLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPN 189
Query: 391 YITFVSVLSACSHAGLVQEG-W--HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+T +SVLSAC G ++ G W ++ G +FN+ G +VD+ + G L++A
Sbjct: 190 EVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGT----ALVDMYSKCGSLEDAR 245
Query: 448 DLIEGMKVKADFVVWGSLLGACRIH 472
+ + + K D V W S++ +H
Sbjct: 246 LVFDKIDDK-DVVAWNSMIVGYAMH 269
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/647 (38%), Positives = 352/647 (54%), Gaps = 48/647 (7%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC--S 84
+F +N+V SWN++IA A+ G A + M++ P + TF A+K+ S
Sbjct: 289 AVFEAMAVRNHV-SWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSS 347
Query: 85 ALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
+ DL H G DV V +AL+ MY G + AR FD IP + NIVSW
Sbjct: 348 SSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAK--NIVSW 405
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
+MLT Y N AREA+ LF A+ ++ + V+ +VL C V+
Sbjct: 406 NAMLTAYGDNGRAREAMELF------------AAMKRQSLAPNKVSYLAVLGCCEDVSE- 452
Query: 205 GVTEGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
H V+ G F E + N ++ +AR G ++ + FD + KD+V+WN+ +A
Sbjct: 453 --ARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAA 510
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV-IKMDLE 322
+ A+ F M + + + TL +V+ A LG L LG+ I Q+ +++E
Sbjct: 511 LSAREDLHGAITAFYTM-QHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVE 569
Query: 323 ESVIVGTSIIDMYCKCGQ-VDLARKAFNQMKE--KNVRSWTAMIAGYGMHCRAREALDLF 379
V+V +++++M KCG VD + F +M + K++ +W MIA Y H R+AL LF
Sbjct: 570 RDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLF 629
Query: 380 YKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP-GVEHYGCMVDLL 437
M ++ VRP+ TFVSVLS CSHAGLV++G H IE VEHY C+VD+L
Sbjct: 630 RIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVL 689
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GR G L+EA D I M + AD VVW SLLGAC + +++ GE AA+ EL ++ +V
Sbjct: 690 GRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYV 749
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAK-TPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
+LSNIYA AGRWED R R M RR+ K PG S + ++ +VH F D+ HPQ ++IY
Sbjct: 750 VLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIY 809
Query: 557 EYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------------- 599
LE L ++E GYV D V+HDV++E+KE L HSEKLA
Sbjct: 810 AELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVI 869
Query: 600 -NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF-KDGLCSCGDYW 644
NLRVC DCHT + I++V REI VRD RFH+F KDG CSCGDYW
Sbjct: 870 KNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 223/487 (45%), Gaps = 34/487 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKL---SLTPTRSTFPCAIKSCSALHDLHSGK 93
++ WN+ I +A G+ RA +R++ L P R++F + SC L +
Sbjct: 196 DLICWNAAI--MACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLAR 253
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H + GF DV V++AL+ MY +CG + ++ +F+ + +RN VSW +M+ + Q
Sbjct: 254 SIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMA--VRNHVSWNAMIAAFAQ 311
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN-GVTEGAHG 212
+ A ++ E G N + ++ +ACS + + G + HG
Sbjct: 312 CGHRSAAFAIYWRMQQE-----GFRPNKITF------VTALKAACSSSSQDLGESAALHG 360
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++ G + +V VG L+ Y G +D +R FD + K+ V+WN+++ Y NG A E
Sbjct: 361 WIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRARE 420
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL--EESVIVGTS 330
A+++F M K + N V+ AVL + R IH +V+ L +ES I
Sbjct: 421 AMELFAAM-KRQSLAPNKVSYLAVLGCCEDVSEAR---SIHAEVVGNGLFAQESSI-ANG 475
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ M+ + G ++ A AF+ K+ SW +A A+ FY M G RP+
Sbjct: 476 VVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPD 535
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG-KLKEAYDL 449
T VSV+ C+ G ++ G + +E V +++++ + G + E L
Sbjct: 536 KFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERL 595
Query: 450 IEGMK-VKADFVVWGSLLGACRIH----KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
M + D V W +++ A H K + L I ++ + P++ + +LS +
Sbjct: 596 FARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQR-SSVRPDSSTFVSVLSGC-S 653
Query: 505 NAGRWED 511
+AG ED
Sbjct: 654 HAGLVED 660
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 196/455 (43%), Gaps = 35/455 (7%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
T ++ C DL G+Q H+Q G R+ + + L+ MYSKC L DA F +
Sbjct: 26 TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
R R I +W +++ + L+ LEE +EN N + ++
Sbjct: 86 --RSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEER-----AENRPNRLTIIAVLGAI 135
Query: 195 LSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK 252
S + + + H + + ++ V L+DAY + G V+ + +VF +
Sbjct: 136 ASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVP 195
Query: 253 DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI 312
D + WN+ I A N + + + + + N + A+L + L L + I
Sbjct: 196 DLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSI 255
Query: 313 HDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
H +V ++ V+V T+++ MY +CG VD + F M +N SW AMIA +
Sbjct: 256 HARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHR 315
Query: 373 REALDLFYKMIKAGVRPNYITFVSVL-SACSHA----GLVQEGWHWLNTMGHEFNIEPGV 427
A ++++M + G RPN ITFV+ L +ACS + G W+ G E ++ G
Sbjct: 316 SAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGT 375
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA----CRIHKNVDLGEIAAK 483
+V + G G + A + + K + V W ++L A R + ++L AA
Sbjct: 376 ----ALVTMYGSTGAIDRARAAFDAIPAK-NIVSWNAMLTAYGDNGRAREAMEL--FAAM 428
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSL 518
K L PN Y +L G EDV RS+
Sbjct: 429 KRQSLAPNKVSYLAVL-------GCCEDVSEARSI 456
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/616 (36%), Positives = 344/616 (55%), Gaps = 66/616 (10%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+++C+ GK+ H G + +S+ LI+MY KCG + DA LF+++P R
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHR-- 67
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+ +SW S+LT Q + L +F D + D A ++ AC+
Sbjct: 68 DPISWASILTANNQANLPHLTLSMFPAMF-----------KQDGLQPDHYVFACLVKACA 116
Query: 200 RVTVNGVTEGAHG-FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ + H F++ D +V V ++L+D YA+ G D+ R VFD + K++++W
Sbjct: 117 ILGAMKQGKQVHATFIVSPVSDDDV-VKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWT 175
Query: 259 SIIAIYAQNGLAAEALDVFDQMV--------------------------------KSTDV 286
++I+ YAQ+G +A+ +F +M K D+
Sbjct: 176 AMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDI 235
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+ LS+++ A A+L VL LGK IH VI + E S+ V +++DMY KC V A+K
Sbjct: 236 -VDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKK 294
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F +M ++++ SWT++I G H A EAL L+ +M+ G++PN +TFV ++ ACSH GL
Sbjct: 295 IFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGL 354
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V +G ++ N+M ++ I P ++HY C++DLL R+G L+EA +LI+ M K D W +LL
Sbjct: 355 VSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALL 414
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
AC H+N +G A L L+P + ++LLSNIYA+A WE V + R LM + K
Sbjct: 415 SACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKK 474
Query: 527 TPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
PG+S + L + FL G+ HP E+I+ LEEL+ ++++ GY+ D +SV+HD++Q+E
Sbjct: 475 EPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQE 534
Query: 587 KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSK 628
KE L HSE+LA NLRVCGDCHTV++ IS +V REIVVRD+
Sbjct: 535 KERQLFWHSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDAN 594
Query: 629 RFHYFKDGLCSCGDYW 644
R+H+FKDG CSC ++W
Sbjct: 595 RYHHFKDGKCSCNNFW 610
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 186/365 (50%), Gaps = 27/365 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-SLTPTRSTFPCAIKSCSAL 86
LFN+ ++ + SW S++ + L F +M K L P F C +K+C+ L
Sbjct: 60 LFNQLPHRDPI-SWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAIL 118
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ GKQ H + D V S+L+DMY+KCG R +FD I +N +SWT+
Sbjct: 119 GAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISS--KNSISWTA 176
Query: 147 MLTGYVQNDNAREALLLF-----KEFLLEESECGGASENSDNV---------------FV 186
M++GY Q+ +A+ LF K L + G ++ + V V
Sbjct: 177 MISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIV 236
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D ++S++ A + + V G+ + H VI G++S + V N L+D YA+ V ++K+F
Sbjct: 237 DPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIF 296
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
M+++D V+W SII AQ+GLA EAL ++++M+ ST +K N VT ++ A +H+G++
Sbjct: 297 GRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRML-STGLKPNEVTFVGLIYACSHVGLV 355
Query: 307 RLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIA 364
G+ + +IK + S+ T ++D+ + G ++ A M K + +W A+++
Sbjct: 356 SKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLS 415
Query: 365 GYGMH 369
H
Sbjct: 416 ACNHH 420
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/665 (34%), Positives = 369/665 (55%), Gaps = 77/665 (11%)
Query: 3 LSKSSSVSS--VVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
LS SS +++ + S+ + S N +L +FN + KN +F++N++I L A+
Sbjct: 109 LSSSSLITTQLISSSSLRKSINHSLA-VFNHHKPKN-LFTFNALIRGLTTNSHFFNAIFH 166
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F M + + P R T+P +KS + L G H G D FV +L+DMY K
Sbjct: 167 FRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVK 226
Query: 121 CGELSDARKLFDEIPQRIRNIVS---WTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
+L A K+FDE P+R + S W ++ G + + ++A+ LFK A
Sbjct: 227 VEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFK-----------A 275
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
+NV +TLID +A+ G
Sbjct: 276 MPKKENV----------------------------------------SWSTLIDGFAKNG 295
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
+D + ++FD M EK+ V+W +++ +++NG + +AL +F +M++ V+ NA T+ + L
Sbjct: 296 DMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEE-GVRPNAFTIVSAL 354
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A A +G L G IH + L + +GT+++DMY KCG ++ A + F + ++K++R
Sbjct: 355 SACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIR 414
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
+WT MI G+ +H + +A+ F +M+ AG++P+ + F+++L+AC H+G V G ++ ++M
Sbjct: 415 TWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSM 474
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
++ IEP ++HY +VD+LGR+G+LKEA IE M + DFV+WG+L ACR HK +
Sbjct: 475 RLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKM 534
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG 537
+ A KL +LEP + G ++ LSN YA G+WED ER R LM+NR + K G+S +E+ G
Sbjct: 535 AKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEG 594
Query: 538 KVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
+VH F+ GD +H + I LEE+ + GY+ V+H+++QEEKE L H EK
Sbjct: 595 QVHRFVSGDHDHKDSKAICLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEK 654
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA NL+VCGDCH++++ SK+ REI++RD KRFH+FKDG CS
Sbjct: 655 LALAFALICTSPGMTIRIVKNLQVCGDCHSLMKYASKISQREIMLRDMKRFHHFKDGSCS 714
Query: 640 CGDYW 644
C D+W
Sbjct: 715 CRDHW 719
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 151/363 (41%), Gaps = 64/363 (17%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M ++ S S+++ K+ LF++ +KN V SW +++ +R GDS +AL
Sbjct: 276 MPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKN-VVSWTTMVDGFSRNGDSEKALSM 334
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
FS M + + P T A+ +C+ + L +G + H+ G H + +AL+DMY+K
Sbjct: 335 FSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAK 394
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
CG + A ++F E Q ++I +WT M+ G+ + ++ +A+ FK+ +
Sbjct: 395 CGNIESASEVFGETEQ--KSIRTWTVMIWGWAIHGHSEQAIACFKQMMFA---------- 442
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+ D V ++L+AC G VD
Sbjct: 443 --GIKPDEVVFLALLTAC-----------------------------------MHSGQVD 465
Query: 241 VSRKVFDGM-----IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
+ FD M IE + I+ + ++G EAL ++M + D V A
Sbjct: 466 IGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDF----VIWGA 521
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII--DMYCKCGQVDLARKAFNQMKE 353
+ A ++ K ++++K+ E G I + Y GQ + A + M+
Sbjct: 522 LFCACRAHKKTKMAKFALNKLLKL---EPTHTGNYIFLSNAYAALGQWEDAERVRVLMQN 578
Query: 354 KNV 356
+ V
Sbjct: 579 RGV 581
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 137/368 (37%), Gaps = 101/368 (27%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +I S + LI + + ++ S VF+ K+ T+N++I N
Sbjct: 101 HAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHF 160
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
A+ F M++S +K + +T VL ++A L LG IH +++ +E V S
Sbjct: 161 FNAIFHFRLMLRS-GIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVS 219
Query: 331 IIDMY------------------------------------CKCGQVDLARKAFNQMKEK 354
++DMY CK G + A K F M +K
Sbjct: 220 LVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKK 279
Query: 355 NVRSW-------------------------------TAMIAGYGMHCRAREALDLFYKMI 383
SW T M+ G+ + + +AL +F KM+
Sbjct: 280 ENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKML 339
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQ-----------EGWHWLNTMGHEF--------NIE 424
+ GVRPN T VS LSAC+ G ++ G H +G NIE
Sbjct: 340 EEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIE 399
Query: 425 PGVEHYG---------CMVDLLGRA--GKLKEAYDLIEGMK---VKADFVVWGSLLGACR 470
E +G V + G A G ++A + M +K D VV+ +LL AC
Sbjct: 400 SASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACM 459
Query: 471 IHKNVDLG 478
VD+G
Sbjct: 460 HSGQVDIG 467
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
IH Q+I +L S ++ T +I ++ + FN K KN+ ++ A+I G +
Sbjct: 100 IHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSH 159
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
A+ F M+++G++P+ +T+ VL S AGL L H + G+E
Sbjct: 160 FFNAIFHFRLMLRSGIKPDRLTYPFVLK--SMAGLFSTE---LGMAIHCMILRCGIELDS 214
Query: 432 ----CMVDLLGRAGKLKEAYDLIEGMKVKAD----FVVWGSLLGACRIHKNVDLGEI-AA 482
+VD+ + KL A+ + + + D ++W L+ C G + A
Sbjct: 215 FVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGC-----CKAGSMKKA 269
Query: 483 KKLFELEPN--NCGYHVLLSNIYANAGRWEDVERTRSL 518
KLF+ P N + L+ N D++R L
Sbjct: 270 VKLFKAMPKKENVSWSTLIDGFAKNG----DMDRAMEL 303
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/647 (38%), Positives = 351/647 (54%), Gaps = 48/647 (7%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC--S 84
+F +N+V SWN++IA A+ G A + M++ P + TF A+K+ S
Sbjct: 293 AVFEAMAVRNHV-SWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSS 351
Query: 85 ALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
+ DL H G DV V +AL+ MY G + AR FD IP + NIVSW
Sbjct: 352 SSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAK--NIVSW 409
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
+MLT Y N AREA+ LF A+ ++ + V+ +VL C V+
Sbjct: 410 NAMLTAYGDNGRAREAMELF------------AAMKRQSLAPNKVSYLAVLGCCEDVSE- 456
Query: 205 GVTEGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
H V+ G F E + N ++ +AR G ++ + FD + KD+V+WN+ +A
Sbjct: 457 --ARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAA 514
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV-IKMDLE 322
+ A+ F M + + + TL +V+ A LG L LG+ I Q+ +++E
Sbjct: 515 LSAREDLHGAITAFYTM-QHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVE 573
Query: 323 ESVIVGTSIIDMYCKCGQ-VDLARKAFNQMKE--KNVRSWTAMIAGYGMHCRAREALDLF 379
V+V +++++M KCG VD + F +M + K++ +W MIA Y H R+AL LF
Sbjct: 574 RDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLF 633
Query: 380 YKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP-GVEHYGCMVDLL 437
M ++ VRP+ TFVSVLS CSHAGLV++G H IE VEHY C+VD+L
Sbjct: 634 RIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVL 693
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GR G L+EA D I M + AD VVW SLLGAC + +++ GE AA+ EL ++ +V
Sbjct: 694 GRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYV 753
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAK-TPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
+LSNIYA AGRWED R R M RR+ K PG S + ++ +VH F D+ HPQ + IY
Sbjct: 754 VLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIY 813
Query: 557 EYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------------- 599
LE L ++E GYV D V+HDV++E+KE L HSEKLA
Sbjct: 814 AELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVI 873
Query: 600 -NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF-KDGLCSCGDYW 644
NLRVC DCHT + I++V REI VRD RFH+F KDG CSCGDYW
Sbjct: 874 KNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 223/487 (45%), Gaps = 34/487 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKL---SLTPTRSTFPCAIKSCSALHDLHSGK 93
++ WN+ I +A G+ RA +R++ L P R++F + SC L +
Sbjct: 200 DLICWNAAI--MACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLAR 257
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H + GF DV V++AL+ MY +CG + ++ +F+ + +RN VSW +M+ + Q
Sbjct: 258 SIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMA--VRNHVSWNAMIAAFAQ 315
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN-GVTEGAHG 212
+ A ++ E G N + ++ +ACS + + G + HG
Sbjct: 316 CGHRSAAFAIYWRMQQE-----GFRPNKITF------VTALKAACSSSSQDLGESAALHG 364
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++ G + +V VG L+ Y G +D +R FD + K+ V+WN+++ Y NG A E
Sbjct: 365 WIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRARE 424
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL--EESVIVGTS 330
A+++F M K + N V+ AVL + R IH +V+ L +ES I
Sbjct: 425 AMELFAAM-KRQSLAPNKVSYLAVLGCCEDVSEAR---SIHAEVVGNGLFAQESSI-ANG 479
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ M+ + G ++ A AF+ K+ SW +A A+ FY M G RP+
Sbjct: 480 VVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPD 539
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG-KLKEAYDL 449
T VSV+ C+ G ++ G + +E V +++++ + G + E L
Sbjct: 540 KFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERL 599
Query: 450 IEGMK-VKADFVVWGSLLGACRIH----KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
M + D V W +++ A H K + L I ++ + P++ + +LS +
Sbjct: 600 FARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQR-SSVRPDSSTFVSVLSGC-S 657
Query: 505 NAGRWED 511
+AG ED
Sbjct: 658 HAGLVED 664
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 195/459 (42%), Gaps = 39/459 (8%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
T ++ C DL G+Q H+Q G R+ + + L+ MYSKC L DA F +
Sbjct: 26 TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
R R I +W +++ + L+ LEE +EN N + ++
Sbjct: 86 --RSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEER-----AENRPNKLTIIAVLGAI 135
Query: 195 LSA------CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
S SR H + + ++ V L+DAY + G V+ + +VF
Sbjct: 136 ASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSR 195
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
+ D + WN+ I A N + + + + + N + A+L + L L
Sbjct: 196 IQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPL 255
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
+ IH +V ++ V+V T+++ MY +CG VD + F M +N SW AMIA +
Sbjct: 256 ARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQ 315
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVL-SACSHA----GLVQEGWHWLNTMGHEFNI 423
A ++++M + G RPN ITFV+ L +ACS + G W+ G E ++
Sbjct: 316 CGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDV 375
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC----RIHKNVDLGE 479
G +V + G G + A + + K + V W ++L A R + ++L
Sbjct: 376 MVGT----ALVTMYGSTGAIDRARAAFDAIPAK-NIVSWNAMLTAYGDNGRAREAMEL-- 428
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSL 518
AA K L PN Y +L G EDV RS+
Sbjct: 429 FAAMKRQSLAPNKVSYLAVL-------GCCEDVSEARSI 460
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/687 (34%), Positives = 362/687 (52%), Gaps = 79/687 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCS-ALHDLHS 91
V + +N++I + D A+ F M+ P T+ + + + D
Sbjct: 108 VSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQ 167
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE----LSDARKLFDEIPQRIRNIVSWTSM 147
Q H A G VS+AL+ +YS+C L ARK+FD+IP++ SWT+M
Sbjct: 168 CVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDER--SWTTM 225
Query: 148 LTGYVQN---DNARE---------ALLLFKEFLLEESECGGASEN--------SDNVFVD 187
+TGYV+N D +E L+ + + CG E S + +D
Sbjct: 226 MTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELD 285
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
SV+ AC+ + + + H +V++R D N+L+ Y + G + +R +F+
Sbjct: 286 EFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFDNSLVTLYYKCGKFNEARAIFE 344
Query: 248 GMIEKDAVTWNSIIAIY-------------------------------AQNGLAAEALDV 276
M KD V+WN++++ Y A+NG E L +
Sbjct: 345 KMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKL 404
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F M + C+ S + + A LG G+ H Q++K+ + S+ G ++I MY
Sbjct: 405 FSCMKREGFEPCD-YAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYA 463
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG V+ A++ F M + SW A+IA G H EA+D++ +M+K G+RP+ ITF++
Sbjct: 464 KCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLT 523
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VL+ACSHAGLV +G + N+M + I PG +HY ++DLL R+GK EA +IE + K
Sbjct: 524 VLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFK 583
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
+W +LL CR+H N++LG IAA KLF L P + G ++LLSN+YA G+WE+V R R
Sbjct: 584 PTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVR 643
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
LM++R + K S +E+ +VH FLV D HP+ E +Y+YL++L +++ +GYV D +
Sbjct: 644 KLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTS 703
Query: 577 SVIHDVDQE-EKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
V+HDV+ + KE L HSEK+A NLR CGDCH R +SKV
Sbjct: 704 FVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKV 763
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
V R+I++RD KRFH+F++G CSCG++W
Sbjct: 764 VQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 185/375 (49%), Gaps = 54/375 (14%)
Query: 31 KYVDKN-NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDL 89
K +D+N + ++N++I+ G EAL M + T+P I++C+ L
Sbjct: 243 KGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLL 302
Query: 90 HSGKQAHQQAFI-----FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
GKQ H A++ F FH D ++L+ +Y KCG+ ++AR +F+++P + ++VSW
Sbjct: 303 QLGKQVH--AYVLRREDFSFHFD----NSLVTLYYKCGKFNEARAIFEKMPAK--DLVSW 354
Query: 145 TSMLTGYVQNDNAREALLLFKEFL-------------LEESECGGAS------------E 179
++L+GYV + + EA L+FKE L E+ G E
Sbjct: 355 NALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
D F ++ +VL A NG + H ++K GFDS + GN LI YA+ G V
Sbjct: 415 PCDYAFSGAIKSCAVLGA----YCNG--QQFHAQLVKIGFDSSLSAGNALITMYAKCGVV 468
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
+ +++VF M D+V+WN++IA Q+G EA+DV+++M+K ++ + +T VL A
Sbjct: 469 EEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKK-GIRPDRITFLTVLTA 527
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTS----IIDMYCKCGQVDLARKAFNQMKEKN 355
+H G++ G+ + M+ + G +ID+ C+ G+ A + K
Sbjct: 528 CSHAGLVDQGRKYFNS---METVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKP 584
Query: 356 VRS-WTAMIAGYGMH 369
W A+++G +H
Sbjct: 585 TAEIWEALLSGCRVH 599
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 204/492 (41%), Gaps = 105/492 (21%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L + H FGF + + LID+Y K EL AR+LFDEI + + ++ T+M+
Sbjct: 30 LQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDK--IARTTMV 87
Query: 149 TGYVQNDNAREALLLFKE-------FLLEESECGGASENSD-----NVFV---------D 187
+GY + + A +F+E ++ + G S N+D N+F D
Sbjct: 88 SGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147
Query: 188 SVAIASVLSACSRVTVN-GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH----VDVS 242
ASVL+ + V + H +K G V N L+ Y+R + +
Sbjct: 148 DFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSA 207
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQN--------------------------------GLA 270
RKVFD + EKD +W +++ Y +N GL
Sbjct: 208 RKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLY 267
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EAL++ +MV S+ ++ + T +V+ A A+ +L+LGK +H V++ + + S S
Sbjct: 268 QEALEMVRRMV-SSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFDNS 325
Query: 331 IIDMYCKCGQVDLARK-------------------------------AFNQMKEKNVRSW 359
++ +Y KCG+ + AR F +MKEKN+ SW
Sbjct: 326 LVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSW 385
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW---LNT 416
MI+G + E L LF M + G P F + +C+ G G + L
Sbjct: 386 MIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVK 445
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH---- 472
+G + ++ G ++ + + G ++EA + M D V W +L+ A H
Sbjct: 446 IGFDSSLSAG----NALITMYAKCGVVEEAQQVFRTMPC-LDSVSWNALIAALGQHGHGV 500
Query: 473 KNVDLGEIAAKK 484
+ VD+ E KK
Sbjct: 501 EAVDVYEEMLKK 512
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 146/347 (42%), Gaps = 68/347 (19%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
L K + + N+ SW +I+ LA G E L+ FS M++ P F AIKSC+ L
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+G+Q H Q GF + +ALI MY+KCG + +A+++F +P + VSW ++
Sbjct: 432 AYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMP--CLDSVSWNAL 489
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Q+ + EA+ +++E L + D + +VL+ACS
Sbjct: 490 IAALGQHGHGVEAVDVYEEML------------KKGIRPDRITFLTVLTACS-------- 529
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-----IEKDAVTWNSIIA 262
G VD RK F+ M I A + +I
Sbjct: 530 ---------------------------HAGLVDQGRKYFNSMETVYRIPPGADHYARLID 562
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
+ ++G +EA + +++S K A A+L G + LG D++ + E
Sbjct: 563 LLCRSGKFSEA----ESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618
Query: 323 ESVIVGTSII--DMYCKCGQVDLARKAFNQMKEKNVR-----SWTAM 362
GT ++ +MY GQ + + M+++ V+ SW M
Sbjct: 619 HD---GTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEM 662
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/664 (37%), Positives = 372/664 (56%), Gaps = 46/664 (6%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S ++++S K S LF++ ++V S+N++IA AR GD+ A + F MR+
Sbjct: 76 SFNTLISAYAKESYVEVAHQLFDEMPQPDSV-SYNTLIAAYARRGDTQPAFQLFLEMREA 134
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
L T I +C ++ +Q H + + G V V +ALI YSK G L +A
Sbjct: 135 FLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEA 192
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R++F + + R+ VSW SM+ Y+Q+ +AL L+ E + + VD
Sbjct: 193 RRIFHWLSED-RDEVSWNSMVVAYMQHREGSKALELYLEMTVR------------GLIVD 239
Query: 188 SVAIASVLSACSRVT--VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR-GGHVDVSRK 244
+ASVL+A + V + G+ H +IK G+ VG+ LID Y++ GG + RK
Sbjct: 240 IFTLASVLTAFTNVQDLLGGLQ--FHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRK 297
Query: 245 VFDGMIEKDAVTWNSIIAIYA-QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VFD + D V WN++I+ Y+ L+ EAL+ F Q+ + + + +L V+ A +++
Sbjct: 298 VFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQL-QGVGHRPDDCSLVCVISACSNM 356
Query: 304 GVLRLGKCIHDQVIKMDLEESVI-VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
G+ +H +K+D+ + I V ++I MY KCG + A+ F+ M E N S+ +M
Sbjct: 357 SSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSM 416
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
IAGY H ++L LF +M++ P ITF+SVL+AC+H G V++G + N M +F
Sbjct: 417 IAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFG 476
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
IEP H+ CM+DLLGRAGKL EA LIE + F W +LLGACRIH NV+L AA
Sbjct: 477 IEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAA 536
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
+L +L+P N +V+L+NIY++ GR +D R LM++R + K PG S +E+ ++H F
Sbjct: 537 NRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIF 596
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVD----QEEKEMTLRIHSEKL 598
+ D HP +KI EYLEE+ K+++VGY ++ S D Q E+E+ L HSEKL
Sbjct: 597 VAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKL 656
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLR+C DCH I+ IS+VV REI VRDS RFH FKDG CSC
Sbjct: 657 AVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSC 716
Query: 641 GDYW 644
G YW
Sbjct: 717 GGYW 720
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 233/474 (49%), Gaps = 35/474 (7%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
+F +K+C A DL +GK H ++S+ + +YSKC LS AR++FD
Sbjct: 10 SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF----------LLEESECGGASENSDNV 184
N+ S+ ++++ Y + A LF E L+ G ++ + +
Sbjct: 70 HD--CNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQL 127
Query: 185 FV---------DSVAIASVLSACSRVTVN-GVTEGAHGFVIKRGFDSEVGVGNTLIDAYA 234
F+ D ++ +++AC +N G+ H + G DS V VGN LI +Y+
Sbjct: 128 FLEMREAFLDMDGFTLSGIITACG---INVGLIRQLHALSVVTGLDSYVSVGNALITSYS 184
Query: 235 RGGHVDVSRKVFDGMIE-KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ G + +R++F + E +D V+WNS++ Y Q+ ++AL+++ +M + + TL
Sbjct: 185 KNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLI-VDIFTL 243
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL-ARKAFNQMK 352
++VL A ++ L G H ++IK ++ VG+ +ID+Y KCG L RK F+++
Sbjct: 244 ASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEIS 303
Query: 353 EKNVRSWTAMIAGYGMHCR-AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
++ W MI+GY ++ + EAL+ F ++ G RP+ + V V+SACS+ +G
Sbjct: 304 NPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQG- 362
Query: 412 HWLNTMGHEFNIEPG-VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
++ + + +I + ++ + + G L++A L + M + + V + S++
Sbjct: 363 RQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTVSYNSMIAGYA 421
Query: 471 IHKNVDLGEIAAKKLFELE--PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNR 522
H +++ E++ P N + +L+ A+ GR ED + ++MK +
Sbjct: 422 QHGMGFQSLHLFQRMLEMDFTPTNITFISVLAAC-AHTGRVEDGKIYFNMMKQK 474
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/587 (38%), Positives = 335/587 (57%), Gaps = 41/587 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
I+ C+ L G++ H+ R F+S+ L+DMY KCG L +A+++FD + +
Sbjct: 48 IRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHK-- 105
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV----FVDSVAIASVL 195
N+ SWT ++ G+VQ+ EA+ LF E E D V F+DS A L
Sbjct: 106 NVFSWTMLMAGFVQSGRGVEAIQLFHRMCQE-------GELPDRVALLKFIDSCGAAKAL 158
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
S + H G DS++ N +I+ Y + G + + VF M EK+ +
Sbjct: 159 SQGREI---------HSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVI 209
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+W+++IA + QN LA EAL +F ++++ ++ + +T +VL A +G L LGK +H +
Sbjct: 210 SWSTMIAAFCQNELADEAL-LFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVR 268
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
++ L+ S++VG ++++MY KCG D AR F+ M EKNV SW AM+A YG + R+REA
Sbjct: 269 IVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREA 328
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
L LF M GVRPN ITFV++L CSH+G ++ M +F I P H+GC++D
Sbjct: 329 LALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLID 388
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY 495
+LGR+GKL+EA +LI+ M V AD V+W SLL AC HK+ D AA++ F+ EP
Sbjct: 389 MLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAA 448
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
+++LSN+YA +W++ + R M+ + K G S +E+ +VH F+ GD HP +I
Sbjct: 449 YIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRI 508
Query: 556 YEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------- 599
++ L+ L +++ GY D VIH +++EEK+ L HSEKLA
Sbjct: 509 FKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCI 568
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH+ I+ IS V R I VRDS RFH+F G CSCGDYW
Sbjct: 569 VKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 170/338 (50%), Gaps = 21/338 (6%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
NVFSW ++A + G VEA++ F M + P R I SC A L G++
Sbjct: 105 KNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREI 164
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H A G D+ ++A+I+MY KCG + +A +F +P+ +N++SW++M+ + QN+
Sbjct: 165 HSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPE--KNVISWSTMIAAFCQNE 222
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
A EALL FK E E +D + SVL A + V + + H ++
Sbjct: 223 LADEALLFFKLMQQEGME------------LDRITYVSVLDAYTSVGALELGKALHVRIV 270
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
G D+ + VGNTL++ Y + G D +R VFD M+EK+ V+WN+++A Y QNG + EAL
Sbjct: 271 YAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALA 330
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL---EESVIVGTSII 332
+FD M V+ N +T +L +H G + H ++ D V G +I
Sbjct: 331 LFDSM-DLEGVRPNDITFVTILYCCSHSGKFK-DAVSHFVEMRQDFGITPREVHFGC-LI 387
Query: 333 DMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
DM + G+++ A + M + WT+++ H
Sbjct: 388 DMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTH 425
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 114/241 (47%), Gaps = 25/241 (10%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+F + +KN V SW+++IA + + EAL F M++ + R T+ + + +++
Sbjct: 198 AVFTRMPEKN-VISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSV 256
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L GK H + G + V + L++MY KCG DAR +FD + + +N+VSW +
Sbjct: 257 GALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVE--KNVVSWNA 314
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS-----RV 201
ML Y QN +REAL LF LE V + + ++L CS +
Sbjct: 315 MLAAYGQNGRSREALALFDSMDLE------------GVRPNDITFVTILYCCSHSGKFKD 362
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSI 260
V+ E F I EV G LID R G ++ + ++ M + DAV W S+
Sbjct: 363 AVSHFVEMRQDFGIT---PREVHFG-CLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSL 418
Query: 261 I 261
+
Sbjct: 419 L 419
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 97/197 (49%), Gaps = 6/197 (3%)
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA+D+ +Q + L ++ A L G+ IH + L+ + +
Sbjct: 27 EAVDLLEQ----SGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLL 82
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+DMY KCG + A++ F+ M+ KNV SWT ++AG+ R EA+ LF++M + G P+
Sbjct: 83 VDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDR 142
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+ + + +C A + +G +++ ++ + ++++ G+ G + EA+ +
Sbjct: 143 VALLKFIDSCGAAKALSQGRE-IHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFT 201
Query: 452 GMKVKADFVVWGSLLGA 468
M K + + W +++ A
Sbjct: 202 RMPEK-NVISWSTMIAA 217
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/571 (39%), Positives = 330/571 (57%), Gaps = 65/571 (11%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L+ A+ +F + ++ + S++ + EAL L+ L
Sbjct: 116 LAYAKTIFHHLQNPPPSL--YNSLIRALSSSKTPLEALPLYHTML------------QSG 161
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG------ 237
+ D + V+ AC+ +V H V+K GF+ + + ++LI YA G
Sbjct: 162 LKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAK 221
Query: 238 -----------------------HVDV--SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
HV++ +R VFD M+ +D ++WN++I YA G E
Sbjct: 222 QLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNE 281
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL +FDQM ++ VK T+ ++L A AHLG L G +H + +E + IVGT+++
Sbjct: 282 ALALFDQM-RAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALV 340
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG++ LA + FN M+ K+V +W +IAG +H +EA LF +M +AGV PN I
Sbjct: 341 DMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDI 400
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TFV++LSACSHAG+V EG L+ M + IEP VEHYGC++DLL RAG L+EA +LI
Sbjct: 401 TFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGT 460
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M ++ + G+LLG CRIH N +LGE+ K+L L+P + G ++LLSNIYA A +W+D
Sbjct: 461 MPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDA 520
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE-VGY 571
+ R+LMK ++K PG S++EL+G VH F+ GD HP+ KIYE L E++ +L+ +GY
Sbjct: 521 RKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGY 580
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
D +V+ D+++E+KE L +HSEKLA NLRVC DCH VI+L
Sbjct: 581 SADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKL 640
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
ISKV REI+VRD RFH+F+DG CSC D+W
Sbjct: 641 ISKVYGREIIVRDRNRFHHFEDGECSCLDFW 671
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 164/350 (46%), Gaps = 24/350 (6%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
+NS+I L+ +EAL + +M + L P T+P IK+C+ G H
Sbjct: 134 YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVV 193
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
GF D ++ S+LI +Y+ +L A++LF+ R++VSW +M+ GYV++ A
Sbjct: 194 KSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLC--SARDVVSWNAMIDGYVKHVEMGHA 251
Query: 161 LLLFKEFLLEE-----------SECGGASE--------NSDNVFVDSVAIASVLSACSRV 201
++F + + + CG +E + V + S+LSAC+ +
Sbjct: 252 RMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHL 311
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSII 261
H ++ + VG L+D YA+ G + ++ +VF+ M KD + WN+II
Sbjct: 312 GALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTII 371
Query: 262 AIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD-QVIKMD 320
A A +G EA +F +M K V+ N +T A+L A +H G++ G+ + D
Sbjct: 372 AGMAIHGNVKEAQQLFKEM-KEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYG 430
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+E V +ID+ + G ++ A + M E N + A++ G +H
Sbjct: 431 IEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIH 480
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 153/352 (43%), Gaps = 64/352 (18%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S ++++ KH + +F++ V ++ V SWN++I A G EAL F MR +
Sbjct: 234 SWNAMIDGYVKHVEMGHARMVFDRMVCRD-VISWNTMINGYAICGKPNEALALFDQMRAV 292
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
+ PT +T + +C+ L L G H + V +AL+DMY+KCG++S A
Sbjct: 293 GVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLA 352
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
++F+ + +++++W +++ G + N +EA LFKE E G E +D FV
Sbjct: 353 TQVFNAMES--KDVLAWNTIIAGMAIHGNVKEAQQLFKEM----KEAG--VEPNDITFV- 403
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
++LSACS G VD +K+ D
Sbjct: 404 -----AILSACS-----------------------------------HAGMVDEGQKLLD 423
Query: 248 GM-----IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
M IE + +I + A+ G EA+++ M ++ N L A+L
Sbjct: 424 CMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTM----PMEPNPSALGALLGGCRI 479
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSII--DMYCKCGQVDLARKAFNQMK 352
G LG+ + ++I + S G I+ ++Y + D ARK N MK
Sbjct: 480 HGNFELGEMVGKRLINLQPCHS---GRYILLSNIYAAAKKWDDARKVRNLMK 528
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/590 (36%), Positives = 340/590 (57%), Gaps = 36/590 (6%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
TF + + L D+ G+Q H F +VFVS+AL+D YSK + DARKLFDE+
Sbjct: 212 TFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEM 271
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
P++ + VS+ +++GY + + A LF+E + A++
Sbjct: 272 PEQ--DGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFD------------RKQFPFATM 317
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
LS S + H I DSE+ VGN+L+D YA+ G + + +F + + A
Sbjct: 318 LSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSA 377
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
V W ++I+ Y Q G E L +F++M + V + T +++L A A + L LGK +H
Sbjct: 378 VPWTAMISAYVQKGFYEEGLQLFNKM-RQASVIADQATFASLLRASASIASLSLGKQLHS 436
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
+IK +V G++++D+Y KCG + A + F +M ++N+ SW AMI+ Y + A
Sbjct: 437 FIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEA 496
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG-WHWLNTMGHEFNIEPGVEHYGCM 433
L F +M+ +G++P+ ++F+ VLSACSH+GLV+EG WH+ N+M + ++P EHY +
Sbjct: 497 TLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHF-NSMTQIYKLDPRREHYASV 555
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP-NN 492
VD+L R+G+ EA L+ M + D ++W S+L ACRIHKN +L AA +LF +E +
Sbjct: 556 VDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRD 615
Query: 493 CGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQH 552
+V +SNIYA AG+WE+V + M++R + K P +S VE++ + H F D+ HPQ
Sbjct: 616 AAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQI 675
Query: 553 EKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------- 599
E+I + ++ L ++E+GY D + +H+ D++ K +L+ HSE+LA
Sbjct: 676 EEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSP 735
Query: 600 -----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR C DCH I++ISK+V REI VRDS RFH+F+DG CSCGD+W
Sbjct: 736 ILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 192/393 (48%), Gaps = 31/393 (7%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTP-TRSTF 76
KH + + LF++ +++ V S+N +I+ A G + AF R+L T R F
Sbjct: 257 KHDSVIDARKLFDEMPEQDGV-SYNVIISGYAWDG---KHKYAFDLFRELQFTAFDRKQF 312
Query: 77 PCA--IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
P A + S D G+Q H Q + ++ V ++L+DMY+KCG+ +A +F +
Sbjct: 313 PFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNL 372
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
R+ V WT+M++ YVQ E L LF + +V D AS+
Sbjct: 373 TH--RSAVPWTAMISAYVQKGFYEEGLQLFNKM------------RQASVIADQATFASL 418
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
L A + + + + H F+IK GF S V G+ L+D YA+ G + + + F M +++
Sbjct: 419 LRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNI 478
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
V+WN++I+ YAQNG A L F +MV S ++ ++V+ VL A +H G++ G +
Sbjct: 479 VSWNAMISAYAQNGEAEATLKSFKEMVLS-GLQPDSVSFLGVLSACSHSGLVEEGLWHFN 537
Query: 315 ---QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHC 370
Q+ K+D S++DM C+ G+ + A K +M + + W++++ +H
Sbjct: 538 SMTQIYKLDPRREHYA--SVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHK 595
Query: 371 R---AREALDLFYKMIKAGVRPNYITFVSVLSA 400
AR A D + M + Y+ ++ +A
Sbjct: 596 NQELARRAADQLFNMEELRDAAPYVNMSNIYAA 628
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 165/371 (44%), Gaps = 66/371 (17%)
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
H++ ++ +I Y K G L +ARKLFD + +R V+WT ++ GY Q + +EA LF
Sbjct: 75 HKNTVSTNMMISGYVKSGNLGEARKLFDGMVER--TAVTWTILIGGYSQLNQFKEAFELF 132
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
++ CG D V ++LS C+ + +IK G+DS +
Sbjct: 133 ----VQMQRCGTEP--------DYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLI 180
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
VGNTL+D+Y + +D++ ++F M E D+ T+
Sbjct: 181 VGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTF--------------------------- 213
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+AVL A L + LG+ IH VIK + +V V +++D Y K V A
Sbjct: 214 ---------AAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDA 264
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
RK F++M E++ S+ +I+GY + + A DLF ++ F ++LS S+
Sbjct: 265 RKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNT 324
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHY-------GCMVDLLGRAGKLKEAYDLIEGMKVKA 457
W MG + + + V +VD+ + GK +EA + + ++
Sbjct: 325 ------LDW--EMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRS 376
Query: 458 DFVVWGSLLGA 468
V W +++ A
Sbjct: 377 A-VPWTAMISA 386
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 136/287 (47%), Gaps = 25/287 (8%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
W ++I+ + G E L+ F+ MR+ S+ ++TF +++ +++ L GKQ H
Sbjct: 379 PWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFI 438
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
GF +VF SAL+D+Y+KCG + DA + F E+P RNIVSW +M++ Y QN A
Sbjct: 439 IKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPD--RNIVSWNAMISAYAQNGEAEA 496
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF---VIK 216
L FKE +L + DSV+ VLSACS + V EG F
Sbjct: 497 TLKSFKEMVL------------SGLQPDSVSFLGVLSACSHSGL--VEEGLWHFNSMTQI 542
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII---AIYAQNGLAAE 272
D +++D R G + + K+ M I+ D + W+S++ I+ LA
Sbjct: 543 YKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARR 602
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL-GVLRLGKCIHDQVIK 318
A D M + D V +S + A V ++ K + D+ +K
Sbjct: 603 AADQLFNMEELRDA-APYVNMSNIYAAAGQWENVSKVHKAMRDRGVK 648
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/623 (38%), Positives = 360/623 (57%), Gaps = 35/623 (5%)
Query: 45 IADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD--LHSGKQAHQQAFIF 102
+A + G EAL F M + P R TF + + + + + G++ H+ A I
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 103 GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
G +V V +A+I MY KCG L DAR F+E+ + +N V+W +M+T Y + REAL
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEEL--QWKNSVTWNAMMTNYKLDGRDREALE 118
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG--FD 220
LF+E E S + D + + + ACS + H + + G
Sbjct: 119 LFREM----------CERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELH 168
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+V VG L++ Y++ G ++ +RKVFD + + D+V WN++IA YAQ+G +ALD++
Sbjct: 169 KDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRS 228
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M +TD+ T V+ A L L+ G+ IH +V + + +++V +++ MY KCG
Sbjct: 229 MHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCG 288
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+D A F+ MK K+ SW +I+ Y H + +AL L+ +M GV+P +TFV +LS
Sbjct: 289 CLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLS 348
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
ACSH GLV +G + M + I+P V H+GC++DLLGR G+L EA +++ M ++A+
Sbjct: 349 ACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANA 408
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
V W SLLGAC+ H ++ G AA ++ + P G +VLLSNIYA AGRW+DVE+ R +M
Sbjct: 409 VQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIM 468
Query: 520 KNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVI 579
R + K+PG S +E+ VH F+ GD+ HPQ E+IY L ++ +++ +GYV D +SV
Sbjct: 469 AARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVF 528
Query: 580 HDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDRE 621
HD+++EEKE L HSEKLA NLRVC DCHT + +S++ R+
Sbjct: 529 HDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRK 588
Query: 622 IVVRDSKRFHYFKDGLCSCGDYW 644
IVVRD+ RFH F++G CSC DYW
Sbjct: 589 IVVRDAARFHLFENGSCSCRDYW 611
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 179/369 (48%), Gaps = 26/369 (7%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM--RKL 67
++V+S K + F + KN+V +WN+++ + G EAL F M R
Sbjct: 70 TAVISMYGKCGRLDDARAAFEELQWKNSV-TWNAMMTNYKLDGRDREALELFREMCERSR 128
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFG--FHRDVFVSSALIDMYSKCGELS 125
S P + +F AI++CS L DL G++ H+ G H+DV V +AL++MYSKCG+L
Sbjct: 129 SARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLE 188
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
+ARK+FD I + + V W +M+ Y Q+ ++AL L++ ++ ++
Sbjct: 189 EARKVFDSI-RHDADSVCWNAMIAAYAQHGRGKQALDLYRSM-----------HDTTDLA 236
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+V+ C+ ++ H V FD+ + V N L+ Y + G +D + V
Sbjct: 237 PKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDV 296
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F M KD ++WN+II+ YA +G + +AL ++ +M VK VT +L A +H G+
Sbjct: 297 FHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEM-DLQGVKPTEVTFVGLLSACSHGGL 355
Query: 306 LRLGKCIHDQVIKMD----LEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWT 360
+ G D +M ++ SV IID+ + G++ A M + N W
Sbjct: 356 VADGL---DYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWM 412
Query: 361 AMIAGYGMH 369
+++ H
Sbjct: 413 SLLGACKTH 421
>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/647 (36%), Positives = 352/647 (54%), Gaps = 81/647 (12%)
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF---HRDVFVSSALIDM 117
F++++ L P R F ++SC+ L +GK+ H G + F+ +AL +
Sbjct: 8 FTTLQSL---PAR--FRSLLRSCARNSSLSTGKKLHAVILTSGLASSSPNTFLLNALHHL 62
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN-AREALLLFKEFLLEESECGG 176
Y+ CG S AR LF +IP+ +++ WT++LT VQ+ E FKE
Sbjct: 63 YASCGVTSSARHLFYQIPRSHKDVTDWTTLLTSLVQHGTKPSEGFFFFKEM--------- 113
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
+ V +D VA+ SV C+RV G+ A G ++K G V V N +++ Y +
Sbjct: 114 ---RKEGVVLDDVAMISVFVLCTRVEDLGMGRQAQGCLVKMGLGLGVKVCNAIMNMYVKC 170
Query: 237 GHVDVSRKVF-------------------------------DGMIEKDAVTWNSIIAIYA 265
G V+ R+VF D M E++ V W +IA Y
Sbjct: 171 GLVEEVRRVFCEMNERNVVSWSTLLEGVVKWEGVENGRVVFDEMPERNEVGWTIMIAGYV 230
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEES 324
NG + E + D+MV + N VTLS++L A A G + +G+ +H +K M E
Sbjct: 231 GNGFSREGFLLLDEMVLRFRLGLNFVTLSSILSACAQSGDVLMGRWVHVYALKGMGREMH 290
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
++VGT+++DMY KCG +D+A K F + ++NV +W AM+ G MH R + LD+F KMI+
Sbjct: 291 IMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVAWNAMLGGLAMHGRGKFVLDIFPKMIE 350
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
+P+ +TF++VLSACSH+GLV +G+H+ ++ E+ P +EHY CMVD+LGRAG L+
Sbjct: 351 EA-KPDDLTFMAVLSACSHSGLVDQGYHYFRSLESEYGTTPKIEHYACMVDILGRAGHLE 409
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
EA LI+ M + + VV GSLLG+C H + LGE ++L +++ +N YHVLLSN+Y
Sbjct: 410 EAVMLIKKMPMCPNEVVLGSLLGSCNAHGKLQLGERILQELIQMDGHNTEYHVLLSNMYV 469
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
G+ + R ++K++ + K PG S + + G +H F GDK HP ++IY L +
Sbjct: 470 LEGKQDKANSLRQILKSKGIRKVPGVSSIYVGGNIHQFSAGDKSHPLTKEIYHALNNMIQ 529
Query: 565 KLQEVGYVTDMTSVIHD---------VDQEEKEMTLRIHSEKLA---------------- 599
+L+ GYV + T+ + + EEKE L +HSEKLA
Sbjct: 530 RLRLAGYVPNTTNQVFPGSDGREGSSEEMEEKEQALFLHSEKLAVCFGHISTKPGAPLYI 589
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH+ I+++SK+ +REIV+RD RFH FK G CSC DYW
Sbjct: 590 FKNLRICQDCHSAIKIVSKIYNREIVIRDRNRFHCFKHGSCSCSDYW 636
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/669 (33%), Positives = 360/669 (53%), Gaps = 62/669 (9%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKS 82
++ LF +++ V S+N++I + G +++ + ++ R+ S+ PTR T I
Sbjct: 97 DMERLFASMPERDAV-SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMV 155
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI---- 138
SAL D G H Q GF FV S L+DMY+K G + DAR++F E+ +
Sbjct: 156 ASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMY 215
Query: 139 -------------------------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
R+ ++WT+M+TG QN EAL +F+
Sbjct: 216 NTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRM------ 269
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY 233
++ V +D S+L+AC + + H ++ + ++ V VG+ L+D Y
Sbjct: 270 ------RAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMY 323
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
++ + ++ VF M ++ ++W ++I Y QN + EA+ F +M + +K + TL
Sbjct: 324 SKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM-QMDGIKPDDFTL 382
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
+V+ + A+L L G H + L + V +++ +Y KCG ++ A + F++M
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
+ SWTA++ GY +A+E +DLF KM+ G++P+ +TF+ VLSACS AGLV++G +
Sbjct: 443 HDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDY 502
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
++M + I P +HY CM+DL R+G+ KEA + I+ M D W +LL +CR+
Sbjct: 503 FDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
N+++G+ AA+ L E +P N +VLL +++A G+W +V R M++R++ K PG S +
Sbjct: 563 NMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWI 622
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
+ + KVH F D+ HP +IYE LE LN K+ E GY D++SV+HDV +K +
Sbjct: 623 KYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISH 682
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSEKLA NLRVC DCH + ISK+ R+I+VRD+ RFH F D
Sbjct: 683 HSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSD 742
Query: 636 GLCSCGDYW 644
G CSCGD+W
Sbjct: 743 GTCSCGDFW 751
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 204/423 (48%), Gaps = 82/423 (19%)
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIP-----------------------QRI------ 138
F+ + L+ Y+K G L+ AR++FDE+P +R+
Sbjct: 48 TFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPE 107
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
R+ VS+ +++TG+ + ++ L++ L EES V + +++++
Sbjct: 108 RDAVSYNALITGFSSTGSPARSVQLYRALLREES-----------VRPTRITLSAMIMVA 156
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG---------- 248
S ++ + H V++ GF + VG+ L+D YA+ G + +R+VF
Sbjct: 157 SALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYN 216
Query: 249 ---------------------MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
M+++D++TW +++ QNGL EALDVF +M ++ V
Sbjct: 217 TLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRM-RAEGVG 275
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
+ T ++L A L L GK IH + + E++V VG++++DMY KC + LA
Sbjct: 276 IDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F +M +N+ SWTAMI GYG + + EA+ F +M G++P+ T SV+S+C++ +
Sbjct: 336 FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASL 395
Query: 408 QEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWG 463
+EG + H + G+ Y +V L G+ G +++A+ L + M D V W
Sbjct: 396 EEGAQF-----HCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWT 449
Query: 464 SLL 466
+L+
Sbjct: 450 ALV 452
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 258/660 (39%), Positives = 358/660 (54%), Gaps = 78/660 (11%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQ 98
+WNS+++ + A+ F M + P + C L G+Q H
Sbjct: 197 TWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGF 256
Query: 99 AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR 158
G DVFV +AL+DMY+KCG++ DA K+F+ + R +++V+W +M+TGY QN
Sbjct: 257 CVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERM--RFKDVVTWNAMVTGYSQNGRFE 314
Query: 159 EALLLFKEFLLEESEC---------------GGASENSDNVF---------VDSVAIASV 194
+AL LF + E+ E G E D VF + V + S+
Sbjct: 315 DALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMD-VFRQMCGCRCRPNVVTLMSL 373
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSE-------VGVGNTLIDAYARGGHVDVSRKVFD 247
LSAC+ V + H + +K E + V N LID YA+ ++V+R +FD
Sbjct: 374 LSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFD 433
Query: 248 GMIEKD--AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD-VKCNAVTLSAVLLAIAHLG 304
+ KD VTW +I YAQ+G A AL +F +M K + + N T+S VL+A A L
Sbjct: 434 EICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLA 493
Query: 305 VLRLGKCIHDQVIKMDLEES--VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
L+ GK IH V++ +S + V +IDMY K G VD A+ F+ M ++N SWT++
Sbjct: 494 ALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSL 553
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
+ GYGMH R+ +A +F +M K + + ITF+ VL ACSH+G+ +F
Sbjct: 554 LTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM-------------DFG 600
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
++PGVEHY CMVDLLGRAG+L EA LI M ++ VVW +LL ACRIH N +L E AA
Sbjct: 601 VDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAA 660
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
KKL EL+ +N G + LLSNIYANA RW+DV R LMK + K PG+S V+ R + F
Sbjct: 661 KKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETF 720
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
VGD+ H Q +KIYE L +L +++ +HDVD EEK L HSEKLA
Sbjct: 721 YVGDRTHLQSQKIYETLADLIKRIKA-------NFSLHDVDDEEKGDQLSEHSEKLALAY 773
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGD H+ I IS +V+ EI++RDS RFH FK+G CSC YW
Sbjct: 774 AILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 833
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 243/520 (46%), Gaps = 63/520 (12%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKN--NVFSWNSVIADLARGGDSVEALRA 60
L+ ++V++++ ++ TN L K V + +V+ WN +I ALR
Sbjct: 54 LNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRL 113
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
F M+ L TP TFP K+C + + G H GF +VFV +A+I MY K
Sbjct: 114 FRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGK 173
Query: 121 CGELSDARKLFDEIPQR-IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
C + ARK+FDE+ R I + V+W S+++ Y A+ LF+E +
Sbjct: 174 CKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTV---------- 223
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
+ D+V + ++L C + + HGF ++ G +V VGN L+D YA+ G +
Sbjct: 224 -GYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKM 282
Query: 240 DVSRKVFDGM-----------------------------------IEKDAVTWNSIIAIY 264
+ + KVF+ M IE D VTW+S+I+ Y
Sbjct: 283 EDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGY 342
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE-- 322
AQ G EA+DVF QM + N VTL ++L A A +G L GK H +K L+
Sbjct: 343 AQRGFGCEAMDVFRQMC-GCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGE 401
Query: 323 -----ESVIVGTSIIDMYCKCGQVDLARKAFNQM--KEKNVRSWTAMIAGYGMHCRAREA 375
+ + V ++IDMY KC +++AR F+++ K+++V +WT MI GY H A A
Sbjct: 402 HNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHA 461
Query: 376 LDLFYKMIKAG--VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG-C 432
L LF +M K + PN T VL AC+ ++ G + I+ V C
Sbjct: 462 LQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANC 521
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++D+ ++G + A + + M K + V W SLL +H
Sbjct: 522 LIDMYSKSGDVDTAQVVFDSMS-KRNAVSWTSLLTGYGMH 560
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 191/383 (49%), Gaps = 38/383 (9%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDK---NNVFSWNSVIADLARGGDSVEA 57
M+ + +++V+ ++ + +LF K ++ ++V +W+SVI+ A+ G EA
Sbjct: 292 MRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEA 351
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIF---GFHR----DVFV 110
+ F M P T + +C+++ L GK+ H + F G H D+ V
Sbjct: 352 MDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAV 411
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+ALIDMY+KC L AR +FDEI + R++V+WT M+ GY Q+ +A AL LF E
Sbjct: 412 INALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMF-- 469
Query: 171 ESECGGASENSDNVFV-DSVAIASVLSACSRVTVNGVTEGAHGFVIKRG-FDSEV-GVGN 227
DN V + I+ VL AC+R+ + H +V++R DS+V V N
Sbjct: 470 ---------KIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVAN 520
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
LID Y++ G VD ++ VFD M +++AV+W S++ Y +G + +A VFD+M K V
Sbjct: 521 CLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALV- 579
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
+ +T VL A +H G + ++ V ++D+ + G++ A +
Sbjct: 580 LDGITFLVVLYACSHSG------------MDFGVDPGVEHYACMVDLLGRAGRLGEAMRL 627
Query: 348 FNQMK-EKNVRSWTAMIAGYGMH 369
N M E W A+++ +H
Sbjct: 628 INDMPIEPTPVVWIALLSACRIH 650
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 159/323 (49%), Gaps = 17/323 (5%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVS-SALIDMYSKCGELSDARKLFDE-IPQRIRNIVSWTS 146
L K HQQ I G + + + + LI Y +++A L ++ + ++ W
Sbjct: 37 LTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQ 96
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ + ++ AL LF+ + + D V AC ++ +
Sbjct: 97 LIRHALHFNSPNTALRLFRRM------------KTLHWTPDHYTFPFVFKACGEISNFEL 144
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK---DAVTWNSIIAI 263
HG VI+ GF+S V V N +I Y + V +RKVFD + + D+VTWNSI+++
Sbjct: 145 GASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSV 204
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y+ + A+ +F +M + + V + +L +LG+ G+ +H ++ L E
Sbjct: 205 YSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVE 264
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
V VG +++DMY KCG+++ A K F +M+ K+V +W AM+ GY + R +AL LF KM
Sbjct: 265 DVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMR 324
Query: 384 KAGVRPNYITFVSVLSACSHAGL 406
+ + + +T+ SV+S + G
Sbjct: 325 EEKIESDVVTWSSVISGYAQRGF 347
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 13/156 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K N SW S++ G S +A R F MRK +L TF + +CS HSG
Sbjct: 542 MSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACS-----HSG 596
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
FG V + ++D+ + G L +A +L +++P +V W ++L+
Sbjct: 597 MD-------FGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVV-WIALLSACR 648
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
+ N A K+ L +++ G N++ ++
Sbjct: 649 IHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANA 684
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/546 (38%), Positives = 320/546 (58%), Gaps = 34/546 (6%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY KCG +SDAR +FD++P R ++VSWT ++ GY QN EA+ L + L G
Sbjct: 1 MYCKCGAVSDARHVFDKMPSR--DVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNG 58
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
+ F + CS + E H +K +D +V VG+ L+D YAR
Sbjct: 59 FT------FTSLLKATGACGGCS------IGEQMHALAVKYNWDEDVYVGSALLDMYARC 106
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
+D++ VFD ++ K+ V+WN++IA +A+ L F +M ++ T S++
Sbjct: 107 EQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRN-GFGATHFTYSSM 165
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
A A +G L G+ +H +IK + + VG +++ MY K G + ARK F++M ++++
Sbjct: 166 FSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDL 225
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+W M+ + +EA+ F ++ K G++ N ITF+SVL+ACSH GLV+EG H+ +
Sbjct: 226 VTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDM 285
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M ++N++P ++HY VDLLGRAG LKEA + M ++ VWG+LLGACR+HKN
Sbjct: 286 M-KDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK 344
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
+G+ AA +FEL+P++ G VLL NIYA+ G+W D R R +MK + K P S V++
Sbjct: 345 MGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIE 404
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
VH F+ D HP+ IY EE+N+++++ GYV + V+ ++++E+E L+ HSE
Sbjct: 405 NSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSE 464
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
K+A N+R+CGDCH+ + +SKV REIVVRD+ RFH+F +G C
Sbjct: 465 KIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSC 524
Query: 639 SCGDYW 644
SCGDYW
Sbjct: 525 SCGDYW 530
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 168/347 (48%), Gaps = 17/347 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K + +V SW +IA A+ EA+ M + P TF +K+ A
Sbjct: 14 VFDK-MPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 72
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+Q H A + + DV+V SAL+DMY++C ++ A +FD + +N VSW ++
Sbjct: 73 GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVS--KNEVSWNAL 130
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + + L+ F E + GA+ +S+ SA +R+
Sbjct: 131 IAGFARKADGETTLMKFAEM---QRNGFGATH---------FTYSSMFSAFARIGALEQG 178
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H +IK G VGNT++ YA+ G + +RKVFD M ++D VTWN+++ AQ
Sbjct: 179 RWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQY 238
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL EA+ F++ ++ ++ N +T +VL A +H G+++ GK D + +++ +
Sbjct: 239 GLGKEAVAHFEE-IRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDH 297
Query: 328 GTSIIDMYCKCGQVDLARK-AFNQMKEKNVRSWTAMIAGYGMHCRAR 373
S +D+ + G + A F E W A++ MH A+
Sbjct: 298 YVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK 344
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/576 (38%), Positives = 339/576 (58%), Gaps = 38/576 (6%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMY--SKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
KQAH + SS LI S G+L+ ARKLF ++ I + +M+ G
Sbjct: 28 KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICN--TMIRG 85
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y ++ N EA+ L+ F++E V VD+ VL+AC+R+ +
Sbjct: 86 YARSQNPYEAVSLYY-FMVERG-----------VPVDNYTYPFVLAACARLGAVKLGRRF 133
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H V+K GF S++ V N LI Y G + VFD +D VTWN +I + GL+
Sbjct: 134 HCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLS 193
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD---QVIKMDLEESVIV 327
+A D+ D+M K +++ + VT+ +++ A A LG L GK +H ++ K ++ +++
Sbjct: 194 EKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVL 253
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
T+++DMY KCG +DLA + F +M+ +NV +W A+I G MH +A+ LF +M +
Sbjct: 254 ETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKL 313
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ +TF+++L ACSHAGLV EG M ++F IEP +EHYGC+VDLL RA K+ +A
Sbjct: 314 MPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDAL 373
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
IE M +KA+ V+W +LLGACR + DL E +++ ELEP++CG +V+LSN+YA
Sbjct: 374 AFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVS 433
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+W+ + R MKN+ + KTPG S +EL G +H F+ GD+ H Q E+IY +EE+ ++
Sbjct: 434 QWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVN 493
Query: 568 -EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+ G+V +V+ D+++EEKE +L +HSEKLA NLRVC DCH
Sbjct: 494 LDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCH 553
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +++ SKV +REIV RD RFH+FK+G CSC D+W
Sbjct: 554 SFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 589
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 170/369 (46%), Gaps = 23/369 (6%)
Query: 19 HSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC 78
HS + N + + F N++I AR + EA+ + M + + T+P
Sbjct: 57 HSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPF 116
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
+ +C+ L + G++ H + GF D+FV +ALI Y CG A +FDE +
Sbjct: 117 VLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDE--STV 174
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
R++V+W M+ ++ + +A L E DN+ D V + S++ AC
Sbjct: 175 RDVVTWNIMINAHLNKGLSEKAFDLLDEM-----------TKLDNLRPDEVTMVSLVPAC 223
Query: 199 SRVTVNGVTEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
+++ + H + + K + ++ + L+D YA+ G +D++ +VF M ++
Sbjct: 224 AQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVF 283
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
TWN++I A +G +A+ +FDQM + + + VT A+L A +H G++ G +
Sbjct: 284 TWNALIGGLAMHGHGEDAISLFDQM-EHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQA 342
Query: 316 VI-KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCRAR 373
+ K +E + ++D+ C+ +VD A M K N W ++ CR+
Sbjct: 343 MKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGA----CRSG 398
Query: 374 EALDLFYKM 382
DL K+
Sbjct: 399 GHFDLAEKI 407
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/684 (33%), Positives = 371/684 (54%), Gaps = 63/684 (9%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK--L 67
+S++S + + ++ LF ++ V S+N+++A +R G A A+ ++ +
Sbjct: 81 NSLLSALARAGLVRDMERLFTSLPQRDAV-SYNALLAGFSRAGAHARAAGAYVALLRDEA 139
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
+ P+R T + SAL D G+Q H Q GF F S L+DMY+K G + DA
Sbjct: 140 GVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDA 199
Query: 128 RKLFDEIPQR-----------------------------IRNIVSWTSMLTGYVQNDNAR 158
R++FDE+ + R+ ++WT+M+TG QN
Sbjct: 200 RRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLES 259
Query: 159 EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG 218
EAL +F+ ++ V +D S+L+AC + + H ++ +
Sbjct: 260 EALDVFRRM------------RAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTC 307
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
++ V VG+ L+D Y++ V ++ VF M+ K+ ++W ++I Y QNG EA+ VF
Sbjct: 308 YEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFS 367
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
+M + +K + TL +V+ + A+L L G H + L V V +++ +Y KC
Sbjct: 368 EMQRD-GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKC 426
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G ++ A + F++M + SWTA++ GY +A+E +DLF KM+ GV+P+ +TF+ VL
Sbjct: 427 GSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVL 486
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
SACS +GLV +G + ++M + +I P +HY CM+DL R+G LK+A + I+ M D
Sbjct: 487 SACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPD 546
Query: 459 FVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSL 518
W +LL ACR+ ++++G+ AA+ L +L+P N +VLL +++A+ G W DV + R
Sbjct: 547 AFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRG 606
Query: 519 MKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSV 578
M++R++ K PG S ++ + KVH F D+ HP IYE L+ LN K+ E GY D++SV
Sbjct: 607 MRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSV 666
Query: 579 IHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
+HDV EK L HSEKLA NLRVC DCH + ISK+ R
Sbjct: 667 LHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGR 726
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
+I+VRD+ RFH F +G+CSCGD+W
Sbjct: 727 DILVRDAVRFHKFSNGICSCGDFW 750
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 195/394 (49%), Gaps = 50/394 (12%)
Query: 106 RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
R++ ++L+ ++ G + D +LF +PQ R+ VS+ ++L G+ + A +
Sbjct: 75 RNLVTGNSLLSALARAGLVRDMERLFTSLPQ--RDAVSYNALLAGFSRAGAHARAAGAYV 132
Query: 166 EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGV 225
L +E+ V + ++ V+ S + + H +++ GF +
Sbjct: 133 ALLRDEA----------GVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFT 182
Query: 226 GNTLIDAYARGGHVDVSRKVFDGM-------------------------------IEKDA 254
G+ L+D YA+ G + +R+VFD M E+D+
Sbjct: 183 GSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDS 242
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
+TW +++ QNGL +EALDVF +M ++ V + T ++L A L L GK IH
Sbjct: 243 ITWTTMVTGLTQNGLESEALDVFRRM-RAEGVGIDQYTFGSILTACGALAALEEGKQIHA 301
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
+ + E++V VG++++DMY KC V LA F +M KN+ SWTAMI GYG + E
Sbjct: 302 YITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEE 361
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGC 432
A+ +F +M + G++P+ T SV+S+C++ ++EG +H L + + P V
Sbjct: 362 AVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVS---GLRPYVTVSNA 418
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+V L G+ G +++A+ L + M D V W +L+
Sbjct: 419 LVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALV 451
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 116/231 (50%), Gaps = 36/231 (15%)
Query: 216 KRGFDSEVG----VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+R FD+ G GN+L+ A AR G V ++F + ++DAV++N+++A +++ G A
Sbjct: 66 RRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHA 125
Query: 272 EALDVFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
A + +++ V+ + +T+S V++ + LG LG+ +H Q++++ G+
Sbjct: 126 RAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSP 185
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVR-------------------------------SW 359
++DMY K G + AR+ F++M+ KNV +W
Sbjct: 186 LVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITW 245
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
T M+ G + EALD+F +M GV + TF S+L+AC ++EG
Sbjct: 246 TTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEG 296
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/563 (37%), Positives = 343/563 (60%), Gaps = 39/563 (6%)
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
+RD F+ L+ Y K G DA LFDE+P++ + VSW S+++G + E L +F
Sbjct: 77 YRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKK--DFVSWNSLVSGLAKIGQLGECLSVF 134
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSE 222
C S++ + ++ SV+SAC V+ EG H +K G E
Sbjct: 135 ---------CKMKSDSE--LKLNEFTFLSVISAC--VSEKACDEGYYVHCCAMKLGLVYE 181
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIE--KDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
V V N L++ Y + G V+ + ++F M E K V+WNSI+A+ AQNG+ EA + FD M
Sbjct: 182 VKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFD-M 240
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
++ + T+ ++L A + + R+ + +H + L+E++ + T+++++Y K G+
Sbjct: 241 MRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGR 300
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA-GVRPNYITFVSVLS 399
++ +RK F ++ + + +WTAM+AGY MH +EA++ F ++++ G+ P+++TF +LS
Sbjct: 301 LNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLS 360
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
ACSH+GLV+EG ++ M + ++P ++HY CMVDLLGR G L +A++LI+ M + +
Sbjct: 361 ACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNS 420
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
VWG+LLGACR+H+N+DLG+ AAK L L+P++ +++LSN+Y+ AG W D + R+LM
Sbjct: 421 GVWGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLM 480
Query: 520 KNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVI 579
KN+ L + G S +E K+H F+V D HP +I++ LEE+ K+Q+VG+V + S++
Sbjct: 481 KNKVLTRNQGCSFIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMKKIQDVGFVHETESIL 540
Query: 580 HDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDRE 621
HDVD+E K + HSEK+A NLR+C DCH ++ +S V R
Sbjct: 541 HDVDEEVKIDMITKHSEKIALAYGLLVTNADMPLVIIKNLRICRDCHNTVKFVSMVEKRT 600
Query: 622 IVVRDSKRFHYFKDGLCSCGDYW 644
I++RD+KRFH F GLCSCGDYW
Sbjct: 601 IIIRDTKRFHQFSGGLCSCGDYW 623
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 195/406 (48%), Gaps = 33/406 (8%)
Query: 12 VVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LT 70
+VS K + LF++ + K + SWNS+++ LA+ G E L F M+ S L
Sbjct: 86 LVSCYLKMGPTKDAYLLFDE-MPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELK 144
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
TF I +C + G H A G +V V +AL++MY K G + A +L
Sbjct: 145 LNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRL 204
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F E+P+ ++IVSW S++ QN EA F + + F D
Sbjct: 205 FSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRV------------NGFFPDDAT 252
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+ S+L AC + + E HG + G D + + TL++ Y++ G ++ SRKVF+ +
Sbjct: 253 MVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEIS 312
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+ D V W +++A YA +G EA++ F+++V+ ++ + VT + +L A +H G+++ GK
Sbjct: 313 KPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGK 372
Query: 311 C---IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGY 366
+ V K ++ + + ++D+ +CG +D A + M E N W A++
Sbjct: 373 YFFRVMSDVYK--VQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGA- 429
Query: 367 GMHCRAREALDLFYKMIK--AGVRP----NYITFVSVLSACSHAGL 406
CR +DL + K + P NYI ++ SA AGL
Sbjct: 430 ---CRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSA---AGL 469
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 280 MVKSTDVKCNAVT-------LSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSI 331
+ T ++ NA++ LS ++L + + + + IH VIK +D + I G +
Sbjct: 28 FLSQTSLQFNAISTHHFDPFLSTLILHLKSSSSVSICRIIHAHVIKSLDYRDGFI-GDQL 86
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK-AGVRPN 390
+ Y K G A F++M +K+ SW ++++G + E L +F KM + ++ N
Sbjct: 87 VSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLN 146
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
TF+SV+SAC EG+ +++ + + V+ +V++ G+ G ++ A+ L
Sbjct: 147 EFTFLSVISACVSEKACDEGY-YVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLF 205
Query: 451 EGM-KVKADFVVWGSLLGAC 469
M + + V W S++ C
Sbjct: 206 SEMPESEKSIVSWNSIVAVC 225
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/548 (39%), Positives = 328/548 (59%), Gaps = 15/548 (2%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K ++ +WN +I+ + G EA F M + P TF + S L G
Sbjct: 309 MPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQG 368
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H G DVF+ SALID+Y KC ++ ARK+FD+ + +IV T+M++GYV
Sbjct: 369 KEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQ--RTPVDIVVCTAMISGYV 426
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N AL +F+ L E +SV +ASVL AC+ + + + HG
Sbjct: 427 LNGMNNNALEIFRWLLQERMR------------ANSVTLASVLPACAGLAALTLGKELHG 474
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++K G VG+ ++D YA+ G +D++ + F G+ +KDAV WNS+I +QNG E
Sbjct: 475 HILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEE 534
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+D+F QM K + V++SA L A A+L L GK IH +++ + +++I
Sbjct: 535 AIDLFRQM-GMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALI 593
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG +DLA + F+ M+EKN SW ++IA YG H R +++L+LF+ M+ G++P+++
Sbjct: 594 DMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHV 653
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF++++SAC HAG V EG H+ M E I +EHY CMVDL GRAG+L EA+ +I
Sbjct: 654 TFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINS 713
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M D VWG+LLGACR+H NV+L E+A++ LF+L+P N GY+VLLSN++ANAG+WE V
Sbjct: 714 MPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESV 773
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+ RSLMK R + K PG S +++ H F+ D+ HPQ +IY L+ L ++L++ GYV
Sbjct: 774 LKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYV 833
Query: 573 TDMTSVIH 580
+ +H
Sbjct: 834 PQLYLPMH 841
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/461 (32%), Positives = 232/461 (50%), Gaps = 40/461 (8%)
Query: 25 LTTLFNKYVDKNNVF---------SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRST 75
+ L ++D N+F WN +I G AL + M P + T
Sbjct: 90 MYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYT 149
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
FP IK+C L+ + G+ H + GF DVFV S+LI YS+ G + DAR LFD +P
Sbjct: 150 FPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP 209
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
++ V W ML GYV+N + A +F E E+ +SV A VL
Sbjct: 210 S--KDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETN------------PNSVTFACVL 255
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
S C+ + HG V+ G + + V NTL+ YA+ GH+ +R++FD M + D V
Sbjct: 256 SVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLV 315
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
TWN +I+ Y QNG EA +F +M+ S +K +++T S+ L ++ LR GK IH
Sbjct: 316 TWNGMISGYVQNGFMDEASCLFHEMI-SARMKPDSITFSSFLPLLSEGATLRQGKEIHCY 374
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+I+ + V + +++ID+Y KC V++ARK F+Q ++ TAMI+GY ++ A
Sbjct: 375 IIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNA 434
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF------NIEPGVEH 429
L++F +++ +R N +T SVL AC AGL T+G E N G +
Sbjct: 435 LEIFRWLLQERMRANSVTLASVLPAC--AGLAAL------TLGKELHGHILKNGHGGSCY 486
Query: 430 YG-CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G ++D+ + G+L A+ G+ K D V W S++ +C
Sbjct: 487 VGSAIMDMYAKCGRLDLAHQTFIGISDK-DAVCWNSMITSC 526
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/443 (31%), Positives = 228/443 (51%), Gaps = 22/443 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ K+ V WN ++ + GD A F MR+ P TF C + C++
Sbjct: 204 LFDRMPSKDGVL-WNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEI 262
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ G Q H G D V++ L+ MY+KCG L DAR+LFD +P+ ++V+W M
Sbjct: 263 MINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPK--TDLVTWNGM 320
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GYVQN EA LF E + S + DS+ +S L S
Sbjct: 321 ISGYVQNGFMDEASCLFHEMI------------SARMKPDSITFSSFLPLLSEGATLRQG 368
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H ++I+ G +V + + LID Y + V+++RK+FD D V ++I+ Y N
Sbjct: 369 KEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLN 428
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G+ AL++F +++ ++ N+VTL++VL A A L L LGK +H ++K S V
Sbjct: 429 GMNNNALEIFRWLLQER-MRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYV 487
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G++I+DMY KCG++DLA + F + +K+ W +MI + + EA+DLF +M AG
Sbjct: 488 GSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGT 547
Query: 388 RPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
+ + ++ + LSAC++ + G H G F + E ++D+ + G L
Sbjct: 548 KYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFAE--SALIDMYSKCGNLDL 604
Query: 446 AYDLIEGMKVKADFVVWGSLLGA 468
A + + M+ K + V W S++ A
Sbjct: 605 ACRVFDTMEEKNE-VSWNSIIAA 626
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 15/331 (4%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+++C+ L G+QAH Q + G + + + L+ MY CG DA+ +F ++ R+
Sbjct: 53 LQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQL--RLW 110
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
W M+ G+ ALL + + L CG D V+ AC
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKML----GCG--------TLPDKYTFPYVIKACG 158
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ + H + GF+ +V VG++LI Y+ G + +R +FD M KD V WN
Sbjct: 159 GLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNV 218
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
++ Y +NG A VF +M + T+ N+VT + VL A ++ G +H V+
Sbjct: 219 MLNGYVKNGDWDNATGVFMEM-RRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS 277
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
LE V +++ MY KCG + AR+ F+ M + ++ +W MI+GY + EA LF
Sbjct: 278 GLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLF 337
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
++MI A ++P+ ITF S L S +++G
Sbjct: 338 HEMISARMKPDSITFSSFLPLLSEGATLRQG 368
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 10/216 (4%)
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
A L ++L L G+ H Q++ + + I+GT ++ MY CG A+ F
Sbjct: 46 APQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFY 105
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
Q++ W MI G+ M + AL ++KM+ G P+ TF V+ AC V
Sbjct: 106 QLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVAL 165
Query: 410 G---WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
G + MG E ++ G ++ G + +A L + M K D V+W +L
Sbjct: 166 GRVVHDKIQFMGFELDVFVGSS----LIKFYSENGCIHDARYLFDRMPSK-DGVLWNVML 220
Query: 467 GACRIHKNVD--LGEIAAKKLFELEPNNCGYHVLLS 500
+ + D G + E PN+ + +LS
Sbjct: 221 NGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLS 256
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/654 (35%), Positives = 352/654 (53%), Gaps = 75/654 (11%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N ++W+++IA L++ G +A + L P+R++ + + D
Sbjct: 289 NEYTWSTIIAALSQAGRIDDAFAVYQR-DPLKSVPSRTSMLTGLARYGRIDD-------- 339
Query: 97 QQAFIFGFHRDVFVS-SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
+ H VS +A+I Y + + +A LF+ +P RN +SW M+ GY +N
Sbjct: 340 AKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMP--FRNTISWAGMIAGYARNG 397
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+ +AL+ + + + ++ S ACS + + H +
Sbjct: 398 RSEQALVSLQAL------------HRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAV 445
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
K G V N LI Y + + R++FD M KD V++NS ++ QN L EA D
Sbjct: 446 KAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARD 505
Query: 276 VFDQMVKSTDVKCNAVTLSA------------------------------VLLAIA-HLG 304
VF+ M S DV +SA +LL ++ +LG
Sbjct: 506 VFNNM-PSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLG 564
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
+LG+ IH IK+ ++ ++V +++ MY KC D + K F+ M+E+++ +W +I
Sbjct: 565 APQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSMEERDIFTWNTIIT 623
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
GY H REA+ ++ M+ AGV PN +TFV +L ACSH+GLV EG + +M ++ +
Sbjct: 624 GYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLT 683
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
P +EHY CMVDLLGRAG ++ A I M ++ D V+W +LLGAC+IHKNV++G AA+K
Sbjct: 684 PLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEK 743
Query: 485 LFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLV 544
LF +EP+N G +V+LSNIY++ G W++V + R LMK R + K PG S ++++ K+H+F+
Sbjct: 744 LFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVT 803
Query: 545 GDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----- 599
GD+EH Q + IY L EL L+ GYV D V+HD+D+E+KE +L HSEKLA
Sbjct: 804 GDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGL 863
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
NLR+CGDCHT I+ +S V REI VRD RFH+F++G CSC
Sbjct: 864 LVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 208/452 (46%), Gaps = 41/452 (9%)
Query: 106 RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
RDV + ++ Y + +AR LF+ +P+R N VSWT M++GYV + A +F+
Sbjct: 155 RDVSSWNTMLTGYCHSQLMEEARNLFERMPER--NGVSWTVMISGYVLIEQHGRAWDMFR 212
Query: 166 EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGV 225
L C G + N + SVLSA + G+ E H V K GF+ +V V
Sbjct: 213 TML-----CEGMTPEQPN-------LVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVV 260
Query: 226 GNTLIDAYARG-GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
G +++ Y + +D + K F+GM ++ TW++IIA +Q G +A V+ +
Sbjct: 261 GTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQR----- 315
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
D + + +++L +A G + K + DQ+ E +V+ ++I Y + VD A
Sbjct: 316 DPLKSVPSRTSMLTGLARYGRIDDAKILFDQI----HEPNVVSWNAMITGYMQNEMVDEA 371
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
FN+M +N SW MIAGY + R+ +AL + + G+ P+ + S ACS+
Sbjct: 372 EDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNI 431
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVE--HYGC--MVDLLGRAGKLKEAYDLIEGMKVKADFV 460
++ G H ++ G + Y C ++ L G+ + + + M VK D V
Sbjct: 432 EALETG-----KQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVK-DTV 485
Query: 461 VWGSLLGACRIHKNVDLGEIAAKKLFE--LEPNNCGYHVLLSNIYANAGRWEDVERTRSL 518
+ S + A + D A+ +F P+ + ++S E VE RS+
Sbjct: 486 SYNSFMSALVQNNLFD----EARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSM 541
Query: 519 MKNRRLAKTPGFS-LVELRGKVHAFLVGDKEH 549
+ R L P + L+ L G + A +G + H
Sbjct: 542 LHERELPNPPILTILLGLSGNLGAPQLGQQIH 573
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 181/398 (45%), Gaps = 32/398 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LFN+ +N + SW +IA AR G S +AL + ++ + + P+ S+ + +CS +
Sbjct: 374 LFNRMPFRNTI-SWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIE 432
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L +GKQ H A G + +V +ALI +Y K + R++FD + +++ VS+ S
Sbjct: 433 ALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRM--TVKDTVSYNSF 490
Query: 148 LTGYVQNDNAREALLLFKEFLLEE--------SECGGASENSDNVFV-----------DS 188
++ VQN+ EA +F + S C A + ++ V + +
Sbjct: 491 MSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNP 550
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
+ +L + + + H IK G DS + V N L+ Y + D S KVFD
Sbjct: 551 PILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDS 609
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M E+D TWN+II YAQ+GL EA+ ++ MV S V N VT +L A +H G++
Sbjct: 610 MEERDIFTWNTIITGYAQHGLGREAIRMYQLMV-SAGVLPNEVTFVGLLHACSHSGLVDE 668
Query: 309 G-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGY 366
G + L + ++D+ + G V A M E + W+A++
Sbjct: 669 GHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGAC 728
Query: 367 GMHCRA----REALDLFYKMIKAGVRPNYITFVSVLSA 400
+H R A LF I+ NY+ ++ S+
Sbjct: 729 KIHKNVEIGRRAAEKLFS--IEPSNAGNYVMLSNIYSS 764
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 163/395 (41%), Gaps = 72/395 (18%)
Query: 112 SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
SA I + G L +AR++FD +P R+I++W SM+ Y
Sbjct: 37 SARIRELGRLGRLHEAREVFDSMP--FRDIIAWNSMIFAY-------------------- 74
Query: 172 SECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT--- 228
C ++ D+++ ++ + + ++G +R FD +GV NT
Sbjct: 75 --CNNGMPDAGRSLADAISGGNLRTGT--ILLSGYARAGRVRDARRVFDG-MGVRNTVAW 129
Query: 229 --LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
++ Y + G + ++RK+FD M +D +WN+++ Y + L EA ++F++M + V
Sbjct: 130 NAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGV 189
Query: 287 K-------------------------CNAVT-----LSAVLLAIAHLGVLRLGKCIHDQV 316
C +T L +VL A+ HLG + + IH V
Sbjct: 190 SWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLV 249
Query: 317 IKMDLEESVIVGTSIIDMYCK-CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
K E V+VGT+I++ Y K +D A K F M +N +W+ +IA R +A
Sbjct: 250 HKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDA 309
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
++ + V + S+L+ + G + + + + EP V + M+
Sbjct: 310 FAVYQRDPLKSVP----SRTSMLTGLARYGRIDDAKILFDQIH-----EPNVVSWNAMIT 360
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
+ + EA DL M + G + G R
Sbjct: 361 GYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYAR 395
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/626 (36%), Positives = 347/626 (55%), Gaps = 80/626 (12%)
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK-CGELS 125
+SL T ++F +++C DL S + ++ + R + ++ Y+K G++
Sbjct: 74 VSLNKTIASF---VRAC----DLESARNVFEKMSV----RTTVTWNTMLSGYTKVAGKVK 122
Query: 126 DARKLFDEIPQR-----------------------------IRNIVSWTSMLTGYVQNDN 156
+A +LFD+IP+ +++I SW ++++G+ QN
Sbjct: 123 EAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQ 182
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
++A LF ++ E + V+ ++++S +G E A
Sbjct: 183 MQKAFDLFS--VMPEK--------------NGVSWSAMISG---YVEHGDLEAAEELYKN 223
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G S V V ++ Y + G V+++ ++F M K+ VTWNS+IA Y +N A + L V
Sbjct: 224 VGMKSVV-VETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKV 282
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F M++S V+ N ++LS+VLL ++L L LG+ +H V K L + TS+I MYC
Sbjct: 283 FKTMIESR-VRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYC 341
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG +D A K F +M K+V +W AMI+GY H R+AL LF KM ++P++ITFV+
Sbjct: 342 KCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVA 401
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
V+ AC+HAG V G + +M EF IE HY C++DLLGRAG+L EA LI+ M
Sbjct: 402 VILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFT 461
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
++G+LLGACRIHKN+DL E AA+ L L+P + +V L+NIYA +W+ V + R
Sbjct: 462 PHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVR 521
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
+MK + K PG+S +E++ H F D+ HP+ I++ L EL+ K++ GYV D+
Sbjct: 522 KMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLE 581
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
+HDV++E KE L HSEKLA NLRVCGDCH I+ IS +
Sbjct: 582 FALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIE 641
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
REI+VRD+ RFH+F++G CSCGDYW
Sbjct: 642 KREIIVRDTTRFHHFRNGFCSCGDYW 667
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/630 (36%), Positives = 348/630 (55%), Gaps = 71/630 (11%)
Query: 54 SVEALRAFSSMRKLSLTPTRSTFPCAIKS-------CSALHDLHSGKQAHQQAFIFGFHR 106
S+ L ++++ L L P + P I S + L+ L G Q H + G
Sbjct: 45 SISPLTISATLQNL-LQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQP 103
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEI------PQRIRNIVSWTSM-----LTGYVQND 155
V S ++ Y+ G++ + +F+ I P +++ V S+ + G +
Sbjct: 104 TALVGSKMVAFYASSGDIDSSVSVFNGIGDYFTFPFVLKSSVELLSVWMGKCVHGLILRI 163
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+ L + ++ +CG ++ + VF D++ I V S
Sbjct: 164 GLQFDLYVATSLIILYGKCGEIND-AGKVF-DNMTIRDVSS------------------- 202
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
N L+ Y + G +D + +F+ M ++ V+W ++I+ Y+Q+GLA +AL
Sbjct: 203 ----------WNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALS 252
Query: 276 VFDQMVKS-TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+FD+MVK + V+ N VT+ +VL A A L L G+ IH+ +M L + V ++ M
Sbjct: 253 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 312
Query: 335 YCKCGQVDLARKAFNQMK--EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
Y KCG + AR F+++ EKN+ +W MI Y + +A+ F +MI+AG++P+ I
Sbjct: 313 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDI 372
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF +LS CSH+GLV G + N M ++I P VEHY C+ DLLGRAG+L EA L+
Sbjct: 373 TFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGE 432
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M + A +WGSLL ACR H+N+++ E AA+KLF LEP N G +VLLSN+YA AGRW++V
Sbjct: 433 MPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEV 492
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
++ R+++K++ K+PG S +E+ GK H FL GD HPQ ++IY +LE L K++ GY
Sbjct: 493 DKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYF 552
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D + V+HD+ +EEKE L HSEKLA NLR+CGDCHT + I
Sbjct: 553 PDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFI 612
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S++ RE++VRD RFH+FK G CSCGDYW
Sbjct: 613 SEIYGREVIVRDINRFHHFKGGCCSCGDYW 642
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRK--LSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
N+ SW ++I+ ++ G + +AL F M K + P T + +C+ L L G+Q
Sbjct: 230 NIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQ 289
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H+ A G + + V AL MY+KCG L DAR FD++ + +N+++W +M+T Y
Sbjct: 290 IHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASY 349
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+ +A+ F+E + + D + +LS CS
Sbjct: 350 GHGLQAVSTFREMI------------QAGIQPDDITFTGLLSGCS 382
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/631 (36%), Positives = 361/631 (57%), Gaps = 36/631 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + ++ +WNS+IA L + S EA+ + M ++ P T K+ S L
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 93 KQAHQQAFIFGFH-RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
+++H A I G +VFV SAL+DMY K G+ +A+ + D + ++ ++V T+++ GY
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK--DVVLITALIVGY 242
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
Q EA+ F+ L+E+ V + ASVL +C + G + H
Sbjct: 243 SQKGEDTEAVKAFQSMLVEK------------VQPNEYTYASVLISCGNLKDIGNGKLIH 290
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
G ++K GF+S + +L+ Y R VD S +VF + + V+W S+I+ QNG
Sbjct: 291 GLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREE 350
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
AL F +M++ + +K N+ TLS+ L ++L + G+ IH V K + G+ +
Sbjct: 351 MALIEFRKMMRDS-IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGL 409
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
ID+Y KCG D+AR F+ + E +V S MI Y + REALDLF +MI G++PN
Sbjct: 410 IDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPND 469
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+T +SVL AC+++ LV+EG ++ + I +HY CMVDLLGRAG+L+EA +++
Sbjct: 470 VTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLT 527
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
+ D V+W +LL AC++H+ V++ E +K+ E+EP + G +L+SN+YA+ G+W
Sbjct: 528 TEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNR 587
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK-EHPQHEKIYEYLEELNVKLQEVG 570
V +S MK+ +L K P S VE+ + H F+ GD HP E+I E LEEL K +++G
Sbjct: 588 VIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLG 647
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------NLRVCGDCHTVIRL 613
YV D + V D+++ KE +L HSEKLA NLRVC DCH+ I++
Sbjct: 648 YVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGSIRILKNLRVCVDCHSWIKI 707
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+S+V+ REI+ RDSKRFH+F+DG CSCGDYW
Sbjct: 708 VSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 190/375 (50%), Gaps = 19/375 (5%)
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
+LT T + F ++ C + K GF ++ S L+D KCG++ A
Sbjct: 61 TLTTTHN-FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYA 118
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R++FD + + R+IV+W S++ +++ ++EA+ +++ + ++NV D
Sbjct: 119 RQVFDGMSE--RHIVTWNSLIAYLIKHRRSKEAVEMYRLMI------------TNNVLPD 164
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD-SEVGVGNTLIDAYARGGHVDVSRKVF 246
++SV A S +++ + +HG + G + S V VG+ L+D Y + G ++ V
Sbjct: 165 EYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVL 224
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D + EKD V ++I Y+Q G EA+ F M+ V+ N T ++VL++ +L +
Sbjct: 225 DRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEK-VQPNEYTYASVLISCGNLKDI 283
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
GK IH ++K E ++ TS++ MY +C VD + + F ++ N SWT++I+G
Sbjct: 284 GNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGL 343
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ R AL F KM++ ++PN T S L CS+ + +EG ++ + ++ +
Sbjct: 344 VQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEG-RQIHGIVTKYGFDRD 402
Query: 427 VEHYGCMVDLLGRAG 441
++DL G+ G
Sbjct: 403 KYAGSGLIDLYGKCG 417
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 22/236 (9%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K ++ N SW S+I+ L + G AL F M + S+ P T A++ CS L
Sbjct: 326 KCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFE 385
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G+Q H +GF RD + S LID+Y KCG AR +FD + + +++S +M+
Sbjct: 386 EGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSE--VDVISLNTMIYS 443
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y QN REAL LF+ + + + + V + SVL AC+ + V EG
Sbjct: 444 YAQNGFGREALDLFERMI------------NLGLQPNDVTVLSVLLACNNSRL--VEEGC 489
Query: 211 HGFVIKRGFDSEVGVGN----TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
F R ++ + N ++D R G ++ + + +I D V W ++++
Sbjct: 490 ELFDSFR--KDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLS 543
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 90/180 (50%), Gaps = 11/180 (6%)
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
I G+ ++D KCG +D AR+ F+ M E+++ +W ++IA H R++EA++++ MI
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY-----GCMVDLLGRA 440
V P+ T SV A S L +E H + G+E +VD+ +
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQR-----SHGLAVILGLEVSNVFVGSALVDMYVKF 214
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE-LEPNNCGYHVLL 499
GK +EA +++ ++ K ++ ++G + ++ + + L E ++PN Y +L
Sbjct: 215 GKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 274
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/635 (34%), Positives = 349/635 (54%), Gaps = 35/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF + + +V SWN++IA A+ G EA+R + M + P+ TF + +CS L
Sbjct: 179 LFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLG 235
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G++ H G D+ + +AL+ MY++C L DA K+F +P+R ++VSW++M
Sbjct: 236 LLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRR--DVVSWSAM 293
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ + + D EA+ + + LE V + ASVL AC+ V
Sbjct: 294 IAAFAETDLFDEAIEFYSKMQLE------------GVRPNYYTFASVLLACASVGDLRAG 341
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H ++ G+ + G L+D Y G +D +R +FD + +D W +I Y++
Sbjct: 342 RAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ 401
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G L+++ +M +T V + S V+ A A LG + H + + ++
Sbjct: 402 GHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVL 461
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
TS+++MY + G ++ AR+ F++M ++ +WT +IAGY H AL L+ +M G
Sbjct: 462 ATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGA 521
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ +TF+ VL ACSHAGL ++G ++ ++ + P + HY C++DLL RAG+L +A
Sbjct: 522 EPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAE 581
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+LI M V+ + V W SLLGA RIHK+V AA ++ +L+P + +VLLSN++A G
Sbjct: 582 ELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTG 641
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+ R+ M R + K G S +E+ ++H F VGD HP+ ++I+ L+ L+ K++
Sbjct: 642 NLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIK 701
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E GYV + V+HDV ++EKE+ LR+HSEKLA LR+C DCH+
Sbjct: 702 EAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHS 761
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
++ IS + REI+VRDS RFH F+DG CSCGDYW
Sbjct: 762 AVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 238/471 (50%), Gaps = 26/471 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N +SW S++ A+ G AL + +++ L P + + +C+++ L G
Sbjct: 84 IARKNDYSWGSMLTAYAQNGHYRAALDLY---KRMDLQPNPVVYTTVLGACASIEALEEG 140
Query: 93 KQAHQQ-AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K H + + G DV + ++L+ MY+KCG L DA++LF+ + R R++ SW +M+ Y
Sbjct: 141 KAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGR-RSVSSWNAMIAAY 199
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
Q+ + EA+ L+++ +E S SVLSACS + + H
Sbjct: 200 AQSGHFEEAIRLYEDMDVEPS---------------VRTFTSVLSACSNLGLLDQGRKIH 244
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+ RG + ++ + N L+ YAR +D + K+F + +D V+W+++IA +A+ L
Sbjct: 245 ALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFD 304
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA++ + +M + V+ N T ++VLLA A +G LR G+ +HDQ++ + +++ GT++
Sbjct: 305 EAIEFYSKM-QLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTAL 363
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP-N 390
+D+Y G +D AR F+Q++ ++ WT +I GY L+L+ +M P
Sbjct: 364 VDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPAT 423
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
I + V+SAC+ G + + + + I V +V++ R G L+ A +
Sbjct: 424 KIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATS-LVNMYSRWGNLESARQVF 482
Query: 451 EGMKVKADFVVWGSLLGACRIH--KNVDLGEIAAKKLFELEPNNCGYHVLL 499
+ M + D + W +L+ H + LG +L EP+ + V+L
Sbjct: 483 DKMSSR-DTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVL 532
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 208/395 (52%), Gaps = 37/395 (9%)
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
A++ C DL S +Q H + I G +VF+ + ++ Y KCG ++ AR FD I +
Sbjct: 33 ALRQC---QDLESVRQIHDR--ISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIAR- 86
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+N SW SMLT Y QN + R AL L+K L+ + V +VL A
Sbjct: 87 -KNDYSWGSMLTAYAQNGHYRAALDLYKRMDLQP---------------NPVVYTTVLGA 130
Query: 198 CSRVTVNGVTEGAHGFVI-KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV- 255
C+ + + H + +G +V + N+L+ YA+ G ++ ++++F+ M + +V
Sbjct: 131 CASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVS 190
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+WN++IA YAQ+G EA+ +++ M DV+ + T ++VL A ++LG+L G+ IH
Sbjct: 191 SWNAMIAAYAQSGHFEEAIRLYEDM----DVEPSVRTFTSVLSACSNLGLLDQGRKIHAL 246
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+ E + + +++ MY +C +D A K F ++ ++V SW+AMIA + EA
Sbjct: 247 ISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEA 306
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM---GHEFNIEPGVEHYGC 432
++ + KM GVRPNY TF SVL AC+ G ++ G + + G++ + G
Sbjct: 307 IEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGT----A 362
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+VDL G L EA L + ++ + D +W L+G
Sbjct: 363 LVDLYTSYGSLDEARSLFDQIENR-DEGLWTVLIG 396
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 136/257 (52%), Gaps = 25/257 (9%)
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
+ V +GN ++ AY + G V +R FD + K+ +W S++ YAQNG ALD++ +M
Sbjct: 56 ANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM 115
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV-----IKMDLEESVIVGTSIIDMY 335
D++ N V + VL A A + L GK IH ++ +K+D VI+ S++ MY
Sbjct: 116 ----DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLD----VILENSLLTMY 167
Query: 336 CKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
KCG ++ A++ F +M ++V SW AMIA Y EA+ L+ M V P+ TF
Sbjct: 168 AKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTF 224
Query: 395 VSVLSACSHAGLVQEGWH---WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
SVLSACS+ GL+ +G +++ G E ++ ++ + R L +A + +
Sbjct: 225 TSVLSACSNLGLLDQGRKIHALISSRGTELDLSL----QNALLTMYARCKCLDDAAKIFQ 280
Query: 452 GMKVKADFVVWGSLLGA 468
+ + D V W +++ A
Sbjct: 281 RLP-RRDVVSWSAMIAA 296
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 4/157 (2%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
IHD+ I +V +G I+ Y KCG V AR AF+ + KN SW +M+ Y +
Sbjct: 46 IHDR-ISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGH 104
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
R ALDL+ +M ++PN + + +VL AC+ ++EG + + ++ V
Sbjct: 105 YRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILEN 161
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
++ + + G L++A L E M + W +++ A
Sbjct: 162 SLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAA 198
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/558 (37%), Positives = 320/558 (57%), Gaps = 39/558 (6%)
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
H D + L+ + CG++ A ++F +P +R++ SW +M++G +N EA +F
Sbjct: 69 HPDAVSYNTLLSCHFACGDIDGAWRVFSTMP--VRDVTSWNTMVSGLSKNGAIEEAEAMF 126
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
+ + S N V + A + + A + N + ++
Sbjct: 127 RAMPARNAV-------SWNAMVAARASSGDMGAAENLFRNAPEK------------TDAI 167
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+ ++ Y G+V + + F M ++ V+WN+++A Y +N A +AL VF MV+
Sbjct: 168 LWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDA 227
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
V+ N TLS+VLL ++L L G+ +H +K+ L S+ VGTS++ MYCKCG +D A
Sbjct: 228 IVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDA 287
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
K F++M K++ +W AMI+GY H R+A+ LF KM GV P++IT ++VL+AC H
Sbjct: 288 CKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHT 347
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGS 464
GL G TM +NIEP V+HY CMVDLL RAG L+ A ++I M + +G+
Sbjct: 348 GLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGT 407
Query: 465 LLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRL 524
LL ACR++KN++ E AA+KL E +P N G +V L+NIYA A RW+DV R R MK+ +
Sbjct: 408 LLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAV 467
Query: 525 AKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQ 584
KTPG+S +E++G H F D+ HPQ + I++ L+ L ++ +GY D+ +HDV++
Sbjct: 468 VKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDKLDRLGKLMKAMGYSPDLDFALHDVEE 527
Query: 585 EEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRD 626
K L HSEKLA NLR+CGDCH +LISK+ DREI++RD
Sbjct: 528 SLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRD 587
Query: 627 SKRFHYFKDGLCSCGDYW 644
+ RFH+F+ G CSCGDYW
Sbjct: 588 TTRFHHFRGGHCSCGDYW 605
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 15/163 (9%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSALHDLHSGKQA 95
N+ SWN+V+A + + +ALR F +M + ++ P ST + CS L L G+Q
Sbjct: 196 NLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQV 255
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
HQ R + V ++L+ MY KCG+L DA KLFDE+ ++IV+W +M++GY Q+
Sbjct: 256 HQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEM--HTKDIVAWNAMISGYAQHG 313
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
R+A+ LF++ + V D + + +VL+AC
Sbjct: 314 GGRKAIKLFEKM------------KDEGVVPDWITLLAVLTAC 344
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/668 (34%), Positives = 354/668 (52%), Gaps = 66/668 (9%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN I + + + F M+ L +T +++C + L++ KQ H F
Sbjct: 743 WNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVF 802
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
FG DV + + LI MYSK G+L AR++FD + R N SW SM++ Y +A
Sbjct: 803 RFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENR--NTSSWNSMISSYAALGFLNDA 860
Query: 161 LLLFKEF--------------LLEESECGGASENSDNVF---------VDSVAIASVLSA 197
LF E LL G E N+ +S ++ SVL A
Sbjct: 861 WSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQA 920
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
S + + + HG+V++ GFD +V VG +LID Y + + ++ VFD M ++ W
Sbjct: 921 ISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAW 980
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKS-----------------------TDVKCNAVTLS 294
NS+++ Y+ G+ +AL + +QM K N+ +++
Sbjct: 981 NSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASIT 1040
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
+L A A L +L+ GK IH I+ E V V T++IDMY K + A K F +++ K
Sbjct: 1041 CLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNK 1100
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
+ SW MI G+ + +EA+ +F +M K GV P+ ITF ++LSAC ++GL+ EGW +
Sbjct: 1101 TLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYF 1160
Query: 415 NTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
++M ++ I P +EHY CMVDLLGRAG L EA+DLI M +K D +WG+LLG+CRIHKN
Sbjct: 1161 DSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKN 1220
Query: 475 VDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVE 534
+ E AAK LF+LEPNN ++L+ N+Y+ RWED++ R LM + +S ++
Sbjct: 1221 LXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQ 1280
Query: 535 LRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIH 594
+ +VH F +K HP KIY L +L +++++GYV D+ V ++D+ EK+ L H
Sbjct: 1281 INQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSH 1340
Query: 595 SEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDG 636
+EKLA N R+C DCH+ + IS V RE+ +RD RFH+F++G
Sbjct: 1341 TEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREG 1400
Query: 637 LCSCGDYW 644
CSC D+W
Sbjct: 1401 KCSCNDFW 1408
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 199/413 (48%), Gaps = 55/413 (13%)
Query: 37 NVFSWNSVIADLARGGDSVE-ALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
N WNS + + S+ L F + + + A+K+C+ + D+ G +
Sbjct: 637 NYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEI 696
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H GF DV++ AL++ Y +C L A ++F E+P + W + +Q++
Sbjct: 697 HGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNP--EALLWNEAIILNLQSE 754
Query: 156 NAREALLLFK--EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
++ + LF+ +F ++E + I VL AC ++ + HG+
Sbjct: 755 KLQKGVELFRKMQFSFLKAE--------------TATIVRVLQACGKMGALNAAKQIHGY 800
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V + G DS+V + N LI Y++ G ++++R+VFD M ++ +WNS+I+ YA G +A
Sbjct: 801 VFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDA 860
Query: 274 LDVFDQMVKSTDVKCNAVT-----------------------------------LSAVLL 298
+F ++ +S+D+K + VT +++VL
Sbjct: 861 WSLFYEL-ESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQ 919
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
AI+ LG L +GK H V++ + V VGTS+IDMY K + A+ F+ MK +N+ +
Sbjct: 920 AISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFA 979
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
W ++++GY +AL L +M K G++P+ +T+ ++S + G ++ +
Sbjct: 980 WNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAF 1032
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 138/283 (48%), Gaps = 14/283 (4%)
Query: 139 RNIVSWTSMLTGYVQNDNAREALL-LFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
RN + W S + + + + +L +FKE + V DS + L
Sbjct: 636 RNYLKWNSFVEEFKSSAGSLHIVLEVFKEL------------HGKGVVFDSEVYSVALKT 683
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C+RV + HG +IKRGFD +V + L++ Y R ++ + +VF M +A+ W
Sbjct: 684 CTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLW 743
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N I + Q+ + +++F +M + + +K T+ VL A +G L K IH V
Sbjct: 744 NEAIILNLQSEKLQKGVELFRKM-QFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVF 802
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ L+ V + +I MY K G+++LAR+ F+ M+ +N SW +MI+ Y +A
Sbjct: 803 RFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWS 862
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
LFY++ + ++P+ +T+ +LS G +E + L M E
Sbjct: 863 LFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE 905
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 164/353 (46%), Gaps = 25/353 (7%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K ++ +WN +++ G E L M+ P S+ +++ S L L+ GK+
Sbjct: 873 KPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKE 932
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H GF DV+V ++LIDMY K L A+ +FD + + RNI +W S+++GY
Sbjct: 933 THGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNM--KNRNIFAWNSLVSGYSFK 990
Query: 155 DNAREALLLFKEFLLEESECGGASEN-----------SDNVFV-DSVAIASVLSACSRVT 202
+AL L + E + + N + F+ +S +I +L AC+ ++
Sbjct: 991 GMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLS 1050
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ + H I+ GF +V V LID Y++ + + KVF + K +WN +I
Sbjct: 1051 LLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIM 1110
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-----KCIHDQVI 317
+A GL EA+ VF++M K V +A+T +A+L A + G++ G I D I
Sbjct: 1111 GFAIFGLGKEAISVFNEMQK-VGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRI 1169
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMH 369
LE ++D+ + G +D A + M K + W A++ +H
Sbjct: 1170 VPRLEHYC----CMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIH 1218
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/623 (35%), Positives = 350/623 (56%), Gaps = 63/623 (10%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P ST+ I+ CS L GK+ H+ GF + + + ++ MY+KCG L DARK+
Sbjct: 85 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKV 144
Query: 131 FDEIPQR--------------------IRNIV---------SWTSMLTGYVQNDNAREAL 161
FDE+P+R RN+ SWT+M+TGYV+ D EAL
Sbjct: 145 FDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEAL 204
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGF 219
+L+ L++ + N+F S A+A+ + + G HG +++ G
Sbjct: 205 VLYS--LMQR-----VPNSKPNIFTVSSAVAAA------AAIKCIRRGKEIHGHIVRAGL 251
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
DS+ + ++L+D Y + G +D +R +FD +I+KD V+W S+I Y ++ E +F +
Sbjct: 252 DSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSE 311
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
++ S + + N T S VL A A L LG+ +H + ++ + +S+IDMY KCG
Sbjct: 312 LIGSCE-RPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCG 370
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
++ AR + + ++ S T++I GY + + EAL F ++K+G +P+++TFV+VLS
Sbjct: 371 NIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLS 430
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
AC+HAGLV++G + ++ + ++ +HY C+VDLL R+G+ ++ ++ M +K
Sbjct: 431 ACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSK 490
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
+W S+LG C + N+DL E AA++LF++EP N +V ++NIYA AG+WE+ + R M
Sbjct: 491 FLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRM 550
Query: 520 KNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVI 579
+ + K PG S E++ K H F+ D HP + +I E+L EL K++E GYV + V+
Sbjct: 551 QEIGITKKPGSSWTEIKRKRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGYVPATSLVL 610
Query: 580 HDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDRE 621
HDV+ E+KE L HSEKLA NLR C DCH+ I+ ISK+ R+
Sbjct: 611 HDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKRK 670
Query: 622 IVVRDSKRFHYFKDGLCSCGDYW 644
I +RDS RFH F++G CSC DYW
Sbjct: 671 ITIRDSTRFHCFENGQCSCRDYW 693
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 107/251 (42%), Gaps = 20/251 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K +DK+ V SW S+I + E FS + P TF + +C+ L
Sbjct: 277 IFDKIIDKD-VVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLT 335
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+Q H GF F SS+LIDMY+KCG + AR + D P+ ++VS TS+
Sbjct: 336 TEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPK--PDLVSLTSL 393
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV-TVNGV 206
+ GY QN EAL F L ++ D V +VLSAC+ V
Sbjct: 394 IGGYAQNGKPDEALKYFDLLLKSGTK------------PDHVTFVNVLSACTHAGLVEKG 441
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA-VTWNSII---A 262
E + K L+D AR G + + V M K + W S++ +
Sbjct: 442 LEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCS 501
Query: 263 IYAQNGLAAEA 273
Y LA EA
Sbjct: 502 TYGNIDLAEEA 512
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/633 (35%), Positives = 347/633 (54%), Gaps = 34/633 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K ++ +V SW ++IA + A + M+ + P + T + H L
Sbjct: 165 KRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLS 224
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
GK + DV V ++ ++M+ G L DAR+LF+++ R ++V+W ++T
Sbjct: 225 EGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDR--DVVTWNIVITF 282
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
YVQN+N EA+ LF D + + + +L+ + +T +
Sbjct: 283 YVQNENFGEAVRLFGRL------------QQDGIKANDITFVLMLNVYTSLTSLAKGKVI 330
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H V + G+D +V V L+ Y R + K+F M KD +TW + YAQNG
Sbjct: 331 HELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFR 390
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EAL +F +M + + + TL AVL AHL L+ G+ IH +I+ ++V T+
Sbjct: 391 KEALQLFQEM-QLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETA 449
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+I+MY KCG++ AR F +M ++++ W +M+ Y H E L LF +M G + +
Sbjct: 450 LINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKAD 509
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
++FVSVLSA SH+G V +G+ + M +F+I P E YGC+VDLLGRAG+++EA D++
Sbjct: 510 AVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIV 569
Query: 451 EGMK-VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
+ D ++W +LLGACR H D + AA+++ E +P++ G +V+LSN+YA AG W
Sbjct: 570 LKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDW 629
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
+ V R R LM++R + K PG S +E+ +VH FL GD+ HP+ IY L+ LN +++
Sbjct: 630 DGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAA 689
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GY+ D ++HDV+ E KE L HSE+LA NLRVC DCHT
Sbjct: 690 GYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTAT 749
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ ISK+ REI+VRD+ RFH FKDG CSC DYW
Sbjct: 750 KYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 136/445 (30%), Positives = 226/445 (50%), Gaps = 19/445 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+++ +VF+W +I + GD AL F M++ + PT+ T+ + +C++ L G
Sbjct: 66 LERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDG 125
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H Q GF DVFV +ALI+MY+KCG + A F + R++VSWT+M+ V
Sbjct: 126 MEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEH--RDVVSWTAMIAACV 183
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+D A L++ L D V + + + +V +A + +
Sbjct: 184 QHDQFALARWLYRRMQL------------DGVVPNKITLYTVFNAYGDPHYLSEGKFIYS 231
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V R +S+V V N+ ++ + G + +R++F+ M+++D VTWN +I Y QN E
Sbjct: 232 LVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGE 291
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+ +F ++ + +K N +T +L L L GK IH+ V + + V+V T+++
Sbjct: 292 AVRLFGRL-QQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALM 350
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+Y +C A K F M K+V +WT M Y + +EAL LF +M G RP
Sbjct: 351 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 410
Query: 393 TFVSVLSACSHAGLVQEGWHW-LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
T V+VL C+H +Q+G + + + F +E VE ++++ G+ GK+ EA + E
Sbjct: 411 TLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFE 468
Query: 452 GMKVKADFVVWGSLLGACRIHKNVD 476
M K D +VW S+LGA H D
Sbjct: 469 KM-AKRDILVWNSMLGAYAQHGYYD 492
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 192/400 (48%), Gaps = 29/400 (7%)
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
P + F ++ CS+ ++ G++ H GF ++ V LI MY++CG + +A+
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
++F EI +R +++ +WT M+ Y Q + AL +F + ++V
Sbjct: 61 QVF-EILER-KDVFAWTRMIGIYCQQGDYDRALGMFYQM------------QEEDVMPTK 106
Query: 189 VAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
V ++L+AC+ + + +G HG ++++GF+ +V VG LI+ Y + G V + F
Sbjct: 107 VTYVAILNACA--STESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSF 164
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ +D V+W ++IA Q+ A A ++ +M + V N +TL V A L
Sbjct: 165 KRLEHRDVVSWTAMIAACVQHDQFALARWLYRRM-QLDGVVPNKITLYTVFNAYGDPHYL 223
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
GK I+ V +E V V S ++M+ G + AR+ F M +++V +W +I Y
Sbjct: 224 SEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFY 283
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ EA+ LF ++ + G++ N ITFV +L+ + + +G + HE E G
Sbjct: 284 VQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKG-----KVIHELVKEAG 338
Query: 427 VEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW 462
+ ++ L GR +A+ + M K D + W
Sbjct: 339 YDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSK-DVITW 377
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 162/327 (49%), Gaps = 18/327 (5%)
Query: 187 DSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
D+ ++L CS + V G H V RGF+ V LI YA+ G V +++
Sbjct: 4 DTAFFVALLQRCS--SAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VF+ + KD W +I IY Q G AL +F QM + DV VT A+L A A
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQM-QEEDVMPTKVTYVAILNACASTE 120
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L+ G IH Q+++ E V VGT++I+MY KCG V A +F +++ ++V SWTAMIA
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
H + A L+ +M GV PN IT +V +A + EG ++ ++ +E
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEG-KFIYSLVSSRVME 239
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
V +++ G AG L +A L E M V D V W ++ +N + GE A +
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVI--TFYVQNENFGE--AVR 294
Query: 485 LF------ELEPNNCGYHVLLSNIYAN 505
LF ++ N+ + VL+ N+Y +
Sbjct: 295 LFGRLQQDGIKANDITF-VLMLNVYTS 320
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/634 (35%), Positives = 356/634 (56%), Gaps = 38/634 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ NVFSW +IA A+ G +E LR S M + + P TF + +C+A+ L
Sbjct: 178 IQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEA 237
Query: 93 KQAHQQAFI-FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K H G RD V +ALI++Y KCG L +A +F +I + +IVSW+SM+ +
Sbjct: 238 KILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNK--DIVSWSSMIAAF 295
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
Q+ A+ A+ L LE V ++V +VL A + + + H
Sbjct: 296 AQSGQAKSAIQLLMLMDLE------------GVRPNNVTFVNVLEAVTSLKAFQYGKEIH 343
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+++ G+ +V + + L+ Y G V+ +R +F+ E+D V+W+S+IA Y+QN A
Sbjct: 344 ARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPA 403
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
AL +F +M + V+ N+VT + + A A +G LR G +H++V + L++ V V T++
Sbjct: 404 RALSLFREM-EVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATAL 462
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+++Y KCG+++ A F MK+KN+ +WT++ YG + +L L + M G++P+
Sbjct: 463 VNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDG 522
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
I FV++L +C++AG + +G H+ N M +F I P VEH GCMVD+LGRAGKL+ A LI
Sbjct: 523 IVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLIN 582
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
MK ++ + W LL AC+ H + AA+K+F+LEP N +VLLS+++ AG WE
Sbjct: 583 TMKFESS-LAWMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEA 641
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQH--EKIYEYLEELNVKLQEV 569
E TR M R + + G S +E+ +VH F+ P H +I+ LE+L ++Q
Sbjct: 642 AEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGA 701
Query: 570 GYVTDMTSV-IHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
GYV D T+V + DV++ KE + HSE LA NLR+C DCH
Sbjct: 702 GYVPDATAVRLRDVEEGGKENAVPYHSEMLALGLGIISTPAGTPLRITKNLRMCSDCHIA 761
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +SK+V R I VRD +R H+F++G+CSCGDYW
Sbjct: 762 TKFVSKLVHRRISVRDGRRHHHFENGVCSCGDYW 795
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 138/444 (31%), Positives = 221/444 (49%), Gaps = 28/444 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ D+N V +W S+I+ G +A+ F M ++P R TF + S
Sbjct: 72 VFDRMKDQN-VVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRE 130
Query: 88 -DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+L GK+ H G+ D V + +++MY KCG++ A +FD I N+ SWT
Sbjct: 131 RNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQD--PNVFSWTI 188
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ Y QN + E L L N V D +VL AC+ V
Sbjct: 189 IIAAYAQNGHCMEVLRLLSRM------------NQAGVKPDGYTFTTVLGACTAVGALEE 236
Query: 207 TEGAHGFVIKR-GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H I G D + VG LI+ Y + G ++ + VF + KD V+W+S+IA +A
Sbjct: 237 AKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFA 296
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q+G A A+ + ++ V+ N VT VL A+ L + GK IH ++++ + V
Sbjct: 297 QSGQAKSAIQLL-MLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDV 355
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+ ++++ MYC G V+ AR F +E++V SW++MIAGY + AL LF +M
Sbjct: 356 CLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVD 415
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE----FNIEPGVEHYGCMVDLLGRAG 441
GV+PN +TFVS + AC+ G ++ G T HE ++ V +V+L G+ G
Sbjct: 416 GVQPNSVTFVSAIDACAGVGALRRG-----TQLHERVRCLGLDKDVPVATALVNLYGKCG 470
Query: 442 KLKEAYDLIEGMKVKADFVVWGSL 465
+L+EA + GMK K + + W S+
Sbjct: 471 RLEEAEAVFLGMK-KKNLLTWTSI 493
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 151/289 (52%), Gaps = 16/289 (5%)
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGF-----DSEVGVGNTLIDAYARGGHVDVSRK 244
A A++L+ACS + + HG V++ E + N +I Y R G D++
Sbjct: 12 ACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALD 71
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA-HL 303
VFD M +++ V W S+I+ + G +A+ +F +M+ S V + +T +++LL +
Sbjct: 72 VFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLS-GVSPDRITFTSILLKWSGRE 130
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L GK +H +++ E +V +++MY KCG V+ A F+ +++ NV SWT +I
Sbjct: 131 RNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIII 190
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG----WHWLNTMGH 419
A Y + E L L +M +AGV+P+ TF +VL AC+ G ++E +++ G
Sbjct: 191 AAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGL 250
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ + G +++L G+ G L+EA+ + + K D V W S++ A
Sbjct: 251 DRDAAVGT----ALINLYGKCGALEEAFGVFVQIDNK-DIVSWSSMIAA 294
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/669 (34%), Positives = 357/669 (53%), Gaps = 61/669 (9%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIK 81
+ + + F K D++ V +WN +I + G A++A+++M R S TR T +K
Sbjct: 89 SEMESTFEKLPDRDGV-TWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLF---------- 131
S+ + GKQ H Q GF + V S L+ MY+ G +SDA+K+F
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 132 --------------DEIPQRIRNI----VSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
++ Q R + VSW +M+ G QN A+EA+ F+E ++
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ--- 264
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY 233
+ +D SVL AC + + H +I+ F + VG+ LID Y
Sbjct: 265 ---------GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ + ++ VFD M +K+ V+W +++ Y Q G A EA+ +F M +S + + TL
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS-GIDPDHYTL 374
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
+ A A++ L G H + I L V V S++ +Y KCG +D + + FN+M
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
++ SWTAM++ Y RA E + LF KM++ G++P+ +T V+SACS AGLV++G +
Sbjct: 435 RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY 494
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
M E+ I P + HY CM+DL R+G+L+EA I GM D + W +LL ACR
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
N+++G+ AA+ L EL+P++ + LLS+IYA+ G+W+ V + R M+ + + K PG S +
Sbjct: 555 NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
+ +GK+H+F D+ P ++IY LEELN K+ + GY D + V HDV++ K L
Sbjct: 615 KWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNY 674
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSE+LA NLRVC DCH + IS V REI+VRD+ RFH FKD
Sbjct: 675 HSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKD 734
Query: 636 GLCSCGDYW 644
G CSCGD+W
Sbjct: 735 GTCSCGDFW 743
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 211/418 (50%), Gaps = 63/418 (15%)
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
+ + F+ + ++ Y+ + AR++FD IPQ N+ SW ++L Y + E F
Sbjct: 38 YPETFLYNNIVHAYALMKSSTYARRVFDRIPQP--NLFSWNNLLLAYSKAGLISEMESTF 95
Query: 165 KEF----------LLEE---SECGGASENSDNV----FVDSVAIASVLSACSRVTVNG-- 205
++ L+E S GA+ + N F ++ ++++ + NG
Sbjct: 96 EKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHV 155
Query: 206 -VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM--------------- 249
+ + HG VIK GF+S + VG+ L+ YA G + ++KVF G+
Sbjct: 156 SLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGL 215
Query: 250 ---------------IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
+EKD+V+W ++I AQNGLA EA++ F +M K +K +
Sbjct: 216 LACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFG 274
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
+VL A LG + GK IH +I+ + ++ + VG+++IDMYCKC + A+ F++MK+K
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
NV SWTAM+ GYG RA EA+ +F M ++G+ P++ T +SAC++ ++EG +
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF- 393
Query: 415 NTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
H I G+ HY +V L G+ G + ++ L M V+ D V W +++ A
Sbjct: 394 ----HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSA 446
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/438 (44%), Positives = 284/438 (64%), Gaps = 19/438 (4%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
V N L+D YA+ G+ D + VF+ M +KD ++W S++ NG EAL +F +M +
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEM-RIM 62
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+ + + ++AVL A A L VL GK +H +K L S+ V S++ MY KCG ++ A
Sbjct: 63 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
K F+ M+ ++V +WTA+I GY + R RE+L+ + MI +GV+P++ITF+ +L ACSHA
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHA 182
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGS 464
GLV+ G + +M + I+PG EHY CM+DLLGR+GKL EA +L+ M V+ D VW +
Sbjct: 183 GLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKA 242
Query: 465 LLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRL 524
LL ACR+H NV+LGE AA LFELEP N +VLLSN+Y+ AG+WE+ +TR LMK R +
Sbjct: 243 LLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGV 302
Query: 525 AKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQ 584
+K PG S +E+ KVH F+ D+ HP+ +IY ++E+ + ++E GYV DM +HD+D+
Sbjct: 303 SKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDE 362
Query: 585 EEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRD 626
E KE+ L HSEKLA NLR+CGDCHT ++ +S V R +++RD
Sbjct: 363 EGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRD 422
Query: 627 SKRFHYFKDGLCSCGDYW 644
S FH+F++G CSC DYW
Sbjct: 423 SNCFHHFREGACSCSDYW 440
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 27/242 (11%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F K DK+ V SW S++ G EALR F MR + + P + + +C+ L
Sbjct: 24 VFEKMTDKD-VISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELT 82
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GKQ H G + V ++L+ MY+KCG + DA K+FD + I+++++WT++
Sbjct: 83 VLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSM--EIQDVITWTAL 140
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY QN RE+L + + + + V D + +L ACS G+
Sbjct: 141 IVGYAQNGRGRESLNFYNBMI------------ASGVKPDFITFIGLLFACSHA---GLV 185
Query: 208 EGAHGFVIKRGFDSEVGVGN------TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSI 260
E HG + + G+ +ID R G + ++++ + M ++ DA W ++
Sbjct: 186 E--HGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL 243
Query: 261 IA 262
+A
Sbjct: 244 LA 245
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 24/152 (15%)
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+V +++DMY K G D A F +M +K+V SWT+++ G + EAL LF +M
Sbjct: 3 LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62
Query: 386 GVRPNYITFVSVLSACS-----------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
G+ P+ I +VLSAC+ HA ++ G +G +++ +V
Sbjct: 63 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSG------LGSSLSVD------NSLV 110
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ + G +++A + + M+++ D + W +L+
Sbjct: 111 SMYAKCGCIEDANKVFDSMEIQ-DVITWTALI 141
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 236/666 (35%), Positives = 358/666 (53%), Gaps = 64/666 (9%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
T F + N A L G EA +F S + F +++C
Sbjct: 26 TISFKTHFQNGRFSDGNEQFATLCSKGHIREAFESFLS----EIWAEPRLFSNLLQACIP 81
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI------- 138
L + GKQ H F G D F+S+ L+++YSK GEL A LFD +P+R
Sbjct: 82 LKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIM 141
Query: 139 ----------------------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
RN+ +W +M+TG + + EALLLF
Sbjct: 142 IKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRM--------- 192
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
N + D ++ SVL C+ + + H +V+K GF+ + VG +L Y +
Sbjct: 193 ---NELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKA 249
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G + +V + M + V WN++++ AQ G LD + M+K + + +T +V
Sbjct: 250 GSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQY-CMMKMAGFRPDKITFVSV 308
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
+ + + L +L GK IH + +K V V +S++ MY +CG + + K F + KE++V
Sbjct: 309 ISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDV 368
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
W++MIA YG H + EA+ LF +M + + N ITF+S+L ACSH GL +G +
Sbjct: 369 VLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDM 428
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M ++ ++ ++HY C+VDLLGR+G L+EA +I M VKAD ++W +LL AC+IHKN +
Sbjct: 429 MVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAE 488
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
+ A ++ ++P + +VLL+NIY++A RW++V R MK++ + K PG S VE++
Sbjct: 489 IARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVK 548
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
+VH F +GD+ HP+H +I +YLEEL +++ GYV D +SV+HD+D EEKE LR HSE
Sbjct: 549 NQVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSE 608
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLRVC DCH I+ IS++ EI+VRDS RFH+FK+G C
Sbjct: 609 KLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTC 668
Query: 639 SCGDYW 644
SCGDYW
Sbjct: 669 SCGDYW 674
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/539 (38%), Positives = 323/539 (59%), Gaps = 36/539 (6%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
LS AR +F IP + +++ +++ + F S S S+
Sbjct: 38 LSYARYVFSRIPSP--DTIAYNTIIRSH-------------SRFFPSHSLSYFFSMRSNG 82
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ +D+ VL ACSR+ +N H ++K G S++ V N LI Y G ++++
Sbjct: 83 IPLDNFTFPFVLKACSRLQIN---LHLHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAV 139
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
KVFD M E+D+V+W+++IA + NG A+EALD+F++M V + VT+ +V+ AI+HL
Sbjct: 140 KVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHL 199
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G L LG+ + + ++ SV +GT++IDM+ +CG +D + F +M +NV +WTA+I
Sbjct: 200 GDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALI 259
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
G G+H R+ EAL +F+ M K+GV+P+Y+TF VL ACSH GLV+EGW ++ + +
Sbjct: 260 NGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYGM 319
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
+P ++HYGCMVD+LGRAG L EAYD +E M +K + ++W +LLGAC H N+ L E
Sbjct: 320 DPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKA 379
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
K+ ++ + G VLLSN+Y AGRW + RS M+ +R+ K PG S + + +H F+
Sbjct: 380 KISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFV 439
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
GD HPQ E I ++L + L+ GY+ +V+HD+++EE+E +L HSEKLA
Sbjct: 440 SGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFA 499
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH+ ++ IS +R+I++RD RFH+F+ GLCSC DYW
Sbjct: 500 ILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKIIIRDRNRFHHFEKGLCSCHDYW 558
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/557 (38%), Positives = 332/557 (59%), Gaps = 33/557 (5%)
Query: 106 RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
R++ + LI+ + + G+L A K+FDE+ +R N+ +W +M++G +Q + L LF+
Sbjct: 21 RNIMSHNILINGHVQHGDLDSAIKVFDEMLER--NVATWNAMVSGLIQFEFNENGLFLFR 78
Query: 166 EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGV 225
E E G D + SVL C+ + + + H +V+K G++ + V
Sbjct: 79 EM----HELG--------FLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVV 126
Query: 226 GNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD 285
G++L Y + G + KV M ++ V WN++IA AQNG LD+++ M+K +
Sbjct: 127 GSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYN-MMKMSG 185
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
++ + +TL +V+ + A L L G+ IH + IK +V V +S+I MY KCG ++ +
Sbjct: 186 LRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSM 245
Query: 346 KAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
KA + + W++MIA YG H R EA+ LF +M + G+ N +TF+S+L ACSH G
Sbjct: 246 KALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNG 305
Query: 406 LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
L ++G + M ++ ++P +EHY C+VDLLGR+G L EA +I M ++AD V+W +L
Sbjct: 306 LKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTL 365
Query: 466 LGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLA 525
L ACRIH+N D+ A+++ L P + +VLLSNI+A+A RW+DV + R+ M++R +
Sbjct: 366 LSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVK 425
Query: 526 KTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQE 585
K PG S +E++ +V F +GDK HP E+I YL+EL +++ GYV D +V HD D E
Sbjct: 426 KEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSE 485
Query: 586 EKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDS 627
EKE +L HSEKLA NLR+C DCH I+LIS + +REI+VRD+
Sbjct: 486 EKENSLVNHSEKLAIAFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDT 545
Query: 628 KRFHYFKDGLCSCGDYW 644
RFH+FK G CSCGDYW
Sbjct: 546 SRFHHFKHGKCSCGDYW 562
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 176/375 (46%), Gaps = 22/375 (5%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP 77
+H + +F++ +++N V +WN++++ L + + L F M +L P T
Sbjct: 35 QHGDLDSAIKVFDEMLERN-VATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLG 93
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
++ C+ L ++GKQ H +G+ ++ V S+L MY K G L + K+ + R
Sbjct: 94 SVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAM--R 151
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
IRN+V+W +++ G QN + L L+ + + D + + SV+S+
Sbjct: 152 IRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKM------------SGLRPDKITLVSVISS 199
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
+ + + H IK G +S V V ++LI Y++ G ++ S K D+V W
Sbjct: 200 SAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLW 259
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
+S+IA Y +G EA+ +F+QM + + N VT ++L A +H G+ G ++
Sbjct: 260 SSMIAAYGFHGRGEEAVHLFEQM-EQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMV 318
Query: 318 -KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREA 375
K L+ + T ++D+ + G +D A M E +V W +++ CR
Sbjct: 319 EKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSA----CRIHRN 374
Query: 376 LDLFYKMIKAGVRPN 390
D+ + + +R N
Sbjct: 375 ADMATRTAEEILRLN 389
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/631 (36%), Positives = 350/631 (55%), Gaps = 34/631 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + ++ SWN++I+ + G++++AL+ + + P R TF A+ +CS+ L G
Sbjct: 308 MSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDG 367
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H H ++ V ++LI MY KC + DA ++F +P ++VS ++ Y
Sbjct: 368 RMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNH--DVVSCNILIGSYA 425
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL-SACSRVTVNGVTEGAH 211
++ +A+ +F F + E V ++ + I ++L S S + H
Sbjct: 426 VLEDGTKAMQVF--FWMRRGE----------VKLNYITIVNILGSFTSSNDLRNYGLPLH 473
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+ I GF S+ V N+LI YA+ G ++ S VF +I + V+WN++IA Q+G
Sbjct: 474 AYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGE 533
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
E+L +F M + + + L+ + + A L L G +H +K L V +
Sbjct: 534 ESLKLFMDMRHDGN-GLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAA 592
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+DMY KCG++D K + + W +I+GY + +EA + F MI G P+Y
Sbjct: 593 MDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDY 652
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+TFV++LSACSHAGLV +G + N+M F + PG++H C+VD+LGR G+ EA IE
Sbjct: 653 VTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIE 712
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M V + ++W SLL + R HKN+D+G AAK+L EL+P + +VLLSN+YA + RW D
Sbjct: 713 DMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSD 772
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
V+R RS MK L K P S ++ + +V F +GD H +KIY L+E+ +KL+EVGY
Sbjct: 773 VDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKLREVGY 832
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
V D +S +HD D+E+KE L HSEKLA NLRVC DCH V +L
Sbjct: 833 VADTSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVCADCHLVFKL 892
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+S V DREIV+RD RFH+FK G CSC D+W
Sbjct: 893 VSMVFDREIVLRDPYRFHHFKGGSCSCSDFW 923
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 202/442 (45%), Gaps = 29/442 (6%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS-G 92
D SW + I+ R G A MR+ + + + +C + + G
Sbjct: 4 DHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACG 63
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H G +V++ +AL+ +Y + DA++LF E+P+R N+VSWT+++
Sbjct: 64 AAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPER--NVVSWTALMVALS 121
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT--VNGVTEGA 210
N + EAL ++ E C ++ A A+V+S C + V G+ +
Sbjct: 122 SNGHLEEALGYYRRMRRERIAC------------NANAFATVVSLCGSLEDEVAGLQVFS 169
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H VI G +V V N+LI G V + K+F M E+D V+WN+++++Y+ GL
Sbjct: 170 H--VIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLC 227
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+++ VF M + ++ +A TL +++ A + G +H ++ L + V +
Sbjct: 228 SKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNA 287
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+++MY G++ A F M +++ SW MI+ Y + +AL +++ P+
Sbjct: 288 LVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPD 347
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEA 446
+TF S L ACS G + +G M H ++ + H ++ + G+ +++A
Sbjct: 348 RMTFSSALGACSSPGALMDG-----RMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDA 402
Query: 447 YDLIEGMKVKADFVVWGSLLGA 468
+ + M D V L+G+
Sbjct: 403 ERIFQLMP-NHDVVSCNILIGS 423
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 203/441 (46%), Gaps = 20/441 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF + +++ V SWN++++ + G ++ R FS MR+ L +T C++ S A
Sbjct: 202 LFYRMEERDTV-SWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASS 260
Query: 88 DLHS-GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D S G H G H + V +AL++MYS G+L+DA LF + + R+++SW +
Sbjct: 261 DYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSR--RDLISWNT 318
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M++ YVQN N +AL + L N D + +S L ACS
Sbjct: 319 MISSYVQNGNNMDALKTLGQLL------------HTNEGPDRMTFSSALGACSSPGALMD 366
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H ++ + VGN+LI Y + ++ + ++F M D V+ N +I YA
Sbjct: 367 GRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAV 426
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR-LGKCIHDQVIKMDLEESV 325
+A+ VF M + +VK N +T+ +L + LR G +H I
Sbjct: 427 LEDGTKAMQVFFWM-RRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDD 485
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V S+I MY KCG ++ + F ++ ++V SW AMIA H E+L LF M
Sbjct: 486 YVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHD 545
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G ++I +S+ + ++EG L+ +G + + +D+ G+ GK+ E
Sbjct: 546 GNGLDHICLAECMSSSASLASLEEGMQ-LHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDE 604
Query: 446 AYDLIEGMKVKADFVVWGSLL 466
++ ++ W +L+
Sbjct: 605 MLKMLPDPAIRPQ-QCWNTLI 624
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/637 (37%), Positives = 352/637 (55%), Gaps = 84/637 (13%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSALHDLHS 91
+ +VF +N++I L+ AL+ F MR+ S+ P +F +K+ + L +
Sbjct: 65 IRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTN 124
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G Q H A +G +FV + LI MY++C L ARK+FDE+ + NIV+W +
Sbjct: 125 GLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEP--NIVAWNA----- 177
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+++AC R GV +
Sbjct: 178 ------------------------------------------IVAACFRC--EGVKDAEQ 193
Query: 212 GF--VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
F + R S N ++ Y + G + ++R+VF M KD V+W+++I +A NG
Sbjct: 194 VFRCMPIRNLTS----WNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGN 249
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
+A F + V+ ++ N V+L+ VL A A G G+ +H V K + + V
Sbjct: 250 FNDAFAFFRE-VRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNN 308
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
++ID Y KCG +D+AR F+ M ++ SWTAMIAG MH EA+ LF +M ++ ++P
Sbjct: 309 ALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKP 368
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ ITF+S+L ACSHAGLV G + + M + + IEP +EHYGCMVDL GRAGKL++AYD
Sbjct: 369 DSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDF 428
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
+ M + + +VW +LLGAC IH N+ L ++L EL+P N G HVLLSNIYA AG+W
Sbjct: 429 VCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKW 488
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH----PQHEKIYEYLEELNVK 565
+DV R M ++RL KTPG+S++E+ +++F+ G+K++ H+K+ E + L +
Sbjct: 489 KDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSRLRI- 547
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
E GYV ++ SV+HD++ EEKE ++ HSEKLA NLR+C DC
Sbjct: 548 --EGGYVPEVGSVLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIRVVKNLRICRDC 605
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
HTV++LISKV + EIVVRD RFH F G CSC DYW
Sbjct: 606 HTVMKLISKVYEVEIVVRDRSRFHSFTHGSCSCRDYW 642
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 21/245 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F K K++V SW+++I A G+ +A F +R+ + P + + +C+
Sbjct: 225 VFMKMPLKDDV-SWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAG 283
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H GF + + V++ALID YSKCG L AR +FD + + R+ VSWT+M
Sbjct: 284 AFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLR--RSAVSWTAM 341
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G + EA+ LF E +EES N+ DS+ S+L ACS + V
Sbjct: 342 IAGMAMHGYGEEAIRLFNE--MEES----------NIKPDSITFISILYACSHAGL--VD 387
Query: 208 EGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAI 263
G F V G + + ++D Y R G + + M I + + W +++
Sbjct: 388 LGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGA 447
Query: 264 YAQNG 268
+ +G
Sbjct: 448 CSIHG 452
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 128/317 (40%), Gaps = 75/317 (23%)
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R++F + D +N++I + + + AL +F +M + + ++ + + +L A A
Sbjct: 58 ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAA 117
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+ L G +H + L+ + VGT++I MY +C + ARK F++M E N+ +W A
Sbjct: 118 NCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNA 177
Query: 362 -------------------------------MIAGYGMHCRAREALDLFYKMI------- 383
M+AGY + A ++F KM
Sbjct: 178 IVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSW 237
Query: 384 ------------------------KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
+ G+RPN ++ VLSAC+ AG + G + H
Sbjct: 238 STMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFG-----RILH 292
Query: 420 EFNIEPG----VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV 475
F + G + ++D + G L A + + M ++ V W +++ +H
Sbjct: 293 GFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNM-LRRSAVSWTAMIAGMAMH--- 348
Query: 476 DLGEIAAKKLFELEPNN 492
GE A + E+E +N
Sbjct: 349 GYGEEAIRLFNEMEESN 365
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
SV++ + + N ++ L + + + SW ++IA +A G EA+R F+ M +
Sbjct: 305 SVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEES 364
Query: 68 SLTPTRSTFPCAIKSCS--ALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
++ P TF + +CS L DL + + +G + ++D+Y + G+L
Sbjct: 365 NIKPDSITFISILYACSHAGLVDLGCSYFS-RMVNTYGIEPVIEHYGCMVDLYGRAGKLQ 423
Query: 126 DARKLFDEIPQRIRNIVSWTSML 148
A ++P +IV W ++L
Sbjct: 424 QAYDFVCQMPISPNDIV-WRTLL 445
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/638 (37%), Positives = 361/638 (56%), Gaps = 43/638 (6%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-----SLTPTRSTFP 77
TN +F K + NV SWN+++ + GD+ F +R++ + T
Sbjct: 699 TNAQMIF-KMNNNKNVVSWNTMVGGFSAEGDT---HGTFDVLRQMLAGGEDVKADEVTIL 754
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
A+ C L S K+ H + F + V++A + Y+KCG LS A+++F I R
Sbjct: 755 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI--R 812
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ + SW +++ G+ Q+++ R +L + + + DS + S+LSA
Sbjct: 813 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS------------GLLPDSFTVCSLLSA 860
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
CS++ + + HGF+I+ + ++ V +++ Y G + + +FD M +K V+W
Sbjct: 861 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 920
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N++I Y QNG AL VF QMV C +++ V A + L LRLG+ H +
Sbjct: 921 NTVITGYLQNGFPDRALGVFRQMVLYGIQLC-GISMMPVFGACSLLPSLRLGREAHAYAL 979
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
K LE+ + S+IDMY K G + + K FN +KEK+ SW AMI GYG+H A+EA+
Sbjct: 980 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 1039
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
LF +M + G P+ +TF+ VL+AC+H+GL+ EG +L+ M F ++P ++HY C++D+L
Sbjct: 1040 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 1099
Query: 438 GRAGKLKEAYDLI-EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYH 496
GRAG+L +A ++ E M +AD +W SLL +CRIH+N+++GE A KLFELEP +
Sbjct: 1100 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENY 1159
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
VLLSN+YA G+WEDV + R M L K G S +EL KV +F+VG++ E+I
Sbjct: 1160 VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIK 1219
Query: 557 EYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------------- 599
L +K+ ++GY D SV HD+ +EEK LR HSEKLA
Sbjct: 1220 SLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVY 1279
Query: 600 -NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDG 636
NLR+C DCH +LISKV++REIVVRD+KRFH+FK+G
Sbjct: 1280 KNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 190/369 (51%), Gaps = 14/369 (3%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGKQA 95
N+F WN+VI+ +R E L F M + L P T+PC IK+C+ + D+ G
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H G DVFV +AL+ Y G ++DA +LFD +P+ RN+VSW SM+ + N
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE--RNLVSWNSMIRVFSDNG 622
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVA-IASVLSACSRVTVNGVTEGAHGFV 214
+ E+ LL E + EN D F+ VA + +VL C+R G+ +G HG+
Sbjct: 623 FSEESFLLLGEMM---------EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA 673
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+K D E+ + N L+D Y++ G + ++ +F K+ V+WN+++ ++ G
Sbjct: 674 VKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTF 733
Query: 275 DVFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
DV QM+ DVK + VT+ + H L K +H +K + + +V + +
Sbjct: 734 DVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVA 793
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
Y KCG + A++ F+ ++ K V SW A+I G+ R +LD +M +G+ P+ T
Sbjct: 794 SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFT 853
Query: 394 FVSVLSACS 402
S+LSACS
Sbjct: 854 VCSLLSACS 862
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 231/471 (49%), Gaps = 28/471 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-- 67
+++VS H T+ LF+ + + N+ SWNS+I + G S E+ M +
Sbjct: 581 NALVSFYGTHGFVTDALQLFD-IMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENG 639
Query: 68 --SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
+ P +T + C+ ++ GK H A +++ +++AL+DMYSKCG ++
Sbjct: 640 DGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCIT 699
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
+A+ +F +N+VSW +M+ G+ + + ++ L GG ++V
Sbjct: 700 NAQMIFKM--NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML-----AGG-----EDVK 747
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
D V I + + C + + H + +K+ F V N + +YA+ G + +++V
Sbjct: 748 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 807
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F G+ K +WN++I +AQ+ +LD QM K + + ++ T+ ++L A + L
Sbjct: 808 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACSKLKS 866
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
LRLGK +H +I+ LE + V S++ +Y CG++ + F+ M++K++ SW +I G
Sbjct: 867 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITG 926
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y + AL +F +M+ G++ I+ + V ACS ++ L H + ++
Sbjct: 927 YLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR-----LGREAHAYALKH 981
Query: 426 GVE---HYGC-MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+E C ++D+ + G + ++ + G+K K+ W +++ IH
Sbjct: 982 LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST-ASWNAMIMGYGIH 1031
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 164/328 (50%), Gaps = 23/328 (7%)
Query: 88 DLHSGKQAHQQAFIFGFHR---DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
D+ G++ HQ + G R D + + +I MY+ CG D+R +FD + R +N+ W
Sbjct: 454 DIEMGRKIHQ--LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL--RSKNLFQW 509
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++++ Y +N+ E L F E + ++ ++ D V+ AC+ ++
Sbjct: 510 NAVISSYSRNELYDEVLETFIEMI-----------STTDLLPDHFTYPCVIKACAGMSDV 558
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
G+ HG V+K G +V VGN L+ Y G V + ++FD M E++ V+WNS+I ++
Sbjct: 559 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 618
Query: 265 AQNGLAAEALDVFDQMVKSTD---VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL 321
+ NG + E+ + +M++ + TL VL A + LGK +H +K+ L
Sbjct: 619 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRL 678
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK 381
++ +++ +++DMY KCG + A+ F KNV SW M+ G+ D+ +
Sbjct: 679 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 738
Query: 382 MIKAG--VRPNYITFVSVLSACSHAGLV 407
M+ G V+ + +T ++ + C H +
Sbjct: 739 MLAGGEDVKADEVTILNAVPVCFHESFL 766
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 16/249 (6%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
+I YA G D SR VFD + K+ WN++I+ Y++N L E L+ F +M+ +TD+
Sbjct: 481 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 540
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+ T V+ A A + + +G +H V+K L E V VG +++ Y G V A + F
Sbjct: 541 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 600
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK----AGVRPNYITFVSVLSACSHA 404
+ M E+N+ SW +MI + + + E+ L +M++ P+ T V+VL C+
Sbjct: 601 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 660
Query: 405 -----GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
G GW + E + ++D+ + G + A +I M +
Sbjct: 661 REIGLGKGVHGWAVKLRLDKELVLN------NALMDMYSKCGCITNA-QMIFKMNNNKNV 713
Query: 460 VVWGSLLGA 468
V W +++G
Sbjct: 714 VSWNTMVGG 722
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/616 (37%), Positives = 341/616 (55%), Gaps = 94/616 (15%)
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIP-----------------------QRI------R 139
V++ LI MY+ G DAR+ FDEIP +R+ R
Sbjct: 141 LVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPER 200
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+VSWTS++ GY + +A+ F L SD V D VA+ LSACS
Sbjct: 201 NVVSWTSLIAGYSRAGRPADAVYCFNCML------------SDGVAPDEVAVIGALSACS 248
Query: 200 --------------------RVTVNGVTEGAHGFV-------IKRGFDSEVGVG------ 226
R+T N V + + FD+ VG G
Sbjct: 249 KLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDA-VGRGQKPEPW 307
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N +ID Y + GHVDV+R +FD M +D +T+NS+I Y +G +AL +F QM + +
Sbjct: 308 NAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQM-RRHGM 366
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+ + T+ ++L A A LG L G+ +H + + +EE V +GT+++DMY KCG+VD A
Sbjct: 367 RADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATA 426
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F++M E++V +WTAMIAG + ++AL+ F +M + G +P +T+++VL+ACSH+ L
Sbjct: 427 VFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSL 486
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ EG N M + P VEHYGCM+DLL R+G L EA L++ M ++ + V+WGS+L
Sbjct: 487 LDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSIL 546
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
ACR+HKN+DL AA+ L +L P +V L NIY ++ +W D +R R LM+ R + K
Sbjct: 547 SACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKK 606
Query: 527 TPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
T G+S + + G+VH F+ D+ HP +I +EE+ +L+ VGY + + DVD+EE
Sbjct: 607 TAGYSSITVAGQVHKFVANDQSHPWTLEIMAMMEEIACRLKSVGYSPVTSRIAVDVDEEE 666
Query: 587 KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSK 628
KE L HSEK+A NLRVC DCH+ I+L+S++ +REI+VRD
Sbjct: 667 KEQALLAHSEKIAIAFGLISLPPSLPIHIVKNLRVCEDCHSAIKLVSQLWNREIIVRDRS 726
Query: 629 RFHYFKDGLCSCGDYW 644
RFH+F+DG CSC D+W
Sbjct: 727 RFHHFRDGACSCNDFW 742
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 171/376 (45%), Gaps = 49/376 (13%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ NV SW S+IA +R G +A+ F+ M + P A+ +CS L +L G+
Sbjct: 199 ERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRL 258
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI-----PQR------------ 137
H + ALIDMY+KCG+++ A+ +FD + P+
Sbjct: 259 LHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLG 318
Query: 138 -------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
R+++++ SM+TGY+ + R+AL LF + +
Sbjct: 319 HVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQM------------RRHGM 366
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
D+ + S+L+AC+ + H + +R + +V +G L+D Y + G VD +
Sbjct: 367 RADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATA 426
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VF M E+D TW ++IA A NG+ +AL+ F QM K + +VT AVL A +H
Sbjct: 427 VFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQM-KRDGFQPTSVTYIAVLTACSHSS 485
Query: 305 VLRLGKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAM 362
+L G+ +++ + L V +ID+ + G +D A M + N W ++
Sbjct: 486 LLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSI 545
Query: 363 IAGYGMHCRAREALDL 378
++ CR + +DL
Sbjct: 546 LSA----CRVHKNIDL 557
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 21/240 (8%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+LF++ + +V ++NS+I G +AL+ F MR+ + T + +C++L
Sbjct: 325 SLFDQ-MGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASL 383
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G+ H DV++ +AL+DMY KCG + +A +F + + R++ +WT+
Sbjct: 384 GALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGE--RDVHTWTA 441
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ G N ++AL ES C D SV +VL+ACS ++ +
Sbjct: 442 MIAGLAFNGMGKDAL---------ESFC---QMKRDGFQPTSVTYIAVLTACSHSSL--L 487
Query: 207 TEGAHGFVIKRG---FDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
EG F R +V +ID AR G +D + + M ++ +AV W SI++
Sbjct: 488 DEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILS 547
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 84/210 (40%), Gaps = 34/210 (16%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
++L + + H+ +FD + +++ + Q A+ + + ++S V
Sbjct: 39 SSLTNTISAPRHLRYVLSLFDRLPHSTTFLFDTALRACLQASAGADHPVLLLRRMRSGGV 98
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCI--HDQVIKMDLEESV-IVGTSIIDMYCKCGQVDL 343
+ A T V A R G C+ H ++ L + +V +I MY G D
Sbjct: 99 RTGAFTFHFVFRCCAAGARARAGLCLMLHAACLRTMLPSAAPLVANPLIHMYASMGLTDD 158
Query: 344 ARKAFN-------------------------------QMKEKNVRSWTAMIAGYGMHCRA 372
AR+AF+ Q E+NV SWT++IAGY R
Sbjct: 159 ARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRP 218
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSACS 402
+A+ F M+ GV P+ + + LSACS
Sbjct: 219 ADAVYCFNCMLSDGVAPDEVAVIGALSACS 248
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 3/164 (1%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
T +F++ + + +V +W ++IA LA G +AL +F M++ PT T+ + +CS
Sbjct: 425 TAVFHR-MGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSH 483
Query: 86 LHDLHSGK-QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
L G+ ++ + H V +ID+ ++ G L +A L +P + N V W
Sbjct: 484 SSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQ-PNAVIW 542
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
S+L+ + N A + L E N+++DS
Sbjct: 543 GSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDS 586
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 246/700 (35%), Positives = 363/700 (51%), Gaps = 84/700 (12%)
Query: 28 LFNKY-VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
LFN + + S+N++I + D AL+ F M++L P TF + + S +
Sbjct: 84 LFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLI 143
Query: 87 HDLHSG-KQAHQQAFIFGFHRDVFVSSALIDMYSKCGE---------LSDARKLFDEIPQ 136
D + +Q H + F +G V +AL+ Y C ++ ARKLFDE P
Sbjct: 144 ADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPP 203
Query: 137 RIRNIVSWTSMLTGYVQNDN---AREALLLFKEFL----------------LEESECGGA 177
R+ +WT+++ GYV+ND+ ARE L + + EE+
Sbjct: 204 GRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLR 263
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE----VGVGNTLIDAY 233
+S + +D SV+SA S + + H +V++ + V N LI Y
Sbjct: 264 RMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLY 323
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSI-------------------------------IA 262
R G + +R+VFD M KD V+WN+I I+
Sbjct: 324 TRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMIS 383
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
AQNG E L +F+QM C+ A+ + + LG L G+ +H Q+I++ +
Sbjct: 384 GLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIA-SCSVLGSLDNGQQLHSQIIQLGHD 442
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
S+ VG ++I MY +CG V+ A F M + SW AMIA H +A+ L+ KM
Sbjct: 443 SSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKM 502
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
+K + P+ ITF+++LSACSHAGLV+EG H+ +TM + I P +HY ++DLL RAG
Sbjct: 503 LKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGM 562
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
EA ++ E M + +W +LL C IH N++LG AA +L EL P G ++ LSN+
Sbjct: 563 FSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNM 622
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
YA G+W++V R R LM+ R + K PG S +E+ VH FLV D HP+ +Y YLE+L
Sbjct: 623 YAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQL 682
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVC 604
+++++GYV D V+HD++ E+KE L HSEKLA NLR+C
Sbjct: 683 VHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFKNLRIC 742
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
GDCH + ISKVVDREI+VRD KRFH+F++G CSC +YW
Sbjct: 743 GDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 189/436 (43%), Gaps = 77/436 (17%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
D+ ++ ++ YS G + A +LF+ P IR+ VS+ +M+T + + + AL LF +
Sbjct: 61 DIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQ 120
Query: 167 F--------------------LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
L+ + E + + ++++ SVL+A V+
Sbjct: 121 MKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180
Query: 207 TEGAHGFVI-----KRGFDSEVGVG-------NTLIDAYARGGHVDVSRKVFDGMIEKDA 254
+ + ++ FD E G T+I Y R + +R++ +GM + A
Sbjct: 181 SSPLVNSCVLMAAARKLFD-EAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIA 239
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
V WN++I+ Y G EA D+ +M S ++ + T ++V+ A ++ G+ +G+ +H
Sbjct: 240 VAWNAMISGYVHRGFYEEAFDLLRRM-HSLGIQLDEYTYTSVISAASNAGLFNIGRQVHA 298
Query: 315 QVIKMDLEES----VIVGTSIIDMYCKCGQVDLARKAFNQM------------------- 351
V++ ++ S + V ++I +Y +CG++ AR+ F++M
Sbjct: 299 YVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNAR 358
Query: 352 ---------KEKNVRS---WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+E VRS WT MI+G + E L LF +M G+ P + ++
Sbjct: 359 RIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIA 418
Query: 400 ACSHAGLVQEGWHW---LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+CS G + G + +GH+ ++ G ++ + R G L EA D +
Sbjct: 419 SCSVLGSLDNGQQLHSQIIQLGHDSSLSVG----NALITMYSRCG-LVEAADTVFLTMPY 473
Query: 457 ADFVVWGSLLGACRIH 472
D V W +++ A H
Sbjct: 474 VDSVSWNAMIAALAQH 489
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/571 (38%), Positives = 333/571 (58%), Gaps = 45/571 (7%)
Query: 102 FGFHRDVFVSSALIDM--YSKCGELSDARKLFDEI--PQRIRNIVSWTSMLTGYVQNDNA 157
FG H + +S L++ S G L+ A+ +F I PQ +W SM+ G+ Q+ +
Sbjct: 425 FGPH-NPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNPQ----TPAWNSMIRGFSQSPSP 479
Query: 158 RE--ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+ A++ + L ++ + D+ + +L AC G HGF+I
Sbjct: 480 LQLQAIVFYNHML-----------SASHARPDTYTFSFLLKACEEAKEEGKCREVHGFII 528
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+ G+D +V + LI +YA G ++ + KVF+ M +D V+WNS+I+ Y Q GL EAL
Sbjct: 529 RFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALK 588
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
++DQM + ++V + TL ++L + AH+G L +G +H + L E++ VG ++IDMY
Sbjct: 589 MYDQM-RISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMY 647
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG + A FN M +++V +W +MI GYG+H R EA+ F M+ AGVRPN ITF+
Sbjct: 648 AKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFL 707
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
+L CSH GLV+EG + + M EFN++PG++HYGCMVDL GRAGKLKEA ++I
Sbjct: 708 GLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPS 767
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
+ D V+W +LLG+C+IH+NV++GE+A + L +L G VLLS IYA A + V R
Sbjct: 768 QHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARM 827
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
R L+++R + TPG+S +E+ +VH F+V DK HP +IY LEE+ + VGY +
Sbjct: 828 RKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEE 887
Query: 576 TSVIHDVDQEEK----EMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
+S++ + + E + HSEKLA NLRVC DCH +
Sbjct: 888 SSLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCHNFTKF 947
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+SK DREI+VRD RFH+F+ G CSC ++W
Sbjct: 948 VSKAFDREIIVRDRVRFHHFRGGHCSCKEFW 978
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 153/309 (49%), Gaps = 19/309 (6%)
Query: 40 SWNSVIADLARGGDSVE--ALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+WNS+I ++ ++ A+ ++ M S P TF +K+C + ++ H
Sbjct: 465 AWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVH 524
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
FG+ +DV + + LI Y+ G + A K+F+E+P R++VSW SM++ Y Q
Sbjct: 525 GFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPA--RDLVSWNSMISCYCQTGL 582
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EAL ++ + + NV D + S+LS+C+ V + H F +
Sbjct: 583 HEEALKMYDQMRI------------SNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGE 630
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
R + VGN LID YA+ G + + +F+ M ++D TWNS+I Y +G EA+
Sbjct: 631 RRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITF 690
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMY 335
F M+ + V+ N++T +L +H G+++ G + H + +L+ + ++D++
Sbjct: 691 FGSMLMA-GVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLF 749
Query: 336 CKCGQVDLA 344
+ G++ A
Sbjct: 750 GRAGKLKEA 758
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 26/290 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SWNS+I+ + G EAL+ + MR ++ T + SC+ + LH G Q H
Sbjct: 566 DLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMH 625
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+ A ++FV +ALIDMY+KCG L+ A +F+ +P+ R++ +W SM+ GY +
Sbjct: 626 RFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPK--RDVFTWNSMIVGYGVHGR 683
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF-VI 215
EA+ F L+ V +S+ +L CS + V EG F ++
Sbjct: 684 GDEAITFFGSMLMA------------GVRPNSITFLGLLCGCSHQGL--VKEGVQYFHMM 729
Query: 216 KRGFDSEVGVGN--TLIDAYARGGHVDVSRKVF-DGMIEKDAVTWNSIIA---IYAQNGL 269
F+ + G+ + ++D + R G + + +V + D V W +++ I+ +
Sbjct: 730 SSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEI 789
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL-GVLRLGKCIHDQVIK 318
A+ Q+ C V LS + L GV R+ K I + IK
Sbjct: 790 GEMAMRNLVQLGSLGAGDC--VLLSGIYAEAKDLQGVARMRKLIQSRGIK 837
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++FN + K +VF+WNS+I G EA+ F SM + P TF + CS
Sbjct: 658 SIFNS-MPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQ 716
Query: 87 HDLHSGKQA-HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ G Q H + F + ++D++ + G+L +A ++ P + + V W
Sbjct: 717 GLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQ-HDPVLWR 775
Query: 146 SML 148
++L
Sbjct: 776 TLL 778
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/638 (35%), Positives = 354/638 (55%), Gaps = 37/638 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
L + + + ++ SWNS++A + G + AL+ F+ M + TF A+ +C
Sbjct: 317 LIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPE 376
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+GK H + G ++ + + LI Y KC ++++A+K+F +P+ + V+W ++
Sbjct: 377 FFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDK--VTWNAL 434
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC---SRVTVN 204
+ G+ N EA+ FK L+ E G VD + I ++L +C +
Sbjct: 435 IGGFANNAELNEAVAAFK--LMREGSTSG---------VDYITIVNILGSCLTHEDLIKY 483
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
G+ AH V GFD + V ++LI YA+ G + S +FD ++ K + WN+IIA
Sbjct: 484 GIPIHAHTVVT--GFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAAN 541
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
A+ G EAL + +M +S ++ + S L A L +L G+ +H IK+ E
Sbjct: 542 ARYGFGEEALKLVVRM-RSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELD 600
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+ + +DMY KCG++D A + Q +++ SW +I+ H + +A + F+ M+K
Sbjct: 601 HFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLK 660
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
GV+PN+++FV +LSACSH GLV EG + +M + I+PG+EH CM+DLLGR+G+L
Sbjct: 661 LGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLV 720
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
EA I M + + +VW SLL +CRI++N+DLG AAK L EL+P++ +VL SN++A
Sbjct: 721 EAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFA 780
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
GRWEDVE R M ++ K P S V+ +G + F +GD+ HPQ E+I L L
Sbjct: 781 TIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMK 840
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
+ E GYV D + + D D+E+KE + HSE++A NLRVCGD
Sbjct: 841 IVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGD 900
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH+ + +S V+ R+IV+RD RFH+F +G CSC DYW
Sbjct: 901 CHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 237/491 (48%), Gaps = 30/491 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ ++N SWN +++ R G VEA+ F + + + P+ + +C+
Sbjct: 14 VFDRMSERNEA-SWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLVTACNKSS 72
Query: 88 DL-HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ G Q H A G DVFV ++ + Y+ G +S+A+K+F+E+P RN+VSWTS
Sbjct: 73 IMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPD--RNVVSWTS 130
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ Y N + +E + +K E C N +N IA V+S+C + +
Sbjct: 131 LMVSYSDNGSKKEVINTYKRMRHEGICC-----NENN-------IALVISSCGFLMDIIL 178
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
G +K G +++V N+LI + G ++ + +F+ M E+D ++WNSII+ AQ
Sbjct: 179 GHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQ 238
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
N L E+ F M + + N TLS +L + L+ GK +H +K LE ++
Sbjct: 239 NTLHEESFRYFHWM-RLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNIC 297
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
+ +++ +Y G+ A F +M E+++ SW +M+A Y R AL +F +M+
Sbjct: 298 LCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMK 357
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGK 442
NY+TF S L+AC G + H F + G++ ++ G+ K
Sbjct: 358 KEINYVTFTSALAACLDPEFFTNG-----KILHGFVVVLGLQDELIIGNTLITFYGKCHK 412
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE-IAAKKLFELEPNNCGYHVLLSN 501
+ EA + + M K D V W +L+G N +L E +AA KL + ++ + N
Sbjct: 413 MAEAKKVFQRMP-KLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTSGVDYITIVN 469
Query: 502 IYANAGRWEDV 512
I + ED+
Sbjct: 470 ILGSCLTHEDL 480
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 180/362 (49%), Gaps = 29/362 (8%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MYSK G ++ A+ +FD + + RN SW M++GYV+ + EA+L F++ CG
Sbjct: 1 MYSKFGRINYAQLVFDRMSE--RNEASWNHMMSGYVRVGSYVEAVLFFRDI------CGI 52
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYA 234
+ S IAS+++AC++ ++ EG HGF IK G +V VG + + YA
Sbjct: 53 GIKPS------GFMIASLVTACNKSSIMA-KEGFQFHGFAIKCGLIYDVFVGTSFVHFYA 105
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
G V ++K+F+ M +++ V+W S++ Y+ NG E ++ + +M + + CN ++
Sbjct: 106 SYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRM-RHEGICCNENNIA 164
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
V+ + L + LG + +K LE V S+I M+ CG ++ A FN+M E+
Sbjct: 165 LVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNER 224
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
+ SW ++I+ + E+ F+ M NY T +LS C ++ G
Sbjct: 225 DTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWG---- 280
Query: 415 NTMGHEFNIEPGVEHYGCMVDLL----GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
H ++ G+E C+ + L AG+ K+A +LI + D + W S+L AC
Sbjct: 281 -KGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDA-ELIFRRMPERDLISWNSML-ACY 337
Query: 471 IH 472
+
Sbjct: 338 VQ 339
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/566 (39%), Positives = 322/566 (56%), Gaps = 69/566 (12%)
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF------------VD 187
N++ + + +QN N L ++ + S SEN +N F D
Sbjct: 65 NLLHYAIRVASQIQNPN----LFIYNALIRGCS----TSENPENSFHYYIKALRFGLLPD 116
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
++ ++ AC+++ + HG IK GF+ + V N+L+ YA G ++ +R VF
Sbjct: 117 NITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQ 176
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM--------------------------- 280
M D V+W +IA Y + G A A ++FD+M
Sbjct: 177 RMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVET 236
Query: 281 ---VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
+++ V N + V+ + AHLG L +G+ H+ V++ L ++I+GT+++DMY +
Sbjct: 237 FEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYAR 296
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
CG V+ A F Q+ EK+V WTA+IAG MH A +AL F +M K G P ITF +V
Sbjct: 297 CGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAV 356
Query: 398 LSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
L+ACSHAG+V+ G +M + +EP +EHYGCMVDLLGRAGKL++A + M VK
Sbjct: 357 LTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKP 416
Query: 458 DFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRS 517
+ +W +LLGACRIHKNV++GE K L E++P G++VLLSNIYA A +W+DV R
Sbjct: 417 NAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQ 476
Query: 518 LMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV-KLQEVGYVTDMT 576
+MK++ + K PG+SL+E+ GKVH F +GDK HP+ EKI E++ + K++ GYV +
Sbjct: 477 MMKDKGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGNTA 536
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
+ D+D+EEKE L HSEKLA NLRVC DCHT +LISKV
Sbjct: 537 ETMFDIDEEEKEGALHRHSEKLAIAYGIMKIRAPTPIRIVKNLRVCEDCHTATKLISKVF 596
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
+ E++VRD RFH+FK+G CSC DYW
Sbjct: 597 EVELIVRDRNRFHHFKEGTCSCMDYW 622
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 177/371 (47%), Gaps = 50/371 (13%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ N+F +N++I + + + + + L P T P +K+C+ L + G
Sbjct: 77 IQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMG 136
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYS-------------------------------KC 121
Q H QA GF +D +V ++L+ MY+ +C
Sbjct: 137 MQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRC 196
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G+ AR+LFD +P+ RN+V+W++M++GY +N+ +A+ F+ +
Sbjct: 197 GDAKSARELFDRMPE--RNLVTWSTMISGYARNNCFEKAVETFEAL------------QA 242
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
+ V + + V+S+C+ + + E AH +V++ + +G ++D YAR G+V+
Sbjct: 243 EGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEK 302
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ VF+ + EKD + W ++IA A +G A +AL F +M K V +T +AVL A +
Sbjct: 303 AVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVP-RDITFTAVLTACS 361
Query: 302 HLGVLRLGKCIHDQVIKMD--LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRS 358
H G++ G I + +K D +E + ++D+ + G++ A K +M K N
Sbjct: 362 HAGMVERGLEIFES-MKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPI 420
Query: 359 WTAMIAGYGMH 369
W A++ +H
Sbjct: 421 WRALLGACRIH 431
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 12/153 (7%)
Query: 2 KLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
KLS + + + V ++ N + + + + +V W ++IA LA G + +AL F
Sbjct: 279 KLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYF 338
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSAL------I 115
S M K P TF + +CS H+G RD V L +
Sbjct: 339 SEMAKKGFVPRDITFTAVLTACS-----HAGMVERGLEIFESMKRDHGVEPRLEHYGCMV 393
Query: 116 DMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
D+ + G+L A K ++P + N W ++L
Sbjct: 394 DLLGRAGKLRKAEKFVLKMPVK-PNAPIWRALL 425
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/576 (38%), Positives = 330/576 (57%), Gaps = 51/576 (8%)
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
H+D FV L+ + S + A K+F N+ +T+++ G V + + + L+
Sbjct: 61 HQDPFVVFELLRVCSNLNSIGYASKIFSHTQNP--NVYLYTALIDGLVLSCYYTDGIHLY 118
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
+ + + ++ DS A+ SVL AC H V+K G S
Sbjct: 119 YQMI------------NSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRS 166
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIE------------------KDAVTWNSIIAIYAQ 266
+ LI+ Y + G + +R+VFD M E KD V W ++I +
Sbjct: 167 IRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVR 226
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG + AL+VF M + DV N VT+ VL A + LG L+LG+ + + K +E +
Sbjct: 227 NGESNRALEVFRNMQRE-DVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHF 285
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
VG ++I+MY +CG +D A++ F QMKEKNV ++ +MI G+ +H ++ EA++LF +IK G
Sbjct: 286 VGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQG 345
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
P+ +TFV VL+ACSH GL + G+ ++M ++ IEP +EHYGCMVDLLGR G+L+EA
Sbjct: 346 FTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEA 405
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
Y I MKV D V+ G+LL AC+IH N++L E AK L + + G ++LLSN Y+++
Sbjct: 406 YSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSS 465
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
G+W++ R+ M+ + K PG S +E+ ++H FL+GD HPQ EKIY+ LEELN L
Sbjct: 466 GKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQIL 525
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+ GY V+HD+++ EKE L IHSE+LA NLRVC DCH
Sbjct: 526 RLEGYTPATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTLRVVKNLRVCNDCH 585
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+LIS + R+IVVRD RFH+F++G+CSCGDYW
Sbjct: 586 LTIKLISNITRRKIVVRDRNRFHHFENGVCSCGDYW 621
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 37/416 (8%)
Query: 32 YVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS 91
+ NV+ + ++I L + + + M SL P +K+C L
Sbjct: 89 HTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKE 148
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR-------------- 137
G++ H Q G + + LI++Y KCG DAR++FDE+P+R
Sbjct: 149 GREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFD 208
Query: 138 --IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
I++ V WT+M+ G V+N + AL +F+ ++V + V I VL
Sbjct: 209 HGIKDTVCWTAMIDGLVRNGESNRALEVFRNM------------QREDVMPNEVTIVCVL 256
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
SACS + + ++ K + VG LI+ Y+R G +D +++VF+ M EK+ +
Sbjct: 257 SACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVI 316
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHD 314
T+NS+I +A +G + EA+++F ++K ++VT VL A +H G+ LG + H
Sbjct: 317 TYNSMIMGFALHGKSVEAVELFRGLIKQGFTP-SSVTFVGVLNACSHGGLAELGFEIFHS 375
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
+E + ++D+ + G+++ A MK V M+ C+
Sbjct: 376 MAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMK---VAPDHVMLGALLSACKIHG 432
Query: 375 ALDLFYKMIKAGV---RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE-FNIEPG 426
L+L ++ K+ V + T++ + +A S +G +E M E EPG
Sbjct: 433 NLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPG 488
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
I+ ++I+ + V ++ + + A K F+ + NV +TA+I G + C
Sbjct: 51 IYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCY 110
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
+ + L+Y+MI + + P+ SVL AC ++EG
Sbjct: 111 YTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEG 149
>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
Length = 660
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/566 (40%), Positives = 332/566 (58%), Gaps = 40/566 (7%)
Query: 104 FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
F D F+S+ LID Y+ GEL AR++FDE P +++I W ++L D+ EAL
Sbjct: 110 FRSDPFLSTRLIDAYASLGELPAARQVFDEAP--VKSIFVWNALLKALALADHGEEALAR 167
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSAC-----SRVTVNGVTEGAHGFVIKRG 218
A V VDS + A L AC S V + + H ++RG
Sbjct: 168 L------------ADMGRLRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRG 215
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
+ V TLID YA+ G V + VF M E++ V+W ++I YA+N +A+ +F
Sbjct: 216 YGLHTHVATTLIDCYAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQ 275
Query: 279 QMVKS-TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
+MV S D+ N+VT+ +L A A + L GK +H +++ + V V +++ MY K
Sbjct: 276 EMVASDEDLVPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNALMAMYMK 335
Query: 338 CGQVDLARKAFNQM-KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
CG ++ R F+ + K+V SW +I+GYGMH EA+ +F M + GV PN ITF+S
Sbjct: 336 CGCLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFIS 395
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VL ACSHAGLV EG +M ++N+ P EHY CMVDLLGRAG L EA +LI+GM ++
Sbjct: 396 VLGACSHAGLVDEGKRLFESMV-DYNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIR 454
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
VWGSLLGACRIH++V+ E+A +LF+LEP N G +VLL++IYA A +V +
Sbjct: 455 PSPQVWGSLLGACRIHRHVEYAEMACSQLFDLEPRNAGNYVLLADIYARAKLHSEVGVLK 514
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
L++ L K PG S +E++ ++H F+ D ++PQ E++ + E +++ GYV D
Sbjct: 515 DLLEEHALEKVPGCSWIEVKKRLHMFVSVDNKNPQIEELQALIGEFVTQMKNDGYVPDTG 574
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
+V++D+++EEKE L HSEKLA NLR+C DCH+V + ISK
Sbjct: 575 AVLYDIEEEEKEKILLGHSEKLAVAFGLINTGRGEVIRITKNLRLCEDCHSVTKFISKYA 634
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
+REI+VRD RFH+F+DG+CSCGDYW
Sbjct: 635 EREIIVRDVNRFHHFRDGICSCGDYW 660
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 173/340 (50%), Gaps = 20/340 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA- 95
++F WN+++ LA EAL + M +L + ++ +K+C A H A
Sbjct: 144 SIFVWNALLKALALADHGEEALARLADMGRLRVPVDSYSYAHGLKACIAASTSHVPASAL 203
Query: 96 ----HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
H A G+ V++ LID Y+K G +S A +F +P+ RN+VSWT+M+ Y
Sbjct: 204 VREIHAHAVRRGYGLHTHVATTLIDCYAKLGIVSYAESVFATMPE--RNVVSWTAMIGCY 261
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+N+ +A+LLF+E + + +++ +SV I +L A + V G + H
Sbjct: 262 AKNERPGDAILLFQEMVASD----------EDLVPNSVTIVCILHAFAGVNALGQGKLLH 311
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLA 270
++++RGFDS V V N L+ Y + G ++ R +FD + KD V+WN++I+ Y +G
Sbjct: 312 AYILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFG 371
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA+ VF+ M + V N +T +VL A +H G++ GK + + ++ ++
Sbjct: 372 HEAVQVFEDMTQ-MGVSPNIITFISVLGACSHAGLVDEGKRLFESMVDYNVTPRAEHYAC 430
Query: 331 IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + G +D A + M + + W +++ +H
Sbjct: 431 MVDLLGRAGHLDEAVELIQGMHIRPSPQVWGSLLGACRIH 470
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 32/240 (13%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPCAIKSCSALHDLH 90
+ + NV SW ++I A+ +A+ F M L P T C + + + ++ L
Sbjct: 246 MPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNSVTIVCILHAFAGVNALG 305
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
GK H GF V V +AL+ MY KCG L R +FD I R +++VSW ++++G
Sbjct: 306 QGKLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIFDLIGHR-KDVVSWNTLISG 364
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y + EA+ +F E+ G S N + SVL ACS + V EG
Sbjct: 365 YGMHGFGHEAVQVF-----EDMTQMGVSPN-------IITFISVLGACSHAGL--VDEG- 409
Query: 211 HGFVIKRGFDSEVGVGNT--------LIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
KR F+S V T ++D R GH+D + ++ GM I W S++
Sbjct: 410 -----KRLFESMVDYNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIRPSPQVWGSLL 464
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ + +V SWN++I+ G EA++ F M ++ ++P TF + +CS
Sbjct: 345 IFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFISVLGACSHAG 404
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ GK+ + + + ++D+ + G L +A +L + R V W S+
Sbjct: 405 LVDEGKRLFESMVDYNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIRPSPQV-WGSL 463
Query: 148 L 148
L
Sbjct: 464 L 464
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/615 (36%), Positives = 347/615 (56%), Gaps = 43/615 (6%)
Query: 58 LRAFSSMRKLSLTPTR----------STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRD 107
+ F+S + L+P R S F ++ C+ + K H + D
Sbjct: 38 ISVFASYEQEELSPGRYSDEFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGD 97
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
V +S+ LI+ YSKCG + AR++FD + +R ++VSW +M+ Y +N EAL +F E
Sbjct: 98 VTLSNVLINAYSKCGFVELARQVFDGMLER--SLVSWNTMIGLYTRNRMESEALDIFWEM 155
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN 227
++ I+SVLSAC + H +K D + VG
Sbjct: 156 ------------RNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGT 203
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
L+D YA+ G ++ + +VF+ M +K +VTW+S++A Y Q+ EAL ++ + + ++
Sbjct: 204 ALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRR-AQRMSLE 262
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
N TLS+V+ A ++L L GK +H + K +V V +S +DMY KCG + +
Sbjct: 263 QNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYII 322
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F++++EKN+ W +I+G+ H R +E + LF KM + G+ PN +TF S+LS C H GLV
Sbjct: 323 FSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 382
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+EG + M + + P V HY CMVD+LGRAG L EAY+LI+ + + +WGSLL
Sbjct: 383 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLA 442
Query: 468 ACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKT 527
+CR+ KN++L E+AAKKLFELEP N G HVLLSNIYA +WE++ ++R L+++ + K
Sbjct: 443 SCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKV 502
Query: 528 PGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEK 587
G S ++++ KVH F VG+ HP+ +I L+ L ++L++ GY + +HDV+ +K
Sbjct: 503 RGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIGKK 562
Query: 588 EMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
E L HSEKLA NLR+C DCH ++ S R I+VRD+ R
Sbjct: 563 EELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDANR 622
Query: 630 FHYFKDGLCSCGDYW 644
FH+F DG CSCG++W
Sbjct: 623 FHHFSDGHCSCGEFW 637
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 190/387 (49%), Gaps = 35/387 (9%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLT-TLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
M+L ++S+V+ N L +F+ ++++ V SWN++I R EAL
Sbjct: 92 MELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLV-SWNTMIGLYTRNRMESEALD 150
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
F MR + T + +C A D K+ H + +++V +AL+D+Y+
Sbjct: 151 IFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYA 210
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK---EFLLEESECGG 176
KCG ++DA ++F+ + ++ V+W+SM+ GYVQ+ N EALLL++ LE+++
Sbjct: 211 KCGMINDAVQVFESMQD--KSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQ--- 265
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
++SV+ ACS + + H + K GF S V V ++ +D YA+
Sbjct: 266 ------------FTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKC 313
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G + S +F + EK+ WN+II+ +A++ E + +F++M + + N VT S++
Sbjct: 314 GSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKM-QQDGMHPNEVTFSSL 372
Query: 297 LLAIAHLGVLRLGKCIHDQV-IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK--- 352
L H G++ G+ + L +V+ + ++D+ G+ L +A+ +K
Sbjct: 373 LSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDIL---GRAGLLSEAYELIKSIP 429
Query: 353 -EKNVRSWTAMIAGYGMHCRAREALDL 378
E W +++A CR + L+L
Sbjct: 430 FEPTASIWGSLLAS----CRVCKNLEL 452
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/455 (44%), Positives = 287/455 (63%), Gaps = 21/455 (4%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +++ G + V +LI Y+ G VD++R +F M E++ ++W+ +I Y + G
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQY 146
Query: 271 AEALDVFD--QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
EAL +F QM+ DV+ N T+S VL A LG L GK H + K + V++G
Sbjct: 147 KEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLG 206
Query: 329 TSIIDMYCKCGQVDLARKAFNQM-KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
T++IDMY KCG V+ A F+ + K+V +W+AMI+G MH A E + LF KMI GV
Sbjct: 207 TALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGV 266
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
RPN +TF++V AC H GLV EG +L M +++I P ++HYGCMVDL GRAG++KEA+
Sbjct: 267 RPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAW 326
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
++++ M ++ D +VWG+LL R+H +++ E+A KKL ELEP N G +VLLSN+YA G
Sbjct: 327 NVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRG 386
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RWEDV R LM+ + K PG SL+E+ G +H F VGD HP+ +I+ LEE+ +L+
Sbjct: 387 RWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLK 446
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV + V+ D+D+E KE+ L +HSEKLA NLR+C DCH
Sbjct: 447 VEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHV 506
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I++ISKV DREI+VRD RFH+F GLCSC DYW
Sbjct: 507 AIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 541
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 177/342 (51%), Gaps = 26/342 (7%)
Query: 39 FSWNSVI-----ADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
F WN++I A G + + F MR + P TFP ++S ++ LH G+
Sbjct: 25 FLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGR 84
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H Q FG D FV ++LI MYS G + AR LF +P+ RN++SW+ M+ GYV+
Sbjct: 85 SVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPE--RNVISWSCMINGYVR 142
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+EAL LF+E + G ++ N F ++ VL+AC R+ + AH +
Sbjct: 143 CGQYKEALALFREM-----QMLGVNDVRPNEF----TMSGVLAACGRLGALEHGKWAHAY 193
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAE 272
+ K G +V +G LID YA+ G V+ + VF + KD + W+++I+ A +GLA E
Sbjct: 194 IDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEE 253
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS-- 330
+ +F +M+ + V+ NAVT AV A H G++ GK D + +M + S+I
Sbjct: 254 CVGLFSKMI-NQGVRPNAVTFLAVFCACVHGGLVSEGK---DYLRRMTEDYSIIPTIQHY 309
Query: 331 --IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+Y + G++ A M E +V W A+++G MH
Sbjct: 310 GCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMH 351
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 16/231 (6%)
Query: 253 DAVTWNSIIAIYAQ-----NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
++ WN++I + Q G + +F +M + V+ + T +L + A +L
Sbjct: 23 ESFLWNTLIRAHVQARAQPTGPTHSPISIFVRM-RFHGVQPDFHTFPFLLQSFASPSLLH 81
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
LG+ +H Q+++ L V TS+I MY G VD+AR F M E+NV SW+ MI GY
Sbjct: 82 LGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYV 141
Query: 368 MHCRAREALDLFYKMIKAG---VRPNYITFVSVLSACSHAGLVQEG-W--HWLNTMGHEF 421
+ +EAL LF +M G VRPN T VL+AC G ++ G W +++ G
Sbjct: 142 RCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPV 201
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++ G ++D+ + G +++A + + D + W +++ +H
Sbjct: 202 DVVLGT----ALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMH 248
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 40/246 (16%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT---PTRSTFPCAIKSCSALHDL 89
+ + NV SW+ +I R G EAL F M+ L + P T + +C L L
Sbjct: 125 MPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGAL 184
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
GK AH G DV + +ALIDMY+KCG + A +F + +++++W++M++
Sbjct: 185 EHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPN-KDVMAWSAMIS 243
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
G + A E + LF + + + V ++V +V AC
Sbjct: 244 GLAMHGLAEECVGLFSKMI------------NQGVRPNAVTFLAVFCAC----------- 280
Query: 210 AHGFVIKRGFD------------SEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVT 256
HG ++ G D + ++D Y R G + + V M +E D +
Sbjct: 281 VHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLV 340
Query: 257 WNSIIA 262
W ++++
Sbjct: 341 WGALLS 346
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/539 (40%), Positives = 327/539 (60%), Gaps = 30/539 (5%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L+ AR LFD +P+R + SW+++++ + ++ R AL +++ L E G DN
Sbjct: 109 LASARALFDRMPRR--DHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAG-----VDN 161
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
F S A+A+ +A + H V++RG D++ V + L D YA+ G VD +R
Sbjct: 162 EFTASSALAAATAARCARAGREL----HCHVVRRGIDADAVVWSALADMYAKCGRVDDAR 217
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VFD M +D V+W +++ Y E +F +M++S ++ N T + VL A A
Sbjct: 218 SVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRS-GIQPNEFTYAGVLRACAEF 276
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
+LGK +H ++ K +S ++++ MY K G + A + F M + ++ SWTAMI
Sbjct: 277 TSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMI 336
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
+GY + + EAL F ++++G RP+++TFV VLSAC+HAGLV +G +++ E+ I
Sbjct: 337 SGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGI 396
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
E +HY C++DLL R+G + A ++I M VK + +W SLLG CRIHKNV L AA+
Sbjct: 397 EHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAE 456
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
LFE+EP N +V L+NIYA+ G +++VE TR +M+ + + K P S +E+ ++H FL
Sbjct: 457 ALFEIEPENPATYVTLANIYASVGLFDEVENTRRIMELKGITKMPASSWIEVGTRMHVFL 516
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
VGDK HPQ E++Y L++L VK++E GYV D V+HDV+ E+K+ + HSE+LA
Sbjct: 517 VGDKLHPQAEQVYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFG 576
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCHT I+LISK+V REI+VRDS RFH+FK+G CSC DYW
Sbjct: 577 IIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 182/392 (46%), Gaps = 30/392 (7%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSA 85
LF++ + + + FSW+++++ AR G AL + M R+ + F + +A
Sbjct: 114 ALFDR-MPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALAAA 172
Query: 86 LHDLHS--GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ G++ H G D V SAL DMY+KCG + DAR +FD +P +R++VS
Sbjct: 173 TAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMP--VRDVVS 230
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
WT+M+ Y E LF L + + A VL AC+ T
Sbjct: 231 WTAMVERYFDARRDGEGFRLFVRML------------RSGIQPNEFTYAGVLRACAEFTS 278
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ + HG + K + L+ Y++ G + + +VF GM + D V+W ++I+
Sbjct: 279 EKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISG 338
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI-HDQVIKMDLE 322
YAQNG EAL FD +++S + + VT VL A AH G++ G I H + +E
Sbjct: 339 YAQNGQPDEALRYFDMLLRS-GCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIE 397
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCR---AREALDL 378
+ +ID+ + G + A + N M K N W +++ G +H AR A +
Sbjct: 398 HTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEA 457
Query: 379 FYKMIKAGVRP-NYITFVSVLSACSHAGLVQE 409
++ + P N T+V++ + + GL E
Sbjct: 458 LFE-----IEPENPATYVTLANIYASVGLFDE 484
>gi|356555295|ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Glycine max]
Length = 626
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/558 (36%), Positives = 336/558 (60%), Gaps = 32/558 (5%)
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
+RD F+ L+ Y G DA+KLFDE+P + + +SW S+++G+ + + L +F
Sbjct: 83 YRDGFIGDQLVSCYLNMGSTPDAQKLFDEMPHK--DSISWNSLVSGFSRIGDLGNCLRVF 140
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
E + + + + SV+SAC+ H +K G + EV
Sbjct: 141 YTMRYEMA-----------FEWNELTLLSVISACAFAKARDEGWCLHCCAVKLGMELEVK 189
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
V N I+ Y + G VD + K+F + E++ V+WNS++A++ QNG+ EA++ F+ M++
Sbjct: 190 VVNAFINMYGKFGCVDSAFKLFWALPEQNMVSWNSMLAVWTQNGIPNEAVNYFN-MMRVN 248
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+ + T+ ++L A L + RL + IH + L E++ + T+++++Y K G+++++
Sbjct: 249 GLFPDEATILSLLQACEKLPLGRLVEAIHGVIFTCGLNENITIATTLLNLYSKLGRLNVS 308
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
K F ++ + + + TAM+AGY MH +EA++ F ++ G++P+++TF +LSACSH+
Sbjct: 309 HKVFAEISKPDKVALTAMLAGYAMHGHGKEAIEFFKWTVREGMKPDHVTFTHLLSACSHS 368
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGS 464
GLV +G ++ M + ++P ++HY CMVDLLGR G L +AY LI+ M ++ + VWG+
Sbjct: 369 GLVMDGKYYFQIMSDFYRVQPQLDHYSCMVDLLGRCGMLNDAYRLIKSMPLEPNSGVWGA 428
Query: 465 LLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRL 524
LLGACR+++N++LG+ AA+ L L P++ +++LSNIY+ AG W D + R+LMK +
Sbjct: 429 LLGACRVYRNINLGKEAAENLIALNPSDPRNYIMLSNIYSAAGLWSDASKVRALMKTKVF 488
Query: 525 AKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQ 584
+ G S +E K+H F+V D HP +KI+ LEE+ K++EVG+V++ S++HDVD+
Sbjct: 489 IRNAGCSFIEHGNKIHRFVVDDYSHPDSDKIHRKLEEIMRKIKEVGFVSETESILHDVDE 548
Query: 585 EEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRD 626
E K + HSEK+A NLR+C DCH + +S + R I++RD
Sbjct: 549 EVKTDMINKHSEKIALAFGLLVSNADMPLVIIKNLRICLDCHNTAKFVSLIEKRTIIIRD 608
Query: 627 SKRFHYFKDGLCSCGDYW 644
SKRFH+F DGLCSC DYW
Sbjct: 609 SKRFHHFSDGLCSCADYW 626
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 190/390 (48%), Gaps = 36/390 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSAL 86
LF++ K+++ SWNS+++ +R GD LR F +MR +++ T I +C+
Sbjct: 108 LFDEMPHKDSI-SWNSLVSGFSRIGDLGNCLRVFYTMRYEMAFEWNELTLLSVISACAFA 166
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
G H A G +V V +A I+MY K G + A KLF +P+ +N+VSW S
Sbjct: 167 KARDEGWCLHCCAVKLGMELEVKVVNAFINMYGKFGCVDSAFKLFWALPE--QNMVSWNS 224
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
ML + QN EA+ F + + +F D I S+L AC ++ + +
Sbjct: 225 MLAVWTQNGIPNEAVNYFNMMRV------------NGLFPDEATILSLLQACEKLPLGRL 272
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
E HG + G + + + TL++ Y++ G ++VS KVF + + D V +++A YA
Sbjct: 273 VEAIHGVIFTCGLNENITIATTLLNLYSKLGRLNVSHKVFAEISKPDKVALTAMLAGYAM 332
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK--MDLEES 324
+G EA++ F V+ +K + VT + +L A +H G++ GK + Q++ ++
Sbjct: 333 HGHGKEAIEFFKWTVRE-GMKPDHVTFTHLLSACSHSGLVMDGK-YYFQIMSDFYRVQPQ 390
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCR-------AREAL 376
+ + ++D+ +CG ++ A + M E N W A++ CR +EA
Sbjct: 391 LDHYSCMVDLLGRCGMLNDAYRLIKSMPLEPNSGVWGALLGA----CRVYRNINLGKEAA 446
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
+ + + R NYI ++ SA AGL
Sbjct: 447 ENLIALNPSDPR-NYIMLSNIYSA---AGL 472
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/627 (34%), Positives = 347/627 (55%), Gaps = 34/627 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ W +++ G ++L+ S M P TF A+K+ L H K H
Sbjct: 211 DIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVH 270
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Q + D V L+ +Y++ G++SDA K+F+E+P+ ++V W+ M+ + QN
Sbjct: 271 GQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN--DVVPWSFMIARFCQNGF 328
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+A+ +F V + ++S+L+ C+ +G+ E HG V+K
Sbjct: 329 CNKAVDIFIRM------------REGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
GFD +V V N LID YA+ +D + K+F + K+ V+WN++I Y G +AL++
Sbjct: 377 VGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNM 436
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F + +++ V VT S+ L A A L + LG +H IK + + V V S+IDMY
Sbjct: 437 FREALRN-QVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYA 495
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG + +A+ FN+M+ +V SW A+I+GY H R+AL +F M + +PN +TF+
Sbjct: 496 KCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLG 555
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VLS CS+AGL+ +G +M + IEP +EHY CMV L GR+G+L +A +LIEG+ +
Sbjct: 556 VLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYE 615
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
++W ++L A N + +A+++ ++ P + +VLLSN+YA A +W +V R
Sbjct: 616 PSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIR 675
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
MK + + K PG S +E +G VH F VG +HP + I LE LN+K GYV D
Sbjct: 676 KSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRN 735
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA-------------------NLRVCGDCHTVIRLISKV 617
+V+ D+D EEK+ L +HSE+LA NLR+C DCH+ +++IS +
Sbjct: 736 AVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSI 795
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
V R++V+RD RFH+F G+CSC D+W
Sbjct: 796 VQRDLVIRDMNRFHHFHAGVCSCDDHW 822
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 179/348 (51%), Gaps = 34/348 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP-----CAIKS 82
+FN+ + KN+V W+ +IA + G +A+ F MR+ + P T CAI
Sbjct: 304 VFNE-MPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGK 362
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
CS L G+Q H GF DV+VS+ALID+Y+KC ++ A KLF E+ +N+V
Sbjct: 363 CSGL-----GEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSS--KNVV 415
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
SW +++ GY +AL +F+E L + V V V +S L AC+ +
Sbjct: 416 SWNTVIVGYENLGEGGKALNMFREAL------------RNQVSVTEVTFSSALGACASLA 463
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ HG IK V V N+LID YA+ G + V++ VF+ M D +WN++I+
Sbjct: 464 SMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALIS 523
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK-CIHDQVIKMDL 321
Y+ +GL +AL +FD M K +D K N +T VL ++ G++ G+ C + +
Sbjct: 524 GYSTHGLGRQALRIFDIM-KGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGI 582
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMK----EKNVRSWTAMIAG 365
E + T ++ ++ + GQ+D KA N ++ E +V W AM++
Sbjct: 583 EPCLEHYTCMVRLFGRSGQLD---KAMNLIEGIPYEPSVMIWRAMLSA 627
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 160/343 (46%), Gaps = 27/343 (7%)
Query: 68 SLTPTRSTFPC--------AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
S+ + S PC ++ C +D S K H G D+F ++ L++ Y
Sbjct: 36 SVQWSDSVVPCLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYV 95
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
K G DA LFDE+P+R N VS+ ++ GY D L +E E
Sbjct: 96 KAGFDKDALNLFDEMPER--NNVSYVTLTQGYACQDPVGLYSRLHRE----------GHE 143
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
+ +VF + + L + H ++K G+DS VG LI+AY+ G V
Sbjct: 144 LNPHVFTSFLKLFVSLDKAE------ICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSV 197
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
D +R VF+G++ KD V W I++ Y +NG ++L + +M + N T L A
Sbjct: 198 DSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMP-NNYTFDTALKA 256
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
LG K +H Q++K E VG ++ +Y + G + A K FN+M + +V W
Sbjct: 257 SIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
+ MIA + + +A+D+F +M + V PN T S+L+ C+
Sbjct: 317 SFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCA 359
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 134/296 (45%), Gaps = 23/296 (7%)
Query: 181 SDNVF--VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
SD+V +DS A ++L C R + + H ++K+G ++ N L++AY + G
Sbjct: 40 SDSVVPCLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGF 99
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
+ +FD M E++ V++ ++ YA + + ++ ++ + + N ++ L
Sbjct: 100 DKDALNLFDEMPERNNVSYVTLTQGYA----CQDPVGLYSRLHREGH-ELNPHVFTSFLK 154
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
L + +H ++K+ + + VG ++I+ Y CG VD AR F + K++
Sbjct: 155 LFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVV 214
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM- 417
W +++ Y + ++L L +M G PN TF + L A G +H+ ++
Sbjct: 215 WAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLG----AFHFAKSVH 270
Query: 418 ------GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+E + GV ++ L + G + +A+ + M K D V W ++
Sbjct: 271 GQILKTCYELDPRVGVG----LLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIA 321
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 240/694 (34%), Positives = 365/694 (52%), Gaps = 87/694 (12%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA- 95
+ S+N++I + G D AL F M++ P TF + + S + D Q
Sbjct: 103 DTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQML 162
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGE---------LSDARKLFDEIPQRIRNIVSWTS 146
H + G V++AL+ Y C ++ ARK+FDE P+ SWT+
Sbjct: 163 HCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTT 222
Query: 147 MLTGYVQNDN---AREAL--LLF--------------KEFLLEESECGGASENSDNVFVD 187
M+ GYV+ND+ ARE L L + + L EE+ +S + D
Sbjct: 223 MIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQED 282
Query: 188 SVAIASVLSAC----SRVTVNGVTEGAHGFVIKRGFDSE----VGVGNTLIDAYARGGHV 239
S++SAC ++ + HG++++ + + V N LI Y + +
Sbjct: 283 EYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRM 342
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIY-------------------------------AQNG 268
+R+VFD M +D ++WN++++ Y AQNG
Sbjct: 343 IEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNG 402
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
E L +F+QM KS ++ + + A + LG L G+ IH QVI++ + + G
Sbjct: 403 FGEEGLKLFNQM-KSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAG 461
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
++I MY +CG V+ A F M + SW AMIA H +A++LF +M+K +
Sbjct: 462 NALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDIL 521
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+ ITF+++L+AC+HAGL++EG H+ +TM + I PG +HY ++DLL RAG +A
Sbjct: 522 PDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQS 581
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
+I+ M +A +W +LL CRIH N++LG AA +L EL P G +++LSN+YA G+
Sbjct: 582 VIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQ 641
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
W++V R R LM+ R + K PG S VE+ VH FLV D HP+ + +Y YL++L ++++
Sbjct: 642 WDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKK 701
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
+GYV D V+HD++ E KE +L HSEKLA NLR+CGDCH
Sbjct: 702 LGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNA 761
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ ISKVV+REIVVRD KRFH+FK+G CSCG+YW
Sbjct: 762 FKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 113/502 (22%), Positives = 196/502 (39%), Gaps = 118/502 (23%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
+ H GF + F+ + LI++Y K ++ ARKLFD+IP+ +IV+ T++L+ Y
Sbjct: 24 ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPK--PDIVARTTLLSAY 81
Query: 152 VQNDNAREALLLFKEFLLEESEC------------GGASENSDNVFV---------DSVA 190
+ N + A LF L + G + N+FV D
Sbjct: 82 SSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFT 141
Query: 191 IASVLSACSRVT-VNGVTEGAHGFVIKRGFDSEVGVGN---------------------- 227
+SVLSA S + + H VIK G V N
Sbjct: 142 FSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMA 201
Query: 228 --------------------TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
T+I Y R + +R++ DG+ V WN++I+ Y +
Sbjct: 202 SARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRR 261
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA----HLGVLRLGKCIHDQVIKMDLEE 323
GL EA D F +M S ++ + T ++++ A +G+ G+ +H +++ +E
Sbjct: 262 GLYEEAFDTFRRM-HSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEP 320
Query: 324 S-----------------------------------VIVGTSIIDMYCKCGQVDLARKAF 348
S +I +++ Y +++ A F
Sbjct: 321 SHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIF 380
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
++M E+NV +WT MI+G + E L LF +M G+ P F ++ACS G +
Sbjct: 381 SEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLD 440
Query: 409 EGWH---WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
G + +GH+ + G ++ + R G ++ A + M D V W ++
Sbjct: 441 NGQQIHSQVIRLGHDSGLSAG----NALITMYSRCGVVESAESVFLTMPY-VDSVSWNAM 495
Query: 466 LGACRIHKNVDLGEIAAKKLFE 487
+ A H + + A +LFE
Sbjct: 496 IAALAQHGH----GVKAIELFE 513
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 23/260 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV +W +I+ LA+ G E L+ F+ M+ L P F AI +CS L L +G
Sbjct: 383 MPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNG 442
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H Q G + +ALI MYS+CG + A +F +P + VSW +M+
Sbjct: 443 QQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMP--YVDSVSWNAMIAALA 500
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+ + +A+ LF++ + E+ + D + ++L+AC+ + + EG H
Sbjct: 501 QHGHGVKAIELFEQMMKED------------ILPDRITFLTILTACNHAGL--IKEGRHY 546
Query: 213 F---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA---IYA 265
F + G LID R G ++ V M E A W +++A I+
Sbjct: 547 FDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHG 606
Query: 266 QNGLAAEALDVFDQMVKSTD 285
L +A D +++ D
Sbjct: 607 NMELGIQAADRLLELIPGQD 626
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 135/356 (37%), Gaps = 101/356 (28%)
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE---------- 251
T + H ++ GF + N LI+ Y + ++ +RK+FD + +
Sbjct: 19 TTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLL 78
Query: 252 -----------------------KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
+D V++N++I Y+ AL++F QM K
Sbjct: 79 SAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQM-KRYGFLP 137
Query: 289 NAVTLSAVLLAIAHLG-VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL---- 343
+ T S+VL A++ + R + +H +VIK+ V +++ Y C L
Sbjct: 138 DPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSS 197
Query: 344 -----ARKAFNQMKEKNV--RSWTAMIAGY------------------------------ 366
ARK F++ + + SWT MIAGY
Sbjct: 198 QLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISG 257
Query: 367 ----GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
G++ EA D F +M G++ + T+ S++SAC G E N G + +
Sbjct: 258 YVRRGLY---EEAFDTFRRMHSMGIQEDEYTYTSLISAC---GSCNEKMGMFNC-GRQVH 310
Query: 423 -------IEPGVEHY-----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+EP H+ ++ + ++ EA + + M V+ D + W ++L
Sbjct: 311 GYILRTVVEPS-HHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVL 364
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/633 (36%), Positives = 364/633 (57%), Gaps = 41/633 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSL----TPTRS-TFPCAIKSCSALHDLHS 91
NV SWN ++ AR G EA AF +R++ + P T + CS L +L
Sbjct: 233 NVVSWNVMLGGYARNG---EAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAK 289
Query: 92 GKQAHQQAFIFGFH-RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
++ H G H V +ALI Y +CG L A ++FD I ++ + SW +++
Sbjct: 290 LRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKM--VSSWNALIGA 347
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
+ QN A A+ LF+E + CG D +I S+L AC + + A
Sbjct: 348 HAQNGEASAAIELFREM---TNACGQKP--------DWFSIGSLLLACGNLKHLLHGKAA 396
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HGF+++ G + + + +L+ Y + G ++R +FD + EKD V+WN++IA Y+QNGL
Sbjct: 397 HGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLP 456
Query: 271 AEALDVFDQM-VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
E+L +F +M K + + ++ L+A + L +RLGK +H +K DL E + +
Sbjct: 457 GESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSS 516
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
SIIDMY KCG VD AR F+++K K+ SWT MI GY ++ R +EA+ L+ KM + G+ P
Sbjct: 517 SIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEP 576
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ T++ +L AC HAG++++G + M + IE +EHY C++ +L RAG+ +A L
Sbjct: 577 DGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVAL 636
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
+E M + D + S+L AC +H V+LG+ A KL ELEP+ ++VL SN+YA + +W
Sbjct: 637 MEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQW 696
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
+++ + R ++++ +AK PG S +++ GKV++F+ G+ P+ K+ + L K++
Sbjct: 697 DEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAA 756
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GY D T ++H++++EEK LR HSEK A N+R+C DCH
Sbjct: 757 GYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAA 816
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LISKV DREIVVRD KRFH+F+DGLCSCGDYW
Sbjct: 817 KLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 195/378 (51%), Gaps = 14/378 (3%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N+ SWN+++A +A +E R + P +T + C+AL +G+ H
Sbjct: 129 NLVSWNALMAAVADPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVH 188
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI-RNIVSWTSMLTGYVQND 155
A G+ VS+ L+DMY+KCGE++DA F E P RN+VSW ML GY +N
Sbjct: 189 GLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNG 248
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
A A L +E +EE V D + + SVL CS + H FV+
Sbjct: 249 EAGAAFGLLREMQMEER----------GVPADEITMLSVLPVCSGLPELAKLRELHAFVV 298
Query: 216 KRGFD-SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+RG + V N LI AY R G + + +VFDG+ K +WN++I +AQNG A+ A+
Sbjct: 299 RRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAI 358
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
++F +M + K + ++ ++LLA +L L GK H +++ LE+ + S++ +
Sbjct: 359 ELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSV 418
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI--KAGVRPNYI 392
Y +CG+ LAR F+ ++EK+ SW MIAGY + E+L LF +M K G P+ +
Sbjct: 419 YIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLL 478
Query: 393 TFVSVLSACSHAGLVQEG 410
S L ACS V+ G
Sbjct: 479 AATSALVACSELPAVRLG 496
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 183/372 (49%), Gaps = 27/372 (7%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLS--LTPTRSTFPCAIKSCSALHDLHSGKQAHQQ 98
WN ++ADL+R G +AL + S + P R T P A+KSC G+Q H
Sbjct: 33 WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQVHAV 88
Query: 99 AFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA 157
A G D FV ++L+ MY +CG + DA K+F+ + RN+VSW +++ +
Sbjct: 89 AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAG--RNLVSWNALMAAVA---DP 143
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
R L LF++ L + GG + D + +VL C+ + HG +K
Sbjct: 144 RRGLELFRDCL---EDLGGTAAP------DEATLVTVLPMCAALAWPETGRAVHGLAVKS 194
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVF---DGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
G+D+ V N L+D YA+ G + + F ++ V+WN ++ YA+NG A A
Sbjct: 195 GWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAF 254
Query: 275 DVFDQM-VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE-ESVIVGTSII 332
+ +M ++ V + +T+ +VL + L L + +H V++ L +V ++I
Sbjct: 255 GLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALI 314
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA-GVRPNY 391
Y +CG + A + F+ + K V SW A+I + + A A++LF +M A G +P++
Sbjct: 315 AAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDW 374
Query: 392 ITFVSVLSACSH 403
+ S+L AC +
Sbjct: 375 FSIGSLLLACGN 386
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 157/369 (42%), Gaps = 42/369 (11%)
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++ W +L + +AL + L SD V D + L +C
Sbjct: 29 SLPQWNGLLADLSRAGRHADALAILPRLL----------AASDGVAPDRFTLPPALKSCR 78
Query: 200 RVTVNGVTEGAHGFVIKRGF-DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
V H K G D + VGN+L+ Y R G VD + KVF+GM ++ V+WN
Sbjct: 79 GDDGRQV----HAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWN 134
Query: 259 SIIAIYAQNGLAAEALDVFDQMVK--STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
+++A A L++F ++ + TL VL A L G+ +H
Sbjct: 135 ALMAAVAD---PRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLA 191
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE---KNVRSWTAMIAGYGMHCRAR 373
+K + + V ++DMY KCG++ A AF + +NV SW M+ GY + A
Sbjct: 192 VKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAG 251
Query: 374 EALDLF--YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
A L +M + GV + IT +SVL CS GL + L + H F + G+ G
Sbjct: 252 AAFGLLREMQMEERGVPADEITMLSVLPVCS--GLPELA--KLREL-HAFVVRRGLHLTG 306
Query: 432 CMVD-----LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI-AAKKL 485
MV GR G L A + +G+ K W +L+GA + GE AA +L
Sbjct: 307 DMVPNALIAAYGRCGCLLHACRVFDGICSKM-VSSWNALIGA-----HAQNGEASAAIEL 360
Query: 486 FELEPNNCG 494
F N CG
Sbjct: 361 FREMTNACG 369
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/593 (36%), Positives = 346/593 (58%), Gaps = 42/593 (7%)
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDE 133
ST+ + +C L + K+ GF D++V + ++ M+ KCG + DARKLFDE
Sbjct: 119 STYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDE 178
Query: 134 IPQRIRNIVSWTSMLTGYVQNDNAREALLLF----KEFLLEESECGGASENSDNVFVDSV 189
+P++ ++ SW +M+ G V N EA LF KEF ++ F
Sbjct: 179 MPEK--DVASWMTMVGGLVDTGNFSEAFRLFLCMWKEF----------NDGRSRTF---- 222
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
A+++ A + + + V + H +KRG + V LID Y++ G ++ + VFD M
Sbjct: 223 --ATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQM 280
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
EK V WNSIIA YA +G + EAL ++ +M + + + T+S V+ A L L
Sbjct: 281 PEKTTVGWNSIIASYALHGYSEEALSLYFEM-RDSGTTVDHFTISIVIRICARLASLEHA 339
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K H +++ ++ T+++D Y K G+++ AR FN+M+ KNV SW A+IAGYG H
Sbjct: 340 KQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNH 399
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
+ +EA+++F +M++ GV P ++TF++VLSACS++GL Q GW +M + ++P H
Sbjct: 400 GQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMH 459
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
Y CM++LLGR L EAY LI K +W +LL ACR+HKN++LG++AA+KL+ +E
Sbjct: 460 YACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYGME 519
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
P +++L N+Y ++G+ ++ +K + L P S VE++ + +AFL GDK H
Sbjct: 520 PEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDKSH 579
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
Q ++IY+ ++ L V++ + GY + +++ DVD+EE+ + L+ HSEKLA
Sbjct: 580 SQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEEEQRI-LKYHSEKLAIAFGLINTPH 638
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
RVCGDCH+ I+LI+ V REIVVRD+ RFH+F++G CSCGDYW
Sbjct: 639 WTPLQITQGHRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 204/436 (46%), Gaps = 63/436 (14%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ +K+ V SW +++ L G+ EA R F M K TF I++ + L
Sbjct: 175 LFDEMPEKD-VASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLG 233
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ GKQ H A G D FVS ALIDMYSKCG + DA +FD++P+ + V W S+
Sbjct: 234 LVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPE--KTTVGWNSI 291
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y + + EAL L+ E VD I+ V+ C+R+
Sbjct: 292 IASYALHGYSEEALSLYFEM------------RDSGTTVDHFTISIVIRICARLASLEHA 339
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ AH +++ GF +++ L+D Y++ G ++ +R VF+ M K+ ++WN++IA Y +
Sbjct: 340 KQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNH 399
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EA+++F+QM++ V VT AVL A ++ G+ + G I
Sbjct: 400 GQGQEAVEMFEQMLQE-GVTPTHVTFLAVLSACSYSGLSQRGWEI--------------- 443
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA-LDLFYKMIK-A 385
F MK + AM + RE+ LD Y +I+ A
Sbjct: 444 --------------------FYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTA 483
Query: 386 GVRPNYITFVSVLSACS-HAGLVQEGWHWLNTMGHE--FNIEP-GVEHYGCMVDLLGRAG 441
+P + ++L+AC H L L + E + +EP + +Y +++L +G
Sbjct: 484 PFKPTANMWAALLTACRMHKNLE------LGKLAAEKLYGMEPEKLCNYIVLLNLYNSSG 537
Query: 442 KLKEAYDLIEGMKVKA 457
KLKEA +++ +K K
Sbjct: 538 KLKEAAGILQTLKKKG 553
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 11/206 (5%)
Query: 272 EALDVFDQMVKSTD-VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA+++F+ + D A T A++ A L +R K + + +I E + V
Sbjct: 99 EAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNR 158
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ M+ KCG + ARK F++M EK+V SW M+ G EA LF M K
Sbjct: 159 VLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGR 218
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV--EHY-GC-MVDLLGRAGKLKEA 446
TF +++ A + GLVQ G H ++ GV +H+ C ++D+ + G +++A
Sbjct: 219 SRTFATMIRASAGLGLVQVG-----KQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDA 273
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIH 472
+ + + M K V W S++ + +H
Sbjct: 274 HCVFDQMPEKTT-VGWNSIIASYALH 298
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/655 (33%), Positives = 360/655 (54%), Gaps = 35/655 (5%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
++ + ++++S K + N +F++ ++ + SWNSVI+ G + EA+ F
Sbjct: 443 TQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTI-SWNSVISGCTSNGLNSEAIELFVR 501
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M +T + +C+ H G+ H + G + +++AL+DMYS C +
Sbjct: 502 MWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSD 561
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
++F + Q+ N+VSWT+M+T Y + + L +E +L D
Sbjct: 562 WHSTNQIFRNMAQK--NVVSWTAMITSYTRAGLFDKVAGLLQEMVL------------DG 607
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ D A+ SVL + + HG+ I+ G + + V N L++ Y +++ +R
Sbjct: 608 IKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEAR 667
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VFD + KD ++WN++I Y++N A E+ +F M+ K N VT++ +L A+A +
Sbjct: 668 LVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDML--LQFKPNTVTMTCILPAVASI 725
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L G+ IH ++ E +++DMY KCG + +AR F+++ +KN+ SWT MI
Sbjct: 726 SSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMI 785
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
AGYGMH ++A+ LF +M +GV P+ +F ++L AC H+GL EGW + N M E+ I
Sbjct: 786 AGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKI 845
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
EP ++HY C+VDLL G LKEA++ IE M ++ D +W SLL CRIH++V L E A
Sbjct: 846 EPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVAD 905
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
++F+LEP N GY+VLL+NIYA A RWE V++ ++ + R L + G S +E+RGKVH F+
Sbjct: 906 RVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFI 965
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
++ HP+ +I E+L+ + +++E G+ + + + L HS KLA
Sbjct: 966 ADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLAVTFG 1025
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
N +VC CH + ISK+ +REI++RDS RFH+F+ G CSC
Sbjct: 1026 VLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSC 1080
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 182/383 (47%), Gaps = 16/383 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ K NV WN ++ A+ + E+L F M +L +TP C +K + L
Sbjct: 365 VFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLS 424
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G AH GF V +ALI Y+K + +A +FD +P ++ +SW S+
Sbjct: 425 CARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPH--QDTISWNSV 482
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G N EA+ LF ++ E +DS + SVL AC+R V
Sbjct: 483 ISGCTSNGLNSEAIELFVRMWMQGHE------------LDSTTLLSVLPACARSHYWFVG 530
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
HG+ +K G E + N L+D Y+ + ++F M +K+ V+W ++I Y +
Sbjct: 531 RVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRA 590
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL + + +MV +K + +++VL A L+ GK +H I+ +E+ + V
Sbjct: 591 GLFDKVAGLLQEMVLD-GIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPV 649
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++++MY C ++ AR F+ + K++ SW +I GY + A E+ LF M+
Sbjct: 650 ANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-F 708
Query: 388 RPNYITFVSVLSACSHAGLVQEG 410
+PN +T +L A + ++ G
Sbjct: 709 KPNTVTMTCILPAVASISSLERG 731
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 219/447 (48%), Gaps = 46/447 (10%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ--QA 99
N I L + GD ALR S + + ++ ++ C L + ++AH +A
Sbjct: 67 NLRIQRLCQAGDLAAALRLLGSDGGVGV----RSYCAVVQLCGEERSLEAARRAHALVRA 122
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G V + L+ Y KCG+L AR +FDE+P R+ ++ WTS+++ Y + + +E
Sbjct: 123 GTGGIIGSV-LGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQE 181
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFVIKR 217
+ LF++ +C G S D+ A++ VL + ++ +TEG HG + K
Sbjct: 182 GVSLFRQM-----QCCGVSP-------DAHAVSCVLKCIA--SLGSITEGEVIHGLLEKL 227
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
G V N LI Y+R G ++ + +VFD M +DA++WNS I+ Y NG A+D+F
Sbjct: 228 GLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLF 287
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK----MDLE--ESVI---VG 328
+M S + ++VT+ +VL A A LG +GK +H +K DLE +S I +G
Sbjct: 288 SKMW-SEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALG 346
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+ ++ MY KCG + AR+ F+ M K NV W ++ GY E+L LF +M + G+
Sbjct: 347 SKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGI 406
Query: 388 RPNYITFVSVLS-----ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
P+ +L +C+ GLV G +L +G F + V ++ ++
Sbjct: 407 TPDEHALSCLLKCITCLSCARDGLVAHG--YLVKLG--FGTQCAV--CNALISFYAKSNM 460
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGAC 469
+ A + + M D + W S++ C
Sbjct: 461 IDNAVLVFDRMP-HQDTISWNSVISGC 486
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 221/503 (43%), Gaps = 52/503 (10%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+ SWNS I+ G A+ FS M + T + +C+ L GK H
Sbjct: 263 DAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVH 322
Query: 97 QQAFIFGFHRDV---------FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G D+ + S L+ MY KCG++ AR++FD +P + N+ W +
Sbjct: 323 GYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSK-GNVHVWNLI 381
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS--ACSRVTVNG 205
+ GY + E+LLLF++ E G + D A++ +L C +G
Sbjct: 382 MGGYAKAAEFEESLLLFEQM----HELG--------ITPDEHALSCLLKCITCLSCARDG 429
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ AHG+++K GF ++ V N LI YA+ +D + VFD M +D ++WNS+I+
Sbjct: 430 LV--AHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCT 487
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
NGL +EA+++F +M + ++ TL +VL A A +G+ +H +K L
Sbjct: 488 SNGLNSEAIELFVRMWMQGH-ELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGET 546
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+ +++DMY C + F M +KNV SWTAMI Y + L +M+
Sbjct: 547 SLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLD 606
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G++P+ SVL + +++G H + I G+E LL A L E
Sbjct: 607 GIKPDVFAVTSVLHGFAGDESLKQG-----KSVHGYAIRNGME------KLLPVANALME 655
Query: 446 AYDLIEGMK---------VKADFVVWGSLLGA-CRIHKNVDLGEIAAKKLFELEPNNCGY 495
Y M+ D + W +L+G R + + + + L + +PN
Sbjct: 656 MYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQFKPNT--- 712
Query: 496 HVLLSNIYANAGRWEDVERTRSL 518
V ++ I +ER R +
Sbjct: 713 -VTMTCILPAVASISSLERGREI 734
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 181/378 (47%), Gaps = 25/378 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V W S+++ A+ GD E + F M+ ++P C +K ++L + G+ H
Sbjct: 162 DVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIH 221
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G V++ALI +YS+CG + DA ++FD + R+ +SW S ++GY N
Sbjct: 222 GLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSM--HARDAISWNSTISGYFSNGW 279
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
A+ LF + E +E + SV + SVL AC+ + V + HG+ +K
Sbjct: 280 HDRAVDLFSKMWSEGTE------------ISSVTVLSVLPACAELGFELVGKVVHGYSMK 327
Query: 217 RG--FDSEV-------GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV-TWNSIIAIYAQ 266
G +D E +G+ L+ Y + G + +R+VFD M K V WN I+ YA+
Sbjct: 328 SGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAK 387
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
E+L +F+QM + + LS +L I L R G H ++K+
Sbjct: 388 AAEFEESLLLFEQM-HELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCA 446
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V ++I Y K +D A F++M ++ SW ++I+G + EA++LF +M G
Sbjct: 447 VCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQG 506
Query: 387 VRPNYITFVSVLSACSHA 404
+ T +SVL AC+ +
Sbjct: 507 HELDSTTLLSVLPACARS 524
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 235/649 (36%), Positives = 368/649 (56%), Gaps = 41/649 (6%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP 77
K S T LF++ +++ + +WNS+I+ G + EA+ + +M + P TF
Sbjct: 47 KCSVITEARKLFDEMPNRH-IVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFS 105
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFH-RDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
K+ S + G++AH A + GF D FV++ ++DMY+K G++ DAR +FD +
Sbjct: 106 AIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLD 165
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
+ ++V +T+++ GY Q EAL +F++ + + + +ASVL
Sbjct: 166 K--DVVLFTALIVGYNQRGLDGEALEVFEDMV------------GSRIKPNEYTLASVLV 211
Query: 197 ACSRV--TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
+C + VNG + HG V+K G +S V +L+ Y++ V+ S KVF+ +
Sbjct: 212 SCGNLGDLVNG--KLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASH 269
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
VTW S I QNG AL +F +M++ + + N T S++L A + L +L G+ IH
Sbjct: 270 VTWTSFIVGLVQNGREEIALSMFREMIRCS-ISPNHFTFSSILHACSSLAMLEAGEQIHA 328
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
+K+ ++ + V ++I +Y KCG V+ AR F + E +V S MI Y + E
Sbjct: 329 VTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHE 388
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
AL+LF +M K G +PN +TF+S+L AC++AGLV+EG + + + +IE +HY CM+
Sbjct: 389 ALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMI 448
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCG 494
DLLGRA + +EA LIE K D + W +LL AC+IH V++ E KK+ + P + G
Sbjct: 449 DLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGG 507
Query: 495 YHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEK 554
H+LL+NIYA+AG+W++V +S ++ RL KTP S V++ +VH F+ GD HP+ +
Sbjct: 508 THILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHE 567
Query: 555 IYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------------- 599
I E L EL K+ +GY D V+ D+++E+K L HSEKLA
Sbjct: 568 ISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAI 627
Query: 600 ----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH+ I+ +S + R+I+ RD+KRFH+FK G+CSC DYW
Sbjct: 628 RIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/378 (33%), Positives = 199/378 (52%), Gaps = 32/378 (8%)
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
KS + L LH+ F F H+ LID Y KC +++ARKLFDE+P R+
Sbjct: 15 KSLTTLKSLHTHILKSGSLFSFFGHK-------LIDGYIKCSVITEARKLFDEMPN--RH 65
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
IV+W SM++ +V +EA+ L+ L E V D+ +++ A S
Sbjct: 66 IVTWNSMISSHVSRGKTKEAIELYDNMLFE------------GVLPDAYTFSAIFKAFSE 113
Query: 201 VTVNGVTEGAHGFVIKRGFDSEVG-VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ V+ + AHG + GF+ G V ++D YA+ G + +R VFD +++KD V + +
Sbjct: 114 MGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTA 173
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+I Y Q GL EAL+VF+ MV S +K N TL++VL++ +LG L GK IH V+K
Sbjct: 174 LIVGYNQRGLDGEALEVFEDMVGSR-IKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKS 232
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
LE V TS++ MY KC V+ + K FN + + +WT+ I G + R AL +F
Sbjct: 233 GLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMF 292
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVD 435
+MI+ + PN+ TF S+L ACS +++ G H ++ GV+ ++
Sbjct: 293 REMIRCSISPNHFTFSSILHACSSLAMLEAGEQI-----HAVTVKLGVDGNKYVDAALIH 347
Query: 436 LLGRAGKLKEAYDLIEGM 453
L G+ G +++A + E +
Sbjct: 348 LYGKCGNVEKARSVFESL 365
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/635 (35%), Positives = 353/635 (55%), Gaps = 41/635 (6%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
++ + +++I+ + G E+LR F +M P+ T + +CS L +
Sbjct: 182 TSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFV 241
Query: 96 HQQAF-IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
+QA + RD + + L+ Y++ +LS AR FD I + ++VSW +M Y+Q+
Sbjct: 242 LEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAI--QSPDVVSWNAMAAAYLQH 299
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV---TVNGVTEGAH 211
REAL+LF+ LLE V + L+AC+ T + + +
Sbjct: 300 HRPREALVLFERMLLE------------GVRPSVATFITALTACAAYPPQTASAIGKRIQ 347
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM--IEKDAVTWNSIIAIYAQNGL 269
+ + G + + V N ++ YA+ G + +R VF+ + +D +TWNS++A Y +GL
Sbjct: 348 SLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGL 407
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EA ++F M VK N VT AVL A + G+ IH +V+ E ++
Sbjct: 408 GKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQN 467
Query: 330 SIIDMYCKCGQVDLARKAFNQMK--EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++++MY KCG +D A+ F++ +++V +WT+++AGY + +A AL LF+ M + GV
Sbjct: 468 ALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGV 527
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
RPN+ITF+S L+AC+H G +++G L+ M + I P +H+ C+VDLLGR G+L EA
Sbjct: 528 RPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAE 587
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
L+E +AD + W +LL AC+ K ++ GE A+++ +L+P +++L+++YA AG
Sbjct: 588 KLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAG 646
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RW + R M ++ + PG S VE+ ++H+F GDK HP+ E+IY LE L+ ++
Sbjct: 647 RWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIK 706
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV D V+HDV QE KE L HSEKLA NLRVC DCHT
Sbjct: 707 AAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHT 766
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LISKV R+I++RDS R+H+F G CSCGDYW
Sbjct: 767 ATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 801
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 202/400 (50%), Gaps = 23/400 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ-RI 138
+ +CS L +L +G++ H Q F + + +ALI MYSKCG L DA++ FD +P+
Sbjct: 14 VNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASK 73
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
R++V+W +M++ +++N +AREAL LF++ G N SV SVL +C
Sbjct: 74 RDVVTWNAMISAFLRNGSAREALQLFRDM----DHDGAPPPN-------SVTFVSVLDSC 122
Query: 199 SRVTVNGVTE--GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF----DGMIEK 252
+ + + HG ++ G + E V L+D+Y + G +D + +VF D
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182
Query: 253 DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI 312
VT +++I+ QNG E+L +F M K + VTL +VL A + L V +
Sbjct: 183 SLVTCSAMISACWQNGWPQESLRLFYAM-NLEGTKPSGVTLVSVLNACSMLPVGSATAFV 241
Query: 313 HDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
+Q ++ + ++GT+++ Y + + AR F+ ++ +V SW AM A Y H R
Sbjct: 242 LEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHR 301
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACS--HAGLVQEGWHWLNTMGHEFNIEPGVEH 429
REAL LF +M+ GVRP+ TF++ L+AC+ + ++ E +E
Sbjct: 302 PREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAV 361
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGM-KVKADFVVWGSLLGA 468
+++ + G L +A + E + + D + W S+L A
Sbjct: 362 ANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAA 401
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 216/456 (47%), Gaps = 47/456 (10%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS-TFPCAIKSC--SALHDLHS 91
K +V +WN++I+ R G + EAL+ F M P S TF + SC + L L
Sbjct: 73 KRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLED 132
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLF----DEIPQRIRNIVSWTSM 147
+ H + G R+ FV +AL+D Y K G L DA ++F DE P ++V+ ++M
Sbjct: 133 VRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS--TSLVTCSAM 190
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ QN +E+L LF LE ++ G V + SVL+ACS + V T
Sbjct: 191 ISACWQNGWPQESLRLFYAMNLEGTKPSG------------VTLVSVLNACSMLPVGSAT 238
Query: 208 EGAHGFVIKRGFD-----SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
FV+++ + + +G TL+ YAR + +R FD + D V+WN++ A
Sbjct: 239 ----AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAA 294
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG---VLRLGKCIHDQVIKM 319
Y Q+ EAL +F++M+ V+ + T L A A +GK I + +
Sbjct: 295 AYLQHHRPREALVLFERMLLE-GVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEA 353
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE--KNVRSWTAMIAGYGMHCRAREALD 377
LE V + ++MY KCG + AR F ++ ++ +W +M+A YG H +EA +
Sbjct: 354 GLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFE 413
Query: 378 LFYKM-IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGC 432
LF M + V+PN +TFV+VL A + + +G H + G E
Sbjct: 414 LFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREI-----HARVVSNGFESDTVIQNA 468
Query: 433 MVDLLGRAGKLKEAYDLIE-GMKVKADFVVWGSLLG 467
++++ + G L +A + + + D + W SL+
Sbjct: 469 LLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVA 504
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 166/340 (48%), Gaps = 24/340 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS- 91
+ +V SWN++ A + EAL F M + P+ +TF A+ +C+A +
Sbjct: 281 IQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTAS 340
Query: 92 --GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
GK+ G D V++A ++MY+KCG L+DAR +F+ I R+ ++W SML
Sbjct: 341 AIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLA 400
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
Y + +EA LF+ A E V + V +VL A + T
Sbjct: 401 AYGHHGLGKEAFELFQ-----------AMEAEKLVKPNKVTFVAVLDASTSRTSIAQGRE 449
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD--GMIEKDAVTWNSIIAIYAQN 267
H V+ GF+S+ + N L++ YA+ G +D ++ +FD ++D + W S++A YAQ
Sbjct: 450 IHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQY 509
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A AL +F M + V+ N +T + L A H G L G C + + M + ++
Sbjct: 510 GQAERALKLFWTM-QQQGVRPNHITFISALTACNHGGKLEQG-C--ELLSGMTPDHGIVP 565
Query: 328 GTS----IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
+ I+D+ +CG++D A K + + +V +W A++
Sbjct: 566 ASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALL 605
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/456 (44%), Positives = 295/456 (64%), Gaps = 20/456 (4%)
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
E H VI+ GF S + V N+L+ YA G V + KVFD M EKD V WNS+I +A+N
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EAL ++ +M S +K + T+ ++L A A +G L LGK +H +IK+ L ++
Sbjct: 68 GKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF-YKMIKAG 386
++D+Y +CG+V+ A+ F++M +KN SWT++I G ++ +EA++LF Y G
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+ P ITFV +L ACSH G+V+EG+ + M E+ IEP +EH+GCMVDLL RAG++K+A
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
Y+ I+ M ++ + V+W +LLGAC +H + DL E A ++ +LEPN+ G +VLLSN+YA+
Sbjct: 247 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 306
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
RW DV++ R M + K PG SLVE+ +VH FL+GDK HPQ + IY L+E+ +L
Sbjct: 307 QRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRL 366
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+ GYV +++V DV++EEKE + HSEK+A NLRVC DCH
Sbjct: 367 RSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCH 426
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+L+SKV +REIVVRD RFH+FK+G CSC DYW
Sbjct: 427 LAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 149/286 (52%), Gaps = 16/286 (5%)
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ D+ G+ H GF ++V ++L+ +Y+ CG+++ A K+FD++P++ ++V+W
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK--DLVAWN 58
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
S++ G+ +N EAL L+ E NS + D I S+LSAC+++
Sbjct: 59 SVINGFAENGKPEEALALYTEM------------NSKGIKPDGFTIVSLLSACAKIGALT 106
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ + H ++IK G + N L+D YAR G V+ ++ +FD M++K++V+W S+I A
Sbjct: 107 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 166
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEES 324
NG EA+++F M + + +T +L A +H G+++ G + + +E
Sbjct: 167 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPR 226
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+ ++D+ + GQV A + M + NV W ++ +H
Sbjct: 227 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 272
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 20/239 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K +K+ V +WNSVI A G EAL ++ M + P T + +C+ +
Sbjct: 45 VFDKMPEKDLV-AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 103
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK+ H G R++ S+ L+D+Y++CG + +A+ LFDE+ +N VSWTS+
Sbjct: 104 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD--KNSVSWTSL 161
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G N +EA+ LFK E+++ + + +L ACS + V
Sbjct: 162 IVGLAVNGFGKEAIELFKYM-----------ESTEGLLPCEITFVGILYACSHCGM--VK 208
Query: 208 EGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
EG F R + + ++D AR G V + + M ++ + V W +++
Sbjct: 209 EGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG 267
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 10/165 (6%)
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
+RLG+ IH VI+ + V S++ +Y CG V A K F++M EK++ +W ++I G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
+ + + EAL L+ +M G++P+ T VS+LSAC+ G + L H + I+
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALT-----LGKRVHVYMIKV 118
Query: 426 GVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
G+ ++DL R G+++EA L + M V + V W SL+
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSA 85
TLF++ VDKN+V SW S+I LA G EA+ F M L P TF + +CS
Sbjct: 145 TLFDEMVDKNSV-SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 203
Query: 86 LHDLHSGKQAHQQAF-IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
+ G + ++ + + ++D+ ++ G++ A + +P + N+V W
Sbjct: 204 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ-PNVVIW 262
Query: 145 TSML 148
++L
Sbjct: 263 RTLL 266
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/639 (35%), Positives = 373/639 (58%), Gaps = 41/639 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + ++ +WNS+I+ G S EA+ + +M + P TF K+ S L
Sbjct: 57 LFDE-LPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLG 115
Query: 88 DLHSGKQAHQQAFIFGFH-RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ G++AH A + G D FV+SAL+DMY+K ++ DA +F + ++ ++V +T+
Sbjct: 116 LIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEK--DVVLFTA 173
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV--TVN 204
++ GY Q+ EAL +F++ + + V + +A +L C + VN
Sbjct: 174 LIVGYAQHGLDGEALKIFEDMV------------NRGVKPNEYTLACILINCGNLGDLVN 221
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
G + HG V+K G +S V +L+ Y+R ++ S KVF+ + + VTW S +
Sbjct: 222 G--QLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGL 279
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
QNG A+ +F +M++ + + N TLS++L A + L +L +G+ IH +K+ L+ +
Sbjct: 280 VQNGREEVAVSIFREMIRCS-ISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGN 338
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
G ++I++Y KCG +D AR F+ + E +V + +MI Y + EAL+LF ++
Sbjct: 339 KYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKN 398
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
G+ PN +TF+S+L AC++AGLV+EG ++ + NIE ++H+ CM+DLLGR+ +L+
Sbjct: 399 MGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLE 458
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
EA LIE ++ D V+W +LL +C+IH V++ E K+ EL P + G H+LL+N+YA
Sbjct: 459 EAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYA 517
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
+AG+W V +S +++ +L K+P S V++ +VH F+ GD HP+ +I+E L L
Sbjct: 518 SAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMK 577
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------------NLRVCG 605
K++ +GY + V+ D+D+E+K +L HSEKLA NLRVCG
Sbjct: 578 KVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCG 637
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH+ I+ +S + R+I+ RDSKRFH+FK GLCSC DYW
Sbjct: 638 DCHSWIKFVSLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 198/373 (53%), Gaps = 21/373 (5%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L + + H GF F+ LID Y KCG L++ARKLFDE+P R+IV+W SM+
Sbjct: 17 LTTLRAVHTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKLFDELPS--RHIVTWNSMI 73
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
+ ++ + ++EA+ + L+E V D+ +++ A S++ + +
Sbjct: 74 SSHISHGKSKEAVEFYGNMLME------------GVLPDAYTFSAISKAFSQLGLIRHGQ 121
Query: 209 GAHGFVIKRGFDSEVG-VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
AHG + G + G V + L+D YA+ + + VF ++EKD V + ++I YAQ+
Sbjct: 122 RAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQH 181
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL EAL +F+ MV + VK N TL+ +L+ +LG L G+ IH V+K LE V
Sbjct: 182 GLDGEALKIFEDMV-NRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVAS 240
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
TS++ MY +C ++ + K FNQ+ N +WT+ + G + R A+ +F +MI+ +
Sbjct: 241 QTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSI 300
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA- 446
PN T S+L ACS +++ G ++ + + ++ +++L G+ G + +A
Sbjct: 301 SPNPFTLSSILQACSSLAMLEVG-EQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKAR 359
Query: 447 --YDLIEGMKVKA 457
+D++ + V A
Sbjct: 360 SVFDVLTELDVVA 372
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 31/221 (14%)
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
S+++ AH L + +H VIK S + G +ID Y KCG + ARK F+++
Sbjct: 5 SSLIAQSAHTKSLTTLRAVHTNVIKSGFSYSFL-GHKLIDGYIKCGSLAEARKLFDELPS 63
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
+++ +W +MI+ + H +++EA++ + M+ GV P+ TF ++ A S GL++ G
Sbjct: 64 RHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQR- 122
Query: 414 LNTMGHEFNIEPGVEHY-----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
H + G+E +VD+ + K+++A+ L+ ++ D V++ +L+
Sbjct: 123 ----AHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAH-LVFRRVLEKDVVLFTALIVG 177
Query: 469 CRIHKNVDLGEIAAKKLFE------LEPN---------NCG 494
H +D GE A K+FE ++PN NCG
Sbjct: 178 YAQH-GLD-GE--ALKIFEDMVNRGVKPNEYTLACILINCG 214
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/625 (37%), Positives = 341/625 (54%), Gaps = 65/625 (10%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P+ STF +K +L + KQ H Q G ++ + LI Y C LS AR +
Sbjct: 53 PSHSTFVQLLKKRPSLTQI---KQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIV 109
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
FD+ P I+ W M+ Y + +++E+L LF + L + D
Sbjct: 110 FDQFPSLPPTII-WNLMIQAYSKTPSSQESLYLFHQML----------AHGRPTSADKYT 158
Query: 191 IASVLSACSR-VTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
V +ACSR T+ G E HG V+K G++S++ VGN+L++ Y+ + +++VFD M
Sbjct: 159 FTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEM 218
Query: 250 IEKDAVTWNSIIAIYAQNG-------------------------------LAAEALDVFD 278
++D +TW S++ YA G EAL F+
Sbjct: 219 PQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFN 278
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
M+ +VK N L ++L A AHLG L GK IH + K + S + T++IDMY KC
Sbjct: 279 DMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKC 338
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G++D AR+ F+ + ++++ +WT+MI+G MH E L F +M+ G +P+ IT + VL
Sbjct: 339 GRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVL 398
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
+ CSH+GLV+EG + M + I P +EHYGC++DLLGRAG+L+ A++ I+ M ++ D
Sbjct: 399 NGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPD 458
Query: 459 FVVWGSLLGACRIHKNVDLGEIAAKKLFELEP-NNCGYHVLLSNIYANAGRWEDVERTRS 517
V W +LL ACRIH +VDLGE + EL P ++ G +VLLSN+YA+ G+WE V + R
Sbjct: 459 VVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRK 518
Query: 518 LMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ-EVGYVTDMT 576
M R PG S +E+ G VH FL DK HP+ +I + L E+ ++ E GYV
Sbjct: 519 AMSQRGSEGCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTK 578
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA-----------------NLRVCGDCHTVIRLISKVVD 619
V+ D+++E+KE + HSEKLA NLR C DCH+ ++ IS V +
Sbjct: 579 QVLFDLNEEDKEQAVSWHSEKLAVAFGLLSTQEGTIRITKNLRTCEDCHSAMKTISLVFN 638
Query: 620 REIVVRDSKRFHYFKDGLCSCGDYW 644
REIVVRD RFH F+ G CSC DYW
Sbjct: 639 REIVVRDRSRFHTFRYGNCSCTDYW 663
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/623 (36%), Positives = 347/623 (55%), Gaps = 72/623 (11%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM---YSKCGELSDARKLF 131
T C ++ CS +L KQ H + G +D + + + + L A+ +F
Sbjct: 17 TMSC-LQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72
Query: 132 DEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAI 191
D + + W M+ G+ +D +LLL++ L C A N+
Sbjct: 73 DGFDRP--DTFLWNLMIRGFSCSDEPERSLLLYQRML-----CSSAPHNA-------YTF 118
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYA----------------- 234
S+L ACS ++ T H + K G++++V N+LI++YA
Sbjct: 119 PSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE 178
Query: 235 --------------RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
+ G +D++ +F M EK+A++W ++I+ Y Q + EAL +F +M
Sbjct: 179 PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM 238
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
+++DV+ + V+L+ L A A LG L GK IH + K + ++G +IDMY KCG+
Sbjct: 239 -QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
++ A + F +K+K+V++WTA+I+GY H REA+ F +M K G++PN ITF +VL+A
Sbjct: 298 MEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 401 CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
CS+ GLV+EG +M ++N++P +EHYGC+VDLLGRAG L EA I+ M +K + V
Sbjct: 358 CSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV 417
Query: 461 VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMK 520
+WG+LL ACRIHKN++LGE + L ++P + G +V +NI+A +W+ TR LMK
Sbjct: 418 IWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMK 477
Query: 521 NRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIH 580
+ +AK PG S + L G H FL GD+ HP+ EKI + KL+E GYV ++ ++
Sbjct: 478 EQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLL 537
Query: 581 D-VDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDRE 621
D VD +E+E + HSEKLA NLRVC DCH V +LISK+ R+
Sbjct: 538 DLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRD 597
Query: 622 IVVRDSKRFHYFKDGLCSCGDYW 644
IV+RD RFH+F+DG CSCGDYW
Sbjct: 598 IVMRDRTRFHHFRDGKCSCGDYW 620
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 178/376 (47%), Gaps = 48/376 (12%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D+ + F WN +I + + +L + M S TFP +K+CS L
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR---------------- 137
Q H Q G+ DV+ ++LI+ Y+ G A LFD IP+
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 138 -------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
+N +SWT+M++GYVQ D +EAL LF E +NSD V
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM-----------QNSD-V 243
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
D+V++A+ LSAC+++ + H ++ K + +G LID YA+ G ++ + +
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VF + +K W ++I+ YA +G EA+ F +M K +K N +T +AVL A ++ G
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQK-MGIKPNVITFTAVLTACSYTG 362
Query: 305 VLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAM 362
++ GK I + + +L+ ++ I+D+ + G +D A++ +M K N W A+
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422
Query: 363 IAGYGMHCRAREALDL 378
+ CR + ++L
Sbjct: 423 LKA----CRIHKNIEL 434
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
TLF K +KN + SW ++I+ + + EAL+ F M+ + P + A+ +C+ L
Sbjct: 202 TLFRKMAEKNAI-SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 260
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L GK H D + LIDMY+KCGE+ +A ++F I + +++ +WT+
Sbjct: 261 GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK--KSVQAWTA 318
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+++GY + + REA+ F E + + + +VL+ACS + V
Sbjct: 319 LISGYAYHGHGREAISKFMEM------------QKMGIKPNVITFTAVLTACSYTGL--V 364
Query: 207 TEGAHGFV-IKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
EG F ++R ++ + + + ++D R G +D +++ M ++ +AV W +++
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/571 (38%), Positives = 341/571 (59%), Gaps = 37/571 (6%)
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H Q G +D F+ L+ SKC + A ++F N+ +T+++ G+V +
Sbjct: 59 HAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNP--NVYLYTALIDGFVSSG 116
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
N EA+ L+ L E ++ D+ +AS+L AC H +
Sbjct: 117 NYLEAIQLYSRMLHE------------SILPDNYLMASILKACGSQLALREGREVHSRAL 164
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE----KDAVTWNSIIAIYAQNGLAA 271
K GF S V +++ Y + G + +R+VF+ M E KD V W ++I + +N
Sbjct: 165 KLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETN 224
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
AL+ F M + +V+ N T+ VL A + LG L +G+ +H + K ++E ++ VG ++
Sbjct: 225 RALEAFRGM-QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNAL 283
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
I+MY +CG +D A+ F++MK+++V ++ MI+G M+ ++R+A++LF M+ +RP
Sbjct: 284 INMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTN 343
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+TFV VL+ACSH GLV G+ ++M ++ +EP +EHYGCMVDLLGR G+L+EAYDLI
Sbjct: 344 VTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIR 403
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
MK+ D ++ G+LL AC++HKN++LGE AK+L + + G +VLLS++YA++G+W++
Sbjct: 404 TMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKE 463
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
+ R+ MK + K PG S +E+ ++H FL+GD HPQ E+IYE LEELN L+ GY
Sbjct: 464 AAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGY 523
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
+ V+ D++ EKE L +HSE+LA NLRVC DCH+ I+L
Sbjct: 524 HPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKL 583
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+K+ R+IVVRD RFHYF++G CSCGDYW
Sbjct: 584 IAKITRRKIVVRDRNRFHYFENGACSCGDYW 614
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 169/325 (52%), Gaps = 16/325 (4%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+Y NV+ + ++I G+ +EA++ +S M S+ P +K+C + L
Sbjct: 95 QYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALR 154
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI--RNIVSWTSML 148
G++ H +A GF + V ++++Y KCGEL DAR++F+E+P+ + ++ V WT+M+
Sbjct: 155 EGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMI 214
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
G+V+N+ AL F+ +NV + I VLSACS++ +
Sbjct: 215 DGFVRNEETNRALEAFRGM------------QGENVRPNEFTIVCVLSACSQLGALEIGR 262
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H ++ K + + VGN LI+ Y+R G +D ++ VFD M ++D +T+N++I+ + NG
Sbjct: 263 WVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNG 322
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIV 327
+ +A+++F MV ++ VT VL A +H G++ G + H +E +
Sbjct: 323 KSRQAIELFRVMV-GRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEH 381
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK 352
++D+ + G+++ A MK
Sbjct: 382 YGCMVDLLGRVGRLEEAYDLIRTMK 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
IH Q+I+ + + ++ KC +D A + F NV +TA+I G+
Sbjct: 58 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 117
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
EA+ L+ +M+ + P+ S+L AC ++EG +++ +
Sbjct: 118 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGRE-VHSRALKLGFSSNRLVRL 176
Query: 432 CMVDLLGRAGKLKEAYDLIEGMK---VKADFVVWGSLL 466
+++L G+ G+L +A + E M V D V W +++
Sbjct: 177 RIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMI 214
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/663 (35%), Positives = 355/663 (53%), Gaps = 61/663 (9%)
Query: 29 FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK-LSLTPTRSTFPCAIKSCSALH 87
F K D++ V +WN +I + G A++A+++M K S TR T +K S+
Sbjct: 92 FEKLPDRDGV-TWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNG 150
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLF---------------- 131
+ GKQ H Q GF + V S L+DMYSK G +SDA+K+F
Sbjct: 151 HVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMG 210
Query: 132 --------DEIPQRIRNI----VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
++ Q R + VSW++M+ G QN +EA+ F+E +E
Sbjct: 211 GLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIE--------- 261
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
+ +D SVL AC + H +I+ + VG+ LID Y + +
Sbjct: 262 ---GLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCL 318
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
++ VFD M +K+ V+W +++ Y Q G A EA+ +F M +S + + TL + A
Sbjct: 319 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRS-GIDPDHYTLGQAISA 377
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A++ L G H + I L + V S++ +Y KCG +D + + FN+M ++ SW
Sbjct: 378 CANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSW 437
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
TAM++ Y RA EA+ LF KM++ G++P+ +T V+SACS AGLV++G + M +
Sbjct: 438 TAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMIN 497
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
E+ I P HY CM+DL R+G+++EA I GM + D + W +LL ACR N+++G+
Sbjct: 498 EYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGK 557
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
AA+ L EL+P++ + LLS+IYA+ G+W+ V + R MK + + K PG S ++ +GK+
Sbjct: 558 WAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKL 617
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
H+F D+ P ++IY LEEL K+ + GY D + V HDV++ K L HSE+LA
Sbjct: 618 HSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSERLA 677
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLRVC DCH + IS V REI+VRD+ RFH FKDG CSCG
Sbjct: 678 IAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCG 737
Query: 642 DYW 644
D+W
Sbjct: 738 DFW 740
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 222/447 (49%), Gaps = 63/447 (14%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
+ IK C L K H H + F+ + ++ Y+ AR++FD IP
Sbjct: 6 YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEF----------LLEE---SECGGASENSD 182
Q N+ SW ++L Y ++ + E F++ L+E S GA+ +
Sbjct: 66 QP--NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 123
Query: 183 NV----FVDSVAIASVLSACSRVTVNG---VTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
N F ++ ++++ + NG + + HG VIK GF+S + VG+ L+D Y++
Sbjct: 124 NTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSK 183
Query: 236 GGHVDVSRKVFDGM------------------------------IEKDAVTWNSIIAIYA 265
G + ++KVF G+ +EKD+V+W+++I A
Sbjct: 184 VGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLA 243
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QNG+ EA++ F +M K +K + +VL A LG + G+ IH +I+ +L++ +
Sbjct: 244 QNGMEKEAIECFREM-KIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHI 302
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VG+++IDMYCKC + A+ F++MK+KNV SWTAM+ GYG RA EA+ +F M ++
Sbjct: 303 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRS 362
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAG 441
G+ P++ T +SAC++ ++EG + H I G+ HY +V L G+ G
Sbjct: 363 GIDPDHYTLGQAISACANISSLEEGSQF-----HGKAITAGLIHYITVSNSLVTLYGKCG 417
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ ++ L M V+ D V W +++ A
Sbjct: 418 DIDDSTRLFNEMNVR-DEVSWTAMVSA 443
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 154/335 (45%), Gaps = 58/335 (17%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
T+F++ + + NV SW +++ + G + EA++ F M++ + P T AI +C+ +
Sbjct: 323 TVFDR-MKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANI 381
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G Q H +A G + VS++L+ +Y KCG++ D+ +LF+E+ +R+ VSWT+
Sbjct: 382 SSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEM--NVRDEVSWTA 439
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M++ Y Q A EA+ LF + + + D V + V+SACSR + V
Sbjct: 440 MVSAYAQFGRAVEAIQLFDKMV------------QLGLKPDGVTLTGVISACSRAGL--V 485
Query: 207 TEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
+G F + + G G + +ID ++R G ++ + +GM DA+ W ++++
Sbjct: 486 EKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLS 545
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
A + G L +GK + +I++D
Sbjct: 546 ------------------------------------ACRNKGNLEIGKWAAESLIELDPH 569
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
T + +Y G+ D + MKEKNVR
Sbjct: 570 HPAGY-TLLSSIYASKGKWDCVAQLRRGMKEKNVR 603
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/654 (35%), Positives = 363/654 (55%), Gaps = 89/654 (13%)
Query: 64 MRKLSLTP-TRSTFP----CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM- 117
M L P T S +P IK+C ++ +L KQ H G D +++ ++ +
Sbjct: 1 MNALMFQPNTASYYPRLDVPQIKACKSMREL---KQVHAFLVKTGQTHDNAIATEILRLS 57
Query: 118 -YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ-NDNAREALLLFKEFLLEESECG 175
S ++ A +FD++P+R N +W +++ + D +ALL+F + L E +
Sbjct: 58 ATSDFRDIGYALSVFDQLPER--NCFAWNTVIRALAETQDRHLDALLVFCQMLSEAT--- 112
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK------------------- 216
V + SVL AC+ + + HG ++K
Sbjct: 113 --------VEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVM 164
Query: 217 ----------------------------RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
RG + V + N ++D YAR G++ +R++FD
Sbjct: 165 CGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDR 224
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M ++ V+WN +I+ YAQNG EA+++F +M++ DV N VTL +VL AI+ LGVL L
Sbjct: 225 MAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLEL 284
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK +H K + ++G++++DMY KCG ++ A + F ++ + NV +W A+I G M
Sbjct: 285 GKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAM 344
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H +A + + +M K G+ P+ +T++++LSACSHAGLV EG + N M + ++P +E
Sbjct: 345 HGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIE 404
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HYGCMVDLLGRAG L+EA +LI M +K D V+W +LLGA ++HKN+ +G AA+ L ++
Sbjct: 405 HYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQM 464
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
P++ G +V LSN+YA++G W+ V R +MK+ + K PG S +E+ G +H FLV D
Sbjct: 465 APHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDS 524
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
H + + I+ LEE++ KL G++ D T V+ +D++ KE L HSEK+A
Sbjct: 525 HSRAKDIHSMLEEISNKLSLEGHMPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTP 584
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH+ ++LISK+ +R+IV+RD KRFH+F+ G CSC DYW
Sbjct: 585 PKTPLCIVKNLRICEDCHSSMKLISKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 187/413 (45%), Gaps = 77/413 (18%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDS-VEALRAFSSM-RKLSLTPTRSTFPCAIKSCS 84
++F++ ++N F+WN+VI LA D ++AL F M + ++ P + TFP +K+C+
Sbjct: 70 SVFDQLPERN-CFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACA 128
Query: 85 ALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD------------------ 126
+ L GKQ H FG D FV + L+ MY CG + D
Sbjct: 129 VMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNL 188
Query: 127 -----------------------------ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA 157
AR+LFD + Q R++VSW M++GY QN
Sbjct: 189 VRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQ--RSVVSWNVMISGYAQNGFY 246
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
+EA+ +F + +V + V + SVL A SR+ V + + H + K
Sbjct: 247 KEAIEIFHRMM-----------QMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKN 295
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
+ +G+ L+D YA+ G ++ + +VF+ + + + +TWN++I A +G A + +
Sbjct: 296 KIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYL 355
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC-IHDQVIKMDLEESVIVGTSIIDMYC 336
+M K + + VT A+L A +H G++ G+ +D V + L+ + ++D+
Sbjct: 356 SRMEK-CGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLG 414
Query: 337 KCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
+ G ++ A + M K + W A++ MH K IK G+R
Sbjct: 415 RAGYLEEAEELILNMPMKPDDVIWKALLGASKMH-----------KNIKIGMR 456
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 236/672 (35%), Positives = 362/672 (53%), Gaps = 67/672 (9%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N LF + D +NV SW S++ + G+ E L + MR+ ++ ++TF SC
Sbjct: 428 NAQKLFEEMPD-HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC 486
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
L D G Q +GF V V+++LI M+S + +A +FD + + +I+S
Sbjct: 487 GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNEC--DIIS 544
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W +M++ Y + RE+L F +E +S ++S+LS CS V
Sbjct: 545 WNAMISAYAHHGLCRESLRCFHWMRHLHNE------------TNSTTLSSLLSVCSSVDN 592
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
G HG V+K G DS V + NTL+ Y+ G + + VF M E+D ++WNS++A
Sbjct: 593 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 652
Query: 264 YAQNGLAAEALDVFDQM---------------------------------VKSTDVKCNA 290
Y Q+G + L + ++ ++ + N
Sbjct: 653 YVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANY 712
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
+T+ + L A A+L VL G+ +H VIK+ E + V + +DMY KCG++ K Q
Sbjct: 713 ITMVS-LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ 771
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
++ SW +I+ + H ++A + F++M+K G +P+++TFVS+LSAC+H GLV EG
Sbjct: 772 PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEG 831
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
+ ++M EF + PG+EH C++DLLGR+G+L A I+ M V + + W SLL ACR
Sbjct: 832 LAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACR 891
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
IH N++L A+ L EL+P++ +VL SN+ A +G+WEDVE R M + + K P
Sbjct: 892 IHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPAC 951
Query: 531 SLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMT 590
S V+L+ KVH+F +G+K HPQ +I L EL +E GYV D + +HD+D+E+KE
Sbjct: 952 SWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYN 1011
Query: 591 LRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHY 632
L HSE+LA NLRVCGDCH+V + +S +V R+IV+RD RFH+
Sbjct: 1012 LWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHH 1071
Query: 633 FKDGLCSCGDYW 644
F G CSCGDYW
Sbjct: 1072 FSGGKCSCGDYW 1083
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 157/617 (25%), Positives = 271/617 (43%), Gaps = 100/617 (16%)
Query: 16 VDKHSTNTNL---TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPT 72
VD HS + + LF ++++ V SWN++I A G + ++ F SM + L P
Sbjct: 134 VDFHSKCGKMEDASYLFGTMMERD-VVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPD 192
Query: 73 RSTFPCAIKSCSALHDLHSGKQAH------------------------------------ 96
T +++ + L Q H
Sbjct: 193 CYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRK 252
Query: 97 ---------QQAFIFGF-HRDVF-VSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
A I G+ H ++ + +ALIDMY+K GE+ DA++ FDE+ ++ N++SWT
Sbjct: 253 GMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEK--NVISWT 310
Query: 146 SMLTGYVQNDNAR--EALLLFKEF----------LLEESECGGASENSDNVFV------- 186
S+++GY ++ A +F E +L G E + +F
Sbjct: 311 SLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGV 370
Query: 187 --DSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
+ +AS+++ACSR EG HGFV+K G +V VG L+ Y G V +
Sbjct: 371 EPNGFMVASLITACSRSGYM-ADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNA 429
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
+K+F+ M + + V+W S++ Y+ +G E L+V+ +M + V N T + V +
Sbjct: 430 QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRM-RQEGVSGNQNTFATVTSSCGL 488
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
L LG + +I+ E+SV V S+I M+ V+ A F+ M E ++ SW AM
Sbjct: 489 LEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAM 548
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
I+ Y H RE+L F+ M N T S+LS CS + W + H
Sbjct: 549 ISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCS----SVDNLKWGRGI-HGLV 603
Query: 423 IEPGVEHYGC----MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH--KNVD 476
++ G++ C ++ L AG+ ++A + + M + D + W S++ AC + K +D
Sbjct: 604 VKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAM-TERDLISWNSMM-ACYVQDGKCLD 661
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE-----RTRSLMKNR----RLAKT 527
+I A+ L +P+ ++ L+ N E V+ R + + N LA T
Sbjct: 662 GLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAAT 721
Query: 528 PGFSLVELRGKVHAFLV 544
+++E ++H ++
Sbjct: 722 ANLAVLEEGQQLHGLVI 738
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 205/496 (41%), Gaps = 148/496 (29%)
Query: 59 RAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH---QQAFIFGFHRDVFVSSALI 115
R +++ LS PTR +K D + KQ H GF D+ +++ LI
Sbjct: 13 RLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLI 72
Query: 116 DMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG 175
Y K G++ AR +FD +P+R ++VSWT+M++GY QN +A +LF + CG
Sbjct: 73 IFYVKVGDVIAARNVFDGMPER--SVVSWTAMVSGYSQNGRFEKAFVLFSDM----RHCG 126
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
V + L+D +++
Sbjct: 127 -----------------------------------------------VKANHALVDFHSK 139
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
G ++ + +F M+E+D V+WN++I YA G A ++ +F M++ V + TL +
Sbjct: 140 CGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVP-DCYTLGS 198
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKM--------------------------DLEESVI--- 326
VL A A G L + IH + ++ DL + ++
Sbjct: 199 VLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKD 258
Query: 327 ------------------VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
+G ++IDMY K G+++ A++AF++M+EKNV SWT++I+GY
Sbjct: 259 LFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAK 318
Query: 369 H-----CRAR----------------------------EALDLFYKMIKAGVRPNYITFV 395
H AR EA+ LF +M GV PN
Sbjct: 319 HGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVA 378
Query: 396 SVLSACSHAG-LVQEGWHWLNTMGHEFNIEPGV---EHYG-CMVDLLGRAGKLKEAYDLI 450
S+++ACS +G + EG+ H F ++ G+ + G +V G G + A L
Sbjct: 379 SLITACSRSGYMADEGFQV-----HGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLF 433
Query: 451 EGMKVKADFVVWGSLL 466
E M + V W SL+
Sbjct: 434 EEMP-DHNVVSWTSLM 448
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 188/402 (46%), Gaps = 39/402 (9%)
Query: 7 SSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK 66
S +S++S S+ +F+ ++++ ++ SWN++I+ A G E+LR F MR
Sbjct: 512 SVANSLISMFSSFSSVEEACYVFD-HMNECDIISWNAMISAYAHHGLCRESLRCFHWMRH 570
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
L +T + CS++ +L G+ H G +V + + L+ +YS+ G D
Sbjct: 571 LHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSED 630
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL--------LEESECGGAS 178
A +F + +R +++SW SM+ YVQ+ + L + E L + GG +
Sbjct: 631 AELVFQAMTER--DLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHA 688
Query: 179 ENSD--------------NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
EN + + + + + S L+A + + V + HG VIK GF+S++
Sbjct: 689 ENEEPNEAVKAYKLIREKGIPANYITMVS-LAATANLAVLEEGQQLHGLVIKLGFESDLH 747
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
V N +D Y + G + K+ I + ++WN +I+ +A++G +A + F +M+K
Sbjct: 748 VTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLK-L 806
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS----IIDMYCKCGQ 340
K + VT ++L A H G++ G +D + + E V G IID+ + G+
Sbjct: 807 GPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTR---EFGVFPGIEHCVCIIDLLGRSGR 863
Query: 341 VDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYK 381
+ A +M N +W +++A CR L+L K
Sbjct: 864 LSHAEGFIKEMPVPPNDLAWRSLLAA----CRIHGNLELARK 901
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
+ G IH +I + + T +I Y K G V AR F+ M E++V SWTAM++GY
Sbjct: 47 KQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGY 106
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE------ 420
+ R +A LF M GV+ N+ V S C G +++ + TM
Sbjct: 107 SQNGRFEKAFVLFSDMRHCGVKANH-ALVDFHSKC---GKMEDASYLFGTMMERDVVSWN 162
Query: 421 -----FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ ++ + CM + R G + + Y L ++ A+ G L+ A +IH
Sbjct: 163 AMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAE---GGGLIIANQIH 216
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/510 (41%), Positives = 309/510 (60%), Gaps = 52/510 (10%)
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D+ + VL +C+ ++ + HG ++ G + + VG +LID Y + G + +RK+F
Sbjct: 106 DNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLF 165
Query: 247 DGMIEKDAVTWNSIIAIY-------------------------------AQNGLAAEALD 275
D MI +D +WN++IA Y QNG A +AL
Sbjct: 166 DKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALG 225
Query: 276 VFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+FD+M++ +++K N VT+ +VL A A L G+ IHD + L + V T++ M
Sbjct: 226 LFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGM 285
Query: 335 YCKCGQVDLARKAFNQMKE--KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
Y KC + AR F+ + + KN+ +W MI Y H EA+ +F M++AGV+P+ +
Sbjct: 286 YAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAV 345
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+ +LS CSH+GL+ G + N MG ++EP VEHY C+VDLLGRAG+L EA +LI
Sbjct: 346 TFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQ 405
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M ++A VWG+LL ACR H+N+++ E+AA++LF LEP+N G +VLLSN+YA AG WE+V
Sbjct: 406 MPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEV 465
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
++ R+L+K + + K+PG S +E+ GK H F+ DK HPQ ++IY++LE L K++ GY+
Sbjct: 466 KKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYI 525
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D + V+HD+ +EEKE L HSEKLA NLR+CGDCH + I
Sbjct: 526 PDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFI 585
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+ +REI+VRD RFH FKDG CSCGDYW
Sbjct: 586 SKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 165/354 (46%), Gaps = 48/354 (13%)
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM 117
L A++ M L L T P +KSC+ L + G+ H Q G D +V ++LIDM
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 118 YSKCGELSDARKLFDEIPQRI-----------------------------RNIVSWTSML 148
Y KCG + DARKLFD++ R RNIVSWT+M+
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
+GY QN A +AL LF E L + SE + + V I SVL AC++
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSE----------MKPNWVTIVSVLPACAQSAALERGR 261
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE--KDAVTWNSIIAIYAQ 266
H F G V L YA+ + +R FD + + K+ + WN++I YA
Sbjct: 262 RIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYAS 321
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESV 325
+G EA+ +F+ M+++ V+ +AVT +L +H G++ G +D +E V
Sbjct: 322 HGCGVEAVSIFENMLRA-GVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRV 380
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMHCRAREALDL 378
++D+ + G++ A++ +QM + S W A++A CR+ L++
Sbjct: 381 EHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAA----CRSHRNLEI 430
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 2/156 (1%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG- 92
+ N+ +WN++I A G VEA+ F +M + + P TF + CS + +G
Sbjct: 305 NGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGL 364
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ I V + ++D+ + G L +A++L ++P + V W ++L
Sbjct: 365 NHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSV-WGALLAACR 423
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
+ N A L + + E + G N++ ++
Sbjct: 424 SHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEA 459
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/639 (35%), Positives = 349/639 (54%), Gaps = 46/639 (7%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K ++ +V SW ++IA + A + M+ + P + T + + L
Sbjct: 164 KRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLS 223
Query: 91 SGKQAHQQAFIFGF------HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
GK F++G DV V ++ ++M+ G L DAR+LF+++ R ++V+W
Sbjct: 224 EGK------FVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDR--DVVTW 275
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++T YVQN+N EA+ LF D V + + +L+ + +T
Sbjct: 276 NIVITLYVQNENFGEAVRLFGRL------------QQDGVKANDITFVLMLNVYTSLTSL 323
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
+ H V + G+D + V L+ Y R + K+F M KD +TW + Y
Sbjct: 324 AKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAY 383
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
AQNG EAL +F +M + + + TL AVL AHL L+ G+ IH +I+
Sbjct: 384 AQNGFRKEALQLFQEM-QLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRME 442
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
++V T++I+MY KCG++ A F +M ++++ W +M+ Y H E L LF +M
Sbjct: 443 MVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQL 502
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
GV+ + ++FVSVLSA SH+G V +G+ + M +F+I P E YGC+VDLLGRAG+++
Sbjct: 503 DGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQ 562
Query: 445 EAYDLIEGMK-VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
EA D++ + D ++W +LLGACR H D + AA+++ E +P++ G +V+LSN+Y
Sbjct: 563 EAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVY 622
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A AG W+ V R R LM++R + K PG S +E+ +VH FL GD+ HP+ IY L+ LN
Sbjct: 623 AAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLN 682
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
+++ GY+ D ++HDV+ E KE L HSE+LA NLRVC
Sbjct: 683 SEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCS 742
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCHT + ISK+ REI+VRD+ RFH FKDG CSC DYW
Sbjct: 743 DCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/447 (31%), Positives = 230/447 (51%), Gaps = 23/447 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+++ +VF+W +I + GD AL F M++ + PT+ T+ + +C++ L G
Sbjct: 65 LERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDG 124
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H Q GF DVFV +ALI+MY+KCG + A F + R++VSWT+M+ V
Sbjct: 125 MEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEH--RDVVSWTAMIAACV 182
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--A 210
Q+D A L++ L D V + + + +V +A N ++EG
Sbjct: 183 QHDQFALARWLYRRMQL------------DGVVPNKITLYTVFNAYG--DPNYLSEGKFV 228
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
+G V +S+V V N+ ++ + G + +R++F+ M+++D VTWN +I +Y QN
Sbjct: 229 YGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENF 288
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA+ +F ++ + VK N +T +L L L GK IH+ V + + +V T+
Sbjct: 289 GEAVRLFGRL-QQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATA 347
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ +Y +C A K F M K+V +WT M Y + +EAL LF +M G RP
Sbjct: 348 LMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPT 407
Query: 391 YITFVSVLSACSHAGLVQEGWHW-LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
T V+VL C+H +Q+G + + + F +E VE ++++ G+ GK+ EA +
Sbjct: 408 SATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSV 465
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVD 476
E M K D +VW S+LGA H D
Sbjct: 466 FEKM-AKRDILVWNSMLGAYAQHGYYD 491
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 192/398 (48%), Gaps = 29/398 (7%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P + F ++ CS+ ++ G++ H GF ++ V LI MY++CG + +A+++
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVA 190
F EI +R +++ +WT M+ Y Q + AL +F + ++V V
Sbjct: 62 F-EILER-KDVFAWTRMIGIYCQQGDYDRALGMFYQM------------QEEDVMPTKVT 107
Query: 191 IASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
++L+AC+ + + +G HG ++++GF+ +V VG LI+ Y + G V + F
Sbjct: 108 YVAILNACA--STESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKR 165
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
+ +D V+W ++IA Q+ A A ++ +M + V N +TL V A L
Sbjct: 166 LEHRDVVSWTAMIAACVQHDQFALARWLYRRM-QLDGVVPNKITLYTVFNAYGDPNYLSE 224
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK ++ V +E V V S ++M+ G + AR+ F M +++V +W +I Y
Sbjct: 225 GKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQ 284
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
+ EA+ LF ++ + GV+ N ITFV +L+ + + +G + HE E G +
Sbjct: 285 NENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKG-----KVIHELVKEAGYD 339
Query: 429 HYG----CMVDLLGRAGKLKEAYDLIEGMKVKADFVVW 462
++ L GR +A+ + M K D + W
Sbjct: 340 RDAVVATALMSLYGRCEAPGQAWKIFVDMGSK-DVITW 376
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 161/327 (49%), Gaps = 18/327 (5%)
Query: 187 DSVAIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
D+ ++L CS + V G H V RGF+ V LI YA+ G V +++
Sbjct: 3 DTAFFVALLQRCS--SAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VF+ + KD W +I IY Q G AL +F QM + DV VT A+L A A
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQM-QEEDVMPTKVTYVAILNACASTE 119
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L+ G IH Q+++ E V VGT++I+MY KCG V A +F +++ ++V SWTAMIA
Sbjct: 120 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 179
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
H + A L+ +M GV PN IT +V +A + EG ++ + +E
Sbjct: 180 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEG-KFVYGLVSSGVME 238
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
V V++ G AG L +A L E M V D V W ++ +N + GE A +
Sbjct: 239 SDVRVMNSAVNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVI--TLYVQNENFGE--AVR 293
Query: 485 LF------ELEPNNCGYHVLLSNIYAN 505
LF ++ N+ + VL+ N+Y +
Sbjct: 294 LFGRLQQDGVKANDITF-VLMLNVYTS 319
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/626 (35%), Positives = 350/626 (55%), Gaps = 32/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SWNS+I+ GD +L F M+ + R + + +CS L +GK+ H
Sbjct: 191 DLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIH 250
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Q DV V ++L+DMY+KCG + A +LFD+I + +IV+W +M+ GY N
Sbjct: 251 CQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDK--SIVAWNAMIGGYSLNAQ 308
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+ E+ ++ + + D + + ++L C+++ + + HGF I+
Sbjct: 309 SFESFAYVRKM-----------QEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIR 357
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
GF + + L+D Y G + + +F M E++ ++WN++IA Y +NG +A+ +
Sbjct: 358 NGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTL 417
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F + T +K +A T++++L A A L LR + IH V K+ L+ + V SI+ MY
Sbjct: 418 FQDLCNKT-LKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYG 476
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG + AR+ F++M K+V SW +I Y +H R +++LF +M + G PN TFVS
Sbjct: 477 KCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVS 536
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+L +CS AGLV EGW + N+M ++NI PG+EHYGC++DL+GR G L A + IE M +
Sbjct: 537 LLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLA 596
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
+WGSLL A R +V+L EIAA+ + LE +N G +VLLSN+YA AGRWEDVER +
Sbjct: 597 PTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIK 656
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
MK L K+ G S+V+L K F+ D+ + +Y+ L+ ++ K+ E YV +T
Sbjct: 657 FHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVHSLT 716
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
++++ + + HS +LA N+R+C CH + IS+
Sbjct: 717 KFRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHRFAKRISETT 776
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
REI+VRDSK FH+F G CSCGDYW
Sbjct: 777 KREIIVRDSKIFHHFNGGHCSCGDYW 802
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 243/499 (48%), Gaps = 25/499 (5%)
Query: 6 SSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR 65
S S++ +S+ + N LF + + + F WN +I G +A+ + M
Sbjct: 60 SVSLTRALSSYVERGYMKNALDLFEN-MRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRME 118
Query: 66 KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
+ T+P IK+C L+DL G++ H + G D+++ ++LI MY+K G +
Sbjct: 119 FGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIE 178
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
A +F E+P +R++VSW SM++GYV + +L F+E + +
Sbjct: 179 SAEMVFREMP--VRDLVSWNSMISGYVSVGDGWRSLSCFREM------------QASGIK 224
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+D ++ +L ACS + H +++ + +V V +L+D YA+ G +D + ++
Sbjct: 225 LDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERL 284
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD + +K V WN++I Y+ N + E+ +M + + + +T+ +L A L
Sbjct: 285 FDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEA 344
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
+ LGK +H I+ +++ T+++DMY +CG++ A F QM E+N+ SW AMIA
Sbjct: 345 ILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIAS 404
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y + R+A+ LF + ++P+ T S+L A + ++E ++ + ++
Sbjct: 405 YTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREA-EQIHGYVTKLKLDS 463
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
+V + G+ G L A ++ + M K D + W +++ A IH G I+ +
Sbjct: 464 NTFVSNSIVFMYGKCGNLLRAREIFDRMTFK-DVISWNTVIMAYAIH---GFGRISIELF 519
Query: 486 FEL-----EPNNCGYHVLL 499
E+ EPN + LL
Sbjct: 520 SEMREKGFEPNGSTFVSLL 538
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 180/358 (50%), Gaps = 39/358 (10%)
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN-------SDNVFVDSV-- 189
RN VS T L+ YV+ + AL LF+ +C N + +F D+V
Sbjct: 58 RNSVSLTRALSSYVERGYMKNALDLFENM----RQCDTFIWNVMIRGFVDNGLFWDAVDF 113
Query: 190 --------------AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
V+ AC + E HG VIK G D ++ +GN+LI YA+
Sbjct: 114 YHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAK 173
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
G ++ + VF M +D V+WNS+I+ Y G +L F +M +++ +K + ++
Sbjct: 174 IGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREM-QASGIKLDRFSVIG 232
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
+L A + G LR GK IH Q+++ LE V+V TS++DMY KCG++D A + F+Q+ +K+
Sbjct: 233 ILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKS 292
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWL 414
+ +W AMI GY ++ ++ E+ KM + G + P++IT +++L C+ + L
Sbjct: 293 IVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAI-----LL 347
Query: 415 NTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
H F I G + +VD+ G GKLK A L M + + + W +++ +
Sbjct: 348 GKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNER-NLISWNAMIAS 404
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 115/240 (47%), Gaps = 20/240 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+++ N+ SWN++IA + G++ +A+ F + +L P +T + + + L L
Sbjct: 390 MNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREA 449
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H + FVS++++ MY KCG L AR++FD + ++++SW +++ Y
Sbjct: 450 EQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMT--FKDVISWNTVIMAYA 507
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ R ++ LF E + E G++ S+L +CS + V EG
Sbjct: 508 IHGFGRISIELFSEMREKGFEPNGST------------FVSLLLSCSVAGL--VNEGWEY 553
Query: 213 F-VIKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNG 268
F +KR ++ G+ + ++D R G++D ++ + M + A W S++ G
Sbjct: 554 FNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKG 613
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
+E + + T + Y + G + A F M++ + W MI G+ + +A+D ++
Sbjct: 56 VERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYH 115
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM---GHEFNIEPGVEHYGCMVDLL 437
+M GVR + T+ V+ AC + EG + G + +I G ++ +
Sbjct: 116 RMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIG----NSLIIMY 171
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ G ++ A + M V+ D V W S++
Sbjct: 172 AKIGCIESAEMVFREMPVR-DLVSWNSMI 199
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/589 (36%), Positives = 344/589 (58%), Gaps = 34/589 (5%)
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDE 133
ST+ + +C L + K+ GF D++V + ++ ++ KCG + DARKLFDE
Sbjct: 118 STYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDE 177
Query: 134 IPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
+P++ ++ SW +M+ G+V + N EA LF + EE G S +
Sbjct: 178 MPEK--DMASWMTMIGGFVDSGNFSEAFGLFL-CMWEEFNDG-----------RSRTFTT 223
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
++ A + + + V H +KRG + V LID Y++ G ++ + VFD M EK
Sbjct: 224 MIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKT 283
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V WNSIIA YA +G + EAL + +M + + K + T+S V+ A L L K H
Sbjct: 284 TVGWNSIIASYALHGYSEEALSFYYEM-RDSGAKIDHFTISIVIRICARLASLEYAKQAH 342
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+++ + ++ T+++D Y K G+++ A FN+M+ KNV SW A+IAGYG H +
Sbjct: 343 AALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGE 402
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
EA+++F +M++ G+ PN++TF++VLSACS++GL + GW +M + ++P HY CM
Sbjct: 403 EAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 462
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
V+LLGR G L EAY+LI K +W +LL ACR+H+N++LG++AA+ L+ +EP
Sbjct: 463 VELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKL 522
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
+++L N+Y ++G+ ++ +K + L P + +E++ + +AFL GDK H Q +
Sbjct: 523 CNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTK 582
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------- 599
+IYE + + V++ GYV + +++ DVD+EE+ + L+ HSEKLA
Sbjct: 583 EIYEKVNNMMVEISRHGYVEENKALLPDVDEEEQRI-LKYHSEKLAIAFGLINTPHWTPL 641
Query: 600 ----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
RVCGDCH+ I+ I+ V REIVVRD+ RFH+F+DG CSCGDYW
Sbjct: 642 QITQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 151/336 (44%), Gaps = 54/336 (16%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +K V WNS+IA A G S EAL + MR T I+ C+ L
Sbjct: 275 VFDQMPEKTTV-GWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLA 333
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L KQAH G+ D+ ++AL+D YSK G + DA +F+ + R +N++SW ++
Sbjct: 334 SLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRM--RRKNVISWNAL 391
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + EA+ +F++ L E + + V +VLSACS +G++
Sbjct: 392 IAGYGNHGQGEEAVEMFEQMLRE------------GMIPNHVTFLAVLSACS---YSGLS 436
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
E RG++ + + +R D ++ A+ + ++ + +
Sbjct: 437 E--------RGWE--------IFYSMSR-----------DHKVKPRAMHYACMVELLGRE 469
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE--SV 325
GL EA ++++S K + +L A L LGK + + M+ E+ +
Sbjct: 470 GLLDEAY----ELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCNY 525
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
IV ++++Y G++ A +K K +R A
Sbjct: 526 IV---LLNLYNSSGKLKEAAGVLQTLKRKGLRMLPA 558
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/481 (43%), Positives = 289/481 (60%), Gaps = 19/481 (3%)
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
+ +F DS +VL + +++ + + H +I+ GF+S V V L++ Y V
Sbjct: 136 NGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSD 195
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R+VFD + +++ V+WN++I Y N + + +DVF +M + K VT+ VLLA A
Sbjct: 196 ARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREM-QIAGAKPVEVTMVGVLLACA 254
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
HLG L G+ I D + L +V VGT++IDMY KCG VD A K F M+ KNV +W
Sbjct: 255 HLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNV 314
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
+I+GY M+ R AL F +MI +P+ +TF+ VL AC H GLV EG + +M EF
Sbjct: 315 LISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEF 374
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
+ P +EHYGCMVDLLGRAG L EA LI+ M ++ D ++W LLGACRIH N+ LGE A
Sbjct: 375 GLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGEFA 434
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
KKL ELEPNN +VLL+N+YA RW+ V R +M RR+ K PG S +E+ V+
Sbjct: 435 IKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEIDNVVYE 494
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
F+V + P E++Y+ L ++N KL+ GYV D +D+++EEKE +L HSEKLA
Sbjct: 495 FVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTGMASYDIEEEEKEHSLMYHSEKLALA 554
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
NLR+C DCH +++SKV R+I VRD RFH+F G CSC DY
Sbjct: 555 FGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYRRDISVRDRNRFHHFVGGACSCKDY 614
Query: 644 W 644
W
Sbjct: 615 W 615
>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 241/589 (40%), Positives = 331/589 (56%), Gaps = 69/589 (11%)
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL 168
FV +AL+DMY+KCG++ DA K+F+ + R +++V+W +M+TGY QN +AL LF +
Sbjct: 75 FVGNALVDMYAKCGKMEDASKVFERM--RFKDVVTWNAMVTGYSQNGRFEDALSLFGKMR 132
Query: 169 LEESECG--------------GASENSDNVF---------VDSVAIASVLSACSRVTVNG 205
E+ E G + +VF + V + S+LSAC+ V
Sbjct: 133 EEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALL 192
Query: 206 VTEGAHGFVIKRGFDSE-------VGVGNTLIDAYARGGHVDVSRKVFDGMIEKD--AVT 256
+ H + +K E + V N LID YA+ ++V+R +FD + KD VT
Sbjct: 193 HGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVT 252
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTD-VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
W +I YAQ+G A AL +F +M K + + N T+S VL+A A L L+ GK IH
Sbjct: 253 WTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAY 312
Query: 316 VIKMDLEES--VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
V++ +S + V +IDMY K G VD A+ F+ M ++N SWT+++ GYGMH
Sbjct: 313 VLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMH---- 368
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
A + + ITF+ VL ACSH+G+V G M +F ++PGVEHY CM
Sbjct: 369 ----------GAALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACM 418
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
DL GRAG+L EA LI M ++ VVW +LL ACR H N +L E AAKKL EL+ +N
Sbjct: 419 ADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNEELAEFAAKKLLELKADND 478
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
G + LLSNIYANA RW+DV R R LMK + K PG+S V+ R + F VGD+ H Q +
Sbjct: 479 GTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVKGRKGMETFYVGDRTHLQSQ 538
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------- 599
KIYE L +L +++ +GYV +HDVD EEK L HSEKLA
Sbjct: 539 KIYETLADLIKRIKAIGYVPQTNFSLHDVDDEEKGDQLLEHSEKLALAYAILTLPPGAPI 598
Query: 600 ----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGD H+ I IS +V+ EI++RDS RFH FK+G CSC YW
Sbjct: 599 RITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 647
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 187/387 (48%), Gaps = 47/387 (12%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKN---NVFSWNSVIADLARGGDSVEA 57
M+ + +++V+ ++ + +LF K ++ +V +W+SVI+ A+ G EA
Sbjct: 100 MRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEA 159
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIF---GFHR----DVFV 110
+ F M P T + +C+++ L GK+ H + F G H D+ V
Sbjct: 160 MDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAV 219
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+ALIDMY+KC L AR +FDEI + R++V+WT M+ GY Q+ +A AL LF E
Sbjct: 220 INALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMF-- 277
Query: 171 ESECGGASENSDNVFV-DSVAIASVLSACSRVTVNGVTEGAHGFVIKRG-FDSEV-GVGN 227
DN V + I+ VL AC+R+ + H +V++R DS+V V N
Sbjct: 278 ---------KIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVAN 328
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
LID Y++ G VD ++ VFD M +++AV+W S++ Y +G AA LD
Sbjct: 329 CLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHG-AALVLD------------ 375
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS----IIDMYCKCGQVDL 343
+T VL A +H G++ G D +M + V G + D++ + G++
Sbjct: 376 --GITFLVVLYACSHSGMVDRGI---DLFYRMSKDFVVDPGVEHYACMADLFGRAGRLCE 430
Query: 344 ARKAFNQMK-EKNVRSWTAMIAGYGMH 369
A + N M E W A+++ H
Sbjct: 431 ATRLINDMSMEPTPVVWIALLSACRTH 457
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 166/378 (43%), Gaps = 80/378 (21%)
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
VSW S+++ Y +A+ LF+E + + D+V + ++L
Sbjct: 24 VSWNSIVSVYSHCFVPNDAVFLFREMTV-----------GYGILPDTVGVVNILP----- 67
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN--- 258
G GF VGN L+D YA+ G ++ + KVF+ M KD VTWN
Sbjct: 68 -----VSGFLGFF----------VGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMV 112
Query: 259 --------------------------------SIIAIYAQNGLAAEALDVFDQMVKSTDV 286
S+I+ YAQ G EA+DVF QM
Sbjct: 113 TGYSQNGRFEDALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMC-GCRC 171
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE-------ESVIVGTSIIDMYCKCG 339
+ N VTL ++L A A +G L GK H +K L+ + + V ++IDMY KC
Sbjct: 172 RPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCK 231
Query: 340 QVDLARKAFNQM--KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG--VRPNYITFV 395
+++AR F+++ K+++V +WT MI GY H A AL LF +M K + PN T
Sbjct: 232 SLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTIS 291
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG-CMVDLLGRAGKLKEAYDLIEGMK 454
VL AC+ ++ G + I+ V C++D+ ++G + A + + M
Sbjct: 292 CVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS 351
Query: 455 VKADFVVWGSLLGACRIH 472
K + V W SLL +H
Sbjct: 352 -KRNAVSWTSLLTGYGMH 368
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 20/153 (13%)
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
+V+WNSI+++Y+ + +A+ +F +M + + V + +L LG
Sbjct: 23 SVSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPVSGFLGFF------- 75
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
VG +++DMY KCG+++ A K F +M+ K+V +W AM+ GY + R
Sbjct: 76 -------------VGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFE 122
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
+AL LF KM + + + +T+ SV+S + G
Sbjct: 123 DALSLFGKMREEKIELDVVTWSSVISGYAQRGF 155
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/631 (36%), Positives = 353/631 (55%), Gaps = 50/631 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW +++ + G EA F M P R+ + + D
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRM------PERNEVSWTVMFGGLIDDGRID 158
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K ++ + +DV S+ +I + G + +AR +FDE+ R RN+V+WT+M+TGY
Sbjct: 159 KA--RKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEM--RERNVVTWTTMITGYR 214
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN+ A LF E + E++E V+ S+L T++G E A
Sbjct: 215 QNNRVDVARKLF-EVMPEKTE---------------VSWTSMLLG---YTLSGRIEDAEE 255
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
F + N +I + G + +R+VFD M ++D TW +I Y + G E
Sbjct: 256 FFEVMPMKPVIAC-NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELE 314
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
ALD+F QM K V+ + +L ++L A L L+ G+ +H +++ ++ V V + ++
Sbjct: 315 ALDLFAQMQKQ-GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLM 373
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
MY KCG++ A+ F++ K++ W ++I+GY H EAL +F++M +G PN +
Sbjct: 374 TMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKV 433
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
T +++L+ACS+AG ++EG +M +F + P VEHY C VD+LGRAG++ +A +LIE
Sbjct: 434 TLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIES 493
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M +K D VWG+LLGAC+ H +DL E+AAKKLFE EP+N G +VLLS+I A+ +W DV
Sbjct: 494 MTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDV 553
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD-KEHPQHEKIYEYLEELNVKLQEVGY 571
R M+ ++K PG S +E+ KVH F G K HP+ I LE+ + L+E GY
Sbjct: 554 AVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGY 613
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
D + V+HDVD+EEK +L HSE+LA NLRVCGDCH I+L
Sbjct: 614 SPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKL 673
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
ISKV +REI++RD+ RFH+F +G CSC DYW
Sbjct: 674 ISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 193/417 (46%), Gaps = 35/417 (8%)
Query: 112 SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
++++ Y G +AR+LFDE+ +R N+VSW +++GY++N EA +F E + E
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSER--NVVSWNGLVSGYIKNRMIVEARNVF-ELMPER 108
Query: 172 SECGGASENSDNVFVDSVAIASVL--------SACSRVTVNGVTEGAHGFVIKRGFD--- 220
+ + + V A L V G+ + ++ +D
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMP 168
Query: 221 -SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+V +I R G VD +R +FD M E++ VTW ++I Y QN A +F+
Sbjct: 169 VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEV 228
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M + T+ V+ +++LL G + + +V+ M + VI ++I + + G
Sbjct: 229 MPEKTE-----VSWTSMLLGYTLSGRIEDAEEFF-EVMPM---KPVIACNAMIVGFGEVG 279
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
++ AR+ F+ M++++ +W MI Y EALDLF +M K GVRP++ + +S+LS
Sbjct: 280 EISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILS 339
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
C+ +Q G ++ + V ++ + + G+L +A + + K D
Sbjct: 340 VCATLASLQYG-RQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK-DI 397
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELE-----PNNCGYHVLLSNIYANAGRWED 511
++W S++ H LGE A K E+ PN +L+ + AG+ E+
Sbjct: 398 IMWNSIISGYASH---GLGEEALKIFHEMPSSGTMPNKVTLIAILTAC-SYAGKLEE 450
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 155/356 (43%), Gaps = 76/356 (21%)
Query: 115 IDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESEC 174
I S+ G++++ARK FD + + + I SW S+++GY N +EA LF E
Sbjct: 24 ISRLSRIGKINEARKFFDSL--QFKAIGSWNSIVSGYFSNGLPKEARQLFDE-------- 73
Query: 175 GGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYA 234
+S + V+ NG L+ Y
Sbjct: 74 --------------------MSERNVVSWNG-----------------------LVSGYI 90
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
+ + +R VF+ M E++ V+W +++ Y Q G+ EA +F +M + N V+ +
Sbjct: 91 KNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER-----NEVSWT 145
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
+ + G + + ++D + D V+ T++I C+ G+VD AR F++M+E+
Sbjct: 146 VMFGGLIDDGRIDKARKLYDMMPVKD----VVASTNMIGGLCREGRVDEARLIFDEMRER 201
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
NV +WT MI GY R +D+ K+ + +++ S+L + +G +++ +
Sbjct: 202 NVVTWTTMITGY----RQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 415 NTMGHEFNIEPGVEHYGCMVDL--LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
M ++P + +V +G K + +DL+E D W ++ A
Sbjct: 258 EVM----PMKPVIACNAMIVGFGEVGEISKARRVFDLME----DRDNATWRGMIKA 305
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 62/312 (19%)
Query: 213 FVIKRGFDSEVGVGNTL-IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+++R + + GV + I +R G ++ +RK FD + K +WNSI++ Y NGL
Sbjct: 6 LILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPK 65
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA +FD+M E +V+ +
Sbjct: 66 EARQLFDEMS----------------------------------------ERNVVSWNGL 85
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ Y K + AR F M E+NV SWTAM+ GY EA LF++M + N
Sbjct: 86 VSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NE 141
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP--GVEHYGCMVDLLGRAGKLKEAYDL 449
+++ + GL+ +G ++ +++ P V M+ L R G++ EA +
Sbjct: 142 VSWTVMF-----GGLIDDG--RIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLI 194
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP--NNCGYHVLLSNIYANAG 507
+ M+ + + V W +++ R + VD+ A+KLFE+ P + +L Y +G
Sbjct: 195 FDEMRER-NVVTWTTMITGYRQNNRVDV----ARKLFEVMPEKTEVSWTSMLLG-YTLSG 248
Query: 508 RWEDVERTRSLM 519
R ED E +M
Sbjct: 249 RIEDAEEFFEVM 260
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/571 (38%), Positives = 337/571 (59%), Gaps = 16/571 (2%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+++V+ K ++ LFN D NV +WN +IA + G EA FS M +
Sbjct: 112 NALVAMYSKFGQLSDALKLFNTMPD-TNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGV 170
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
+P TF + S + L GK+ H G DVF+ SALID+Y KC ++ A K
Sbjct: 171 SPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACK 230
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F + +IV T++++GYV N +AL +F+ +LLEE + ++V
Sbjct: 231 IFKQSTNV--DIVVCTAIISGYVLNGLNNDALEIFR-WLLEE-----------KMSPNAV 276
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
+ASVL AC+ + + + H ++K G D VG+ ++D YA+ G +D++ ++F M
Sbjct: 277 TLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRM 336
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
EKDAV WN+II +QNG EA+D+F QM + + + V++SA L A A+L L G
Sbjct: 337 PEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGRE-GLSYDCVSISAALSACANLPALHHG 395
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K IH +IK + V +++IDMY KCG + +AR F+ M+EKN SW ++IA YG H
Sbjct: 396 KAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSH 455
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
+L LF+KM++ G++P+++TF+++LSAC HAG V +G + M E+ I +EH
Sbjct: 456 GHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEH 515
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
Y C+VDL GRAG+L EA++ I+ M D VWG+LLGACR+H NV+L E+A++ L +L+
Sbjct: 516 YACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLD 575
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
P N G +VLLSN++A+AG+W V + RSLMK R + K PG+S +E+ H F+ D H
Sbjct: 576 PENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSH 635
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIH 580
P+ +IY L L ++L++ GY +H
Sbjct: 636 PESAQIYSVLNNLLLELRKEGYCPKPYLPMH 666
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 151/479 (31%), Positives = 250/479 (52%), Gaps = 28/479 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K +K+ V WN ++ + G+ A++ F MR P TF + C++
Sbjct: 29 LFDKMPNKDCVL-WNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEA 87
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G Q H GFH D V++AL+ MYSK G+LSDA KLF+ +P N+V+W M
Sbjct: 88 LSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPD--TNVVTWNGM 145
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+VQN EA LLF E + S V DS+ AS L + +
Sbjct: 146 IAGFVQNGFMDEASLLFSEMI------------SAGVSPDSITFASFLPSVTESASLKQG 193
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG++++ G +V + + LID Y + V ++ K+F D V +II+ Y N
Sbjct: 194 KEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLN 253
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL +AL++F +++ + NAVTL++VL A A L L LGK +H ++K L+E V
Sbjct: 254 GLNNDALEIFRWLLEEK-MSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHV 312
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G++I+DMY KCG++DLA + F +M EK+ W A+I + + +EA+DLF +M + G+
Sbjct: 313 GSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGL 372
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKL 443
+ ++ + LSAC++ + G H F I+ + ++D+ G+ G L
Sbjct: 373 SYDCVSISAALSACANLPALHHG-----KAIHSFMIKGAFDSEVFAESALIDMYGKCGNL 427
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--LEPNNCGYHVLLS 500
A + + M+ K + V W S++ A H ++++ K+ E ++P++ + +LS
Sbjct: 428 SVARCVFDMMREKNE-VSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILS 485
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 196/369 (53%), Gaps = 21/369 (5%)
Query: 103 GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
GF+ D FV S+LI +Y++ G + DAR+LFD++P ++ V W ML G+V+ A+
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPN--KDCVLWNVMLNGFVKCGEPNSAVK 59
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE 222
+F++ +++ +S+ ASVLS C+ ++ HG VI GF +
Sbjct: 60 VFEDMRNCQTK------------PNSITFASVLSICASEALSEFGNQLHGLVISCGFHFD 107
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
V N L+ Y++ G + + K+F+ M + + VTWN +IA + QNG EA +F +M+
Sbjct: 108 PLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMI- 166
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
S V +++T ++ L ++ L+ GK IH +++ + V + +++ID+Y KC V
Sbjct: 167 SAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVG 226
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
+A K F Q ++ TA+I+GY ++ +AL++F +++ + PN +T SVL AC+
Sbjct: 227 MACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACA 286
Query: 403 HAGLVQEGWHW-LNTMGHEFNIEPGVEHYG-CMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
+ G N + H + H G ++D+ + G+L AY + M K D V
Sbjct: 287 GLATLNLGKELHANILKHGLDER---RHVGSAIMDMYAKCGRLDLAYQIFRRMPEK-DAV 342
Query: 461 VWGSLLGAC 469
W +++ C
Sbjct: 343 CWNAIITNC 351
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/585 (39%), Positives = 335/585 (57%), Gaps = 55/585 (9%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS--KCGELSDARKLFDEIPQR 137
++ CS + +L +Q H Q G D +S L+ + G L+ AR +FD I +
Sbjct: 25 LQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRP 81
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
N W +M+ GY + EALLL+ L +V ++ +L A
Sbjct: 82 --NTFMWNTMIRGYSNSKEPEEALLLYHHMLYH------------SVPHNAYTFPFLLKA 127
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
CS ++ T+ H +IK GF SE+ N+L++ Y++ G + +R +FD + ++D
Sbjct: 128 CSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT--- 184
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
EAL++F +M ++ +K + V L + L A A LGVL GK IH +
Sbjct: 185 --------------EALNLFHRM-QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIK 229
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
K ++E I+G +IDMY KCG ++ A + F +M+EK V WTAMI+GY +H R REAL+
Sbjct: 230 KHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALE 289
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
F KM AGV PN +TF +L+ACSHAGLV E +M +P +EHYGCMVDLL
Sbjct: 290 WFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLL 349
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GRAG LKEA +LIE M VK + +WG+LL AC IH N++LG+ K L +++P + G ++
Sbjct: 350 GRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYI 409
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
L++I+A AG W R R MK + ++K PG S++ + G H FL GD+ HPQ ++I
Sbjct: 410 HLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDH 469
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
LE++ +L+E GY + ++ D++ +EKE + HSEKLA
Sbjct: 470 MLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVK 529
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHTVI+LISKV REI++RD RFH FKDG C+CGDYW
Sbjct: 530 NLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 574
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 168/345 (48%), Gaps = 35/345 (10%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
T+F++ + + N F WN++I + + EAL + M S+ TFP +K+CS++
Sbjct: 73 TVFDR-IFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSM 131
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L +Q H GF +++ +++L+++YSK G++ AR LFD++ QR
Sbjct: 132 SALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQR--------- 182
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
EAL LF + + +D+VA+ S L AC+ + V
Sbjct: 183 ----------DTEALNLFHRM------------QTAGIKLDNVALVSTLQACADLGVLDQ 220
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H ++ K + + +G LID YA+ G ++ + +VF M EK W ++I+ YA
Sbjct: 221 GKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAI 280
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEESV 325
+G EAL+ F +M ++ V+ N +T + +L A +H G++ K + + + ++ + S+
Sbjct: 281 HGRGREALEWFMKM-QTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSI 339
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMH 369
++D+ + G + A + M K N W A++ +H
Sbjct: 340 EHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIH 384
>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
Length = 641
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/543 (41%), Positives = 327/543 (60%), Gaps = 33/543 (6%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G H Q G D S+ L++MYSKCG + ARKLFDE+P +R++VSW +M+ +
Sbjct: 66 GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP--VRSLVSWNTMVGSH 123
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
QN ++ +AL+LF + E C ++SV+ AC+ + H
Sbjct: 124 TQNGDSEKALVLFMQMQKEGISC------------SEFTVSSVVCACAAKCCVFECKQLH 171
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
GF +K DS V VG L+D YA+ G V + VF+ M E+ VTW+S++A Y QN L
Sbjct: 172 GFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYE 231
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EAL +F + ++ ++ N T+S+ L A A L GK + + K + ++ V +S+
Sbjct: 232 EALVLFHR-AQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSL 290
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
IDMY KCG ++ A F+ ++EKNV W AM++G+ H R+ EA+ F KM + G+ PN
Sbjct: 291 IDMYAKCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNE 350
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
IT++SVL+ACSH GLV++G + + M N+ P V HY CMVD+LGRAG L EA DLI+
Sbjct: 351 ITYISVLTACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLID 410
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M A +WGSLL +CRI++N++ E+AAK LFE+EP+N G HVLLSNIYA RWE+
Sbjct: 411 RMPFDATASMWGSLLASCRIYRNLEXAEVAAKHLFEIEPHNAGNHVLLSNIYAANNRWEE 470
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
V R R+L+K + K G S +E++ KVH+F+VG++ HP+ +IY LE+L +++++GY
Sbjct: 471 VARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGY 530
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
+HDV++ K+ LR HSEKLA NLR+CGDCH+ ++L
Sbjct: 531 KAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKL 590
Query: 614 ISK 616
S+
Sbjct: 591 ASR 593
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 182/343 (53%), Gaps = 21/343 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SWN+++ + GDS +AL F M+K ++ + T + +C+A + KQ H
Sbjct: 112 SLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLH 171
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A +VFV +AL+D+Y+KCG + DA +F+ +P+ R+ V+W+SM+ GYVQN+
Sbjct: 172 GFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPE--RSDVTWSSMVAGYVQNEL 229
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EAL+LF ++ G N + A A+ + V V + K
Sbjct: 230 YEEALVLF-----HRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAV-------LCK 277
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G S + V ++LID YA+ G ++ + VF + EK+ V WN++++ ++++ + EA+
Sbjct: 278 TGIGSNIFVISSLIDMYAKCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIY 337
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMY 335
F++M + + N +T +VL A +HLG++ G+ D +I++ ++ +V+ + ++D+
Sbjct: 338 FEKM-QQMGICPNEITYISVLTACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDIL 396
Query: 336 CKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALD 377
+ G + A+ ++M + W +++A CR L+
Sbjct: 397 GRAGLLHEAKDLIDRMPFDATASMWGSLLAS----CRIYRNLE 435
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V++ NV WN++++ +R S+EA+ F M+++ + P T+ + +CS L + G
Sbjct: 310 VEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHLGLVEKG 369
Query: 93 KQAHQQAF-IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
++ + +V S ++D+ + G L +A+ L D +P
Sbjct: 370 RKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMP 413
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 245/643 (38%), Positives = 357/643 (55%), Gaps = 55/643 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF + + +V SWNS+I GD V A + F M P R+ + S + L
Sbjct: 108 LFRR-IPFKDVVSWNSIIKGCLHCGDIVTARKLFDEM------PRRT-----VVSWTTLV 155
Query: 88 D--LHSGKQAHQQAFIFGFH---RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
D L G + + RDV +A+I Y G + DA +LF ++P R +++
Sbjct: 156 DGLLRLGIVQEAETLFWAMEPMDRDVAAWNAMIHGYCSNGRVDDALQLFCQMPSR--DVI 213
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
SW+SM+ G N + +AL+LF++ + + V + S + LSA +++
Sbjct: 214 SWSSMIAGLDHNGKSEQALVLFRDMV------------ASGVCLSSGVLVCGLSAAAKIP 261
Query: 203 VNGVTEGAHGFVIKRG---FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
V H V K G FD V +L+ YA ++ + +VF ++ K V W +
Sbjct: 262 AWRVGIQIHCSVFKLGDWHFDEFVSA--SLVTFYAGCKQMEAACRVFGEVVYKSVVIWTA 319
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
++ Y N EAL+VF +M++ DV N + ++ L + L + GK IH +KM
Sbjct: 320 LLTGYGLNDKHREALEVFGEMMR-IDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKM 378
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
LE VG S++ MY KCG V A F + EKNV SW ++I G H AL LF
Sbjct: 379 GLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALF 438
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
+M++ GV P+ IT +LSACSH+G++Q+ + G + ++ +EHY MVD+LGR
Sbjct: 439 NQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGR 498
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
G+L+EA ++ M +KA+ +VW +LL ACR H N+DL + AA ++FE+EP+ +VLL
Sbjct: 499 CGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLL 558
Query: 500 SNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYL 559
SN+YA++ RW +V R MK+ + K PG S + L+G+ H FL D+ HP EKIY+ L
Sbjct: 559 SNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKL 618
Query: 560 EELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NL 601
E L VKL+E+GYV D +HDV+ E+KE L HSE+LA NL
Sbjct: 619 EWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNL 678
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
RVCGDCH I+L++K+VDREIVVRDS RFH FK+G+CSCGDYW
Sbjct: 679 RVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 177/363 (48%), Gaps = 19/363 (5%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE-----SECGGAS 178
L +AR +FD+IP ++ +T ML Y QN REA+ LF+ ++ S G
Sbjct: 71 LDEARAIFDQIPTP--HVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCL 128
Query: 179 ENSDNV----FVDSVAIASVLSACSRV----TVNGVTEGAHGFVIKRGFDSEVGVGNTLI 230
D V D + +V+S + V + V E F D +V N +I
Sbjct: 129 HCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAWNAMI 188
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
Y G VD + ++F M +D ++W+S+IA NG + +AL +F MV S V ++
Sbjct: 189 HGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVAS-GVCLSS 247
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
L L A A + R+G IH V K+ D V S++ Y C Q++ A + F
Sbjct: 248 GVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFG 307
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
++ K+V WTA++ GYG++ + REAL++F +M++ V PN +F S L++C ++
Sbjct: 308 EVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIER 367
Query: 410 GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G ++ + +E G G +V + + G + +A + +G+ K + V W S++ C
Sbjct: 368 G-KVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEK-NVVSWNSVIVGC 425
Query: 470 RIH 472
H
Sbjct: 426 AQH 428
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/635 (34%), Positives = 349/635 (54%), Gaps = 36/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF + + +V SWN++IA A+ G EA+R + M + P+ TF + +CS L
Sbjct: 179 LFER-MSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLG 234
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G++ H G D+ + +AL+ MY++C L DA K+F +P+R ++VSW++M
Sbjct: 235 LLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRR--DVVSWSAM 292
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ + + D EA+ + + LE V + ASVL AC+ V
Sbjct: 293 IAAFAETDLFDEAIEFYSKMQLE------------GVRPNYYTFASVLLACASVGDLRAG 340
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H ++ G+ + G L+D Y G +D +R +FD + +D W +I Y++
Sbjct: 341 RAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ 400
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G L+++ +M +T V + S V+ A A LG + H + + ++
Sbjct: 401 GHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVL 460
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
TS+++MY + G ++ AR+ F++M ++ +WT +IAGY H AL L+ +M G
Sbjct: 461 ATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGA 520
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ +TF+ VL ACSHAGL ++G ++ ++ + P + HY C++DLL RAG+L +A
Sbjct: 521 EPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAE 580
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+LI M V+ + V W SLLGA RIHK+V AA ++ +L+P + +VLLSN++A G
Sbjct: 581 ELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTG 640
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+ R+ M R + K G S +E+ ++H F VGD HP+ ++I+ L+ L+ K++
Sbjct: 641 NLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIK 700
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E GYV + V+HDV ++EKE+ LR+HSEKLA LR+C DCH+
Sbjct: 701 EAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHS 760
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
++ IS + REI+VRDS RFH F+DG CSCGDYW
Sbjct: 761 AVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 237/471 (50%), Gaps = 27/471 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N +SW S++ A+ G AL + +++ L P + + +C+++ L G
Sbjct: 84 IARKNDYSWGSMLTAYAQNGHYRAALDLY---KRMDLQPNPVVYTTVLGACASIKALEEG 140
Query: 93 KQAHQQ-AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K H + + G DV + ++L+ MY+KCG L DA++LF+ + R++ SW +M+ Y
Sbjct: 141 KAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSG--RSVSSWNAMIAAY 198
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
Q+ + EA+ L+++ +E S SVLSACS + + H
Sbjct: 199 AQSGHFEEAIRLYEDMDVEPS---------------VRTFTSVLSACSNLGLLDQGRKIH 243
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+ RG + ++ + N L+ YAR +D + K+F + +D V+W+++IA +A+ L
Sbjct: 244 ALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFD 303
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA++ + +M + V+ N T ++VLLA A +G LR G+ +HDQ++ + +++ GT++
Sbjct: 304 EAIEFYSKM-QLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTAL 362
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP-N 390
+D+Y G +D AR F+Q++ ++ WT +I GY L+L+ +M P
Sbjct: 363 VDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPAT 422
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
I + V+SAC+ G + + + + I V +V++ R G L+ A +
Sbjct: 423 KIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATS-LVNMYSRWGNLESARQVF 481
Query: 451 EGMKVKADFVVWGSLLGACRIH--KNVDLGEIAAKKLFELEPNNCGYHVLL 499
+ M + D + W +L+ H + LG +L EP+ + V+L
Sbjct: 482 DKMSSR-DTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVL 531
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 206/394 (52%), Gaps = 36/394 (9%)
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
A++ C DL S +Q H + I G +VF+ + ++ Y KCG ++ AR FD I ++
Sbjct: 33 ALRQC---QDLESVRQIHDR--ISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARK 87
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
N SW SMLT Y QN + R AL L+K L+ + V +VL A
Sbjct: 88 --NDYSWGSMLTAYAQNGHYRAALDLYKRMDLQP---------------NPVVYTTVLGA 130
Query: 198 CSRVTVNGVTEGAHGFVI-KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
C+ + + H + +G +V + N+L+ YA+ G ++ ++++F+ M + +
Sbjct: 131 CASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSS 190
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
WN++IA YAQ+G EA+ +++ M DV+ + T ++VL A ++LG+L G+ IH +
Sbjct: 191 WNAMIAAYAQSGHFEEAIRLYEDM----DVEPSVRTFTSVLSACSNLGLLDQGRKIHALI 246
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
E + + +++ MY +C +D A K F ++ ++V SW+AMIA + EA+
Sbjct: 247 SSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAI 306
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM---GHEFNIEPGVEHYGCM 433
+ + KM GVRPNY TF SVL AC+ G ++ G + + G++ + G +
Sbjct: 307 EFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGT----AL 362
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
VDL G L EA L + ++ + D +W L+G
Sbjct: 363 VDLYTSYGSLDEARSLFDQIENR-DEGLWTVLIG 395
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 136/256 (53%), Gaps = 24/256 (9%)
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
+ V +GN ++ AY + G V +R FD + K+ +W S++ YAQNG ALD++ +M
Sbjct: 56 ANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM 115
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV-----IKMDLEESVIVGTSIIDMY 335
D++ N V + VL A A + L GK IH ++ +K+D VI+ S++ MY
Sbjct: 116 ----DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLD----VILENSLLTMY 167
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG ++ A++ F +M ++V SW AMIA Y EA+ L+ M V P+ TF
Sbjct: 168 AKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFT 224
Query: 396 SVLSACSHAGLVQEGWH---WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
SVLSACS+ GL+ +G +++ G E ++ ++ + R L +A + +
Sbjct: 225 SVLSACSNLGLLDQGRKIHALISSRGTELDLSL----QNALLTMYARCKCLDDAAKIFQR 280
Query: 453 MKVKADFVVWGSLLGA 468
+ + D V W +++ A
Sbjct: 281 LP-RRDVVSWSAMIAA 295
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 12 VVSNVDKHSTNTNLTT---LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
S V+ +S NL + +F+K + + +W ++IA A+ G+ AL + M
Sbjct: 461 ATSLVNMYSRWGNLESARQVFDK-MSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEG 519
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAH-QQAFI-----FGFHRDVFVSSALIDMYSKCG 122
P+ TF + +CS H+G Q +Q FI + H ++ S +ID+ S+ G
Sbjct: 520 AEPSELTFMVVLYACS-----HAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAG 574
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSML 148
LSDA +L + +P N V+W+S+L
Sbjct: 575 RLSDAEELINAMPVE-PNDVTWSSLL 599
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/575 (39%), Positives = 332/575 (57%), Gaps = 23/575 (4%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKN-NVFSWNSVIADLARGGDSVEALRAFSSMRK 66
+++S+++ K S + +FN N NVF++N++IA AL ++ MR
Sbjct: 66 AITSLINMYSKCSLIDHSLRVFNFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRH 125
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
L + P + TFPC I++C D + H F G DVFV SAL++ Y K + +
Sbjct: 126 LGIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGE 185
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
A ++F+E+P +R++V W +M+ G+ Q EAL +F+ GG + V
Sbjct: 186 AYRVFEELP--VRDVVLWNAMVNGFAQIGRFEEALGVFRRM-------GG-----NGVVP 231
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
+ VLS S + HGFV K G++S V V N LID Y + V + VF
Sbjct: 232 CRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVF 291
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ M E D +WNSI++++ + G L +FD+M+ S+ V+ + VT++ VL A HL L
Sbjct: 292 EMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAAL 351
Query: 307 RLGKCIHDQVI--------KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
G+ IH ++ D+ + V++ +++DMY KCG + AR F M+EK+V S
Sbjct: 352 MHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVAS 411
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
W MI GYGMH EALD+F +M +A + PN I+FV +LSACSHAG+V+EG +L+ M
Sbjct: 412 WNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEME 471
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
++ + P +EHY C++D+L RAG+L EAYDL+ M KAD V W SLL ACR+H + DL
Sbjct: 472 SKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAACRLHNDTDLA 531
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
E+AA K+ ELEP++CG +VL+SN+Y GR+E+V R MK + + K PG S +EL
Sbjct: 532 EVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVLEWRYTMKQQNVKKRPGCSWIELVNG 591
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
VH F+ GD+ HPQ E IY L L LQE GYV
Sbjct: 592 VHVFITGDRTHPQTEYIYAGLNSLTAVLQEHGYVP 626
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 194/404 (48%), Gaps = 28/404 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++SC+ +L GK+ H F ++LI+MYSKC + + ++F+ +
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHHNK 95
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+ ++ +++ G++ N + AL L+ + + D V+ AC
Sbjct: 96 NVFAYNALIAGFLANALPQRALALYNQM------------RHLGIAPDKFTFPCVIRACG 143
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
V HG + K G + +V VG+ L++ Y + V + +VF+ + +D V WN+
Sbjct: 144 DDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNA 203
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
++ +AQ G EAL VF +M + V C T++ VL + +G G+ +H V KM
Sbjct: 204 MVNGFAQIGRFEEALGVFRRMGGNGVVPCR-YTVTGVLSIFSVMGDFDNGRAVHGFVTKM 262
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE---AL 376
E V+V ++IDMY KC V A F M E ++ SW ++++ +H R + L
Sbjct: 263 GYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMS---VHERCGDHYGTL 319
Query: 377 DLFYKMIKAG-VRPNYITFVSVLSACSH-AGLVQ----EGWHWLNTMGHE--FNIEPGVE 428
LF +M+ + V+P+ +T +VL AC+H A L+ G+ +N + E ++ V
Sbjct: 320 RLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVL 379
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++D+ + G +++A + M+ K D W ++ +H
Sbjct: 380 LNNALMDMYAKCGNMRDARMVFVNMREK-DVASWNIMITGYGMH 422
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN-- 349
T A L + AH L GK +H ++K S + TS+I+MY KC +D + + FN
Sbjct: 31 TCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFP 90
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS--HAGLV 407
KNV ++ A+IAG+ + + AL L+ +M G+ P+ TF V+ AC G V
Sbjct: 91 THHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFV 150
Query: 408 QEGWHWLN-TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
H L +G E ++ G +V+ + + EAY + E + V+ D V+W +++
Sbjct: 151 VTKIHGLMFKVGLELDVFVG----SALVNTYLKFRFVGEAYRVFEELPVR-DVVLWNAMV 205
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/594 (39%), Positives = 347/594 (58%), Gaps = 38/594 (6%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P + +++ L+ LH Q H + G+ R + + L+++ G +S R++
Sbjct: 10 PHSPAYNFLLQAGPRLYLLH---QVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQI 66
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDN-AREALLLFKEFLLEESECGGASENSDNVFVDSV 189
F +P + +TS++ ++ N + +L + +L NV +
Sbjct: 67 FLAVPNP--DSFLFTSLIKSTSKSHNFSIYSLYFYSRMVL------------SNVSPSNY 112
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
SV+ +C+ ++ HG V+ GF +V V L+ Y + G + +RKVFD +
Sbjct: 113 TFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKI 172
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
E+ V WNS+I+ Y QNG A EA+ +FD+M K T V+ ++ T +VL A AHLG LG
Sbjct: 173 RERSIVAWNSMISGYEQNGFAKEAIGLFDRM-KETGVEPDSATFVSVLSACAHLGAFSLG 231
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
+H+ ++ L+ +V++GTS+I+MY +CG V AR+ F+ MKE+NV +WTAMI+GYG +
Sbjct: 232 CWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTN 291
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
+A++LF++M + G+ PN ITFV+VLSAC+HAGLV EG ++ E+++ PGVEH
Sbjct: 292 GYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEH 351
Query: 430 YGCMVDLLGRAGKLKEAYDLI-EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
C+VD+LGRAG L EAY+ I E + + ++LGAC++HKN DLG A+ L
Sbjct: 352 NVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVAEHLLAA 411
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
EP N ++V+LSNIYA AGR + VE R+ M + L K G+S VE+ K + F +GDK
Sbjct: 412 EPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVGYSTVEVDQKTYLFSMGDKS 471
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
H + IY YL+EL K E GYV SV+H++++EE+E LR HSEKLA
Sbjct: 472 HSETNAIYHYLDELMWKCSEAGYVPVSDSVMHELEEEEREYALRYHSEKLAIAFGLLKTS 531
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH+ I+ IS + REI+VRD RFH+FK G CSC DYW
Sbjct: 532 HGTPIRIVKNLRMCEDCHSAIKFISAISSREIIVRDKLRFHHFKVGSCSCLDYW 585
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 188/344 (54%), Gaps = 25/344 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGD-SVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS 91
V + F + S+I ++ + S+ +L +S M +++P+ TF IKSC+ L L
Sbjct: 70 VPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKH 129
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ H + GF DV+V +AL+ +Y KCG+L +ARK+FD+I R R+IV+W SM++GY
Sbjct: 130 GRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKI--RERSIVAWNSMISGY 187
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
QN A+EA+ LF E G V DS SVLSAC+ + + H
Sbjct: 188 EQNGFAKEAIGLFDRM----KETG--------VEPDSATFVSVLSACAHLGAFSLGCWVH 235
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+++ G D V +G +LI+ Y R G+V +R+VFD M E++ V W ++I+ Y NG +
Sbjct: 236 EYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGS 295
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESVIVGTS 330
+A+++F +M + + N++T AVL A AH G++ G+ + + + L V
Sbjct: 296 QAVELFHEM-RRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVC 354
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRS-----WTAMIAGYGMH 369
++DM + G +D +A+N +KE+ + TAM+ MH
Sbjct: 355 LVDMLGRAGLLD---EAYNFIKEEIPENPAPAILTAMLGACKMH 395
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 114/220 (51%), Gaps = 20/220 (9%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N +F+K + + ++ +WNS+I+ + G + EA+ F M++ + P +TF + +C
Sbjct: 164 NARKVFDK-IRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSAC 222
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ L G H+ G +V + ++LI+MY +CG +S AR++FD + + RN+V+
Sbjct: 223 AHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKE--RNVVA 280
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
WT+M++GY N +A+ LF E + +F +S+ +VLSAC+ +
Sbjct: 281 WTAMISGYGTNGYGSQAVELFHEM------------RRNGLFPNSITFVAVLSACAHAGL 328
Query: 204 NGVTEGAHGFV-IKRGFDSEVGVGNT--LIDAYARGGHVD 240
V EG F I+ + GV + L+D R G +D
Sbjct: 329 --VNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLD 366
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/574 (38%), Positives = 330/574 (57%), Gaps = 34/574 (5%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L G Q H FG VS LI++YSK + ++FDE P++ + +W+S++
Sbjct: 41 LRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKK--SSTTWSSVI 98
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
+ + QN+ AL F+ L +D V D S AC + + V +
Sbjct: 99 SAFAQNEAPLLALQFFRRML------------NDGVRPDDHIYPSATKACGFLRRSDVGK 146
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H +K G+ +V VG++L+D YA+ G + +R +FD M E++ V+W+ +I YAQ
Sbjct: 147 SVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLD 206
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
EAL +F Q + DV N T S+V+ + L LGK IH +KM + S VG
Sbjct: 207 DGVEALTLFKQALIE-DVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVG 265
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
+++I +Y KCG ++ A + F+++ +N+ W +M+ H + LF +M G++
Sbjct: 266 SALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMK 325
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
PN+I+F+SVL ACSHAGLV++G + + M ++ IEP EHY +VDLLGRAGKL+EA
Sbjct: 326 PNFISFLSVLYACSHAGLVEKGREYFSLM-RDYGIEPETEHYASLVDLLGRAGKLQEAVS 384
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
+I+ M ++ VWG+LL CRIHK+ ++ A ++ E++ ++ G HVLLSN YA AGR
Sbjct: 385 VIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGR 444
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
+E+ R R ++++R + K G S VE KVH F GD+ H + +IYE LEEL ++++
Sbjct: 445 YEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEK 504
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
GYV D + V+ VD EEK T+R HSE+LA NLRVCGDCH
Sbjct: 505 AGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAA 564
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+ +SK R ++VRD+ RFH F+DG CSCGDYW
Sbjct: 565 IKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 177/336 (52%), Gaps = 16/336 (4%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K + +W+SVI+ A+ + AL+ F M + P +P A K+C L GK
Sbjct: 88 KKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKS 147
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H A G++ DVFV S+L+DMY+KCGE+ DAR LFDE+P+ RN+VSW+ M+ GY Q
Sbjct: 148 VHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPE--RNVVSWSGMIYGYAQL 205
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
D+ EAL LFK+ L+E+ V V+ +SV+ CS T + + HG
Sbjct: 206 DDGVEALTLFKQALIED------------VDVNDFTFSSVIRVCSSSTFLELGKLIHGLC 253
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+K FDS VG+ LI Y++ G ++ + +VFD + ++ WNS++ AQ+
Sbjct: 254 LKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVF 313
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+F++M + +K N ++ +VL A +H G++ G+ + +E S++D+
Sbjct: 314 GLFEEM-GNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDL 372
Query: 335 YCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
+ G++ A QM + S W A++ G +H
Sbjct: 373 LGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIH 408
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 9/196 (4%)
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
+LL+ LR G +H ++K L+ +V ++I++Y K + + F++ +K+
Sbjct: 31 LLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKS 90
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS--HAGLVQEGWHW 413
+W+++I+ + + AL F +M+ GVRP+ + S AC V + H
Sbjct: 91 STTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHC 150
Query: 414 LNT-MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW-GSLLGACRI 471
L G+ ++ G +VD+ + G++ +A L + M + + V W G + G ++
Sbjct: 151 LAVKTGYYCDVFVG----SSLVDMYAKCGEIGDARHLFDEMPER-NVVSWSGMIYGYAQL 205
Query: 472 HKNVDLGEIAAKKLFE 487
V+ + + L E
Sbjct: 206 DDGVEALTLFKQALIE 221
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 1 MKLSKSSSV-SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
M SS V S+++S K +F++ + N+ WNS++ A+ +
Sbjct: 256 MSFDSSSFVGSALISLYSKCGVIEGAYQVFDE-IPTRNLGLWNSMLIACAQHAHTQRVFG 314
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
F M + + P +F + +CS + G++ +G + ++L+D+
Sbjct: 315 LFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLG 374
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+ G+L +A + ++P R V W ++LTG
Sbjct: 375 RAGKLQEAVSVIKQMPMRPTESV-WGALLTG 404
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/617 (37%), Positives = 333/617 (53%), Gaps = 69/617 (11%)
Query: 84 SALHD---LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
S LHD KQ H G + +V + LI M +K + L N
Sbjct: 47 SILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPN 106
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
WT+M+ GY LL ES D V S +++ AC
Sbjct: 107 PFLWTAMIRGYALQG------------LLSESTNFYTRMRRDGVGPVSFTFSALFKACGA 154
Query: 201 VTVNGVTEGAHG-FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ + H ++ GF S++ VGN++ID Y + G + +RKVFD M E+D V+W
Sbjct: 155 ALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTE 214
Query: 260 IIAIYA-------------------------------QNGLAAEALDVFDQMVKSTDVKC 288
+I YA QNG EAL+ F +M + ++
Sbjct: 215 LIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKM-QDVGMET 273
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES--VIVGTSIIDMYCKCGQVDLARK 346
+ VTL+ V+ A A LG ++ I D + S V+VG+++IDMY KCG D A K
Sbjct: 274 DEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYK 333
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F MKE+NV S+++MI GY MH RA AL LF+ M+K +RPN +TF+ +LSACSHAGL
Sbjct: 334 VFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGL 393
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V++G M F + P +HY CMVDLLGRAG L+EA DL++ M ++ + VWG+LL
Sbjct: 394 VEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALL 453
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
GACRIH N D+ +IAA +LF+LEPN G ++LLSNIYA+AGRWE+V + R +++ + K
Sbjct: 454 GACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKK 513
Query: 527 TPGFSLVELR-GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQE 585
PG S E + G++H F GD HP+ +I + L++L +L+ GY ++ S +D+ +
Sbjct: 514 NPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDD 573
Query: 586 EKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDS 627
EKE L HSEKLA N+R+C DCH V+ S++ REI+VRD+
Sbjct: 574 EKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDN 633
Query: 628 KRFHYFKDGLCSCGDYW 644
RFH+F +G CSCG++W
Sbjct: 634 MRFHHFHNGTCSCGNFW 650
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 194/405 (47%), Gaps = 51/405 (12%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V+ N F W ++I A G E+ ++ MR+ + P TF K+C A ++ G
Sbjct: 102 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 161
Query: 93 KQAHQQA-FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR-------------- 137
KQ H Q I GF D++V +++ID+Y KCG L ARK+FDE+ +R
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAK 221
Query: 138 ---------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+++V+WT+M+TGY QN +EAL F++
Sbjct: 222 YGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKM------------QDV 269
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF--DSEVGVGNTLIDAYARGGHVD 240
+ D V +A V+SAC+++ + GF V VG+ LID Y++ G D
Sbjct: 270 GMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPD 329
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+ KVF+ M E++ +++S+I YA +G A AL +F M+K T+++ N VT +L A
Sbjct: 330 EAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLK-TEIRPNKVTFIGILSAC 388
Query: 301 AHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRS 358
+H G++ G+ + ++ K + S ++D+ + G ++ A M E N
Sbjct: 389 SHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGV 448
Query: 359 WTAMIAGYGMHCR---AREALDLFYKMIKAGVRPNYITFVSVLSA 400
W A++ +H A+ A + +K+ G+ NYI ++ ++
Sbjct: 449 WGALLGACRIHGNPDIAQIAANELFKLEPNGIG-NYILLSNIYAS 492
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 149/352 (42%), Gaps = 52/352 (14%)
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK-----V 245
+ S+L C T+ + H +I+ G V LI + VDV V
Sbjct: 45 LMSILHDC---TLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTK---VDVPMGSYPLLV 98
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F + + W ++I YA GL +E+ + + +M + V + T SA+ A
Sbjct: 99 FGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRM-RRDGVGPVSFTFSALFKACGAALN 157
Query: 306 LRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS------ 358
+ LGK +H Q I + + VG S+ID+Y KCG + ARK F++M E++V S
Sbjct: 158 MDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIV 217
Query: 359 -------------------------WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
WTAM+ GY + R +EAL+ F KM G+ + +T
Sbjct: 218 AYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVT 277
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG--VEHYGCMVDLLGRAGKLKEAYDLIE 451
V+SAC+ G V+ +W+ + P V ++D+ + G EAY + E
Sbjct: 278 LAGVISACAQLGAVKHA-NWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFE 336
Query: 452 GMKVKADFVVWGSLLGAC---RIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
MK + F +LG R H + L K E+ PN + +LS
Sbjct: 337 VMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKT--EIRPNKVTFIGILS 386
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/631 (36%), Positives = 358/631 (56%), Gaps = 36/631 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + ++ +WNS+IA + S EA+ + M ++ P T K+ S L
Sbjct: 107 MPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEA 166
Query: 93 KQAHQQAFIFGFH-RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
+++H A I G +VFV SAL+DMY K G+ +A+ + D + ++ ++V T+++ GY
Sbjct: 167 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK--DVVLITALIVGY 224
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
Q EA+ F+ L+E+ V + ASVL +C + G + H
Sbjct: 225 SQKGEDTEAVKAFQSMLVEK------------VQPNEYTYASVLISCGNLKDIGNGKLIH 272
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
G ++K GF+S + +L+ Y R VD S VF + + VTW S+I+ QNG
Sbjct: 273 GLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREE 332
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
AL F +M++ + VK N+ TLS+ L ++L + G+ +H V K + G+ +
Sbjct: 333 TALIEFRKMMRDS-VKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGL 391
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
I++Y KCG D+AR F+ + E +V S MI Y + REAL+LF +MI G++PN
Sbjct: 392 IELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPND 451
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+T +SVL AC+++GLV+EG ++ + I +HY CMVD+LGRAG+L+EA LI
Sbjct: 452 VTVLSVLLACNNSGLVEEGCELFDSFRKD-KIMLTNDHYACMVDMLGRAGRLEEAEMLIT 510
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
+ D V+W +LL AC++H+ V++ E +K+ E+ P + G +LLSN+YA+ G+W+
Sbjct: 511 EV-TNPDLVLWRTLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKR 569
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK-EHPQHEKIYEYLEELNVKLQEVG 570
V +S MK +L K P S VE+ + H F+ GD HP E+I E LEEL K +++G
Sbjct: 570 VIEMKSKMKEMKLKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLG 629
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------NLRVCGDCHTVIRL 613
YV D + V D+++ KE +L HSEKLA NLRVC DCH+ I++
Sbjct: 630 YVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGSIRILKNLRVCVDCHSWIKI 689
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+S+++ REI+ RDSKRFH+F+DG CSCGDYW
Sbjct: 690 VSRIIKREIICRDSKRFHHFRDGSCSCGDYW 720
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 179/344 (52%), Gaps = 18/344 (5%)
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
SLT T TF ++ C + K Q GF ++ S L+D KCGE+ A
Sbjct: 43 SLTTTH-TFSQLLRQCIDERSISGIKNIQAQMLKSGFPVEL-SGSKLVDASLKCGEIGYA 100
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R+LFD +P+ R+IV+W S++ Y+++ ++EA+ +++ + S+NV D
Sbjct: 101 RQLFDGMPE--RHIVTWNSIIAYYIKHRRSKEAVEMYRLMI------------SNNVLPD 146
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD-SEVGVGNTLIDAYARGGHVDVSRKVF 246
++SV A S +++ + +HG + G + S V VG+ L+D Y + G ++ V
Sbjct: 147 EYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVL 206
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D + EKD V ++I Y+Q G EA+ F M+ V+ N T ++VL++ +L +
Sbjct: 207 DRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML-VEKVQPNEYTYASVLISCGNLKDI 265
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
GK IH ++K E ++ TS++ MY +C VD + F +K N +WT++I+G
Sbjct: 266 GNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGL 325
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
+ R AL F KM++ V+PN T S L CS+ + +EG
Sbjct: 326 VQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEG 369
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 22/241 (9%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ L K + N +W S+I+ L + G AL F M + S+ P T A++ CS
Sbjct: 303 SLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSN 362
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L G+Q H +GF RD + S LI++Y KCG AR +FD + + +++S
Sbjct: 363 LAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSE--VDVISLN 420
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M+ Y QN REAL LF+ + + + + V + SVL AC+ +
Sbjct: 421 TMIYSYAQNGFGREALELFERMI------------NLGLQPNDVTVLSVLLACNNSGL-- 466
Query: 206 VTEGAHGFVIKRGFDSEVGVGN----TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSII 261
V EG F R ++ + N ++D R G ++ + + + D V W +++
Sbjct: 467 VEEGCELFDSFR--KDKIMLTNDHYACMVDMLGRAGRLEEAEMLITEVTNPDLVLWRTLL 524
Query: 262 A 262
+
Sbjct: 525 S 525
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 96/191 (50%), Gaps = 15/191 (7%)
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G+ ++D KCG++ AR+ F+ M E+++ +W ++IA Y H R++EA++++ MI V
Sbjct: 84 GSKLVDASLKCGEIGYARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNV 143
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY-----GCMVDLLGRAGK 442
P+ T SV A S L +E H + G+E +VD+ + GK
Sbjct: 144 LPDEYTLSSVFKAFSDLSLEKEAQR-----SHGLAVILGLEVSNVFVGSALVDMYVKFGK 198
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE-LEPNNCGYHVLLSN 501
+EA +++ ++ K ++ ++G + ++ + + L E ++PN Y ++
Sbjct: 199 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTY----AS 254
Query: 502 IYANAGRWEDV 512
+ + G +D+
Sbjct: 255 VLISCGNLKDI 265
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/627 (35%), Positives = 345/627 (55%), Gaps = 34/627 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ W +++ G ++L+ S MR P TF A+K+ L K H
Sbjct: 211 DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVH 270
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Q + D V L+ +Y++ G++SDA K+F+E+P+ ++V W+ M+ + QN
Sbjct: 271 GQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN--DVVPWSFMIARFCQNGF 328
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EA+ LF + E+ V + ++S+L+ C+ +G+ E HG V+K
Sbjct: 329 CNEAVDLF--IRMREAF----------VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
GFD ++ V N LID YA+ +D + K+F + K+ V+WN++I Y G +A +
Sbjct: 377 VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSM 436
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F + +++ V VT S+ L A A L + LG +H IK + + V V S+IDMY
Sbjct: 437 FREALRN-QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYA 495
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG + A+ FN+M+ +V SW A+I+GY H R+AL + M +PN +TF+
Sbjct: 496 KCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLG 555
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VLS CS+AGL+ +G +M + IEP +EHY CMV LLGR+G+L +A LIEG+ +
Sbjct: 556 VLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYE 615
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
++W ++L A N + +A+++ ++ P + +VL+SN+YA A +W +V R
Sbjct: 616 PSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIR 675
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
MK + K PG S +E +G VH F VG +HP + I LE LN+K GYV D
Sbjct: 676 KSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRN 735
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA-------------------NLRVCGDCHTVIRLISKV 617
+V+ D+D EEK+ L +HSE+LA NLR+C DCH+ +++IS +
Sbjct: 736 AVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSI 795
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
V R++V+RD RFH+F G+CSCGD+W
Sbjct: 796 VQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 172/345 (49%), Gaps = 28/345 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP-----CAIKS 82
+FN+ + KN+V W+ +IA + G EA+ F MR+ + P T CAI
Sbjct: 304 VFNE-MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
CS L G+Q H GF D++VS+ALID+Y+KC ++ A KLF E+ +N V
Sbjct: 363 CSGL-----GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSS--KNEV 415
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
SW +++ GY +A +F+E L + V V V +S L AC+ +
Sbjct: 416 SWNTVIVGYENLGEGGKAFSMFREAL------------RNQVSVTEVTFSSALGACASLA 463
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ HG IK +V V N+LID YA+ G + ++ VF+ M D +WN++I+
Sbjct: 464 SMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALIS 523
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK-CIHDQVIKMDL 321
Y+ +GL +AL + D M K D K N +T VL ++ G++ G+ C + +
Sbjct: 524 GYSTHGLGRQALRILDIM-KDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGI 582
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAG 365
E + T ++ + + GQ+D A K + E +V W AM++
Sbjct: 583 EPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 181/390 (46%), Gaps = 27/390 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++ C +D S K H G D+F ++ L++ Y K G DA LFDE+P+R
Sbjct: 56 LRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER-- 113
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N VS+ ++ GY D L +E E + +VF + + L
Sbjct: 114 NNVSFVTLAQGYACQDPIGLYSRLHRE----------GHELNPHVFTSFLKLFVSLDKAE 163
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ H ++K G+DS VG LI+AY+ G VD +R VF+G++ KD V W
Sbjct: 164 ------ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAG 217
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
I++ Y +NG ++L + M + N T L A LG K +H Q++K
Sbjct: 218 IVSCYVENGYFEDSLKLLSCM-RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
VG ++ +Y + G + A K FN+M + +V W+ MIA + + EA+DLF
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 380 YKMIKAGVRPNYITFVSVLSACS---HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDL 436
+M +A V PN T S+L+ C+ +GL ++ + +G + +I ++D+
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS----NALIDV 392
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ K+ A L + K + V W +++
Sbjct: 393 YAKCEKMDTAVKLFAELSSKNE-VSWNTVI 421
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 135/293 (46%), Gaps = 13/293 (4%)
Query: 179 ENSDNVF--VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
E+SD++ +DS A ++L C + + H ++K+G ++ N L++AY +
Sbjct: 38 ESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKA 97
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G + +FD M E++ V++ ++ YA + + ++ ++ + + N ++
Sbjct: 98 GFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGH-ELNPHVFTSF 152
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L L + +H ++K+ + + VG ++I+ Y CG VD AR F + K++
Sbjct: 153 LKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDI 212
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ--EGWHWL 414
W +++ Y + ++L L M AG PN TF + L A G +G H
Sbjct: 213 VVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHG- 271
Query: 415 NTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+ + ++P V G ++ L + G + +A+ + M K D V W ++
Sbjct: 272 QILKTCYVLDPRV-GVG-LLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIA 321
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/629 (35%), Positives = 347/629 (55%), Gaps = 35/629 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + K ++ W+++I L + G S E+++ F MR P + T + + + +L
Sbjct: 373 KTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQ 432
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G+ H + +GF DV VS+AL+ MY K G + D KL++ + R +++SW + L+G
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDR--DLISWNAYLSG 490
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV-AIASVLSACSRVTVNGVTEG 209
L +F +LEE F+ ++ S+L +CS +
Sbjct: 491 LHDCGMYDRPLTIFYH-MLEEG------------FIPNMYTFISILGSCSCLFDVHYGRQ 537
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
H +IK D V LID YA+ +++ + F+ + +D TW II YAQ
Sbjct: 538 VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQ 597
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
+AL+ F QM + VK N TL+ L + L L G+ +H V K + VG+
Sbjct: 598 GEKALNYFRQM-QQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGS 656
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+++DMY KCG ++ A F + ++ +W +I GY + + +AL F M+ G+ P
Sbjct: 657 ALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISP 716
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ +TF +LSACSH GLV+EG N+M +F I P V+H CMVD+LGR GK E D
Sbjct: 717 DGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDF 776
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I+ M++ + ++W ++LGA ++H N+ LGE AA KLFEL+P ++LLSNI+A GRW
Sbjct: 777 IQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRW 836
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
+DV+R RSLM ++ + K PG S VE G+VH F+ D HPQ ++I+ L+EL+ +L +
Sbjct: 837 DDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASI 896
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
YV V+H+V + EK+ LR HSE+LA NLR+C DCH V+
Sbjct: 897 QYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVM 956
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSC 640
+ IS + ++EIVVRD +RFH+FK+G CSC
Sbjct: 957 KHISSITNQEIVVRDVRRFHHFKNGACSC 985
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 224/445 (50%), Gaps = 26/445 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ +F ++N+V +WN ++ A+ GD L+ F SM +L + T +K C+
Sbjct: 268 SKMFIGMPEQNDV-TWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCAN 326
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+L G+ H G+ + F+ L+DMYSKCG DA +F I + +IV W+
Sbjct: 327 SKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKK--PDIVVWS 384
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+++T Q + E++ LF L ++ + I S+LSA +
Sbjct: 385 ALITCLDQQGQSEESIKLFHLMRLGDT------------LPNQYTICSLLSAATNTGNLQ 432
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H V K GF+++V V N L+ Y + G V K+++ M+++D ++WN+ ++
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
G+ L +F M++ + N T ++L + + L + G+ +H +IK L+++
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIP-NMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNN 551
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V T++IDMY KC ++ A AFN++ +++ +WT +I Y + +AL+ F +M +
Sbjct: 552 FVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQE 611
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTM----GHEFNIEPGVEHYGCMVDLLGRAG 441
GV+PN T LS CS + EG L++M GH ++ G +VD+ + G
Sbjct: 612 GVKPNEFTLAGCLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVG----SALVDMYAKCG 666
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLL 466
++EA L E + ++ D + W +++
Sbjct: 667 CMEEAEALFEAL-IRRDTIAWNTII 690
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 187/369 (50%), Gaps = 21/369 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SW ++I L G + +++ F M+ + P T +K+CS L GKQ H
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
QAF G D+FV SAL+D+Y+KCGE+ A K+F +P+ +N V+W +L GY Q +
Sbjct: 237 AQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPE--QNDVTWNVLLNGYAQRGD 294
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
L LF + + +C + + +VL C+ + H +IK
Sbjct: 295 VTGVLKLFCSMMELDVKC------------NEFTLTTVLKGCANSKNLKQGQVIHSLIIK 342
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G++ +G L+D Y++ G + VF + + D V W+++I Q G + E++ +
Sbjct: 343 CGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKL 402
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F +++ D N T+ ++L A + G L+ G+ IH V K E V V +++ MY
Sbjct: 403 F-HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYM 461
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGY---GMHCRAREALDLFYKMIKAGVRPNYIT 393
K G V K + M ++++ SW A ++G GM+ R L +FY M++ G PN T
Sbjct: 462 KNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDR---PLTIFYHMLEEGFIPNMYT 518
Query: 394 FVSVLSACS 402
F+S+L +CS
Sbjct: 519 FISILGSCS 527
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 194/391 (49%), Gaps = 17/391 (4%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
+ ++ C++ L K H + D + +L+++Y+KC + AR + ++P
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
R ++VSWT+++ G V A +++ LF+E ++ + + +A+ L
Sbjct: 175 DR--DVVSWTALIQGLVAEGFANDSIYLFQEM------------QNEGIMPNEFTLATGL 220
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
ACS + + H K G ++ VG+ L+D YA+ G ++++ K+F GM E++ V
Sbjct: 221 KACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDV 280
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
TWN ++ YAQ G L +F M++ DVKCN TL+ VL A+ L+ G+ IH
Sbjct: 281 TWNVLLNGYAQRGDVTGVLKLFCSMME-LDVKCNEFTLTTVLKGCANSKNLKQGQVIHSL 339
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+IK E + +G ++DMY KCG A F +K+ ++ W+A+I ++ E+
Sbjct: 340 IIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEES 399
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
+ LF+ M PN T S+LSA ++ G +Q G ++ ++ E V +V
Sbjct: 400 IKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYG-QSIHACVWKYGFETDVAVSNALVT 458
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ + G + + L E M V D + W + L
Sbjct: 459 MYMKNGCVHDGTKLYESM-VDRDLISWNAYL 488
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/617 (37%), Positives = 333/617 (53%), Gaps = 69/617 (11%)
Query: 84 SALHD---LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
S LHD KQ H G + +V + LI M +K + L N
Sbjct: 47 SILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPN 106
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
WT+M+ GY LL ES D V S +++ AC
Sbjct: 107 PFLWTAMIRGYALQG------------LLSESTNFYTRMRRDGVGPVSFTFSALFKACGA 154
Query: 201 VTVNGVTEGAHG-FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ + H ++ GF S++ VGN++ID Y + G + +RKVFD M E+D V+W
Sbjct: 155 ALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTE 214
Query: 260 IIAIYA-------------------------------QNGLAAEALDVFDQMVKSTDVKC 288
+I YA QNG EAL+ F +M + ++
Sbjct: 215 LIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKM-QDVGMET 273
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES--VIVGTSIIDMYCKCGQVDLARK 346
+ VTL+ V+ A A LG ++ I D + S V+VG+++IDMY KCG D A K
Sbjct: 274 DEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYK 333
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F MKE+NV S+++MI GY MH RA AL LF+ M+K +RPN +TF+ +LSACSHAGL
Sbjct: 334 VFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGL 393
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V++G M F + P +HY CMVDLLGRAG L+EA DL++ M ++ + VWG+LL
Sbjct: 394 VEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALL 453
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
GACRIH N D+ +IAA +LF+LEPN G ++LLSNIYA+AGRWE+V + R +++ + K
Sbjct: 454 GACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKK 513
Query: 527 TPGFSLVELR-GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQE 585
PG S E + G++H F GD HP+ +I + L++L +L+ GY ++ S +D+ +
Sbjct: 514 NPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDD 573
Query: 586 EKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDS 627
EKE L HSEKLA N+R+C DCH V+ S++ REI+VRD+
Sbjct: 574 EKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDN 633
Query: 628 KRFHYFKDGLCSCGDYW 644
RFH+F +G CSCG++W
Sbjct: 634 MRFHHFHNGTCSCGNFW 650
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 195/405 (48%), Gaps = 51/405 (12%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V+ N F W ++I A G E+ ++ MR+ + P TF K+C A ++ G
Sbjct: 102 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 161
Query: 93 KQAHQQA-FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR-------------- 137
KQ H Q I GF D++V +++ID+Y KCG L ARK+FDE+ +R
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAK 221
Query: 138 ---------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
++++V+WT+M+TGY QN +EAL F++
Sbjct: 222 YGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKM------------QDV 269
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF--DSEVGVGNTLIDAYARGGHVD 240
+ D V +A V+SAC+++ + GF V VG+ LID Y++ G D
Sbjct: 270 GMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPD 329
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+ KVF+ M E++ +++S+I YA +G A AL +F M+K T+++ N VT +L A
Sbjct: 330 EAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLK-TEIRPNKVTFIGILSAC 388
Query: 301 AHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRS 358
+H G++ G+ + ++ K + S ++D+ + G ++ A M E N
Sbjct: 389 SHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGV 448
Query: 359 WTAMIAGYGMHCR---AREALDLFYKMIKAGVRPNYITFVSVLSA 400
W A++ +H A+ A + +K+ G+ NYI ++ ++
Sbjct: 449 WGALLGACRIHGNPDIAQIAANELFKLEPNGIG-NYILLSNIYAS 492
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 149/352 (42%), Gaps = 52/352 (14%)
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK-----V 245
+ S+L C T+ + H +I+ G V LI + VDV V
Sbjct: 45 LMSILHDC---TLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTK---VDVPMGSYPLLV 98
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F + + W ++I YA GL +E+ + + +M + V + T SA+ A
Sbjct: 99 FGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRM-RRDGVGPVSFTFSALFKACGAALN 157
Query: 306 LRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS------ 358
+ LGK +H Q I + + VG S+ID+Y KCG + ARK F++M E++V S
Sbjct: 158 MDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIV 217
Query: 359 -------------------------WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
WTAM+ GY + R +EAL+ F KM G+ + +T
Sbjct: 218 AYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVT 277
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG--VEHYGCMVDLLGRAGKLKEAYDLIE 451
V+SAC+ G V+ +W+ + P V ++D+ + G EAY + E
Sbjct: 278 LAGVISACAQLGAVKHA-NWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFE 336
Query: 452 GMKVKADFVVWGSLLGAC---RIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
MK + F +LG R H + L K E+ PN + +LS
Sbjct: 337 VMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKT--EIRPNKVTFIGILS 386
>gi|242054799|ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
gi|241928520|gb|EES01665.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
Length = 640
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/648 (36%), Positives = 363/648 (56%), Gaps = 57/648 (8%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG- 92
D N+ W++ + L R G E+L A S P P ++ SC+AL L SG
Sbjct: 13 DANSTEPWSARVRTLTRLGRHRESL-ALLRHGDPSPPPHALALPASVISCAAL-SLPSGV 70
Query: 93 KQAHQQAFIFGF--HRDVFVSSALIDMYSKCGELSDARKLFDEIP------QRIRNIVSW 144
Q H A G D ++ SAL+ YS+ G L A +L DE+P +R ++
Sbjct: 71 AQIHALAAKRGLLPAADAYLLSALLTSYSRLGCLPLAHQLLDEMPLESTPHTTLRT--AF 128
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
S+++G + + LF+ + V D+V + +++ A T
Sbjct: 129 NSVISGCALHALPVASFALFRRM------------RAAAVGFDAVTLLALVPA----TPL 172
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH--VDVSRKVFDGM--IEKDAVTWNSI 260
V H + G +E V N L+ YARGG ++R+VFD M +D V+WN++
Sbjct: 173 SVVPQVHALAARVGLATETSVANCLMSTYARGGAFGAALARRVFDEMPLASRDLVSWNAV 232
Query: 261 IAIYAQNGLAAEALDVFDQM--VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
++ +AQNGLA +AL+++ +M + + V+ +AVT+ VL + AHLG +G + V +
Sbjct: 233 LSAHAQNGLAVDALELYRRMRSPEGSGVEPDAVTIVGVLSSAAHLGARGVGFDVEHYVRQ 292
Query: 319 --MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
+V + ++I+ + +CG + A++ F++M K++ SWTA+I G+GMH A+
Sbjct: 293 RIPGFHTNVQLCNALINFHARCGSLPRAQQLFDEMPRKSIVSWTALITGHGMHGNGDVAV 352
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDL 436
LF +M+ G+RP+ + V++ SACSHAGL EG + + M + + P +EHY CMVDL
Sbjct: 353 SLFERMVSEGIRPDNVAMVALFSACSHAGLYDEGRRYFSAMESVYKLRPTLEHYTCMVDL 412
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYH 496
LGRAG+L+EA +LI M + AD VWG+LLGAC+IHKNVD+GE A ++ ELEP N GY+
Sbjct: 413 LGRAGRLEEARELISSMPMPADGAVWGALLGACKIHKNVDVGEEAFTRVIELEPKNVGYY 472
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
VL+SNIY + G+ + V R R++M+ R L K PG S VE +G+VH F+ D HPQ +IY
Sbjct: 473 VLMSNIYTDTGQLDCVARVRAMMRERGLKKEPGCSYVEHKGRVHLFMADDHSHPQARRIY 532
Query: 557 EYLEELNVKLQEVGYV--TDMTSVIHDVDQEEKEMTLRIHSEKLA--------------- 599
E + L + ++E + +++ + +++ + + IHSEKLA
Sbjct: 533 ELVIRLELMVKEKSGMRESEVAAAKGRMEKAAAQPLVGIHSEKLAVAFGLLNTEAGSEIV 592
Query: 600 ---NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH+ ++++S +R +VRD+ RFH F G+CSC DYW
Sbjct: 593 VIKNLRVCGDCHSFLKVVSATTNRAFLVRDASRFHRFDGGVCSCKDYW 640
>gi|414879943|tpg|DAA57074.1| TPA: hypothetical protein ZEAMMB73_804341 [Zea mays]
Length = 1056
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/647 (36%), Positives = 356/647 (55%), Gaps = 55/647 (8%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D N+ SW++ + L R G E++ A S P P ++ SC+AL
Sbjct: 429 DANSTESWSARVRTLTRLGRHKESI-ALLRHGGPSPPPHALALPASVISCAALSLPTGVA 487
Query: 94 QAHQQAFIFGF--HRDVFVSSALIDMYSKCGELSDARKLFDEIP------QRIRNIVSWT 145
Q H A G D ++ SAL+ YS+ G L A +L DE P +R ++
Sbjct: 488 QIHALAAKRGLLPAADAYLLSALLTAYSRLGCLRLAHQLLDETPIESTSHTTLRT--AFN 545
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
S+++G ++ LF+ + V D+V + +++ A V
Sbjct: 546 SLISGCARHSLPVACFALFRRM------------RAIAVRFDAVTLLALVPAAPLSVVPQ 593
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH--VDVSRKVFDGM--IEKDAVTWNSII 261
V H + G +E V N L+ YARGG ++R+VFD M +D V+WN+++
Sbjct: 594 V----HALAAQVGLATETSVANCLMSTYARGGAFGAALARRVFDEMPLASRDLVSWNAVL 649
Query: 262 AIYAQNGLAAEALDVFDQM--VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK- 318
+ +AQNGLA +ALD++ +M + + V+ +AVT+ VL + AHLG +G V++
Sbjct: 650 SAHAQNGLAVDALDLYRRMRSPEGSGVEPDAVTIVGVLSSAAHLGARGVGFDAEHYVVQR 709
Query: 319 -MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+V + ++I+ + +CG + A++ F++M K++ SWTA+I G+GMH A+
Sbjct: 710 LPGFRTNVQLCNALINFHARCGSLPRAQQLFDEMPAKSIVSWTALITGHGMHGNGGVAVS 769
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
LF +M+ G+ P+ + V VLSACSHAGL EG + +TM + + P +EHY C+VDLL
Sbjct: 770 LFERMVSEGIHPDNVAMVGVLSACSHAGLYDEGRMYFSTMESVYKLRPTLEHYTCIVDLL 829
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GRAG+L+EA +LI M + AD VWG+LLGAC+IHKNV++GE A ++ ELEP N GY+V
Sbjct: 830 GRAGRLEEARELISSMPMPADGAVWGALLGACKIHKNVEIGEEAFARVVELEPRNVGYYV 889
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
L+SNIY + G+ + V R R++M+ R L K PG S VE G+VH F+ D HPQ +IYE
Sbjct: 890 LMSNIYTDTGQLDCVARVRAVMRKRGLKKEPGCSYVEHNGRVHLFMADDHSHPQARRIYE 949
Query: 558 YLEELNVKLQEVGYVTDMTSVIHD--VDQEEKEMTLRIHSEKLA---------------- 599
+ L + ++E V + + +++E + + HSEKLA
Sbjct: 950 LVTRLELMVKEKSGVRESVVAVPKGRMEKEAAQPLVGFHSEKLAVAFGLLNTEAGSEIVV 1009
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH+ ++ +S +R +VRD+ RFH F G+CSC DYW
Sbjct: 1010 IKNLRVCGDCHSFLKAVSATTNRSFLVRDASRFHRFDGGVCSCKDYW 1056
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/538 (38%), Positives = 329/538 (61%), Gaps = 15/538 (2%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ ++++ +WN +I+ + G +ALR F M+K L P T + + + L+ G
Sbjct: 309 MPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQG 368
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H H DVF+ SAL+D+Y KC ++ A+ +FD + ++V ++M++GYV
Sbjct: 369 KEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDA--TKSIDVVIGSTMISGYV 426
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N + A+ +F+ L + + ++V +AS L AC+ + + + HG
Sbjct: 427 LNRMSEAAVKMFRYLL------------ALGIKPNAVMVASTLPACASMAAMRIGQELHG 474
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+V+K ++ V + L+D Y++ G +D+S +F M KD VTWNS+I+ +AQNG E
Sbjct: 475 YVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEE 534
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
ALD+F QM+ VK N VT+S++L A A L + GK IH +IK + + +++I
Sbjct: 535 ALDLFRQMIME-GVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALI 593
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG ++LA + F M EKN SW ++I+ YG H +E++DL M + G + +++
Sbjct: 594 DMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHV 653
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF++++SAC+HAG VQEG M E++IEP VEH CMVDL RAGKL +A I
Sbjct: 654 TFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIAD 713
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M K D +WG+LL ACR+H+NV+L EIA+++LF+L+P+NCGY+VL+SNI A AGRW+ V
Sbjct: 714 MPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGV 773
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
+ R LMK++++ K PG+S V++ H F+ DK HP E+IY L+ L ++L++ G
Sbjct: 774 SKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIELKQEG 831
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 237/453 (52%), Gaps = 29/453 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+D+ + WN ++ + GD A+ F MR P +T C + C+A DL SG
Sbjct: 208 MDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSG 267
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H A +G +V V++ L+ MY+KC L +A +LF +P+ ++V+W M++G V
Sbjct: 268 VQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPR--DDLVTWNGMISGCV 325
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA-- 210
QN +AL LF + + DSV +AS+L A + +NG +G
Sbjct: 326 QNGLVDDALRLFCDM------------QKSGLQPDSVTLASLLPALTE--LNGFKQGKEI 371
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG++++ +V + + L+D Y + V +++ VFD D V +++I+ Y N ++
Sbjct: 372 HGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMS 431
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
A+ +F ++ + +K NAV +++ L A A + +R+G+ +H V+K E V ++
Sbjct: 432 EAAVKMFRYLL-ALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESA 490
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++DMY KCG++DL+ F++M K+ +W +MI+ + + EALDLF +MI GV+ N
Sbjct: 491 LMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYN 550
Query: 391 YITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
+T S+LSAC+ + G H + G I + ++D+ G+ G L+ A
Sbjct: 551 NVTISSILSACAGLPAIYYGKEIHGIIIKG---PIRADLFAESALIDMYGKCGNLELALR 607
Query: 449 LIEGMKVKADFVVWGSLLGACRIH----KNVDL 477
+ E M K + V W S++ A H ++VDL
Sbjct: 608 VFEHMPEKNE-VSWNSIISAYGAHGLVKESVDL 639
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 219/438 (50%), Gaps = 31/438 (7%)
Query: 39 FSWNSVIADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
WN +I G A+ + M S P T P +KSC+AL LH G+ H
Sbjct: 111 LPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVH 170
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+ G RD++V SALI MY+ G L AR++FD + + R+ V W M+ GYV+ +
Sbjct: 171 RTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDE--RDCVLWNVMMDGYVKAGD 228
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT--VNGVTEGAHGFV 214
A+ LF+ ++ S C D F +A LS C+ ++GV H
Sbjct: 229 VASAVGLFR--VMRASGC-------DPNF---ATLACFLSVCAAEADLLSGVQ--LHTLA 274
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+K G + EV V NTL+ YA+ ++ + ++F M D VTWN +I+ QNGL +AL
Sbjct: 275 VKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDAL 334
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+F M KS ++ ++VTL+++L A+ L + GK IH +++ V + ++++D+
Sbjct: 335 RLFCDMQKS-GLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDI 393
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y KC V +A+ F+ K +V + MI+GY ++ + A+ +F ++ G++PN +
Sbjct: 394 YFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMV 453
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLI 450
S L AC+ ++ G H + ++ E ++D+ + G+L ++ +
Sbjct: 454 ASTLPACASMAAMRIGQEL-----HGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMF 508
Query: 451 EGMKVKADFVVWGSLLGA 468
M K D V W S++ +
Sbjct: 509 SKMSAK-DEVTWNSMISS 525
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 3/223 (1%)
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQM-VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
+ WN +I + G A+ + +M + + + TL V+ + A LG L LG+ +H
Sbjct: 111 LPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVH 170
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+ L+ + VG+++I MY G +D AR+ F+ M E++ W M+ GY
Sbjct: 171 RTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVA 230
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
A+ LF M +G PN+ T LS C+ + G L+T+ ++ +EP V +
Sbjct: 231 SAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQ-LHTLAVKYGLEPEVAVANTL 289
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
V + + L+EA+ L G+ + D V W ++ C + VD
Sbjct: 290 VSMYAKCQCLEEAWRLF-GLMPRDDLVTWNGMISGCVQNGLVD 331
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 15/162 (9%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
N L +++ + N SWNS+I+ G E++ M++ TF I
Sbjct: 601 NLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALIS 660
Query: 82 SCSALHDLHSGKQAHQQAFIF-----GFHRDVFVS--SALIDMYSKCGELSDARKLFDEI 134
+C+ H+G Q + +F +H + V S ++D+YS+ G+L A + ++
Sbjct: 661 ACA-----HAG-QVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADM 714
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKE-FLLEESECG 175
P + + W ++L + N A + +E F L+ CG
Sbjct: 715 PFKPDAGI-WGALLHACRVHRNVELAEIASQELFKLDPHNCG 755
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/476 (42%), Positives = 297/476 (62%), Gaps = 21/476 (4%)
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D VL AC+R+ H + K GFDS+V V N LI Y G +D + KVF
Sbjct: 86 DHFTFPFVLKACARLQTG---LDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVF 142
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ M E+D V+W+S+IA +A+NG EAL +F +M VK + V + +V+ AI+ LG L
Sbjct: 143 EEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDL 202
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
LGK I + + LE +V +GT+++DM+ +CG ++ + + F++M E+NV +WTA+I G
Sbjct: 203 ELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGL 262
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+H R+ EAL +FY+M G +P+++TF VL ACSH GLV EGWH ++ +E+ +EP
Sbjct: 263 AVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPL 322
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
EHYGCMVDLLGRAG L EA ++GM ++ + ++W +LLGAC H ++L E +K+
Sbjct: 323 PEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKIN 382
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
EL+ + G +VLLSN+Y GRW + R+ M+ +R++K PG SL+ + +H F+ GD
Sbjct: 383 ELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGD 442
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
HPQ E I E+L + L+ VGY D+++V+ D+++EEKE TL HSEKLA
Sbjct: 443 NNHPQFESIREFLVSMIDSLKVVGYTPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLC 502
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH ++ S V +REI++RD RFH+F G CSC DYW
Sbjct: 503 FKDSRTIRVMKNLRICHDCHCFMKYASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 134/246 (54%), Gaps = 17/246 (6%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M ++P TFP +K+C+ L +G H F GF DV+V + LI Y CG
Sbjct: 78 MAMAGVSPDHFTFPFVLKACARLQ---TGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGF 134
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L A K+F+E+P+ R++VSW+SM+ + +N EAL LF+ L
Sbjct: 135 LDFALKVFEEMPE--RDLVSWSSMIACFAKNGFGYEALALFQRMQL-----------VGT 181
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V D V + SV+SA S + + + GF+ + G + V +G L+D ++R G ++ S
Sbjct: 182 VKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESM 241
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+VFD M E++ +TW ++I A +G +AEAL +F +M ++ + + VT + VL+A +H
Sbjct: 242 RVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEM-RNHGFQPDHVTFTGVLVACSHG 300
Query: 304 GVLRLG 309
G++ G
Sbjct: 301 GLVSEG 306
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 113/235 (48%), Gaps = 21/235 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-SLTPTRSTFPCAIKSCSALHDLHS 91
+ + ++ SW+S+IA A+ G EAL F M+ + ++ P + + S L DL
Sbjct: 145 MPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLEL 204
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
GK G V + +AL+DM+S+CG + ++ ++FDE+ + RN+++WT+++ G
Sbjct: 205 GKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGE--RNVLTWTALINGL 262
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+ + EAL +F E + D V VL ACS + V+EG H
Sbjct: 263 AVHGRSAEALRMFYEM------------RNHGFQPDHVTFTGVLVACSHGGL--VSEGWH 308
Query: 212 GFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
F R G + ++D R G ++ + K DGM I +++ W +++
Sbjct: 309 VFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLG 363
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 14/128 (10%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ NV +W ++I LA G S EALR F MR P TF + +CS G
Sbjct: 249 ERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACS------HGGL 302
Query: 95 AHQQAFIFGFHRDVFVSSAL-------IDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ +F R+ + L +D+ + G L++A K D +P R +I+ W ++
Sbjct: 303 VSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSII-WRTL 361
Query: 148 LTGYVQND 155
L V ++
Sbjct: 362 LGACVNHN 369
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 242/628 (38%), Positives = 358/628 (57%), Gaps = 39/628 (6%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SWN++I+ L + G A+ + MR+ ++P+ + SC++L L +G+Q H A
Sbjct: 443 SWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDA 502
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR- 158
+G D VS+AL+ MY CG S++ ++F+ + + +IVSW S++ V +
Sbjct: 503 VKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEH--DIVSWNSIMGVMVSSHAPTA 560
Query: 159 EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG 218
E++ +F + G + N V ++LSA S ++V + + H V+K G
Sbjct: 561 ESVEVFSNMMRS-----GLTPNK-------VTFVNLLSALSPLSVLELGKQVHAVVLKHG 608
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQNGLAAEALDVF 277
+ V N L+ YA+ G +D ++F M +DAV+WNS+I+ Y NG E +D
Sbjct: 609 AIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCV 668
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
M+ S + + T S VL A A + L G +H I+ LE V+V ++++DMY K
Sbjct: 669 WLMMHSNQM-LDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSK 727
Query: 338 CGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSV 397
CG++D A K FN M +KN SW +MI+GY H +AL++F +M + G P+++TFVSV
Sbjct: 728 CGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSV 787
Query: 398 LSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
LSACSHAGLV G + M + I P +EHY C++DLLGRAGKL + + I M +K
Sbjct: 788 LSACSHAGLVDRGLDYFEMM-EDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKP 846
Query: 458 DFVVWGSLLGACRIHKN---VDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
+ ++W ++L ACR K+ +DLG+ A++ L ELEP N +VL SN YA GRWED +
Sbjct: 847 NTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAK 906
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTD 574
R+ M + K G S V L VH F+ GD+ HP ++IYE L L K++ GYV
Sbjct: 907 ARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKNAGYVPM 966
Query: 575 MTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISK 616
++D+++E KE L HSEKLA NLRVCGDCHT R IS+
Sbjct: 967 TEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDVPIRIMKNLRVCGDCHTAFRYISQ 1026
Query: 617 VVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+V R+I++RDS RFH+F+DG CSCGDYW
Sbjct: 1027 IVCRQIILRDSIRFHHFEDGKCSCGDYW 1054
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 223/454 (49%), Gaps = 30/454 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM----RKLSLTPTRSTFPCAIKSC 83
+F+ +++N V SW +++ G + EA R F +M + S PT TF +++C
Sbjct: 113 VFDGMLERNAV-SWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFS-RPTPFTFGSVLRAC 170
Query: 84 S-ALHDLHS-GKQAHQQAFIFGFHRDVFVSSALIDMYSKC--GELSDARKLFDEIPQRIR 139
A DL + Q H + + V +ALI MY C G A+++FD P +R
Sbjct: 171 QDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTP--VR 228
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++++W ++++ Y + LF L ++S +++ F S+ A+ LS+CS
Sbjct: 229 DLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAI--ELRPNEHTF-GSLITATSLSSCS 285
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+GV + V+K G S++ VG+ L+ A+AR G +D ++ +F + E++AVT N
Sbjct: 286 ----SGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNG 341
Query: 260 IIAIYAQNGLAAEALDVF----DQMVKSTDVKCNAVTLSAVL-LAIAHLGVLRLGKCIHD 314
+I + + EA+ +F D V +TD V LSAV +I G++R G+ +H
Sbjct: 342 LIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTF--VVLLSAVAEFSIPEDGLMR-GREVHG 398
Query: 315 QVIKMDL-EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+++ L + + + +++MY KCG +D A + F + ++ SW +I+ +
Sbjct: 399 HILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCE 458
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
A+ + M + + P+ +S LS+C+ L+ G ++ ++ ++ +
Sbjct: 459 GAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAG-QQVHCDAVKWGLDLDTSVSNAL 517
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
V + G G E++++ M + D V W S++G
Sbjct: 518 VKMYGDCGARSESWEIFNSM-AEHDIVSWNSIMG 550
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 171/365 (46%), Gaps = 49/365 (13%)
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQA-----HQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
P+RS P + + L G++A H + G D+F+S+ L+++Y+K L
Sbjct: 50 PPSRS--PPPVHPHAGLLLPRRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRL 107
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
+ AR++FD + + RN VSWT +++GYV + EA +FK L E SE +
Sbjct: 108 AAARQVFDGMLE--RNAVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTP----- 160
Query: 185 FVDSVAIASVLSACSRVTVN--GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG--GHVD 240
SVL AC + HG V K + S V N LI Y G
Sbjct: 161 ----FTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPL 216
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV---KSTDVKCNAVTLSAVL 297
+++VFD +D +TWN+++++YA+ G +F M+ + +++ N T +++
Sbjct: 217 QAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLI 276
Query: 298 LAIAHLGVLRLGKC-------IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
A + L C + +V+K + VG++++ + + G +D A+ F
Sbjct: 277 TATS------LSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFIN 330
Query: 351 MKEKNVRSWTAMIAGY-GMHCRAREALDLFYKMIKAGVRPNYI----TFVSVLSACSHAG 405
+KE+N + +I G HC + EA+ +F G R +++ TFV +LSA +
Sbjct: 331 LKERNAVTLNGLIVGLVKQHC-SEEAVGIFM-----GTRDSFVVNTDTFVVLLSAVAEFS 384
Query: 406 LVQEG 410
+ ++G
Sbjct: 385 IPEDG 389
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 133/283 (46%), Gaps = 20/283 (7%)
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
E H ++KRG ++ + N L++ YA+G + +R+VFDGM+E++AV+W +++ Y
Sbjct: 73 AAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGY 132
Query: 265 AQNGLAAEALDVFDQMV--KSTDVKCNAVTLSAVLLAIAHLG--VLRLGKCIHDQVIKMD 320
+G+ EA VF M+ S + T +VL A G +L +H V K
Sbjct: 133 VLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTI 192
Query: 321 LEESVIVGTSIIDMY--CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
+ V ++I MY C G A++ F+ +++ +W A+++ Y L
Sbjct: 193 YASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTL 252
Query: 379 FYKMI----KAGVRPNYITFVSV-----LSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
F M+ +RPN TF S+ LS+CS +G++ + + + G ++ G
Sbjct: 253 FMAMLHDDSAIELRPNEHTFGSLITATSLSSCS-SGVLDQVFARVLKSGSSSDLYVG--- 308
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+V R G L EA D+ +K + + G ++G + H
Sbjct: 309 -SALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQH 350
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 88/193 (45%), Gaps = 25/193 (12%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ + + SWNS+I+ G E + M + TF + +C+++
Sbjct: 635 LFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVA 694
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G + H DV V SAL+DMYSKCG + A K+F+ + Q +N SW SM
Sbjct: 695 ALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQ--KNEFSWNSM 752
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY ++ +AL +F EE + GA D V SVLSACS
Sbjct: 753 ISGYARHGLGEKALEIF-----EEMQRNGACP-------DHVTFVSVLSACS-------- 792
Query: 208 EGAHGFVIKRGFD 220
H ++ RG D
Sbjct: 793 ---HAGLVDRGLD 802
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ +FN KN FSWNS+I+ AR G +AL F M++ P TF + +CS
Sbjct: 735 SKVFNSMSQKNE-FSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSH 793
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ G + G + S +ID+ + G+L ++ + +P + N + W
Sbjct: 794 AGLVDRGLDYFEMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMK-PNTLIWR 852
Query: 146 SMLTGYVQNDNA 157
++L Q+ +
Sbjct: 853 TVLVACRQSKDG 864
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/627 (37%), Positives = 364/627 (58%), Gaps = 40/627 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F ++K++V SWNS+I L + G +EA+ + SMR+ + P T ++ SC++L
Sbjct: 91 VFCFMMEKDSV-SWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLK 149
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+Q H ++ G +V VS+AL+ +Y++ G L++ RK+F +P+ + VSW S+
Sbjct: 150 WAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH--DQVSWNSI 207
Query: 148 LTGYVQNDNA-REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+ ++ + EA+ F L + ++ + +SVLSA S ++ +
Sbjct: 208 IGALASSERSLPEAVACFLNALRAGQK------------LNRITFSSVLSAVSSLSFGEL 255
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK-DAVTWNSIIAIYA 265
+ HG +K E N LI Y + G +D K+F M E+ D VTWNS+I+ Y
Sbjct: 256 GKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYI 315
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
N L A+ALD+ M++ T + ++ + VL A A + L G +H ++ LE V
Sbjct: 316 HNELLAKALDLVWFMLQ-TGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 374
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM-IK 384
+VG++++DMY KCG++D A + FN M +N SW +MI+GY H + EAL LF M +
Sbjct: 375 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLD 434
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
P+++TFV VLSACSHAGL++EG+ +M + + P +EH+ CM DLLGRAG+L
Sbjct: 435 GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELD 494
Query: 445 EAYDLIEGMKVKADFVVWGSLLGAC-RIH-KNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
+ D I+ M VK + ++W ++LGAC R + + +LG+ AA+ LF+LEP N +VLL N+
Sbjct: 495 KLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNM 554
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
YA GRWED+ + R MK+ + K G+S V ++ VH F+ GDK HP + IY+ L+EL
Sbjct: 555 YAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDTDVIYKKLKEL 614
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------------NLRV 603
N K+++ GYV ++D++QE KE L HSEKLA NLRV
Sbjct: 615 NRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRV 674
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRF 630
CGDCH+ + ISK+ R+I++RDS R+
Sbjct: 675 CGDCHSAFKYISKIEGRQIILRDSNRY 701
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 193/387 (49%), Gaps = 20/387 (5%)
Query: 89 LHSGKQAHQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G++ H G V + + L++MY+KCG ++DAR++F + + ++ VSW SM
Sbjct: 49 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMME--KDSVSWNSM 106
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+TG QN EA+ ++ E + S + S LS+C+ + +
Sbjct: 107 ITGLDQNGCFIEAVERYQSMRRHE------------ILPGSFTLISSLSSCASLKWAKLG 154
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG +K G D V V N L+ YA G+++ RK+F M E D V+WNSII A +
Sbjct: 155 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASS 214
Query: 268 GLA-AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
+ EA+ F +++ K N +T S+VL A++ L LGK IH +K ++ +
Sbjct: 215 ERSLPEAVACFLNALRAGQ-KLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEAT 273
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
++I Y KCG++D K F++M E ++ +W +MI+GY + +ALDL + M++
Sbjct: 274 TENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQT 333
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G R + + +VLSA + ++ G ++ +E V +VD+ + G+L
Sbjct: 334 GQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVVGSALVDMYSKCGRLDY 392
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIH 472
A M V+ + W S++ H
Sbjct: 393 ALRFFNTMPVRNSY-SWNSMISGYARH 418
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/635 (34%), Positives = 353/635 (55%), Gaps = 41/635 (6%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
++ + +++I+ + G E+LR F +M P+ T + +CS L +
Sbjct: 316 TSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFV 375
Query: 96 HQQAF-IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
+QA + RD + + L+ Y++ +L AR FD I + ++VSW +M Y+Q+
Sbjct: 376 LEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAI--QSPDVVSWNAMAAAYLQH 433
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV---TVNGVTEGAH 211
+REAL+LF+ LLE V + L+AC+ T + + +
Sbjct: 434 HRSREALVLFERMLLE------------GVRPSVATFITALTACAAYPPQTASAIGKRIQ 481
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM--IEKDAVTWNSIIAIYAQNGL 269
+ + G + + V N ++ YA+ G + +R VF+ + +D +TWNS++A Y +GL
Sbjct: 482 SLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGL 541
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EA ++F M VK N VT AVL A + G+ IH +V+ E ++
Sbjct: 542 GKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQN 601
Query: 330 SIIDMYCKCGQVDLARKAFNQMK--EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++++MY KCG +D A+ F++ +++V +WT++IAGY + +A AL LF+ M + GV
Sbjct: 602 ALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGV 661
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
RPN++TF+S L+AC+H G +++G L+ M + I P +H+ C+VDLLGR G+L EA
Sbjct: 662 RPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAE 721
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
L+E +AD + W +LL AC+ K ++ GE A+++ +L+P +++L+++YA AG
Sbjct: 722 KLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAG 780
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RW + R M ++ + PG S VE+ ++H+F GDK HP+ E+IY LE L+ ++
Sbjct: 781 RWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIK 840
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV D V+HDV QE KE L HSEKLA NLRVC DCHT
Sbjct: 841 AAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHT 900
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LISKV R+I++RDS R+H+F G CSCGDYW
Sbjct: 901 ATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 219/443 (49%), Gaps = 26/443 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V+S ++I G +A+ F M + P + +CS L +L +G++ H
Sbjct: 108 SVYSCTAMIRAWMEHGRPDKAMELFDRME---VRPNCHALIALVNACSCLGNLAAGRRIH 164
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ-RIRNIVSWTSMLTGYVQND 155
Q F + + +ALI MYSKCG L DA++ FD +P+ R++V+W +M++ +++N
Sbjct: 165 SQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNG 224
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE--GAHGF 213
+AREAL LF++ + G N SV SVL +C + + + HG
Sbjct: 225 SAREALQLFRDMDRD----GAPPPN-------SVTFVSVLDSCVEAGLLSLEDVRAIHGR 273
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF----DGMIEKDAVTWNSIIAIYAQNGL 269
++ G + E V L+D+Y + G +D + +VF D VT +++I+ QNG
Sbjct: 274 IVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGW 333
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVG 328
E+L +F M K + VTL +VL A + L V + +Q ++ + ++G
Sbjct: 334 PQESLRLFFAM-NLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLG 392
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
T+++ Y + + AR F+ ++ +V SW AM A Y H R+REAL LF +M+ GVR
Sbjct: 393 TTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVR 452
Query: 389 PNYITFVSVLSACS--HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
P+ TF++ L+AC+ + ++ E +E +++ + G L +A
Sbjct: 453 PSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADA 512
Query: 447 YDLIEGM-KVKADFVVWGSLLGA 468
+ E + + D + W S+L A
Sbjct: 513 RAVFERISPARRDCITWNSMLAA 535
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 218/456 (47%), Gaps = 47/456 (10%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS-TFPCAIKSC--SALHDLHS 91
K +V +WN++I+ R G + EAL+ F M + P S TF + SC + L L
Sbjct: 207 KRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLED 266
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLF----DEIPQRIRNIVSWTSM 147
+ H + G R+ FV +AL+D Y K G L DA ++F DE P ++V+ ++M
Sbjct: 267 VRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPS--TSLVTCSAM 324
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ QN +E+L LF LE ++ G V + SVL+ACS + V T
Sbjct: 325 ISACWQNGWPQESLRLFFAMNLEGTKPSG------------VTLVSVLNACSMLQVGSAT 372
Query: 208 EGAHGFVIKRGFD-----SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
FV+++ + + +G TL+ YAR + +R FD + D V+WN++ A
Sbjct: 373 ----AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAA 428
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG---VLRLGKCIHDQVIKM 319
Y Q+ + EAL +F++M+ V+ + T L A A +GK I + +
Sbjct: 429 AYLQHHRSREALVLFERMLLE-GVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEA 487
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE--KNVRSWTAMIAGYGMHCRAREALD 377
LE V + ++MY KCG + AR F ++ ++ +W +M+A YG H +EA +
Sbjct: 488 GLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFE 547
Query: 378 LFYKM-IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGC 432
LF M + V+PN +TFV+VL A + + +G H + G E
Sbjct: 548 LFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREI-----HARVVSNGFESDTVIQNA 602
Query: 433 MVDLLGRAGKLKEAYDLIEGMKV-KADFVVWGSLLG 467
++++ + G L +A + + + D + W SL+
Sbjct: 603 LLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIA 638
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 167/340 (49%), Gaps = 24/340 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS- 91
+ +V SWN++ A + S EAL F M + P+ +TF A+ +C+A +
Sbjct: 415 IQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTAS 474
Query: 92 --GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
GK+ G D V++A ++MY+KCG L+DAR +F+ I R+ ++W SML
Sbjct: 475 AIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLA 534
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
Y + +EA LF+ A E V + V +VL A + T
Sbjct: 535 AYGHHGLGKEAFELFQ-----------AMEAEKLVKPNKVTFVAVLDASTSRTSIAQGRE 583
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD--GMIEKDAVTWNSIIAIYAQN 267
H V+ GF+S+ + N L++ YA+ G +D ++ +FD ++D + W S+IA YAQ
Sbjct: 584 IHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQY 643
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A AL +F M + V+ N VT + L A H G L G C + + M + ++
Sbjct: 644 GQAERALKLFWTM-QQQGVRPNHVTFISALTACNHGGKLEQG-C--ELLSGMTPDHGILP 699
Query: 328 GTS----IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
+ I+D+ +CG++D A K + + +V +W A++
Sbjct: 700 ASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALL 739
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 173/340 (50%), Gaps = 30/340 (8%)
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFI--FGFHRDVFVSSALIDMYSKCGELSDARKLF 131
ST+ C +++C L L G++ H H F++S LI M++KCG L++A L
Sbjct: 44 STYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALA 103
Query: 132 DEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAI 191
D R ++ S T+M+ ++++ +A+ LF V + A+
Sbjct: 104 D----RFASVYSCTAMIRAWMEHGRPDKAMELFDRM---------------EVRPNCHAL 144
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI- 250
++++ACS + H + R F+ +GN LI Y++ G + +++ FD +
Sbjct: 145 IALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPR 204
Query: 251 --EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
++D VTWN++I+ + +NG A EAL +F M + N+VT +VL + G+L L
Sbjct: 205 ASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSL 264
Query: 309 G--KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF----NQMKEKNVRSWTAM 362
+ IH +++ +E V T+++D Y K G +D A + F ++ ++ + +AM
Sbjct: 265 EDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAM 324
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
I+ + +E+L LF+ M G +P+ +T VSVL+ACS
Sbjct: 325 ISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACS 364
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/639 (35%), Positives = 354/639 (55%), Gaps = 57/639 (8%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAI--KSCSALHDLHSGKQAHQQA 99
NS + L++ G EALR S CA+ SC + L G++ + Q
Sbjct: 35 NSTLKSLSKSGKLDEALRLIEYWPSKSPATAPDVEACALFLHSCISRKALEHGQRLYLQL 94
Query: 100 FIF------GFHRDVFVSSALIDMYSKCGELSDARKLFDE------IPQRIRNIVSWTSM 147
++ + + LI ++S C + +AR++F++ +P+ + W +M
Sbjct: 95 LLYRDRCNHNLLNNPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESV-----WVAM 149
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
GY +N +EALLL+ E + + + G + A + L ACS +
Sbjct: 150 GIGYSRNGYPKEALLLYYEMVCQFGQLG------------NFAFSMALKACSDLGDLQTG 197
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H V+K D + V N L+ Y+ G D + +VFDGM ++ V+WNS+IA +
Sbjct: 198 RAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKK 257
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
EA++ F ++++ + + VTL+ +L A + L GK IH ++K + V
Sbjct: 258 DGVFEAIEAF-RIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPV 316
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
S++DMY KCG +D R+ FN M+ K++ SW +I GY ++ R EA++ F +MI +G
Sbjct: 317 LNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGF 376
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ ITF+++LS CSHAGL +G M ++ I P VEHY C+VD+LGRAG++KEA
Sbjct: 377 SPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEAL 436
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
++++ M K +WGSLL +CR+H NV L E AK+LFELEPNN G +V+LSNIYANAG
Sbjct: 437 EIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAG 496
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD----KEHPQHEKIYEYLEELN 563
WE V+ R M+ R + K G S ++++ K+H F+ G + +++K+++ L E
Sbjct: 497 MWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVWKRLME-- 554
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
++EVGYV D V+HDV +E + M + HSE+LA NLRVC
Sbjct: 555 -AMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKNLRVCV 613
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH+ ++ +SKV R IV+RD+ RFH+FKDG+CSC DYW
Sbjct: 614 DCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCSCKDYW 652
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 20/229 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
NV SWNS+IA L + EA+ AF M+ + + T + C+ + L SGK+ H
Sbjct: 243 NVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIH 302
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
D V ++L+DMY+KCG + R++F+ + + +++ SW +++TGY N
Sbjct: 303 AVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGM--QGKDLTSWNTLITGYAINGR 360
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EA+ F+E + C G S D + ++LS CS + +G F +
Sbjct: 361 MTEAMESFQEMI-----CSGFSP-------DGITFIALLSGCSHAGL--ADDGCRLFEMM 406
Query: 217 R---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
+ G V L+D R G + + ++ M + W S++
Sbjct: 407 KMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLL 455
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/591 (38%), Positives = 336/591 (56%), Gaps = 43/591 (7%)
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC-GELSDARKLFDEIPQRIRNIVSWTSML 148
H ++AF+ + + L+ Y++ G L+DAR LFD IP ++VS+ ++L
Sbjct: 30 HGDLAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIPTP--DVVSYNTLL 87
Query: 149 TGYVQNDNAREALLLFKEFLLEESEC----------GGASENSDNVFV-----DSVAIAS 193
+ + +A A LF + + GA E + VF+ +SV+ +
Sbjct: 88 LCHFASGDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNA 147
Query: 194 VLS--ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
++S ACS G A + + + ++ Y G+V + K F+ M
Sbjct: 148 MVSGFACS-----GDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPV 202
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
++ V+WN+++A Y +N A +AL +F MV+ +V+ NA TLS+VLL ++L L GK
Sbjct: 203 RNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQ 262
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
IH +K+ L ++ VGTS++ MYCKCG + A F +M ++V +W AMI+GY H
Sbjct: 263 IHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGD 322
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
+EA++LF +M GV PN+ITFV VL+AC H GL G M + IEP V+HY
Sbjct: 323 GKEAINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYS 382
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPN 491
CMVDLL RAGKL+ A D I M + +G+LL ACR++KN++ E+AA KL E +P
Sbjct: 383 CMVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQ 442
Query: 492 NCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQ 551
+ G +V L+NIYA A +W+DV R R MK+ + KTPG+S +E++G +H F D+ HPQ
Sbjct: 443 SAGAYVQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQ 502
Query: 552 HEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------ 599
I+E L +L +++E+GYV D+ V+HDVD+ K L HSEKLA
Sbjct: 503 LYLIHEKLGQLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGM 562
Query: 600 ------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH ++IS + DREI++RD+ RFH+F+ G CSC DYW
Sbjct: 563 TLRIFKNLRVCGDCHNAAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
N+ SWN+V+A + + +ALR F +M R+ ++ P ST + CS L L GKQ
Sbjct: 204 NLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQI 263
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
HQ R++ V ++L+ MY KCG+LS A LF E+ R++V+W +M++GY Q+
Sbjct: 264 HQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEM--HTRDVVAWNAMISGYAQHG 321
Query: 156 NAREALLLFKEF 167
+ +EA+ LF+
Sbjct: 322 DGKEAINLFERM 333
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Query: 3 LSKSSSV-SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
LS++ +V +S+VS K ++ LF + + +V +WN++I+ A+ GD EA+ F
Sbjct: 272 LSRNLTVGTSLVSMYCKCGDLSSACILFGE-MHTRDVVAWNAMISGYAQHGDGKEAINLF 330
Query: 62 SSMRKLSLTPTRSTFPCAIKSC--SALHDLHSGKQAHQ-QAFIFGFHRDVFVSSALIDMY 118
M+ + P TF + +C + L D G Q + ++G V S ++D+
Sbjct: 331 ERMKDEGVEPNWITFVVVLTACIHTGLCDF--GIQCFEGMQELYGIEPRVDHYSCMVDLL 388
Query: 119 SKCGELSDARKLFDEIP 135
+ G+L A +P
Sbjct: 389 CRAGKLERAVDFIRSMP 405
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/644 (34%), Positives = 349/644 (54%), Gaps = 44/644 (6%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
++ +F++ + KN V SW VI+ A+ G+ +A+R FS M+ + P + + ++SC
Sbjct: 140 DVQKVFDEMLMKNLV-SWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSC 198
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
L GKQ H + ++ V +A+ +MY +CG L A+ +FD + + N V+
Sbjct: 199 LGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQ--NAVT 256
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
WT ++ GY Q AL LF +E E +D + VL C +
Sbjct: 257 WTGLMVGYTQAKKLEVALELFARMAMEGVE------------LDEFVFSIVLKVCCGLED 304
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ H ++K G +SEV VG L+D Y + G ++ + + F + E + V+W+++I+
Sbjct: 305 WDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISG 364
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
++Q+G + + +F + +S V N+ ++V A A L +G H IK L
Sbjct: 365 FSQSGRLEDCIKIFTSL-RSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVS 423
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ ++++ MY KCG++D AR+AF + E + +WTA+I+GY H A EAL F +M
Sbjct: 424 YLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQ 483
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
GVRPN +TF++VL+ACSH+GLV E +L +M ++ ++P ++HY CM+D RAG L
Sbjct: 484 SYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLL 543
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
+EA +LI M + D + W SLLG C H ++ LG+IAA+ LF L+P + ++LL N+Y
Sbjct: 544 QEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLY 603
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
+ G+WE+ R LM R L K S + ++G+VH F+VGD+ HPQ E IY LEE
Sbjct: 604 SAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEFK 663
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRI-----HSEKLA------------------N 600
+ + ++++ D ++ R HSEKLA N
Sbjct: 664 CSV-----IDSPVRLLNEEDDVSCSLSARKEQLLDHSEKLAIAFGLISTEDNAPILVFKN 718
Query: 601 LRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
LR C DCH + +S V R+IVVRDS RFH+FK G CSC DYW
Sbjct: 719 LRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 211/462 (45%), Gaps = 27/462 (5%)
Query: 45 IADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF 104
+ L++ G EA M ++ T ++ C ++C L L G+ H +
Sbjct: 59 LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVK 118
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
+ + + L+ MY CG D +K+FDE+ ++N+VSW +++ Y +N +A+ LF
Sbjct: 119 NPSGSIENCLLRMYCDCGSCIDVQKVFDEM--LMKNLVSWVIVISAYAKNGELEKAIRLF 176
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
+ + + +S S+L +C + + + H VI+ ++ +
Sbjct: 177 SDM------------QASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANIT 224
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
V + + Y R G ++ ++ VFDGM ++AVTW ++ Y Q AL++F +M
Sbjct: 225 VETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAME- 283
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
V+ + S VL L +G+ IH ++K+ E V VGT ++D Y KCG ++ A
Sbjct: 284 GVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESA 343
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
++F ++ E N SW+A+I+G+ R + + +F + GV N + SV AC+
Sbjct: 344 YRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQ 403
Query: 405 GLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
+ G + H I+ G+ Y MV + + G+L A E + + D V
Sbjct: 404 ANLNMG-----SQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAV 457
Query: 461 VWGSLLGACRIHKNV--DLGEIAAKKLFELEPNNCGYHVLLS 500
W +++ H N LG + + + PN + +L+
Sbjct: 458 AWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLT 499
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 132/266 (49%), Gaps = 18/266 (6%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKY--VDKNNVFSWNSVIADLARGGDSVEAL 58
+KL S VS VD + ++ + + + + + N SW+++I+ ++ G + +
Sbjct: 316 VKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCI 375
Query: 59 RAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMY 118
+ F+S+R + + ++C+A +L+ G QAH A G ++ SA++ MY
Sbjct: 376 KIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMY 435
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
SKCG L AR+ F+ I + + V+WT++++GY + NA EAL F+
Sbjct: 436 SKCGRLDYARRAFESIDE--PDAVAWTAIISGYAYHGNAAEALGFFRRM----------- 482
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK-RGFDSEVGVGNTLIDAYARGG 237
S V ++V +VL+ACS + + G + + G + + +ID Y+R G
Sbjct: 483 -QSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAG 541
Query: 238 HVDVSRKVFDGM-IEKDAVTWNSIIA 262
+ + ++ + M E DA++W S++
Sbjct: 542 LLQEALELINRMPFEPDAMSWKSLLG 567
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/629 (35%), Positives = 352/629 (55%), Gaps = 39/629 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
++ SWN+++ G AL F M L + A+ +C L G++
Sbjct: 185 DIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREI 244
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H A G +DV V ++L+DMY KCG + A +F ++P +R +V+W M+ GY N+
Sbjct: 245 HGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMP--LRTVVTWNCMIGGYALNE 302
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+A F + + D V+ V ++L+AC++ + H +V+
Sbjct: 303 RPVDAFDCFMQMRV------------DGFQVEVVTAINLLTACAQTESSLFGRSVHAYVV 350
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+R F V + L++ Y + G V+ S K+F + +K V+WN++IA Y + EA+
Sbjct: 351 RRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIA 410
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F +++ + + T++ V+ A LG +R K +H ++K+ +S ++ +++ MY
Sbjct: 411 LFLELLNQP-LYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMY 469
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
+CG + +R+ F++M K+V SW +I GY +H + + AL++F +M +G+ PN TFV
Sbjct: 470 ARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFV 529
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
SVL+ACS +GL EGW N+M E+ + P +EHYGCM DLLGRAG+L+E IE M +
Sbjct: 530 SVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPI 589
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
+WGSLL A R ++D+ E AA+++F+LE NN G +V+LS++YA+AGRWEDVER
Sbjct: 590 APTSRIWGSLLTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERI 649
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
RSLMK + L +T SLVEL K +F+ GD HPQ EKI+E+ + L+ + +G D
Sbjct: 650 RSLMKEKGLRRTEARSLVELNNKECSFVNGDMSHPQSEKIHEFSDILS---RNIGEDLDS 706
Query: 576 TSVIHDVDQEEKEMTL--RIHSEKLA------------------NLRVCGDCHTVIRLIS 615
+S + D D T+ HS +LA N+RVC CH ++LIS
Sbjct: 707 SSNLRDSDPFASSTTVLPNKHSVRLAVAFGLISSEAGSPVLVKKNVRVCNHCHHALKLIS 766
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
K R+IVV D+K +H F DG C CGDYW
Sbjct: 767 KYSGRKIVVGDTKIYHIFSDGSCCCGDYW 795
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 231/480 (48%), Gaps = 38/480 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V + F N +I A ++AL A+ +M P R TFP +K C+ L G
Sbjct: 80 VTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEG 139
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ AH G DV+ +++L+ +Y+K G + DA ++FD +P R+IVSW +M+ GYV
Sbjct: 140 RAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPA--RDIVSWNTMVDGYV 197
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N AL F+E ++ V DSV + + L+AC + + HG
Sbjct: 198 SNGMGALALACFREM-----------NDALQVGHDSVGVIAALAACCLESALALGREIHG 246
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ I+ G + +V VG +L+D Y + G+V + VF M + VTWN +I YA N +
Sbjct: 247 YAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVD 306
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A D F QM + + VT +L A A G+ +H V++ V++ T+++
Sbjct: 307 AFDCFMQM-RVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALL 365
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+MY K G+V+ + K F Q+ +K + SW MIA Y +EA+ LF +++ + P+Y
Sbjct: 366 EMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYF 425
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG-------CMVDLLGRAGKLKE 445
T +V+ A G +++ H + ++ G YG ++ + R G +
Sbjct: 426 TMTTVVPAFVLLGSIRQCKQM-----HSYIVKLG---YGDSTLIMNAVMHMYARCGNIVA 477
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE-----LEPNNCGYHVLLS 500
+ ++ + M K D + W +++ IH G+IA + E +EPN + +L+
Sbjct: 478 SREIFDKMPGK-DVISWNTIIIGYAIHGQ---GKIALEMFDEMKCSGMEPNESTFVSVLT 533
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 10/141 (7%)
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
S+I + G++D A AF + MI G+ +AL + M+ AG RP
Sbjct: 59 SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRAGKLKE 445
+ TF VL C+ AG + EG H I+ G V +V L + G + +
Sbjct: 119 DRFTFPVVLKCCARAGALGEG-----RAAHAAVIKLGLGADVYTANSLVALYAKLGLVGD 173
Query: 446 AYDLIEGMKVKADFVVWGSLL 466
A + +GM + D V W +++
Sbjct: 174 AERVFDGMPAR-DIVSWNTMV 193
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/574 (38%), Positives = 329/574 (57%), Gaps = 34/574 (5%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L G Q H FG VS LI++YSK + ++FDE P++ + +W+S++
Sbjct: 41 LRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKK--SSTTWSSVI 98
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
+ + QN+ AL F+ L +D V D S AC + + V +
Sbjct: 99 SAFAQNEAPLLALQFFRRML------------NDGVRPDDHIYPSATKACGFLRRSDVGK 146
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H +K G+ +V VG++L+D YA+ G + +R +FD M E++ V+W+ +I YAQ
Sbjct: 147 SVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLD 206
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
EAL +F Q + DV N T S+V+ + L LGK IH +KM + S VG
Sbjct: 207 DGVEALTLFKQALIE-DVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVG 265
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
+++I +Y KCG ++ A + F+++ +N+ W +M+ H + LF +M G++
Sbjct: 266 SALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMK 325
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
PN+I F+SVL ACSHAGLV++G + + M ++ IEP EHY +VDLLGRAGKL+EA
Sbjct: 326 PNFIXFLSVLYACSHAGLVEKGREYFSLM-RDYGIEPETEHYASLVDLLGRAGKLQEAVS 384
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
+I+ M ++ VWG+LL CRIHK+ ++ A ++ E++ ++ G HVLLSN YA AGR
Sbjct: 385 VIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGR 444
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
+E+ R R ++++R + K G S VE KVH F GD+ H + +IYE LEEL ++++
Sbjct: 445 YEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEK 504
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
GYV D + V+ VD EEK T+R HSE+LA NLRVCGDCH
Sbjct: 505 AGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAA 564
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+ +SK R ++VRD+ RFH F+DG CSCGDYW
Sbjct: 565 IKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 176/336 (52%), Gaps = 16/336 (4%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K + +W+SVI+ A+ + AL+ F M + P +P A K+C L GK
Sbjct: 88 KKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKS 147
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H A G++ DVFV S+L+DMY+KCGE+ DAR LFDE+P+ RN+VSW+ M+ GY Q
Sbjct: 148 VHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPE--RNVVSWSGMIYGYAQL 205
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
D+ EAL LFK+ L+E+ V V+ +SV+ CS T + + HG
Sbjct: 206 DDGVEALTLFKQALIED------------VDVNDFTFSSVIRVCSSSTFLELGKLIHGLC 253
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+K FDS VG+ LI Y++ G ++ + +VFD + ++ WNS++ AQ+
Sbjct: 254 LKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVF 313
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+F++M + +K N + +VL A +H G++ G+ + +E S++D+
Sbjct: 314 GLFEEM-GNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDL 372
Query: 335 YCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
+ G++ A QM + S W A++ G +H
Sbjct: 373 LGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIH 408
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 9/196 (4%)
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
+LL+ LR G +H ++K L+ +V ++I++Y K + + F++ +K+
Sbjct: 31 LLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKS 90
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS--HAGLVQEGWHW 413
+W+++I+ + + AL F +M+ GVRP+ + S AC V + H
Sbjct: 91 STTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHC 150
Query: 414 LNT-MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW-GSLLGACRI 471
L G+ ++ G +VD+ + G++ +A L + M + + V W G + G ++
Sbjct: 151 LAVKTGYYCDVFVG----SSLVDMYAKCGEIGDARHLFDEMPER-NVVSWSGMIYGYAQL 205
Query: 472 HKNVDLGEIAAKKLFE 487
V+ + + L E
Sbjct: 206 DDGVEALTLFKQALIE 221
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 1 MKLSKSSSV-SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALR 59
M SS V S+++S K +F++ + N+ WNS++ A+ +
Sbjct: 256 MSFDSSSFVGSALISLYSKCGVIEGAYQVFDE-IPTRNLGLWNSMLIACAQHAHTQRVFG 314
Query: 60 AFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
F M + + P F + +CS + G++ +G + ++L+D+
Sbjct: 315 LFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLG 374
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+ G+L +A + ++P R V W ++LTG
Sbjct: 375 RAGKLQEAVSVIKQMPMRPTESV-WGALLTG 404
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/564 (39%), Positives = 329/564 (58%), Gaps = 35/564 (6%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H GF + + L++ G++ AR++FDE+P+ I W ++ GYV
Sbjct: 28 KKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKP--RIFLWNTLFKGYV 85
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+N E++LL+K+ V D V+ A S++ V H
Sbjct: 86 RNQLPFESVLLYKKM------------RDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHA 133
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V+K GF+ V L+ Y + G + + +F+ M KD V WN+ IA+ Q G +A
Sbjct: 134 HVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAI 193
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL+ F++M V+ ++ T+ ++L A LG L +G+ I+D+ K ++E ++IV + +
Sbjct: 194 ALEYFNKMCADA-VQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVENARL 252
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DM+ KCG + AR F+ MK++NV SW+ MI GY M+ + EAL LF M G+RPNY+
Sbjct: 253 DMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYV 312
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMG--HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
TF+ VLSACSHAGLV EG + + M ++ N+EP EHY CMVDLLGR+G L+EAY+ I
Sbjct: 313 TFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFI 372
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
+ M+V+ D +WG+LLGAC +H+++ LG+ A L E P+ YHVLLSNIYA AG+W+
Sbjct: 373 KKMRVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWD 432
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
V++ RS M+ K +S VE GK+H F GD HPQ + IYE L+E+ K++ +G
Sbjct: 433 CVDKVRSKMRKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKIRNMG 492
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
YV D SV HDV+ EEKE +L HSEKLA NLR C DCH +
Sbjct: 493 YVPDTGSVFHDVEMEEKESSLSHHSEKLAIAFGLINGRAGHPIRVMKNLRTCDDCHVFSK 552
Query: 613 LISKVVDREIVVRDSKRFHYFKDG 636
+S++ REI++RD RFH+F++G
Sbjct: 553 FVSRLTSREIIMRDKNRFHHFRNG 576
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 167/341 (48%), Gaps = 19/341 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ K +F WN++ R E++ + MR L + P T+P +K+ S L L G
Sbjct: 69 MPKPRIFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCG 128
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H GF V++ L+ MY K GELS A LF+ + +++++V+W + + V
Sbjct: 129 VSLHAHVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESM--QVKDLVAWNAFIAVCV 186
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q N+ AL F + +D V DS + S+LSAC ++ + E +
Sbjct: 187 QTGNSAIALEYFNKMC------------ADAVQFDSFTVVSMLSACGQLGSLDIGEEIYD 234
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
K + + V N +D + + G + +R +FD M +++ V+W+++I YA NG + E
Sbjct: 235 RARKEEIECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGE 294
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM---DLEESVIVGT 329
AL +F M+++ ++ N VT VL A +H G++ GK ++++ +LE
Sbjct: 295 ALALF-TMMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYA 353
Query: 330 SIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + G ++ A + +M+ E + W A++ +H
Sbjct: 354 CMVDLLGRSGLLEEAYEFIKKMRVEPDTGIWGALLGACAVH 394
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/636 (34%), Positives = 356/636 (55%), Gaps = 36/636 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
L K + ++ SWNS++A G S++AL SM + TF A+ +C
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
G+ H + G + + +AL+ MY K GE+S++R++ ++P+R ++V+W
Sbjct: 358 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR--DVVAWN 415
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+++ GY ++++ +AL F+ +E G S N + + SVLSAC + +
Sbjct: 416 ALIGGYAEDEDPDKALAAFQTMRVE-----GVSSNY-------ITVVSVLSAC-LLPGDL 462
Query: 206 VTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ G H +++ GF+S+ V N+LI YA+ G + S+ +F+G+ ++ +TWN+++A
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
A +G E L + +M +S V + + S L A A L VL G+ +H +K+ E
Sbjct: 523 NAHHGHGEEVLKLVSKM-RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 581
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ + DMY KCG++ K +++ SW +I+ G H E F++M+
Sbjct: 582 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+ G++P ++TFVS+L+ACSH GLV +G + + + +F +EP +EH C++DLLGR+G+L
Sbjct: 642 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 701
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
EA I M +K + +VW SLL +C+IH N+D G AA+ L +LEP + +VL SN++
Sbjct: 702 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMF 761
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A GRWEDVE R M + + K S V+L+ KV +F +GD+ HPQ +IY LE++
Sbjct: 762 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIK 821
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
++E GYV D + + D D+E+KE L HSE+LA NLR+C
Sbjct: 822 KLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICS 881
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
DCH+V + +S+V+ R IV+RD RFH+F+ GL G
Sbjct: 882 DCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKG 917
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 245/486 (50%), Gaps = 25/486 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDL-HSGKQA 95
N SWN++++ + R G +E + F M L + P+ + +C + G Q
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 64
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H G DV+VS+A++ +Y G +S +RK+F+E+P R N+VSWTS++ GY
Sbjct: 65 HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR--NVVSWTSLMVGYSDKG 122
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
E + ++K E G +ENS ++ V+S+C + + G V+
Sbjct: 123 EPEEVIDIYKGM---RGEGVGCNENS---------MSLVISSCGLLKDESLGRQIIGQVV 170
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
K G +S++ V N+LI G+VD + +FD M E+D ++WNSI A YAQNG E+
Sbjct: 171 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 230
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F M + D + N+ T+S +L + H+ + G+ IH V+KM + V V +++ MY
Sbjct: 231 IFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMY 289
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
G+ A F QM K++ SW +++A + R+ +AL L MI +G NY+TF
Sbjct: 290 AGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT 349
Query: 396 SVLSACSHAGLVQEG--WHWLNTM-GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
S L+AC ++G H L + G +N G +V + G+ G++ E+ ++
Sbjct: 350 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG----NALVSMYGKIGEMSESRRVLLQ 405
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M + D V W +L+G ++ D +AA + +E + Y ++S + A + +
Sbjct: 406 MP-RRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 463
Query: 513 ERTRSL 518
ER + L
Sbjct: 464 ERGKPL 469
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 204/452 (45%), Gaps = 31/452 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +++ + SWNS+ A A+ G E+ R FS MR+ +T + +
Sbjct: 200 IFDQMSERDTI-SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVD 258
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ H GF V V + L+ MY+ G +A +F ++P ++++SW S+
Sbjct: 259 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT--KDLISWNSL 316
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ +V + + +AL L + S V+ V S L+AC T +
Sbjct: 317 MASFVNDGRSLDALGLLCSMI------------SSGKSVNYVTFTSALAAC--FTPDFFE 362
Query: 208 EG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+G HG V+ G +GN L+ Y + G + SR+V M +D V WN++I YA
Sbjct: 363 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 422
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG-VLRLGKCIHDQVIKMDLEES 324
++ +AL F Q ++ V N +T+ +VL A G +L GK +H ++ E
Sbjct: 423 EDEDPDKALAAF-QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 481
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V S+I MY KCG + ++ FN + +N+ +W AM+A H E L L KM
Sbjct: 482 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 541
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRA 440
GV + +F LSA + +++EG H ++ G EH + D+ +
Sbjct: 542 FGVSLDQFSFSEGLSAAAKLAVLEEGQQL-----HGLAVKLGFEHDSFIFNAAADMYSKC 596
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G++ E ++ V W L+ A H
Sbjct: 597 GEIGEVVKMLPP-SVNRSLPSWNILISALGRH 627
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 162/337 (48%), Gaps = 26/337 (7%)
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+RN VSW +M++G V+ E + F++ C + S S IAS+++A
Sbjct: 3 VRNEVSWNTMMSGIVRVGLYLEGMEFFRKM------CDLGIKPS------SFVIASLVTA 50
Query: 198 CSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
C R + + EG HGFV K G S+V V ++ Y G V SRKVF+ M +++ V
Sbjct: 51 CGR-SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVV 109
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+W S++ Y+ G E +D++ M + V CN ++S V+ + L LG+ I Q
Sbjct: 110 SWTSLMVGYSDKGEPEEVIDIYKGM-RGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQ 168
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
V+K LE + V S+I M G VD A F+QM E++ SW ++ A Y + E+
Sbjct: 169 VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 228
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
+F M + N T ++LS H + W + H ++ G + C+ +
Sbjct: 229 FRIFSLMRRFHDEVNSTTVSTLLSVLGHV----DHQKWGRGI-HGLVVKMGFDSVVCVCN 283
Query: 436 LLGR----AGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
L R AG+ EA + + M K D + W SL+ +
Sbjct: 284 TLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 319
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/560 (37%), Positives = 332/560 (59%), Gaps = 34/560 (6%)
Query: 103 GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALL 162
GF D ++ + ++ M+ KCG + DAR+LFDE+P+R N+VSW ++++G V + EA
Sbjct: 5 GFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPER--NLVSWNTIISGLVDVGDFMEAFR 62
Query: 163 LFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE 222
LF E S+ G S A ++ A + + + + H +K G +
Sbjct: 63 LFLNMWEEFSDAG------------SFTFAVMIRASAGLELISIGRQLHACTLKMGIGDD 110
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
+ V LID Y++ G ++ +R VF+ M EK V WN+IIA YA +G + EALD++ +M +
Sbjct: 111 IFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEM-R 169
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
+ VK + T S ++ A L + K H +I+ ++ T+++D Y K G+++
Sbjct: 170 DSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIE 229
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
AR F++M KNV SW A+I GYG H R EA++LF +MI+ + PN+ITF++VLSACS
Sbjct: 230 DARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACS 289
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW 462
H+GL + GW +MG + I+P HY CM++L+GR G L EA LI G K +W
Sbjct: 290 HSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMW 349
Query: 463 GSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNR 522
+LL ACR+++N +LG+ AA+KL+ +EP+ +++L NIY +AG ++ +K +
Sbjct: 350 AALLTACRVNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRK 409
Query: 523 RLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDV 582
L P S +E++ + H FL GD HPQ ++IY+ +++L +++ + GYV + +++ DV
Sbjct: 410 GLRMRPVCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDV 469
Query: 583 DQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVV 624
D++E+ + L HSEKLA R+CGDCH I+LI++V REIV+
Sbjct: 470 DEQEERVRL-YHSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVI 528
Query: 625 RDSKRFHYFKDGLCSCGDYW 644
RD+ RFH+FK G CSC DYW
Sbjct: 529 RDAGRFHHFKHGHCSCEDYW 548
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 211/433 (48%), Gaps = 57/433 (13%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ ++N V SWN++I+ L GD +EA R F +M + TF I++ + L
Sbjct: 32 LFDEMPERNLV-SWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMIRASAGLE 90
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G+Q H G D+FVS ALIDMYSKCG + DAR +F+E+P+ + V W ++
Sbjct: 91 LISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPE--KTTVGWNTI 148
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + + EAL ++ E V +D + ++ C+R+
Sbjct: 149 IAGYALHGYSEEALDMYYEM------------RDSGVKMDHFTFSMIVRICARLASVEHA 196
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ AH +I+ GF S++ L+D Y++ G ++ +R VFD M K+ ++WN++I Y +
Sbjct: 197 KQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNH 256
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G +EA+++F+QM++ + N +T AVL A +H G+ G I Q + D
Sbjct: 257 GRGSEAVELFEQMIQER-MNPNHITFLAVLSACSHSGLSERGWEIF-QSMGRD------- 307
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
N++K + + + MI G EAL L + A
Sbjct: 308 ---------------------NRIKPRAMH-YACMIELMGREGLLDEALAL---IRGAPF 342
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE--FNIEPG-VEHYGCMVDLLGRAGKLK 444
+P + ++L+AC V E + L E + +EP + +Y ++++ AG LK
Sbjct: 343 KPTANMWAALLTACR----VNENFE-LGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLK 397
Query: 445 EAYDLIEGMKVKA 457
EA D++ +K K
Sbjct: 398 EAADVVHTLKRKG 410
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 152/295 (51%), Gaps = 17/295 (5%)
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+I GF+ + + N ++ + + G + +R++FD M E++ V+WN+II+ G EA
Sbjct: 1 MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+F M + + T + ++ A A L ++ +G+ +H +KM + + + V ++ID
Sbjct: 61 FRLFLNMWEEFS-DAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALID 119
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY KCG ++ AR F +M EK W +IAGY +H + EALD++Y+M +GV+ ++ T
Sbjct: 120 MYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFT 179
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRAGKLKEAYDL 449
F ++ C+ V+ H I G + +VD + G++++A +
Sbjct: 180 FSMIVRICARLASVEHA-----KQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHV 234
Query: 450 IEGMKVKADFVVWGSLLGACRIH----KNVDLGEIAAKKLFELEPNNCGYHVLLS 500
+ M K + + W +L+G H + V+L E ++ + PN+ + +LS
Sbjct: 235 FDKMASK-NVISWNALIGGYGNHGRGSEAVELFEQMIQE--RMNPNHITFLAVLS 286
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 166/387 (42%), Gaps = 70/387 (18%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F + +K V WN++IA A G S EAL + MR + TF ++ C+ L
Sbjct: 133 VFEEMPEKTTV-GWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLA 191
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ KQAH GF D+ ++AL+D YSK G + DAR +FD++ +N++SW ++
Sbjct: 192 SVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMAS--KNVISWNAL 249
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + EA+ LF++ + E + + +VLSACS
Sbjct: 250 IGGYGNHGRGSEAVELFEQMIQERMN------------PNHITFLAVLSACS-------- 289
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H + +RG++ +G D I+ A+ + +I + +
Sbjct: 290 ---HSGLSERGWEIFQSMGR-------------------DNRIKPRAMHYACMIELMGRE 327
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE--SV 325
GL EAL +++ K A +A+L A LGK +++ M+ ++ +
Sbjct: 328 GLLDEAL----ALIRGAPFKPTANMWAALLTACRVNENFELGKFAAEKLYGMEPDKLNNY 383
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR-----SWT-------AMIAGYGMHCRAR 373
IV ++++Y G + A + +K K +R SW ++G H + +
Sbjct: 384 IV---LLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKRRPHVFLSGDNRHPQRK 440
Query: 374 EALD----LFYKMIKAGVRPNYITFVS 396
E L ++ K G PN T +
Sbjct: 441 EIYQKVDKLMLEISKYGYVPNQKTLLP 467
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/641 (36%), Positives = 371/641 (57%), Gaps = 35/641 (5%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N ++F K+ V SWNS+I+ L EA+ F +MR+ + P++ + + SC
Sbjct: 408 NARSIFQLMPSKDTV-SWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSC 466
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
++L + G+Q H + G DV VS+AL+ +Y++ + + +K+F +P+ + VS
Sbjct: 467 ASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEY--DQVS 524
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W S + ++ ++L ++ LE + G + V ++LSA S +++
Sbjct: 525 WNSFIGALATSE---ASVLQAIKYFLEMMQAGWKP--------NRVTFINILSAVSSLSL 573
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK-DAVTWNSIIA 262
+ H ++K + + NTL+ Y + ++ +F M E+ D V+WN++I+
Sbjct: 574 LELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMIS 633
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
Y NG+ +A+ + M++ + + TL+ VL A A + L G +H I+ LE
Sbjct: 634 GYIHNGILHKAMGLVWLMMQKGQ-RLDDFTLATVLSACASVATLERGMEVHACAIRACLE 692
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
V+VG++++DMY KCG++D A + F M +N+ SW +MI+GY H +AL LF +M
Sbjct: 693 AEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQM 752
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
+ G P+++TFV VLSACSH GLV EG+ +MG + + P +EH+ CMVDLLGRAG
Sbjct: 753 KQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGD 812
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGA-CRIH-KNVDLGEIAAKKLFELEPNNCGYHVLLS 500
+K+ + I+ M + + ++W ++LGA CR + +N +LG AAK L ELEP N +VLLS
Sbjct: 813 VKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLS 872
Query: 501 NIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLE 560
N++A G+WEDVE R M+N + K G S V ++ VH F+ GD+ HP+ EKIY+ L+
Sbjct: 873 NMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLK 932
Query: 561 ELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------NLRV 603
E+ K++++GYV + ++D++ E KE L HSEKLA NLRV
Sbjct: 933 EIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTRQSELPIRIIKNLRV 992
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CGDCHT + IS +V+R+I++RDS RFH+F G+CSC DYW
Sbjct: 993 CGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 218/449 (48%), Gaps = 21/449 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL- 86
LF++ KN V SW+ +++ A+ G EA F + L P A+++C L
Sbjct: 96 LFDEMPQKNLV-SWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELG 154
Query: 87 -HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC-GELSDARKLFDEIPQRIRNIVSW 144
+ L G + H + D+ +S+ L+ MYS C + DAR++F+EI +++ SW
Sbjct: 155 PNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEI--KMKTSASW 212
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
S+++ Y + +A A LF E +E ++ F V +A L C +
Sbjct: 213 NSIISVYCRRGDAISAFKLFSSMQREATELN--CRPNEYTFCSLVTVACSLVDCGLTLL- 269
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
E + K F ++ VG+ L+ +AR G +D ++ +F+ M +++AVT N ++
Sbjct: 270 ---EQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGL 326
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL----RLGKCIHDQVIKMD 320
A+ EA +F +M ++ NA + + +L A L R G+ +H +I+
Sbjct: 327 ARQHQGEEAAKIFKEMKDLVEI--NASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNA 384
Query: 321 LEES-VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
L + +++G +++++Y KC +D AR F M K+ SW ++I+G + R EA+ F
Sbjct: 385 LVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACF 444
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
+ M + G+ P+ + +S LS+C+ G + G ++ G + ++ V ++ L
Sbjct: 445 HTMRRNGMVPSKFSVISTLSSCASLGWIMLG-QQIHGEGIKCGLDLDVSVSNALLTLYAE 503
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
++E Y + + + D V W S +GA
Sbjct: 504 TDCMEE-YQKVFFLMPEYDQVSWNSFIGA 531
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 199/421 (47%), Gaps = 40/421 (9%)
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
SS L P + SC+ + D H Q H Q + G DVF + L++++ +
Sbjct: 32 SSHHHLHFPPLNLDYNRYRDSCT-VEDAH---QLHLQIYKTGLTSDVFWCNTLVNIFVRA 87
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G L A+KLFDE+PQ +N+VSW+ +++GY QN EA +LF+ + S
Sbjct: 88 GNLVSAQKLFDEMPQ--KNLVSWSCLVSGYAQNGMPDEACMLFRGII------------S 133
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYAR-GGH 238
+ + AI S L AC + N + G HG + K + S++ + N L+ Y+
Sbjct: 134 AGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSAS 193
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK-STDVKCNAVTLSAVL 297
+D +R+VF+ + K + +WNSII++Y + G A A +F M + +T++ C +
Sbjct: 194 IDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCS 253
Query: 298 LAIAHLGVLRLGKCIHDQVI----KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
L ++ G + +Q++ K + + VG++++ + + G +D A+ F QM +
Sbjct: 254 LVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDD 313
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
+N + ++ G + EA +F +M K V N ++ +LSA + ++EG
Sbjct: 314 RNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASSYAVLLSAFTEFSNLKEG--- 369
Query: 414 LNTMGHEFN--------IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
G E + ++ + +V+L + + A + + M K D V W S+
Sbjct: 370 -KRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSK-DTVSWNSI 427
Query: 466 L 466
+
Sbjct: 428 I 428
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 23/305 (7%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H + K G S+V NTL++ + R G++ ++K+FD M +K+ V+W+ +++ YAQNG+
Sbjct: 62 HLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMP 121
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG--VLRLGKCIHDQVIKMDLEESVIVG 328
EA +F ++ S + N + + L A LG +L+LG IH + K +++
Sbjct: 122 DEACMLFRGII-SAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLS 180
Query: 329 TSIIDMYCKC-GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++ MY C +D AR+ F ++K K SW ++I+ Y A A LF M +
Sbjct: 181 NVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREAT 240
Query: 388 ----RPNYITFVSVLS-ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY---GCMVDLLGR 439
RPN TF S+++ ACS LV G L M V+ +V R
Sbjct: 241 ELNCRPNEYTFCSLVTVACS---LVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFAR 297
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL----EPNNCGY 495
G + A + E M + + G ++G R H+ GE AAK E+ E N Y
Sbjct: 298 YGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQ----GEEAAKIFKEMKDLVEINASSY 353
Query: 496 HVLLS 500
VLLS
Sbjct: 354 AVLLS 358
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/652 (33%), Positives = 355/652 (54%), Gaps = 35/652 (5%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
++++S K + + +FN+ + + + SWNSVI+ + G + EA+ F M
Sbjct: 456 NALISFYAKSNMIGDAVLVFNR-MPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQ 514
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
T + +C+ +G+ H + G + +++AL+DMYS C + +
Sbjct: 515 ELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQ 574
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F + Q+ N+VSWT+M+T Y++ + L +E +L D + D
Sbjct: 575 IFRSMGQK--NVVSWTAMITSYMRAGLFDKVAGLLQEMVL------------DGIRPDVF 620
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
A+ S L A + + HG+ I+ G + + V N L++ Y + +V+ +R +FD +
Sbjct: 621 AVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRV 680
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
KD ++WN++I Y++N E+ +F M+ + NAVT++ +L A A + L G
Sbjct: 681 TNKDVISWNTLIGGYSRNNFPNESFSLFSDML--LQFRPNAVTMTCILPAAASISSLERG 738
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
+ IH ++ E +++DMY KCG + +AR F+++ +KN+ SWT MIAGYGMH
Sbjct: 739 REIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMH 798
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
+ A+ LF +M +G+ P+ +F ++L AC H+GL EG + M E+ IEP ++H
Sbjct: 799 GFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKH 858
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
Y C+VDLL R G LKEA + IE M ++ D +W SLL CRIHKNV L E A K+F+LE
Sbjct: 859 YTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLE 918
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
P N GY+VLL+NIYA A RWE V++ ++ + R L + G+S +E+R KVH F+ ++ H
Sbjct: 919 PENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNH 978
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
P +I E+L+++ ++++ G+ + D + L HS KLA
Sbjct: 979 PDWNRIAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLPE 1038
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
N +VC CH + ISK+ +REI++RDS RFH F+ G CSC Y
Sbjct: 1039 GRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 221/482 (45%), Gaps = 36/482 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ K NV WN ++ A+ G+ E+L F M +L + P C +K + L
Sbjct: 372 VFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLS 431
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G AH GF V +ALI Y+K + DA +F+ +P+ ++ +SW S+
Sbjct: 432 CARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPR--QDTISWNSV 489
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G N EA+ LF + E +DSV + SVL AC++
Sbjct: 490 ISGCSSNGLNSEAIELFIRMWTQGQE------------LDSVTLLSVLPACAQSRYWFAG 537
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
HG+ +K G E + N L+D Y+ + ++F M +K+ V+W ++I Y +
Sbjct: 538 RVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRA 597
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL + + +MV ++ + +++ L A A L+ GK +H I+ +E+ + V
Sbjct: 598 GLFDKVAGLLQEMVLD-GIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPV 656
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
++++MY KC V+ AR F+++ K+V SW +I GY + E+ LF M+
Sbjct: 657 ANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-F 715
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV--EHYG--CMVDLLGRAGKL 443
RPN +T +L A + ++ G H + + G + Y +VD+ + G L
Sbjct: 716 RPNAVTMTCILPAAASISSLERGREI-----HAYALRRGFLEDSYASNALVDMYVKCGAL 770
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHV 497
A L + + K + + W ++ +H G+ A LFE +EP+ +
Sbjct: 771 LVARVLFDRL-TKKNLISWTIMIAGYGMH---GFGK-HAIALFEQMRGSGIEPDAASFSA 825
Query: 498 LL 499
+L
Sbjct: 826 IL 827
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 182/379 (48%), Gaps = 26/379 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V W S+++ A+ GD EA+ F M+ ++P C +K S+L L G+ H
Sbjct: 168 DVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIH 227
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G + V++ALI +YS+CG + DA ++FD + R+ +SW SM+ G N
Sbjct: 228 GLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSM--HPRDAISWNSMIGGCFSNGW 285
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
A+ LF + + +E + SV + SVL AC+ + + + HG+ +K
Sbjct: 286 HGTAVDLFSKMWSQGTE------------ISSVTVLSVLPACAGLGYGLIGKAVHGYSVK 333
Query: 217 R----GFDS------EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV-TWNSIIAIYA 265
G DS + +G+ L+ Y + G + +R+VFD M K V WN I+ YA
Sbjct: 334 SGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYA 393
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+ G E+L +F QM + + +S +L I L R G H ++K+
Sbjct: 394 KVGEFEESLSLFVQM-HELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQC 452
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
V ++I Y K + A FN+M ++ SW ++I+G + EA++LF +M
Sbjct: 453 AVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQ 512
Query: 386 GVRPNYITFVSVLSACSHA 404
G + +T +SVL AC+ +
Sbjct: 513 GQELDSVTLLSVLPACAQS 531
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 218/451 (48%), Gaps = 50/451 (11%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH----- 96
N I L + GD ALR S + + ++ ++ C L + K+AH
Sbjct: 70 NLRIQRLCQAGDLAGALRLLGSDGGVDVR----SYCMVVQLCGEERSLEAAKRAHALIRA 125
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
A G V + L+ Y KCG+L +AR +FD +P + ++ WTS+++ Y + +
Sbjct: 126 SSAAATGGKGSV-LGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGD 184
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFV 214
+EA+ LF++ +C G S D+ A++ VL S ++ +TEG HG +
Sbjct: 185 FQEAVSLFRQM-----QCCGVSP-------DAHAVSCVLKCVS--SLGSLTEGEVIHGLL 230
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
K G V N LI Y+R G ++ + +VFD M +DA++WNS+I NG A+
Sbjct: 231 EKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAV 290
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK------MDLEESVI-- 326
D+F +M S + ++VT+ +VL A A LG +GK +H +K +D +S I
Sbjct: 291 DLFSKMW-SQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDD 349
Query: 327 --VGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+G+ ++ MY KCG + AR+ F+ M K NV W ++ GY E+L LF +M
Sbjct: 350 AALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMH 409
Query: 384 KAGVRPNYITFVSVLS-----ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
+ G+ P+ +L +C+ GLV G ++ +G F + V + ++
Sbjct: 410 ELGIAPDEHAISCLLKCITCLSCARDGLVAHG--YIVKLG--FGAQCAVCN--ALISFYA 463
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
++ + +A + M + D + W S++ C
Sbjct: 464 KSNMIGDAVLVFNRMP-RQDTISWNSVISGC 493
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 221/504 (43%), Gaps = 53/504 (10%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+ SWNS+I G A+ FS M + T + +C+ L GK H
Sbjct: 269 DAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVH 328
Query: 97 ----QQAFIFGFHR------DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ ++G D + S L+ MY KCG+++ AR++FD + + N+ W
Sbjct: 329 GYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSK-GNVHVWNL 387
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS--ACSRVTVN 204
++ GY + E+L LF ++ E G A D AI+ +L C +
Sbjct: 388 IMGGYAKVGEFEESLSLF----VQMHELGIAP--------DEHAISCLLKCITCLSCARD 435
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
G+ AHG+++K GF ++ V N LI YA+ + + VF+ M +D ++WNS+I+
Sbjct: 436 GLV--AHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGC 493
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
+ NGL +EA+++F +M + ++VTL +VL A A G+ +H +K L
Sbjct: 494 SSNGLNSEAIELFIRMWTQGQ-ELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGE 552
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
+ +++DMY C + F M +KNV SWTAMI Y + L +M+
Sbjct: 553 TSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVL 612
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
G+RP+ S L A + +++G H + I G+E LL A L
Sbjct: 613 DGIRPDVFAVTSALHAFAGDESLKQG-----KSVHGYTIRNGME------KLLPVANALM 661
Query: 445 EAY---------DLIEGMKVKADFVVWGSLLGA-CRIHKNVDLGEIAAKKLFELEPNNCG 494
E Y LI D + W +L+G R + + + + L + PN
Sbjct: 662 EMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQFRPNA-- 719
Query: 495 YHVLLSNIYANAGRWEDVERTRSL 518
V ++ I A +ER R +
Sbjct: 720 --VTMTCILPAAASISSLERGREI 741
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 235/661 (35%), Positives = 356/661 (53%), Gaps = 69/661 (10%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ F+++ + ARGG V R + +L P S P ++
Sbjct: 100 PPDAFTFHFLFKCCARGGAHVLLGRMLHAACFRTLLP--SAVPLIASPIIHMYAELGLPG 157
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
++AF +DV + +I +K G L DAR+L P +RN+V+WT +++GY +
Sbjct: 158 DARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAP--VRNVVTWTGLISGYSRA 215
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
A EA+ F L SD + D V + +LSAC ++ H V
Sbjct: 216 GRAAEAVDCFNSML------------SDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLV 263
Query: 215 ---------------------------IKRGFDSEVGVG------NTLIDAYARGGHVDV 241
+ FD+ +G G N +ID Y + GHVD+
Sbjct: 264 GDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDA-LGRGRGPQPWNAMIDGYCKVGHVDI 322
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+R +FD M + D +T+NS+I Y G EAL +F +M + + + T+ +L A A
Sbjct: 323 ARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKM-RRHGLGADNFTMVGLLTASA 381
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
LG L G+ +H + + +E V +GT+++DMY KCG+V+ A AF QM ++V +W+A
Sbjct: 382 SLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSA 441
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MI G + + AL+ F+ M G N +T+++VL+ACSH+ L+ EG + + M
Sbjct: 442 MIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLH 501
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
NI P +EHYGCM+DLLGR+G L EA DL++ M ++ + V+W S+L ACR+HKNVDL + A
Sbjct: 502 NIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNA 561
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
A L +LEP +V + NIY ++ +WED + R LM+ R + KT G+S + + G+VH
Sbjct: 562 AHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHK 621
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
F+VGD+ HPQ +I +EE+ +L+ GY + + DVD+EEKE L HSEKLA
Sbjct: 622 FIVGDRSHPQIAEIVVMMEEIGRRLKSAGYSPITSQITVDVDEEEKEQALLAHSEKLAIA 681
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
NLRVC DCH+ I+LIS++ +REI+VRD RFH+F+ G+CSC D+
Sbjct: 682 FGLVSLAPNLPVHIIKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFRGGVCSCNDF 741
Query: 644 W 644
W
Sbjct: 742 W 742
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 119/243 (48%), Gaps = 27/243 (11%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+LF++ D ++V ++NS+I GG EAL F+ MR+ L T + + ++L
Sbjct: 325 SLFDQMED-HDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASL 383
Query: 87 HDLHSGKQAH---QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
L G+ H +Q + RDV++ +AL+DMY KCG + +A F ++ +R++ +
Sbjct: 384 GALPQGRALHACIEQRLV---ERDVYLGTALLDMYMKCGRVEEAMVAFKQM--SVRDVHT 438
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W++M+ G N + AL F F + +C G N SV +VL+ACS +
Sbjct: 439 WSAMIGGLAFNGMGKAALEHF--FWM---KCDGFHAN-------SVTYIAVLTACSHSCL 486
Query: 204 NGVTEGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNS 259
+ EG F R ++ +ID R G +D + + M ++ +AV W S
Sbjct: 487 --LDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWAS 544
Query: 260 IIA 262
I++
Sbjct: 545 ILS 547
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 34/197 (17%)
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
H+ + +FD M + ++ A + + + ++ +M DV +A T +
Sbjct: 52 HLRYALSLFDRMPCSTFLFDTALRACFRASSGPDRPIILYRRM-HGVDVPPDAFTFHFLF 110
Query: 298 LAIAHLGV-LRLGKCIHDQVIKMDLEESV-IVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
A G + LG+ +H + L +V ++ + II MY + G AR+AF++ K+
Sbjct: 111 KCCARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKD 170
Query: 356 VRSWT-------------------------------AMIAGYGMHCRAREALDLFYKMIK 384
V +WT +I+GY RA EA+D F M+
Sbjct: 171 VVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLS 230
Query: 385 AGVRPNYITFVSVLSAC 401
G+ P+ +T + +LSAC
Sbjct: 231 DGIAPDEVTVIGMLSAC 247
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/564 (39%), Positives = 334/564 (59%), Gaps = 34/564 (6%)
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+S L M K G+L +A++LF +IP+ + VS+ +ML+ YV+N N A F++ ++
Sbjct: 10 NSVLAGMSKKRGKLKEAQELFVKIPEP--DAVSYNTMLSCYVRNSNMERAQAFFEDMPIK 67
Query: 171 ESECGGA--SENSDNVFVDSVA-IASVLSACSRVTVNGVTEG---------AHGFVIKRG 218
++ + + N +D + ++ + VT N + G A K
Sbjct: 68 DTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAP 127
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
F S V +I Y + G + ++ ++F+ M EK+ VTWN++IA Y +N A + + +F
Sbjct: 128 FKSVVA-WTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFR 186
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
MV ++ N+ TLS+ LL + L L+LG+ +H V K L + GTS+I MYCKC
Sbjct: 187 TMV-GFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKC 245
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G ++ K F Q+ ++V +W AMI+GY H ++AL LF +MI+ G++P++ITFV+VL
Sbjct: 246 GVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVL 305
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
AC+HAG G + ++M ++ + +HY CMVDLLGRAGKL EA DLIE M K
Sbjct: 306 MACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPH 365
Query: 459 FVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSL 518
V+G+LLGACRIHKN ++ E A++KL L+P + +V L+N+YA RW+ V R R
Sbjct: 366 AAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKS 425
Query: 519 MKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSV 578
MK+ ++ KTPG+S +E++ H F GDK HP+ I+ L+EL K++ GYV D+
Sbjct: 426 MKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAGYVPDLEFA 485
Query: 579 IHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
+HDV +E+KE L HSEKLA NLRVCGDCH I+ IS++ R
Sbjct: 486 LHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDCHRAIKYISQIERR 545
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
EI+VRD+ RFH+FKDG CSC DYW
Sbjct: 546 EIIVRDTTRFHHFKDGHCSCADYW 569
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 159/355 (44%), Gaps = 51/355 (14%)
Query: 40 SWNSVIADLARG-GDSVEALRAFSSMRKLSLTPTRSTFPC-----------------AIK 81
+WNSV+A +++ G EA F + + + C IK
Sbjct: 8 TWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIK 67
Query: 82 SCSALHDLHSGKQAHQQA------FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
+ + + +G +QQ F+ ++V +A+I Y +CG+L A KLF++ P
Sbjct: 68 DTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAP 127
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLF-----KEFLLEESECGGASEN---SDNVFV- 186
+++V+WT+M+TGY++ A LF K + + G EN D V +
Sbjct: 128 --FKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLF 185
Query: 187 ----------DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
+S ++S L CS ++ + H V K + G +LI Y +
Sbjct: 186 RTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKC 245
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G ++ K+F + +D VTWN++I+ YAQ+G +AL +FD+M++ +K + +T AV
Sbjct: 246 GVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEK-GMKPDWITFVAV 304
Query: 297 LLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ----VDLARK 346
L+A H G LG K H L T ++D+ + G+ VDL K
Sbjct: 305 LMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEK 359
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF K +KN V +WN++IA + + ++ F +M + P ST A+ CS L
Sbjct: 153 LFEKMPEKNLV-TWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELS 211
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+Q HQ D ++LI MY KCG L D KLF ++P+ R++V+W +M
Sbjct: 212 ALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPR--RDVVTWNAM 269
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++GY Q+ ++AL LF E + + D + +VL AC+
Sbjct: 270 ISGYAQHGEGKKALGLFDEMI------------EKGMKPDWITFVAVLMACN 309
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 88/220 (40%), Gaps = 62/220 (28%)
Query: 249 MIEKDAVTWNSIIA-IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
M K VTWNS++A + + G EA ++F ++ + V N + LS + + + R
Sbjct: 1 MTLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTM-LSCY---VRNSNMER 56
Query: 308 LGKCIHDQVIK-----------------MD---------LEESVIVGTSIIDMYCKCGQV 341
D IK MD ++V+ ++I Y +CG +
Sbjct: 57 AQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDL 116
Query: 342 D-------------------------------LARKAFNQMKEKNVRSWTAMIAGYGMHC 370
D LA + F +M EKN+ +W AMIAGY +
Sbjct: 117 DSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENH 176
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
RA + + LF M+ G++PN T S L CS +Q G
Sbjct: 177 RAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLG 216
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V + +V +WN++I+ A+ G+ +AL F M + + P TF + +C+ H+G
Sbjct: 258 VPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACN-----HAG 312
Query: 93 ------KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
K H A +G + ++D+ + G+L +A L +++P
Sbjct: 313 FTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMP 361
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/439 (45%), Positives = 282/439 (64%), Gaps = 21/439 (4%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD--QMVKST 284
N++I+A + G VD++R +F M E++ ++W+ +I Y + G EAL +F QM+
Sbjct: 134 NSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVN 193
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
DV+ N T+S VL A LG L GK H + K + V++GT++IDMY KCG V+ A
Sbjct: 194 DVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKA 253
Query: 345 RKAFNQM-KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
F+ + K+V +W+AMI+G MH A E + LF KMI GVRPN +TF++V AC H
Sbjct: 254 TWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVH 313
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWG 463
GLV EG +L M +++I P ++HYGCMVDL GRAG++KEA+++++ M ++ D +VWG
Sbjct: 314 GGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWG 373
Query: 464 SLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRR 523
+LL R+H +++ E+A KKL ELEP N G +VLLSN+YA GRWEDV R LM+
Sbjct: 374 ALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMG 433
Query: 524 LAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVD 583
+ K PG SL+E+ G +H F VGD HP+ +I+ LEE+ +L+ GYV + V+ D+D
Sbjct: 434 IKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLD 493
Query: 584 QEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVR 625
+E KE+ L +HSEKLA NLR+C DCH I++ISKV DREI+VR
Sbjct: 494 EEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVR 553
Query: 626 DSKRFHYFKDGLCSCGDYW 644
D RFH+F GLCSC DYW
Sbjct: 554 DCNRFHHFTQGLCSCRDYW 572
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 180/371 (48%), Gaps = 53/371 (14%)
Query: 39 FSWNSVI-----ADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
F WN++I A G + + F MR + P TFP ++S ++ LH G+
Sbjct: 25 FLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGR 84
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ----------------- 136
H Q FG D FV ++LI MYS CG L AR++FDEIPQ
Sbjct: 85 SVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAG 144
Query: 137 ------------RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
RN++SW+ M+ GYV+ +EAL LF+E + G ++ N
Sbjct: 145 LVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREM-----QMLGVNDVRPNE 199
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
F ++ VL+AC R+ + AH ++ K G +V +G LID YA+ G V+ +
Sbjct: 200 F----TMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATW 255
Query: 245 VFDGM-IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VF + KD + W+++I+ A +GLA E + +F +M+ V+ NAVT AV A H
Sbjct: 256 VFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQ-GVRPNAVTFLAVFCACVHG 314
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTS----IIDMYCKCGQVDLARKAFNQMK-EKNVRS 358
G++ GK D + +M + S+I ++D+Y + G++ A M E +V
Sbjct: 315 GLVSEGK---DYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLV 371
Query: 359 WTAMIAGYGMH 369
W A+++G MH
Sbjct: 372 WGALLSGSRMH 382
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 40/246 (16%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT---PTRSTFPCAIKSCSALHDL 89
+ + NV SW+ +I R G EAL F M+ L + P T + +C L L
Sbjct: 156 MPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGAL 215
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
GK AH G DV + +ALIDMY+KCG + A +F + +++++W++M++
Sbjct: 216 EHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPN-KDVMAWSAMIS 274
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
G + A E + LF + + + V ++V +V AC
Sbjct: 275 GLAMHGLAEECVGLFSKMI------------NQGVRPNAVTFLAVFCAC----------- 311
Query: 210 AHGFVIKRGFD------------SEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVT 256
HG ++ G D + ++D Y R G + + V M +E D +
Sbjct: 312 VHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLV 371
Query: 257 WNSIIA 262
W ++++
Sbjct: 372 WGALLS 377
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/579 (37%), Positives = 337/579 (58%), Gaps = 24/579 (4%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L+ S++S+++ K + ++F+ + NVF++N++I+ G E +
Sbjct: 69 LNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQ 128
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
MR + P + TFPCAIK+C D+ K+ H F FG DVF+ SAL++ Y K G
Sbjct: 129 KMRNEGVIPDKFTFPCAIKACL---DVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFG 185
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+ A+ F+E+P IR++V W +M+ GY Q L F+ N +
Sbjct: 186 LMEHAQVAFEELP--IRDVVLWNAMVNGYAQIGQFEMVLETFRRM------------NDE 231
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
+V + VLS + + HGF +K G+DS V V N+LID Y + ++ +
Sbjct: 232 SVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDA 291
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
++F+ M EKD +WNSI++++ Q G L + D+M+ + ++ + VT++ VL A +H
Sbjct: 292 LEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGA-GIQPDLVTVTTVLPACSH 350
Query: 303 LGVLRLGKCIHDQVIKMDLE------ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L L G+ IH +I L + V++ ++IDMY KCG + A F +M K+V
Sbjct: 351 LAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDV 410
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW MI GYGMH EAL++F +M + ++P+ +TFV VLSACSHAG V +G ++L
Sbjct: 411 ASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQ 470
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M ++++ P +EHY C++D+LGRAG+L EAY+L M ++A+ VVW +LL ACR+HK+
Sbjct: 471 MKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAV 530
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
L E+AA+++FELEP +CG +VL+SN+Y GR+E+V R M+ + + KTPG S +EL+
Sbjct: 531 LAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELK 590
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
VH F+ D+ HP+ IY L L +L+E GYV D+
Sbjct: 591 NGVHVFVSADRAHPEAHSIYAGLNSLTARLREHGYVPDV 629
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 199/408 (48%), Gaps = 24/408 (5%)
Query: 71 PTRSTFPCAIKSCSALH-DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P T A SA H +L GK+ H I GF ++LI+MYSKC +++ A
Sbjct: 34 PYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALS 93
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F + P N+ ++ ++++G++ N E +++ ++ V D
Sbjct: 94 IFSD-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKM------------RNEGVIPDKF 140
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
+ AC V + HG + K G + +V +G+ L++ Y + G ++ ++ F+ +
Sbjct: 141 TFPCAIKACLDVL---EIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 197
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+D V WN+++ YAQ G L+ F +M + V + T++ VL A +G L G
Sbjct: 198 PIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVP-SRFTVTGVLSVFAVMGDLNNG 256
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
+ IH +KM + V V S+IDMY KC ++ A + F M+EK++ SW ++++ +
Sbjct: 257 RIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQC 316
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSH-AGLVQ----EGWHWLNTMGHEFNIE 424
L L +M+ AG++P+ +T +VL ACSH A L+ G+ ++ +G +
Sbjct: 317 GDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDI 376
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
V ++D+ + G +++A+ + E M K D W ++ +H
Sbjct: 377 DDVLLKNAVIDMYAKCGSMRDAHLVFERMSNK-DVASWNIMIMGYGMH 423
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 6/187 (3%)
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
++S N T A L A AH L GK IH ++ S + TS+I+MY KC Q
Sbjct: 28 IQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQ 87
Query: 341 VDLARKAF-NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
++ A F + E NV ++ A+I+G+ + E + + KM GV P+ TF +
Sbjct: 88 MNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIK 147
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
AC +++ L G E ++ G C + + G ++ A E + ++ D
Sbjct: 148 ACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYL----KFGLMEHAQVAFEELPIR-DV 202
Query: 460 VVWGSLL 466
V+W +++
Sbjct: 203 VLWNAMV 209
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 231/593 (38%), Positives = 346/593 (58%), Gaps = 37/593 (6%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P + +++ L LH Q H + G+ F+ + L+++ G +S R++
Sbjct: 10 PHSPAYNLLLQAGPRLKLLH---QVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQI 66
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDN-AREALLLFKEFLLEESECGGASENSDNVFVDSV 189
F +P + +TS++ + N + +L + +L NV +
Sbjct: 67 FLIVPNP--DSFLFTSLIRSTSKFHNFSVYSLYFYTRMVL------------SNVAPSNY 112
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
SV+ +C+ + HG V+ GF S+V V L+ Y + G + +RKVFD M
Sbjct: 113 TFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKM 172
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
++ VTWNS+I+ Y QNG A EA+ +FD+M K V+ N+ T +VL A AHLG LG
Sbjct: 173 RDRSVVTWNSMISGYEQNGFAKEAIRLFDRM-KEIGVEPNSATFVSVLSACAHLGAFILG 231
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
+H+ + L+ +V++GTS+I+MY +CG V AR+ F+ MKE+NV +WTAMI+GYG +
Sbjct: 232 CWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTN 291
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
+A++LF++M + G+ PN ITFV+VLSAC+HAGLV EG +M E+ + P VEH
Sbjct: 292 GYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEH 351
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
+ C+VD+LGRAG L EAY+ I+ + + +W ++LGAC++HKN LG A+ E
Sbjct: 352 HVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASE 411
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
P N ++V+LSNIYA AGR + VE R M + L K G+S ++L K + F +GDK H
Sbjct: 412 PGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLFSMGDKSH 471
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
+ +IY YL++L K +E GYVT SV+H++++EE+E L HSEKLA
Sbjct: 472 TETNEIYHYLDQLMRKCREAGYVTVSDSVMHELEEEEREYALGYHSEKLAIAFGLLKTSR 531
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH+ I+ IS + +REI+VRD RFH+FK+G CSC DYW
Sbjct: 532 GTVIRIVKNLRMCEDCHSAIKYISVISNREIIVRDKLRFHHFKNGSCSCLDYW 584
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 183/340 (53%), Gaps = 18/340 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGD-SVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS 91
V + F + S+I ++ + SV +L ++ M ++ P+ TF IKSC+ L L
Sbjct: 70 VPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRH 129
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ H + GF DV+V +AL+ Y KCG L +ARK+FD++ R R++V+W SM++GY
Sbjct: 130 GRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKM--RDRSVVTWNSMISGY 187
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
QN A+EA+ LF E G V +S SVLSAC+ + + H
Sbjct: 188 EQNGFAKEAIRLFDRM----KEIG--------VEPNSATFVSVLSACAHLGAFILGCWVH 235
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+ + G D V +G +LI+ Y R G+V +R+VFD M E++ V W ++I+ Y NG +
Sbjct: 236 EYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGS 295
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESVIVGTS 330
+A+++F +M + + N++T AVL A AH G++ G+ + + + + L V
Sbjct: 296 QAVELFHEM-RRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVC 354
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
++DM + G +D A ++ E+ + WTAM+ MH
Sbjct: 355 LVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMH 394
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 163/337 (48%), Gaps = 31/337 (9%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N +F+K D++ V +WNS+I+ + G + EA+R F M+++ + P +TF + +C
Sbjct: 164 NARKVFDKMRDRS-VVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSAC 222
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ L G H+ A G +V + ++LI+MY++CG +S AR++FD + + RN+V+
Sbjct: 223 AHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKE--RNVVA 280
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
WT+M++GY N +A+ LF E + + +S+ +VLSAC+ +
Sbjct: 281 WTAMISGYGTNGYGSQAVELFHEM------------RRNGLLPNSITFVAVLSACAHAGL 328
Query: 204 NGVTEGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA-VTWNS 259
V EG F R EV L+D R G +D + + E+ A W +
Sbjct: 329 --VNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTA 386
Query: 260 IIA---IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
++ ++ GL A+ + ++ + V LS + A+A G + + + D +
Sbjct: 387 MLGACKMHKNFGLGAQVAE--HRLASEPGNPAHYVILSNI-YALA--GRMDQVEMVRDNM 441
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
I+ L++ VG S ID+ K + K+ + E
Sbjct: 442 IRKCLKKQ--VGYSTIDLDRKTYLFSMGDKSHTETNE 476
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/607 (36%), Positives = 334/607 (55%), Gaps = 70/607 (11%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL--FDEIPQRIRNIVSWTSMLTG 150
KQ H + + G + +V + LI +K D L F+++ N + +++ G
Sbjct: 63 KQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQV--NYPNPFLYNALIRG 120
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y+ + +E+ + + V S ++ AC G+
Sbjct: 121 YLIEERLKESTEFYSLM------------RKEGVVPVSFTFTALFKACGAKMDVGLGRQI 168
Query: 211 HG-FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY----- 264
HG ++ GF ++ VGN++ID Y + G ++ RKVFD M +D ++W +I+ Y
Sbjct: 169 HGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGN 228
Query: 265 --------------------------AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
AQN EA+ F++M + V+ + +TL V+
Sbjct: 229 MESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKM-QEFGVETDEITLIGVIS 287
Query: 299 AIAHLGVLRLGKCIHDQVIKMDL--EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
A A LG + I D K + + SV+VG+++IDMY KCG V A + F MKE+NV
Sbjct: 288 ACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNV 347
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
S+++MI G+ MH R +A+ LF +M+K ++PN +TF+ VL+ACSHAG+V++GW
Sbjct: 348 YSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFEL 407
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M + I+P +HY CMVDLLGRAG+L+EA++L++ M ++ VWG+LLGACRIHK+ D
Sbjct: 408 MEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPD 467
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVEL- 535
+ IAA LFELEP G ++LL+NIYA+ GRW DV R LM+ R L K P FS +E
Sbjct: 468 IAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESE 527
Query: 536 RGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHS 595
+G VH F GD HP+ +I + LE+L +L+ GY ++SV +DV+ E+K L HS
Sbjct: 528 KGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHS 587
Query: 596 EKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGL 637
EKLA NLR+C DCH+VI S++ REI+VRD RFH+F DG+
Sbjct: 588 EKLALAFGLISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRFHHFHDGI 647
Query: 638 CSCGDYW 644
CSCG++W
Sbjct: 648 CSCGNFW 654
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 229/482 (47%), Gaps = 71/482 (14%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++FN+ V+ N F +N++I E+ +S MRK + P TF K+C A
Sbjct: 101 SIFNQ-VNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAK 159
Query: 87 HDLHSGKQAHQQAFIF-GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR-------- 137
D+ G+Q H Q + GF D+ V +++IDMY KCG L RK+FDE+P R
Sbjct: 160 MDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTEL 219
Query: 138 ---------------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
++++V+WT M++G+ QN REA++ F++ E G
Sbjct: 220 ISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKM----QEFG- 274
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE--VGVGNTLIDAYA 234
V D + + V+SAC+++ + K F + V VG+ LID Y+
Sbjct: 275 -------VETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYS 327
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
+ G V + +VF GM E++ +++S+I +A +G +A+ +FD+MVK T++K N VT
Sbjct: 328 KCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVK-TEIKPNRVTFI 386
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK- 352
VL A +H G++ G I + + K ++ S T ++D+ + G++ A + M
Sbjct: 387 GVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPI 446
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG----VRP----NYITFVSVLSACSHA 404
E + W A++ CR ++ D+ I A + P NYI ++ ++C
Sbjct: 447 EPHGGVWGALLGA----CRIHKSPDI--AAIAANHLFELEPYCIGNYILLANIYASCGRW 500
Query: 405 GLVQEGWHWLNTMGHEFNI-------EPGVEHYGCMVDLL-GRAGKLKEAY-DLIEGMKV 455
V + T G N E G+ H D+ R+G++K+A DL++ ++
Sbjct: 501 NDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEA 560
Query: 456 KA 457
K
Sbjct: 561 KG 562
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/611 (38%), Positives = 337/611 (55%), Gaps = 73/611 (11%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
N + L + +++ N F WN++I + V A+ + M + P TFP +K
Sbjct: 81 NLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLK 140
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS---------------- 125
SC+ + GKQ H G D FV ++LI+MY++ GEL
Sbjct: 141 SCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVS 200
Query: 126 ---------------DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
DAR+LF+EIP +R+ VSW +M+ GY Q+ EAL F+E
Sbjct: 201 FTALITGYTLRGCLDDARRLFEEIP--VRDAVSWNAMIAGYAQSGRFEEALAFFQEM--- 255
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI 230
NV + + +VLSAC++ + ++ G S + + N LI
Sbjct: 256 ---------KRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALI 306
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
D Y++ G +D +R +F+G+ EKD ++WN +I Y+ EAL +F +M +S +V+ N
Sbjct: 307 DMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQS-NVEPND 365
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE-ESVIVGTSIIDMYCKCGQVDLARKAFN 349
VT ++L A A+LG L LGK IH + K L + + TS+IDMY KCG ++ A++ F
Sbjct: 366 VTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFA 425
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
MK K++ SW AMI+G MH A AL+LF +M G P+ ITFV VLSACSHAGLV+
Sbjct: 426 GMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVEL 485
Query: 410 GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
G ++M +++I P ++HYGCM+DLLGRAG EA L++ M++K D +WGSLLGAC
Sbjct: 486 GRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGAC 545
Query: 470 RIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPG 529
R+H NV+LGE AAK LFELEP N G +VLLSNIYA AGRW+DV R R+ + ++ + K
Sbjct: 546 RVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKX-- 603
Query: 530 FSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE-VGYVTDMTSVIHDVDQEEKE 588
+ IY+ L+E++ E G V D + V++D+D+E KE
Sbjct: 604 -----------------------QDIYKMLDEIDQSFGERPGXVPDTSEVLYDMDEEWKE 640
Query: 589 MTLRIHSEKLA 599
+L HSEKLA
Sbjct: 641 GSLSHHSEKLA 651
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 217/457 (47%), Gaps = 56/457 (12%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSDARKLFDEIPQR 137
+ +C + +L KQ H Q G H F S LI+ S G LS A LF+ I Q
Sbjct: 39 LSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ- 94
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
N W +M+ G + + A+ + LL CG V +S +L +
Sbjct: 95 -PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLL----CG--------VEPNSYTFPFLLKS 141
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH------------------- 238
C++V + HG V+K G +S+ V +LI+ YA+ G
Sbjct: 142 CAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSF 201
Query: 239 ------------VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
+D +R++F+ + +DAV+WN++IA YAQ+G EAL F +M K +V
Sbjct: 202 TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEM-KRANV 260
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
N T+ VL A A G L LG + + L ++ + ++IDMY KCG +D AR
Sbjct: 261 APNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARD 320
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F + EK++ SW MI GY +EAL LF KM ++ V PN +TFVS+L AC++ G
Sbjct: 321 LFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGA 380
Query: 407 VQEGWHWLNT-MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
+ G W++ + +F + ++D+ + G ++ A + GMK K+ W ++
Sbjct: 381 LDLG-KWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKS-LGSWNAM 438
Query: 466 LGACRIHKNVDLGEIAAKKLFE--LEPNNCGYHVLLS 500
+ +H + ++ +++ + EP++ + +LS
Sbjct: 439 ISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLS 475
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 17/224 (7%)
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYC---KCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
K IH Q+IK L + + +I+ +C G + A F +++ N W MI G
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIE-FCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGN 107
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH--EFNIE 424
+ A+D + +M+ GV PN TF +L +C+ G QEG GH + +E
Sbjct: 108 SLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEG---KQIHGHVLKLGLE 164
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
+ ++++ + G+L A +L+ D V + +L+ + +D A++
Sbjct: 165 SDPFVHTSLINMYAQNGELGYA-ELVFSKSSLRDAVSFTALITGYTLRGCLD----DARR 219
Query: 485 LFELEP--NNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
LFE P + ++ +++ YA +GR+E+ MK +A
Sbjct: 220 LFEEIPVRDAVSWNAMIAG-YAQSGRFEEALAFFQEMKRANVAP 262
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/476 (42%), Positives = 296/476 (62%), Gaps = 21/476 (4%)
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D VL AC+R+ H + K GFDS+V V N LI Y G +D + K F
Sbjct: 86 DHFTFPFVLKACARLQTG---LDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKAF 142
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ M E+D V+W+S+IA +A+NG EAL +F +M VK + V + +V+ AI+ LG L
Sbjct: 143 EEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDL 202
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
LGK I + + LE +V +GT+++DM+ +CG ++ + + F++M E+NV +WTA+I G
Sbjct: 203 ELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGL 262
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+H R+ EAL +FY+M G +P+++TF VL ACSH GLV EGWH ++ +E+ +EP
Sbjct: 263 AVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPL 322
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
EHYGCMVDLLGRAG L EA ++GM ++ + ++W +LLGAC H ++L E +K+
Sbjct: 323 PEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKIN 382
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
EL+ + G +VLLSN+Y GRW + R+ M+ +R++K PG SL+ + +H F+ GD
Sbjct: 383 ELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGD 442
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
HPQ E I E+L + L+ VGY D+++V+ D+++EEKE TL HSEKLA
Sbjct: 443 NNHPQFESIREFLVSMIDSLKVVGYTPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLC 502
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH ++ S V +REI++RD RFH+F G CSC DYW
Sbjct: 503 FKDSRTIRVMKNLRICHDCHCFMKYASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 133/246 (54%), Gaps = 17/246 (6%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M ++P TFP +K+C+ L +G H F GF DV+V + LI Y CG
Sbjct: 78 MTMAGVSPDHFTFPFVLKACARLQ---TGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGF 134
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
L A K F+E+P+ R++VSW+SM+ + +N EAL LF+ L
Sbjct: 135 LDFALKAFEEMPE--RDLVSWSSMIACFAKNGFGYEALALFQRMQL-----------VGT 181
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V D V + SV+SA S + + + GF+ + G + V +G L+D ++R G ++ S
Sbjct: 182 VKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESM 241
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+VFD M E++ +TW ++I A +G +AEAL +F +M ++ + + VT + VL+A +H
Sbjct: 242 RVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEM-RNHGFQPDHVTFTGVLVACSHG 300
Query: 304 GVLRLG 309
G++ G
Sbjct: 301 GLVSEG 306
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 113/235 (48%), Gaps = 21/235 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-SLTPTRSTFPCAIKSCSALHDLHS 91
+ + ++ SW+S+IA A+ G EAL F M+ + ++ P + + S L DL
Sbjct: 145 MPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLEL 204
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
GK G V + +AL+DM+S+CG + ++ ++FDE+ + RN+++WT+++ G
Sbjct: 205 GKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGE--RNVLTWTALINGL 262
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+ + EAL +F E + D V VL ACS + V+EG H
Sbjct: 263 AVHGRSAEALRMFYEM------------RNHGFQPDHVTFTGVLVACSHGGL--VSEGWH 308
Query: 212 GFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
F R G + ++D R G ++ + K DGM I +++ W +++
Sbjct: 309 VFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLG 363
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 14/128 (10%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ NV +W ++I LA G S EALR F MR P TF + +CS G
Sbjct: 249 ERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACS------HGGL 302
Query: 95 AHQQAFIFGFHRDVFVSSAL-------IDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ +F R+ + L +D+ + G L++A K D +P R +I+ W ++
Sbjct: 303 VSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSII-WRTL 361
Query: 148 LTGYVQND 155
L V ++
Sbjct: 362 LGACVNHN 369
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/616 (36%), Positives = 339/616 (55%), Gaps = 94/616 (15%)
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQR-----------------------------IR 139
VS+ +I MY + G DAR+ FD+IP + R
Sbjct: 141 LVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPAR 200
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N++SWT +++GY + A EA+ F L SD + D V + +LSAC+
Sbjct: 201 NVISWTGLISGYSRAGRAAEAVDCFNSML------------SDGIEPDEVTVIGLLSACA 248
Query: 200 RVTVNGVTEGAHGFVIKRG---------------------------FDSEVGVG------ 226
++ H V ++G FD+ +G G
Sbjct: 249 QLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDA-LGRGRRPQSW 307
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N +ID Y + GHVDV+R +FD M ++D VT+NS+I Y G EAL +F QM + D+
Sbjct: 308 NAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQM-RRHDL 366
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+ + T+ ++L A A LG L G+ +H + + +E + +GT+++DMY KCG+V+ A
Sbjct: 367 RADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASL 426
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F M ++V +W+AMIAG + + AL+ F+ M G +PN +T++++L+ACSH+ L
Sbjct: 427 VFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCL 486
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ EG + M NI P +EHYGCM+DLLGR+G L EA DL+ M ++ + V+W S+L
Sbjct: 487 LDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASIL 546
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
ACR+HK+ +L AA+ L +LEP+ +V L NIY ++ +WED + R LM+ R + K
Sbjct: 547 SACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKK 606
Query: 527 TPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
G+S + + G+VH F+V D+ HPQ +I +EE+ +L+ VGY + + DVD+EE
Sbjct: 607 AAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEE 666
Query: 587 KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSK 628
KE L HSEK+A NLRVC DCH+ I+LIS++ +REI+VRD
Sbjct: 667 KEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRS 726
Query: 629 RFHYFKDGLCSCGDYW 644
RFH+F+DG CSC D+W
Sbjct: 727 RFHHFRDGTCSCNDFW 742
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 171/371 (46%), Gaps = 45/371 (12%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
++ NV SW +I+ +R G + EA+ F+SM + P T + +C+ L DL
Sbjct: 195 RHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLV 254
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI-----PQRI------- 138
G+ H+ G + ALIDMY+KCG++ A ++FD + PQ
Sbjct: 255 FGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGY 314
Query: 139 ------------------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
R++V++ S++TGY+ REALLLF +
Sbjct: 315 CKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQM------------R 362
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
++ D+ + S+L+AC+ + H + +R + ++ +G L+D Y + G V+
Sbjct: 363 RHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVE 422
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+ VF M +D TW+++IA A NG+ AL+ F M K + N+VT A+L A
Sbjct: 423 EASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWM-KVDGFQPNSVTYIAILTAC 481
Query: 301 AHLGVLRLGKCIHDQV-IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRS 358
+H +L G+ +++ + ++ + +ID+ + G +D A M + N
Sbjct: 482 SHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVI 541
Query: 359 WTAMIAGYGMH 369
W ++++ +H
Sbjct: 542 WASILSACRVH 552
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 21/239 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ D++ V ++NS+I GG EAL F MR+ L T + +C++L
Sbjct: 326 LFDQMEDRDLV-TFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLG 384
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+ H D+++ +AL+DMY KCG + +A +F + +R++ +W++M
Sbjct: 385 ALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAM--SVRDVHTWSAM 442
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G N + AL F F ++ D +SV ++L+ACS + +
Sbjct: 443 IAGLAFNGMGKAALEYF--FWMK----------VDGFQPNSVTYIAILTACSHSCL--LD 488
Query: 208 EGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
EG F R + +ID R G +D + + M ++ +AV W SI++
Sbjct: 489 EGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILS 547
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 122/293 (41%), Gaps = 41/293 (13%)
Query: 308 LGKCIHDQVIKMDLEESV-IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT------ 360
L + +H + L +V +V II MY + G AR+AF+ + K+ +WT
Sbjct: 122 LCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGL 181
Query: 361 -------------------------AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
+I+GY RA EA+D F M+ G+ P+ +T +
Sbjct: 182 AKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVI 241
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
+LSAC+ + G +G + + G + ++D+ + G + A+++ + +
Sbjct: 242 GLLSACAQLKDLVFGRSLHKLVGEKGMLMSG-KLVVALIDMYAKCGDIGRAWEVFDALGR 300
Query: 456 KADFVVWGSLL-GACRIHKNVDLGEIAAKKLF-ELEPNNCGYHVLLSNIYANAGRWEDVE 513
W +++ G C++ +VD+ A+ LF ++E + L Y + GR +
Sbjct: 301 GRRPQSWNAMIDGYCKL-GHVDV----ARYLFDQMEDRDLVTFNSLITGYIHGGRLREAL 355
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
M+ L + F++V L + + H I + L E+++ L
Sbjct: 356 LLFMQMRRHDL-RADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYL 407
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/641 (35%), Positives = 357/641 (55%), Gaps = 50/641 (7%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
++F+W+S+IA AR G A+ + M + P TF CA+ C+++ L G+
Sbjct: 94 KDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAI 153
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
HQ+ +D + +L++MY KC E+ +ARK+F+ + + RN+ S+T+M++ YVQ
Sbjct: 154 HQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGM--KARNVRSYTAMISAYVQAG 211
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
EAL LF + + ++ A++L A + H +
Sbjct: 212 EHAEALELFSRM-----------SKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 260
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
RGFD+ V V N L+ Y + G +RKVFD M ++ ++W S+IA YAQ+G EAL+
Sbjct: 261 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 320
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F +M DV+ + V+ S+ L A A LG L G+ IH +V++ +L S + TS++ MY
Sbjct: 321 LFKRM----DVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLA-SPQMETSLLSMY 375
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
+CG +D AR+ FN+MK ++ S AMIA + H R ++AL ++ KM + G+ + ITFV
Sbjct: 376 ARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFV 435
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
SVL ACSH LV + +L ++ + + P VEHY CMVD+LGR+G+L +A +L+E M
Sbjct: 436 SVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPY 495
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
+AD V W +LL C+ H ++D GE AA+K+FEL P +V LSN+YA A R++D R
Sbjct: 496 QADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRV 555
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQH-------EKIYEYLEELNVKLQE 568
R M+ R + + S +E+ ++H F G ++ Q E++ L EL +++
Sbjct: 556 RKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLVELLEPMKQ 615
Query: 569 VGYVTDMTSVIHD----VDQEEKEMTLRIHSEKLA---------------------NLRV 603
GYV D V + +EEK+ +L HSE+LA + RV
Sbjct: 616 AGYVPDTREVYLEQQGVTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRV 675
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
C CH+ I+L+S + ++ I VRD RFH+F+ G CSCGD+W
Sbjct: 676 CSGCHSAIKLLSDITEKRIFVRDGSRFHHFEKGACSCGDHW 716
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 229/450 (50%), Gaps = 32/450 (7%)
Query: 44 VIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFG 103
+IA R G ++AL + M + + + + +C+ L L G++ H+ I G
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 104 FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
F D+ + +AL+ MY+KCG L DA+++F+ + I+++ +W+S++ Y + A++L
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGM--EIKDLFAWSSIIAAYARAGRGEMAVVL 118
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDS 221
++ + E E NV V A L C+ +V G+ +G H ++
Sbjct: 119 YRRMIAEGVE--------PNV----VTFACALGGCA--SVAGLADGRAIHQRILASKVPQ 164
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+ + ++L++ Y + + +RKVF+GM ++ ++ ++I+ Y Q G AEAL++F +M
Sbjct: 165 DDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMS 224
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
K ++ NA T + +L A+ LG L G+ +H + + +V+V +++ MY KCG
Sbjct: 225 KVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSP 284
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
ARK F+ M +NV SWT+MIA Y H +EAL+LF +M V P+ ++F S L+AC
Sbjct: 285 VEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNAC 341
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK----- 456
+ G + EG + + P +E ++ + R G L +A + MK +
Sbjct: 342 ALLGALDEGREIHHRVVEANLASPQME--TSLLSMYARCGSLDDARRVFNRMKTRDAFSC 399
Query: 457 ----ADFVVWGSLLGACRIHKNVDLGEIAA 482
A F G A RI++ ++ I A
Sbjct: 400 NAMIAAFTQHGRKKQALRIYRKMEQEGIPA 429
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/634 (35%), Positives = 356/634 (56%), Gaps = 42/634 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + ++ SWNS+I+ GD +L F M K P R + A+ +CS ++ G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 93 KQAHQQAFIFGFHR-DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K+ H A DV V ++++DMYSK GE+S A ++F+ + QR NIV+W M+ Y
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR--NIVAWNVMIGCY 308
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG-- 209
+N +A L F++ SE G + V+++ + + + + EG
Sbjct: 309 ARNGRVTDAFLCFQKM----SEQNGLQPD-------------VITSINLLPASAILEGRT 351
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG+ ++RGF + + LID Y G + + +FD M EK+ ++WNSIIA Y QNG
Sbjct: 352 IHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGK 411
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
AL++F ++ S+ V ++ T++++L A A L G+ IH ++K + I+
Sbjct: 412 NYSALELFQELWDSSLVP-DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILN 470
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
S++ MY CG ++ ARK FN + K+V SW ++I Y +H R ++ LF +MI + V P
Sbjct: 471 SLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNP 530
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
N TF S+L+ACS +G+V EGW + +M E+ I+PG+EHYGCM+DL+GR G A
Sbjct: 531 NKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRF 590
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
+E M +WGSLL A R HK++ + E AA+++F++E +N G +VLL N+YA AGRW
Sbjct: 591 LEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRW 650
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL-QE 568
EDV R + LM+++ +++T S VE +GK H F GD+ H KIYE L+ ++ + +E
Sbjct: 651 EDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEE 710
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
YV ++ + + + + + R HS +LA N R+C CH
Sbjct: 711 DIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEF 770
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ S++ REIVV DSK FH+F +G CSCG+YW
Sbjct: 771 LEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 245/489 (50%), Gaps = 50/489 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ ++K + F WN +I G +EA++ +S M + T+P IKS + +
Sbjct: 86 LFDE-MNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGIS 144
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK+ H GF DV+V ++LI +Y K G DA K+F+E+P+ R+IVSW SM
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE--RDIVSWNSM 202
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY+ + +L+LFKE L +CG D + S L ACS V +
Sbjct: 203 ISGYLALGDGFSSLMLFKEML----KCGFKP--------DRFSTMSALGACSHVYSPKMG 250
Query: 208 EGAHGFVIKRGFDS-EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H ++ ++ +V V +++D Y++ G V + ++F+GMI+++ V WN +I YA+
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG +A F +M + ++ + +T +L A A L G+ IH ++ ++
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMV 366
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
+ T++IDMY +CGQ+ A F++M EKNV SW ++IA Y + + AL+LF ++ +
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSS 426
Query: 387 VRPNYITFVSVLSACSHAGLVQEG----------WHWLNTMGHEFNIEPGVEHYGCMVDL 436
+ P+ T S+L A + + + EG +W NT+ +V +
Sbjct: 427 LVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI-----------ILNSLVHM 475
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL-----EPN 491
G L++A + +K D V W S++ A +H G I+ E+ PN
Sbjct: 476 YAMCGDLEDARKCFNHILLK-DVVSWNSIIMAYAVH---GFGRISVWLFSEMIASRVNPN 531
Query: 492 NCGYHVLLS 500
+ LL+
Sbjct: 532 KSTFASLLA 540
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 18/232 (7%)
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
++FD M + DA WN +I + GL EA+ + +MV + VK + T V+ ++A +
Sbjct: 85 QLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA-GVKADTFTYPFVIKSVAGI 143
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L GK IH VIK+ V V S+I +Y K G A K F +M E+++ SW +MI
Sbjct: 144 SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMI 203
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN- 422
+GY +L LF +M+K G +P+ + +S L ACSH + MG E +
Sbjct: 204 SGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV--------YSPKMGKEIHC 255
Query: 423 ------IEPG-VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
IE G V ++D+ + G++ A + GM ++ + V W ++G
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIG 306
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/579 (37%), Positives = 337/579 (58%), Gaps = 24/579 (4%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L+ S++S+++ K + ++F+ + NVF++N++I+ G E +
Sbjct: 69 LNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQ 128
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
MR + P + TFPCAIK+C D+ K+ H F FG DVF+ SAL++ Y K G
Sbjct: 129 KMRNEGVIPDKFTFPCAIKACL---DVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFG 185
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+ A+ F+E+P IR++V W +M+ GY Q L F+ N +
Sbjct: 186 LMEHAQVAFEELP--IRDVVLWNAMVNGYAQIGQFEMVLETFRRM------------NDE 231
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
+V + VLS + + HGF +K G+DS V V N+LID Y + ++ +
Sbjct: 232 SVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDA 291
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
++F+ M EKD +WNSI++++ Q G L + D+M+ + ++ + VT++ VL A +H
Sbjct: 292 LEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGA-GIQPDLVTVTTVLPACSH 350
Query: 303 LGVLRLGKCIHDQVIKMDLE------ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L L G+ IH +I L + V++ ++IDMY KCG + A F +M K+V
Sbjct: 351 LAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDV 410
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW MI GYGMH EAL++F +M + ++P+ +TFV VLSACSHAG V +G ++L
Sbjct: 411 ASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQ 470
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M ++++ P +EHY C++D+LGRAG+L EAY+L M ++A+ VVW +LL ACR+HK+
Sbjct: 471 MKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAV 530
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
L E+AA+++FELEP +CG +VL+SN+Y GR+E+V R M+ + + KTPG S +EL+
Sbjct: 531 LAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELK 590
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
VH F+ D+ HP+ IY L L +L+E GYV D+
Sbjct: 591 NGVHVFVSADRAHPEAHSIYAGLNSLTARLREHGYVPDV 629
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 199/408 (48%), Gaps = 24/408 (5%)
Query: 71 PTRSTFPCAIKSCSALH-DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P T A SA H +L GK+ H I GF ++LI+MYSKC +++ A
Sbjct: 34 PYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALS 93
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F + P N+ ++ ++++G++ N E +++ ++ V D
Sbjct: 94 IFSD-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKM------------RNEGVIPDKF 140
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
+ AC V + HG + K G + +V +G+ L++ Y + G ++ ++ F+ +
Sbjct: 141 TFPCAIKACLDVL---EIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 197
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+D V WN+++ YAQ G L+ F +M + V + T++ VL A +G L G
Sbjct: 198 PIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVP-SRFTVTGVLSVFAVMGDLNNG 256
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
+ IH +KM + V V S+IDMY KC ++ A + F M+EK++ SW ++++ +
Sbjct: 257 RIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQC 316
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSH-AGLVQ----EGWHWLNTMGHEFNIE 424
L L +M+ AG++P+ +T +VL ACSH A L+ G+ ++ +G +
Sbjct: 317 GDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDI 376
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
V ++D+ + G +++A+ + E M K D W ++ +H
Sbjct: 377 DDVLLKNAVIDMYAKCGSMRDAHLVFERMSNK-DVASWNIMIMGYGMH 423
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 6/187 (3%)
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
++S N T A L A AH L GK IH ++ S + TS+I+MY KC Q
Sbjct: 28 IQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQ 87
Query: 341 VDLARKAF-NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
++ A F + E NV ++ A+I+G+ + E + + KM GV P+ TF +
Sbjct: 88 MNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIK 147
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
AC +++ L G E ++ G +V+ + G ++ A E + ++ D
Sbjct: 148 ACLDVLEIKKIHGLLFKFGLELDVFIG----SALVNCYLKFGLMEHAQVAFEELPIR-DV 202
Query: 460 VVWGSLL 466
V+W +++
Sbjct: 203 VLWNAMV 209
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/566 (39%), Positives = 324/566 (57%), Gaps = 40/566 (7%)
Query: 104 FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
F D F+S+ LI+ Y+ G L AR++FDE P ++NI W ++L D+ EAL
Sbjct: 104 FRSDPFLSTRLIEAYAALGALPAARQVFDETP--VKNIFVWNALLKALALADHGDEALAR 161
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA-----HGFVIKRG 218
+ V VDS + L AC V+ + A H I+RG
Sbjct: 162 LADM------------GRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRG 209
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF- 277
+ V TLID YA+ G V + VF M E++ V+W+++I YA+N A+A+++F
Sbjct: 210 YALHTHVATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFK 269
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCK 337
D M D+ N++T+ +VL A A + L GK +H +++ + V V +++ MY +
Sbjct: 270 DMMASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMR 329
Query: 338 CGQVDLARKAFNQM-KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
CG +++ R F + ++V SW ++I+GYGMH EA+ +F +MI G P+ ITF+S
Sbjct: 330 CGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFIS 389
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VL ACSHAGLV EG +M E+ + P EHY CMVDLLGRAG+L EA +LI M ++
Sbjct: 390 VLGACSHAGLVNEGKMLFESMV-EYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIE 448
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
VWG+LLGACRIH +V+ EIA LF+LEP N G +VLL++IYA A V +
Sbjct: 449 PSPQVWGALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLK 508
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
L++ L K G S +E++ K+H+F D ++P E++ + E +++ GYV D
Sbjct: 509 ELLEEHALEKVTGCSWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTG 568
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V++D++ EEKE L HSEKLA NLR+C DCH+V + ISK
Sbjct: 569 IVLYDIEGEEKERILIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFT 628
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
+REIVVRD RFH+F+DG+CSCGDYW
Sbjct: 629 EREIVVRDVNRFHHFRDGVCSCGDYW 654
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 181/342 (52%), Gaps = 24/342 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG---- 92
N+F WN+++ LA EAL + M +L + ++ +K+C A+ H+
Sbjct: 138 NIFVWNALLKALALADHGDEALARLADMGRLGVPVDSYSYTHGLKACIAVSASHAPASAR 197
Query: 93 -KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
++ H A G+ V++ LID Y+K G + A +F +P+ RN+VSW++M+ Y
Sbjct: 198 VREVHAHAIRRGYALHTHVATTLIDCYAKLGIVRYAESVFAAMPE--RNVVSWSAMIGCY 255
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA- 210
+N+ +A+ LFK+ + ++ ++ +S+ I SVL+AC+ VN ++ G
Sbjct: 256 AKNERPADAIELFKDMMASDA----------DLVPNSITIVSVLNACA--GVNALSHGKL 303
Query: 211 -HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNG 268
H ++++RGFDS V V N L+ Y R G ++V R +F + +D V+WNS+I+ Y +G
Sbjct: 304 LHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHG 363
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
EA+ VF++M+ + +T +VL A +H G++ GK + + +++ +
Sbjct: 364 FGPEAVQVFEEMIH-VGFSPSIITFISVLGACSHAGLVNEGKMLFESMVEYGVTPRAEHY 422
Query: 329 TSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + GQ+D A + M E + + W A++ +H
Sbjct: 423 ACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGACRIH 464
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPCAIKSCSALHDLH 90
+ + NV SW+++I A+ +A+ F M L P T + +C+ ++ L
Sbjct: 240 MPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSITIVSVLNACAGVNALS 299
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
GK H GF V V +AL+ MY +CG L R +F I R R++VSW S+++G
Sbjct: 300 HGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHR-RDVVSWNSLISG 358
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS-VAIASVLSACSRVTVNGVTEG 209
Y + EA+ +F+E + G F S + SVL ACS + V EG
Sbjct: 359 YGMHGFGPEAVQVFEEMI----HVG---------FSPSIITFISVLGACSHAGL--VNEG 403
Query: 210 AHGFVIKRGFDSEVGVGNT--------LIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSI 260
K F+S V G T ++D R G +D + ++ M IE W ++
Sbjct: 404 ------KMLFESMVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGAL 457
Query: 261 I 261
+
Sbjct: 458 L 458
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/571 (37%), Positives = 333/571 (58%), Gaps = 34/571 (5%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G Q H G V++ LI+ YSK D+R+ F++ PQ+ + +W+S+++ +
Sbjct: 34 GLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQK--SATTWSSIISCF 91
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
QN+ +L ++ + G+ D+V + +LS C + + H
Sbjct: 92 AQNELPWMSLEFLRKMM------AGSLRPDDHVLPSATKSCGILSRCD------IGKSVH 139
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+K G+D++V VG++L+D YA+ G + +RK+FD M ++ VTW+ ++ YAQ G
Sbjct: 140 CLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENE 199
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EAL +F + + ++ N + S V+ A+ +L LG+ I IK + S VG+S+
Sbjct: 200 EALWLFKEAL-FENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSL 258
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ +Y KCG ++ A + F+++ +N+ W AM+ H ++ ++LF +M +G++PN+
Sbjct: 259 VSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
ITF++VL+ACSHAGLV EG ++ + M E IEP +HY +VD+LGRAGKL+EA +++
Sbjct: 319 ITFLNVLNACSHAGLVDEGKYYFDLM-KESRIEPTDKHYASLVDMLGRAGKLEEALEIVT 377
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M + VWG+LL +C IHKN +L AA K+FEL P + G H+ LSN YA GR+ED
Sbjct: 378 NMPIDPTESVWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFED 437
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
+ R L+++R K G S VE R KVH F G++ H + ++IYE L EL ++++ GY
Sbjct: 438 AAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGY 497
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
V D + V+ +VD +EK T+R HSE+LA NLRVCGDCH I+
Sbjct: 498 VADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKF 557
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+S R I+VRD+ RFH F+DG CSC DYW
Sbjct: 558 MSICTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 174/331 (52%), Gaps = 16/331 (4%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
+W+S+I+ A+ +L M SL P P A KSC L GK H +
Sbjct: 83 TWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLS 142
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G+ DVFV S+L+DMY+KCGE+ ARK+FDE+P +RN+V+W+ M+ GY Q E
Sbjct: 143 MKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP--LRNVVTWSGMMYGYAQMGENEE 200
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
AL LFKE L E N+ V+ + ++V+S C+ T+ + G IK F
Sbjct: 201 ALWLFKEALFE------------NLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSF 248
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
DS VG++L+ Y++ G ++ + +VFD + ++ WN+++ AQ+ + +++F +
Sbjct: 249 DSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKR 308
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M K + +K N +T VL A +H G++ GK D + + +E + S++DM + G
Sbjct: 309 M-KLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAG 367
Query: 340 QVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
+++ A + M S W A++ +H
Sbjct: 368 KLEEALEIVTNMPIDPTESVWGALLTSCTIH 398
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 27/251 (10%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
NV +W+ ++ A+ G++ EAL F +L +F I C+ L G+Q
Sbjct: 181 NVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQ 240
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
F FV S+L+ +YSKCG+L A ++FDE+P +RN+ W +ML Q+ +
Sbjct: 241 GLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVP--MRNLGIWNAMLKACAQHSH 298
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
++ + LFK L G N + +VL+ACS + V EG + F +
Sbjct: 299 TQKVIELFKRMKL-----SGMKPN-------FITFLNVLNACSHAGL--VDEGKYYFDLM 344
Query: 217 RGFDSEVGVGN----TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII---AIYAQNG 268
+ +S + + +L+D R G ++ + ++ M I+ W +++ I+
Sbjct: 345 K--ESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTSCTIHKNTE 402
Query: 269 LAAEALD-VFD 278
LAA A D VF+
Sbjct: 403 LAAFAADKVFE 413
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 103/221 (46%), Gaps = 11/221 (4%)
Query: 286 VKC-NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
V C N + +LL+ A + G +H ++K L +V ++I+ Y K +
Sbjct: 10 VPCHNYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDS 69
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHA 404
R+AF +K+ +W+++I+ + + +L+ KM+ +RP+ S +C
Sbjct: 70 RRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGIL 129
Query: 405 GL--VQEGWHWLNT-MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+ + H L+ G++ ++ G +VD+ + G++ A + + M ++ + V
Sbjct: 130 SRCDIGKSVHCLSMKTGYDADVFVG----SSLVDMYAKCGEIVYARKMFDEMPLR-NVVT 184
Query: 462 W-GSLLGACRIHKNVDLGEIAAKKLFE-LEPNNCGYHVLLS 500
W G + G ++ +N + + + LFE L N+ + ++S
Sbjct: 185 WSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVIS 225
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/580 (37%), Positives = 338/580 (58%), Gaps = 34/580 (5%)
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
SA L +QAH + G HR + + L+ + G ++ R+LF + +
Sbjct: 18 SAGPHLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDP--DSFL 75
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
+ S++ + +A+ ++ L + + SV+ AC+ +++
Sbjct: 76 FNSLIKASSNFGFSLDAVFFYRRML------------HSRIVPSTYTFTSVIKACADLSL 123
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ H V G+ S V L+ YA+ V+RKVFD M ++ + WNS+I+
Sbjct: 124 LRLGTIVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISG 183
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y QNGLA+EA++VF++M +S + ++ T +VL A + LG L LG +H+ ++ +
Sbjct: 184 YEQNGLASEAVEVFNKMRESGG-EPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRM 242
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+V++ TS+++M+ +CG V AR F+ M E NV SWTAMI+GYGMH EA+++F++M
Sbjct: 243 NVVLATSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMK 302
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
GV PN +T+V+VLSAC+HAGL+ EG +M E+ + PGVEH+ CMVD+ GR G L
Sbjct: 303 ACGVVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLL 362
Query: 444 KEAYDLIEGMKVKADF-VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
EAY + G+ + VW ++LGAC++HKN DLG A+ L EP N G++VLLSN+
Sbjct: 363 NEAYQFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISAEPENPGHYVLLSNM 422
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
YA AGR + VE R++M R L K G+S +++ + + F +GDK HP+ +IY YL+EL
Sbjct: 423 YALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVENRSYLFSMGDKSHPETNEIYCYLDEL 482
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVC 604
+ ++ GY S +H++++EE+E LR HSEKLA NLR+C
Sbjct: 483 MWRCKDAGYAPAPESAMHELEEEEREYALRYHSEKLAVAFGLMKTCHGVTLRIVKNLRIC 542
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH+ I+ IS V++REI+VRD RFH+F++G CSC DYW
Sbjct: 543 EDCHSAIKFISVVMNREIIVRDKLRFHHFREGSCSCSDYW 582
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 179/348 (51%), Gaps = 25/348 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF D ++ F +NS+I + G S++A+ + M + P+ TF IK+C+ L
Sbjct: 64 LFRSVSDPDS-FLFNSLIKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLS 122
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G H F+ G+ + FV +AL+ Y+K ARK+FDE+PQ R+I++W SM
Sbjct: 123 LLRLGTIVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFDEMPQ--RSIIAWNSM 180
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY QN A EA+ +F + E GG DS SVLSACS++ +
Sbjct: 181 ISGYEQNGLASEAVEVFNKM----RESGGEP--------DSATFVSVLSACSQLGSLDLG 228
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H ++ G V + +L++ ++R G V +R VFD M E + V+W ++I+ Y +
Sbjct: 229 CWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMH 288
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EA++VF +M K+ V N VT AVL A AH G++ G+ + M E V+
Sbjct: 289 GYGVEAMEVFHRM-KACGVVPNRVTYVAVLSACAHAGLINEGRLV---FASMKQEYGVVP 344
Query: 328 GTS----IIDMYCKCGQVDLARKAFNQMKEKNVRS--WTAMIAGYGMH 369
G ++DM+ + G ++ A + + + + WTAM+ MH
Sbjct: 345 GVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMH 392
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 153/307 (49%), Gaps = 25/307 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + ++ +WNS+I+ + G + EA+ F+ MR+ P +TF + +CS L L G
Sbjct: 169 MPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLG 228
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H+ G +V ++++L++M+S+CG++ AR +FD + + N+VSWT+M++GY
Sbjct: 229 CWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSMNE--GNVVSWTAMISGYG 286
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ EA+ +F CG V + V +VLSAC+ + + EG
Sbjct: 287 MHGYGVEAMEVFHRM----KACG--------VVPNRVTYVAVLSACAHAGL--INEGRLV 332
Query: 213 FV-IKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGMIEKDAVT--WNSIIAIYAQN 267
F +K+ + GV + ++D + RGG ++ + + G+ ++ V W +++ +
Sbjct: 333 FASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMH 392
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
++V + ++ + L + + A+A G + + + + +I+ L++ V
Sbjct: 393 KNFDLGVEVAENLISAEPENPGHYVLLSNMYALA--GRMDRVESVRNVMIQRGLKKQ--V 448
Query: 328 GTSIIDM 334
G S ID+
Sbjct: 449 GYSTIDV 455
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/670 (33%), Positives = 364/670 (54%), Gaps = 57/670 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + + N +W +I+ AR G S F M+ P + T +K CS +
Sbjct: 346 LFDE-IPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDN 404
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L GK H G DV + ++++D+Y KC A +LF+ + + ++VSW M
Sbjct: 405 NLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEG--DVVSWNIM 462
Query: 148 LTGYVQNDNAREALLLFKEFLLEES-----------ECGGASENSDNVF--------VDS 188
+ Y++ + ++L +F+ ++ +CG + ++ +
Sbjct: 463 IGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSA 522
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD----VSRK 244
V + L S ++ + HG V+K GFDS+ + ++L++ Y + G +D + R
Sbjct: 523 VTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRD 582
Query: 245 VFDGMIEKD------------AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
V ++ K V+W S+++ Y NG + L F MV+ V + T
Sbjct: 583 VPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVREL-VVVDIRT 641
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
++ ++ A A+ G+L G+ +H V K+ VG+S+IDMY K G +D A F Q
Sbjct: 642 VTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSN 701
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
E N+ WT+MI+GY +H + A+ LF +M+ G+ PN +TF+ VL+ACSHAGL++EG
Sbjct: 702 EPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCR 761
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ M + I PGVEH MVDL GRAG L + + I + VW S L +CR+H
Sbjct: 762 YFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLH 821
Query: 473 KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSL 532
KNV++G+ ++ L ++ P++ G +VLLSN+ A+ RW++ R RSLM R + K PG S
Sbjct: 822 KNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSW 881
Query: 533 VELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLR 592
++L+ ++H F++GD+ HPQ ++IY YL+ L +L+E+GY D+ V+ DV++E+ E+ +
Sbjct: 882 IQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLIS 941
Query: 593 IHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFK 634
HSEKLA NLR+C DCH I+ S+++DREI+VRD RFH+FK
Sbjct: 942 HHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHFK 1001
Query: 635 DGLCSCGDYW 644
G CSCGDYW
Sbjct: 1002 HGSCSCGDYW 1011
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/526 (24%), Positives = 245/526 (46%), Gaps = 89/526 (16%)
Query: 77 PCAIKSCSALHDLHSGKQA-----HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLF 131
P ++SCS H S H G + + ++ L+ +Y+K ++ A+KLF
Sbjct: 288 PLWLQSCSLYHFTLSNSPPPLGTLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLF 347
Query: 132 DEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAI 191
DEIPQ RN +WT +++G+ + ++ LF+E + GA N +
Sbjct: 348 DEIPQ--RNTQTWTILISGFARAGSSEMVFNLFREM-----QAKGACPN-------QYTL 393
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
+SVL CS + +G H ++++ G D +V +GN+++D Y + + + ++F+ M E
Sbjct: 394 SSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNE 453
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCN---------------------- 289
D V+WN +I Y + G ++LD+F ++ V N
Sbjct: 454 GDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCM 513
Query: 290 --------AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
AVT S L+ + L + LG+ +H V+K + + +S+++MYCKCG++
Sbjct: 514 VECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRM 573
Query: 342 D-----LARKAFNQMKEKNVR-----------SWTAMIAGYGMHCRAREALDLFYKMIKA 385
D L + +++ N R SW +M++GY + + + L F M++
Sbjct: 574 DKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRE 633
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWH---WLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
V + T +++SAC++AG+++ G H ++ +GH + G ++D+ ++G
Sbjct: 634 LVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVG----SSLIDMYSKSGS 689
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYH 496
L +A+ ++ + + V+W S++ +H + A LFE + PN +
Sbjct: 690 LDDAW-MVFRQSNEPNIVMWTSMISGYALHGQ----GMHAIGLFEEMLNQGIIPNEVTFL 744
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF----SLVELRGK 538
+L N ++AG E+ R +MK+ PG S+V+L G+
Sbjct: 745 GVL-NACSHAGLIEEGCRYFRMMKD-AYCINPGVEHCTSMVDLYGR 788
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/571 (38%), Positives = 327/571 (57%), Gaps = 33/571 (5%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K H + DV + + LI+ YSKCG + AR++FD + +R ++VSW +M+ Y
Sbjct: 80 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER--SLVSWNTMIGLY 137
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+N EAL +F E ++ I+SVLSAC + H
Sbjct: 138 TRNRMESEALDIFLEM------------RNEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+K D + VG L+D YA+ G + + +VF+ M +K +VTW+S++A Y QN
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EAL ++ + + ++ N TLS+V+ A ++L L GK +H + K +V V +S
Sbjct: 246 EALLLYRR-AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+DMY KCG + + F++++EKN+ W +I+G+ H R +E + LF KM + G+ PN
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+TF S+LS C H GLV+EG + M + + P V HY CMVD+LGRAG L EAY+LI+
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
+ +WGSLL +CR++KN++L E+AA+KLFELEP N G HVLLSNIYA +WE+
Sbjct: 425 SIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEE 484
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
+ ++R L+++ + K G S ++++ KVH F VG+ HP+ +I L+ L +K ++ GY
Sbjct: 485 IAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGY 544
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
+ +HDV+ +KE L HSEKLA NLR+C DCH ++
Sbjct: 545 KPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKA 604
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S R I+VRD RFH+F DG CSCGD+W
Sbjct: 605 ASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 183/341 (53%), Gaps = 8/341 (2%)
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
N F + + +L C+R + HG +I+ + +V + N LI+AY++ G V+++
Sbjct: 56 NEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELA 115
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA- 301
R+VFDGM+E+ V+WN++I +Y +N + +EALD+F +M ++ K + T+S+VL A
Sbjct: 116 RQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEM-RNEGFKFSEFTISSVLSACGV 174
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+ L K +H +K ++ ++ VGT+++D+Y KCG + A + F M++K+ +W++
Sbjct: 175 NCDALECKK-LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSS 233
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
M+AGY + EAL L+ + + + N T SV+ ACS+ + EG ++ + +
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ-MHAVICKS 292
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
V VD+ + G L+E+Y + ++ K + +W +++ H I
Sbjct: 293 GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK-NLELWNTIISGFAKHARPKEVMIL 351
Query: 482 AKKLFE--LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMK 520
+K+ + + PN + LLS + + G E+ R LM+
Sbjct: 352 FEKMQQDGMHPNEVTFSSLLS-VCGHTGLVEEGRRFFKLMR 391
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 172/352 (48%), Gaps = 33/352 (9%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ ++ SWN++I R EAL F MR + T + +C D K+
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H + +++V +AL+D+Y+KCG + DA ++F+ + ++ V+W+SM+ GYVQN
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD--KSSVTWSSMVAGYVQN 241
Query: 155 DNAREALLLFK---EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
N EALLL++ LE+++ ++SV+ ACS + + H
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQ---------------FTLSSVICACSNLAALIEGKQMH 286
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+ K GF S V V ++ +D YA+ G + S +F + EK+ WN+II+ +A++
Sbjct: 287 AVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPK 346
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV-IKMDLEESVIVGTS 330
E + +F++M + + N VT S++L H G++ G+ + L +V+ +
Sbjct: 347 EVMILFEKM-QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSC 405
Query: 331 IIDMYCKCGQVDLARKAFNQMK----EKNVRSWTAMIAGYGMHCRAREALDL 378
++D+ G+ L +A+ +K + W +++A CR + L+L
Sbjct: 406 MVDIL---GRAGLLSEAYELIKSIPFDPTASIWGSLLAS----CRVYKNLEL 450
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F DK++V +W+S++A + + EAL + +++SL + T I +CS L
Sbjct: 219 VFESMQDKSSV-TWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLA 277
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GKQ H GF +VFV+S+ +DMY+KCG L ++ +F E+ + +N+ W ++
Sbjct: 278 ALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE--KNLELWNTI 335
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G+ ++ +E ++LF++ D + + V +S+LS C + V
Sbjct: 336 ISGFAKHARPKEVMILFEKM------------QQDGMHPNEVTFSSLLSVCGHTGL--VE 381
Query: 208 EGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
EG F + R G V + ++D R G + + ++ + + A W S++A
Sbjct: 382 EGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/550 (37%), Positives = 335/550 (60%), Gaps = 17/550 (3%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ ++++ +WN +I+ + G EAL F M + P T + + + L+ L G
Sbjct: 303 LPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQG 362
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H H D F+ SAL+D+Y KC ++ AR L+D R ++V +++++GYV
Sbjct: 363 KEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDA--ARAIDVVIGSTVISGYV 420
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N + +AL +F+ +LLE+ + ++V +ASVL AC+ ++ + + HG
Sbjct: 421 LNGMSEKALQMFR-YLLEQC-----------IKPNAVTVASVLPACASISALPLGQEIHG 468
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+V++ ++ + V + L+D YA+ G +D+S +F M KD VTWNS+I+ ++QNG E
Sbjct: 469 YVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQE 528
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
ALD+F QM +K N VT+S+ L A A L + GK IH +IK ++ + +++I
Sbjct: 529 ALDLFRQMCME-GIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALI 587
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG ++LA + F M +KN SW ++I+ YG H +E++ ++M + G +P+++
Sbjct: 588 DMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHV 647
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF++++SAC+HAGLV+EG M E+ I P +EH+ CMVDL R+G+L +A I
Sbjct: 648 TFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIAD 707
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M K D +WG+LL ACR+H+NV+L +IA+++LF+L+P N GY+VL+SNI A AGRW+ V
Sbjct: 708 MPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGV 767
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+ R LMK+ ++ K PG+S V++ H F+ DK HP+ E IY L+ L +L+E GYV
Sbjct: 768 SKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREEGYV 827
Query: 573 --TDMTSVIH 580
D+ +H
Sbjct: 828 PRPDLCHPMH 837
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/436 (31%), Positives = 233/436 (53%), Gaps = 25/436 (5%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN ++ + GD A+R F +MR P +T C + C+A DL SG Q H A
Sbjct: 210 WNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAV 269
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
G ++V V++ L+ MY+KC L DA +LF+ +P+ ++V+W M++G VQN EA
Sbjct: 270 KCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPR--DDLVTWNGMISGCVQNGLLDEA 327
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGFVIKRG 218
L LF + L GA DSV + S+L A + +NG+ +G HG++I+
Sbjct: 328 LGLFCDMLRS-----GARP-------DSVTLVSLLPALT--DLNGLKQGKEVHGYIIRNC 373
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
+ + + L+D Y + V +R ++D D V +++I+ Y NG++ +AL +F
Sbjct: 374 VHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFR 433
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
+++ +K NAVT+++VL A A + L LG+ IH V++ E V ++++DMY KC
Sbjct: 434 YLLEQC-IKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKC 492
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G++DL+ F++M K+ +W +MI+ + + +EALDLF +M G++ N +T S L
Sbjct: 493 GRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSAL 552
Query: 399 SACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
SAC+ + G H + G I+ + ++D+ + G ++ A + E M K
Sbjct: 553 SACASLPAIYYGKEIHGVIIKG---PIKADIFAESALIDMYAKCGNMELALRVFEFMPDK 609
Query: 457 ADFVVWGSLLGACRIH 472
+ V W S++ A H
Sbjct: 610 NE-VSWNSIISAYGAH 624
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 141/492 (28%), Positives = 243/492 (49%), Gaps = 48/492 (9%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLF---NKYVDKNNVFS------------WNSVI 45
+++ + VS +SN + + +T L ++ ++ D VFS WN +I
Sbjct: 52 LQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLI 111
Query: 46 ADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFG 103
G A+ + M + +P T P +KSC+AL + G+ H+ A G
Sbjct: 112 RGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATG 171
Query: 104 FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
DV+V SALI MYS G L DAR FD +P R+ V W M+ GY++ + A+ L
Sbjct: 172 LASDVYVGSALIKMYSDAGLLRDARDAFDGMPW--RDCVLWNVMMDGYIKAGDVGGAVRL 229
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT--VNGVTEGAHGFVIKRGFDS 221
F+ + E A+ +A LS C+ ++GV H +K G +
Sbjct: 230 FRNMRVSGCEPNFAT------------LACFLSVCAAEADLLSGVQ--LHSLAVKCGLEQ 275
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
EV V NTL+ YA+ +D + ++F+ + D VTWN +I+ QNGL EAL +F M+
Sbjct: 276 EVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDML 335
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+S + ++VTL ++L A+ L L+ GK +H +I+ + + ++++D+Y KC V
Sbjct: 336 RS-GARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDV 394
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
AR ++ + +V + +I+GY ++ + +AL +F +++ ++PN +T SVL AC
Sbjct: 395 RTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPAC 454
Query: 402 ---SHAGLVQE--GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
S L QE G+ N + +E ++D+ + G+L ++ + M +K
Sbjct: 455 ASISALPLGQEIHGYVLRNAYEGKCYVE------SALMDMYAKCGRLDLSHYIFSKMSLK 508
Query: 457 ADFVVWGSLLGA 468
D V W S++ +
Sbjct: 509 -DEVTWNSMISS 519
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 153/335 (45%), Gaps = 15/335 (4%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGF---HRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
++ C + L G Q H +A + G H + + + L+ MY DA +F +P+
Sbjct: 39 LRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALPR 98
Query: 137 RIR-NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+ + W ++ G+ + A+L + + + D+ + V+
Sbjct: 99 AAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSP----------DAHTLPYVV 148
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
+C+ + + H G S+V VG+ LI Y+ G + +R FDGM +D V
Sbjct: 149 KSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCV 208
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
WN ++ Y + G A+ +F M + + + N TL+ L A L G +H
Sbjct: 209 LWNVMMDGYIKAGDVGGAVRLFRNM-RVSGCEPNFATLACFLSVCAAEADLLSGVQLHSL 267
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+K LE+ V V +++ MY KC +D A + F + ++ +W MI+G + EA
Sbjct: 268 AVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEA 327
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
L LF M+++G RP+ +T VS+L A + +++G
Sbjct: 328 LGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQG 362
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F DKN V SWNS+I+ G E++ M++ P TF I +C+
Sbjct: 602 VFEFMPDKNEV-SWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAG 660
Query: 88 DLHSGKQAHQ---QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
+ G Q Q + ++ + F + ++D+YS+ G L A + ++P
Sbjct: 661 LVEEGLQLFQCMTKEYLIAPRMEHF--ACMVDLYSRSGRLDKAIQFIADMP 709
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 248/643 (38%), Positives = 359/643 (55%), Gaps = 43/643 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + V S+N++I+ A ++V A+ F MR+L T I +C
Sbjct: 96 LFDENPQPDTV-SYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCDRV 154
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL KQ H A GF V++A + YSK G L +A +F + +R+ VSW SM
Sbjct: 155 DLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM-DGLRDEVSWNSM 211
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y Q+ +AL L+KE + + + +D +ASVL+A + +
Sbjct: 212 IVAYGQHKEGAKALALYKEMIFKGFK------------IDMFTLASVLNALTSLDHLIGG 259
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV---SRKVFDGMIEKDAVTWNSIIAIY 264
HG +IK GF VG+ LID Y++ G D S KVF ++ D V WN++I+ Y
Sbjct: 260 RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGY 319
Query: 265 AQNGL-AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
+ N + EA+ F QM + + + + V A ++L GK IH IK ++
Sbjct: 320 SMNEEHSEEAVKSFRQM-QRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPS 378
Query: 324 SVI-VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ I V ++I +Y K G + AR+ F++M E N S+ MI GY H EAL L+ +M
Sbjct: 379 NRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRM 438
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
+ +G+ PN ITFV++LSAC+H G V EG + NTM F IEP EHY CM+DLLGRAGK
Sbjct: 439 LDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGK 498
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
L+EA I+ M K V W +LLGACR HKN+ L E AAK+L ++P +V+L+N+
Sbjct: 499 LEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLANM 558
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
YA+AG+WE++ R M+ +R+ K PG S +E++ K H F+ D HP ++ EYLEE+
Sbjct: 559 YADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEM 618
Query: 563 NVKLQEVGYVTDMT-SVIHDVDQEEKEMTLRI--HSEKLA------------------NL 601
K+++VGYV D +++ + + E E +R+ HSEKLA NL
Sbjct: 619 MKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEEIVVVKNL 678
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
R+CGDCH I+ +S V REI+VRD+ RFH FKDG CSCGDYW
Sbjct: 679 RICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 127/288 (44%), Gaps = 36/288 (12%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N ++ AYA+ + ++R++FD + D V++N++I+ YA A+ +F +M +
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRM-RELGF 136
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+ + TLS ++ A + L K +H + + V + + Y K G + A
Sbjct: 137 EVDGFTLSGLIAACCDR--VDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVS 194
Query: 347 AFNQMKE-KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS--- 402
F M ++ SW +MI YG H +AL L+ +MI G + + T SVL+A +
Sbjct: 195 VFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLD 254
Query: 403 --------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
H L++ G+H + +G ++D + G D + +
Sbjct: 255 HLIGGRQFHGKLIKAGFHQNSHVG------------SGLIDFYSKCGGRDGMSDSEKVFQ 302
Query: 455 --VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE-----PNNCGY 495
+ D V+W +++ + N + E A K +++ P++C +
Sbjct: 303 EILSPDLVLWNTMISGYSM--NEEHSEEAVKSFRQMQRIGHRPDDCSF 348
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 80/204 (39%), Gaps = 44/204 (21%)
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L GK +H +K + S + +++Y KCG + AR AF+ +E NV S+ ++
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKA 83
Query: 366 YGMHCR----------------------------ARE---ALDLFYKMIKAGVRPNYITF 394
Y + ARE A+ LF +M + G + T
Sbjct: 84 YAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTL 143
Query: 395 VSVLSA-CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG----CMVDLLGRAGKLKEAYDL 449
+++A C L+++ H F + G + Y V + G L+EA +
Sbjct: 144 SGLIAACCDRVDLIKQ--------LHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 450 IEGMKVKADFVVWGSLLGACRIHK 473
GM D V W S++ A HK
Sbjct: 196 FYGMDGLRDEVSWNSMIVAYGQHK 219
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/524 (40%), Positives = 311/524 (59%), Gaps = 32/524 (6%)
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
R++ SWTS++ GY QND EAL L L + G AS+L A
Sbjct: 4 RDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNG------------FTFASLLKAA 51
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+G+ E H +K + +V VG+ L+D YAR G +D++ VFD + K+ V+WN
Sbjct: 52 GASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWN 111
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
++IA +A+ G L +F +M ++ + T S+V AIA +G L GK +H +IK
Sbjct: 112 ALIAGFARKGDGETTLLMFAEMQRN-GFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIK 170
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
S VG +I+DMY K G + ARK F+ + +K++ +W +M+ + + REA+
Sbjct: 171 SGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTH 230
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
F +M K GV N ITF+S+L+ACSH GLV+EG + + M E N+EP ++HY +VDLLG
Sbjct: 231 FEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMM-KEHNLEPEIDHYVTVVDLLG 289
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVL 498
RAG L +A I M +K VWG+LLG+CR+HKN +G+ AA +FEL+P++ G VL
Sbjct: 290 RAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVL 349
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEY 558
L NIYA+ G+W+ R R +MK + K P S VE+ VH F+ D HP+ E+IY+
Sbjct: 350 LYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKK 409
Query: 559 LEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------N 600
EE+++++++ GYV + V+ VD++E++ L+ HSEK+A N
Sbjct: 410 WEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKN 469
Query: 601 LRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+R+CGDCH+ R ISKV +REIVVRD+ RFH+F G CSCGDYW
Sbjct: 470 IRICGDCHSAFRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 167/335 (49%), Gaps = 16/335 (4%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SW S+IA A+ EAL M + P TF +K+ A G+Q H
Sbjct: 8 SWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALT 67
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
+ +H DV+V SAL+DMY++CG + A +FD++ +N VSW +++ G+ + +
Sbjct: 68 VKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLES--KNGVSWNALIAGFARKGDGET 125
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
LL+F E + +SV SA + + + H +IK G
Sbjct: 126 TLLMFAEM------------QRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGE 173
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
VGNT++D YA+ G + +RKVFD + +KD VTWNS++ +AQ GL EA+ F++
Sbjct: 174 RLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEE 233
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M K V N +T ++L A +H G+++ GK D + + +LE + +++D+ + G
Sbjct: 234 MRK-CGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAG 292
Query: 340 QVDLARKAFNQMKEKNVRS-WTAMIAGYGMHCRAR 373
++ A +M K + W A++ MH A+
Sbjct: 293 LLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK 327
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 18/254 (7%)
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M +D +W S+IA YAQN + EAL + + K N T +++L A +
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGL-LLGMLRGRFKPNGFTFASLLKAAGASASSGI 59
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
G+ IH +K D + V VG++++DMY +CG++D+A F+Q++ KN SW A+IAG+
Sbjct: 60 GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 119
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
L +F +M + G + T+ SV SA + G +++G W+ H I+ G E
Sbjct: 120 KGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQG-KWV----HAHMIKSG-E 173
Query: 429 HYGCMV-----DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
V D+ ++G + +A + + + K D V W S+L A LG A
Sbjct: 174 RLSAFVGNTILDMYAKSGSMIDARKVFDHVD-KKDLVTWNSMLTA---FAQYGLGREAVT 229
Query: 484 KLFELEPNNCGYHV 497
E+ CG H+
Sbjct: 230 HFEEMR--KCGVHL 241
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 168/385 (43%), Gaps = 79/385 (20%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ KN V SWN++IA AR GD L F+ M++ T T+ + + +
Sbjct: 98 VFDQLESKNGV-SWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIG 156
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H G FV + ++DMY+K G + DARK+FD + + +++V+W SM
Sbjct: 157 ALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDK--KDLVTWNSM 214
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
LT + Q REA+ F+E +CG V ++ + S+L+ACS
Sbjct: 215 LTAFAQYGLGREAVTHFEEM----RKCG--------VHLNQITFLSILTACS-------- 254
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM----IEKDAVTWNSIIAI 263
HG ++K G ++ FD M +E + + +++ +
Sbjct: 255 ---HGGLVKEG------------------------KQYFDMMKEHNLEPEIDHYVTVVDL 287
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
+ GL +AL +M +K A A+L + ++G+ D V ++D ++
Sbjct: 288 LGRAGLLNDALVFIFKM----PMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDD 343
Query: 324 SVIVGTSII--DMYCKCGQVDLARKAFNQMKEKNVR-----SWTAM-------IAGYGMH 369
+ G ++ ++Y GQ D A + MK V+ SW + +A H
Sbjct: 344 T---GPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTH 400
Query: 370 CRAREAL----DLFYKMIKAGVRPN 390
R+ E ++ ++ KAG PN
Sbjct: 401 PRSEEIYKKWEEISIQIRKAGYVPN 425
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 21/199 (10%)
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA--CSHAGLVQ 408
M +++ SWT++IAGY + EAL L M++ +PN TF S+L A S + +
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
E H L +++ V ++D+ R G++ A + + ++ K + V W +L+
Sbjct: 61 EQIHALTV---KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESK-NGVSWNALIAG 116
Query: 469 CRIHKNVDLGEIAAKKLFELEPNNC-GYHVLLSNIYA--------NAGRWEDVERTRSLM 519
+ GE E++ N H S++++ G+W +S
Sbjct: 117 FARKGD---GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKS-- 171
Query: 520 KNRRLAKTPGFSLVELRGK 538
RL+ G +++++ K
Sbjct: 172 -GERLSAFVGNTILDMYAK 189
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/558 (37%), Positives = 338/558 (60%), Gaps = 17/558 (3%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ ++++ +WN +I+ + G VEA F M++ P T + + + L+ L G
Sbjct: 303 MPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQG 362
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H + DVF+ SAL+D+Y KC ++ A+ L+D R ++V ++M++GYV
Sbjct: 363 KEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDA--ARAIDVVIGSTMISGYV 420
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N + EAL +F+ +LLE+ + ++V IASVL C+ + + + HG
Sbjct: 421 LNGMSEEALQMFR-YLLEQC-----------IKPNAVTIASVLPGCASMAALPLGQQIHG 468
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+V++ ++ + V + L+D YA+ G +D+S +F M +KD VTWNS+I+ ++QNG E
Sbjct: 469 YVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQE 528
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
ALD+F QM +K N +T+SA L A A L + GK IH IK ++ + +++I
Sbjct: 529 ALDLFRQMCME-GIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALI 587
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG ++LA + F M +KN SW ++I+ YG H +E++ L + M + G +P+++
Sbjct: 588 DMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHV 647
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF++++SAC+HAGLV+EG M ++ I P +EH+ CMVDL R+GKL +A I
Sbjct: 648 TFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIAD 707
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M K D +WG+LL ACR+H+NV+L +IA+++LF+L+P N GY+VL+SNI A AGRW+ V
Sbjct: 708 MPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGV 767
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+ R LMK+ ++ K PG+S V++ H F+ DK HP+ E IY L+ L +L+E GYV
Sbjct: 768 SKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREEGYV 827
Query: 573 --TDMTSVIHDVDQEEKE 588
D+ +H + + E
Sbjct: 828 PRPDLCHPMHPDNNTQVE 845
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 236/444 (53%), Gaps = 25/444 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + WN ++ + GD A+R F +MR P +T C + C+ DL SG
Sbjct: 202 IPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSG 261
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H A G +V V++ L+ MY+KC L DA +LF+ +PQ ++V+W M++G V
Sbjct: 262 AQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQ--DDLVTWNGMISGCV 319
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--A 210
QN EA LF + + GA DS+ + S+L A + +NG+ +G
Sbjct: 320 QNGLFVEAFGLFYDM-----QRSGARP-------DSITLVSLLPALT--DLNGLKQGKEV 365
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG++++ + +V + + L+D Y + V +++ ++D D V +++I+ Y NG++
Sbjct: 366 HGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMS 425
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EAL +F +++ +K NAVT+++VL A + L LG+ IH V++ E V ++
Sbjct: 426 EEALQMFRYLLEQC-IKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESA 484
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++DMY KCG++DL+ F +M +K+ +W +MI+ + + + +EALDLF +M G++ N
Sbjct: 485 LMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYN 544
Query: 391 YITFVSVLSACSHAGLVQEG--WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
IT + LSAC+ + G H + G I+ + ++D+ + G L+ A
Sbjct: 545 NITISAALSACASLPAIYYGKEIHGVTIKG---PIKADIFAESALIDMYAKCGNLELALR 601
Query: 449 LIEGMKVKADFVVWGSLLGACRIH 472
+ E M K + V W S++ A H
Sbjct: 602 VFEFMPDKNE-VSWNSIISAYGAH 624
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 153/335 (45%), Gaps = 15/335 (4%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGF---HRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
++ C + L G Q H +A + G H + + + L+ MY DA +F +P+
Sbjct: 39 LRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALPR 98
Query: 137 RIR-NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+ + W ++ G+ A+L + + S S D+ + V+
Sbjct: 99 AAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMW---SHPAAPSP-------DAHTLPYVV 148
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
+C+ + + H G ++V VG+ L+ YA G + +R FDG+ E+D V
Sbjct: 149 KSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCV 208
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
WN ++ + G A+ +F M +++ + N TL+ L A L G +H
Sbjct: 209 LWNVMMDGCIKAGDVDGAVRLFRNM-RASGCEPNFATLACFLSVCATDADLLSGAQLHSL 267
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+K LE V V +++ MY KC +D A + F M + ++ +W MI+G + EA
Sbjct: 268 AVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEA 327
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
LFY M ++G RP+ IT VS+L A + +++G
Sbjct: 328 FGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQG 362
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 16 VDKHSTNTNLTT---LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPT 72
+D ++ NL +F DKN V SWNS+I+ G E++ M++ P
Sbjct: 587 IDMYAKCGNLELALRVFEFMPDKNEV-SWNSIISAYGAHGLVKESVSLLHGMQEEGYKPD 645
Query: 73 RSTFPCAIKSCSALHDLHSGKQAHQ---QAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
TF I +C+ + G Q Q + ++ + F + ++D+YS+ G+L A +
Sbjct: 646 HVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHF--ACMVDLYSRSGKLDKAIQ 703
Query: 130 LFDEIP 135
++P
Sbjct: 704 FIADMP 709
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 237/639 (37%), Positives = 357/639 (55%), Gaps = 63/639 (9%)
Query: 11 SVVSNVDKHS-TNTNLTTLFNKYVD---KNNVFSWNSVIADLARGGDSVEALRAFSSMRK 66
SV NV S N L +L Y D + + SWN ++A R G EA F+S +
Sbjct: 131 SVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTE 190
Query: 67 LSLTPTRSTFPCAIKSCSALHD--LHSGKQAH-QQAFIFGFHRDVFVSSALIDMYSKCGE 123
+ S +AL + GK + ++ F RDV + ++ Y++ G+
Sbjct: 191 WDVI-----------SWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGD 239
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ +AR+LFD P +R++ +WT++++GY QN EA +F E S N
Sbjct: 240 MVEARRLFDAAP--VRDVFTWTAVVSGYAQNGMLEEARRVFDAM----PERNAVSWN--- 290
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
A V + R ++ E + + V NT++ YA+ G ++ ++
Sbjct: 291 --------AMVAAYIQRRMMDEAKELFNMMPCR-----NVASWNTMLTGYAQAGMLEEAK 337
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VFD M +KDAV+W +++A Y+Q G + E L +F +M + + N + VL A +
Sbjct: 338 AVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW-VNRSAFACVLSTCADI 396
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L G +H ++I+ VG +++ MY KCG ++ AR AF +M+E++V SW MI
Sbjct: 397 AALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMI 456
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
AGY H +EAL++F M +P+ IT V VL+ACSH+GLV++G + +M H+F +
Sbjct: 457 AGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGV 516
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
EHY CM+DLLGRAG+L EA+DL++ M + D +WG+LLGA RIH+N +LG AA+
Sbjct: 517 TAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAE 576
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
K+FELEP N G +VLLSNIYA++G+W D + R +M+ R + K PGFS +E++ KVH F
Sbjct: 577 KIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFS 636
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---- 599
GD HP+ EKIY +LE+L++++++ GYV+ V+HDV++EEKE L+ HSEKLA
Sbjct: 637 AGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYG 696
Query: 600 --------------NLRVCGDCHTV----IRLISKVVDR 620
NLRVCGDCH I L+ KV R
Sbjct: 697 ILNIPPGRPIRVIKNLRVCGDCHNAFKAWIELMLKVSGR 735
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 170/369 (46%), Gaps = 55/369 (14%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
+V S+ I + + G ++DA +LF +P+R + ++ +ML GY N A LF+
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRR--STSTYNAMLAGYSANGRLPLAASLFRA 94
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVG 226
++ S N + ++A++S L+ RG E+ V
Sbjct: 95 IPRPDN-------YSYNTLLHALAVSSSLADA------------------RGLFDEMPVR 129
Query: 227 -----NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
N +I ++A G V ++R FD EKDAV+WN ++A Y +NG EA +F+
Sbjct: 130 DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN--- 186
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
+ + + ++ +A++ G + + + D++ D V+ ++ Y + G +
Sbjct: 187 --SRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRD----VVSWNIMVSGYARRGDM 240
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
AR+ F+ ++V +WTA+++GY + EA +F M + N +++ ++++A
Sbjct: 241 VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAY 296
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEP--GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
++ E FN+ P V + M+ +AG L+EA + + M K D
Sbjct: 297 IQRRMMDEA-------KELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK-DA 348
Query: 460 VVWGSLLGA 468
V W ++L A
Sbjct: 349 VSWAAMLAA 357
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 122/274 (44%), Gaps = 27/274 (9%)
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
+ EV N I A+ R G V + ++F M + T+N+++A Y+ NG A +F
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC 338
+ + + N +L A+A L + + D+ M + +SV +I +
Sbjct: 94 AIPRPDNYSYN-----TLLHALAVSSSLADARGLFDE---MPVRDSVTYNV-MISSHANH 144
Query: 339 GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
G V LAR F+ EK+ SW M+A Y + R EA LF + V I++ +++
Sbjct: 145 GLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDV----ISWNALM 200
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPG--VEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
S G VQ W ++ F+ PG V + MV R G + EA L + V+
Sbjct: 201 S-----GYVQ--WGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR 253
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
D W +++ +N L E A+++F+ P
Sbjct: 254 -DVFTWTAVVSG--YAQNGMLEE--ARRVFDAMP 282
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/584 (38%), Positives = 328/584 (56%), Gaps = 60/584 (10%)
Query: 110 VSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLL 169
++ I + S G L + +F+ NI ++ ++L + Q++ + F L+
Sbjct: 60 IAVKFIGVSSSHGNLRHSVLIFNHF-LSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLV 118
Query: 170 EESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTL 229
N+ N D SVL AC+ + + H FV K G +S + V N+L
Sbjct: 119 --------LPNAPNP--DEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSL 168
Query: 230 IDAYAR-------------------------------GGHVDVSRKVFDGMIEKDAVTWN 258
+D Y + G VD +R VFDGM+EK+ V+W+
Sbjct: 169 VDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWS 228
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
++I+ YA+N A+A+++F QM + N VTL +VL A AHLG L LGK IH + +
Sbjct: 229 TMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRR 288
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
+E + +G ++ DMY KCG V A+ F++M E++V SW+ +I G M+ A EA +
Sbjct: 289 NKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNF 348
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
F +MI+ G+ PN I+F+ +L+AC+HAGLV +G + + M + I P +EHYGC+VDLL
Sbjct: 349 FAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLS 408
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVL 498
RAG+L +A LI M ++ + +VWG+LLG CRI+K+ + GE ++ EL+ N+ G V
Sbjct: 409 RAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVY 468
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEY 558
L+N+YA+ GR +D R M++ + KTPG S +E+ V+ F +GD HPQ +IY
Sbjct: 469 LANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSM 528
Query: 559 LEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------N 600
+ EL K++ GY VIH++D+EEKE L HSEKLA N
Sbjct: 529 IRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKN 588
Query: 601 LRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
LRVC DCH I++ISK+V+REIVVRD RFH+FKDG CSC DYW
Sbjct: 589 LRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCSCNDYW 632
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 180/371 (48%), Gaps = 45/371 (12%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL--SLTPTRSTFPCAIKSCSA 85
+FN ++ N+F++N+++ ++ + F++ L + P TF +K+C+
Sbjct: 80 IFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAG 139
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI------- 138
L + G++ H +G ++FV ++L+D+Y K G A+KLFDE+ R
Sbjct: 140 LAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTL 199
Query: 139 ----------------------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
+N+VSW++M++GY +N+ +A+ LF++ E GG
Sbjct: 200 ISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHE----GG 255
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
+ N V + SVLSAC+ + + + H F+ + + + +GN L D YA+
Sbjct: 256 LAPN-------DVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKC 308
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G V ++ VF M E+D ++W+ II A G A EA + F +M++ ++ N ++ +
Sbjct: 309 GCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIED-GLEPNDISFMGL 367
Query: 297 LLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EK 354
L A H G++ G D + ++ + + ++D+ + G++D A N M +
Sbjct: 368 LTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQP 427
Query: 355 NVRSWTAMIAG 365
NV W A++ G
Sbjct: 428 NVIVWGALLGG 438
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/637 (34%), Positives = 361/637 (56%), Gaps = 37/637 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LFN ++++V ++N+++ ++ G + EA+ F M+++ PT TF + + L
Sbjct: 255 LFNDIPERDSV-TFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLD 313
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D+ G+Q H F +VFV++AL+D YSK + +A KLF E+P+ + +S+ +
Sbjct: 314 DIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEV--DGISYNVL 371
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN-GV 206
+T Y N +E+L LFKE + + F ++IA++ ++N +
Sbjct: 372 VTCYAWNGRVKESLELFKELQFT------GFDRRNFPFATLLSIAAI-------SLNLDI 418
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H I SE+ VGN+L+D YA+ G + ++F + + +V W ++I+ Y Q
Sbjct: 419 GRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQ 478
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
GL + L +F +M ++ + +A T ++++ A A L L LGK +H +I +V
Sbjct: 479 KGLHEDGLKLFVEMQRA-KIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVF 537
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
G++++DMY KCG + A + F +M +N SW A+I+ Y + L LF +M+++G
Sbjct: 538 SGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSG 597
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
++P+ ++ +S+L ACSH GLV+EG + ++M + + P EHY +D+L R G+ EA
Sbjct: 598 LQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEA 657
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP-NNCGYHVLLSNIYAN 505
L+ M + D ++W S+L +C IHKN +L + AA +LF ++ + +V +SNIYA
Sbjct: 658 EKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAA 717
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
AG W++V + + M+ R + K P +S VE++ K H F DK HPQ +I + L+EL K
Sbjct: 718 AGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEK 777
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
+ + GY D + +H+VD+E K +L+ HSE++A NLR C DC
Sbjct: 778 MVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDC 837
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H I++ISK+V REI VRDS RFH+F+DG C+C DYW
Sbjct: 838 HAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRDYW 874
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 229/465 (49%), Gaps = 26/465 (5%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S ++++ K + TLF+ + V +W +I A+ EA F M +
Sbjct: 134 STNTMIMGYIKSGNLSEARTLFDSMFQRTAV-TWTMLIGGYAQNNQFREAFGLFIEMGRH 192
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
+ P + + + ++ +Q H G+ + VS++L+D Y K L A
Sbjct: 193 GIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLA 252
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
+LF++IP+ R+ V++ ++LTGY + REA+ LF F ++E ++ F
Sbjct: 253 FQLFNDIPE--RDSVTFNALLTGYSKEGFNREAINLF--FKMQEV----GYRPTEFTF-- 302
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
A++L+A ++ + HGFV+K F V V N L+D Y++ V + K+F
Sbjct: 303 ----AAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFY 358
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV-L 306
M E D +++N ++ YA NG E+L++F ++ + + N A LL+IA + + L
Sbjct: 359 EMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPF--ATLLSIAAISLNL 416
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
+G+ IH Q I D ++VG S++DMY KCG+ A + F+ + ++ WTAMI+ Y
Sbjct: 417 DIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSY 476
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM---GHEFNI 423
+ L LF +M +A + + T+ S++ AC+ + G + + G+ N+
Sbjct: 477 VQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNV 536
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
G +VD+ + G +K+A + + M V+ + V W +L+ A
Sbjct: 537 FSG----SALVDMYAKCGSIKDALQMFQEMPVR-NSVSWNALISA 576
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 163/296 (55%), Gaps = 17/296 (5%)
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
H+++F ++ +I Y K G LS+AR LFD + QR V+WT ++ GY QN+ REA LF
Sbjct: 129 HKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQR--TAVTWTMLIGGYAQNNQFREAFGLF 186
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV-TVNGVTEGAHGFVIKRGFDSEV 223
E + D V++A++LS + +VN V + H VIK G+DS +
Sbjct: 187 IEM------------GRHGIDPDHVSLATLLSGFTEFDSVNEVRQ-VHSHVIKLGYDSTL 233
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
V N+L+D+Y + + ++ ++F+ + E+D+VT+N+++ Y++ G EA+++F +M +
Sbjct: 234 VVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKM-QE 292
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL 343
+ T +A+L A L + G+ +H V+K + +V V +++D Y K +V
Sbjct: 293 VGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVE 352
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
A K F +M E + S+ ++ Y + R +E+L+LF ++ G F ++LS
Sbjct: 353 ASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLS 408
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%)
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+++ ++I Y K G + AR F+ M ++ +WT +I GY + + REA LF +M
Sbjct: 130 KNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEM 189
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQE 409
+ G+ P++++ ++LS + V E
Sbjct: 190 GRHGIDPDHVSLATLLSGFTEFDSVNE 216
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 233/648 (35%), Positives = 355/648 (54%), Gaps = 51/648 (7%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
T+ F+K VD++ + SW+++I+ G EA+R F M L +TP S F I S
Sbjct: 143 TSAERFFDKIVDQD-LSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMS 201
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
+ L GKQ H Q GF ++ + + + +MY KCG L A +++ ++ N V
Sbjct: 202 FTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRK--NAV 259
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
+ T ++ GY + R+ALLLF + + E E G FV S+ +L AC+ +
Sbjct: 260 ACTGLMVGYTKAARNRDALLLFGKMISEGVELDG--------FVFSI----ILKACAALG 307
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ H + IK G +SEV VG L+D Y + + +R+ F+ + E + +W+++IA
Sbjct: 308 DLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIA 367
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
Y Q+G AL+VF + ++S V N+ + + A + + L G IH IK L
Sbjct: 368 GYCQSGQFDRALEVF-KAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLV 426
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ +++I MY KCGQVD A +AF + + + +WTA+I + H +A EAL LF +M
Sbjct: 427 AYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEM 486
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
+GVRPN +TF+ +L+ACSH+GLV+EG L++M E+ + P ++HY CM+D+ RAG
Sbjct: 487 QGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGL 546
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
L+EA ++I + + D + W SLLG C H+N+++G IAA +F L+P + +V++ N+
Sbjct: 547 LQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNL 606
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
YA AG+W++ + R +M R L K S + ++GKVH F+VGD+ HPQ E+IY L+EL
Sbjct: 607 YALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKEL 666
Query: 563 NVK--------LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------------- 599
N L E + D T E KE L HSE+LA
Sbjct: 667 NFSFKKSKERLLNEENALCDFT--------ERKEQLLD-HSERLAIAYGLICTAADTPIM 717
Query: 600 ---NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
N R C DCH + +S V RE+VVRD RFH+ G CSC DYW
Sbjct: 718 VFKNTRSCKDCHDFAKRVSIVTGRELVVRDGNRFHHINSGECSCRDYW 765
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 222/473 (46%), Gaps = 31/473 (6%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
++ ++ + + S V S++++L T N+ N+ + LA+ G+ E +
Sbjct: 28 ARHANFAQIPSWVSLKSSHSSLRTHQNQQGQVENLH-----LISLAKQGNLREVHEFIRN 82
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
M K+ ++ ++ K C L L GK H + + + F+ + ++ MY C
Sbjct: 83 MDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMA-NSNKFIDNCILKMYCDCKS 141
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ A + FD+I +++ SW+++++ Y + EA+ LF L G + NS +
Sbjct: 142 FTSAERFFDKIVD--QDLSSWSTIISAYTEEGRIDEAVRLFLRMLDL-----GITPNS-S 193
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+F ++++ + + ++ + + H +I+ GF + + + + + Y + G +D +
Sbjct: 194 IF------STLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAE 247
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+ M K+AV ++ Y + +AL +F +M+ S V+ + S +L A A L
Sbjct: 248 VATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMI-SEGVELDGFVFSIILKACAAL 306
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G L GK IH IK+ LE V VGT ++D Y KC + + AR+AF + E N SW+A+I
Sbjct: 307 GDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALI 366
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
AGY + AL++F + GV N + ++ ACS + G H I
Sbjct: 367 AGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICG-----AQIHADAI 421
Query: 424 EPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ G+ Y M+ + + G++ A+ + K D V W +++ A H
Sbjct: 422 KKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTID-KPDTVAWTAIICAHAYH 473
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/519 (39%), Positives = 320/519 (61%), Gaps = 30/519 (5%)
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
+ +M+ GYV + EAL + E + +E D+ +L AC+R+
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNE------------PDNFTYPCLLKACTRLKS 147
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ HG V K G +++V V N+LI+ Y R G +++S VF+ + K A +W+S+++
Sbjct: 148 IREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA 207
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
A G+ +E L +F M T++K + + LLA A+ G L LG IH +++ E
Sbjct: 208 RAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL 267
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
++IV TS++DMY KCG +D A F +M+++N +++AMI+G +H AL +F KMI
Sbjct: 268 NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI 327
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
K G+ P+++ +VSVL+ACSH+GLV+EG M E +EP EHYGC+VDLLGRAG L
Sbjct: 328 KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 387
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
+EA + I+ + ++ + V+W + L CR+ +N++LG+IAA++L +L +N G ++L+SN+Y
Sbjct: 388 EEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLY 447
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
+ W+DV RTR+ + + L +TPGFS+VEL+GK H F+ D+ HP+ ++IY+ L ++
Sbjct: 448 SQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQME 507
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
+L+ GY D+T ++ +VD+EEK+ L+ HS+K+A NLR+C
Sbjct: 508 WQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCS 567
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCHT + IS + +REIVVRD RFH FK G CSC DYW
Sbjct: 568 DCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 175/348 (50%), Gaps = 20/348 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+D F +N++I EAL ++ M + P T+PC +K+C+ L + G
Sbjct: 92 IDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREG 151
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H Q F G DVFV ++LI+MY +CGE+ + +F+++ + SW+SM++
Sbjct: 152 KQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLES--KTAASWSSMVSARA 209
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
E LLLF+ G SE N+ + + S L AC+ + HG
Sbjct: 210 GMGMWSECLLLFR---------GMCSET--NLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
F+++ + + V +L+D Y + G +D + +F M +++ +T++++I+ A +G
Sbjct: 259 FLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGES 318
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSI 331
AL +F +M+K ++ + V +VL A +H G+++ G+ + +++K +E + +
Sbjct: 319 ALRMFSKMIKE-GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCL 377
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
+D+ + G ++ A + + EKN W ++ CR R+ ++L
Sbjct: 378 VDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS----QCRVRQNIEL 421
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 238/635 (37%), Positives = 357/635 (56%), Gaps = 41/635 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + + ++ SWN++I+ G E L+ F +MR LS+ P T I +C L
Sbjct: 253 LFDR-MPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G+ H GF D+ V ++L MY G +A KLF + ++IVSWT+M
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMD--CKDIVSWTTM 369
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY N FL E++ + D+V D + +A+VLSAC+ T+ +
Sbjct: 370 ISGYEYN------------FLPEKAIDTYRMMDQDSVKPDEITVAAVLSACA--TLGDLD 415
Query: 208 EGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
G H IK S V V N LI+ Y++ +D + +F + K+ ++W SIIA
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLR 475
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
N EAL F QM ++ NA+TL+A L A A +G L GK IH V++ +
Sbjct: 476 LNNRCFEALIFFRQM--KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDD 533
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+ +++DMY +CG++++A FN K K+V SW ++ GY + ++LF +M+KA
Sbjct: 534 FLPNALLDMYVRCGRMNIAWNQFNSQK-KDVSSWNILLTGYSERGQGSVVVELFDRMVKA 592
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
VRP+ ITF+S+L C + +V++G + + M E+ + P ++HY C+VDLLGRAG+L+E
Sbjct: 593 RVRPDEITFISLLCGCGKSQMVRQGLMYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQE 651
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A+ I+ M V D VWG+LL ACRIH N+DLGE++A+++FEL+ + GY++LL N+YA+
Sbjct: 652 AHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYAD 711
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
G+W +V + R +MK L G S VE++GKVHAFL DK HPQ ++I L+ K
Sbjct: 712 CGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEK 771
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
+ EVG T S D + ++ HSE+ A NL +C C
Sbjct: 772 MSEVGLTTSSESSSMDETEISRDEIFCGHSERKAIAFGLINSVPGMPIWVTKNLNMCESC 831
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
H ++ ISK V REI VRDS+ FH+FKDG CSCGD
Sbjct: 832 HDTVKFISKTVRREISVRDSEHFHHFKDGECSCGD 866
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 231/437 (52%), Gaps = 24/437 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHS 91
+ + N+FSWN ++ A+ G EA+ + M + + P TFPC +++C + DL
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G++ H +G+ D+ V +ALI MY KCG++ AR LFD +P+ R+I+SW +M++GY
Sbjct: 215 GREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPR--RDIISWNAMISGY 272
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+N E L LF F + G S + D + + SV+SAC + + H
Sbjct: 273 FENGMGHEGLKLF--FAMR-----GLSVDP-----DLMTLTSVISACELLGDRRLGRDIH 320
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+VI GF ++ V N+L Y G + K+F M KD V+W ++I+ Y N L
Sbjct: 321 AYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPE 380
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+A+D + +M+ VK + +T++AVL A A LG L G +H IK L VIV ++
Sbjct: 381 KAIDTY-RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNL 439
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
I+MY KC +D A F+ + KNV SWT++IAG ++ R EAL +F++ +K ++PN
Sbjct: 440 INMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFFRQMKMTLQPNA 498
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY--GCMVDLLGRAGKLKEAYDL 449
IT + L+AC+ G + G H G++ + ++D+ R G++ A++
Sbjct: 499 ITLTAALAACARIGALMCG---KEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQ 555
Query: 450 IEGMKVKADFVVWGSLL 466
K D W LL
Sbjct: 556 FNSQ--KKDVSSWNILL 570
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 122/247 (49%), Gaps = 8/247 (3%)
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
V +GN + + R G++ + VF M E++ +WN ++ YA+ G EA+ ++ +M+
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLW 188
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
VK + T VL + L G+ +H V++ E + V ++I MY KCG V
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVK 248
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
AR F++M +++ SW AMI+GY + E L LF+ M V P+ +T SV+SAC
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACE 308
Query: 403 HAG---LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
G L ++ ++ T G +I + + AG +EA L M K D
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVC----NSLTQMYLYAGSWREAEKLFSRMDCK-DI 363
Query: 460 VVWGSLL 466
V W +++
Sbjct: 364 VSWTTMI 370
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 236/631 (37%), Positives = 351/631 (55%), Gaps = 49/631 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD--LHSGKQ 94
+V SWNS+I D A + F M P RS + S + + + L GK
Sbjct: 72 DVVSWNSMIKGCFDCADLTMARKLFDEM------PERS-----VVSWTTMINGFLQFGKI 120
Query: 95 AHQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
+ + RD+ +++I Y G + D +LF E+P RN++SWTSM+ G Q
Sbjct: 121 EVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMP--CRNVISWTSMIGGLDQ 178
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV--NGVTEGAH 211
+ + EAL LF++ + CG + + + + V++AC+ + GV AH
Sbjct: 179 HGRSEEALGLFRQMM----GCGVEVKPTSSTY------CCVITACANASALYQGVQIHAH 228
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
F + FD+ + LI YA ++ S +VF G + + V W +++ Y N
Sbjct: 229 VFKLGYSFDAYISAA--LITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHE 286
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+AL VF +M++ V N + ++ L + L L G+ IH +K+ LE V VG S+
Sbjct: 287 DALKVFGEMMRE-GVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSL 345
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
I MY +CG ++ F ++ +KN+ SW ++I G H AL F +M+++ V P+
Sbjct: 346 IVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDE 405
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
ITF +LSACSH+G+ Q+G + E ++HY CMVD+LGR+GKL+EA +LI
Sbjct: 406 ITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIR 465
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M VKA+ +VW LL AC +H +++ E AAK + +LEP+ +VLLSN+YA+A RW D
Sbjct: 466 NMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSD 525
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
V R R MK R + K PG S + ++G + FL GD+ HP ++IY+ LE L KL+E+GY
Sbjct: 526 VSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGY 585
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
V D +HDV+ E+KE+ L HSE+LA NLRVCGDCH+ I+L
Sbjct: 586 VPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKL 645
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+K+V R+I+VRDS RFH+F DG CSCGDYW
Sbjct: 646 IAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 180/379 (47%), Gaps = 20/379 (5%)
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
F ++I + + + +AR +FD++ ++ +T M+TGY +N AL LF E
Sbjct: 11 TFSYQSMITDHLRNQRIDEARTVFDKVS--FPDVYLYTMMITGYARNYRFDHALQLFYEM 68
Query: 168 LLEE-----SECGGASENSD----NVFVDSVAIASVLSACSRVT---VNGVTEGAHGFVI 215
+++ S G + +D D + SV+S + + G E A G
Sbjct: 69 PVKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFY 128
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
K F ++ N++I Y G V+ ++F M ++ ++W S+I Q+G + EAL
Sbjct: 129 KMPF-RDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALG 187
Query: 276 VFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+F QM+ +VK + T V+ A A+ L G IH V K+ + ++I
Sbjct: 188 LFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITF 247
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y C Q++ + + F+ NV WTA++ GYG++C+ +AL +F +M++ GV PN +F
Sbjct: 248 YANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSF 307
Query: 395 VSVLSACSHAGLVQEGW-HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
S L++C GL W ++T + +E V ++ + R G L + + + +
Sbjct: 308 TSALNSC--CGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRI 365
Query: 454 KVKADFVVWGSLLGACRIH 472
K + V W S++ C H
Sbjct: 366 S-KKNIVSWNSVIVGCAQH 383
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 88/213 (41%), Gaps = 13/213 (6%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
N N + K + K N+ SWNSVI A+ G + AL F+ M + + P TF +
Sbjct: 354 NLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLS 413
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVS------SALIDMYSKCGELSDARKLFDEIP 135
+CS HSG + F + + ++D+ + G+L +A +L +P
Sbjct: 414 ACS-----HSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMP 468
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+ ++V W +L+ + A K + E C A N++ + + V
Sbjct: 469 VKANSMV-WLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVS 527
Query: 196 SACSRVTVNGVT-EGAHGFVIKRGFDSEVGVGN 227
+ G+T + ++ +G+ +E G+
Sbjct: 528 RIRREMKQRGITKQPGRSWITIKGWRNEFLSGD 560
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 111/294 (37%), Gaps = 55/294 (18%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
++I + R +D +R VFD + D + +I YA+N AL +F +M V
Sbjct: 15 QSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEM----PV 70
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
K V+ S+I C + +ARK
Sbjct: 71 K------------------------------------DVVSWNSMIKGCFDCADLTMARK 94
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F++M E++V SWT MI G+ + A LFYKM + + S++ G
Sbjct: 95 LFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDI----AAWNSMIYGYCCNGR 150
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE-----GMKVKADFVV 461
V++G M V + M+ L + G+ +EA L G++VK
Sbjct: 151 VEDGLRLFQEMPCR-----NVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSST 205
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY-HVLLSNIYANAGRWEDVER 514
+ ++ AC + G +F+L + Y L YAN + ED R
Sbjct: 206 YCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLR 259
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/513 (42%), Positives = 311/513 (60%), Gaps = 54/513 (10%)
Query: 183 NVFVDSVAIASVLSACSRVT--VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+V D+ + VL AC +++ VNG T HG K GF S + + N +++ Y G +
Sbjct: 5 DVLPDTFTCSFVLKACLKLSDVVNGKT--IHGLFQKLGFGSNLFLQNMILNLYGLCGEMG 62
Query: 241 VSRKVFDGMIEKDAVTWN-------------------------------SIIAIYAQNGL 269
+ +F+ M ++DAVTWN S+I+ + Q G
Sbjct: 63 DAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGK 122
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EA+D+F ++ + V+ N VT+ +VL A A LG L LG+ +H+ K + +V V
Sbjct: 123 PNEAIDLFMKL-EDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCN 181
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
++IDMY KCG ++ AR+ F +M+E+ V SW+AMIAG MH +A EAL LF +MIK GV+P
Sbjct: 182 TLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKP 241
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
N +TF+ +L ACSH GL+ EG + +M ++ + P +EHYGC+VDL RAG L+EA++
Sbjct: 242 NGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEF 301
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I M +K + VVWG+LLG C++HKN+DL E A K L EL+P N GY+V++SNIYA A RW
Sbjct: 302 ILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERW 361
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
ED R R LMK+R + KT G+S + + G VH F+ GD+ HPQ E I + ++L VK++
Sbjct: 362 EDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRR 421
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GY + V+ D++++EKE L HSEKLA NLRVC DCH +
Sbjct: 422 GYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAAL 481
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
++IS +V REI+VRD RFH F+DG CSC D+W
Sbjct: 482 KIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 170/355 (47%), Gaps = 54/355 (15%)
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
MR + P T +K+C L D+ +GK H GF ++F+ + ++++Y CGE
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 124 LSDARKLFDEIPQRI-----------------------------RNIVSWTSMLTGYVQN 154
+ DA LF+++PQR +N+ SWTSM++G+VQ
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
EA+ LF + + V + V + SVL+AC+ + + H +
Sbjct: 121 GKPNEAIDLFMKL------------EDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYS 168
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
K GF V V NTLID Y + G ++ +R+VF M E+ V+W+++IA A +G A EAL
Sbjct: 169 TKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEAL 228
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS---- 330
+F +M+K VK N VT +L A +H+G++ G+ M + VI
Sbjct: 229 CLFSEMIK-LGVKPNGVTFIGLLHACSHMGLIDEGRRF---FASMTADYGVIPQIEHYGC 284
Query: 331 IIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
++D++ + G ++ A + M K N W A++ G C+ + +DL + IK
Sbjct: 285 VVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGG----CKVHKNIDLAEEAIK 335
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 23/245 (9%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
NV SW S+I+ + G EA+ F + ++ P T + +C+ L DL G+ H
Sbjct: 106 NVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVH 165
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+ + GF R+V V + LIDMY KCG L +AR++F E+ + R +VSW++M+ G +
Sbjct: 166 EYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEE--RTVVSWSAMIAGLAMHGQ 223
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF--- 213
A EAL LF E + V + V +L ACS + + + EG F
Sbjct: 224 AEEALCLFSEMI------------KLGVKPNGVTFIGLLHACSHMGL--IDEGRRFFASM 269
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA---IYAQNGL 269
G ++ ++D ++R G ++ + + M I+ + V W +++ ++ L
Sbjct: 270 TADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDL 329
Query: 270 AAEAL 274
A EA+
Sbjct: 330 AEEAI 334
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+++ V SW+++IA LA G + EAL FS M KL + P TF + +CS + + G
Sbjct: 203 MEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEG 262
Query: 93 KQAHQQAFI-FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
++ +G + ++D++S+ G L +A + +P + +V W ++L G
Sbjct: 263 RRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVV-WGALLGG 320
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 247/664 (37%), Positives = 365/664 (54%), Gaps = 45/664 (6%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
S +++++ KHS +F++ + + ++ S+N++IA A G+ LR F +R+L
Sbjct: 77 SYNTLINAYAKHSLIHIARRVFDE-IPQPDIVSYNTLIAAYADRGECGPTLRLFEEVREL 135
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
L T I +C D+ +Q H + G V++A++ YS+ G LS+A
Sbjct: 136 RLGLDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEA 193
Query: 128 RKLFDEIPQRI-RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
R++F E+ + R+ VSW +M+ Q+ EA+ LF+E + + V
Sbjct: 194 RRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMV------------RRGLKV 241
Query: 187 DSVAIASVLSA--CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR-GGHVDVSR 243
D +ASVL+A C + V G HG +IK GF VG+ LID Y++ G + R
Sbjct: 242 DMFTMASVLTAFTCVKDLVGG--RQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECR 299
Query: 244 KVFDGMIEKDAVTWNSIIAIYA-QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
KVF+ + D V WN++I+ ++ L+ + L F +M + + + + V A ++
Sbjct: 300 KVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREM-QRNGFRPDDCSFVCVTSACSN 358
Query: 303 LGVLRLGKCIHDQVIKMDLE-ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
L LGK +H IK D+ V V +++ MY KCG V AR+ F+ M E N S +
Sbjct: 359 LSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNS 418
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MIAGY H E+L LF M++ + PN ITF++VLSAC H G V+EG + N M F
Sbjct: 419 MIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERF 478
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
IEP EHY CM+DLLGRAGKLKEA +IE M + W +LLGACR H NV+L A
Sbjct: 479 CIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKA 538
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
A + LEP N +V+LSN+YA+A RWE+ + LM+ R + K PG S +E+ KVH
Sbjct: 539 ANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHV 598
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVI---HDVDQEEKEMTLRIHSEKL 598
F+ D HP ++I+ Y+ ++ K+++ GYV D+ + +V+ +E+E L HSEKL
Sbjct: 599 FVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKL 658
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLR+CGDCH ++LIS + REI VRD+ RFH FK+G CSC
Sbjct: 659 AVAFGLISTEEGVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSC 718
Query: 641 GDYW 644
DYW
Sbjct: 719 RDYW 722
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 222/495 (44%), Gaps = 75/495 (15%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD-------- 126
TF +K+C A DL +GK H F ++S+ +YSKCG L +
Sbjct: 11 TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70
Query: 127 -----------------------ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLL 163
AR++FDEIPQ +IVS+ +++ Y L L
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQ--PDIVSYNTLIAAYADRGECGPTLRL 128
Query: 164 FKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEV 223
F+E + E G +D ++ V++AC G+ H FV+ G D
Sbjct: 129 FEE--VRELRLG----------LDGFTLSGVITACGDDV--GLVRQLHCFVVVCGHDCYA 174
Query: 224 GVGNTLIDAYARGGHVDVSRKVFDGMIE---KDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
V N ++ Y+R G + +R+VF M E +D V+WN++I Q+ EA+ +F +M
Sbjct: 175 SVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREM 234
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC-G 339
V+ +K + T+++VL A + L G+ H +IK + VG+ +ID+Y KC G
Sbjct: 235 VRR-GLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAG 293
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE-ALDLFYKMIKAGVRPNYITFVSVL 398
+ RK F ++ ++ W MI+G+ ++ E L F +M + G RP+ +FV V
Sbjct: 294 SMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVT 353
Query: 399 SACSHAGLVQEGWHWLNTMGHEFNIEPGVEH-----YGCMVDLLGRAGKLKEAYDLIEGM 453
SACS+ L H I+ V + +V + + G + +A + + M
Sbjct: 354 SACSNLSSPS-----LGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTM 408
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL------EPNNCGYHVLLSNIYANAG 507
+ + V S++ H E+ + +LFEL PN+ + +LS + G
Sbjct: 409 P-EHNTVSLNSMIAGYAQHGV----EVESLRLFELMLEKDIAPNSITFIAVLSAC-VHTG 462
Query: 508 RWEDVERTRSLMKNR 522
+ E+ ++ ++MK R
Sbjct: 463 KVEEGQKYFNMMKER 477
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 233/629 (37%), Positives = 348/629 (55%), Gaps = 45/629 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD--LHSGKQ 94
+V SWNS+I D A + F M P RS + S + + + L GK
Sbjct: 56 DVVSWNSMIKGCFDCADLTMARKLFDEM------PERS-----VVSWTTMINGFLQFGKI 104
Query: 95 AHQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
+ + RD+ +++I Y G + D +LF E+P RN++SWTSM+ G Q
Sbjct: 105 EVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMP--CRNVISWTSMIGGLDQ 162
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+ + EAL LF++ + CG + + + + V++AC+ + H
Sbjct: 163 HGRSEEALGLFRQMM----GCGVEVKPTSSTY------CCVITACANASALYQGVQIHAH 212
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
V K G+ + + LI YA ++ S +VF G + + V W +++ Y N +A
Sbjct: 213 VFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDA 272
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L VF +M++ V N + ++ L + L L G+ IH +K+ LE V VG S+I
Sbjct: 273 LKVFGEMMRE-GVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIV 331
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY +CG ++ F ++ +KN+ SW ++I G H AL F +M+++ V P+ IT
Sbjct: 332 MYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEIT 391
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
F +LSACSH+G+ Q+G + E ++HY CMVD+LGR+GKL+EA +LI M
Sbjct: 392 FTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNM 451
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
VKA+ +VW LL AC +H +++ E AAK + +LEP+ +VLLSN+YA+A RW DV
Sbjct: 452 PVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVS 511
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
R R MK R + K PG S + ++G + FL GD+ HP ++IY+ LE L KL+E+GYV
Sbjct: 512 RIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVP 571
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
D +HDV+ E+KE+ L HSE+LA NLRVCGDCH+ I+LI+
Sbjct: 572 DQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIA 631
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
K+V R+I+VRDS RFH+F DG CSCGDYW
Sbjct: 632 KIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 174/363 (47%), Gaps = 20/363 (5%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE-----SECGGAS 178
+ +AR +FD++ ++ +T M+TGY +N AL LF E +++ S G
Sbjct: 11 IDEARTVFDKVS--FPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCF 68
Query: 179 ENSD----NVFVDSVAIASVLSACSRVT---VNGVTEGAHGFVIKRGFDSEVGVGNTLID 231
+ +D D + SV+S + + G E A G K F ++ N++I
Sbjct: 69 DCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPF-RDIAAWNSMIY 127
Query: 232 AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK-STDVKCNA 290
Y G V+ ++F M ++ ++W S+I Q+G + EAL +F QM+ +VK +
Sbjct: 128 GYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTS 187
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
T V+ A A+ L G IH V K+ + ++I Y C Q++ + + F+
Sbjct: 188 STYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHG 247
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
NV WTA++ GYG++C+ +AL +F +M++ GV PN +F S L++C GL
Sbjct: 248 KLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSC--CGLEALD 305
Query: 411 W-HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
W ++T + +E V ++ + R G L + + + + K + V W S++ C
Sbjct: 306 WGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWNSVIVGC 364
Query: 470 RIH 472
H
Sbjct: 365 AQH 367
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 32/265 (12%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
+I + R +D +R VFD + D + +I YA+N AL +F +M V
Sbjct: 1 MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSW 60
Query: 289 NAVT---------------------LSAVLLAIAHLGVLRLGK--CIHDQVIKMDLEESV 325
N++ S V G L+ GK KM + +
Sbjct: 61 NSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRD-I 119
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
S+I YC G+V+ + F +M +NV SWT+MI G H R+ EAL LF +M+
Sbjct: 120 AAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGC 179
Query: 386 G--VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY--GCMVDLLGRAG 441
G V+P T+ V++AC++A + +G + H F + + Y ++
Sbjct: 180 GVEVKPTSSTYCCVITACANASALYQG---VQIHAHVFKLGYSFDAYISAALITFYANCK 236
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLL 466
+++++ + G K+ + V+W +L+
Sbjct: 237 QMEDSLRVFHG-KLHMNVVIWTALV 260
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 88/213 (41%), Gaps = 13/213 (6%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
N N + K + K N+ SWNSVI A+ G + AL F+ M + + P TF +
Sbjct: 338 NLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLS 397
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVS------SALIDMYSKCGELSDARKLFDEIP 135
+CS HSG + F + + ++D+ + G+L +A +L +P
Sbjct: 398 ACS-----HSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMP 452
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+ ++V W +L+ + A K + E C A N++ + + V
Sbjct: 453 VKANSMV-WLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVS 511
Query: 196 SACSRVTVNGVT-EGAHGFVIKRGFDSEVGVGN 227
+ G+T + ++ +G+ +E G+
Sbjct: 512 RIRREMKQRGITKQPGRSWITIKGWRNEFLSGD 544
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/651 (35%), Positives = 349/651 (53%), Gaps = 45/651 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSAL 86
+F D+N V SW +++ + GD+ LR MR S P T ++K+C
Sbjct: 274 VFGGMRDRN-VVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVT 332
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D+ +G H G+ V+S+L+ +YSK G + DAR++FD R + +W +
Sbjct: 333 EDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFD-CAGLGRGLATWNA 391
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M++GY + R+ALL+F+E + D D AS+L AC +
Sbjct: 392 MISGYAHAGHGRDALLVFREMRRR------RRRHEDQHQPDEFTFASLLKACG--GLGAP 443
Query: 207 TEGA--HGFVIKRGFD--SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
EGA H + GF S + L+D Y + G + V+ +VF+ + K+A+ W +++
Sbjct: 444 REGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVV 503
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
+AQ G EAL++F + +S + +A LS+++ +A ++ G+ +H +K
Sbjct: 504 GHAQEGQVMEALELFRRFWRS-GARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAG 562
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
V G SI+DMY KCG D A + F ++ +NV SWT MI G G H REA+ +F +M
Sbjct: 563 TDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEM 622
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
GV P+ +T++++LSACSHAGLV E + + + + + P EHY CMVDLLGRAG+
Sbjct: 623 RAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGE 682
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
L+EA DLI M ++ VW +LL ACR+HK+V +G A L ++ +N +V LSN+
Sbjct: 683 LREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNV 742
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE--HPQHEKIYEYLE 560
+A AG W + + R M+ R L K G S VE+ +VH F G E HPQ I L
Sbjct: 743 FAEAGAWRECHKVRDAMRRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLR 802
Query: 561 ELNVKLQE-VGYVT-DMTSVIHDVDQEEKEMTLRIHSEKLA------------------- 599
++ +++E +GY D+ +HDVD+E + +LR HSE+LA
Sbjct: 803 DVETRVREQLGYCADDVQFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGGGHRQ 862
Query: 600 ------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH + +S VV R +VVRD+ RFH F+ G CSC DYW
Sbjct: 863 PIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGTCSCKDYW 913
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/552 (25%), Positives = 250/552 (45%), Gaps = 71/552 (12%)
Query: 28 LFNKYVDKNNVFSWNSVIADLA------RGGDSVEALRAFSSMRKLSLT-PTRSTF-PCA 79
LF KY DK +++S +++ +L RG +V+ L+ + L + P ST P
Sbjct: 133 LFQKYDDKVDMWSIGAILFELLNGYPPFRGRSNVQLLQCINRSTSLPFSEPLASTLHPDC 192
Query: 80 IKSCSAL-------------------------------HDLHSGKQAHQQAFIFGFHRDV 108
+ C+ L L G Q H GF D
Sbjct: 193 VDICTRLLCTNPVAFPFPTNPMERRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDT 252
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL 168
+ + LIDMY+KCGEL A ++F + R RN+VSWT+++ G++Q+ +A L L E
Sbjct: 253 MLGNNLIDMYAKCGELDMAGEVFGGM--RDRNVVSWTALMVGFLQHGDATGCLRLLGEMR 310
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
ASE + N + +++ L AC G G HG ++ G++ V ++
Sbjct: 311 -------AASEAAPNEYT----LSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASS 359
Query: 229 LIDAYARGGHVDVSRKVFD-GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV- 286
L+ Y++GG + +R+VFD + + TWN++I+ YA G +AL VF +M +
Sbjct: 360 LVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRH 419
Query: 287 ----KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES--VIVGTSIIDMYCKCGQ 340
+ + T +++L A LG R G +H + + I+ +++DMY KCG+
Sbjct: 420 EDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGR 479
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+ +A + F +++ KN WT ++ G+ + EAL+LF + ++G R + S++
Sbjct: 480 LPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGV 539
Query: 401 CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
+ LV++G ++ G + V +VD+ + G EA + + + + V
Sbjct: 540 LADFALVEQG-RQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPAR-NVV 597
Query: 461 VWGSLLGACRIHKNVDLGEIAAKKLFEL-----EPNNCGYHVLLSNIYANAGRWEDVERT 515
W +++ H LG A E+ EP+ Y LLS ++AG ++ R
Sbjct: 598 SWTTMINGLGKH---GLGREAVAMFEEMRAGGVEPDEVTYLALLSAC-SHAGLVDECRRY 653
Query: 516 RSLMKNRRLAKT 527
S ++ R +
Sbjct: 654 FSCIRRDRTVRP 665
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/644 (36%), Positives = 358/644 (55%), Gaps = 99/644 (15%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALI------DMYSKCGELSDARK 129
FP I +C + DL Q H G RD ++ ++ D++ + +L A K
Sbjct: 27 FP-QINNCRTIRDL---SQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHK 80
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNARE--ALLLFKEFLLEESECGGASENSDNVFVD 187
+F+++PQR N SW +++ G+ ++D + A+ LF E + +E V +
Sbjct: 81 IFNQMPQR--NCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEF-----------VEPN 127
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGF---------------------------- 219
SVL AC++ + HG +K GF
Sbjct: 128 RFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFY 187
Query: 220 -----------------DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
D E+ + N +ID Y R G +R +FD M ++ V+WN++I+
Sbjct: 188 KNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMIS 247
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH----DQVIK 318
Y+ NG +A++VF +M K D++ N VTL +VL AI+ LG L LG+ +H D I+
Sbjct: 248 GYSLNGFFKDAVEVFREM-KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIR 306
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
+D ++G+++IDMY KCG ++ A F ++ +NV +W+AMI G+ +H +A +A+D
Sbjct: 307 ID----DVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDC 362
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
F KM +AGVRP+ + ++++L+ACSH GLV+EG + + M +EP +EHYGCMVDLLG
Sbjct: 363 FCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLG 422
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVL 498
R+G L EA + I M +K D V+W +LLGACR+ NV++G+ A L ++ P++ G +V
Sbjct: 423 RSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVA 482
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEY 558
LSN+YA+ G W +V R MK + + K PG SL+++ G +H F+V D HP+ ++I
Sbjct: 483 LSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSM 542
Query: 559 LEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------N 600
L E++ KL+ GY T V+ ++++E+KE L HSEK+A N
Sbjct: 543 LVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKN 602
Query: 601 LRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
LR+C DCH+ I+LISKV R+I VRD KRFH+F+DG CSC DYW
Sbjct: 603 LRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 40/379 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRA----FSSMRKLSLTPTRSTFPCAIKSC 83
+FN+ + + N FSWN++I + D +AL A + M + P R TFP +K+C
Sbjct: 81 IFNQ-MPQRNCFSWNTIIRGFSE-SDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKAC 138
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLF------------ 131
+ + GKQ H A +GF D FV S L+ MY CG + DAR LF
Sbjct: 139 AKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVM 198
Query: 132 DEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF----------LLEESECGGASENS 181
+ +R IV W M+ GY++ + + A +LF + ++ G +++
Sbjct: 199 TDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDA 258
Query: 182 DNVF---------VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
VF + V + SVL A SR+ + E H + G + +G+ LID
Sbjct: 259 VEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDM 318
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
Y++ G ++ + VF+ + ++ +TW+++I +A +G A +A+D F +M + V+ + V
Sbjct: 319 YSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM-RQAGVRPSDVA 377
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
+L A +H G++ G+ Q++ +D LE + ++D+ + G +D A + M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 352 KEK-NVRSWTAMIAGYGMH 369
K + W A++ M
Sbjct: 438 PIKPDDVIWKALLGACRMQ 456
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 146/335 (43%), Gaps = 60/335 (17%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K + + +V SWN++I+ + G +A+ F M+K + P T + + S L
Sbjct: 230 LFDK-MRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLG 288
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+ H A G D + SALIDMYSKCG + A +F+ +P+ N+++W++M
Sbjct: 289 SLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR--ENVITWSAM 346
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + A +A+ F + V VA ++L+ACS
Sbjct: 347 INGFAIHGQAGDAIDCFCKM------------RQAGVRPSDVAYINLLTACS-------- 386
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT-----WNSIIA 262
GG V+ R+ F M+ D + + ++
Sbjct: 387 ---------------------------HGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVD 419
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
+ ++GL EA ++ + + +K + V A+L A G + +GK + + ++ M
Sbjct: 420 LLGRSGLLDEA----EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPH 475
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
+S ++ +MY G + +MKEK++R
Sbjct: 476 DSGAY-VALSNMYASQGNWSEVSEMRLRMKEKDIR 509
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/633 (35%), Positives = 353/633 (55%), Gaps = 37/633 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K ++ + SWN++I+ + +E L F MR+LS+ P T I +C L
Sbjct: 192 LFDKMPTRDRI-SWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLG 250
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G Q H + ++ V ++LI MY G +A +F + R++VSWT++
Sbjct: 251 DERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGM--ECRDVVSWTTI 308
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G V N +AL +K + D V IASVLSAC+ + +
Sbjct: 309 ISGCVDNLLPDKALETYKTMEIT------------GTMPDEVTIASVLSACASLGQLDMG 356
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H + G V V N+LID Y++ ++ + ++F + +KD ++W S+I N
Sbjct: 357 MKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRIN 416
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
EAL F +M+ + K N+VTL + L A A +G L GK IH +K + +
Sbjct: 417 NRCFEALIFFRKMILKS--KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFL 474
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+I+D+Y +CG++ A FN + EK+V +W ++ GY + ++LF +M+++ +
Sbjct: 475 PNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEI 533
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ +TF+S+L ACS +G+V EG + M ++I P ++HY C+VDLLGRAGKL EA+
Sbjct: 534 NPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAH 593
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ IE M +K D +WG+LL ACRIH++V LGE+AA+ +F+ + + GY++LL N+YA++G
Sbjct: 594 EFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSG 653
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+W++V + R MK L PG S VE++GKVHAFL GD HPQ ++I LE K++
Sbjct: 654 KWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMK 713
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
G+ S + + Q K HSE+ A NL +C CH+
Sbjct: 714 TSGFNGQECSSMDGI-QTSKADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHS 772
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
++ ISK+V REI VRD+++FH+FKDGLCSCGD
Sbjct: 773 TVKFISKIVRREISVRDTEQFHHFKDGLCSCGD 805
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 220/416 (52%), Gaps = 21/416 (5%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ ++FSWN ++ + G EAL + + + P TFP ++SC+ DL G++
Sbjct: 97 ERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGRE 156
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H F F DV V +ALI MY KCG++ AR LFD++P R R +SW +M++GY +N
Sbjct: 157 VHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDR--ISWNAMISGYFEN 214
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
D E L LF F + E ++ D + + SV+SAC + + H +V
Sbjct: 215 DECLEGLELF--FRMREL----------SIDPDLMTMTSVISACELLGDERLGTQLHSYV 262
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
++ +D + V N+LI Y GH + VF GM +D V+W +II+ N L +AL
Sbjct: 263 VRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKAL 322
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+ + M + T + VT+++VL A A LG L +G +H+ + V+V S+IDM
Sbjct: 323 ETYKTM-EITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDM 381
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y KC +++ A + F+Q+ +K+V SWT++I G ++ R EAL F KMI +PN +T
Sbjct: 382 YSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTL 440
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY--GCMVDLLGRAGKLKEAYD 448
+S LSAC+ G + G H G + + ++DL R G+++ A +
Sbjct: 441 ISALSACARVGALMCG---KEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALN 493
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 129/251 (51%), Gaps = 11/251 (4%)
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
V +GN L+ + R G V + VF M E+D +WN ++ Y + G EAL ++ +++
Sbjct: 69 VRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILW 128
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
+ ++ + T +VL + A L G+ +H V++ D + V V ++I MY KCG V
Sbjct: 129 A-GIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVV 187
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
AR F++M ++ SW AMI+GY + E L+LF++M + + P+ +T SV+SAC
Sbjct: 188 SARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACE 247
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
G + L T H + + + Y ++ + G KEA + GM+ + D
Sbjct: 248 LLGDER-----LGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECR-D 301
Query: 459 FVVWGSLLGAC 469
V W +++ C
Sbjct: 302 VVSWTTIISGC 312
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
SV +G +++ M+ + G V A F +M E+++ SW ++ GY EAL L+++++
Sbjct: 68 SVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRIL 127
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
AG+RP+ TF SVL +C+ A + G ++ F+ + V+ ++ + + G +
Sbjct: 128 WAGIRPDVYTFPSVLRSCAGAMDLVRGRE-VHAHVVRFDFDMDVDVVNALITMYVKCGDV 186
Query: 444 KEAYDLIEGMKVKADFVVWGSLL 466
A L + M + D + W +++
Sbjct: 187 VSARMLFDKMPTR-DRISWNAMI 208
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/628 (35%), Positives = 354/628 (56%), Gaps = 38/628 (6%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD-LHSGKQ 94
NVFSW +I A+ G S EAL F M K + P +F AI +CSA + L +G+
Sbjct: 98 KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRA 157
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H +GF V +++L+ MYSKCG L ++ K F+ + + N VSW +M+ + ++
Sbjct: 158 LHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTEL--NAVSWNAMIAAFAEH 215
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
EAL ++ LE + SV +++SA + + H +
Sbjct: 216 RRGLEALRTLQKMFLE------------GIRACSVTYITLMSAYDQPSQLKSARYIHDCI 263
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
++ GFD +V N +++ Y + G + + +F M + D + WN++IA Y+Q+G +EAL
Sbjct: 264 LRTGFDQDVV--NVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEAL 321
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
F ++++ V + T +V+ A A LG + +GK +H ++ + + + S+++M
Sbjct: 322 R-FYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTEL-ANSLVNM 379
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
Y KCG +D+AR F++ + +V +W AMI Y H ++A +LF M G P+YITF
Sbjct: 380 YGKCGILDVARSIFDKTAKGSV-TWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITF 438
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
+SVLSAC++AGL +E + M + + PG HYGCMV+ LG+AG+L +A LI+GM
Sbjct: 439 MSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMP 498
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
+ D + W S L CR H ++ G+ AAK ++P +V L+ I+A+AG +++ R
Sbjct: 499 FEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASR 558
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTD 574
R LM +R + K G S+++L V+ F GD+ +P+ ++I++ L+ L+ +++ GY D
Sbjct: 559 IRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPD 618
Query: 575 MTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISK 616
MT V HDV+ +KE L HSE+LA NLRVCGDCH + +L SK
Sbjct: 619 MTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQGTPLRIMKNLRVCGDCHAMTKLTSK 678
Query: 617 VVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ REI+VRDS RFH+FK+G CSC D+W
Sbjct: 679 ITRREIIVRDSNRFHHFKNGSCSCKDFW 706
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 214/441 (48%), Gaps = 35/441 (7%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
I+SC+ L L G++ HQ G DV+VS+ L+ MY KCG L +AR +F+ P +
Sbjct: 41 IQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPA--K 98
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+ SWT ++T Q+ ++EAL LF E L + SV+ + ++ACS
Sbjct: 99 NVFSWTILITVCAQHGRSQEALALFYEML------------KQGIQPHSVSFTAAINACS 146
Query: 200 R-VTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
H + + GF V +L+ Y++ G ++ S K F+ M E +AV+WN
Sbjct: 147 AGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWN 206
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
++IA +A++ EAL +M C+ VT ++ A L+ + IHD +++
Sbjct: 207 AMIAAFAEHRRGLEALRTLQKMFLEGIRACS-VTYITLMSAYDQPSQLKSARYIHDCILR 265
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
++ V+ I++MY KCG + A F M + +V +W MIA Y H EAL
Sbjct: 266 TGFDQDVV--NVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRF 323
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG-HEFNIEPGVEHYGCMVDLL 437
+ M + GV P+ T+VSV+ AC+ G ++ G +G F + E +V++
Sbjct: 324 YELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQV---TELANSLVNMY 380
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL------EPN 491
G+ G L A + + K V W +++GA H + E A +LF L EP+
Sbjct: 381 GKCGILDVARSIFD--KTAKGSVTWNAMIGAYAQHSH----EQQAFELFLLMRLDGEEPS 434
Query: 492 NCGYHVLLSNIYANAGRWEDV 512
+ +LS ANAG E+
Sbjct: 435 YITFMSVLSAC-ANAGLPEEA 454
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 152/298 (51%), Gaps = 14/298 (4%)
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
V+ +C+R+ H + + G S+V V N L+ Y + G ++ +R VF+ K+
Sbjct: 40 VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI-AHLGVLRLGKCI 312
+W +I + AQ+G + EAL +F +M+K ++ ++V+ +A + A A L G+ +
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQ-GIQPHSVSFTAAINACSAGPEFLPAGRAL 158
Query: 313 HDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
H + + +++V+ TS++ MY KCG ++ + K F M E N SW AMIA + H R
Sbjct: 159 HALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRG 218
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH--Y 430
EAL KM G+R +T+++++SA ++ + H+ + G +
Sbjct: 219 LEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYI-----HDCILRTGFDQDVV 273
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
++++ G+ G L++A + + M + D + W +++ A H + A + +EL
Sbjct: 274 NVILNMYGKCGCLQDAEAMFKSMS-QPDVIAWNTMIAAYSQHGHTS----EALRFYEL 326
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 6/216 (2%)
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
+++++ Q G A A+D Q K D+K V+ + A LG L G+ IH +
Sbjct: 7 STLLSKRQQLGQIAAAIDAL-QKRKDADLK----ECVRVIQSCARLGALAEGRRIHQLIR 61
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
++ L V V ++ MY KCG ++ AR F KNV SWT +I H R++EAL
Sbjct: 62 RVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALA 121
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
LFY+M+K G++P+ ++F + ++ACS L+ + + + V +V +
Sbjct: 122 LFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMY 181
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
+ G L+E+ E M + + V W +++ A H+
Sbjct: 182 SKCGSLEESVKTFESM-TELNAVSWNAMIAAFAEHR 216
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 115/237 (48%), Gaps = 24/237 (10%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + + +V +WN++IA ++ G + EALR + M++ + P T+ I +C+ L D+
Sbjct: 294 KSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDME 353
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
GKQ H++ F +S L++MY KCG L AR +FD+ + V+W +M+
Sbjct: 354 VGKQVHRRLGDRAFQVTELANS-LVNMYGKCGILDVARSIFDKTA---KGSVTWNAMIGA 409
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y Q+ + ++A LF L+ E + SVLSAC+ G+ E A
Sbjct: 410 YAQHSHEQQAFELFLLMRLDGEE------------PSYITFMSVLSACANA---GLPEEA 454
Query: 211 HGFVIKRGFDSEVGVG----NTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
H + + D V G ++++ + G + + + GM E D +TW S +A
Sbjct: 455 HSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLA 511
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/474 (44%), Positives = 290/474 (61%), Gaps = 23/474 (4%)
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
AS+L +C + H V GF + + L++ Y + +R +FD + +
Sbjct: 79 ASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK 138
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
+ WN +I YA NG A+ ++ QM V N T VL A A L + G+
Sbjct: 139 HNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDN-FTFPFVLKACAALSAIEHGRE 197
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN---VRSWTAMIAGYGM 368
IH+ V++ E+ V VG ++IDMY KCG V AR+ F+++ ++ V SW AMI GY M
Sbjct: 198 IHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAM 257
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H A EALDLF +M + +P++ITFV VLSACSH GL++EGW + TM ++ I+P V+
Sbjct: 258 HGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQ 316
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HY CMVDLLG +G+L EAY+LI MKV D VWG+LL +C+IH NV+LGEIA ++L EL
Sbjct: 317 HYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIEL 376
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
EP++ G +V+LSNIYA AG+WE V + R LM +RRL K+ S +E++ KVHAFL GD
Sbjct: 377 EPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTS 436
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
HP ++IY LE + ++E GY SV HDV+ +EK + HSE+LA
Sbjct: 437 HPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTP 496
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH I+ ISK+ +REI VRD R+H+FKDG+CSCGDYW
Sbjct: 497 PGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 550
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 182/375 (48%), Gaps = 29/375 (7%)
Query: 2 KLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
KL + S S++ S + T +L +Y N F+ S ++A+ +
Sbjct: 8 KLKRPSPCSALSSLLKP----TFFASLSLQYQSPNPSFT--SSAPQFDNNQTHLKAIPSC 61
Query: 62 SSMRKLS--LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
S+ S LTPT S + ++SC A + GKQ H Q + GF D +++ L+++Y
Sbjct: 62 SNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYC 121
Query: 120 KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
C LS AR LFD IP+ NI W ++ GY N A+ L+ +
Sbjct: 122 VCDSLSSARLLFDRIPK--HNIFLWNVLIRGYAWNGPYEAAVQLYYQMF----------- 168
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
+ D+ VL AC+ ++ H V++ G++ +V VG LID YA+ G V
Sbjct: 169 -DYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCV 227
Query: 240 DVSRKVFDGMIEKDA---VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
+R+VFD ++ +DA V+WN++I YA +G A EALD+F++M + K + +T V
Sbjct: 228 GSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVA--KPDHITFVGV 285
Query: 297 LLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE-K 354
L A +H G+L G + +I+ ++ +V T ++D+ G++D A QMK
Sbjct: 286 LSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLP 345
Query: 355 NVRSWTAMIAGYGMH 369
+ W A++ +H
Sbjct: 346 DSGVWGALLNSCKIH 360
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 149/311 (47%), Gaps = 33/311 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + K+N+F WN +I A G A++ + M L P TFP +K+C+AL
Sbjct: 132 LFDR-IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN---IVSW 144
+ G++ H+ G+ +DVFV +ALIDMY+KCG + AR++FD+I +R+ +VSW
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKI--LVRDAVLVVSW 248
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
+M+TGY + +A EAL LF+E + D + VLSACS
Sbjct: 249 NAMITGYAMHGHATEALDLFEEM-------------NRVAKPDHITFVGVLSACSH---G 292
Query: 205 GVTEGAHGF----VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNS 259
G+ E F + D V ++D G +D + + M + D+ W +
Sbjct: 293 GLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGA 352
Query: 260 II---AIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL-GVLRLGKCIHDQ 315
++ I+A L AL+ ++ D N V LS + GV +L K + D+
Sbjct: 353 LLNSCKIHANVELGEIALERLIEL--EPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDR 410
Query: 316 VIKMDLEESVI 326
+K + S I
Sbjct: 411 RLKKSIACSWI 421
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/611 (35%), Positives = 347/611 (56%), Gaps = 40/611 (6%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P+R T + + SAL D G+Q H Q GF F S L+DMY+K G + DA+++
Sbjct: 147 PSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRV 206
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES-----ECGGASEN----- 180
FDE+ ++N+V + +M+TG ++ EA +F+ + +S G ++N
Sbjct: 207 FDEM--VVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSE 264
Query: 181 ---------SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLID 231
++ V +D S+L+AC + + + H + I+ +D + VG+ L+D
Sbjct: 265 ALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVD 324
Query: 232 AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
Y++ + ++ VF M K+ ++W ++I Y QNG EA+ VF +M ++ +K N
Sbjct: 325 MYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEM-QTDGIKPNDF 383
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
TL +V+ + A+L L G H + L + V ++++ +Y KCG ++ A + F++M
Sbjct: 384 TLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEM 443
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
+ S+TA+++GY +A+E +DLF KM+ GV+PN +TF+ VLSACS +GLV++G
Sbjct: 444 PFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGC 503
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
+ ++M + I +HY CM+DL R+G+LKEA + I M D + W +LL ACR+
Sbjct: 504 SYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRL 563
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFS 531
++++G+ AA+ L + +P N +VLL +++A+ G W +V R M++R++ K PG S
Sbjct: 564 RGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCS 623
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTL 591
++ + +VH F D+ HP IYE L+ LN K+ E GY D++SV+HDV EK L
Sbjct: 624 WIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHML 683
Query: 592 RIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF 633
HSEKLA NLRVC DCH + ISK+ R+I+VRD+ RFH F
Sbjct: 684 SNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKF 743
Query: 634 KDGLCSCGDYW 644
+G+CSCGD+W
Sbjct: 744 SNGICSCGDFW 754
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 208/422 (49%), Gaps = 33/422 (7%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
++F +AL+ + L D +LF +PQ R+ VS+ +++ G+ A ++
Sbjct: 75 NLFTRNALLSALAHARLLPDMDRLFASMPQ--RDAVSYNALIAGFSGAGAPARAAGAYRA 132
Query: 167 FLLEESECGGASENSDNVFVDSVAIAS------VLSACSRVTVNGVTEGAHGFV------ 214
L EE+ GA + + + +A+ L + + GA+ F
Sbjct: 133 LLREEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVD 192
Query: 215 ----------IKRGFD----SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSI 260
KR FD V + NT+I R V+ +R VF+ M+++D++TW ++
Sbjct: 193 MYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTM 252
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
+ QNGL +EALDVF +M ++ V + T ++L A L GK IH I+
Sbjct: 253 VTGLTQNGLQSEALDVFRRM-RAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTL 311
Query: 321 LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
+ ++ VG++++DMY KC + LA F +M KN+ SWTAMI GYG + EA+ +F
Sbjct: 312 YDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFS 371
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+M G++PN T SV+S+C++ ++EG + + M + P + +V L G+
Sbjct: 372 EMQTDGIKPNDFTLGSVISSCANLASLEEGAQF-HCMALVSGLRPYITVSSALVTLYGKC 430
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLL-GACRIHKNVDLGEIAAKKLFE-LEPNNCGYHVL 498
G +++A+ L + M D V + +L+ G + K + ++ K L + ++PN + +
Sbjct: 431 GSIEDAHRLFDEMPFH-DQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGV 489
Query: 499 LS 500
LS
Sbjct: 490 LS 491
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 179/358 (50%), Gaps = 32/358 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F VD++++ +W +++ L + G EAL F MR + + TF + +C AL
Sbjct: 237 VFEAMVDRDSI-TWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALA 295
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
GKQ H + ++FV SAL+DMYSKC + A +F + +NI+SWT+M
Sbjct: 296 ASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRM--TCKNIISWTAM 353
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY QN EA+ +F E +D + + + SV+S+C+ + +
Sbjct: 354 IVGYGQNGCGEEAVRVFSEM------------QTDGIKPNDFTLGSVISSCANLA--SLE 399
Query: 208 EGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
EGA H + G + V + L+ Y + G ++ + ++FD M D V++ ++++ YA
Sbjct: 400 EGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYA 459
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q G A E +D+F++M+ VK N VT VL A + G++ G C + ++ D +
Sbjct: 460 QFGKAKETIDLFEKMLLK-GVKPNGVTFIGVLSACSRSGLVEKG-CSYFHSMQQD--HGI 515
Query: 326 IV----GTSIIDMYCKCGQVDLARKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDL 378
++ T +ID+Y + G++ A + QM + W +++ CR R +++
Sbjct: 516 VLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSA----CRLRGDMEI 569
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 68/254 (26%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
V N L+ AYAR G + ++R++FD M + + T N++++ A L + +F M +
Sbjct: 47 VLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMPQRD 106
Query: 285 DVKCNA-------------------------------------VTLSAVLLAIAHLGVLR 307
V NA +T+S +++A + LG
Sbjct: 107 AVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALGDRA 166
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR---------- 357
LG+ +H Q++++ + ++DMY K G + A++ F++M KNV
Sbjct: 167 LGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLL 226
Query: 358 ---------------------SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
+WT M+ G + EALD+F +M GV + TF S
Sbjct: 227 RCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGS 286
Query: 397 VLSACSHAGLVQEG 410
+L+AC +EG
Sbjct: 287 ILTACGALAASEEG 300
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/644 (35%), Positives = 344/644 (53%), Gaps = 87/644 (13%)
Query: 70 TPTRSTFPCAI-KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--YSKCGELSD 126
+P P ++ ++C +++ L KQ H + G + + + ++ + G++
Sbjct: 10 SPVTENPPLSLFETCKSMYHL---KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCY 66
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
AR+LFD IP+ ++ SW M GY + + + L+ E L NV
Sbjct: 67 ARQLFDTIPEP--SVFSWNIMFKGYSRIACPKLGVSLYLEML------------ERNVKP 112
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY--------ARG-- 236
D + +R + H V+K G DS V N LI+ Y ARG
Sbjct: 113 DCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIF 172
Query: 237 --------------------------------------GHVDVSRKVFDGMIEKDAVTWN 258
G VD +RK F M E+D V+W
Sbjct: 173 DMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWT 232
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
++I Y + EAL +F +M +++ +K + T+ +VL A A LG L LG+ I + K
Sbjct: 233 AMIDGYLRLNCYKEALMLFREM-QTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDK 291
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
++ VG ++IDMY KCG V++A FN + +++ +WTAM+ G ++ EAL++
Sbjct: 292 NKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNM 351
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
F +M+KA V P+ +T+V VLSAC+H G+V EG + +M IEP + HYGCMVDLLG
Sbjct: 352 FSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLG 411
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVL 498
+AG LKEA+++I+ M +K + +VWG+LLGACRIHK+ ++ E A +++ ELEPNN +VL
Sbjct: 412 KAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVL 471
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEY 558
NIYA +W+ + R +M +R + KTPG SL+E+ G VH F+ GD+ HPQ ++IY
Sbjct: 472 QCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGK 531
Query: 559 LEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------N 600
L ++ L+ GY + + V D+ +E+KE + HSEKLA N
Sbjct: 532 LNKMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKN 591
Query: 601 LRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
LR+C DCH V +L+SKV DRE++VRD RFH+F+ G CSC DYW
Sbjct: 592 LRMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRHGSCSCKDYW 635
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 190/424 (44%), Gaps = 71/424 (16%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +VFSWN + +R + + M + ++ P T+P K + L G
Sbjct: 74 IPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLG 133
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKC------------------------------- 121
++ H +G +VF +ALI+MYS C
Sbjct: 134 RELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRI 193
Query: 122 -----------------GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
G++ ARK F ++P+ R+ VSWT+M+ GY++ + +EAL+LF
Sbjct: 194 KKDVISWTAIVTGFVNTGQVDAARKYFHKMPE--RDHVSWTAMIDGYLRLNCYKEALMLF 251
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
+E + + D + SVL+AC+++ + E ++ K ++
Sbjct: 252 REM------------QTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTF 299
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
VGN LID Y + G+V+++ +F+ + ++D TW +++ A NG EAL++F QM+K++
Sbjct: 300 VGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKAS 359
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL 343
V + VT VL A H G++ G K + +E ++ ++D+ K G +
Sbjct: 360 -VTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKE 418
Query: 344 ARKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN----YITFVSVL 398
A + M K N W A++ +H A A ++++ + PN Y+ ++
Sbjct: 419 AHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILE--LEPNNGAVYVLQCNIY 476
Query: 399 SACS 402
+AC+
Sbjct: 477 AACN 480
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++FN ++ F+W +++ LA G EAL FS M K S+TP T+ + +C+
Sbjct: 319 SIFNTLPQRDK-FTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHT 377
Query: 87 HDLHSGKQAHQQAFI-FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ GK+ G ++ ++D+ K G L +A ++ +P + +IV W
Sbjct: 378 GMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIV-WG 436
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
++L + +A A ++ L E G N++
Sbjct: 437 ALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIY 476
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 237/658 (36%), Positives = 347/658 (52%), Gaps = 42/658 (6%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
S++VS + + + LF +V WN++I ++ G EAL F M +L +
Sbjct: 167 SALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGI 226
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI--FGFHRDVFVSSALIDMYSKCGELSDA 127
P TF K+CS+ L + + A + G DV V++AL++ Y++CGE+ A
Sbjct: 227 PPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCA 286
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
RK F E+P+R N VSWTSM+ + Q + A+ F LLE G +F
Sbjct: 287 RKFFAEMPER--NAVSWTSMIAAFTQIGHLL-AVETFHAMLLE-----GVVPTRSTLF-- 336
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
+ L C + V + E + G ++V + L+ AYAR + + +VF
Sbjct: 337 -----AALEGCEDLRVARLVEA---IAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFS 388
Query: 248 GMIEK--DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
E DA ++IA+YAQ ++ ++ + + + L A A L
Sbjct: 389 AREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIER-GISPDRILYITALDACASLAA 447
Query: 306 LRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L G+ IH V L+ V +G +I+ MY +CG + AR AF+ M ++ SW AM++
Sbjct: 448 LSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLS 507
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
H R + DLF M++ G I F+++LSAC+HAGLV+ G + M + +
Sbjct: 508 ASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVV 567
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
P EHYGCMVDLLGR G+L +A+ +++ M V D W +L+GACRI+ + + G AA++
Sbjct: 568 PATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAER 627
Query: 485 LFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLV 544
+ EL ++ +V L NIY+ AGRW+D R +M + L K PG S +E+R KVH F+V
Sbjct: 628 VLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVV 687
Query: 545 GDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----- 599
D+ HPQ E IY LE + ++ GY V+HDV++E+KE LR HSEKLA
Sbjct: 688 RDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGM 747
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + ISKV REIVVRD +RFH+FKDG CSCGDYW
Sbjct: 748 MSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 214/457 (46%), Gaps = 32/457 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K K+ V W +I+ G S A+ F + + + F + +CS+
Sbjct: 84 VFHKIAHKSIVL-WTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEE 142
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L +G+ H+ A G V+SAL+ MY +CG L DA LF + +R ++V W +M
Sbjct: 143 FLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHL-ERHLDVVLWNAM 201
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+T QN + REAL +F L + D V SV ACS +
Sbjct: 202 ITANSQNGSPREALEIFYRML------------QLGIPPDLVTFVSVFKACSSSPSLRAS 249
Query: 208 E--GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ G H + + G S+V V L++AYAR G +D +RK F M E++AV+W S+IA +
Sbjct: 250 QVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFT 309
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q G A++ F M+ V + TL A L L V RL + I ++ + V
Sbjct: 310 QIGHLL-AVETFHAMLLEGVVPTRS-TLFAALEGCEDLRVARLVEAIAQEI---GVVTDV 364
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW-----TAMIAGYGMHCRAREA-LDLF 379
+ T ++ Y +C + A + F+ +E W TAMIA Y CR R + L+
Sbjct: 365 AIVTDLVMAYARCDGQEDAIRVFSAREEGE---WDAALVTAMIAVYA-QCRDRRSTFKLW 420
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
I+ G+ P+ I +++ L AC+ + EG + + ++ V +V + G+
Sbjct: 421 GAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQ 480
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
G L++A D +GM + D + W ++L A H V+
Sbjct: 481 CGSLRDARDAFDGMPAR-DEISWNAMLSASAQHGRVE 516
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 124/249 (49%), Gaps = 10/249 (4%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+ ++L+ Y R G ++ + VF + K V W +I+ Y G +A A+ +F ++++
Sbjct: 64 LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQE- 122
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+ +A+ +VL A + L G+ IH ++ L IV ++++ MY +CG + A
Sbjct: 123 GIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDA 182
Query: 345 RKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
F ++ +V W AMI + REAL++FY+M++ G+ P+ +TFVSV ACS
Sbjct: 183 NALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS 242
Query: 404 AGLVQ----EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
+ ++ +G+H E + V +V+ R G++ A M + +
Sbjct: 243 SPSLRASQVKGFH---ACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPER-NA 298
Query: 460 VVWGSLLGA 468
V W S++ A
Sbjct: 299 VSWTSMIAA 307
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 233/631 (36%), Positives = 352/631 (55%), Gaps = 41/631 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ SWN++IA D F M + P + +C+ ++ G+
Sbjct: 25 DIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQ 84
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G + V +AL+ MY K G +DA +F + R ++V+W++M+ Y +N +
Sbjct: 85 LAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHR--DVVAWSAMVAAYARNGH 142
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFV 214
REAL LF++ L D V + V + S L AC+ ++ + GA H V
Sbjct: 143 PREALGLFRQMDL------------DGVAPNKVTLVSGLDACA--SLGDLRSGALMHQRV 188
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+G S V VG L++ Y + G ++ + + F ++EK+ V W++I A YA+N +A+
Sbjct: 189 EAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAI 248
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD--QVIKMDLEESVIVGTSII 332
V +M V N+ T +VL A A + L+ G+ IH+ QV+ LE V V T+++
Sbjct: 249 RVLHRMDLEGLVP-NSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALV 307
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+MY KCG + LA F+++ ++ W ++IA H + +AL+LF +M G++P I
Sbjct: 308 NMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTII 367
Query: 393 TFVSVLSACSHAGLVQEGW-HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
TF SVL ACSHAG++ +G H+++ +G + I P EH+GCMVDLLGRAG + ++ DL+
Sbjct: 368 TFTSVLFACSHAGMLDQGRKHFVSFIG-DHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLL 426
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M + V W + LGACR ++N+D AA+ LF+L+P +VLLSN+YA AGRW D
Sbjct: 427 HMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSD 486
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
V R R M+ K G S +E++ +VH F+ GD +HP+ +I+ L+ L ++E GY
Sbjct: 487 VARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKEAGY 546
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
V D V+HDV QE KE+ + HSEKLA NLRVC DCHT +
Sbjct: 547 VPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKF 606
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
ISK+V+REIVVRD RFH F++G CSCGDYW
Sbjct: 607 ISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 192/377 (50%), Gaps = 25/377 (6%)
Query: 114 LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
++ YS+ G + RK FDE+P + +IVSW +++ Y+ N + L F+ LL+
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMP--VADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGIN 58
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY 233
G V I+ LSAC+ + ++ G + E V L+ Y
Sbjct: 59 PG------------EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMY 106
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ GH + VF M +D V W++++A YA+NG EAL +F QM V N VTL
Sbjct: 107 GKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQM-DLDGVAPNKVTL 165
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
+ L A A LG LR G +H +V ++ V+VGT+++++Y KCG+++ A +AF Q+ E
Sbjct: 166 VSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVE 225
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
KNV +W+A+ A Y + R R+A+ + ++M G+ PN TFVSVL AC+ +++G
Sbjct: 226 KNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRI 285
Query: 414 ---LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
+G +E V +V++ + G L A D+ + + D V+W SL+
Sbjct: 286 HERTQVLGG--GLESDVYVLTALVNMYSKCGNLALAGDMFDKI-AHLDLVLWNSLIATNA 342
Query: 471 IHKNVDLGEIAAKKLFE 487
H + A +LFE
Sbjct: 343 QHGQTE----KALELFE 355
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 133/269 (49%), Gaps = 5/269 (1%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
++ AY++ G++ RK FD M D V+WN++IA Y N F M+ +
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQ-GINP 59
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
V +S L A + +G+ I ++ +EE IV T+++ MY K G A F
Sbjct: 60 GEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVF 119
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
+M ++V +W+AM+A Y + REAL LF +M GV PN +T VS L AC+ G ++
Sbjct: 120 LRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLR 179
Query: 409 EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
G ++ I+ GV +V+L G+ G+++ A + G V+ + V W ++ A
Sbjct: 180 SG-ALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAF-GQIVEKNVVAWSAISAA 237
Query: 469 -CRIHKNVDLGEIAAKKLFE-LEPNNCGY 495
R +N D + + E L PN+ +
Sbjct: 238 YARNDRNRDAIRVLHRMDLEGLVPNSTTF 266
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 23/239 (9%)
Query: 29 FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD 88
F + V+KN V +W+++ A AR + +A+R M L P +TF + +C+A+
Sbjct: 220 FGQIVEKN-VVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAA 278
Query: 89 LHSGKQAHQQAFIF--GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G++ H++ + G DV+V +AL++MYSKCG L+ A +FD+I ++V W S
Sbjct: 279 LKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAH--LDLVLWNS 336
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ Q+ +AL LF+ LE + + SVL ACS + +
Sbjct: 337 LIATNAQHGQTEKALELFERMRLE------------GLQPTIITFTSVLFACSHAGM--L 382
Query: 207 TEGAHGFVI---KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
+G FV G E ++D R G + S + M E V W + +
Sbjct: 383 DQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFL 441
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/576 (37%), Positives = 322/576 (55%), Gaps = 34/576 (5%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
+ G++ H + + GFHR + L+ MY+KCG L +AR +F+ I +R +VSW++M+
Sbjct: 1 MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILER--TVVSWSAMI 58
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
Y + +EALLLF N V +++ V +AC +
Sbjct: 59 GAYALHGRGQEALLLFHRM-----------RNDGRVEPNAMTFTGVFNACGVIEDLEQGR 107
Query: 209 GAHGFVIKRG--FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H + G S + N L++ Y R G ++ +RKVFD M DA +W S+I +
Sbjct: 108 EIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTE 167
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
N EAL++F +M + +VTL++VL A A G L++GK IH ++ SV+
Sbjct: 168 NCELLEALELFHRM-NLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVL 226
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
T+++DMY KCG ++ + K F M+ +N SWTAMIA H + EAL+LF +M G
Sbjct: 227 AQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEG 286
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+ + TF+ VL ACSHAGL++E + ++M ++ I P HY +D +GRAG+L++A
Sbjct: 287 MVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDA 346
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
+LI M + + W +LL ACRIH + A+ L +L P + + LL N+YA
Sbjct: 347 EELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAAT 406
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
GR+ D R R M +R L K PG S +E++ KVH F+ GD+ HP ++I LE+L ++
Sbjct: 407 GRYGDQMRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRM 466
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+E GYV + V+H V++EEKE + +HSEKLA NLRVC DCH
Sbjct: 467 REAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCH 526
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
++I+K++ R IVVRD+ RFH+F+DG CSC DYW
Sbjct: 527 AATKVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 562
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 168/353 (47%), Gaps = 21/353 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSAL 86
+FN +++ V SW+++I A G EAL F MR + P TF +C +
Sbjct: 42 IFNGILERT-VVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVI 100
Query: 87 HDLHSGKQAHQQAFIFGFHR--DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
DL G++ H A G + + + +AL++MY +CG L +ARK+FD + + SW
Sbjct: 101 EDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDH--PDAFSW 158
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
TSM+T +N EAL LF N + + SV +ASVL+AC+
Sbjct: 159 TSMITACTENCELLEALELFHRM------------NLEGIPPTSVTLASVLNACACSGAL 206
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
V + H + GF S V L+D YA+ G ++ S KVF M +++V+W ++IA
Sbjct: 207 KVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAAL 266
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEE 323
AQ+G EAL++F +M V +A T VL A +H G+++ + H V +
Sbjct: 267 AQHGQGDEALELFKEMNLEGMVA-DATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAP 325
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREA 375
+ +D + G++ A + + M +W ++ +H +A A
Sbjct: 326 TETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERA 378
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 113/266 (42%), Gaps = 22/266 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+D + FSW S+I + +EAL F M + PT T + +C+ L G
Sbjct: 150 MDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVG 209
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H + GFH V +AL+DMY+KCG L + K+F + RN VSWT+M+
Sbjct: 210 KQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAM--ETRNSVSWTAMIAALA 267
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q+ EAL LFKE N + + D+ VL ACS G+ + +
Sbjct: 268 QHGQGDEALELFKEM------------NLEGMVADATTFICVLRACSHA---GLIKESLE 312
Query: 213 FVIKRGFDSEVGVGNT----LIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQN 267
F D + T +D R G + + ++ M + +TW +++ +
Sbjct: 313 FFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIH 372
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTL 293
A A V + + K A TL
Sbjct: 373 SQAERATKVAELLSKLAPEDSMAYTL 398
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/635 (36%), Positives = 350/635 (55%), Gaps = 60/635 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS-----CSALH 87
+ + NV SW +++ + G VEA F M + + F I L+
Sbjct: 105 MPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLY 164
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D+ GK DV S+ +I + G + +AR++FDE+ R RN+++WT+M
Sbjct: 165 DMMPGK-------------DVVASTNMIGGLCREGRVDEAREIFDEM--RERNVITWTTM 209
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+TGY QN A LF E + E++E V+ S+L T++G
Sbjct: 210 ITGYGQNKRVDVARKLF-EVMPEKTE---------------VSWTSMLLG---YTLSGRI 250
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
E A F + N +I A G + +R+VFD M ++D TW +I Y +
Sbjct: 251 EDAEEFFEVMPMKPVIAC-NAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERK 309
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EAL++F QM + V+ + +L ++L A L L+ G+ +H +++ + V V
Sbjct: 310 GFELEALELFAQM-QRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYV 368
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+ ++ MY KCG++ A+ F++ K++ W ++I+GY H EAL +F++M +G
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGT 428
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
PN +T +++L+ACS+ G ++EG +M +F + P VEHY C VD+LGRAGK+ +A
Sbjct: 429 MPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAM 488
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+LI M +K D VWG+LLGAC+ H +DL E+AAKKLFE+EP N G ++LLS+I A+
Sbjct: 489 ELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRS 548
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD-KEHPQHEKIYEYLEELNVKL 566
+W DV R M+ + ++K PG S +E+ KVH F G + HP+ I LE+ + L
Sbjct: 549 KWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLL 608
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+E GY D + V+HDVD+EEK +L HSE+LA NLRVCGDCH
Sbjct: 609 REAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCH 668
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
I+LISKV +REI++RD+ RFH+F +G CSC DY
Sbjct: 669 AAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 210/465 (45%), Gaps = 72/465 (15%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
NN F I+ L+R G EA + F S+R K+ + + + SG A
Sbjct: 19 NNSFE----ISRLSRIGQINEARKFFDSLR--------------YKAIGSWNSIVSGYFA 60
Query: 96 H------QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
+ +Q F R++ + L+ Y K + +AR +F+ +P+ RN+VSWT+M+
Sbjct: 61 NGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPE--RNVVSWTAMVK 118
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
GYVQ EA LLF + E +E V G+ +G
Sbjct: 119 GYVQEGMVVEAELLFWR-MPERNEVSWT-----------------------VMFGGLIDG 154
Query: 210 AHGFVIKRGFD----SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
++ +D +V +I R G VD +R++FD M E++ +TW ++I Y
Sbjct: 155 GRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYG 214
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QN A +F+ M + T+ V+ +++LL G + + +V+ M + V
Sbjct: 215 QNKRVDVARKLFEVMPEKTE-----VSWTSMLLGYTLSGRIEDAEEFF-EVMPM---KPV 265
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
I ++I + G++ AR+ F+QM++++ +W MI Y EAL+LF +M +
Sbjct: 266 IACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQ 325
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY--GCMVDLLGRAGKL 443
GVRP++ + +S+LS C+ +Q G H + + Y ++ + + G+L
Sbjct: 326 GVRPSFPSLISILSVCATLASLQYG---RQVHAHLVRCQFDGDVYVASVLMTMYVKCGEL 382
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
+A + + K D ++W S++ H LGE A K E+
Sbjct: 383 VKAKLVFDRFPSK-DIIMWNSIISGYASH---GLGEEALKVFHEM 423
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 133/313 (42%), Gaps = 64/313 (20%)
Query: 213 FVIKRGFDSEVGVGNTL-IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
++ R + + GV N+ I +R G ++ +RK FD + K +WNSI++ Y NGL
Sbjct: 6 LILHRAYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPR 65
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA +FD+M E +++ +
Sbjct: 66 EARQMFDEMP----------------------------------------ERNIVSWNGL 85
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ Y K ++ AR F M E+NV SWTAM+ GY EA LF++M + N
Sbjct: 86 VSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPER----NE 141
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC--MVDLLGRAGKLKEAYDL 449
+++ + G + + + M PG + M+ L R G++ EA ++
Sbjct: 142 VSWTVMFGGLIDGGRIDDARKLYDMM-------PGKDVVASTNMIGGLCREGRVDEAREI 194
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY---HVLLSNIYANA 506
+ M+ + + + W +++ +K VD+ A+KLFE+ P +LL Y +
Sbjct: 195 FDEMRER-NVITWTTMITGYGQNKRVDV----ARKLFEVMPEKTEVSWTSMLLG--YTLS 247
Query: 507 GRWEDVERTRSLM 519
GR ED E +M
Sbjct: 248 GRIEDAEEFFEVM 260
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/596 (37%), Positives = 342/596 (57%), Gaps = 35/596 (5%)
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
SL S+ A+KSC ++ + H + +R F+ L+ Y + G A
Sbjct: 29 SLDANVSSLIAAVKSCVSIELC---RLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCA 85
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
KLFDE+P+R ++VSW S+++GY + + ++ E G N
Sbjct: 86 EKLFDEMPER--DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEV---GFRPNE------ 134
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
V S++SAC HG V+K G EV V N I+ Y + G + S K+F+
Sbjct: 135 -VTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFE 193
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ K+ V+WN++I I+ QNGLA + L F+ M + + + T AVL + +GV+R
Sbjct: 194 DLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN-MSRRVGHEPDQATFLAVLRSCEDMGVVR 252
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
L + IH ++ + + T+++D+Y K G+++ + F+++ + +WTAM+A Y
Sbjct: 253 LAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYA 312
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
H R+A+ F M+ G+ P+++TF +L+ACSH+GLV+EG H+ TM + I+P +
Sbjct: 313 THGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRL 372
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
+HY CMVDLLGR+G L++AY LI+ M ++ VWG+LLGACR++K+ LG AA++LFE
Sbjct: 373 DHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFE 432
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
LEP + +V+LSNIY+ +G W+D R R+LMK + L + G S +E K+H F+VGD
Sbjct: 433 LEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDW 492
Query: 548 EHPQHEKIYEYLEELNVKLQ-EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
HP+ EKI + L+E+ K++ E+GY + V+HDV ++ KE + HSEK+A
Sbjct: 493 SHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLV 552
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCH + IS + R I++RDSKRFH+F DG CSC DYW
Sbjct: 553 VSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 160/341 (46%), Gaps = 20/341 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPCAIKSCSA 85
LF++ +++ V SWNS+I+ + G + S M ++ P TF I +C
Sbjct: 88 LFDEMPERDLV-SWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVY 146
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
G+ H FG +V V +A I+ Y K G+L+ + KLF+++ I+N+VSW
Sbjct: 147 GGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLS--IKNLVSWN 204
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M+ ++QN A + L F E D +VL +C + V
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHE------------PDQATFLAVLRSCEDMGVVR 252
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ +G HG ++ GF + L+D Y++ G ++ S VF + D++ W +++A YA
Sbjct: 253 LAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYA 312
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEES 324
+G +A+ F+ MV + + VT + +L A +H G++ GK + + K ++
Sbjct: 313 THGFGRDAIKHFELMVH-YGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPR 371
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIA 364
+ + ++D+ + G + A +M E + W A++
Sbjct: 372 LDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 412
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 129/284 (45%), Gaps = 25/284 (8%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKN--NVFSWNSVIADLARGGDSVEAL 58
MK V V + ++ + +LT+ + D + N+ SWN++I + G + + L
Sbjct: 161 MKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGL 220
Query: 59 RAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMY 118
F+ R++ P ++TF ++SC + + + H GF + +++AL+D+Y
Sbjct: 221 AYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLY 280
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
SK G L D+ +F EI + ++WT+ML Y + R+A+ F E ++
Sbjct: 281 SKLGRLEDSSTVFHEITS--PDSMAWTAMLAAYATHGFGRDAIKHF-ELMVHY------- 330
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF--VIKR-GFDSEVGVGNTLIDAYAR 235
+ D V +L+ACS + V EG H F + KR D + + ++D R
Sbjct: 331 ----GISPDHVTFTHLLNACSHSGL--VEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR 384
Query: 236 GGHVDVSRKVFDGM-IEKDAVTWNSIIA---IYAQNGLAAEALD 275
G + + + M +E + W +++ +Y L +A +
Sbjct: 385 SGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAE 428
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/604 (37%), Positives = 338/604 (55%), Gaps = 47/604 (7%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++C AL L +Q H A G D F ++ L+ Y+ G+ AR LF+ IP+R
Sbjct: 52 FRACQALPLL---RQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKR-- 106
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEF----------LLEESECGGASENSDNVFV--- 186
N++SW ++ GYV+N + A LF E ++ G +E S F
Sbjct: 107 NVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMR 166
Query: 187 ------DSVAIASVLSACS--RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
D + S+ C+ R V+G H +V++ G D ++ VG++L Y R G
Sbjct: 167 REGMQPDEYGLGSLFRCCAGLRDVVSG--RQVHAYVVRSGLDRDMCVGSSLAHMYMRCGF 224
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
+ + + V+ N+ I+ QNG A AL+ F M + V+ NAVT + +
Sbjct: 225 LRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLM-RGAGVEANAVTFVSAVT 283
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
+ + L L G+ IH IK +++ V V TS++ MY +CG + + + + ++
Sbjct: 284 SCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVL 343
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
+AMI+ YG H ++A+ LF +M+ AG PN +TF+++L ACSH+GL EG + M
Sbjct: 344 CSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMT 403
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
+ ++P V+HY C+VDLLGR+G L EA DLI M V+ D V+W +LL AC+ K D+
Sbjct: 404 KTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMA 463
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
E A+++ EL+P++ +VLLSNI A + RWEDV + R M+ + + K PG S VEL+G+
Sbjct: 464 ERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQ 523
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
+H F GD+ H + +I E LEE+ ++++ GY DM+ V HD++ EEKE++L HSEKL
Sbjct: 524 IHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKL 583
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVC DCH I+L+SKV+ REIVVRD RFH+FKDG CSC
Sbjct: 584 AIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSC 643
Query: 641 GDYW 644
GDYW
Sbjct: 644 GDYW 647
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 163/362 (45%), Gaps = 25/362 (6%)
Query: 22 NTNLTT---LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC 78
N +L T LF++ + NV +WN+++A L G + E+L F +MR+ + P
Sbjct: 121 NGDLETARKLFDE-MPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGS 179
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
+ C+ L D+ SG+Q H G RD+ V S+L MY +CG L D +P
Sbjct: 180 LFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPS-- 237
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
NIVS + ++G QN +A AL F V ++V S +++C
Sbjct: 238 LNIVSCNTTISGRTQNGDAEGALEFF------------CLMRGAGVEANAVTFVSAVTSC 285
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
S + + H IK G D V V +L+ Y+R G + S +V D V +
Sbjct: 286 SDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCS 345
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVI 317
++I+ Y +G +A+ +F QM+ + + N VT +L A +H G+ G C
Sbjct: 346 AMISAYGFHGHGQKAVGLFKQMM-AAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTK 404
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREAL 376
L+ SV T I+D+ + G ++ A M + + W +++ C+ ++
Sbjct: 405 TYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA----CKTQKKF 460
Query: 377 DL 378
D+
Sbjct: 461 DM 462
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/656 (33%), Positives = 371/656 (56%), Gaps = 42/656 (6%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S++S + + + +F+K +++ + SWNS++A G+ AL M +
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMRERD-LISWNSMMASHVDNGNYPRALELLIEMLQTRK 358
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
TF A+ +C ++L + K H + G H ++ + +AL+ MY K G ++ A++
Sbjct: 359 ATNYVTFTTALSAC---YNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQR 415
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+ +P R + V+W +++ G+ N A+ F LL E + V V+ +
Sbjct: 416 VCKIMPDR--DEVTWNALIGGHADNKEPNAAIEAFN--LLRE----------EGVPVNYI 461
Query: 190 AIASVLSA---CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
I ++LSA + +G+ AH ++ GF+ E V ++LI YA+ G ++ S +F
Sbjct: 462 TIVNLLSAFLSPDDLLDHGMPIHAH--IVVAGFELETFVQSSLITMYAQCGDLNTSNYIF 519
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D + K++ TWN+I++ A G EAL + +M ++ + + + S I +L +L
Sbjct: 520 DVLANKNSSTWNAILSANAHYGPGEEALKLIIKM-RNDGIHLDQFSFSVAHAIIGNLTLL 578
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
G+ +H +IK E + V + +DMY KCG++D + Q + ++ RSW +I+
Sbjct: 579 DEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISAL 638
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
H ++A + F++M+ G+RP+++TFVS+LSACSH GLV EG + ++M +F + G
Sbjct: 639 ARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTG 698
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
+EH C++DLLGRAGKL EA + I M V +VW SLL AC+IH N++L AA +LF
Sbjct: 699 IEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLF 758
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
EL+ ++ +VL SN+ A+ RW DVE R M++ + K P S V+L+ +V F +GD
Sbjct: 759 ELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGD 818
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
+ HPQ+ +IY LEEL ++E GY+ D + + D D+E+KE L HSE++A
Sbjct: 819 QYHPQNAEIYAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLIN 878
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH+V +++S+++ R+I++RD+ RFH+F G CSC DYW
Sbjct: 879 SSEGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 223/446 (50%), Gaps = 30/446 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++N SWN++++ R G +A++ F M + + P+ + +C
Sbjct: 14 VFDKMPERNEA-SWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLVTACDRSG 72
Query: 88 DLHSGK-QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ G Q H G DVFV ++L+ Y G +++ +F EI + NIVSWTS
Sbjct: 73 CMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEP--NIVSWTS 130
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ GY N +E + +++ D V+ + A+A+V+ +C + +
Sbjct: 131 LMVGYAYNGCVKEVMSVYRRL------------RRDGVYCNENAMATVIRSCGVLVDKML 178
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
G VIK G D+ V V N+LI + ++ + VFD M E+D ++WNSII
Sbjct: 179 GYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVH 238
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG ++L+ F QM + T K + +T+SA+L LR G+ +H V+K LE +V
Sbjct: 239 NGHCEKSLEYFSQM-RYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVC 297
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V S++ MY + G+ + A F++M+E+++ SW +M+A + + AL+L +M++
Sbjct: 298 VCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTR 357
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGK 442
NY+TF + LSAC + ++ + H F I G+ H +V + G+ G
Sbjct: 358 KATNYVTFTTALSACYNLETLK--------IVHAFVILLGLHHNLIIGNALVTMYGKFGS 409
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGA 468
+ A + + M + D V W +L+G
Sbjct: 410 MAAAQRVCKIMPDR-DEVTWNALIGG 434
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 175/359 (48%), Gaps = 30/359 (8%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MYSK G + A+ +FD++P+ RN SW ++++G+V+ ++A+ F L
Sbjct: 1 MYSKFGSIEHAQHVFDKMPE--RNEASWNNLMSGFVRVGWYQKAMQFFCHML-------- 50
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA---HGFVIKRGFDSEVGVGNTLIDAY 233
V S AS+++AC R +TEGA H VIK G +V VG +L+ Y
Sbjct: 51 ----EHGVRPSSYVAASLVTACDRSGC--MTEGAFQVHAHVIKCGLACDVFVGTSLLHFY 104
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
G V VF + E + V+W S++ YA NG E + V+ ++ + V CN +
Sbjct: 105 GTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRL-RRDGVYCNENAM 163
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
+ V+ + L LG + VIK L+ +V V S+I M+ C ++ A F+ MKE
Sbjct: 164 ATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKE 223
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
++ SW ++I + ++L+ F +M + +YIT ++L C A + W
Sbjct: 224 RDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSA----QNLRW 279
Query: 414 LNTMGHEFNIEPGVEHYGC----MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ H ++ G+E C ++ + +AGK ++A + M+ + D + W S++ +
Sbjct: 280 GRGL-HGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRER-DLISWNSMMAS 336
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/600 (37%), Positives = 342/600 (57%), Gaps = 43/600 (7%)
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRD-VFVSSALIDMYSK---CGE 123
+L P S+ I C++L +L KQ QA+ H++ V + LI+ +
Sbjct: 30 ALEPPSSSILSLIPKCTSLREL---KQI--QAYTIKTHQNNPTVLTKLINFCTSNPTIAS 84
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ A ++FD+IPQ +IV + +M GY + D+ A+LL + L C G
Sbjct: 85 MDHAHRMFDKIPQP--DIVLFNTMARGYARFDDPLRAILLCSQVL-----CSG------- 130
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ D +S+L AC+R+ + H +K G + V TLI+ Y VD +R
Sbjct: 131 LLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAAR 190
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+VFD + E V +N+II A+N EAL +F ++ +S +K VT+ L + A L
Sbjct: 191 RVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQES-GLKPTDVTMLVALSSCALL 249
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G L LG+ IH+ V K ++ V V T++IDMY KCG +D A F M ++ ++W+AMI
Sbjct: 250 GALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMI 309
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
Y H +A+ + +M KA V+P+ ITF+ +L ACSH GLV+EG+ + ++M HE+ I
Sbjct: 310 VAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGI 369
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
P ++HYGCM+DLLGRAG+L+EA I+ + +K ++W +LL +C H NV++ ++ +
Sbjct: 370 VPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQ 429
Query: 484 KLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL 543
++FEL+ ++ G +V+LSN+ A GRW+DV R +M ++ K PG S +E+ VH F
Sbjct: 430 RIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFF 489
Query: 544 VGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIH-DVDQEEKEMTLRIHSEKLA--- 599
GD H ++ L+EL +L+ GYV D + V + D++ EEKE+ LR HSEKLA
Sbjct: 490 SGDGVHSTSTILHHALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITY 549
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + IS + R+I++RD +RFH+FKDG CSCGDYW
Sbjct: 550 GLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 171/344 (49%), Gaps = 18/344 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K + + ++ +N++ AR D + A+ S + L P TF +K+C+ L
Sbjct: 91 MFDK-IPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLK 149
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GKQ H A G +++V LI+MY+ C ++ AR++FD+I + +V++ ++
Sbjct: 150 ALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPC--VVAYNAI 207
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+T +N EAL LF+E L+ES + V + LS+C+ + +
Sbjct: 208 ITSCARNSRPNEALALFRE--LQES----------GLKPTDVTMLVALSSCALLGALDLG 255
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H +V K GFD V V LID YA+ G +D + VF M +D W+++I YA +
Sbjct: 256 RWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATH 315
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVI 326
G ++A+ + +M K V+ + +T +L A +H G++ G + H + + S+
Sbjct: 316 GHGSQAISMLREM-KKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIK 374
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
+ID+ + G+++ A K +++ K W +++ H
Sbjct: 375 HYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSH 418
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 21/245 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K + + V ++N++I AR EAL F +++ L PT T A+ SC+ L
Sbjct: 192 VFDK-IGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLG 250
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+ H+ GF + V V++ALIDMY+KCG L DA +F ++P+ R+ +W++M
Sbjct: 251 ALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPR--RDTQAWSAM 308
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y + + +A+ + +E V D + +L ACS + V
Sbjct: 309 IVAYATHGHGSQAISMLREM------------KKAKVQPDEITFLGILYACSHTGL--VE 354
Query: 208 EGA---HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAI 263
EG H + G + +ID R G ++ + K D + I+ + W ++++
Sbjct: 355 EGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSS 414
Query: 264 YAQNG 268
+ +G
Sbjct: 415 CSSHG 419
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/630 (36%), Positives = 347/630 (55%), Gaps = 37/630 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRK-LSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
+V +WNS++ G AL F M + L + A+ +C L G++
Sbjct: 174 DVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREV 233
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H G DV V ++++DMY KCG+++ A +F +P R +V+W M+ GY N+
Sbjct: 234 HAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSR--TVVTWNCMIGGYALNE 291
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
EA F + E + V+ V ++L+AC++ + HG++
Sbjct: 292 RPEEAFDCFVQMKAEGHQ------------VEVVTAINLLAACAQTESSLYGRSVHGYIT 339
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+R F V + L++ Y++ G V S KVF M K V+WN++IA Y + EA+
Sbjct: 340 RRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAIT 399
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F ++ + + T+SAV+ A LG+LR + +H +I++ E+ ++ +I+ MY
Sbjct: 400 LFLDLLNQP-LYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMY 458
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
+CG V +R+ F++M K+V SW MI GY +H + R AL++F +M G+RPN TFV
Sbjct: 459 ARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFV 518
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
SVL+ACS +GL EGW N+M ++ + P +EHYGCM DLLGRAG LKE IE M +
Sbjct: 519 SVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPI 578
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP-----NNCGYHVLLSNIYANAGRWE 510
F VWGSLL A R ++D+ E AA+++F+LE +N G +VL+S++YA+AGRW+
Sbjct: 579 DPTFRVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWK 638
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
DVER +SLM+ + L +T S+VEL G +F+ GD HPQ + I E L+ K+ E+
Sbjct: 639 DVERIKSLMEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFLSGKIGEMR 698
Query: 571 ---YVTDMTSVIHDVDQEEKEMTLR-------IHSEKLA------NLRVCGDCHTVIRLI 614
+D TS+ E + ++R I +E N+R+C DCH ++LI
Sbjct: 699 DPMNQSDPTSLDSRRTTEPNKHSVRLAVVFGLISTEARTPILVKKNVRICNDCHHALKLI 758
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK R IVV D+ +H F DG C CGDYW
Sbjct: 759 SKYSGRRIVVGDTNIYHQFSDGSCCCGDYW 788
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 195/410 (47%), Gaps = 31/410 (7%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARK 129
P R TFP +K C+ L L G+ AH A G DV+ ++L+ Y++ G + DA +
Sbjct: 106 PDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAER 165
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FD +P R++V+W SM+ GYV N AL+ F+E + V D V
Sbjct: 166 VFDGMPA--RDVVTWNSMVDGYVSNGLGTLALVCFREM-----------HEALEVQHDGV 212
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
I + L+AC + H +VI+ G + +V VG +++D Y + G + + VF M
Sbjct: 213 GIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATM 272
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+ VTWN +I YA N EA D F QM K+ + VT +L A A G
Sbjct: 273 PSRTVVTWNCMIGGYALNERPEEAFDCFVQM-KAEGHQVEVVTAINLLAACAQTESSLYG 331
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
+ +H + + V++ T++++MY K G+V + K F QM K + SW MIA Y
Sbjct: 332 RSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYK 391
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
EA+ LF ++ + P+Y T +V+ A GL+++ H + I G
Sbjct: 392 EMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQM-----HSYIIRLG--- 443
Query: 430 YG-------CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
YG ++ + R G + + ++ + M K D + W +++ IH
Sbjct: 444 YGENTLIMNAIMHMYARCGDVLSSREIFDKMAAK-DVISWNTMIMGYAIH 492
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/635 (36%), Positives = 354/635 (55%), Gaps = 34/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ V K+ V +W ++++ + L+ FS MR +++ L
Sbjct: 588 VFDGIVGKDAV-AWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLS 646
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ GK H + + + V AL+DMY+KCG + DAR F+ + +++ W+ M
Sbjct: 647 SVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTND--DVILWSLM 704
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ Y Q + +A LF + S S N F +++SVL AC+ + + +
Sbjct: 705 ISRYAQCNQNEQAFELFIRMM--------RSSVSPNEF----SLSSVLQACANMPLLDLG 752
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H IK G +SE+ VGN LID YA+ ++ S ++F + + + V+WN+II Y+++
Sbjct: 753 KQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKS 812
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G AL VF +M ++ V VT S+VL A A + +H + K IV
Sbjct: 813 GFGEAALSVFREM-RAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIV 871
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
S+ID Y KCG + AR+ F +KE ++ SW A+I+GY +H +A A +LF M K +
Sbjct: 872 SNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSI 931
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+ N ITFV++LS C GLV +G ++M + IEP +EHY C+V LLGRAG+L +A
Sbjct: 932 KANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDAL 991
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ I + +VW +LL +C +HKNV+LG +A+K+ E+EP + +VLLSN+Y+ AG
Sbjct: 992 NFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAG 1051
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+ V R M+N + K PG S VE++G+VHAF VG ++HP I LE LN+K
Sbjct: 1052 SLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAI 1111
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV D V+HD+++E+K L +HSE+LA NLR C DCH
Sbjct: 1112 REGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHA 1171
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ ++ISK+V +EI+VRD RFH+F++G CSCGDYW
Sbjct: 1172 IFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 235/461 (50%), Gaps = 23/461 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N+ S+ +++ A G+ EA F +R + +K A+ L
Sbjct: 491 LPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLA 550
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
H A G R+ FV SALID YS CG +SDAR++FD I ++ V+WT+M++ Y
Sbjct: 551 WGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVG--KDAVAWTAMVSCYS 608
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ND L +F + + S+ ++ A+ SVL A ++ + +G H
Sbjct: 609 ENDCPENTLQIFSKMRVAVSK------------LNPFALTSVLRAAVCLSSVVLGKGIHA 656
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+K +D+E V L+D YA+ G+++ +R F+ + D + W+ +I+ YAQ +
Sbjct: 657 CSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQ 716
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A ++F +M++S+ V N +LS+VL A A++ +L LGK IH+ IK+ E + VG ++I
Sbjct: 717 AFELFIRMMRSS-VSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALI 775
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
D+Y KC ++ + + F+ +++ N SW +I GY AL +F +M A V +
Sbjct: 776 DLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQV 835
Query: 393 TFVSVLSAC-SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
T+ SVL AC S A + G FN + V + ++D + G +++A ++ E
Sbjct: 836 TYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSN--SLIDSYAKCGCIRDAREIFE 893
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNN 492
+K + D V W +++ +H + A++LF++ N
Sbjct: 894 TLK-ECDLVSWNAIISGYAVHGQAAM----AQELFDMMSKN 929
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 194/392 (49%), Gaps = 25/392 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFG--FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
++ C A D G+ H G D+F ++ L++MY+K G A ++FD +P+R
Sbjct: 435 LQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPER 494
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
N+VS+ +++ G+ EA LF+ E E V+ + +VL
Sbjct: 495 --NMVSFVTLVQGHALRGEFEEASALFQRLRWEGHE------------VNQFVLTTVLKL 540
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
+ G+ G H K G D VG+ LIDAY+ G V +R+VFDG++ KDAV W
Sbjct: 541 VVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAW 600
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
++++ Y++N L +F +M + K N L++VL A L + LGK IH +
Sbjct: 601 TAMVSCYSENDCPENTLQIFSKMRVAVS-KLNPFALTSVLRAAVCLSSVVLGKGIHACSV 659
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
K + V +++DMY KCG ++ AR AF + +V W+ MI+ Y + +A +
Sbjct: 660 KTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFE 719
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN---TMGHEFNIEPGVEHYGCMV 434
LF +M+++ V PN + SVL AC++ L+ G N +GHE + G ++
Sbjct: 720 LFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVG----NALI 775
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
DL + ++ + ++ ++ + V W +++
Sbjct: 776 DLYAKCSDMESSLEIFSSLR-DVNEVSWNTII 806
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/571 (38%), Positives = 339/571 (59%), Gaps = 37/571 (6%)
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H Q G +D F+ L+ SKC + A ++F N+ +T+++ G+V +
Sbjct: 52 HAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNP--NVYLYTALIDGFVSSG 109
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
N +A+ L+ L D++ D+ +AS+L AC H +
Sbjct: 110 NYFDAIQLYSRML------------HDSILPDNYLMASILKACGSQLALREGREVHSRAL 157
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE----KDAVTWNSIIAIYAQNGLAA 271
K G S V +++ Y + G + +R+VF+ M E KD V W ++I + +N
Sbjct: 158 KLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMN 217
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
AL+ F M + +V+ N T+ VL A + LG L +G+ +H + K ++E ++ VG ++
Sbjct: 218 RALEAFRGM-QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNAL 276
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
I+MY +CG +D A+ F++MK+++V ++ MI+G M+ ++R+A++LF MI +RP
Sbjct: 277 INMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTN 336
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+TFV VL+ACSH GLV G+ ++M ++ +EP +EHYGCMVDLLGR G+L+EAYDLI
Sbjct: 337 VTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIR 396
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
MK+ D ++ G+LL AC++HKN++LGE AK L + + G +VLLS++YA++G+W++
Sbjct: 397 TMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKE 456
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
+ R+ MK + K PG S +E+ ++H FL+GD HP+ E+IYE LEELN L+ GY
Sbjct: 457 AAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGY 516
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
+ V+ D++ EKE L IHSE+LA NLRVC DCH+ I+L
Sbjct: 517 HPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKL 576
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+K+ R++VVRD RFHYF++G CSCGDYW
Sbjct: 577 IAKITRRKVVVRDRNRFHYFENGACSCGDYW 607
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 167/325 (51%), Gaps = 16/325 (4%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+Y NV+ + ++I G+ +A++ +S M S+ P +K+C + L
Sbjct: 88 QYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALR 147
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI--RNIVSWTSML 148
G++ H +A G + V ++++Y KCGEL DAR++F+E+P+ + ++ V WT+M+
Sbjct: 148 EGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMI 207
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
G+V+N+ AL F+ +NV + I VLSACS++ +
Sbjct: 208 DGFVRNEEMNRALEAFRGM------------QGENVRPNEFTIVCVLSACSQLGALEIGR 255
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
H ++ K + + VGN LI+ Y+R G +D ++ VFD M ++D +T+N++I+ + NG
Sbjct: 256 WVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNG 315
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIV 327
+ +A+++F M+ ++ VT VL A +H G++ G K H +E +
Sbjct: 316 KSRQAIELFRVMI-GRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEH 374
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK 352
++D+ + G+++ A MK
Sbjct: 375 YGCMVDLLGRVGRLEEAYDLIRTMK 399
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
IH Q+I+ + + ++ KC +D A + F NV +TA+I G+
Sbjct: 51 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 110
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
+A+ L+ +M+ + P+ S+L AC ++EG +++ + +
Sbjct: 111 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGRE-VHSRALKLGLSSNRLVRL 169
Query: 432 CMVDLLGRAGKLKEAYDLIEGMK---VKADFVVWGSLL 466
+++L G+ G+L +A + E M V D V W +++
Sbjct: 170 RIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMI 207
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/655 (35%), Positives = 359/655 (54%), Gaps = 55/655 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHS 91
+ + NV SW +++ R GD+ E LR +MR LS + P T ++K+C + D+ +
Sbjct: 65 MPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAA 124
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G H GF V+++L+ +YSK G + DAR++FD RN+V+W +M++GY
Sbjct: 125 GVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTV--FRNLVTWNAMISGY 182
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA- 210
+ R++LL+F+E E ++ D AS+L AC ++ EGA
Sbjct: 183 AHAGHGRDSLLVFREMQQRRQE-------EEDHQPDEFTFASLLKACG--SLGAAREGAQ 233
Query: 211 -HGFVIKRGFD--SEVGVGNTLIDAYARGG-HVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H ++ RG S + L+D Y + + ++ +VF+ + +K+A+ W ++I +AQ
Sbjct: 234 VHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQ 293
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
G EA+++F + S+ V+ + LS+V+ A ++ G+ +H +K V
Sbjct: 294 EGQVKEAMELFGRFW-SSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVS 352
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V S+IDMY KCG D A + F ++ +NV SWTAMI G G H +EA+ +F +M G
Sbjct: 353 VANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEG 412
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
V P+ + ++++LSACSH+GLV+E + + + H+ + P EHY CMVDLLGRAG+L EA
Sbjct: 413 VEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEA 472
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
DL+ M + VW +LL ACR+HKNV +G A + L ++ +N +V+LSNI+A A
Sbjct: 473 KDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEA 532
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFL-VGDKEHPQHEKIYEYLEELNVK 565
G W + +R R M+ R L K G S VE+ + H F GD HP+ I L ++
Sbjct: 533 GDWRECQRVRGAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDVERT 592
Query: 566 LQE-VGYVTDMT-----SVIHDVDQEEKEMTLRIHSEKLA-------------------- 599
++E +GY + + +HDVD+E + +LR HSE+LA
Sbjct: 593 MRERLGYSPGSSSSSSEAALHDVDEESRAESLRAHSERLAVGLWLLLHHDHDHGEGMGGT 652
Query: 600 ----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH + +S VV R +VVRD+ RFH F+DG+CSC DYW
Sbjct: 653 KRKEVIRVYKNLRVCGDCHEFFKGLSSVVGRVLVVRDANRFHRFEDGVCSCKDYW 707
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 215/430 (50%), Gaps = 53/430 (12%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+++ +A +H G Q H GF D + + LIDMY+KCGEL A ++F +P+ R
Sbjct: 11 LRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPE--R 68
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+VSWT+++ G++++ +ARE L L GA + +V + +++ L AC
Sbjct: 69 NVVSWTALMVGFLRHGDARECLRLL-----------GAMRSLSDVAPNEFTLSASLKACG 117
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
V HG ++ GF+ V N+L+ Y++GG + +R+VFDG + ++ VTWN+
Sbjct: 118 VVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNA 177
Query: 260 IIAIYAQNGLAAEALDVFDQMVK----STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+I+ YA G ++L VF +M + D + + T +++L A LG R G +H
Sbjct: 178 MISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAA 237
Query: 316 VI--KMDLEESVIVGTSIIDMYCKCG-QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
++ + + I+ +++DMY KC + +A + FN++++KN WT +I G+ +
Sbjct: 238 MVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQV 297
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG---------------------- 410
+EA++LF + +GVR + SV+ + LV++G
Sbjct: 298 KEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSL 357
Query: 411 ---WH---WLNTMGHEFNIEPG--VEHYGCMVDLLGRAGKLKEAYDLIEGMK---VKADF 459
+H + F P V + M++ LG+ G +EA + E M+ V+ D
Sbjct: 358 IDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDE 417
Query: 460 VVWGSLLGAC 469
V + +LL AC
Sbjct: 418 VAYLALLSAC 427
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ +++ N W +VI A+ G EA+ F + + +
Sbjct: 272 VFNR-LEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFA 330
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G+Q H DV V+++LIDMY KCG +A + F E+P RN+VSWT+M
Sbjct: 331 LVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPA--RNVVSWTAM 388
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+ G ++ + +EA+ +F+E ++ V D VA ++LSACS
Sbjct: 389 INGLGKHGHGQEAIHMFEEM------------RAEGVEPDEVAYLALLSACS 428
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
++ +L A A + G +H ++K+ ++G ++IDMY KCG++ +A + F M
Sbjct: 7 IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIK-AGVRPNYITFVSVLSACSHAGLVQEGW 411
E+NV SWTA++ G+ H ARE L L M + V PN T + L AC G + G
Sbjct: 67 ERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGV 126
Query: 412 HWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
W+ H + G E + +V L + G++ +A + +G V + V W +++
Sbjct: 127 -WI----HGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDG-TVFRNLVTWNAMI 179
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/635 (36%), Positives = 351/635 (55%), Gaps = 41/635 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ NVFSW ++A A D F M + P + +C+ ++ G
Sbjct: 36 IQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIG 95
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ G + V +AL+ +Y K G +DA +F + R ++V+W++M+ Y
Sbjct: 96 RSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHR--DVVAWSAMVAAYA 153
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA-- 210
+N + REAL LF++ L D V + V + S L AC+ ++ + GA
Sbjct: 154 RNGHPREALGLFRQMDL------------DGVAPNKVTLVSGLDACA--SLGDLRSGALM 199
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H V +G S V VG L++ Y + G ++ + + F ++EK+ V W++I A YA+N
Sbjct: 200 HQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRN 259
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ--VIKMDLEESVIVG 328
+A+ V +M + N+ T +VL A A + L+ G+ IH++ V+ LE V V
Sbjct: 260 RDAIRVLHRM-DLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVL 318
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
T++++MY KCG + LA F+++ ++ W ++IA H + +AL+LF +M G++
Sbjct: 319 TALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQ 378
Query: 389 PNYITFVSVLSACSHAGLVQEGW-HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P ITF SVL ACSHAG++ +G H+++ +G + I P EH+GCMVDLLGRAG + ++
Sbjct: 379 PTIITFTSVLFACSHAGMLDQGRKHFVSFIG-DHGIFPEAEHFGCMVDLLGRAGWIVDSE 437
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
DL+ M + V W + LGACR ++N+D AA+ LF+L+P +VLLSN+YA AG
Sbjct: 438 DLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAG 497
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RW DV R R M+ K G S +E++ +VH F+ GD +HP+ +I+ L+ L ++
Sbjct: 498 RWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMK 557
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV D V+HDV QE KE + HSEKLA NLRVC DCHT
Sbjct: 558 AAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHT 617
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ ISK+V+REIVVRD RFH F++G CSCGDYW
Sbjct: 618 ASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 199/389 (51%), Gaps = 25/389 (6%)
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
G+ R+ F+ + LID+Y+KC DA +F I +N+ SWT ML + +N +
Sbjct: 4 LGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQS--KNVFSWTMMLAAFAENRDFDRCW 61
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
L F+ LL+ G V I+ LSAC+ + ++ G +
Sbjct: 62 LFFRGMLLQGINPG------------EVGISIFLSACTDAREITIGRSIQLAILGTGIEE 109
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
E V L+ Y + GH + VF M +D V W++++A YA+NG EAL +F QM
Sbjct: 110 ESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQM- 168
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
V N VTL + L A A LG LR G +H +V ++ V+VGT+++++Y KCG++
Sbjct: 169 DLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRI 228
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ A +AF Q+ EKNV +W+A+ A Y + R R+A+ + ++M G+ PN TFVSVL AC
Sbjct: 229 EAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDAC 288
Query: 402 SHAGLVQEGWHW---LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
+ +++G ++ +G +E V +V++ + G L A ++ + + D
Sbjct: 289 AAIAALKQGRRIHERIHVLGG--GLESDVYVLTALVNMYSKCGNLALAGNMFDKI-AHLD 345
Query: 459 FVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
V+W SL+ H + A +LFE
Sbjct: 346 LVLWNSLIATNAQHGQTE----KALELFE 370
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 131/271 (48%), Gaps = 5/271 (1%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N LID Y + D + VF G+ K+ +W ++A +A+N F M+ +
Sbjct: 14 NLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQ-GI 72
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
V +S L A + +G+ I ++ +EE IV T+++ +Y K G A
Sbjct: 73 NPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAAS 132
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F +M ++V +W+AM+A Y + REAL LF +M GV PN +T VS L AC+ G
Sbjct: 133 VFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGD 192
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
++ G ++ I+ GV +V+L G+ G+++ A + G V+ + V W ++
Sbjct: 193 LRSG-ALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAF-GQIVEKNVVAWSAIS 250
Query: 467 GA-CRIHKNVDLGEIAAKKLFE-LEPNNCGY 495
A R +N D + + E L PN+ +
Sbjct: 251 AAYARNDRNRDAIRVLHRMDLEGLAPNSTTF 281
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 17/217 (7%)
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+ID+Y KC + D A F+ ++ KNV SWT M+A + + F M+ G+ P
Sbjct: 16 LIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPG 75
Query: 391 YITFVSVLSACSHAGLVQEGWH-WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ LSAC+ A + G L +G E V+ +V L G+ G +A +
Sbjct: 76 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQ--TALVSLYGKLGHCTDAASV 133
Query: 450 IEGMKVKADFVVWGSLLGAC--RIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
M + D V W +++ A H LG L + PN L+S + A A
Sbjct: 134 FLRMSHR-DVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKV---TLVSGLDACAS 189
Query: 508 RWEDVERTRSLMKNRRLAK------TPGFSLVELRGK 538
+ R+ +LM R A+ G +LV L GK
Sbjct: 190 LGD--LRSGALMHQRVEAQGIQSGVVVGTALVNLYGK 224
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/587 (37%), Positives = 342/587 (58%), Gaps = 40/587 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID---MYSKCGELSDARKLFDEIPQ 136
+ C++L++L KQ D+ V + LI+ + + A LFD+I
Sbjct: 36 LSKCTSLNEL---KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILD 92
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
+ +I+ + M GY ++++ A LF E L C G + D +S+L
Sbjct: 93 K--DIILFNIMARGYARSNSPYLAFSLFGELL-----CSG-------LLPDDYTFSSLLK 138
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
AC+ G H F +K G + + + TLI+ YA ++ +R VFD M + V+
Sbjct: 139 ACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVS 198
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
+N+II YA++ EAL +F ++ ++++++ VT+ +V+++ A LG L LGK IH+ V
Sbjct: 199 YNAIITGYARSSQPNEALSLFREL-QASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYV 257
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
K ++ V V T++IDM+ KCG + A F M+ ++ ++W+AMI + H +A+
Sbjct: 258 KKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAI 317
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDL 436
+F +M + GVRP+ ITF+ +L ACSHAGLV++G + +M + I PG++HYGCMVDL
Sbjct: 318 SMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDL 377
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYH 496
LGRAG L EAY+ ++ +++KA ++W +LL AC H NV++ + +++FEL+ + G +
Sbjct: 378 LGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDY 437
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
V+LSN+YA GRWEDV R LMK+R + K PG S VE+ VH F GD H ++
Sbjct: 438 VILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELR 497
Query: 557 EYLEELNVKLQEVGYVTDMTSVIH-DVDQEEKEMTLRIHSEKLA---------------- 599
L+EL +++ VGYV D + V H D+++E KE+ LR HSEKLA
Sbjct: 498 RALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRV 557
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCH +LIS + R+IV+RD +RFH F+DG CSCGD+W
Sbjct: 558 AKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 148/283 (52%), Gaps = 16/283 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ +DK+ + +N + AR A F + L P TF +K+C++
Sbjct: 86 LFDQILDKD-IILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSK 144
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G H A G + ++++ LI+MY++C +++ AR +FDE+ Q IVS+ ++
Sbjct: 145 ALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPC--IVSYNAI 202
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+TGY ++ EAL LF+E + N+ V + SV+ +C+ + +
Sbjct: 203 ITGYARSSQPNEALSLFREL------------QASNIEPTDVTMLSVIMSCALLGALDLG 250
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H +V K+GFD V V LID +A+ G + + +F+GM +D W+++I +A +
Sbjct: 251 KWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATH 310
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
G +A+ +F++M K V+ + +T +L A +H G++ G+
Sbjct: 311 GDGLKAISMFEEM-KREGVRPDEITFLGLLYACSHAGLVEQGR 352
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 127/258 (49%), Gaps = 22/258 (8%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+++ + S+N++I AR EAL F ++ ++ PT T I SC+ L L G
Sbjct: 191 MEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLG 250
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K H+ GF + V V++ALIDM++KCG L+DA +F+ + R+R+ +W++M+ +
Sbjct: 251 KWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM--RVRDTQAWSAMIVAFA 308
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ + +A+ +F+E + V D + +L ACS G+ E G
Sbjct: 309 THGDGLKAISMFEEM------------KREGVRPDEITFLGLLYACSHA---GLVEQGRG 353
Query: 213 FV--IKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQN 267
+ + + + G+ + ++D R GH+D + D + I+ + W ++++ + +
Sbjct: 354 YFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTH 413
Query: 268 GLAAEALDVFDQMVKSTD 285
G A V +++ + D
Sbjct: 414 GNVEMAKRVIERIFELDD 431
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/621 (36%), Positives = 348/621 (56%), Gaps = 74/621 (11%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL---SDARKLFDEIPQ 136
++ CS+L+ K+ H Q +I + +V + L+ + + + S R LF ++
Sbjct: 15 LERCSSLNQ---AKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQL-- 69
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
N +WT+++ Y +AL + +S V S +++ S
Sbjct: 70 HTPNPFAWTALIRAYALRGPLSQALSFY------------SSMRKRRVSPISFTFSALFS 117
Query: 197 ACSRVTVNGVTEGAHG-FVIKRGFDSEVGVGNTLID------------------------ 231
AC+ V + + H ++ GF S++ V N +ID
Sbjct: 118 ACAAVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVI 177
Query: 232 -------AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
AY R G + +R +FDG+ KD VTW +++ YAQN + +AL+VF ++ +
Sbjct: 178 SWTGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRL-RDE 236
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHD--QVIKMDLEESVIVGTSIIDMYCKCGQVD 342
V+ + VTL V+ A A LG + I D + + ++V+VG+++IDMY KCG V+
Sbjct: 237 GVEIDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVE 296
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
A F M+E+NV S+++MI G+ +H RAR A+ LFY M++ GV+PN++TFV VL+ACS
Sbjct: 297 EAYDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACS 356
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW 462
HAGLV +G +M + + P E Y CM DLL RAG L++A L+E M +++D VW
Sbjct: 357 HAGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVW 416
Query: 463 GSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNR 522
G+LLGA +H N D+ EIA+K+LFELEP+N G ++LLSN YA+AGRW+DV + R L++ +
Sbjct: 417 GALLGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREK 476
Query: 523 RLAKTPGFSLVELR-GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHD 581
L K PG+S VE + G +H F+ GD HP+ +I + L +L +L+ +GY +++S+ +
Sbjct: 477 NLKKNPGWSWVEAKNGMIHKFVAGDVSHPKINEIKKELNDLLERLKGIGYQPNLSSLPYG 536
Query: 582 VDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIV 623
++ EK + L HSEKLA NLR+C DCH V+ SKV R+IV
Sbjct: 537 INDREKRLLLMAHSEKLALAFGLLSTDVGSTIKIMKNLRICEDCHIVMCGASKVTGRKIV 596
Query: 624 VRDSKRFHYFKDGLCSCGDYW 644
VRD+ RFH+F +G CSC ++W
Sbjct: 597 VRDNTRFHHFLNGACSCSNFW 617
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 192/401 (47%), Gaps = 51/401 (12%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L+K + + + +V HS L + N F+W ++I A G +AL +S
Sbjct: 43 LTKLLRLVTALPHVPLHS----YPRLLFSQLHTPNPFAWTALIRAYALRGPLSQALSFYS 98
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFG-FHRDVFVSSALIDMYSKC 121
SMRK ++P TF +C+A+ G Q H Q + G F D++V++A+IDMY KC
Sbjct: 99 SMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKC 158
Query: 122 GELSDARKLFDEIPQR-----------------------------IRNIVSWTSMLTGYV 152
G L AR +FDE+P+R ++++V+WT+M+TGY
Sbjct: 159 GSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYA 218
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN +AL +F+ + V +D V + V+SAC+++ +
Sbjct: 219 QNAMPMDALEVFRRL------------RDEGVEIDEVTLVGVISACAQLGASKYANWIRD 266
Query: 213 FVIKRGF--DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
GF V VG+ LID Y++ G+V+ + VF GM E++ +++S+I +A +G A
Sbjct: 267 IAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFAIHGRA 326
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGT 329
A+ +F M++ T VK N VT VL A +H G++ G+ + + K + + +
Sbjct: 327 RAAIKLFYDMLE-TGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELYA 385
Query: 330 SIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+ D+ + G ++ A + M E + W A++ +H
Sbjct: 386 CMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVH 426
>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
Length = 739
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/667 (34%), Positives = 363/667 (54%), Gaps = 70/667 (10%)
Query: 29 FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD 88
F++ KN VFSW VI+ A+ G EAL F M + + T + CS++ D
Sbjct: 92 FDRIAAKN-VFSWTIVISAFAQNGHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKD 150
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L G+ H + + +DV + +AL++MYSKCG L +AR F E+ +R++VSWT+M+
Sbjct: 151 LAGGRSIHGR--VIAAKKDVVIGNALVNMYSKCGSLREARASFQEMV--VRDVVSWTTMI 206
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
T ++ EA+ +F E + S+NV + ++ +VL ACS +
Sbjct: 207 TALSEHGEWNEAVEIFWEMV------------SENVAPNEISCLAVLGACSNLGDRSQVR 254
Query: 209 GAHGFVIKRGF--DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE--KDAVTWNSIIAIY 264
H F+ G D ++ V NTLI Y R G +R+VFD + ++AV+W S+IA Y
Sbjct: 255 VIHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDARRVFDSLQHSARNAVSWASMIAAY 314
Query: 265 AQNGLAAEALDVFDQMVKSTDVK-CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
N A ++++ +M++ + K + V VL A + L L++G+ +H++++ +
Sbjct: 315 TSNEQAKAGVELYQEMIQREESKKMDPVAYLCVLEACSSLSALKVGRQVHEEIVAAGFGD 374
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+ + +I++MYCKCG + AR+ F+ MK +N+ +W +M+ GY H + AL LF
Sbjct: 375 ELPLAGAIVNMYCKCGSLVEAREVFDGMKARNMIAWNSMMGGYTQHGHPKRALQLFELAC 434
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEG-WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
GV P+ ITFV++L+ACSHAG+V+ G WH ++ +F +EP V+HY CMVD+LGRAG
Sbjct: 435 LDGVLPDEITFVTILTACSHAGMVKPGVWH-FGSIRADFGMEPSVDHYVCMVDMLGRAGW 493
Query: 443 LKEAYDLIEGMKVKA----DFVVWGSLLGACRIHKNVDLG-----------------EIA 481
L A L+E M + +FV W +LL +C++H +V +
Sbjct: 494 LDAAERLVERMPAFSNPADEFVPWMALLASCKVHTDVKRAARISSVLSAKKKKLLSSSSS 553
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDV-----ERTRSLMKNRRLAKTPGFSLVELR 536
+ L+ N+ V+LSNIYA A +WE++ E T K ++ G S +E+
Sbjct: 554 GSGSWHLK-NSAAPLVMLSNIYAQAKKWEEMTGVRNEITEEWSKGMITSRQRGCSFIEVE 612
Query: 537 GKVHAFLVGDKE-HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHS 595
G +H F+ G HP+H+ I ++ L ++ GYV D + V+HDV++ EKE L HS
Sbjct: 613 GAIHEFVAGKLHLHPEHKGIDSEMKRLEELIKSAGYVPDTSVVMHDVEEAEKEGVLHQHS 672
Query: 596 EKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGL 637
E++A NLR+C DCH ++LISK V REI+VRD++RFH+F G
Sbjct: 673 ERMAIAFGLMRGGSDTIVRVVNNLRICSDCHAAVKLISKTVGREILVRDTRRFHHFASGE 732
Query: 638 CSCGDYW 644
CSC DYW
Sbjct: 733 CSCQDYW 739
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 209/406 (51%), Gaps = 37/406 (9%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ H + G D ++ + L+ +Y K G L A FD I + N+ SWT +++ +
Sbjct: 54 EELHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAK--NVFSWTIVISAFA 111
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN + REAL+LF++ + V + V +A+VL CS + HG
Sbjct: 112 QNGHHREALVLFRQM------------EREGVKANEVTLAAVLGICSSIKDLAGGRSIHG 159
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
VI D V +GN L++ Y++ G + +R F M+ +D V+W ++I +++G E
Sbjct: 160 RVIAAKKD--VVIGNALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNE 217
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK--MDLEESVIVGTS 330
A+++F +MV S +V N ++ AVL A ++LG + IH+ + ++L++ ++V +
Sbjct: 218 AVEIFWEMV-SENVAPNEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANT 276
Query: 331 IIDMYCKCGQVDLARKAFNQMKE--KNVRSWTAMIAGYGMHCRAREALDLFYKMIK--AG 386
+I Y +CG AR+ F+ ++ +N SW +MIA Y + +A+ ++L+ +MI+
Sbjct: 277 LIHTYGRCGSPSDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREES 336
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRAGK 442
+ + + ++ VL ACS ++ G HE + G + G +V++ + G
Sbjct: 337 KKMDPVAYLCVLEACSSLSALKVG-----RQVHEEIVAAGFGDELPLAGAIVNMYCKCGS 391
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
L EA ++ +GMK + + + W S++G H + A +LFEL
Sbjct: 392 LVEAREVFDGMKAR-NMIAWNSMMGGYTQHGHPK----RALQLFEL 432
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/609 (36%), Positives = 336/609 (55%), Gaps = 77/609 (12%)
Query: 109 FVSSALIDMYSKCGELSD---ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
FV + L+ C +D AR +FDEIP + W +M+ Y+ + N +E++ LF
Sbjct: 36 FVLAKLLRRLFACSSANDLLYARSVFDEIPSP--DTFIWNTMIRAYLNSQNPQESMSLFF 93
Query: 166 EFLLEE-------------SECGGASENSD---------------NVFVDSVAIASVLSA 197
+ +E CG + + ++FV++ A+ + +
Sbjct: 94 QMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVET-ALIEMYAK 152
Query: 198 CSRVTV--NGVTEGAHGFVIK----------------------RGFDSEVGVGNTLIDAY 233
+ + N + E AH ++ R + ++ NT+I +
Sbjct: 153 FGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGH 212
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
A G V ++K+FD E+D ++W+S+IA YA+ + EAL +F +M + +V + VT+
Sbjct: 213 ASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEM-QLANVLPDKVTM 271
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
+VL A +G L +GK IH+ + + +E + +GTS++DMY KCG +D + + FN M
Sbjct: 272 VSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNN 331
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
++V +W+AMI G H ALD F KMI ++PN +TF+ VLSACSH GLV EGW +
Sbjct: 332 RDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTY 391
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
+M +++ P +EHYGC+VD+LGRAG+L+EA +LI+ M D +VW +LLGACRI+K
Sbjct: 392 FTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYK 451
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
NV++ E A L ELEP+ G +VLLSNIY+ A W+ V R +MKN + K PG S +
Sbjct: 452 NVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSI 511
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
E+ VH F+ GD+ HP+ +KI L E+ +L+ GY SV+ D D++EKE L
Sbjct: 512 EVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDEKEKENALAH 571
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSEKLA NLRVC DCH I+LIS+ R I+VRD RFH+F +
Sbjct: 572 HSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVN 631
Query: 636 GLCSCGDYW 644
G CSC DYW
Sbjct: 632 GSCSCKDYW 640
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 152/364 (41%), Gaps = 83/364 (22%)
Query: 211 HGFVIKRGFDSEVGVGNTLID---AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H +IK D V L+ A + + +R VFD + D WN++I Y +
Sbjct: 23 HALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYLNS 82
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
E++ +F QM + ++ +LS V+ A L G+ +H QV+K+ L + V
Sbjct: 83 QNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFV 142
Query: 328 GTSIIDMYCKCGQVDLARKA-------------------------------FNQMKEKNV 356
T++I+MY K G +++AR F++M E+++
Sbjct: 143 ETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDL 202
Query: 357 RSW-------------------------------TAMIAGYGMHCRAREALDLFYKMIKA 385
SW ++MIA Y ++ EAL LF++M A
Sbjct: 203 VSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLA 262
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF----NIEPGVEHYGCMVDLLGRAG 441
V P+ +T VSVLSAC G + G M HE IE ++ +VD+ + G
Sbjct: 263 NVLPDKVTMVSVLSACGDVGALGMG-----KMIHECIERNRIEIDLKLGTSLVDMYAKCG 317
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA----AKKLFE-LEPNNCGYH 496
+ + + GM + D W +++ H GE+A +K + E ++PN+ +
Sbjct: 318 DIDNSLRVFNGMNNR-DVFAWSAMIMGLANH---GFGELALDHFSKMISEDIKPNDVTFI 373
Query: 497 VLLS 500
+LS
Sbjct: 374 GVLS 377
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 125/253 (49%), Gaps = 24/253 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ +++ + SW+S+IA A+ S EALR F M+ ++ P + T + +C +
Sbjct: 224 LFDRTCERD-LISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVG 282
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H+ D+ + ++L+DMY+KCG++ ++ ++F+ + R++ +W++M
Sbjct: 283 ALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNN--RDVFAWSAM 340
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G + AL F + + S+++ + V VLSACS + + V
Sbjct: 341 IMGLANHGFGELALDHFSKMI------------SEDIKPNDVTFIGVLSACSHIGL--VD 386
Query: 208 EGAHGFV-IKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA- 262
EG F + + +D + + ++D R G + + ++ M DA+ W +++
Sbjct: 387 EGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGA 446
Query: 263 --IYAQNGLAAEA 273
IY +A EA
Sbjct: 447 CRIYKNVEIAEEA 459
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/608 (37%), Positives = 342/608 (56%), Gaps = 33/608 (5%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D NV SW S+I L R +AL F+ MR+ + P TF + +C+ G+
Sbjct: 91 DSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGE 150
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H + GF +VFV SAL+DMY+KC ++ A K+F+E+P +RN+VSW +M+ G++Q
Sbjct: 151 QMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMP--VRNLVSWNTMIVGFLQ 208
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N +A+ FK LLE +D V+ +SV SAC+ + HG
Sbjct: 209 NKLYDQAIFFFKTLLLENLTA-----------LDEVSFSSVFSACANAGNLEFGKQVHGV 257
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+K G + V + N+L D Y + G + K+F +D VTWN +I Y N +A
Sbjct: 258 ALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDA 317
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+ F M + + A + S+VL + A+L L G IH+Q+I+ +++ V +S+I
Sbjct: 318 CNSFWMMRRKGSIPDEA-SYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLIT 376
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY KCG + A + F + +++NV WTA+IA H A ++LF +M++ G++P+YIT
Sbjct: 377 MYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYIT 436
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
FVSVLSACSH G V+EG+ + N+M I PG EHY C+VDLL RAG+L A IE M
Sbjct: 437 FVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELM 496
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
+K D VWG+LL ACR H N+ +G+ A KLF+LEP+N G +VLL NI G + +
Sbjct: 497 PIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEAD 556
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
R M++ + K PG S ++++ + F V DK H + ++IYE LE+L +++ GYV
Sbjct: 557 EVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVA 616
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
+ I + +E KE +L HSEK+A NLR CGDCHTV++ S
Sbjct: 617 ETEFAI-NTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFAS 675
Query: 616 KVVDREIV 623
++ REI+
Sbjct: 676 EIFAREII 683
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 195/424 (45%), Gaps = 35/424 (8%)
Query: 66 KLSLTPTRSTFPCAIKSCSALHDLHS-------------GKQAHQQAFIFGFHRDVFVSS 112
KL L P S F LH L S Q H Q F+ +
Sbjct: 7 KLPLHPNLSFFKSHYHQTPFLHPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFN 66
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
L+++Y+KCG + LF P +N+VSWTS++T + +AL F
Sbjct: 67 NLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHM----- 121
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
V+ + ++VLSAC+ T + E H V K GF +EV V + L+D
Sbjct: 122 -------RRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDM 174
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
YA+ + ++ KVF+ M ++ V+WN++I + QN L +A+ F ++ + V+
Sbjct: 175 YAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVS 234
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
S+V A A+ G L GK +H +K+ + V + S+ DMY KCG + K F+
Sbjct: 235 FSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTG 294
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
++V +W MI Y + +A + F+ M + G P+ ++ SVL +C++ + +G
Sbjct: 295 ARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQG-- 352
Query: 413 WLNTMGHEFNIEPG----VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
T+ H I G + ++ + + G L +A+ + E + + + V W +++ A
Sbjct: 353 ---TLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDR-NVVCWTAIIAA 408
Query: 469 CRIH 472
C+ H
Sbjct: 409 CQQH 412
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 313/516 (60%), Gaps = 31/516 (6%)
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ GY+ ++ ++AL LF L+ +S E SD + +A+ AC + +
Sbjct: 1 MMFGYIIGNDGKKALELFS--LIHKS-----GEKSDQI-----TLATAAKACGCLVLLDQ 48
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H IK GFDS++ V + ++D Y + G + + VF+ + D V W S+I+
Sbjct: 49 GKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVD 108
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG +AL ++ +M +S V + T + ++ A + + L G+ +H VIK+D
Sbjct: 109 NGNEDQALRIYHRMRQSR-VMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPF 167
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
VGTS++DMY KCG ++ A + F +M +N+ W AM+ G H A EA++LF M G
Sbjct: 168 VGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHG 227
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+ P+ ++F+ +LSACSHAGL E + +L++M +++ IEP +EHY C+VD LGRAG ++EA
Sbjct: 228 IEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEA 287
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
+IE M KA + +LLGACRI +V+ G+ A +LF LEP + +VLLSNIYA A
Sbjct: 288 DKVIETMPFKASASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAA 347
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
RW+DV R +MK + + K PGFS ++++ +H F+V D+ HPQ + IY+ +EE+ +
Sbjct: 348 NRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTI 407
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+E GYV D V+ DV+ EEKE +L HSEKLA NLRVCGDCH
Sbjct: 408 REDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCH 467
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+ ISKV +REIV+RD+ RFH+F+DG+CSCGDYW
Sbjct: 468 NAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 503
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 150/316 (47%), Gaps = 16/316 (5%)
Query: 51 GGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFV 110
G D +AL FS + K + T A K+C L L GKQ H A GF D+ V
Sbjct: 8 GNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHV 67
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+S ++DMY KCG++ +A +F+ I + V+WTSM++G V N N +AL ++
Sbjct: 68 NSGILDMYIKCGDMVNAGIVFNYISA--PDDVAWTSMISGCVDNGNEDQALRIYHRM--- 122
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI 230
V D A+++ A S VT H VIK S+ VG +L+
Sbjct: 123 ---------RQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLV 173
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
D YA+ G+++ + ++F M ++ WN+++ AQ+G A EA+++F M KS ++ +
Sbjct: 174 DMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSM-KSHGIEPDR 232
Query: 291 VTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
V+ +L A +H G+ + +H +E + + ++D + G V A K
Sbjct: 233 VSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIE 292
Query: 350 QMKEKNVRSWTAMIAG 365
M K S + G
Sbjct: 293 TMPFKASASINRALLG 308
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 114/237 (48%), Gaps = 16/237 (6%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKS 82
N +FN Y+ + +W S+I+ G+ +ALR + MR+ + P TF IK+
Sbjct: 82 VNAGIVFN-YISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKA 140
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
S + L G+Q H D FV ++L+DMY+KCG + DA +LF ++ +RNI
Sbjct: 141 SSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM--NVRNIA 198
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
W +ML G Q+ NA EA+ LFK S S + D V+ +LSACS
Sbjct: 199 LWNAMLVGLAQHGNAEEAVNLFK------------SMKSHGIEPDRVSFIGILSACSHAG 246
Query: 203 VNG-VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ E H G + E+ + L+DA R G V + KV + M K + + N
Sbjct: 247 LTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 303
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 13 VSNVDKHSTNTNLTTLFNKYVDKN--NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT 70
S VD ++ N+ + + N N+ WN+++ LA+ G++ EA+ F SM+ +
Sbjct: 170 TSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIE 229
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFI------FGFHRDVFVSSALIDMYSKCGEL 124
P R +F + +CS H+G + ++ +G ++ S L+D + G +
Sbjct: 230 PDRVSFIGILSACS-----HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLV 284
Query: 125 SDARKLFDEIP 135
+A K+ + +P
Sbjct: 285 QEADKVIETMP 295
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/660 (34%), Positives = 355/660 (53%), Gaps = 39/660 (5%)
Query: 8 SVSSVVSNVDKHSTNTNL---TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
SV + + V+ +ST L +LF + + + +V SWN++I+ + VEAL +
Sbjct: 280 SVPLINALVNMYSTAGKLDEAESLF-RNMSRRDVISWNTMISSYVQSNSCVEALETLGQL 338
Query: 65 RKLSLTPTRS-TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
+ P S TF A+ +CS+ L +G+ H + + ++L+ MYSKC
Sbjct: 339 LQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNS 398
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+ D ++F+ +P ++VS + GY ++ A+ +F
Sbjct: 399 MEDTERVFESMP--CYDVVSCNVLTGGYAALEDVANAMRVFSWM------------RGTG 444
Query: 184 VFVDSVAIASVLSACSRV-TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
+ + + + ++ C + ++ H +V + G S+ + N+LI YA G ++ S
Sbjct: 445 IKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESS 504
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
+F + K ++WN+IIA ++G EA+ +F + + K + L+ L + A+
Sbjct: 505 TGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGN-KLDRFCLAECLSSSAN 563
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
L L G +H +K L+ V + +DMY KCG++D K + + W +
Sbjct: 564 LASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTL 623
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
I+GY + +EA D F M+ G +P+Y+TFV++LSACSHAGL+ +G + N+M F
Sbjct: 624 ISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFG 683
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
+ PG++H C+VDLLGR GK EA I+ M V + ++W SLL + R HKN+D+G AA
Sbjct: 684 VSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAA 743
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
K L EL+P + +VLLSN+YA RW DV++ RS MK +L K P S ++L+ +V F
Sbjct: 744 KNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTF 803
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
+GD+ H EKIY L+E+ +KL+EVGYV D +S +HD D+E+KE L HSEKLA
Sbjct: 804 GIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAY 863
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH V +L+S V REIV+RD RFH FK G CSC D+W
Sbjct: 864 GLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 178/373 (47%), Gaps = 14/373 (3%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW +++ L+ G EAL A+ MRK + + + C AL D +G
Sbjct: 105 MPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAG 164
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q + G V V+++LI M+ + DA +LFD + +R R +SW +M++ Y
Sbjct: 165 LQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDR--ISWNAMISMYS 222
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ + ++ + E V D + S++S C+ + + G H
Sbjct: 223 HEEVYSKCFIVLSDMRHGE------------VKPDVTTLCSLVSVCASSDLVALGSGIHS 270
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ G V + N L++ Y+ G +D + +F M +D ++WN++I+ Y Q+ E
Sbjct: 271 LCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVE 330
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL+ Q++++ + N++T S+ L A + L G+ IH +++ L+ +++G S++
Sbjct: 331 ALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLL 390
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
MY KC ++ + F M +V S + GY A+ +F M G++PNYI
Sbjct: 391 TMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYI 450
Query: 393 TFVSVLSACSHAG 405
T +++ C G
Sbjct: 451 TMINLQGTCKSLG 463
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 180/382 (47%), Gaps = 33/382 (8%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA---- 95
SW + ++ AR G A MR+ + + + +C H G Q
Sbjct: 8 SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACE-----HRGWQEGAAC 62
Query: 96 ----HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
H G +V++ +AL+ +Y G + +A++LF E+PQ RN+VSWT+++
Sbjct: 63 GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQ--RNVVSWTAIMVAL 120
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV--TVNGVTEG 209
N EAL+ ++ + V ++ A+A+V+S C + V G+
Sbjct: 121 SSNGCMEEALVAYRRM------------RKEGVMCNANALATVVSLCGALEDEVAGLQVT 168
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
AH V+ G + V V N+LI + V + ++FD M E+D ++WN++I++Y+ +
Sbjct: 169 AH--VVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEV 226
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
++ V M + +VK + TL +++ A ++ LG IH + L SV +
Sbjct: 227 YSKCFIVLSDM-RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLIN 285
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV-R 388
++++MY G++D A F M ++V SW MI+ Y EAL+ ++++
Sbjct: 286 ALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGP 345
Query: 389 PNYITFVSVLSACSHAGLVQEG 410
PN +TF S L ACS + G
Sbjct: 346 PNSMTFSSALGACSSPEALMNG 367
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 12/292 (4%)
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGA------HGFVIKRGFDSEVGVGNTLIDAYARG 236
+V + A+AS+++AC G EGA H + G V +G L+ Y
Sbjct: 36 DVPLSGFALASLVTACEH---RGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSR 92
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G V ++++F M +++ V+W +I+ + NG EAL + +M K V CNA L+ V
Sbjct: 93 GLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKE-GVMCNANALATV 151
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
+ L G + V+ L V V S+I M+ +V A + F++M+E++
Sbjct: 152 VSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDR 211
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW AMI+ Y + + M V+P+ T S++S C+ + LV G +++
Sbjct: 212 ISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALG-SGIHS 270
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ + V +V++ AGKL EA L M + D + W +++ +
Sbjct: 271 LCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMS-RRDVISWNTMISS 321
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 107/223 (47%), Gaps = 10/223 (4%)
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M + + +W + ++ A+ GL + A + ++++ DV + L++++ A H G
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLL-RVMRERDVPLSGFALASLVTACEHRGWQEG 59
Query: 309 GKC---IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
C IH + L +V +GT+++ +Y G V A++ F +M ++NV SWTA++
Sbjct: 60 AACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVA 119
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF--NI 423
+ EAL + +M K GV N +V+S C G +++ L H +
Sbjct: 120 LSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLC---GALEDEVAGLQVTAHVVVSGL 176
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V ++ + G ++++A L + M+ + D + W +++
Sbjct: 177 LTHVSVANSLITMFGNLRRVQDAERLFDRMEER-DRISWNAMI 218
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/627 (34%), Positives = 343/627 (54%), Gaps = 36/627 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRK-LSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
++ +WNS++ G AL F M + L + A+ +C L G++
Sbjct: 173 DIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREV 232
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H G +DV V ++L+DMY KCG ++ A +F +P R +V+W M+ GY N
Sbjct: 233 HAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSR--TVVTWNCMIGGYALNG 290
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
EA F + E + V+ V ++L+AC++ + HG+V
Sbjct: 291 CPEEAFDCFVQMKAEGHQ------------VEVVTAINLLAACAQTESSLYGRSVHGYVT 338
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+ F V + L++ Y++ G V S +F M K V+WN++IA Y + EA+
Sbjct: 339 RSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAIT 398
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F +++ + + T+SAV+ A LG+LR + +H ++++D E+ +V +++ MY
Sbjct: 399 LFLELLNQP-LYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMY 457
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
+CG V +RK F++M K+V SW +I GY +H + + AL++F +M G++PN TFV
Sbjct: 458 ARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFV 517
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
SVL+ACS +G+ EGW N M ++ I P +EHYGCM DLLGRAG L+E IE + +
Sbjct: 518 SVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPI 577
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
F +WGSLL A R ++D+ E AA+++FELE +N G +V+LS++YA+AGRWEDV+R
Sbjct: 578 TPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRI 637
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
RS M + L +T S+VEL G +F+ GD HPQ + I+E + L+ K+ E Y ++
Sbjct: 638 RSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTHPQSKTIHEVSDVLSRKIGETDYPRNL 697
Query: 576 TSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKV 617
+ I + + + HS +LA N+R+C CH ++LISK
Sbjct: 698 SDPISLTSR--RTIIPNKHSVRLAVVFGLISSEARAPILVKKNVRICNHCHHALKLISKY 755
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
R IVV D+ +H F DG C CGDYW
Sbjct: 756 SRRRIVVGDTNIYHEFLDGSCCCGDYW 782
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 215/461 (46%), Gaps = 30/461 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+ F N VI A G AL A+ +M P R TFP +K C+ L L G+ AH
Sbjct: 71 DAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAH 130
Query: 97 QQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
A G +V+ ++L+ Y+K G ++DA ++FD +P +R+IV+W SM+ GYV N
Sbjct: 131 SAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMP--VRDIVTWNSMVDGYVSNG 188
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
AL F+E V D V I + L+AC + H +VI
Sbjct: 189 LGALALDCFREM-----------HEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVI 237
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+ G + +V VG +L+D Y + G + + +F M + VTWN +I YA NG EA D
Sbjct: 238 RHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFD 297
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
F QM K+ + VT +L A A G+ +H V + V++ T++++MY
Sbjct: 298 CFVQM-KAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMY 356
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
K G+V + F QM K + SW MIA Y EA+ LF +++ + P+Y T
Sbjct: 357 SKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMS 416
Query: 396 SVLSACSHAGLVQEGWHWLNTM-----GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+V+ A GL+++ + + G + V H + R G + + +
Sbjct: 417 AVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMH------MYARCGDVVSSRKIF 470
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPN 491
+ M K D + W +++ IH G+IA + E++ N
Sbjct: 471 DKMAGK-DVISWNTIIMGYAIHGQ---GKIALEMFSEMKSN 507
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/631 (34%), Positives = 344/631 (54%), Gaps = 34/631 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSALHDLHS 91
+ + NV SW +++ G E L+ F SM + P KSCS+ +
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEE 154
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
GKQ H G FV + L+ MYS C +A ++ D++P ++ ++S L+GY
Sbjct: 155 GKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLP--YCDLSVFSSALSGY 212
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
++ +E + + E+ + +D++ S L CS + + H
Sbjct: 213 LECGAFKEGAEVLRRMAKED------------LVLDNITYLSCLRLCSNLRDLNLARQIH 260
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+++ GF+SEV +I+ Y + G V +++VFD ++ V +I+ Y Q+
Sbjct: 261 SRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFE 320
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EAL++F +M + +V N T + L +IA L +L+ G +H V+K V+VG ++
Sbjct: 321 EALNLFSKM-DTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNAL 379
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
++MY K G ++ ARKAF+ M +++ +W MI G+ H RE L+ F +M+ AG PN
Sbjct: 380 VNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNR 439
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
ITF+ VL ACSH G V++G ++ N + +FN++P ++HY C+V LL +AG K+A D +
Sbjct: 440 ITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMR 499
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
++ D V W +LL AC + +N LG+ A+ PN+ G +VLLSNI+A + WE
Sbjct: 500 TAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEG 559
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
V RSLM R + K PG S + +R + H FL + +HP+ IY ++E+ K++ +GY
Sbjct: 560 VAEVRSLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGY 619
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
D+ V HDVD+E++E L HSEKLA N+R+C DCH+ I+L
Sbjct: 620 SPDVAGVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRICDDCHSAIKL 679
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
ISK+ R IV+RDS RFH+F+DG CSC DYW
Sbjct: 680 ISKISKRYIVIRDSNRFHHFRDGQCSCCDYW 710
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 202/425 (47%), Gaps = 36/425 (8%)
Query: 56 EALRAFSSMRKLSLTPTRSTFPC-----AIKSCSALHDLHSGKQAHQQAFIFGFH---RD 107
+ L + + L P + FP +K C+ L +G+ H + +D
Sbjct: 9 QRLLKWDKLASLVPKPKKPLFPIDRLNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKD 68
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
V+ ++LI++Y KCGE ARK+FD +P+ RN+VSW +M+ GY + E L LFK
Sbjct: 69 VYQINSLINLYVKCGETVRARKVFDLMPE--RNVVSWCAMMKGYQNSGFDFEVLKLFKSM 126
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGV 225
+ + E+ N FV +V V +CS + + EG HG +K G S V
Sbjct: 127 VFSD-------ESRPNEFVATV----VFKSCS--SSGRIEEGKQFHGCFLKSGLMSHEFV 173
Query: 226 GNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD 285
NTL+ Y+ + +V D + D ++S ++ Y + G E +V +M K D
Sbjct: 174 RNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKE-D 232
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
+ + +T + L ++L L L + IH +++++ V +II+MY KCG+V A+
Sbjct: 233 LVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQ 292
Query: 346 KAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAG 405
+ F+ +N+ T ++ Y EAL+LF KM V PN TF L++ +
Sbjct: 293 RVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELS 352
Query: 406 LVQEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
L++ G + H ++ G ++ +V++ ++G +++A GM + D V
Sbjct: 353 LLKHG-----DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVT 406
Query: 462 WGSLL 466
W +++
Sbjct: 407 WNTMI 411
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 150/318 (47%), Gaps = 15/318 (4%)
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDS---EVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+L C+ + E HG +I S +V N+LI+ Y + G +RKVFD M
Sbjct: 37 LLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMP 96
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
E++ V+W +++ Y +G E L +F MV S + + N + V + + G + GK
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGK 156
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
H +K L V +++ MY C A + + + ++ +++ ++GY + C
Sbjct: 157 QFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY-LEC 215
Query: 371 RA-REALDLFYKMIKAGVRPNYITFVSVLSACSH---AGLVQEGWHWLNTMGHEFNIEPG 426
A +E ++ +M K + + IT++S L CS+ L ++ + +G FN E
Sbjct: 216 GAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLG--FNSE-- 271
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD--LGEIAAKK 484
VE G ++++ G+ GK+ A + + + + V+ +++ A K+ + L +
Sbjct: 272 VEASGAIINMYGKCGKVLYAQRVFDNTHAQ-NIVLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 485 LFELEPNNCGYHVLLSNI 502
E+ PN + + L++I
Sbjct: 331 TKEVPPNEYTFAISLNSI 348
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/629 (36%), Positives = 354/629 (56%), Gaps = 49/629 (7%)
Query: 58 LRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM 117
+R +++ K + S I SC ++ + KQ H Q ++ L+ +
Sbjct: 1 MRFYTTSAKPFHSDHYSRLVSLIDSCKSMQQI---KQTHAQLITTALISHPVSANKLLKL 57
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY-VQNDNAREALLLFKE---------- 166
+ C LS A KLFD+IPQ ++ + +M+ + + + +L++F+
Sbjct: 58 -AACASLSYAHKLFDQIPQP--DLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPN 114
Query: 167 ---FLLEESECGGA--SENSDNVFVDSVAIA---SVLSACSRVTVNGV--TEGAHGFVIK 216
F+ S CG + + V + +V + +V + + + G G V +
Sbjct: 115 RYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQ 174
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
D ++ NTLI AY G++ +++++FDGM E+D V+W++IIA Y Q G EALD
Sbjct: 175 WAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDF 234
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F +M++ K N TL + L A ++L L GK IH + K +++ + + SIIDMY
Sbjct: 235 FHKMLQ-IGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYA 293
Query: 337 KCGQVDLARKAFNQMKEKN-VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
KCG+++ A + F + K K V W AMI G+ MH EA+++F +M + PN +TF+
Sbjct: 294 KCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFI 353
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
++L+ACSH +V+EG + M ++ I P +EHYGCMVDLL R+G LKEA D+I M +
Sbjct: 354 ALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPM 413
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
D +WG+LL ACRI+K+++ G + + ++PN+ G HVLLSNIY+ +GRW +
Sbjct: 414 APDVAIWGALLNACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARIL 473
Query: 516 RSLMK-NRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTD 574
R + +R K PG S +EL+G H FLVGD+ HPQ +IY +L+E+ KL+ GYV +
Sbjct: 474 REKNEISRDRKKIPGCSSIELKGTFHQFLVGDQSHPQSREIYSFLDEMTTKLKSAGYVPE 533
Query: 575 MTSVIHDVDQEE-KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
+ ++HD+D EE KE L +HSEKLA NLRVCGDCH + IS
Sbjct: 534 LGELLHDIDDEEDKETALSVHSEKLAIAFGLMNTANGTPIRIVKNLRVCGDCHQATKFIS 593
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
KV +R I+VRD R+H+F+DG+CSC DYW
Sbjct: 594 KVYNRVIIVRDRTRYHHFEDGICSCKDYW 622
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 184/407 (45%), Gaps = 66/407 (16%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVE-ALRAFSSMRK-LSLTPTRSTFPCAIKSCSA 85
LF++ + + ++F +N++I + S +L F S+ + L L P R +F A +C
Sbjct: 69 LFDQ-IPQPDLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGN 127
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK------------------------- 120
+ G+Q A G +VFV +ALI MY K
Sbjct: 128 GLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTL 187
Query: 121 ------CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESEC 174
G +S A++LFD + R R++VSW++++ GYVQ EAL F + L +
Sbjct: 188 IAAYVGSGNMSLAKELFDGM--RERDVVSWSTIIAGYVQVGCFMEALDFFHKML----QI 241
Query: 175 GGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYA 234
G + + S L+ACS + + H ++ K + ++ID YA
Sbjct: 242 GPKP--------NEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYA 293
Query: 235 RGGHVD-VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ G ++ SR F+ +++ WN++I +A +G+ EA++VF+QM K + N VT
Sbjct: 294 KCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQM-KVEKISPNKVTF 352
Query: 294 SAVLLAIAHLGVLRLGKC-----IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
A+L A +H ++ GK + D I ++E ++D+ + G + A
Sbjct: 353 IALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHY----GCMVDLLSRSGLLKEAEDMI 408
Query: 349 NQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKM--IKAGVRPNYI 392
+ M +V W A++ CR + ++ Y++ I G+ PN+I
Sbjct: 409 SSMPMAPDVAIWGALLNA----CRIYKDMERGYRIGRIIKGMDPNHI 451
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 120/276 (43%), Gaps = 43/276 (15%)
Query: 20 STNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCA 79
S N +L + + +V SW+++IA + G +EAL F M ++ P T A
Sbjct: 194 SGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSA 253
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+ +CS L L GK H + + +++IDMY+KCGE+ A ++F E + +
Sbjct: 254 LAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVK-Q 312
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+ W +M+ G+ + EA+ +F++ +E+ + + V ++L+ACS
Sbjct: 313 KVWLWNAMIGGFAMHGMPNEAINVFEQMKVEK------------ISPNKVTFIALLNACS 360
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
HG++++ G Y R V D I + +
Sbjct: 361 -----------HGYMVEEG------------KLYFR-------LMVSDYAITPEIEHYGC 390
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
++ + +++GL EA D+ M + DV L+A
Sbjct: 391 MVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNA 426
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
++S++ K + + +F ++ K V+ WN++I A G EA+ F M+
Sbjct: 285 LASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEK 344
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI-FGFHRDVFVSSALIDMYSKCGELSDA 127
++P + TF + +CS + + GK + + ++ ++D+ S+ G L +A
Sbjct: 345 ISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEA 404
Query: 128 RKLFDEIPQRIRNIVSWTSMLTG 150
+ +P ++ W ++L
Sbjct: 405 EDMISSMPMA-PDVAIWGALLNA 426
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/477 (43%), Positives = 300/477 (62%), Gaps = 21/477 (4%)
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D++ + L A +R T H +++RG +++ +G TLIDAYA+ G +D +++VF
Sbjct: 99 DALTFSFSLIASARALALSETSQIHSHLLRRGCHADILLGTTLIDAYAKCGDLDSAQRVF 158
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D + +D WN++IA AQ ++EAL +F++M ++ K N +++ L A + LG L
Sbjct: 159 DEIPLRDVAAWNALIAGLAQGSKSSEALALFNRM-RAEGEKINEISVLGALAACSQLGAL 217
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAG 365
R G+ +H V KMDL+ +V V ++IDMY KCG D + F+ M K+V +W MI
Sbjct: 218 RAGEGVHACVRKMDLDINVQVCNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMA 277
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
+ MH AL+LF +M K V + +T+++VL AC+HAGLV+EG + M +
Sbjct: 278 FAMHGDGCRALELFEEMGKTQVEMDSVTYLAVLCACNHAGLVEEGVRLFDEMVGR-GVNR 336
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
V+HYG +VDLLGRAG+L EAY +I M + D V+W SLLGAC+ + NV++ E+A++KL
Sbjct: 337 NVKHYGSVVDLLGRAGRLGEAYRIINSMPIVPDVVLWQSLLGACKTYGNVEMAEMASRKL 396
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
E+ N+CG VLLSN+YA RWEDV R R MK+R + K PGFS +E+ G +H F+ G
Sbjct: 397 VEMGSNSCGDFVLLSNVYAARERWEDVGRVREAMKSRDVRKVPGFSYIEVEGVIHKFVNG 456
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
D+ HP +IY L+E+ +++ GYV + + V+HD+ +E+KE L HSEKLA
Sbjct: 457 DQSHPDWREIYAKLDEIRFRIKAFGYVAETSLVLHDIGEEDKENALCHHSEKLAVAFGLI 516
Query: 600 ------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCH VI+LISK+ D+EI+VRD RFH FKDG CSC DYW
Sbjct: 517 STSEGTPIRVNKNLRICGDCHVVIKLISKIYDQEIIVRDRARFHRFKDGSCSCRDYW 573
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 171/339 (50%), Gaps = 21/339 (6%)
Query: 29 FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD 88
++++ + +N+++ LARG AL S++ L P TF ++ + +
Sbjct: 60 IHRHIPHPSTNDFNALLRGLARGPHPTHALTFLSTI----LHPDALTFSFSLIASARALA 115
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L Q H G H D+ + + LID Y+KCG+L A+++FDEIP +R++ +W +++
Sbjct: 116 LSETSQIHSHLLRRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIP--LRDVAAWNALI 173
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
G Q + EAL LF E + ++ +++ L+ACS++ E
Sbjct: 174 AGLAQGSKSSEALALFNRMRAEGEK------------INEISVLGALAACSQLGALRAGE 221
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQN 267
G H V K D V V N +ID YA+ G D +VF M K VTWN++I +A +
Sbjct: 222 GVHACVRKMDLDINVQVCNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMH 281
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G AL++F++M K T V+ ++VT AVL A H G++ G + D+++ + +V
Sbjct: 282 GDGCRALELFEEMGK-TQVEMDSVTYLAVLCACNHAGLVEEGVRLFDEMVGRGVNRNVKH 340
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAG 365
S++D+ + G++ A + N M +V W +++
Sbjct: 341 YGSVVDLLGRAGRLGEAYRIINSMPIVPDVVLWQSLLGA 379
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 109/211 (51%), Gaps = 5/211 (2%)
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
ST + +A+T S L+A A L IH +++ +++GT++ID Y KCG +D
Sbjct: 93 STILHPDALTFSFSLIASARALALSETSQIHSHLLRRGCHADILLGTTLIDAYAKCGDLD 152
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
A++ F+++ ++V +W A+IAG ++ EAL LF +M G + N I+ + L+ACS
Sbjct: 153 SAQRVFDEIPLRDVAAWNALIAGLAQGSKSSEALALFNRMRAEGEKINEISVLGALAACS 212
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW 462
G ++ G ++ + +++ V+ ++D+ + G + + + M V W
Sbjct: 213 QLGALRAG-EGVHACVRKMDLDINVQVCNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTW 271
Query: 463 GSLLGACRIH----KNVDLGEIAAKKLFELE 489
+++ A +H + ++L E K E++
Sbjct: 272 NTMIMAFAMHGDGCRALELFEEMGKTQVEMD 302
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+ +V +WN++I A GD AL F M K + T+ + +C+
Sbjct: 258 VFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQVEMDSVTYLAVLCACNHAG 317
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G + + G +R+V +++D+ + G L +A ++ + +P + ++V W S+
Sbjct: 318 LVEEGVRLFDEMVGRGVNRNVKHYGSVVDLLGRAGRLGEAYRIINSMPI-VPDVVLWQSL 376
Query: 148 L 148
L
Sbjct: 377 L 377
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/658 (35%), Positives = 344/658 (52%), Gaps = 42/658 (6%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
S++VS + + + LF +V WN++I ++ G EAL F M +L +
Sbjct: 167 SALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGI 226
Query: 70 TPTRSTFPCAIKSCSALHDLHSG--KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
P TF K+CS+ L + K H G DV V++AL++ Y++CGE+ A
Sbjct: 227 PPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCA 286
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R+ F +P+R N VSWTSM+ + Q + A+ F LLE G +F
Sbjct: 287 REFFAAMPER--NAVSWTSMIAAFAQIGHLL-AVETFHAMLLE-----GVVPTRSTLF-- 336
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
+ L C + + E + G ++V + L+ AYAR + + +VF
Sbjct: 337 -----AALEGCEDLHTARLVEA---IAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFS 388
Query: 248 GMIEK--DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
E DA ++IA+YAQ ++ ++ + + + L A A L
Sbjct: 389 AREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIER-GISPDRILYITALDACASLAA 447
Query: 306 LRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L G+ IH V L+ V +G +I+ MY +CG + AR AF+ M ++ SW AM++
Sbjct: 448 LSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLS 507
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
H R + DLF M++ G + F+++LSAC+HAGLV+ G + M + +
Sbjct: 508 ASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVV 567
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
P EHYGCMVDLLGR G+L +A+ +++ M V D W +L+GACRI+ + + G AA++
Sbjct: 568 PATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAER 627
Query: 485 LFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLV 544
+ EL N+ +V L NIY+ AGRWED R +M + L K PG S +E+R KVH F+V
Sbjct: 628 VLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVV 687
Query: 545 GDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----- 599
D+ HPQ E IY LE + ++ GY V+HDV++E+KE LR HSEKLA
Sbjct: 688 RDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGM 747
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + ISKV REIVVRD +RFH+FKDG CSCGDYW
Sbjct: 748 MSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 214/457 (46%), Gaps = 32/457 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K K+ V W +I+ G S A+ F + + + F + +CS+
Sbjct: 84 VFHKIAHKSIVL-WTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEE 142
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L +G+ H+ A G V+SAL+ MY +CG L DA LF + +R ++V W +M
Sbjct: 143 FLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHL-ERHLDVVLWNAM 201
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+T QN + REAL +F L + D V SV ACS +
Sbjct: 202 ITANSQNGSPREALEIFYRML------------QLGIPPDLVTFVSVFKACSSSPSLRAS 249
Query: 208 E--GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ G H + + G S+V V L++AYAR G +D +R+ F M E++AV+W S+IA +A
Sbjct: 250 QVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFA 309
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q G A++ F M+ V + TL A L L RL + I ++ + V
Sbjct: 310 QIGHLL-AVETFHAMLLEGVVPTRS-TLFAALEGCEDLHTARLVEAIAQEI---GVATDV 364
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW-----TAMIAGYGMHCRAREA-LDLF 379
+ T ++ Y +C + A + F+ +E W TAMIA Y CR R + L+
Sbjct: 365 AIVTDLVMAYARCDGQEDAIRVFSAREEGE---WDAALVTAMIAVYA-QCRDRRSTFKLW 420
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
I+ G+ P+ I +++ L AC+ + EG + + ++ V +V + G+
Sbjct: 421 GAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQ 480
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
G L++A D +GM + D + W ++L A H V+
Sbjct: 481 CGSLRDARDAFDGMPAR-DEISWNAMLSASAQHGRVE 516
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 126/249 (50%), Gaps = 10/249 (4%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+ ++L+ Y R G ++ + VF + K V W +I+ Y G +A A+ +F ++++
Sbjct: 64 LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQE- 122
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
+ +A+ +VL A + L G+ IH ++ L IV ++++ MY +CG + A
Sbjct: 123 GIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDA 182
Query: 345 RKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
F ++ +V W AMI + REAL++FY+M++ G+ P+ +TFVSV ACS
Sbjct: 183 NALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS 242
Query: 404 AGLVQ----EGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
+ ++ +G+H T E + V +V+ R G++ A + M + +
Sbjct: 243 SPSLRASQVKGFH---TCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPER-NA 298
Query: 460 VVWGSLLGA 468
V W S++ A
Sbjct: 299 VSWTSMIAA 307
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/616 (35%), Positives = 344/616 (55%), Gaps = 66/616 (10%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+K C+ + K+ H Q G ++ + + L+D Y KC L DA LFDE+PQR
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQR-- 66
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+ VSW S+LT Y Q + L +F +D + D A++L AC+
Sbjct: 67 DHVSWASILTAYNQAKLPNKTLSIFHYMF-----------TTDRLQPDHFVYATLLKACA 115
Query: 200 RVTVNGVTEGAHG-FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ + + H FV+ D +V V ++L+D YA+ G ++R VFD ++ K +V+W
Sbjct: 116 SLCSLRLGKQVHARFVLSPFVDDDV-VKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWT 174
Query: 259 SIIAIYAQNGLAAEALDVF---------------DQMVKS-----------------TDV 286
++++ YA++GL EA+++F +V+S D+
Sbjct: 175 AMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDI 234
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+ + LS+V+ A A+L VL LGK IH VI E + + +++DMY KC + AR
Sbjct: 235 -VDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARN 293
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
FN+M ++V SWT++I G H RA+EALDL+ +M+ A ++PN +TFV ++ ACSHAGL
Sbjct: 294 VFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGL 353
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V +G M ++ I P ++ + C +DLL R+G L EA DLI+ M K D W +LL
Sbjct: 354 VSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALL 413
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
AC+ H N ++G A +L L + +VLLSN+YA AG+WE + R R LM + + +
Sbjct: 414 SACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKR 473
Query: 527 TPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
PG+S ++L + F G+ HP ++I+ L+EL+ ++++ GY+ D + V+HD++++E
Sbjct: 474 KPGYSSIDLGKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQE 533
Query: 587 KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSK 628
KE L HSE+ A NLR+CGDCHT ++L S +V +EI+VRD+
Sbjct: 534 KERELFWHSERWAVAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDAT 593
Query: 629 RFHYFKDGLCSCGDYW 644
R+H+FKDG CSC D+W
Sbjct: 594 RYHHFKDGRCSCNDFW 609
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 189/367 (51%), Gaps = 31/367 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSAL 86
LF++ +++V SW S++ + + L F M L P + +K+C++L
Sbjct: 59 LFDEMPQRDHV-SWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASL 117
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L GKQ H + + F D V S+L+DMY+KCG S AR +FD I ++ VSWT+
Sbjct: 118 CSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSI--LVKTSVSWTA 175
Query: 147 MLTGYVQNDNAREALLLFKEF--------------LLEESECGGA--------SENSDNV 184
ML+GY ++ EA+ LF L++ C E D
Sbjct: 176 MLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVD-- 233
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
VD + ++SV+ AC+ + V G+ + HG VI G++S + + N L+D YA+ + +R
Sbjct: 234 IVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARN 293
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VF+ M+ +D V+W SII AQ+G A EALD++DQMV + ++K N VT ++ A +H G
Sbjct: 294 VFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLA-EIKPNEVTFVGLIYACSHAG 352
Query: 305 VLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAM 362
++ G+ + +I+ + S+ + T +D+ + G ++ A M K + +W A+
Sbjct: 353 LVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAAL 412
Query: 363 IAGYGMH 369
++ H
Sbjct: 413 LSACKHH 419
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 153/337 (45%), Gaps = 61/337 (18%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS-TFPCAIKSCSALHDLHSGKQA 95
N++SW ++I+ L + G ++ F MR+ + + +C+ L L GKQ
Sbjct: 200 NLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQI 259
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H G+ +F+S+AL+DMY+KC ++ AR +F+ + R++VSWTS++ G Q+
Sbjct: 260 HGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLH--RDVVSWTSIIVGAAQHG 317
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
A+EAL L+ + +L E + + V ++ ACS H ++
Sbjct: 318 RAKEALDLYDQMVLAE------------IKPNEVTFVGLIYACS-----------HAGLV 354
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT-----WNSIIAIYAQNGLA 270
+G RK+F MIE ++ + + + +++G
Sbjct: 355 SKG------------------------RKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHL 390
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE--SVIVG 328
EA D ++K+ K + T +A+L A H G +G I D+++ +++ E + ++
Sbjct: 391 NEAED----LIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLL 446
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
+++ K Q+ RK M+ K ++++ G
Sbjct: 447 SNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLG 483
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/639 (34%), Positives = 355/639 (55%), Gaps = 37/639 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ LF ++K+ V ++NS++ + G + EA+ F + + P+ TF + +
Sbjct: 195 SQLFKHMLNKDTV-TFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVG 253
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L D G+Q H F +VFV +AL+D YSK ++ + KLF E+P+ + +S+
Sbjct: 254 LDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPEL--DGISYN 311
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
++T Y N +E+ LF++ + A++LS +
Sbjct: 312 VVITSYAWNGQFKESFDLFRKLQFTRFD------------RRQFPFATLLSIATSSLNLR 359
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H I G + E V N L+D YA+ ++K+FD + K V W ++I+ Y
Sbjct: 360 MGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYV 419
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q G E ++VF M + T V + T +++L A A+L + LG+ +H +I+ +V
Sbjct: 420 QKGKHEEGINVFSDM-RRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNV 478
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
G++++D Y KCG + A K+F +M E+N SW A+I+ Y + L+ F +MI++
Sbjct: 479 YSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQS 538
Query: 386 GVRPNYITFVSVLSACSHAGLVQEG-WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
G +P+ ++F+SVLSACSH G V+E WH+ N+M + + P EHY MVD+L R G+
Sbjct: 539 GYKPDSVSFLSVLSACSHCGFVEEALWHF-NSMTQIYEVTPKREHYTSMVDVLCRNGRFD 597
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP-NNCGYHVLLSNIY 503
EA L+ M + ++W S+L +CRIHKN +L + AA +LF +E + ++ +SNIY
Sbjct: 598 EAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIY 657
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A AG+W++V + + M++R + K P +S VE++ + H F DK HP+ +KI + L+
Sbjct: 658 AVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALS 717
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
++++ GY D T +HDVD+ K +L+ HSE+ A NLR C
Sbjct: 718 KEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACT 777
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH I++IS++V+REI+VRDS RFH+FKDG+CSCGDYW
Sbjct: 778 DCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 223/491 (45%), Gaps = 48/491 (9%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M + S++ ++S K + LF+ V++ V SW +I + S EA R
Sbjct: 69 MPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAV-SWTILIGGYLQSNQSKEAFRL 127
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
++ MR+ + P T + L + Q H G+ ++ V ++L+D Y K
Sbjct: 128 YADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCK 187
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
L A +LF + ++ V++ S++TGY EA+ LF E +
Sbjct: 188 THCLYLASQLFKHMLN--KDTVTFNSLMTGYSNEGLNEEAIELFLEL------------H 233
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+ + A++LSA + + HGFV+K F V VGN L+D Y++ VD
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
K+F M E D +++N +I YA NG E+ D+F ++ + T A LL+I
Sbjct: 294 EVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKL-QFTRFDRRQFPF-ATLLSI 351
Query: 301 AHLGV-LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A + LR+G+ IH Q I + V +++DMY KC A+K F+ + K+ W
Sbjct: 352 ATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPW 411
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQ 408
TAMI+ Y + E +++F M + GV + TF S+L AC+ H+ L++
Sbjct: 412 TAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIR 471
Query: 409 EGWHWLNTMGHEFNIEPGVEHY---GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
G+ M + ++ ++ Y GCM D + G++ E + V W +L
Sbjct: 472 SGF-----MSNVYSGSALLDTYAKCGCMTDAIKSFGEMPE-----------RNSVSWNAL 515
Query: 466 LGACRIHKNVD 476
+ A + NVD
Sbjct: 516 ISAYAQNGNVD 526
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 30/217 (13%)
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
++K GF+ N ++ + G + + +VFD M K+ ++ N +I+ + + G ++A
Sbjct: 34 IVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKA 93
Query: 274 LDVFDQMVKSTDV------------------------------KCNAVTLSAVLLAIAHL 303
++FD MV+ T V + + VTL +L L
Sbjct: 94 RELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGEL 153
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
+ IH VIK+ E +++V S++D YCK + LA + F M K+ ++ +++
Sbjct: 154 ETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLM 213
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
GY EA++LF ++ +G++P+ TF ++LSA
Sbjct: 214 TGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/590 (36%), Positives = 341/590 (57%), Gaps = 35/590 (5%)
Query: 74 STFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDE 133
ST+ I +C L + K+ GF D ++ + ++ M+ KCG + DA +LFDE
Sbjct: 133 STYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDE 192
Query: 134 IPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
+P R N VSW ++++GYV + N EA LF E +CG + A+
Sbjct: 193 MPAR--NAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRT------------FAT 238
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
++ A + + + H IK G ++ V LID Y++ G ++ + VFD M +K
Sbjct: 239 MIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKT 298
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V WNSIIA YA +G + EALD++ +M + + VK + T S ++ + L + K +H
Sbjct: 299 IVGWNSIIAGYALHGYSEEALDLYHEM-RDSGVKMDHFTFSIIIRICSRLASVARAKQVH 357
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+++ V+ T+++D Y K G+VD AR F++M +N+ SW A+IAGYG H
Sbjct: 358 ASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGE 417
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
EA+D+F KM++ G+ PN++TF++VLSACS +GL + GW +M + ++P H+ CM
Sbjct: 418 EAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACM 477
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
++LLGR G L EAY LI + +W +LL ACR+H N++LG+ AA+KL+ +EP
Sbjct: 478 IELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKL 537
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
+++L NIY ++G+ ++ +K + L P S +E+ + HAFL GDK H Q E
Sbjct: 538 SNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIE 597
Query: 554 KIYEYLEELNVKLQEVGYVTDMTS-VIHDVDQEEKEMTLRIHSEKLA------------- 599
K+ ++EL + + ++GYV + + ++ DVD+ E+++ + HSEKLA
Sbjct: 598 KVVGKVDELMLNISKLGYVPEEQNFMLPDVDENEEKIRM-YHSEKLAIAYGLLNTLEKTP 656
Query: 600 -----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ R+C DCH+VI+LI+ + REIV+RD+ RFH+F+DG CSCGDYW
Sbjct: 657 LQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/652 (34%), Positives = 352/652 (53%), Gaps = 69/652 (10%)
Query: 43 SVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIF 102
+ IA L G+ EA + F +L++ S F I+SC+ L SGKQ H +
Sbjct: 18 TAIATLCSKGNLREAFQRF----RLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVS 73
Query: 103 GFHRDVFVSSALIDMYSK-------------------------------CGELSDARKLF 131
GF D F+ + L+ MYSK G+L +ARK+F
Sbjct: 74 GFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVF 133
Query: 132 DEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAI 191
DE+P R + +W +M+ G +Q + E L LF+E + D +
Sbjct: 134 DEMPDR--KLTTWNAMIAGLIQFEFNEEGLSLFREM------------HGLGFSPDEYTL 179
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
SV S + + + + HG+ IK G + ++ V ++L Y R G + V M
Sbjct: 180 GSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPV 239
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
++ V WN++I AQNG L ++ +M+K + + N +T VL + + L + G+
Sbjct: 240 RNLVAWNTLIMGNAQNGCPETVLYLY-KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ 298
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
IH + IK+ V V +S+I MY KCG + A KAF++ ++++ W++MI+ YG H +
Sbjct: 299 IHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQ 358
Query: 372 AREALDLFYKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
EA++LF M + + N + F+++L ACSH+GL +G + M ++ +PG++HY
Sbjct: 359 GDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHY 418
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
C+VDLLGRAG L +A +I M +K D V+W +LL AC IHKN ++ + K++ +++P
Sbjct: 419 TCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDP 478
Query: 491 NNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHP 550
N+ +VLL+N++A+A RW DV R M+++ + K G S E +G+VH F +GD+
Sbjct: 479 NDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQS 538
Query: 551 QHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------- 599
+ ++IY YL+EL ++++ GY D SV+HD+D+EEKE L HSEKLA
Sbjct: 539 KSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEG 598
Query: 600 -------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + IS + +REI +RD RFH+F +G CSCGDYW
Sbjct: 599 APIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 180/369 (48%), Gaps = 19/369 (5%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N +F++ D+ + +WN++IA L + + E L F M L +P T
Sbjct: 128 NARKVFDEMPDRK-LTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGS 186
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ L + G+Q H +G D+ V+S+L MY + G+L D + +P +RN+V+
Sbjct: 187 AGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMP--VRNLVA 244
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W +++ G QN L L+K +++ S C + + +VLS+CS + +
Sbjct: 245 WNTLIMGNAQNGCPETVLYLYK--MMKISGCRP----------NKITFVTVLSSCSDLAI 292
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
G + H IK G S V V ++LI Y++ G + + K F ++D V W+S+I+
Sbjct: 293 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 352
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLE 322
Y +G EA+++F+ M + T+++ N V +L A +H G+ G + D ++ K +
Sbjct: 353 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 412
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYK 381
+ T ++D+ + G +D A M K ++ W +++ +H A A +F +
Sbjct: 413 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 472
Query: 382 MIKAGVRPN 390
+++ + PN
Sbjct: 473 ILQ--IDPN 479
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 126/277 (45%), Gaps = 27/277 (9%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N+ +WN++I A+ G L + M+ P + TF + SCS L G+Q H
Sbjct: 241 NLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIH 300
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+A G V V S+LI MYSKCG L DA K F E + + V W+SM++ Y +
Sbjct: 301 AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE--REDEDEVMWSSMISAYGFHGQ 358
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF--- 213
EA+ LF + E++ N+ ++ VA ++L ACS + +G F
Sbjct: 359 GDEAIELFNT-MAEQT----------NMEINEVAFLNLLYACSHSGLK--DKGLELFDMM 405
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAE 272
V K GF + ++D R G +D + + M I+ D V W ++++ + A
Sbjct: 406 VEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEM 465
Query: 273 ALDVFDQMVK--STDVKCNAVTLSAVLLAIAHLGVLR 307
A VF ++++ D C VLLA H R
Sbjct: 466 AQRVFKEILQIDPNDSAC------YVLLANVHASAKR 496
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 239/714 (33%), Positives = 355/714 (49%), Gaps = 112/714 (15%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN I + + + F M+ L +T +++C + L++ KQ H F
Sbjct: 202 WNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVF 261
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
FG DV + + LI MYSK G+L AR++FD + R N SW SM++ Y +A
Sbjct: 262 RFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENR--NTSSWNSMISSYAALGFLNDA 319
Query: 161 LLLFKEF--------------LLEESECGGASENSDNVF---------VDSVAIASVLSA 197
LF E LL G E N+ +S ++ SVL A
Sbjct: 320 WSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQA 379
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-------- 249
S + + + HG+V++ GFD +V VG +LID Y + + ++ VFD M
Sbjct: 380 ISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAW 439
Query: 250 ---------------------------IEKDAVTWNSIIAIYAQNGLAAEALDVFDQ--- 279
I+ D VTWN +I+ YA G EAL V Q
Sbjct: 440 NSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKS 499
Query: 280 -------------------------------MVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
++ V N+ +++ +L A A L +L+
Sbjct: 500 LGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQK 559
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK IH I+ E V V T++IDMY K + A K F +++ K + SW MI G+ +
Sbjct: 560 GKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAI 619
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
+EA+ +F +M K GV P+ ITF ++LSAC ++GL+ EGW + ++M ++ I P +E
Sbjct: 620 FGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLE 679
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HY CMVDLLGRAG L EA+DLI M +K D +WG+LLG+CRIHKN+ E AAK LF+L
Sbjct: 680 HYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKL 739
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
EPNN ++L+ N+Y+ RWED++ R LM + +S +++ +VH F +K
Sbjct: 740 EPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKP 799
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
HP KIY L +L +++++GYV D+ V ++D+ EK+ L H+EKLA
Sbjct: 800 HPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMK 859
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
N R+C DCH+ + IS V RE+ +RD RFH+F++G CSC D+W
Sbjct: 860 AGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 214/457 (46%), Gaps = 58/457 (12%)
Query: 37 NVFSWNSVIADLARGGDSVE-ALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
N WNS + + S+ L F + + + A+K+C+ + D+ G +
Sbjct: 96 NYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEI 155
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H GF DV++ AL++ Y +C L A ++F E+P + W + +Q++
Sbjct: 156 HGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPN--PEALLWNEAIILNLQSE 213
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
++ + LF++ + ++ I VL AC ++ + HG+V
Sbjct: 214 KLQKGVELFRKMQFSFLK------------AETATIVRVLQACGKMGALNAAKQIHGYVF 261
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+ G DS+V + N LI Y++ G ++++R+VFD M ++ +WNS+I+ YA G +A
Sbjct: 262 RFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWS 321
Query: 276 VFDQMVKSTDVKCNAVT-----------------------------------LSAVLLAI 300
+F ++ +S+D+K + VT +++VL AI
Sbjct: 322 LFYEL-ESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAI 380
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
+ LG L +GK H V++ + V VGTS+IDMY K + A+ F+ MK +N+ +W
Sbjct: 381 SELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWN 440
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG---WHWLNTM 417
++++GY +AL L +M K G++P+ +T+ ++S + G +E H ++
Sbjct: 441 SLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSL 500
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
G + P V + ++ +AG +++ M+
Sbjct: 501 G----LTPNVVSWTALISGSSQAGNNRDSLKFFAQMQ 533
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 18/289 (6%)
Query: 114 LIDMYSKCGELSDARKLFD-EIPQRIRNIVSWTSMLTGYVQNDNAREALL-LFKEFLLEE 171
LI Y G+ A +F +P RN + W S + + + + +L +FKE
Sbjct: 72 LISSYLGFGDFWSAAMVFYVGLP---RNYLKWNSFVEEFKSSAGSLHIVLEVFKEL---- 124
Query: 172 SECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLID 231
+ V DS + L C+RV + HG +IKRGFD +V + L++
Sbjct: 125 --------HGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMN 176
Query: 232 AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
Y R ++ + +VF M +A+ WN I + Q+ + +++F +M + + +K
Sbjct: 177 FYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM-QFSFLKAETA 235
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
T+ VL A +G L K IH V + L+ V + +I MY K G+++LAR+ F+ M
Sbjct: 236 TIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSM 295
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+ +N SW +MI+ Y +A LFY++ + ++P+ +T+ +LS
Sbjct: 296 ENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSG 344
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/453 (42%), Positives = 290/453 (64%), Gaps = 19/453 (4%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H V+K GF S + V N LI++Y G + S K+FD M +D ++W+S+I+ +A+ GL
Sbjct: 116 HTLVLKLGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLP 175
Query: 271 AEALDVFDQM-VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EAL +F QM +K +D+ + V + +V+ A++ LG L LG +H + ++ + +V +G+
Sbjct: 176 DEALTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGS 235
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
++IDMY +CG +D + K F++M +NV +WTA+I G +H R REAL+ FY M+++G++P
Sbjct: 236 ALIDMYSRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKP 295
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+ I F+ VL ACSH GLV+EG ++M E+ IEP +EHYGCMVDLLGRAG + EA+D
Sbjct: 296 DRIAFMGVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDF 355
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
+EGM+V+ + V+W +LLGAC H + L E A +++ EL+P++ G +VLLSN Y G W
Sbjct: 356 VEGMRVRPNSVIWRTLLGACVNHNLLVLAEKAKERIKELDPHHDGDYVLLSNAYGGVGNW 415
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
E R+ M+ ++ K PG SLV + H F+ GD HPQ E+I +L + ++
Sbjct: 416 VKKEGVRNSMRESKIVKEPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSVIDTVKLG 475
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GY +V+HD+ +EEKE +L HSEKLA NLR+C DCH+ +
Sbjct: 476 GYTPSTKNVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKTIRVIKNLRICYDCHSFM 535
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +S DR+IV+RD RFH+F+ G CSC D+W
Sbjct: 536 KHVSGFFDRDIVIRDRSRFHHFRKGSCSCRDFW 568
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 172/329 (52%), Gaps = 23/329 (6%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
++ + F +N+VI +A S+ AL FS M + ++ TFP +KS
Sbjct: 57 RFPIPGDPFPYNAVIRHVALHAPSL-ALALFSHMHRTNVPFDHFTFPLILKSSKL----- 110
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+ H GFH +++V +ALI+ Y G L + KLFDE+P+R +++SW+S+++
Sbjct: 111 NPHCIHTLVLKLGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRR--DLISWSSLISC 168
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
+ + EAL LF++ L+ES+ + D V + SV+SA S + +
Sbjct: 169 FAKRGLPDEALTLFQQMQLKESD----------ILPDGVVMLSVISAVSSLGALELGIWV 218
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H F+ + G + V +G+ LID Y+R G +D S KVFD M ++ VTW ++I A +G
Sbjct: 219 HAFISRIGVNLTVSLGSALIDMYSRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRG 278
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESVIVGT 329
EAL+ F MV+S +K + + VL+A +H G++ G+ + + + +E ++
Sbjct: 279 REALEAFYDMVES-GLKPDRIAFMGVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYG 337
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
++D+ + G V +AF+ ++ VR
Sbjct: 338 CMVDLLGRAGMV---LEAFDFVEGMRVRP 363
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 158/339 (46%), Gaps = 39/339 (11%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTT---LFNKYVDKNNVFSWNSVIADLARGGDSVEA 57
+KL S++ + ++ + T+ +L LF++ + + ++ SW+S+I+ A+ G EA
Sbjct: 120 LKLGFHSNIYVQNALINSYGTSGSLHASLKLFDE-MPRRDLISWSSLISCFAKRGLPDEA 178
Query: 58 LRAFSSM--RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALI 115
L F M ++ + P I + S+L L G H G + V + SALI
Sbjct: 179 LTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALI 238
Query: 116 DMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG 175
DMYS+CG++ + K+FDE+P RN+V+WT+++ G + REAL F + + E G
Sbjct: 239 DMYSRCGDIDRSVKVFDEMPH--RNVVTWTALINGLAVHGRGREALEAFYDMV----ESG 292
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTL------ 229
+ D +A VL ACS + V EG F SE G+ L
Sbjct: 293 --------LKPDRIAFMGVLVACSHGGL--VEEGRRVF---SSMWSEYGIEPALEHYGCM 339
Query: 230 IDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
+D R G V + +GM + ++V W +++ + L A + + +K D
Sbjct: 340 VDLLGRAGMVLEAFDFVEGMRVRPNSVIWRTLLGACVNHNLLVLA-EKAKERIKELDPHH 398
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
+ VLL+ A+ GV G + + ++ + ES IV
Sbjct: 399 DG---DYVLLSNAYGGV---GNWVKKEGVRNSMRESKIV 431
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 109/225 (48%), Gaps = 11/225 (4%)
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
I D +N++I A + + AL +F M + T+V + T +L + + L
Sbjct: 60 IPGDPFPYNAVIRHVALHA-PSLALALFSHMHR-TNVPFDHFTFPLILKS-SKLN----P 112
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
CIH V+K+ ++ V ++I+ Y G + + K F++M +++ SW+++I+ +
Sbjct: 113 HCIHTLVLKLGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKR 172
Query: 370 CRAREALDLFYKMI--KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
EAL LF +M ++ + P+ + +SV+SA S G ++ G W++ + V
Sbjct: 173 GLPDEALTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGI-WVHAFISRIGVNLTV 231
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++D+ R G + + + + M + + V W +L+ +H
Sbjct: 232 SLGSALIDMYSRCGDIDRSVKVFDEMPHR-NVVTWTALINGLAVH 275
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/536 (41%), Positives = 303/536 (56%), Gaps = 66/536 (12%)
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
A+++F + ++ W S L + D+ +A++LF +V
Sbjct: 112 AQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRL------------RQYDVCP 159
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVF 246
D+ +SVL AC + HG V K GF S
Sbjct: 160 DTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRS------------------------- 194
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
W S+IA Y Q G A EA+ +F +M + VKCN VT+ AVL A A LG L
Sbjct: 195 ----------WTSMIAGYVQCGKAKEAIHLFAKM-EEAGVKCNEVTVVAVLAACADLGAL 243
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
LG IH+ + + +V + ++IDMY KCG ++ A K F +M+E+ V SW+AMI G
Sbjct: 244 DLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGL 303
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
MH RA EAL LF M + G+ PN +TF+ +L ACSH GL+ EG + +M ++ I P
Sbjct: 304 AMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQ 363
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
+EHYGCMVDLL RAG L EA++ I M +K + VVWG+LLGACR+HKNV++ E A K L
Sbjct: 364 IEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLL 423
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
EL+P N GY+V+LSNIYA AGRWED R R MK+R++ KTPG+S + + G VH F+ G+
Sbjct: 424 ELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGE 483
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
+ HP E+I++ EEL +++ GYV + + V+ D+++ EK + HSEKLA
Sbjct: 484 ESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMN 543
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH+ +LIS +V+REIVVRD RFH F D CSC DYW
Sbjct: 544 TPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
K F WNS + LA G ++A+ F +R+ + P T +++C L DL +G+
Sbjct: 122 QKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGR 181
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H GF SWTSM+ GYVQ
Sbjct: 182 ILHGVVEKVGFR-------------------------------------SWTSMIAGYVQ 204
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
A+EA+ LF + +EE+ V + V + +VL+AC+ + + H +
Sbjct: 205 CGKAKEAIHLFAK--MEEA----------GVKCNEVTVVAVLAACADLGALDLGMRIHEY 252
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+ GF V + NTLID Y + G ++ + KVF+ M E+ V+W+++I A +G A EA
Sbjct: 253 SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEA 312
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
L +F M ++ N VT +L A +H+G++ G+
Sbjct: 313 LRLFSDM-SQVGIEPNGVTFIGLLHACSHMGLISEGR 348
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 124/249 (49%), Gaps = 23/249 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V+K SW S+IA + G + EA+ F+ M + + T + +C+ L L G
Sbjct: 187 VEKVGFRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLG 246
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H+ + GF R+V +S+ LIDMY KCG L +A K+F+E+ + R +VSW++M+ G
Sbjct: 247 MRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEE--RTVVSWSAMIGGLA 304
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+ A EAL LF + S+ G + + V +L ACS + + ++EG
Sbjct: 305 MHGRAEEALRLFSDM----SQVG--------IEPNGVTFIGLLHACSHMGL--ISEGRRF 350
Query: 213 FV-IKR--GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA---IYA 265
F + R G ++ ++D +R G + + + M ++ + V W +++ ++
Sbjct: 351 FASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHK 410
Query: 266 QNGLAAEAL 274
+A EA+
Sbjct: 411 NVEMAEEAI 419
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/648 (34%), Positives = 353/648 (54%), Gaps = 48/648 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ +KN V +W ++I V AL F M KL P+ T + +C A H
Sbjct: 135 LFDEMPEKN-VVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASH 193
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ GKQ H +G + ++L +Y+K G L + F IP + N+++WT+M
Sbjct: 194 NIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDK--NVITWTTM 251
Query: 148 LTGYVQNDNARE-ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ +++N E L LF + L E V + + SV+S C +
Sbjct: 252 ISACAEDENYTELGLNLFLDMLKGE------------VMPNEFTLTSVMSLCGTSLDMNL 299
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ GF K G + + V N+ + Y R G + + ++F+ M + +TWN++I+ +AQ
Sbjct: 300 GKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQ 359
Query: 267 NGLAA-----------EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+A +AL +F +V+S +K + T S++L + + L G+ IH Q
Sbjct: 360 IMDSAKDDLHARSRGFQALKIFRDLVRSA-MKPDLFTFSSILSVCSTMMALEQGEQIHAQ 418
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
IK V+V +++++MY KCG ++ A KAF +M + + +WT+MI+GY H R +A
Sbjct: 419 TIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDA 478
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
+ LF MI AG +PN ITFVS+LSACS+AGLV+E + + M +E++IEP ++HYGCM+D
Sbjct: 479 IQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMID 538
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY 495
+ R G+L +AY I+ + + +W SL+ CR H N++L AA +L EL+P
Sbjct: 539 MFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVET 598
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
+VLL N+Y + GRW DV R R L K+ L S + +R KV+ F D+ HPQ ++
Sbjct: 599 YVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTEL 658
Query: 556 YEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEM--TLRIHSEKLA-------------- 599
Y+ LE L K + +GY + ++D +++ K +L+ HSE+LA
Sbjct: 659 YQLLETLLEKAKAIGYEPYQNTELYDSEEDGKPAAGSLKHHSERLAVALGLLKAPPGVTV 718
Query: 600 ----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
N+ +C DCH+ I+ S + +REIVVRDSKR H FKDG CSCGD+
Sbjct: 719 RITKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 134/515 (26%), Positives = 238/515 (46%), Gaps = 55/515 (10%)
Query: 30 NKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDL 89
N Y V N + R D+ EA+ +M K + + + + C L
Sbjct: 40 NSYQGSTQVLE-NGRLEAPPRPLDAQEAM----AMLKEGQSVQSAMYVPLLHRCIETGSL 94
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
K H G D+FV+++L+++Y +CG DAR LFDE+P+ +N+V+WT+++T
Sbjct: 95 GGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPE--KNVVTWTALIT 152
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
GY N AL +F E L + + +LSAC + +
Sbjct: 153 GYTLNSQPVLALEVFVEML------------KLGRYPSDYTLGGMLSACVASHNIDLGKQ 200
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG+ IK G S +GN+L Y + G+++ + F + +K+ +TW ++I+ A++
Sbjct: 201 VHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDEN 260
Query: 270 AAE-ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
E L++F M+K +V N TL++V+ + LGK + K+ ++ V
Sbjct: 261 YTELGLNLFLDMLKG-EVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVK 319
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG---------MHCRAR--EALD 377
S + +Y + G+ + A + F +M++ +V +W AMI+G+ +H R+R +AL
Sbjct: 320 NSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALK 379
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCM 433
+F ++++ ++P+ TF S+LS CS +++G H I+ G V +
Sbjct: 380 IFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQI-----HAQTIKTGFLSDVVVNSAL 434
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC----RIHKNVDLGE---IAAKKLF 486
V++ + G ++ A M + V W S++ R H + L E +A K
Sbjct: 435 VNMYNKCGCIEYATKAFVEMPTRT-LVTWTSMISGYSQHGRPHDAIQLFEDMILAGAK-- 491
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKN 521
PN + LLS + AG E+ R +M+N
Sbjct: 492 ---PNEITFVSLLSAC-SYAGLVEEAMRYFDMMQN 522
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/573 (37%), Positives = 327/573 (57%), Gaps = 19/573 (3%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKN----NVFSWNSVIADLARGGDSVEALRAFSSM 64
VSS++ K + N +FN +DK+ N WN +I+ G +AL F M
Sbjct: 249 VSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKM 308
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
+ P ST CS D+ GKQ H F FG ++ V +AL+DMY KCG++
Sbjct: 309 MVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDM 368
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
K+F + N++ W+++++ Q+ +AL LF EF +E+
Sbjct: 369 GTGLKIFRR--SQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDG------------ 414
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
DS + +VL ACS +T+ HG K GF S+V VG+ L+D YA+ + S+K
Sbjct: 415 LADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKK 474
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VF + +KD V+WN++I+ YAQ+ A EAL F M + +++ N VT++ +L AHL
Sbjct: 475 VFLRLSQKDLVSWNALISGYAQDECADEALKAFRDM-QLEEIRPNTVTIACILSVCAHLS 533
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
V+ L K +H +I+ L +V+V S+I Y KCG ++ + F +M E+N SW ++I
Sbjct: 534 VMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIIL 593
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
G GMH R E + LF KM+ +G++P+++TF ++LSACSHAG V EG + +M +FN++
Sbjct: 594 GMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLK 653
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
P +E Y CMVDLLGRAG L +AYDLI M D +WGSLLG+C+ H + L EI A
Sbjct: 654 PQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANH 713
Query: 485 LFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLV 544
+F+L P++ GY VLL+N+Y N G+ + + RS +K+ L K PG S +E+ H F+
Sbjct: 714 IFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHIFIA 773
Query: 545 GDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTS 577
GD+ H Q ++IY +E L +++ GY+ + S
Sbjct: 774 GDRSHSQSDEIYAAVESLTTEIKRAGYIPQIYS 806
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 244/516 (47%), Gaps = 31/516 (6%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L S V+S+++ K + +F K + + ++ SWN++I+ + D +L F
Sbjct: 141 LDDVSVVNSLLTMYWKCGVVEDAVQMFEK-MPEVDLVSWNTMISGFQKSMDYTRSLMFFR 199
Query: 63 SMR-KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
SM + + P R +I SCS+L L G++ H G + ++ S+LI+MY KC
Sbjct: 200 SMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKC 259
Query: 122 GELSDARKLFDEIPQR---IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
G + +A +F+ I + RN V W M++GYV N +ALLLF + ++
Sbjct: 260 GSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVW-------- 311
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
+ D + S+ S CS + HG + K G + + V L+D Y + G
Sbjct: 312 ----GIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGD 367
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
+ K+F + + W+++I+ AQ+G +AL++F + K D ++ L AVL
Sbjct: 368 MGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEF-KMEDGLADSGILVAVLR 426
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
A + L + G IH KM V VG++++D+Y KC + ++K F ++ +K++ S
Sbjct: 427 ACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVS 486
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
W A+I+GY A EAL F M +RPN +T +LS C+H ++ L
Sbjct: 487 WNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMT-----LCKEV 541
Query: 419 HEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
H + I G+ ++ + G + + E M + D V W S++ +H
Sbjct: 542 HGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERND-VSWNSIILGMGMHSR 600
Query: 475 VDLGEIAAKKLFE--LEPNNCGYHVLLSNIYANAGR 508
D + K+ ++P++ + +LS ++AGR
Sbjct: 601 TDEMIVLFDKMVASGIKPDHVTFTAILSAC-SHAGR 635
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 218/437 (49%), Gaps = 33/437 (7%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
FPC IK+ L D++ G+Q H G DV V ++L+ MY KCG + DA ++F+++P
Sbjct: 112 FPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMP 171
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+ ++VSW +M++G+ ++ + +L+ F+ + E ++ + VA S +
Sbjct: 172 E--VDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEF-----------GIYPNRVACVSSI 218
Query: 196 SACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+CS ++ +T G HG V+K G D E + ++LI+ Y + G + + +F+ +++KD
Sbjct: 219 LSCS--SLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKD 276
Query: 254 -----AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
AV WN +I+ Y NG ++AL +F +M+ +K + T+ ++ + +
Sbjct: 277 SVRRNAVIWNVMISGYVSNGCFSQALLLFIKMM-VWGIKPDYSTMVSLFSLCSESLDIAF 335
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK IH + K L+ ++ V T+++DMY KCG + K F + + N+ W+A+I+
Sbjct: 336 GKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQ 395
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW--HWLNT-MGHEFNIEP 425
+AL+LFY+ + V+VL ACS L EG H L T MG ++
Sbjct: 396 SGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFV 455
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD--LGEIAAK 483
G +VDL + + + + + K D V W +L+ + D L
Sbjct: 456 G----SALVDLYAKCRDMGYSKKVFLRLSQK-DLVSWNALISGYAQDECADEALKAFRDM 510
Query: 484 KLFELEPNNCGYHVLLS 500
+L E+ PN +LS
Sbjct: 511 QLEEIRPNTVTIACILS 527
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/574 (38%), Positives = 331/574 (57%), Gaps = 45/574 (7%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS---TFPCAIKSCSALHDLHSGKQAH 96
SW I A G + A+ F MR S+ P S + P A+KSC+ L H
Sbjct: 331 SWAYQIRMAASQGQFLHAISLFLQMRA-SVAPRSSVPASLPAALKSCAGLGLCTLAASLH 389
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKC---------------GELSDA-----RKLFDEIPQ 136
A G D F ++AL+++ K G L A RK+FDE+ +
Sbjct: 390 ALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLE 449
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL- 195
R + VSW +++ G ++ +EAL + +E D D+ +++VL
Sbjct: 450 R--DAVSWNTLILGCAEHKRHQEALSMVREMW------------RDGFMPDTFTLSTVLP 495
Query: 196 --SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
+ C+ + V HG+ IK GFD++V VG++LID YA +D S KVFD + D
Sbjct: 496 IFAECADIKRGMVV---HGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCD 552
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
AV WNS++A YAQNG EAL +F +M+++ V+ VT S+++ A +L +LRLGK +H
Sbjct: 553 AVLWNSMLAGYAQNGSVEEALGIFRRMLQA-GVRPVPVTFSSLIPAFGNLSLLRLGKQLH 611
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAR 373
+I+ +++ + +S+IDMYCKCG VD+AR+ FN ++ ++ SWTAMI GY +H
Sbjct: 612 AYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTT 671
Query: 374 EALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCM 433
EA LF +M V+PN+ITF++VL+ACSHAGLV GW + N+M +++ P +EH +
Sbjct: 672 EAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAAL 731
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNC 493
D LGRAG L EAY+ I MK+K VW +LL ACR+HKN L E AKK+FELEP +
Sbjct: 732 ADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSM 791
Query: 494 GYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHE 553
G HV+LSN+Y+ +GRW + + R M+ + + K P S +E++ K+H F+ DK HP ++
Sbjct: 792 GSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYD 851
Query: 554 KIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEK 587
+I + L + ++ GYV +M V+ D+++E+K
Sbjct: 852 RIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQK 885
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 173/348 (49%), Gaps = 18/348 (5%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
++ +F++ ++++ V SWN++I A EAL M + P T +
Sbjct: 439 SMRKVFDEMLERDAV-SWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIF 497
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ D+ G H A GF DVFV S+LIDMY+ C ++ + K+FD + V
Sbjct: 498 AECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSD--CDAVL 555
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W SML GY QN + EAL +F+ L V V +S++ A +++
Sbjct: 556 WNSMLAGYAQNGSVEEALGIFRRML------------QAGVRPVPVTFSSLIPAFGNLSL 603
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ + H ++I+ F+ + + ++LID Y + G+VD++R+VF+G+ D V+W ++I
Sbjct: 604 LRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMG 663
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLE 322
YA +G EA +F++M + +VK N +T AVL A +H G++ G K + +
Sbjct: 664 YALHGPTTEAFVLFERM-ELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFV 722
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
S+ ++ D + G +D A ++MK K S W+ ++ +H
Sbjct: 723 PSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVH 770
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/437 (45%), Positives = 274/437 (62%), Gaps = 20/437 (4%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
NTLI A+AR G V +R +FD M E++AV+W++++ Y Q G EAL VF QM ++ V
Sbjct: 163 NTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQM-QAQGV 221
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+ + L VL A A LG L GK +H + ++ +V +GT+++DMY KCG+V L +
Sbjct: 222 RPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGME 281
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F MK+KNV +WT MI G MH R ++L LF +M +GV+P+ I F+ L AC+H GL
Sbjct: 282 VFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGL 341
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V +G N+M + + I+P +EHYGCMVDLL R G L EA D++E M +K D ++WG+L+
Sbjct: 342 VDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALM 401
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
CR HKNV+L E K ELEP+ G +VLL NIY+ +GR R+LM+ + + K
Sbjct: 402 AGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEK 461
Query: 527 TPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ-EVGYVTDMTSVIHDVDQE 585
TPG S VE++G +H F+VGD HP+ + I E++ +++ E GYV D V+ D+++E
Sbjct: 462 TPGCSNVEIKGVIHQFIVGDLSHPRIKDILTKWYEIDSRIRLEEGYVPDKKEVLLDIEEE 521
Query: 586 EKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDS 627
E E L HSEKLA NLRVC DCH V +LISKV REI+VRD
Sbjct: 522 EMESALSRHSEKLAIAFALISTEDYMPIRIVKNLRVCQDCHHVTKLISKVYGREIIVRDR 581
Query: 628 KRFHYFKDGLCSCGDYW 644
RFH FKDG CSC DYW
Sbjct: 582 TRFHLFKDGTCSCKDYW 598
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 176/381 (46%), Gaps = 57/381 (14%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ----AHQ 97
+++I A G AL ++ + + L PT T P +KS + + ++ H
Sbjct: 57 DALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHA 116
Query: 98 QAFIFGFHRDVFVSSALIDMYS--------------------------------KCGELS 125
A G + V++ALI +++ + G ++
Sbjct: 117 HAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVA 176
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
DAR LFDE+P+R N VSW++M+ GYVQ + REAL +F + + V
Sbjct: 177 DARSLFDEMPER--NAVSWSAMVNGYVQAGDGREALGVFSQM------------QAQGVR 222
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
D + VL+AC+++ + HG++ V +G L+D YA+ G V + +V
Sbjct: 223 PDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEV 282
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F+GM +K+ + W ++I A +G +++L +F QM +S+ VK + + L A H G+
Sbjct: 283 FEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQM-ESSGVKPDDIAFIGALCACTHTGL 341
Query: 306 LRLGKCIHDQVI-KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMI 363
+ G+ + + ++ ++ + ++D+ + G + AR +M K + W A++
Sbjct: 342 VDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALM 401
Query: 364 AGYGMHCRAREALDLFYKMIK 384
AG CR + ++L +IK
Sbjct: 402 AG----CRFHKNVELAEYVIK 418
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 160/359 (44%), Gaps = 66/359 (18%)
Query: 6 SSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR 65
+S+ +++++ + + +LF++ ++N V SW++++ + GD EAL FS M+
Sbjct: 159 ASTFNTLITAHARAGRVADARSLFDEMPERNAV-SWSAMVNGYVQAGDGREALGVFSQMQ 217
Query: 66 KLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
+ P + + +C+ L L GK H VF+ +AL+DMY+KCGE+
Sbjct: 218 AQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQ 277
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
++F+ + + +N+++WT+M+ G + ++L LF + S V
Sbjct: 278 LGMEVFEGM--KDKNVLAWTTMIKGLAMHGRGSDSLTLFSQM------------ESSGVK 323
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
D +A L AC+ G VD R++
Sbjct: 324 PDDIAFIGALCACTHT-----------------------------------GLVDKGREL 348
Query: 246 FDGMIEKDAVT-----WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
F+ M+ + + ++ + A+NGL +EA D MV+ +K +A+ A++
Sbjct: 349 FNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARD----MVEKMPMKPDALIWGALMAGC 404
Query: 301 AHLGVLRLGKCIHDQVIKMDLEES---VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
+ L + + I+++ ++S V++G ++Y G+ AR+ N M+EK V
Sbjct: 405 RFHKNVELAEYVIKHWIELEPDKSGAYVLLG----NIYSASGRHASAREIRNLMREKGV 459
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/641 (34%), Positives = 355/641 (55%), Gaps = 50/641 (7%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
++F+W+S+I+ AR G A+ + M + P TF CA+ C+++ L G+
Sbjct: 74 KDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAI 133
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
HQ+ +D + +L++MY KC E+ +ARK+F+ + + RN+ S+T+M++ YVQ
Sbjct: 134 HQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGM--KARNVRSYTAMISAYVQAG 191
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
EAL LF + + ++ A++L A + H +
Sbjct: 192 EHAEALELFSRM-----------SKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
RGFD+ V V N L+ Y + G +RKVFD M ++ ++W S+IA YAQ+G EAL+
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+F +M DV+ + V+ S+ L A A LG L G+ IH +V++ L S + TS++ MY
Sbjct: 301 LFKRM----DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLA-SPQMETSLLSMY 355
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
+CG +D AR+ FN+MK ++ S AMIA + H R ++AL ++ +M + G+ + ITFV
Sbjct: 356 ARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFV 415
Query: 396 SVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKV 455
SVL ACSH LV + + ++ + + P VEHY CMVD+LGR+G+L +A +L+E M
Sbjct: 416 SVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPY 475
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
+ D V W +LL C+ H +++ GE AA+K+FEL P +V LSN+YA A R++D R
Sbjct: 476 QTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRV 535
Query: 516 RSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQH-------EKIYEYLEELNVKLQE 568
R M+ R + S +E+ ++H F G ++ Q E++ L EL +++
Sbjct: 536 RKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQ 595
Query: 569 VGYVTDMTSVIHD----VDQEEKEMTLRIHSEKLA---------------------NLRV 603
GYV D V + +EEK+ +L HSE+LA + RV
Sbjct: 596 AGYVPDTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRV 655
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
C DCH+ I+L+S ++++ I VRD RFH+F+ G CSCGD+W
Sbjct: 656 CSDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 216/414 (52%), Gaps = 32/414 (7%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+ +C+ L L G++ H+ I GF D+ + +AL+ MY+KCG L DA+++F+ + I+
Sbjct: 17 VAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGM--EIK 74
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++ +W+S+++ Y + A++L++ + E E NV V A L C+
Sbjct: 75 DLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVE--------PNV----VTFACALGGCA 122
Query: 200 RVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
+V G+ +G H ++ + + ++L++ Y + + +RKVF+GM ++ ++
Sbjct: 123 --SVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
++I+ Y Q G AEAL++F +M K ++ NA T + +L A+ LG L G+ +H +
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
+ +V+V +++ MY KCG ARK F+ M +NV SWT+MIA Y H +EAL+
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
LF +M V P+ ++F S L+AC+ G + EG + + P +E ++ +
Sbjct: 301 LFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSMY 355
Query: 438 GRAGKLKEAYDLIEGMKVK---------ADFVVWGSLLGACRIHKNVDLGEIAA 482
R G L +A + MK + A F G A RI++ ++ I A
Sbjct: 356 ARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPA 409
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 200/431 (46%), Gaps = 47/431 (10%)
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
+ D + S+++AC+++ H +I GF +++ + L+ YA+ G +D ++
Sbjct: 6 IVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAK 65
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
+VF+GM KD W+SII+ YA+ G A+ ++ +M+ + V+ N VT + L A +
Sbjct: 66 RVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMI-AEGVEPNVVTFACALGGCASV 124
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L G+ IH +++ + + ++ S+++MY KC ++ ARK F MK +NVRS+TAMI
Sbjct: 125 AGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMI 184
Query: 364 AGYGMHCRAREALDLFYKMIKA-GVRPNYITFVSVLSACSHAGLVQEGW---HWLNTMGH 419
+ Y EAL+LF +M K + PN TF ++L A G +++G L + G
Sbjct: 185 SAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGF 244
Query: 420 EFNI---EPGVEHYG------------------------CMVDLLGRAGKLKEAYDLIEG 452
+ N+ V YG M+ + G +EA +L +
Sbjct: 245 DTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKR 304
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M V+ V + S L AC + +D G ++ E + L ++YA G +D
Sbjct: 305 MDVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQMETSLLSMYARCGSLDDA 364
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH---PQHEKIYEYLEELNVKLQEV 569
R + MK R FS +A + +H Q +IY +E+ + +
Sbjct: 365 RRVFNRMKTR-----DAFS-------CNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGI 412
Query: 570 GYVTDMTSVIH 580
+V+ + + H
Sbjct: 413 TFVSVLVACSH 423
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/588 (36%), Positives = 335/588 (56%), Gaps = 34/588 (5%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
T+ + +C L + K+ G D ++ + ++ M+ KCG + DAR+LFDE+
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
P++ NI+SW +++ G V + EA LF + S+ G S ++
Sbjct: 193 PEK--NILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAG------------SRMFVTM 238
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
+ A + + + H +K G +V V LID Y++ G ++ ++ VFD M EK
Sbjct: 239 IRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTT 298
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
V WNSIIA YA +G + EAL ++ +M + + VK + T S ++ A L L K H
Sbjct: 299 VGWNSIIAGYALHGYSEEALSMYYEM-RDSGVKIDNFTFSIIIRICARLASLEHAKQAHA 357
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
+++ ++ T+++D+Y K G+++ A+ F+ M KNV SW A+IAGYG H R E
Sbjct: 358 GLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVE 417
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
A+++F +M+ G+ PN++TF++VLSACS++GL GW +M + I+P HY CM+
Sbjct: 418 AVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMI 477
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCG 494
+LLGR G L EA+ LI+ K +W +LL ACR+HKN +LG+ AA+KL+ + P
Sbjct: 478 ELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLS 537
Query: 495 YHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEK 554
+V+L NIY +GR E+ +K R L P S +E++ + + F+ GDK H Q ++
Sbjct: 538 NYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKE 597
Query: 555 IYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------------- 599
IY+ L+EL +++ + GYV ++ DVD++E E L HSEKLA
Sbjct: 598 IYQKLDELMLEISKHGYVPQDKFLLPDVDEQE-ERVLLYHSEKLAIAFGLINTSDWTPLQ 656
Query: 600 ---NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ R+CGDCH+ I+LI+ V REIVVRD+ RFH+FKDG CSCGDYW
Sbjct: 657 IVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 200/394 (50%), Gaps = 23/394 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ +KN + SWN++I L GD EA R F M + F I++ + L
Sbjct: 188 LFDEMPEKN-ILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLG 246
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ +G+Q H + G DVFV+ ALIDMYSKCG + DA+ +FD++P+ + V W S+
Sbjct: 247 LIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPE--KTTVGWNSI 304
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + + EAL ++ E V +D+ + ++ C+R+
Sbjct: 305 IAGYALHGYSEEALSMYYEM------------RDSGVKIDNFTFSIIIRICARLASLEHA 352
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ AH +++ GF ++ L+D Y++ G ++ ++ VFD M K+ ++WN++IA Y +
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNH 412
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVI 326
G EA+++F++M+ V N VT AVL A ++ G+ G I + + + ++ +
Sbjct: 413 GRGVEAVEMFERMLHEGMVP-NHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAM 471
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL--FYKMIK 384
+I++ + G +D +AF +K+ + M A CR + +L F
Sbjct: 472 HYACMIELLGREGLLD---EAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKL 528
Query: 385 AGVRPNYIT-FVSVLSACSHAGLVQEGWHWLNTM 417
G+ P ++ +V +L+ + +G ++E + T+
Sbjct: 529 YGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTL 562
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 168/379 (44%), Gaps = 66/379 (17%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +K V WNS+IA A G S EAL + MR + TF I+ C+ L
Sbjct: 289 VFDQMPEKTTV-GWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLA 347
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L KQAH GF D+ ++AL+D+YSK G + DA+ +FD +P +N++SW ++
Sbjct: 348 SLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPH--KNVISWNAL 405
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + EA+ +F+ L E + + V +VLSACS +G++
Sbjct: 406 IAGYGNHGRGVEAVEMFERMLHE------------GMVPNHVTFLAVLSACS---YSGLS 450
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ RG++ + ++ +R D I+ A+ + +I + +
Sbjct: 451 D--------RGWE--------IFESMSR-----------DHKIKPRAMHYACMIELLGRE 483
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL EA ++K K +A+L A LGK +++ M E +
Sbjct: 484 GLLDEAF----ALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMG-PEKLSN 538
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVR-----SWT-------AMIAGYGMHCRAREA 375
++++Y + G+++ A +K + +R SW I+G H +++E
Sbjct: 539 YVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEI 598
Query: 376 L----DLFYKMIKAGVRPN 390
+L ++ K G P
Sbjct: 599 YQKLDELMLEISKHGYVPQ 617
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EAL++F+ + + ++ T A++ A L +R K + + +I L+ + +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ M+ KCG + AR+ F++M EKN+ SW +I G EA LF M +
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGS 232
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE---HYGC-MVDLLGRAGKLKEAY 447
FV+++ A + GL+ G H +++ GV C ++D+ + G +++A
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQL-----HSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQ 287
Query: 448 DLIEGMKVKADFVVWGSLLGACRIH 472
+ + M K V W S++ +H
Sbjct: 288 CVFDQMPEKTT-VGWNSIIAGYALH 311
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/450 (45%), Positives = 288/450 (64%), Gaps = 25/450 (5%)
Query: 219 FDSEVGVGNTLIDAYARG-----GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
F +EVGV ++ + G D + +F M +D V+WNS++A YAQ G EA
Sbjct: 139 FCNEVGVDKGVLKVWMHNNKNTFGKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEA 198
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
L +FDQM ++ VK T+ ++L A AHLG L G +H + +E + IVGT+++D
Sbjct: 199 LALFDQM-RAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVD 257
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY KCG++ LA + FN M+ K+V +W +IAG +H +EA LF +M +AGV PN IT
Sbjct: 258 MYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDIT 317
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
FV++LSACSHAG+V EG L+ M + IEP VEHYGC++DLL RAG L+EA +LI M
Sbjct: 318 FVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTM 377
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
++ + G+LLG CRIH N +LGE+ K+L L+P + G ++LLSNIYA A +W+D
Sbjct: 378 PMEPNPCALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDAR 437
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE-VGYV 572
+ R+LMK ++K PG S++EL+G VH F+ GD HP+ KIYE L E++ +L+ +G+
Sbjct: 438 KVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGHS 497
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
D V+ D+++E+KE L +HSEKLA NLRVC DCH V +LI
Sbjct: 498 ADTGDVLLDMEEEDKEHALPVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLI 557
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SKV REI+VRD RFH+F+DG CSC D+W
Sbjct: 558 SKVYGREIIVRDRNRFHHFEDGECSCLDFW 587
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 17/250 (6%)
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G+ DA LF E+P R++VSW SML Y Q EAL LF + +
Sbjct: 162 GKRDDAFGLFSEMP--CRDVVSWNSMLACYAQCGKPNEALALFDQM------------RA 207
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
V + S+LSAC+ + H ++ + VG L+D YA+ G + +
Sbjct: 208 VGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISL 267
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ +VF+ M KD + WN+IIA A +G EA +F +M K V+ N +T A+L A +
Sbjct: 268 ATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLFKEM-KEAGVEPNDITFVAMLSACS 326
Query: 302 HLGVLRLGKCIHD-QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSW 359
H G++ G+ + D +E V +ID+ + G ++ A + M E N +
Sbjct: 327 HAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCAL 386
Query: 360 TAMIAGYGMH 369
A++ G +H
Sbjct: 387 GALLGGCRIH 396
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 142/323 (43%), Gaps = 63/323 (19%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
+V SWNS++A A+ G EAL F MR + + PT +T + +C+ L L G H
Sbjct: 178 DVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLH 237
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+ V +AL+DMY+KCG++S A ++F+ + +++++W +++ G + +
Sbjct: 238 TYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMES--KDVLAWNTIIAGMAIHGH 295
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+EA LFKE E G E +D FV ++LSACS
Sbjct: 296 VKEAQRLFKEM----KEAG--VEPNDITFV------AMLSACS----------------- 326
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-----IEKDAVTWNSIIAIYAQNGLAA 271
G VD +K+ D M IE + +I + A+ GL
Sbjct: 327 ------------------HAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLE 368
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA+++ M ++ N L A+L G LG+ + ++I + S G I
Sbjct: 369 EAMELIGTM----PMEPNPCALGALLGGCRIHGNFELGEMVGKRLINLQPCHS---GRYI 421
Query: 332 I--DMYCKCGQVDLARKAFNQMK 352
+ ++Y + D ARK N MK
Sbjct: 422 LLSNIYAAAKKWDDARKVRNLMK 444
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
T +FN ++ +V +WN++IA +A G EA R F M++ + P TF + +CS
Sbjct: 269 TQVFNA-MESKDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITFVAMLSACS- 326
Query: 86 LHDLHSGKQAHQQAFI------FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
H+G Q + +G V +ID+ ++ G L +A +L +P
Sbjct: 327 ----HAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPME-P 381
Query: 140 NIVSWTSMLTG 150
N + ++L G
Sbjct: 382 NPCALGALLGG 392
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/639 (34%), Positives = 355/639 (55%), Gaps = 37/639 (5%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
+ LF ++K+ V ++NS++ + G + EA+ F + + P+ TF + +
Sbjct: 195 SQLFKHMLNKDTV-TFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVG 253
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
L D G+Q H F +VFV +AL+D YSK ++ + KLF E+P+ + +S+
Sbjct: 254 LDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPEL--DGISYN 311
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
++T Y N +E+ LF++ + A++LS +
Sbjct: 312 VVITSYAWNGQFKESFDLFRKLQFTRFD------------RRQFPFATLLSIATSSLNLR 359
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H I G + E V N L+D YA+ ++K+FD + K V W ++I+ Y
Sbjct: 360 MGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYV 419
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
Q G E ++VF M + T V + T +++L A A+L + LG+ +H +I+ +V
Sbjct: 420 QKGKHEEGINVFSDM-RRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNV 478
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
G++++D Y KCG + A K+F +M E+N SW A+I+ Y + L+ F +MI++
Sbjct: 479 YSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQS 538
Query: 386 GVRPNYITFVSVLSACSHAGLVQEG-WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
G +P+ ++F+SVLSACSH G V+E WH+ N+M + + P EHY MVD+L R G+
Sbjct: 539 GYKPDSVSFLSVLSACSHCGFVEEALWHF-NSMTQIYEVTPKREHYTSMVDVLCRNGRFD 597
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP-NNCGYHVLLSNIY 503
EA L+ M + ++W S+L +CRIHKN +L + AA +LF +E + ++ +SNIY
Sbjct: 598 EAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIY 657
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A AG+W++V + + M++R + K P +S VE++ + H F DK HP+ +KI + L+
Sbjct: 658 AVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALS 717
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
++++ GY D T +HDVD+ K +L+ HSE+ A NLR C
Sbjct: 718 KEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACT 777
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH I++IS++V+REI+VRDS RFH+FKDG+CSCGDYW
Sbjct: 778 DCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 223/491 (45%), Gaps = 48/491 (9%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M + S++ ++S K + LF+ V++ V SW +I + S EA R
Sbjct: 69 MPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAV-SWTILIGGYLQSNQSKEAFRL 127
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
++ MR+ + P T + L + Q H G+ ++ V ++L+D Y K
Sbjct: 128 YADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCK 187
Query: 121 CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASEN 180
L A +LF + ++ V++ S++TGY EA+ LF E +
Sbjct: 188 THCLYLASQLFKHMLN--KDTVTFNSLMTGYSNEGLNEEAIELFLEL------------H 233
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+ + A++LSA + + HGFV+K F V VGN L+D Y++ VD
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
K+F M E D +++N +I YA NG E+ D+F ++ + T A LL+I
Sbjct: 294 EVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKL-QFTRFDRRQFPF-ATLLSI 351
Query: 301 AHLGV-LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A + LR+G+ IH Q I + V +++DMY KC A+K F+ + K+ W
Sbjct: 352 ATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPW 411
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQ 408
TAMI+ Y + E +++F M + GV + TF S+L AC+ H+ L++
Sbjct: 412 TAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIR 471
Query: 409 EGWHWLNTMGHEFNIEPGVEHY---GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSL 465
G+ M + ++ ++ Y GCM D + G++ E + V W +L
Sbjct: 472 SGF-----MSNVYSGSALLDTYAKCGCMTDAIKSFGEMPE-----------RNSVSWNAL 515
Query: 466 LGACRIHKNVD 476
+ A + NVD
Sbjct: 516 ISAYAQNGNVD 526
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 30/217 (13%)
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
++K GF+ N ++ + G + + +VFD M K+ ++ N +I+ + + G ++A
Sbjct: 34 IVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKA 93
Query: 274 LDVFDQMVKSTDV------------------------------KCNAVTLSAVLLAIAHL 303
++FD MV+ T V + + VTL +L L
Sbjct: 94 RELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGEL 153
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
+ IH VIK+ E +++V S++D YCK + LA + F M K+ ++ +++
Sbjct: 154 ETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLM 213
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
GY EA++LF ++ +G++P+ TF ++LSA
Sbjct: 214 TGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/588 (36%), Positives = 334/588 (56%), Gaps = 34/588 (5%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
T+ + +C L + K+ G D ++ + ++ M+ KCG + DAR+LFDE+
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
P++ NI+SW +++ G V + EA LF S+ G S ++
Sbjct: 193 PEK--NILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAG------------SRMFVTM 238
Query: 195 LSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA 254
+ A + + + H +K G +V V LID Y++ G ++ ++ VFD M EK
Sbjct: 239 IRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTT 298
Query: 255 VTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHD 314
V WNSIIA YA +G + EAL ++ +M + + VK + T S ++ A L L K H
Sbjct: 299 VGWNSIIAGYALHGYSEEALSMYYEM-RDSGVKIDNFTFSIIIRICARLASLEHAKQAHA 357
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRARE 374
+++ ++ T+++D+Y K G+++ A+ F+ M KNV SW A+IAGYG H R E
Sbjct: 358 GLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVE 417
Query: 375 ALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
A+++F +M+ G+ PN++TF++VLSACS++GL GW +M + I+P HY CM+
Sbjct: 418 AVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMI 477
Query: 435 DLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCG 494
+LLGR G L EA+ LI+ K +W +LL ACR+HKN +LG+ AA+KL+ + P
Sbjct: 478 ELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLS 537
Query: 495 YHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEK 554
+V+L NIY +GR E+ +K R L P S +E++ + + F+ GDK H Q ++
Sbjct: 538 NYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKE 597
Query: 555 IYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------------- 599
IY+ L+EL +++ + GYV ++ DVD++E E L HSEKLA
Sbjct: 598 IYQKLDELMLEISKHGYVPQXKFLLPDVDEQE-ERVLLYHSEKLAIAFGLINTSDWTPLQ 656
Query: 600 ---NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ R+CGDCH+ I+LI+ V REIVVRD+ RFH+FKDG CSCGDYW
Sbjct: 657 IVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 200/394 (50%), Gaps = 23/394 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ +KN + SWN++I L GD EA R F M + F I++ + L
Sbjct: 188 LFDEMPEKN-ILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLG 246
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ +G+Q H + G DVFV+ ALIDMYSKCG + DA+ +FD++P+ + V W S+
Sbjct: 247 LIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPE--KTTVGWNSI 304
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + + EAL ++ E V +D+ + ++ C+R+
Sbjct: 305 IAGYALHGYSEEALSMYYEM------------RDSGVKIDNFTFSIIIRICARLASLEHA 352
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ AH +++ GF ++ L+D Y++ G ++ ++ VFD M K+ ++WN++IA Y +
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNH 412
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVI 326
G EA+++F++M+ V N VT AVL A ++ G+ G I + + + ++ +
Sbjct: 413 GRGVEAVEMFERMLHEGMVP-NHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAM 471
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL--FYKMIK 384
+I++ + G +D +AF +K+ + M A CR + +L F
Sbjct: 472 HYACMIELLGREGLLD---EAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKL 528
Query: 385 AGVRPNYIT-FVSVLSACSHAGLVQEGWHWLNTM 417
G+ P ++ +V +L+ + +G ++E + T+
Sbjct: 529 YGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTL 562
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EAL++F+ + + ++ T A++ A L +R K + + +I L+ + +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ M+ KCG + AR+ F++M EKN+ SW +I G EA LF M +
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGS 232
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE---HYGC-MVDLLGRAGKLKEAY 447
FV+++ A + GL+ G H +++ GV C ++D+ + G +++A
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQL-----HSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQ 287
Query: 448 DLIEGMKVKADFVVWGSLLGACRIH 472
+ + M K V W S++ +H
Sbjct: 288 CVFDQMPEKTT-VGWNSIIAGYALH 311
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/650 (36%), Positives = 362/650 (55%), Gaps = 98/650 (15%)
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALI------DMYSKCGE 123
+P S FP I +C + DL Q H G RD ++ ++ D++ + +
Sbjct: 14 SPASSLFP-QINTCRTIRDL---SQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHR--D 67
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE--ALLLFKEFLLEESECGGASENS 181
L A K+F+++PQR N SW +++ G+ ++D + A+ LF E + +E
Sbjct: 68 LDYAHKIFNQMPQR--NCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEF--------- 116
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF---------------------- 219
+ + SVL AC++ + HG +K GF
Sbjct: 117 --IEPNRFTFPSVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKD 174
Query: 220 -----------------------DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
D EV + N +ID Y R G +R +FD M ++ V+
Sbjct: 175 ACVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVS 234
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH--- 313
WN++I+ Y+QNG +A++VF +M K D++ N VTL +VL A++ LG L LG+ +H
Sbjct: 235 WNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYA 294
Query: 314 -DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
D I++D ++G+++IDMY KCG ++ A F ++ +NV +W+AMI G+ +H +A
Sbjct: 295 EDSGIRID----DVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQA 350
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC 432
+A+D F KM +AGVRP+ + ++++L+ACSHAGLV+EG + + M +EP +EHYGC
Sbjct: 351 GDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGC 410
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNN 492
MVDLLGR G L EA + I M +K D V+W +LLGACR+H+NV++G+ A L ++ P++
Sbjct: 411 MVDLLGRLGLLDEAEEFILNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHD 470
Query: 493 CGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQH 552
G +V LSN+YA+ G W +V R MK + K PG S +++ G +H FLV D HP+
Sbjct: 471 SGAYVALSNMYASQGNWSEVSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRA 530
Query: 553 EKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------- 599
++I L E++ KL+ GY T V+ ++++E+KE L HSEK+A
Sbjct: 531 KEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKP 590
Query: 600 -----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH+ I+LISKV R+I VRD KRFH+F+DG CSC DYW
Sbjct: 591 IRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 640
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 164/348 (47%), Gaps = 65/348 (18%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS----SMRKLSLTPTRSTFPCAIKSC 83
+FN+ + + N FSWN++I + D +AL A + M + P R TFP +K+C
Sbjct: 74 IFNQ-MPQRNCFSWNTIIRGFSE-SDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKAC 131
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD----------------- 126
+ + GKQ H A +GF D FV S L+ MY CG + D
Sbjct: 132 AKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMM 191
Query: 127 ----------------------------ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR 158
AR LFD++ Q R++VSW +M++GY QN +
Sbjct: 192 IDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQ--RSVVSWNTMISGYSQNGFFK 249
Query: 159 EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG 218
+A+ +F+E + +++ + V + SVL A SR+ + E H + G
Sbjct: 250 DAVEVFREM-----------KKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSG 298
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
+ +G+ LID Y++ G ++ + VF+ + ++ +TW+++I +A +G A +A+D F
Sbjct: 299 IRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 358
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
+M + V+ + V +L A +H G++ G+ Q++ +D E I
Sbjct: 359 KM-RQAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRI 405
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/584 (40%), Positives = 337/584 (57%), Gaps = 80/584 (13%)
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND-------NAREALLLFKEFLLEESECG 175
E+ ARK F +I N SW +++ +D N+ EALL F L +
Sbjct: 64 EIKYARKFFSQIHHP--NCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTD----- 116
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE------------- 222
G E + F VL AC+++ + HGFV+K G S+
Sbjct: 117 GLVEPNKFTF------PCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVM 170
Query: 223 -------------------VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
V + N +ID Y R G + SR++FD M K V+WN +I+
Sbjct: 171 CGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISG 230
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
AQNG EA+++F M + DV N VTL +VL A++ LG + LGK +H K ++E
Sbjct: 231 CAQNGHFKEAIEMFHDM-QLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEI 289
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
++G+++IDMY KCG +D A + F ++ +KN +W+A+I G MH RAR+ALD F++M
Sbjct: 290 DDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRM 349
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEG----WHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
+AGV P+ + ++ VLSACSHAGLV+EG +H +N +G + P +EHYGCMVDLLG
Sbjct: 350 QQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVG----LLPRIEHYGCMVDLLG 405
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVL 498
RAG L+EA LI M VK D V+ +LLGAC++H N+++GE AK L P++ G +V
Sbjct: 406 RAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVA 465
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEY 558
LSN++A+ G WE V + R MK + K PG S +EL G +H FLV D HP+ E I+
Sbjct: 466 LSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWIELDGVIHEFLVEDDSHPRAEGIHSM 525
Query: 559 LEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------N 600
LEE++ +L+ VGY + T V+ ++D++EK+ L HSEK+A N
Sbjct: 526 LEEMSDRLRSVGYRPNTTQVLLNMDEKEKQSALHYHSEKIAIAFGLISTRPQTPLQIVKN 585
Query: 601 LRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
LRVC DCH+ I+L+SK+ +R+I+VRD KRFH+F++G CSC DYW
Sbjct: 586 LRVCEDCHSSIKLVSKIYNRKIIVRDRKRFHHFENGSCSCMDYW 629
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 159/332 (47%), Gaps = 56/332 (16%)
Query: 29 FNKYVDKNNVFSWNSVIADLARGG-------DSVEALRAFSSMRKLSLT-PTRSTFPCAI 80
F + N FSWN++I LA +S+EAL FS M L P + TFPC +
Sbjct: 71 FFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVL 130
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA------------- 127
K+C+ L + GKQ H G D FV S L+ +Y CG + DA
Sbjct: 131 KACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNV 190
Query: 128 -------------------RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL 168
R+LFD +P +++VSW M++G QN + +EA+ +F +
Sbjct: 191 VLWNVMIDGYVRMGDLRASRELFDSMPN--KSVVSWNVMISGCAQNGHFKEAIEMFHDMQ 248
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
L +V + V + SVL A SR+ + + H F K + + +G+
Sbjct: 249 L------------GDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSA 296
Query: 229 LIDAYARGGHVDVSRKVFDGMI-EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
LID Y++ G +D + +VF+G+ +K+ +TW++II A +G A +ALD F +M + V
Sbjct: 297 LIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRM-QQAGVT 355
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+ V VL A +H G++ G+ I+ ++ +
Sbjct: 356 PSDVVYIGVLSACSHAGLVEEGRSIYYHMVNI 387
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 20/245 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +K+ V SWN +I+ A+ G EA+ F M+ + P T + + S L
Sbjct: 212 LFDSMPNKS-VVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLG 270
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ GK H A D + SALIDMYSKCG + A ++F+ I + +N ++W+++
Sbjct: 271 AIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNK-KNPITWSAI 329
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G + AR+AL F + G + SD V++ VLSACS + V
Sbjct: 330 IGGLAMHGRARDALDHFWRM-----QQAGVTP-SDVVYI------GVLSACSHAGL--VE 375
Query: 208 EGA---HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAI 263
EG + V G + ++D R G ++ + ++ M ++ D V +++
Sbjct: 376 EGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGA 435
Query: 264 YAQNG 268
+G
Sbjct: 436 CKMHG 440
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
S+++ K + +F +K N +W+++I LA G + +AL F M++ +
Sbjct: 295 SALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGV 354
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAF-IFGFHRDVFVSSALIDMYSKCGELSDAR 128
TP+ + + +CS + G+ + I G + ++D+ + G L +A
Sbjct: 355 TPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAE 414
Query: 129 KLFDEIPQRIRNIV 142
+L +P + +++
Sbjct: 415 QLILNMPVKPDDVI 428
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/597 (36%), Positives = 341/597 (57%), Gaps = 63/597 (10%)
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H Q G +D F+ L+ SKC + A ++F N+ +T+++ G+V +
Sbjct: 69 HAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNP--NVYLYTALIDGFVSSG 126
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
N EA+ L+ L E ++ D+ +AS+L AC H +
Sbjct: 127 NYLEAIQLYSRMLHE------------SILPDNYLMASILKACGSQLALREGREVHSRAL 174
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE------------------------ 251
K GF S V +++ Y + G + +R+VF+ M E
Sbjct: 175 KLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAV 234
Query: 252 ------KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
KD V W ++I + +N AL+ F M + +V+ N T+ VL A + LG
Sbjct: 235 FSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGM-QGENVRPNEFTIVCVLSACSQLGA 293
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L +G+ +H + K ++E ++ VG ++I+MY +CG +D A+ F++MK+++V ++ MI+G
Sbjct: 294 LEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISG 353
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
M+ ++R+A++LF M+ +RP +TFV VL+ACSH GLV G+ ++M ++ +EP
Sbjct: 354 LSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEP 413
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
+EHYGCMVDLLGR G+L+EAYDLI MK+ D ++ G+LL AC++HKN++LGE AK+L
Sbjct: 414 QIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKEL 473
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
+ + G +VLLS++YA++G+W++ + R+ MK + K PG S +E+ ++H FL+G
Sbjct: 474 EDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLG 533
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
D HPQ E+IYE LEELN L+ GY + V+ D++ EKE L +HSE+LA
Sbjct: 534 DLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLI 593
Query: 600 ------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH+ I+LI+K+ R+IVVRD RFHYF++G CSCGDYW
Sbjct: 594 STEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 650
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 169/351 (48%), Gaps = 42/351 (11%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+Y NV+ + ++I G+ +EA++ +S M S+ P +K+C + L
Sbjct: 105 QYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALR 164
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ-------------- 136
G++ H +A GF + V ++++Y KCGEL DAR++F+E+P+
Sbjct: 165 EGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSD 224
Query: 137 --------------RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
R ++ V WT+M+ G+V+N+ AL F+ +
Sbjct: 225 QGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGM------------QGE 272
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
NV + I VLSACS++ + H ++ K + + VGN LI+ Y+R G +D +
Sbjct: 273 NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEA 332
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
+ VFD M ++D +T+N++I+ + NG + +A+++F MV ++ VT VL A +H
Sbjct: 333 QTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMV-GRRLRPTNVTFVGVLNACSH 391
Query: 303 LGVLRLG-KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
G++ G + H +E + ++D+ + G+++ A MK
Sbjct: 392 GGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMK 442
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
IH Q+I+ + + ++ KC +D A + F NV +TA+I G+
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
EA+ L+ +M+ + P+ S+L AC ++EG
Sbjct: 128 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREG 166
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/635 (34%), Positives = 350/635 (55%), Gaps = 81/635 (12%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ ++S++S+I L + +++ FS M L P P K C+ L G
Sbjct: 76 IPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG 135
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR--------------- 137
KQ H + + G D FV ++ MY +CG + DARK+FD + +
Sbjct: 136 KQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARK 195
Query: 138 ------IR------------NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
+R NIVSW +L+G+ ++ +EA+++F++
Sbjct: 196 GCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI------------ 243
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
+ D V ++SVL + + + HG+VIK+G + V + +ID Y + GHV
Sbjct: 244 HHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHV 303
Query: 240 DVSRKVFD--------------------GMIEK---------------DAVTWNSIIAIY 264
+F+ G+++K + V+W SIIA
Sbjct: 304 YGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGC 363
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
AQNG EAL++F +M + VK N VT+ ++L A ++ L G+ H +++ L ++
Sbjct: 364 AQNGKDIEALELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN 422
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V VG+++IDMY KCG+++L++ FN M KN+ W +++ G+ MH +A+E + +F +++
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
++P++I+F S+LSAC GL EGW + M E+ I+P +EHY CMV+LLGRAGKL+
Sbjct: 483 TRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ 542
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
EAYDLI+ M + D VWG+LL +CR+ NVDL EIAA+KLF LEP N G +VLLSNIYA
Sbjct: 543 EAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYA 602
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
G W +V+ R+ M++ L K PG S ++++ +V+ L GDK HPQ ++I E ++E++
Sbjct: 603 AKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISK 662
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
++++ G+ ++ +HDV+++E+E L HSEKLA
Sbjct: 663 EMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLA 697
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 189/452 (41%), Gaps = 93/452 (20%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
QAH + G D ++S+ LI YS +DA + IP I S++S++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPD--PTIYSFSSLIYALTK 93
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+++ +F S + DS + ++ C+ ++ V + H
Sbjct: 94 AKLFTQSIGVFSRMF------------SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCV 141
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
G D + V ++ Y R G + +RKVFD M +KD VT ++++ YA+ G E
Sbjct: 142 SCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEV 201
Query: 274 LDVFDQMVKSTDVKCN-----------------------------------AVTLSAVLL 298
+ + +M +S+ ++ N VT+S+VL
Sbjct: 202 VRILSEM-ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLP 260
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ------------------ 340
++ +L +G+ IH VIK L + V +++IDMY K G
Sbjct: 261 SVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGV 320
Query: 341 -------------VDLARKAFNQMKEK----NVRSWTAMIAGYGMHCRAREALDLFYKMI 383
VD A + F KE+ NV SWT++IAG + + EAL+LF +M
Sbjct: 321 CNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ 380
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEF-NIEPGVEHYGCMVDLLGRA 440
AGV+PN++T S+L AC + + G H H N+ G ++D+ +
Sbjct: 381 VAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVG----SALIDMYAKC 436
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G++ + + M K + V W SL+ +H
Sbjct: 437 GRINLSQIVFNMMPTK-NLVCWNSLMNGFSMH 467
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 115/241 (47%), Gaps = 26/241 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF + + NV SW S+IA A+ G +EAL F M+ + P T P + +C +
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+ H A +V V SALIDMY+KCG ++ ++ +F+ +P +N+V W S+
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT--KNLVCWNSL 460
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + A+E + +F+ + + D ++ S+LSAC +V G+T
Sbjct: 461 MNGFSMHGKAKEVMSIFESLM------------RTRLKPDFISFTSLLSACGQV---GLT 505
Query: 208 EGAHGFVIKRGFDSEVGVGNTL------IDAYARGGHVDVSRKVFDGM-IEKDAVTWNSI 260
+ G+ + E G+ L ++ R G + + + M E D+ W ++
Sbjct: 506 D--EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGAL 563
Query: 261 I 261
+
Sbjct: 564 L 564
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 68/163 (41%), Gaps = 2/163 (1%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
NL+ + + N+ WNS++ + G + E + F S+ + L P +F + +C
Sbjct: 440 NLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC 499
Query: 84 SALHDLHSG-KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
+ G K + +G + S ++++ + G+L +A L E+P + V
Sbjct: 500 GQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCV 559
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
W ++L +N A + ++ E E G N++
Sbjct: 560 -WGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIY 601
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/524 (39%), Positives = 321/524 (61%), Gaps = 16/524 (3%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
+ AI +C L G+Q H + + VF+ + L+ MY +CG L DAR + D +P
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 136 QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVL 195
+R ++VSWT+M++GY Q + EAL LF + L + C + +A+VL
Sbjct: 73 ER--SVVSWTTMISGYSQTERHVEALDLFIKML--RAGC----------IPNEYTLATVL 118
Query: 196 SACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAV 255
++CS + H ++K F+S + VG++L+D YA+ ++ +R+VFD + E+D V
Sbjct: 119 TSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVV 178
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
+ +II+ YAQ GL EALD+F Q+ S ++CN VT + ++ A++ L L GK +H
Sbjct: 179 SCTAIISGYAQKGLDEEALDLFRQLY-SEGMQCNHVTFTTLVTALSGLASLDYGKQVHAL 237
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+++ +L V + S+IDMY KCG++ +R+ F+ M E++V SW AM+ GYG H E
Sbjct: 238 ILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEV 297
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
+ LF + K V+P+ +T ++VLS CSH GLV EG +T+ E + HYGC++D
Sbjct: 298 ISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIID 356
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY 495
LLGR+G+L++A +LIE M ++ +WGSLLGACR+H NV +GE+ A+KL E+EP N G
Sbjct: 357 LLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGN 416
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
+V+LSNIYA AG W+DV + R LM + + K PG S + L +H F ++ HP + I
Sbjct: 417 YVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDI 476
Query: 556 YEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
++E+ V ++ G+V D++ V+HDVD E+KE L HSEKLA
Sbjct: 477 NAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLA 520
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 181/342 (52%), Gaps = 24/342 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +V SW ++I+ ++ VEAL F M + P T + SCS ++ G
Sbjct: 71 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H F +FV S+L+DMY+K + +AR++FD +P+ R++VS T++++GY
Sbjct: 131 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPE--RDVVSCTAIISGYA 188
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q EAL LF++ E +C + V ++++A S + + H
Sbjct: 189 QKGLDEEALDLFRQLYSEGMQC------------NHVTFTTLVTALSGLASLDYGKQVHA 236
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
++++ V + N+LID Y++ G + SR+VFD M+E+ V+WN+++ Y ++GL E
Sbjct: 237 LILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHE 296
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS-- 330
+ +F + K +VK ++VTL AVL +H G++ G I D V+K E+S ++ T
Sbjct: 297 VISLFKDLHK--EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHTGHY 351
Query: 331 --IIDMYCKCGQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
IID+ + G+++ A M ++ S W +++ +H
Sbjct: 352 GCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVH 393
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/654 (35%), Positives = 349/654 (53%), Gaps = 87/654 (13%)
Query: 61 FSSMRKLSLTPTRS-TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
++ R L+ +P SC DL KQ H G +D ++ +I +
Sbjct: 6 YNPNRTLNFSPQPPLILSKPFTSCKTPRDL---KQLHAIFIKTGQIQDPLTAAEVIKFCA 62
Query: 120 -KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR---EALLLFKEFLLEESECG 175
++ AR +F ++P+ N W ++L + ++ EAL+LF L C
Sbjct: 63 FSSRDIDYARAVFRQMPEP--NCFCWNTILRILAETNDEHLQSEALMLFSAML-----CD 115
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF---------------- 219
G + + F SVL AC+R + + HG ++K GF
Sbjct: 116 GRVKPNRFTF------PSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVM 169
Query: 220 -------------------------------DSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
D V + N +ID R G + ++ +FD
Sbjct: 170 CAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDE 229
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M + V+WN +I+ YAQNG EA+++F +M +S+++ N VTL +VL AIA +G L L
Sbjct: 230 MPPRSVVSWNVMISGYAQNGHFIEAINLFQEM-QSSNIDPNYVTLVSVLPAIARIGALEL 288
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK IH K +E ++G++++DMY KCG +D A + F + ++N +W+A+I + M
Sbjct: 289 GKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAM 348
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H RA +A+ F+ M KAGV PN + ++ +LSACSHAGLV+EG + + M ++P +E
Sbjct: 349 HGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIE 408
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HYGCMVDLLGRAG L+EA +LI M ++ D V+W +LLGAC++HKN+ +GE A+ L EL
Sbjct: 409 HYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMEL 468
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
P++ G +V LSN+YA+ G WE V R R MK + K PG S +E+ G +H FLV D
Sbjct: 469 APHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDS 528
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
H + ++I L E+++KL+ GY + V + D++E+ L+ HSEK+A
Sbjct: 529 HSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTA 588
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH ++LIS + R+I+VRD KRFH F+ G CSC DYW
Sbjct: 589 PQHPLKIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 181/392 (46%), Gaps = 68/392 (17%)
Query: 31 KYVDKNNVFSWNSVIADLARGGD---SVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSAL 86
+ + + N F WN+++ LA D EAL FS+M + P R TFP +K+C+
Sbjct: 76 RQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARA 135
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC------------------------- 121
L GKQ H FGFH D FV S L+ MY C
Sbjct: 136 SRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMEL 195
Query: 122 ----------------------GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G++ A+ LFDE+P R++VSW M++GY QN + E
Sbjct: 196 DKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPP--RSVVSWNVMISGYAQNGHFIE 253
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+ LF+E S N+ + V + SVL A +R+ + + H + K
Sbjct: 254 AINLFQEM------------QSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKV 301
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+ + +G+ L+D Y++ G +D + +VF+ + +++A+TW++II +A +G A +A+ F
Sbjct: 302 EIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHL 361
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKC 338
M K+ V N V +L A +H G++ G+ ++K + L+ + ++D+ +
Sbjct: 362 MGKA-GVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRA 420
Query: 339 GQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
G ++ A + M E + W A++ MH
Sbjct: 421 GHLEEAEELIRNMPIEPDDVIWKALLGACKMH 452
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/436 (45%), Positives = 273/436 (62%), Gaps = 19/436 (4%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N ++ Y R G V V+R+VFDGM +D V+W+++I Y + G AL VF MV + V
Sbjct: 203 NAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMV-AQGV 261
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
K N + L A A LG+L GK +H+ V ++ + SV +G ++IDMY KCG V A++
Sbjct: 262 KANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKE 321
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F+ M ++V +W +MI G H +A+ LF K + G P ITFV VL+ACS GL
Sbjct: 322 VFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGL 381
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V EG + M +++IE +EHYGCMVDLL RAG ++EA +LIEGM++ D V+WG++L
Sbjct: 382 VDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTIL 441
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
AC+ H VDLG KL EL+P + GY+VLL++IYA A +W++V + R LM NR +K
Sbjct: 442 SACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSK 501
Query: 527 TPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
+ G+SL+E G VH FLVGD H +IY L +N +L E GYV D++SV+HD+ EE
Sbjct: 502 SAGWSLMEAHGIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPDVSSVLHDIGDEE 561
Query: 587 KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSK 628
K +++HSE+LA NL VCGDCH ++++KV REIVVRD
Sbjct: 562 KVHAIKVHSERLAIAYGFIVVEAGSPIRIVKNLSVCGDCHEFSKMVTKVFGREIVVRDGS 621
Query: 629 RFHYFKDGLCSCGDYW 644
RFH+ KDG CSC DYW
Sbjct: 622 RFHHMKDGKCSCHDYW 637
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 124/247 (50%), Gaps = 20/247 (8%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
SW++VI + G+ AL F +M + + A+ + + L L GK H+
Sbjct: 232 SWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVV 291
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G V + +ALIDMYSKCG ++ A+++FD +P+ R++ +W SM+ G + +
Sbjct: 292 KRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPR--RDVFAWNSMICGLATHGLGHD 349
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI---K 216
A+ LF++F+ S+ S+ VL+ACSR + V EG F + K
Sbjct: 350 AVQLFEKFV------------SEGFCPTSITFVGVLNACSRTGL--VDEGRRYFKLMAEK 395
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAEALD 275
+SE+ ++D +R G V + ++ +GM I D V W +I++ ++GL +
Sbjct: 396 YDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHGLVDLGIT 455
Query: 276 VFDQMVK 282
V +++++
Sbjct: 456 VGNKLIE 462
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
++ + V+ +++ Y + G V +AR+ F+ M ++ SW+ +I GY AL
Sbjct: 192 ELPIVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALG 251
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
+F M+ GV+ N V+ LSA + GL+++G +++ + + V ++D+
Sbjct: 252 VFKNMVAQGVKANEAAIVTALSAAAQLGLLEQG-KFVHEVVKRVGMTMSVNLGAALIDMY 310
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
+ G + A ++ + M + D W S++ H LG A +LFE
Sbjct: 311 SKCGSVAAAKEVFDAMP-RRDVFAWNSMICGLATH---GLGHDAV-QLFE 355
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +VF+WNS+I LA G +A++ F PT TF + +CS + G
Sbjct: 326 MPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEG 385
Query: 93 KQAHQ-QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFD--EIPQRIRNIVSWTSMLT 149
++ + A + ++ ++D+ S+ G + +A +L + IP + V W ++L+
Sbjct: 386 RRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPP---DPVLWGTILS 442
Query: 150 G 150
Sbjct: 443 A 443
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/606 (37%), Positives = 337/606 (55%), Gaps = 51/606 (8%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++C AL L +Q H A G D F ++ L+ Y+ G+L+ AR+LF+ IP+R
Sbjct: 113 FRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRR-- 167
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG------------GASENSDNVFVD 187
N++SW + GY++N + A LF E + E G E S F+D
Sbjct: 168 NVMSWNILFGGYIKNGDLGGARKLFDE--MPERNVATWNAMVAGLTNLGFDEESLGFFLD 225
Query: 188 ---------SVAIASVLSACS--RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
+ SV C+ R V G H +V++ G D ++ VG++L Y R
Sbjct: 226 MRREGMHPDEFGLGSVFRCCAGLRDVVTG--RQVHAYVVRSGLDRDMCVGSSLAHMYMRC 283
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G + V + V+ N+IIA QNG + AL+ F M++S V + VT +
Sbjct: 284 GCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYF-CMMRSVGVAADVVTFVSA 342
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
+ + + L L G+ IH QV+K +++ V V T ++ MY +CG + + + F +
Sbjct: 343 ISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDT 402
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+AMI+ YG H ++A++LF +M+ G P+ +TF+++L ACSH+GL +EG
Sbjct: 403 FLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFEL 462
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M + ++P V+HY C+VDLLGR+G L EA LI M + D V+W +LL AC+ KN D
Sbjct: 463 MTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFD 522
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
+ E AK++ EL+P++ +VLLSNI A + RW DV R M++ + K PG S VEL+
Sbjct: 523 MAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELK 582
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
G +H F GD+ HP+ ++I E LEE+ K+++ GY DM+ V+HD++ EEKE++L HSE
Sbjct: 583 GHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSE 642
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLRVC DCH I+L+S+V REIVVRD RFH+FKDG C
Sbjct: 643 KLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRC 702
Query: 639 SCGDYW 644
SC DYW
Sbjct: 703 SCRDYW 708
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 164/359 (45%), Gaps = 22/359 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ ++N V +WN+++A L G E+L F MR+ + P + C+ L
Sbjct: 191 LFDEMPERN-VATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLR 249
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D+ +G+Q H G RD+ V S+L MY +CG L + + +P +IVS ++
Sbjct: 250 DVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPS--LSIVSCNTI 307
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G QN ++ AL F S V D V S +S+CS +
Sbjct: 308 IAGRTQNGDSEGALEYF------------CMMRSVGVAADVVTFVSAISSCSDLAALAQG 355
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG V+K G D V V L+ Y+R G + S +VF G D +++I+ Y +
Sbjct: 356 QQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFH 415
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVI 326
G +A+++F QM+ + + VT A+L A +H G+ G C ++ SV
Sbjct: 416 GHGQKAIELFKQMMNG-GAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVK 474
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
T ++D+ + G +D A M + W +++ C+ ++ D+ ++ K
Sbjct: 475 HYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA----CKTQKNFDMAERIAK 529
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/580 (39%), Positives = 319/580 (55%), Gaps = 30/580 (5%)
Query: 10 SSVVSNVDKHSTNTNLTT-------------LFNKYVDKNNVFSWNSVIADLARGGDSVE 56
+ +V N H+ N +L + LF+ N +++N +I L +
Sbjct: 45 TQMVVNSSIHTPNNHLLSKAIHLKNFPYSSLLFSHIAPHPNDYAFNIMIRALTTTWHNYP 104
Query: 57 -ALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALI 115
AL F M LSLTP TFP SC+ L L AH F H D + +LI
Sbjct: 105 LALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLI 164
Query: 116 DMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG 175
Y++CG ++ ARK+FDEIP R + VSW SM+ GY + AREA+ +F+E
Sbjct: 165 TAYARCGLVASARKVFDEIPHR--DSVSWNSMIAGYAKAGCAREAVEVFREM-------- 214
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYAR 235
D D +++ S+L AC + + GFV++RG +G+ LI YA+
Sbjct: 215 ---GRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAK 271
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
G ++ +R++FDGM +D +TWN++I+ YAQNG+A EA+ +F M K V N +TL+A
Sbjct: 272 CGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGM-KEDCVTANKITLTA 330
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
VL A A +G L LGK I + + + + V T++IDMY K G +D A++ F M +KN
Sbjct: 331 VLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKN 390
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIK--AGVRPNYITFVSVLSACSHAGLVQEGWHW 413
SW AMI+ H +A+EAL LF M G RPN ITFV +LSAC HAGLV EG+
Sbjct: 391 EASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRL 450
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
+ M F + P +EHY CMVDLL RAG L EA+DLI M K D V G+LLGACR K
Sbjct: 451 FDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKK 510
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
NVD+GE + + E++P+N G +++ S IYAN WED R R LM+ + + KTPG S +
Sbjct: 511 NVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWI 570
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
E+ +H F GD + ++ L +L+ GYV
Sbjct: 571 EVENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKREGYVP 610
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/440 (45%), Positives = 287/440 (65%), Gaps = 19/440 (4%)
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
E H I+ GF+S V V NTL+ YA GH + + K+F+ M E++ VTWNS+I YA N
Sbjct: 15 EKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALN 74
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EAL +F +M V+ + T+ ++L A A LG L LG+ H ++K+ L+ ++
Sbjct: 75 GRPNEALTLFREM-GLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHA 133
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G +++D+Y KCG + A K F++M+EK+V SWT++I G ++ +EAL+LF ++ + G+
Sbjct: 134 GNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGL 193
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ ITFV VL ACSH G+V EG+ + M E+ I P +EHYGCMVDLLGRAG +K+A+
Sbjct: 194 MPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAH 253
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
+ I+ M ++ + VVW +LLGAC IH ++ LGE+A +L +LEP + G +VLLSN+YA+
Sbjct: 254 EFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQ 313
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
RW DV + R M + KTPG SLVELR ++H F++GD+ HPQ E+IY L E+ L+
Sbjct: 314 RWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLK 373
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GYV +++V+ D+++EEKE L HSEK+A NLRVC DCH
Sbjct: 374 LEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHL 433
Query: 610 VIRLISKVVDREIVVRDSKR 629
I+LISKV DREIVVRD R
Sbjct: 434 AIKLISKVFDREIVVRDRSR 453
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 144/294 (48%), Gaps = 23/294 (7%)
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
++ + L D+ G++ H A GF VFV + L+ MY+ CG A KLF+ + +R N
Sbjct: 3 RAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAER--N 60
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSR 200
+V+W S++ GY N EAL LF+E L V D + S+LSAC+
Sbjct: 61 LVTWNSVINGYALNGRPNEALTLFREMGLR------------GVEPDGFTMVSLLSACAE 108
Query: 201 VTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSI 260
+ + AH +++K G D + GN L+D YA+ G + + KVFD M EK V+W S+
Sbjct: 109 LGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSL 168
Query: 261 IAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
I A NG EAL++F ++ + + + +T VL A +H G++ G D +M
Sbjct: 169 IVGLAVNGFGKEALELFKELERK-GLMPSEITFVGVLYACSHCGMVDEG---FDYFKRMK 224
Query: 321 LEESVIVGTS----IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
E ++ ++D+ + G V A + M + N W ++ +H
Sbjct: 225 EEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIH 278
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 8/171 (4%)
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
AIA L +R G+ +H I+ E V V +++ MY CG + A K F M E+N+ +
Sbjct: 4 AIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVT 63
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH---WLN 415
W ++I GY ++ R EAL LF +M GV P+ T VS+LSAC+ G + G ++
Sbjct: 64 WNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMV 123
Query: 416 TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+G + N+ G ++DL + G +++A+ + + M+ K+ V W SL+
Sbjct: 124 KVGLDGNLHAG----NALLDLYAKCGSIRQAHKVFDEMEEKS-VVSWTSLI 169
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 20/230 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N+ +WNSVI A G EAL F M + P T + +C+ L L G++AH
Sbjct: 60 NLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAH 119
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
G ++ +AL+D+Y+KCG + A K+FDE+ + +++VSWTS++ G N
Sbjct: 120 VYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEE--KSVVSWTSLIVGLAVNGF 177
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+EAL LFKE + + VL ACS + V EG F
Sbjct: 178 GKEALELFKEL------------ERKGLMPSEITFVGVLYACSHCGM--VDEGFDYFKRM 223
Query: 217 R---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
+ G ++ ++D R G V + + M ++ +AV W +++
Sbjct: 224 KEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLG 273
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+++ +V SW S+I LA G EAL F + + L P+ TF + +CS + G
Sbjct: 157 MEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEG 216
Query: 93 ----KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
K+ ++ +G + ++D+ + G + A + +P + N V W ++L
Sbjct: 217 FDYFKRMKEE---YGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQP-NAVVWRTLL 272
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/663 (33%), Positives = 348/663 (52%), Gaps = 70/663 (10%)
Query: 37 NVFSWNSVIADLARGGDSVE-ALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
N WNS + + S+ L F + + + A+K+C+ + D+ G +
Sbjct: 486 NYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEI 545
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H GF DV++ AL++ Y +C L A ++F E+P + W + +Q++
Sbjct: 546 HGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNP--EALLWNEAIILNLQSE 603
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC-SRVTVNGVTEGAHGFV 214
++ + LF++ + ++ I VL A S + + + HG+V
Sbjct: 604 KLQKGVELFRKMQF------------SFLKAETATIVRVLQASISELGFLNMGKETHGYV 651
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM------------------------- 249
++ GFD +V VG +LID Y + + ++ VFD M
Sbjct: 652 LRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDAL 711
Query: 250 ----------IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA 299
I+ D VTWN +I+ YA G EAL F QM + V N+ +++ +L A
Sbjct: 712 RLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQM-QQEGVMPNSASITCLLRA 770
Query: 300 IAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
A L +L+ GK IH I+ E V V T++IDMY K + A K F +++ K + SW
Sbjct: 771 CASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASW 830
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
MI G+ + +EA+ +F +M K GV P+ ITF ++LSAC ++GL+ EGW + ++M
Sbjct: 831 NCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMIT 890
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGE 479
++ I P +EHY CMVDLLGRAG L EA+DLI M +K D +WG+LLG+CRIHKN+ E
Sbjct: 891 DYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAE 950
Query: 480 IAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKV 539
AAK LF+LEPNN ++L+ N+Y+ RWED++ R LM + +S +++ +V
Sbjct: 951 TAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRV 1010
Query: 540 HAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
H F +K HP KIY L +L +++++GYV D+ V ++D+ EK+ L H+EKLA
Sbjct: 1011 HVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLA 1070
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
N R+C DCH+ + IS V RE+ +RD RFH+F++G CSC
Sbjct: 1071 ITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCN 1130
Query: 642 DYW 644
D+W
Sbjct: 1131 DFW 1133
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 147/298 (49%), Gaps = 16/298 (5%)
Query: 139 RNIVSWTSMLTGYVQNDNAREALL-LFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
RN + W S + + + + +L +FKE + V DS + L
Sbjct: 485 RNYLKWNSFVEEFKSSAGSLHIVLEVFKEL------------HGKGVVFDSEVYSVALKT 532
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C+RV + HG +IKRGFD +V + L++ Y R ++ + +VF M +A+ W
Sbjct: 533 CTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLW 592
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA-IAHLGVLRLGKCIHDQV 316
N I + Q+ + +++F +M + + +K T+ VL A I+ LG L +GK H V
Sbjct: 593 NEAIILNLQSEKLQKGVELFRKM-QFSFLKAETATIVRVLQASISELGFLNMGKETHGYV 651
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
++ + V VGTS+IDMY K + A+ F+ MK +N+ +W ++++GY +AL
Sbjct: 652 LRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDAL 711
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMV 434
L +M K G++P+ +T+ ++S + G +E + M E + P C++
Sbjct: 712 RLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQE-GVMPNSASITCLL 768
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 24/234 (10%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K ++ +WN +I+ A G EAL F+ M++ + P ++ C +++C++L L GK+
Sbjct: 723 KPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKE 782
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN--IVSWTSMLTGYV 152
H + GF DVFV++ALIDMYSK L +A K+F +RI+N + SW M+ G+
Sbjct: 783 IHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVF----RRIQNKTLASWNCMIMGFA 838
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+EA+ +F E V D++ ++LSAC + G EG
Sbjct: 839 IFGLGKEAISVFNEM------------QKVGVGPDAITFTALLSACKNSGLIG--EGWKY 884
Query: 213 F---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
F + + ++D R G++D + + M ++ DA W +++
Sbjct: 885 FDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLG 938
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/654 (35%), Positives = 349/654 (53%), Gaps = 87/654 (13%)
Query: 61 FSSMRKLSLTPTRS-TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYS 119
++ R + +P SC DL KQ H G +D ++ +I +
Sbjct: 6 YNPNRTFNFSPQPPLILSKPFTSCKTPRDL---KQLHAIFIKTGQIQDPLTAAEVIKFCA 62
Query: 120 -KCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR---EALLLFKEFLLEESECG 175
++ AR +F ++P+ N W ++L + ++ EAL+LF L C
Sbjct: 63 FSSRDIDYARAVFRQMPEP--NCFCWNTILRVLAETNDEHLQSEALMLFSAML-----CD 115
Query: 176 GASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF---------------- 219
G + + F SVL AC+R + + HG ++K GF
Sbjct: 116 GRVKPNRFTF------PSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVM 169
Query: 220 -------------------------------DSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
D V + N +ID R G + ++ +FD
Sbjct: 170 CAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDE 229
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M ++ V+WN +I+ YAQNG EA+++F +M +S+++ N VTL +VL AIA +G L L
Sbjct: 230 MPQRSVVSWNVMISGYAQNGHFIEAINLFQEM-QSSNIDPNYVTLVSVLPAIARIGALEL 288
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK IH K +E ++G++++DMY KCG +D A + F + ++N +W+A+I + M
Sbjct: 289 GKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAM 348
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H RA +A+ F+ M KAGV PN + ++ +LSACSHAGLV+EG + + M ++P +E
Sbjct: 349 HGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIE 408
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HYGCMVDLLGRAG L+EA +LI M ++ D V+W +LLGAC++HKN+ +GE A+ L EL
Sbjct: 409 HYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMEL 468
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
P++ G +V LSN+YA+ G WE V R R MK + K PG S +E+ G +H FLV D
Sbjct: 469 APHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDS 528
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
H + ++I L E+++KL+ GY + V + D++E+ L+ HSEK+A
Sbjct: 529 HSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTA 588
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH ++LIS + R+I+VRD KRFH F+ G CSC DYW
Sbjct: 589 PQHPLKIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 182/392 (46%), Gaps = 68/392 (17%)
Query: 31 KYVDKNNVFSWNSVIADLARGGD---SVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSAL 86
+ + + N F WN+++ LA D EAL FS+M + P R TFP +K+C+
Sbjct: 76 RQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARA 135
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC------------------------- 121
L GKQ H FGFH D FV S L+ MY C
Sbjct: 136 SRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMEL 195
Query: 122 ----------------------GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G++ A+ LFDE+PQ R++VSW M++GY QN + E
Sbjct: 196 DKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQ--RSVVSWNVMISGYAQNGHFIE 253
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A+ LF+E S N+ + V + SVL A +R+ + + H + K
Sbjct: 254 AINLFQEM------------QSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKI 301
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+ + +G+ L+D Y++ G +D + +VF+ + +++A+TW++II +A +G A +A+ F
Sbjct: 302 EIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHL 361
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKC 338
M K+ V N V +L A +H G++ G+ ++K + L+ + ++D+ +
Sbjct: 362 MGKA-GVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRA 420
Query: 339 GQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
G ++ A + M E + W A++ MH
Sbjct: 421 GHLEEAEELIRNMPIEPDDVIWKALLGACKMH 452
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/604 (36%), Positives = 328/604 (54%), Gaps = 65/604 (10%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K+ H Q G ++ + + L++ Y KCG + DA +LFD +P+R + V+W S+LT
Sbjct: 22 AKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRR--DPVAWASLLTAC 79
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG-- 209
++ AL + + L S D AS++ AC+ + V V +G
Sbjct: 80 NLSNRPHRALSISRSLL------------STGFHPDHFVFASLVKACANLGVLHVKQGKQ 127
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
H F + V ++LID YA+ G D R VFD + ++++W ++I+ YA++G
Sbjct: 128 VHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGR 187
Query: 270 AAEALDVFDQ---------------MVKSTD----------------VKCNAVTLSAVLL 298
EA +F Q +V+S + + + LS+V+
Sbjct: 188 KFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVG 247
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
A A+L + LGK +H VI + E + + ++IDMY KC + A+ F +M K+V S
Sbjct: 248 ACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVS 307
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
WT++I G H +A EAL L+ +M+ AGV+PN +TFV ++ ACSHAGLV +G TM
Sbjct: 308 WTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMV 367
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
+ I P ++HY C++DL R+G L EA +LI M V D W +LL +C+ H N +
Sbjct: 368 EDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMA 427
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
A L L+P + ++LLSNIYA AG WEDV + R LM K PG+S ++L
Sbjct: 428 VRIADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKG 487
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
H F G+ HP ++I + EL+ ++++ GY D +SV+HD+DQ+EKE L HSE+L
Sbjct: 488 SHVFYAGETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERL 547
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVCGDCHTV++LIS + +REI VRD+KR+H+FKDG CSC
Sbjct: 548 AVAYGLLKAVPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSC 607
Query: 641 GDYW 644
D+W
Sbjct: 608 NDFW 611
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 194/413 (46%), Gaps = 44/413 (10%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKY---------------VDKNNVFSWNSVIAD 47
L+K + + +++H N TL N Y + + + +W S++
Sbjct: 21 LAKKLHAQIIKAGLNQHEPIPN--TLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTA 78
Query: 48 LARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH--SGKQAHQQAFIFGFH 105
AL S+ P F +K+C+ L LH GKQ H + F+ F
Sbjct: 79 CNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFS 138
Query: 106 RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK 165
D V S+LIDMY+K G R +FD I N +SWT+M++GY ++ EA LF+
Sbjct: 139 DDDVVKSSLIDMYAKFGLPDYGRAVFDSISSL--NSISWTTMISGYARSGRKFEAFRLFR 196
Query: 166 EF----------LLEESECGGASENSDNVFV----------DSVAIASVLSACSRVTVNG 205
+ L+ G ++ ++FV D + ++SV+ AC+ + +
Sbjct: 197 QTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWE 256
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ + HG VI G++S + + N LID YA+ + ++ +F M KD V+W SII A
Sbjct: 257 LGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTA 316
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEES 324
Q+G A EAL ++D+MV + VK N VT ++ A +H G++ G+ + +++ + S
Sbjct: 317 QHGQAEEALALYDEMVLA-GVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPS 375
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREAL 376
+ T ++D++ + G +D A M + +W A+++ H + A+
Sbjct: 376 LQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAV 428
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 54/101 (53%)
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
L K +H Q+IK L + + ++++ Y KCG + A + F+ + ++ +W +++
Sbjct: 21 LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ 408
+ R AL + ++ G P++ F S++ AC++ G++
Sbjct: 81 LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLH 121
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 271/436 (62%), Gaps = 19/436 (4%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
++ A A GG D +R++FDGM ++D V WN++IA Y G + EAL +FD+M +
Sbjct: 272 TAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEM-RHAGA 330
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
VTL + L A A LG L GK +H + SV +GT++IDMY KCG V A +
Sbjct: 331 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 390
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F+ M E+NV +WT+ ++G M+ R+ L LF +M GV PN +TFV VL CS AGL
Sbjct: 391 VFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGL 450
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V EG ++M I+P +EHYGCMVDL GRAG+L +A + I GM ++ VWG+LL
Sbjct: 451 VDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 510
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
A RIHKNV+LG+ A KL +E N HVLLSNIYA++ W+ V R++MK + + K
Sbjct: 511 NASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKK 570
Query: 527 TPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
PG S +E+ GKVH F VG K HP+H++I L E+N +L+ GY+ + V+ D+++E+
Sbjct: 571 VPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEED 630
Query: 587 KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSK 628
KE + +HSEKLA NLRVC DCH ++ISKV +REIV+RD
Sbjct: 631 KEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRN 690
Query: 629 RFHYFKDGLCSCGDYW 644
RFH+FKDG CSC DYW
Sbjct: 691 RFHHFKDGACSCKDYW 706
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 130/265 (49%), Gaps = 17/265 (6%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
DV +A++ + GE AR+LFD +PQR + V+W +M+ GYV +REAL LF E
Sbjct: 267 DVVCVTAMVGALATGGEADAARELFDGMPQR--DHVAWNAMIAGYVHTGRSREALRLFDE 324
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVG 226
G A V V + S L+AC+++ + H RG V +G
Sbjct: 325 M----RHAGAA--------VGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLG 372
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
LID Y++ G V + +VFD M E++ TW S ++ A NG+ + L +F +M +ST V
Sbjct: 373 TALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRM-ESTGV 431
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGK-CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
+ N VT VL + G++ G+ C ++ + ++D+Y + G++D A
Sbjct: 432 EPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAV 491
Query: 346 KAFNQMK-EKNVRSWTAMIAGYGMH 369
N M E + W A++ +H
Sbjct: 492 NFINGMPLEPHEGVWGALLNASRIH 516
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 110/238 (46%), Gaps = 21/238 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +++V +WN++IA G S EALR F MR T A+ +C+ L
Sbjct: 290 LFDGMPQRDHV-AWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLG 348
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H A G V + +ALIDMYSKCG ++ A ++FD + + RN+ +WTS
Sbjct: 349 ALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGE--RNVYTWTSA 406
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G N R+ L LFK S V + V VL CS + V
Sbjct: 407 VSGLAMNGMGRDCLALFKRM------------ESTGVEPNGVTFVVVLRGCSMAGL--VD 452
Query: 208 EGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
EG F + G D + ++D Y R G +D + +GM +E W +++
Sbjct: 453 EGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 510
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V+ T+++ G+ D AR+ F+ M +++ +W AMIAGY R+REAL LF +M
Sbjct: 268 VVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 327
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
AG +T VS L+AC+ G ++ G W+++ H + V ++D+ + G +
Sbjct: 328 AGAAVGEVTLVSALTACAQLGALERG-KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 386
Query: 445 EAYDLIEGM 453
A ++ + M
Sbjct: 387 AAMEVFDSM 395
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/519 (38%), Positives = 322/519 (62%), Gaps = 30/519 (5%)
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
+ +M+ GYV N+ + E L F ++E + D+ +L AC+R+
Sbjct: 101 FKTMIRGYV-NEMSFEVALCFYNEMMERG-----------IEPDNFTYPCLLKACTRLKA 148
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ HG V K G +++V V N+LI+ Y R G +++S VF+ + K A +W+S+ +
Sbjct: 149 IREGKQIHGHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSSMFSA 208
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
G+ +E L +F +M + T++K + + L A A+ G L LG IH +++ E
Sbjct: 209 CVGMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRNISEL 268
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
++IV TS++DMY KCG +D A F +M+++N +++AMI+G+ +H AL +F +MI
Sbjct: 269 NIIVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMFSEMI 328
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
K G+ P+++ +VS+L+ACSH+GLV+EG M E +EP EHYGC+VDLLGRAG L
Sbjct: 329 KEGLEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLL 388
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
+EA + I+ + ++ + VVW S L CR+H+N++LG+IAA++L +L +N G ++L+SN+Y
Sbjct: 389 EEALETIQSIPIEQNDVVWRSFLSQCRVHQNIELGQIAAQELLKLCSHNPGDYLLISNMY 448
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
+ A W+DV R+R+ + + L +TPGFS V+++GK H F+ D+ HPQ ++IY+ L ++
Sbjct: 449 SQAHMWDDVARSRTEIAIKGLKQTPGFSTVKVKGKTHRFVSQDRSHPQCKEIYKMLHQME 508
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
+L+ GY D+T ++ +VD+EEK+ L+ HS+K+A NLR+C
Sbjct: 509 WQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFALLYTPPGSIIKIARNLRMCS 568
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCHT + IS + +REIVVRD RFH FK G CSC DYW
Sbjct: 569 DCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 607
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 175/348 (50%), Gaps = 20/348 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+D F + ++I AL ++ M + + P T+PC +K+C+ L + G
Sbjct: 93 IDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLKAIREG 152
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H F G DVFV ++LI+MY +CGE+ + +F+++ ++ SW+SM + V
Sbjct: 153 KQIHGHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKL--EFKSAASWSSMFSACV 210
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
E L+LF+E E N+ + + S LSAC+ + HG
Sbjct: 211 GMGMWSECLMLFREMCRE-----------TNLKAEESGMVSALSACANTGALNLGMSIHG 259
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
F+++ + + V +L+D Y + G +D + +F M +++ +T++++I+ +A +G
Sbjct: 260 FLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGES 319
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSI 331
AL +F +M+K ++ + V ++L A +H G+++ G+ + +++K +E + +
Sbjct: 320 ALRMFSEMIKE-GLEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCL 378
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
+D+ + G ++ A + + E+N W + ++ CR + ++L
Sbjct: 379 VDLLGRAGLLEEALETIQSIPIEQNDVVWRSFLS----QCRVHQNIEL 422
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
++ A F + + + MI GY AL + +M++ G+ P+ T+ +L A
Sbjct: 83 MNYAASIFRGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKA 142
Query: 401 CSHAGLVQEGWHWLNTMGHEFN--IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
C+ ++EG GH F +E V ++++ GR G+++ + + E ++ K+
Sbjct: 143 CTRLKAIREG---KQIHGHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSA 199
Query: 459 FVVWGSLLGAC 469
W S+ AC
Sbjct: 200 -ASWSSMFSAC 209
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/647 (35%), Positives = 355/647 (54%), Gaps = 38/647 (5%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-SLTPTRSTF 76
K T+ +F++ +D + S+N++I + E++R F + L P T
Sbjct: 254 KFRRPTDARRVFDE-MDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTV 310
Query: 77 PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQ 136
+++C L DL K + GF + V + LID+Y+KCG++ AR +F+ +
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM-- 368
Query: 137 RIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLS 196
++ VSW S+++GY+Q+ + EA+ LFK ++ E + D + ++S
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ------------ADHITYLMLIS 416
Query: 197 ACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT 256
+R+ +G H IK G ++ V N LID YA+ G V S K+F M D VT
Sbjct: 417 VSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT 476
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
WN++I+ + G A L V QM KS +V + T L A L RLGK IH +
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKS-EVVPDMATFLVTLPMCASLAAKRLGKEIHCCL 535
Query: 317 IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREAL 376
++ E + +G ++I+MY KCG ++ + + F +M ++V +WT MI YGM+ +AL
Sbjct: 536 LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKAL 595
Query: 377 DLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDL 436
+ F M K+G+ P+ + F++++ ACSH+GLV EG M + I+P +EHY C+VDL
Sbjct: 596 ETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDL 655
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYH 496
L R+ K+ +A + I+ M +K D +W S+L ACR +++ E ++++ EL P++ GY
Sbjct: 656 LSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYS 715
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
+L SN YA +W+ V R +K++ + K PG+S +E+ VH F GD PQ E IY
Sbjct: 716 ILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIY 775
Query: 557 EYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI-HSEKLA---------------- 599
+ LE L + + GY+ D V ++++EE++ L HSE+LA
Sbjct: 776 KSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQV 835
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH V +LISK+V REI+VRD+ RFH FKDG CSC D W
Sbjct: 836 MKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 138/457 (30%), Positives = 244/457 (53%), Gaps = 21/457 (4%)
Query: 16 VDKHS---TNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPT 72
+DK+S + ++F + NV+ WNS+I ++ G EAL + +R+ ++P
Sbjct: 46 IDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPD 105
Query: 73 RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFD 132
+ TFP IK+C+ L D G ++Q GF D+FV +AL+DMYS+ G L+ AR++FD
Sbjct: 106 KYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFD 165
Query: 133 EIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIA 192
E+P +R++VSW S+++GY + EAL ++ E + + DS ++
Sbjct: 166 EMP--VRDLVSWNSLISGYSSHGYYEEALEIYHEL------------KNSWIVPDSFTVS 211
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK 252
SVL A + V +G HGF +K G +S V V N L+ Y + +R+VFD M +
Sbjct: 212 SVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR 271
Query: 253 DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCI 312
D+V++N++I Y + + E++ +F + + K + +T+S+VL A HL L L K I
Sbjct: 272 DSVSYNTMICGYLKLEMVEESVRMFLENLD--QFKPDLLTVSSVLRACGHLRDLSLAKYI 329
Query: 313 HDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA 372
++ ++K V +ID+Y KCG + AR FN M+ K+ SW ++I+GY
Sbjct: 330 YNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDL 389
Query: 373 REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC 432
EA+ LF M+ + ++IT++ ++S + ++ G L++ G + I +
Sbjct: 390 MEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSVSNA 448
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
++D+ + G++ ++ + M D V W +++ AC
Sbjct: 449 LIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISAC 484
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 111/201 (55%), Gaps = 2/201 (0%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWNSIIAIYAQNGL 269
H VI G DS LID Y+ S VF + K+ WNSII +++NGL
Sbjct: 27 HALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGL 86
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EAL+ + ++ + + V + T +V+ A A L +G +++Q++ M E + VG
Sbjct: 87 FPEALEFYGKL-RESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGN 145
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+++DMY + G + AR+ F++M +++ SW ++I+GY H EAL++++++ + + P
Sbjct: 146 ALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVP 205
Query: 390 NYITFVSVLSACSHAGLVQEG 410
+ T SVL A + +V++G
Sbjct: 206 DSFTVSSVLPAFGNLLVVKQG 226
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 271/436 (62%), Gaps = 19/436 (4%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
++ A A GG D +R++FDGM ++D V WN++IA Y G + EAL +FD+M +
Sbjct: 272 TAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEM-RHAGA 330
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
VTL + L A A LG L GK +H + SV +GT++IDMY KCG V A +
Sbjct: 331 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 390
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F+ M E+NV +WT+ ++G M+ R+ L LF +M GV PN +TFV VL CS AGL
Sbjct: 391 VFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGL 450
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V EG ++M I+P +EHYGCMVDL GRAG+L +A + I GM ++ VWG+LL
Sbjct: 451 VDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 510
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
A RIHKNV+LG+ A KL +E N HVLLSNIYA++ W+ V R++MK + + K
Sbjct: 511 NASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKK 570
Query: 527 TPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
PG S +E+ GKVH F VG K HP+H++I L E+N +L+ GY+ + V+ D+++E+
Sbjct: 571 VPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEED 630
Query: 587 KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSK 628
KE + +HSEKLA NLRVC DCH ++ISKV +REIV+RD
Sbjct: 631 KEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRN 690
Query: 629 RFHYFKDGLCSCGDYW 644
RFH+FKDG CSC DYW
Sbjct: 691 RFHHFKDGACSCKDYW 706
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 130/265 (49%), Gaps = 17/265 (6%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
DV +A++ + GE AR+LFD +PQR + V+W +M+ GYV +REAL LF E
Sbjct: 267 DVVCVTAMVGALATGGEADAARELFDGMPQR--DHVAWNAMIAGYVHTGRSREALRLFDE 324
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVG 226
G A V V + S L+AC+++ + H RG V +G
Sbjct: 325 M----RHAGAA--------VGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLG 372
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
LID Y++ G V + +VFD M E++ TW S ++ A NG+ + L +F +M +ST V
Sbjct: 373 TALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRM-ESTGV 431
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGK-CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
+ N VT VL + G++ G+ C ++ + ++D+Y + G++D A
Sbjct: 432 EPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAV 491
Query: 346 KAFNQMK-EKNVRSWTAMIAGYGMH 369
N M E + W A++ +H
Sbjct: 492 NFINGMPLEPHEGVWGALLNASRIH 516
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 110/238 (46%), Gaps = 21/238 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +++V +WN++IA G S EALR F MR T A+ +C+ L
Sbjct: 290 LFDGMPQRDHV-AWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLG 348
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H A G V + +ALIDMYSKCG ++ A ++FD + + RN+ +WTS
Sbjct: 349 ALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGE--RNVYTWTSA 406
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G N R+ L LFK S V + V VL CS + V
Sbjct: 407 VSGLAMNGMGRDCLALFKRM------------ESTGVEPNGVTFVVVLRGCSMAGL--VD 452
Query: 208 EGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
EG F + G D + ++D Y R G +D + +GM +E W +++
Sbjct: 453 EGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 510
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V+ T+++ G+ D AR+ F+ M +++ +W AMIAGY R+REAL LF +M
Sbjct: 268 VVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 327
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
AG +T VS L+AC+ G ++ G W+++ H + V ++D+ + G +
Sbjct: 328 AGAAVGEVTLVSALTACAQLGALERG-KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 386
Query: 445 EAYDLIEGM 453
A ++ + M
Sbjct: 387 AAMEVFDSM 395
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/436 (45%), Positives = 278/436 (63%), Gaps = 19/436 (4%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
++ A + GG VD +R++FDGM ++D V WN+++ Y + G + EAL +FD+M K+ V
Sbjct: 194 TAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKA-GV 252
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+ VTL +VL A A +G L G +H V + SV +GT+++DMY KCG V ++ +
Sbjct: 253 AVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSME 312
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F M+E+N+ +WT+ ++G M+ E L+LF +M AG+ PN +TFV+VL CS AGL
Sbjct: 313 VFETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGL 372
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V+EG ++M + +EP +EHYGCMVDL GRAG+L +A D I M V+ VWG+LL
Sbjct: 373 VEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALL 432
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
A RIH NVDLG+ A KL E+E N HVLLSNIYA + W+ V + R++MK++ + K
Sbjct: 433 NASRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSKGVKK 492
Query: 527 TPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
PG S +E+ GKVH F VG K HP+++ I L E++ +L+ GY + V+ D+++EE
Sbjct: 493 MPGCSAIEVDGKVHEFFVGSKSHPRYKDIQTMLAEMSHRLRLQGYAANTKEVLFDIEEEE 552
Query: 587 KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSK 628
KE + +HSEKLA NLRVC DCH +LISKV DREIV+RD
Sbjct: 553 KEGAISLHSEKLALAFGLITLPEDTVIRIVKNLRVCKDCHDYTKLISKVFDREIVMRDRN 612
Query: 629 RFHYFKDGLCSCGDYW 644
RFH+FK G CSC DYW
Sbjct: 613 RFHHFKHGACSCRDYW 628
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 137/265 (51%), Gaps = 17/265 (6%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
DV +A++ S G++ AR+LFD +PQR + V+W +MLTGYV+ +REAL LF E
Sbjct: 189 DVVCVTAMLGALSAGGDVDTARELFDGMPQR--DHVAWNAMLTGYVRVGRSREALGLFDE 246
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVG 226
V V V + SVL+AC+++ H +V RG V +G
Sbjct: 247 M------------QKAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLG 294
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
L+D Y++ G V +S +VF+ M E++ TW S ++ A NG+ E L++F +M +S +
Sbjct: 295 TALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFKRM-ESAGM 353
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGK-CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
+ N VT AVL + G++ G+ C K +E + ++D+Y + G++D A
Sbjct: 354 EPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAV 413
Query: 346 KAFNQMK-EKNVRSWTAMIAGYGMH 369
N M E + W A++ +H
Sbjct: 414 DFINSMPVEPHEGVWGALLNASRIH 438
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 21/238 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +++V +WN+++ R G S EAL F M+K + + T + +C+ +
Sbjct: 212 LFDGMPQRDHV-AWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMG 270
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G H G V + +AL+DMYSKCG ++ + ++F+ + R RNI +WTS
Sbjct: 271 ALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETM--RERNIYTWTSA 328
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
L+G N E L LFK E G N V +VL CS + V
Sbjct: 329 LSGLAMNGMGEECLELFKRM-----ESAGMEPN-------GVTFVAVLRGCSVAGL--VE 374
Query: 208 EGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
EG F K + + ++D Y R G +D + + M +E W +++
Sbjct: 375 EGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALL 432
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V+ T+++ G VD AR+ F+ M +++ +W AM+ GY R+REAL LF +M K
Sbjct: 190 VVCVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQK 249
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
AGV + +T VSVL+AC+ G ++ G W+++ + V +VD+ + G +
Sbjct: 250 AGVAVSEVTLVSVLTACAQMGALERGM-WVHSYVCSRGMRVSVTLGTALVDMYSKCGVVT 308
Query: 445 EAYDLIEGMKVKADFVVWGSLL 466
+ ++ E M+ + + W S L
Sbjct: 309 MSMEVFETMRER-NIYTWTSAL 329
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/617 (37%), Positives = 338/617 (54%), Gaps = 80/617 (12%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA--RKLFDEIPQRIRNIVSWT 145
+L+ KQ H G + ++ + LI +K G D R++ + P + RN WT
Sbjct: 62 NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIE--PVQFRNPFLWT 119
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+++ GY EA+ ++ EE + S +++L AC +
Sbjct: 120 AVIRGYTIEGKFDEAIAMYGCMRKEE------------ITPVSFTFSALLKACGSMGDLN 167
Query: 206 VTEGAHGFVIK-RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
+ H + RGF V VGNT+ID Y + G + +RKVFD M E+D ++W +IA Y
Sbjct: 168 LGRQFHAQTFRLRGF-CFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAY 226
Query: 265 A-------------------------------QNGLAAEALDVFDQMVKSTDVKCNAVTL 293
A QN EAL+ FD+M KS ++ + VT+
Sbjct: 227 ARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKS-GIRADEVTV 285
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKM------DLEESVIVGTSIIDMYCKCGQVDLARKA 347
+ + A A LG + D+ +++ + V++G+++IDMY KCG V+ A
Sbjct: 286 AGYISACAQLGASKYA----DRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 341
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI-KAGVRPNYITFVSVLSACSHAGL 406
F M KNV S+++MI G H RA+EALDLF+ M+ + ++PN +TFV L+ACSH+GL
Sbjct: 342 FVSMNNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGL 401
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V +G +M F +EP +HY CMVDLLGRAG+L+EA +LI+ M V+ VWG+LL
Sbjct: 402 VDQGRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALL 461
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
GACRIH N D+ EIAA+ LFELEP+ G ++LLSN+Y++AG W V R L+K + L K
Sbjct: 462 GACRIHNNPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKK 521
Query: 527 TPGFS-LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQE 585
TP S +V+ G++H F G+ HP +KI + LEEL +L +GY D++SV +DV
Sbjct: 522 TPAVSWVVDKNGQMHKFFPGNLNHPMSKKIQDKLEELVERLTALGYQPDLSSVPYDVSDN 581
Query: 586 EKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDS 627
K + L H+EKLA NLR+C DCH +RL S+V R I++RD+
Sbjct: 582 AKRLILIQHTEKLALAFSLLTTNRDYTIKIMKNLRMCQDCHMFMRLASEVTGRVIIMRDN 641
Query: 628 KRFHYFKDGLCSCGDYW 644
RFH+F+ G CSCGD+W
Sbjct: 642 MRFHHFRSGACSCGDFW 658
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 180/370 (48%), Gaps = 45/370 (12%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V N F W +VI G EA+ + MRK +TP TF +K+C ++ DL+ G
Sbjct: 110 VQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLG 169
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR--------------- 137
+Q H Q F V+V + +IDMY KCG + ARK+FDE+P+R
Sbjct: 170 RQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARV 229
Query: 138 --------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+++V+WT+M+TG+ QN +EAL F +E+S
Sbjct: 230 GNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDR--MEKS----------G 277
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSE--VGVGNTLIDAYARGGHVDV 241
+ D V +A +SAC+++ + + A K G+ V +G+ LID Y++ G+V+
Sbjct: 278 IRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEE 337
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ VF M K+ +++S+I A +G A EALD+F MV T +K N VT L A +
Sbjct: 338 AVNVFVSMNNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACS 397
Query: 302 HLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSW 359
H G++ G+ + + + +E + T ++D+ + G++ A + M E + W
Sbjct: 398 HSGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVW 457
Query: 360 TAMIAGYGMH 369
A++ +H
Sbjct: 458 GALLGACRIH 467
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/631 (35%), Positives = 347/631 (54%), Gaps = 34/631 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSALHDLHS 91
+ + NV SW +++ G E L+ F SM + P KSCS +
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
GKQ H +G FV + L+ MYS C +A ++ D++P ++ ++S L+GY
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLP--YCDLSVFSSALSGY 212
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
++ +E L + ++ + N D V+ +++ S L S + + H
Sbjct: 213 LECGAFKEGLDVLRK-----------TANEDFVW-NNLTYLSSLRLFSNLRDLNLALQVH 260
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+++ GF++EV LI+ Y + G V +++VFD ++ +I+ Y Q+
Sbjct: 261 SRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFE 320
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EAL++F +M + +V N T + +L +IA L +L+ G +H V+K V+VG ++
Sbjct: 321 EALNLFSKM-DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNAL 379
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
++MY K G ++ ARKAF+ M +++ +W MI+G H REAL+ F +MI G PN
Sbjct: 380 VNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNR 439
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
ITF+ VL ACSH G V++G H+ N + +F+++P ++HY C+V LL +AG K+A D +
Sbjct: 440 ITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMR 499
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
++ D V W +LL AC + +N LG+ A+ E PN+ G +VLLSNI+A + WE
Sbjct: 500 TAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEG 559
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
V + RSLM NR + K PG S + +R + H FL D +HP+ IY ++E+ K++ +GY
Sbjct: 560 VAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGY 619
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
D+ HDVD+E++E L HSEKLA N+R+C DCH+ I+L
Sbjct: 620 SPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKL 679
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
ISK+ R IV+RDS RFH+F DG CSC DYW
Sbjct: 680 ISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 195/421 (46%), Gaps = 38/421 (9%)
Query: 68 SLTPT--RSTFPC-----AIKSCSALHDLHSGKQAHQQAFIFGFH---RDVFVSSALIDM 117
SL P ++ FP +K C+ L G+ H + D + ++LI++
Sbjct: 19 SLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINL 78
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
Y KC E ARKLFD +P+ RN+VSW +M+ GY + E L LFK +
Sbjct: 79 YVKCRETVRARKLFDLMPE--RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFF-------S 129
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGA--HGFVIKRGFDSEVGVGNTLIDAYAR 235
E+ N FV +V V +CS + EG HG +K G S V NTL+ Y+
Sbjct: 130 GESRPNEFVATV----VFKSCS--NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSL 183
Query: 236 GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSA 295
+ +V D + D ++S ++ Y + G E LDV + V N LS+
Sbjct: 184 CSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSS 243
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
+ L ++L L L +H ++++ V ++I+MY KCG+V A++ F+ +N
Sbjct: 244 LRL-FSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQN 302
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
+ T ++ Y EAL+LF KM V PN TF +L++ + L+++G
Sbjct: 303 IFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG----- 357
Query: 416 TMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
+ H ++ G ++ +V++ ++G +++A GM + D V W +++ C
Sbjct: 358 DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSH 416
Query: 472 H 472
H
Sbjct: 417 H 417
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/523 (39%), Positives = 318/523 (60%), Gaps = 31/523 (5%)
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+ W +++ GY +D+ A+ L+K+ L CG + +S VL+AC
Sbjct: 31 NLFMWNTIIRGYSISDSPISAIALYKDMFL----CG--------ISPNSYTFGFVLNACC 78
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
++ + H ++K G D E + N LI YA G +D + +FD M E D+ +W++
Sbjct: 79 KLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSASWST 138
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+++ Y+QNG A E L + +M ++ +V +A TL++V+ LGVL LGK +H + K
Sbjct: 139 MVSGYSQNGQAVETLKLLREM-QAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKE 197
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
++ V++GT+++ MY KCG +D A K F M E++V +W+ MIAGY +H +AL LF
Sbjct: 198 GVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLF 257
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
M ++ + PN +TF SVLSA SH+GLV++G TM E+ I P ++HYGCMVDL R
Sbjct: 258 DAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCR 317
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
AG + A+ I+ M ++ + V+W +LLGAC+ H LGE ++K+ +L+P++ +V +
Sbjct: 318 AGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHISRKILKLDPSSPENYVFV 377
Query: 500 SNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYL 559
SN+YA+ GRW V + RSLMK + K G+S +E+ VH F++G++ HP+ EKIY L
Sbjct: 378 SNVYASLGRWSSVCQVRSLMKEKAPKKQHGWSSIEINFMVHKFIMGEESHPKREKIYGML 437
Query: 560 EELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NL 601
++ KL++VG+V V+HD+D+EEKE L +HSE+LA NL
Sbjct: 438 HQMARKLKQVGHVASTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNL 497
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
R C DCH VI+LIS+V +REI++RD FH+F++ CSC DYW
Sbjct: 498 RACRDCHEVIKLISEVYNREIILRDRVCFHHFRERGCSCNDYW 540
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 168/335 (50%), Gaps = 17/335 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N+F WN++I + + A+ + M ++P TF + +C L L G++ H
Sbjct: 31 NLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNACCKLLRLCEGQELH 90
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Q G + + + LI +Y+ CG + A +FDE+P+ + SW++M++GY QN
Sbjct: 91 SQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPE--PDSASWSTMVSGYSQNGQ 148
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
A E L L +E ++NV D+ +ASV+ C + V + + H ++ K
Sbjct: 149 AVETLKLLREM------------QAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDK 196
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
G +V +G L+ Y++ G +D + KVF GM E+D TW+ +IA YA +G +AL +
Sbjct: 197 EGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQL 256
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV-IKMDLEESVIVGTSIIDMY 335
FD M +S + N VT ++VL A +H G++ G I + + + + + ++D++
Sbjct: 257 FDAMKRSKIIP-NCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLF 315
Query: 336 CKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
C+ G V A K M E NV W ++ H
Sbjct: 316 CRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTH 350
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 6/273 (2%)
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
GHV + +F + WN+II Y+ + A+ ++ M + N+ T V
Sbjct: 15 GHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFL-CGISPNSYTFGFV 73
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A L L G+ +H Q++K L+ + +I +Y CG +D A F++M E +
Sbjct: 74 LNACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDS 133
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW+ M++GY + +A E L L +M V + T SV+ C G++ G W+++
Sbjct: 134 ASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLG-KWVHS 192
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
+ ++ V +V + + G L A + +GM + D W ++ IH + +
Sbjct: 193 YIDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGM-AERDVTTWSIMIAGYAIHGHDE 251
Query: 477 --LGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
L A K ++ PN + +LS Y+++G
Sbjct: 252 KALQLFDAMKRSKIIPNCVTFTSVLS-AYSHSG 283
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 23/246 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ + ++ SW+++++ ++ G +VE L+ M+ +++ T + C L
Sbjct: 124 MFDEMPEPDSA-SWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLG 182
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H G DV + +AL+ MYSKCG L +A K+F + + R++ +W+ M
Sbjct: 183 VLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAE--RDVTTWSIM 240
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + + +AL LF + + V SVLSA S +G+
Sbjct: 241 IAGYAIHGHDEKALQLFDAM------------KRSKIIPNCVTFTSVLSAYSH---SGLV 285
Query: 208 EGAHGFV----IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
E H + ++ ++D + R G V + K M IE + V W +++
Sbjct: 286 EKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLG 345
Query: 263 IYAQNG 268
+G
Sbjct: 346 ACKTHG 351
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 237/711 (33%), Positives = 380/711 (53%), Gaps = 116/711 (16%)
Query: 9 VSSVVSNVDKHSTNTNLTT-LFNKYVDKNNVFSWNSVIADLARGG-DSVEALRAFSSMRK 66
++S+V+ ++ H + LF++ + F +++ + +R G D F MR+
Sbjct: 39 LNSLVNCLEPHPLHLRYALHLFDRM--PPSTFLFDTALRACSRAGSDPHRPFLLFRRMRR 96
Query: 67 LSLTPTRSTF------------PCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSAL 114
+ P TF P ++ C+ LH A FVS++L
Sbjct: 97 AGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAA--------PFVSNSL 148
Query: 115 IDMYSKCGELSDARKLFDEIPQR-----------------------------IRNIVSWT 145
I MY + G +DAR+ FDEI + +R+++SWT
Sbjct: 149 IHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWT 208
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
S++ Y + + AREA+ FK L S + D V + +VLSAC+++
Sbjct: 209 SLIAAYSRANRAREAVGCFKTML------------SHGIAPDEVTVIAVLSACAKLKDLE 256
Query: 206 VTEGAHGFVIKRGFDSE--------------------------VGVG------NTLIDAY 233
+ H V ++G + +G G N +ID Y
Sbjct: 257 LGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGY 316
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ GHVDV+R +FD M +D +T+NS++ Y +G EAL +F M + D++ + T+
Sbjct: 317 CKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSM-RRHDLRVDNFTV 375
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
+L A A LG L+ G+ +H + + +E + +GT+++DMY KCG+VD A F +M +
Sbjct: 376 VNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGK 435
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
++V +WTAMIAG + + AL+ FY+M G +PN +++++VL+ACSH+ L+ EG +
Sbjct: 436 RDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLY 495
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
+ M +NI P +EHYGCM+DLLGR+G L EA DL++ M ++ + V+W S+L ACR+HK
Sbjct: 496 FDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHK 555
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
++DL + AA+ L +LEP+ G +V L NIY ++ +WE+ + R LM+ R++ KT G+S +
Sbjct: 556 HIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSI 615
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
+ G+VH F+V DK HP+ +I LEE++ +L+ +GY + + DVD+EEKE L
Sbjct: 616 TVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLA 675
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRD 626
HSEKLA NLRVC DCH+ I+LIS++ +REI+VRD
Sbjct: 676 HSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRD 726
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 271/436 (62%), Gaps = 19/436 (4%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
++ A A GG D +R++FDGM ++D V WN++IA Y G + EAL +FD+M +
Sbjct: 265 TAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEM-RHAGA 323
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
VTL + L A A LG L GK +H + SV +GT++IDMY KCG V A +
Sbjct: 324 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 383
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F+ M E+NV +WT+ ++G M+ R+ L LF +M GV PN +TFV VL CS AGL
Sbjct: 384 VFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGL 443
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V EG ++M I+P +EHYGCMVDL GRAG+L +A + I GM ++ VWG+LL
Sbjct: 444 VDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 503
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
A RIHKNV+LG+ A KL +E N HVLLSNIYA++ W+ V R++MK + + K
Sbjct: 504 NASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKK 563
Query: 527 TPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
PG S +E+ GKVH F VG K HP+H++I L E+N +L+ GY+ + V+ D+++E+
Sbjct: 564 VPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEED 623
Query: 587 KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSK 628
KE + +HSEKLA NLRVC DCH ++ISKV +REIV+RD
Sbjct: 624 KEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRN 683
Query: 629 RFHYFKDGLCSCGDYW 644
RFH+FKDG CSC DYW
Sbjct: 684 RFHHFKDGACSCKDYW 699
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 130/265 (49%), Gaps = 17/265 (6%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
DV +A++ + GE AR+LFD +PQR + V+W +M+ GYV +REAL LF E
Sbjct: 260 DVVCVTAMVGALATGGEADAARELFDGMPQR--DHVAWNAMIAGYVHTGRSREALRLFDE 317
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVG 226
G A V V + S L+AC+++ + H RG V +G
Sbjct: 318 M----RHAGAA--------VGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLG 365
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
LID Y++ G V + +VFD M E++ TW S ++ A NG+ + L +F +M +ST V
Sbjct: 366 TALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRM-ESTGV 424
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGK-CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLAR 345
+ N VT VL + G++ G+ C ++ + ++D+Y + G++D A
Sbjct: 425 EPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAV 484
Query: 346 KAFNQMK-EKNVRSWTAMIAGYGMH 369
N M E + W A++ +H
Sbjct: 485 NFINGMPLEPHEGVWGALLNASRIH 509
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 110/238 (46%), Gaps = 21/238 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+ +++V +WN++IA G S EALR F MR T A+ +C+ L
Sbjct: 283 LFDGMPQRDHV-AWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLG 341
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK H A G V + +ALIDMYSKCG ++ A ++FD + + RN+ +WTS
Sbjct: 342 ALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGE--RNVYTWTSA 399
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G N R+ L LFK S V + V VL CS + V
Sbjct: 400 VSGLAMNGMGRDCLALFKRM------------ESTGVEPNGVTFVVVLRGCSMAGL--VD 445
Query: 208 EGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
EG F + G D + ++D Y R G +D + +GM +E W +++
Sbjct: 446 EGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 503
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V+ T+++ G+ D AR+ F+ M +++ +W AMIAGY R+REAL LF +M
Sbjct: 261 VVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 320
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
AG +T VS L+AC+ G ++ G W+++ H + V ++D+ + G +
Sbjct: 321 AGAAVGEVTLVSALTACAQLGALERG-KWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 379
Query: 445 EAYDLIEGM 453
A ++ + M
Sbjct: 380 AAMEVFDSM 388
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/446 (44%), Positives = 284/446 (63%), Gaps = 27/446 (6%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG--------LAAEALDV 276
V L++ YA+ G V R +F+ + + D +WNSI++ Y N L+ E L +
Sbjct: 146 VQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTL 205
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F +M KS +K N VTL A++ A A LG L G H V+K +L+ + VGT++IDMY
Sbjct: 206 FIEMQKSL-IKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYS 264
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG +DLA + F+Q+ ++ + AMI G+ +H +ALDLF KM G+ P+ +T V
Sbjct: 265 KCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVV 324
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+ +CSH GLV+EG +M + +EP +EHYGC+VDLLGRAG+L+EA + + M +K
Sbjct: 325 TMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMK 384
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
+ V+W SLLGA R+H N+++GE+ K L +LEP G +VLLSN+YA+ RW+DV+R R
Sbjct: 385 PNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVR 444
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
LMK+ + K PG SLVE+ G +H FL+GDK HP+ ++IY LEE++ +L E G+
Sbjct: 445 KLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRTL 504
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V+ D+++EEKE L HSE+LA NLRVCGDCHT +LISK+
Sbjct: 505 EVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIY 564
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
+REI+VRD RFH+FK+G CSC DYW
Sbjct: 565 EREIIVRDRNRFHHFKEGACSCSDYW 590
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 172/360 (47%), Gaps = 29/360 (8%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS--MRKLSLTPTRSTFPCAI 80
T+ ++FN ++ +F +N++I+ LA + S + +L P TFP
Sbjct: 57 THALSIFN-HIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLF 115
Query: 81 KSCSALHDLHSGKQAHQQAFIFGFHR-DVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
K+C + L G+ H F D FV +AL++ Y+KCG++ R LF++I +
Sbjct: 116 KACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKP-- 173
Query: 140 NIVSWTSMLTGYVQNDNA--------REALLLFKEFLLEESECGGASENSDNVFVDSVAI 191
++ SW S+L+ YV N A E L LF E + + V +
Sbjct: 174 DLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEM------------QKSLIKANEVTL 221
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
+++SAC+ + AH +V+K VG LID Y++ G +D++ ++FD +
Sbjct: 222 VALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPH 281
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
+D + +N++I +A +G +ALD+F +M + + VTL + + +H+G++ G
Sbjct: 282 RDTLCYNAMIGGFAIHGYGHQALDLFKKMTLE-GLAPDDVTLVVTMCSCSHVGLVEEGCD 340
Query: 312 IHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLA-RKAFNQMKEKNVRSWTAMIAGYGMH 369
+ + + ++ +E + ++D+ + G++ A + N + N W +++ +H
Sbjct: 341 VFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVH 400
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/555 (37%), Positives = 323/555 (58%), Gaps = 24/555 (4%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++F+ + NVF++N++I+ G E + MR + P + TFPCAIK+C
Sbjct: 13 SIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACL-- 70
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D+ K+ H F FG DVF+ SAL++ Y K G + A+ F+E+P IR++V W +
Sbjct: 71 -DVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELP--IRDVVLWNA 127
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ GY Q L F+ N ++V + +LS + +
Sbjct: 128 MVNGYAQIGQFEMVLETFRRM------------NDESVVPSRFTVTGILSVFAVMGDLNN 175
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
HGF +K G+DS V V N+LID Y + ++ + ++F+ M EKD +WNSI +++ Q
Sbjct: 176 GRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQ 235
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE---- 322
G L + D+M+ ++ + VT++ VL A +HL L G+ IH +I L
Sbjct: 236 CGDHDGTLRLLDRML-GAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGK 294
Query: 323 --ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
+ V++ ++IDMY KCG + A F +M K+V SW MI GYGMH EAL++F
Sbjct: 295 DIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFS 354
Query: 381 KMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRA 440
+M + ++P+ +TFV VLSACSHAG V +G ++L M ++++ P +EHY C++D+LGRA
Sbjct: 355 RMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRA 414
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLS 500
G+L EAY+L M ++A+ VVW +LL ACR+HK+ L E+AA+++FELEP +CG +VL+S
Sbjct: 415 GQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMS 474
Query: 501 NIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLE 560
N+Y GR+E+V R M+ + + KTPG S +EL+ VH F+ D+ HP+ IY L
Sbjct: 475 NVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLN 534
Query: 561 ELNVKLQEVGYVTDM 575
L +L E GYV D+
Sbjct: 535 SLTARLCEHGYVPDV 549
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 178/361 (49%), Gaps = 23/361 (6%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MYSKC +++ A +F + P N+ ++ ++++G++ N E +++
Sbjct: 1 MYSKCNQMNFALSIFSD-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKM--------- 50
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
++ V D + AC V + HG + K G + +V +G+ L++ Y +
Sbjct: 51 ---RNEGVMPDKFTFPCAIKACLDVL---EIKKIHGLLFKFGLELDVFIGSALVNCYLKF 104
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G ++ ++ F+ + +D V WN+++ YAQ G L+ F +M + V + T++ +
Sbjct: 105 GLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVP-SRFTVTGI 163
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A +G L G+ IH +KM + V V S+IDMY KC ++ A + F M+EK++
Sbjct: 164 LSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDI 223
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH-AGLVQ----EGW 411
SW ++ + + L L +M+ AG++P+ +T +VL ACSH A L+ G+
Sbjct: 224 FSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGY 283
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
++ +G + V ++D+ + G +++A+ + E M K D W ++ +
Sbjct: 284 MIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNK-DVASWNIMIMGYGM 342
Query: 472 H 472
H
Sbjct: 343 H 343
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 300/485 (61%), Gaps = 22/485 (4%)
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
S NV + SV+ +C+ ++ + +G H + GF + V L+ Y++ G ++
Sbjct: 100 SSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDME 159
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+R+VFD M EK V WNS+++ + QNGLA +A+ VF QM + + + ++ T ++L A
Sbjct: 160 AARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQM-RESGFEPDSATFVSLLSAC 218
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
A G + LG +H ++ L+ +V +GT++I++Y +CG V AR+ F++MKE NV +WT
Sbjct: 219 AQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWT 278
Query: 361 AMIAGYGMHCRAREALDLFYKMIK-AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
AMI+ YG H ++A+DLF KM G PN +TFV+VLSAC+HAGLV++G M
Sbjct: 279 AMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSVYKRMTE 338
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV---VWGSLLGACRIHKNVD 476
+ + PGVEH+ C+VD+LGRAG L EAY I+ + + +W ++LGAC++H+N D
Sbjct: 339 SYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATAPALWTAMLGACKMHRNYD 398
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
LG AK+L LEP N G+HV+LSNIYA +G+ ++V R M L K G+S++E+
Sbjct: 399 LGVEIAKRLIALEPENPGHHVMLSNIYALSGKTDEVSHIRDRMMRNNLRKQVGYSIIEVE 458
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
K + F +GD+ H + +IY YLE L + +E+GY V+H V++EEKE LR HSE
Sbjct: 459 NKTYLFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSE 518
Query: 597 KLA-----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
KLA NLR+C DCH+ + IS V +R+I+VRD RFH+F++G CS
Sbjct: 519 KLAVAFGLLKTVDSAITVVKNLRICEDCHSAFKYISIVSNRQIIVRDKLRFHHFQNGSCS 578
Query: 640 CGDYW 644
C DYW
Sbjct: 579 CLDYW 583
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 175/339 (51%), Gaps = 25/339 (7%)
Query: 39 FSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQ 98
F +NSVI ++ + + + M +++P+ TF IKSC+ L L GK H
Sbjct: 73 FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCH 132
Query: 99 AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR 158
A + GF D +V +AL+ YSKCG++ AR++FD +P+ +++V+W S+++G+ QN A
Sbjct: 133 AVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPE--KSVVAWNSLVSGFEQNGLAE 190
Query: 159 EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG 218
+A+ +F + + ES DS S+LSAC++ + H +++ G
Sbjct: 191 DAIRVF--YQMRES----------GFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEG 238
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
D V +G LI+ Y+R G V +R+VFD M E + W ++I+ Y +G +A+D+F+
Sbjct: 239 LDVNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFN 298
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS----IIDM 334
+M N VT AVL A AH G++ G+ ++ +M +I G I+DM
Sbjct: 299 KMEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSVYK---RMTESYRLIPGVEHHVCIVDM 355
Query: 335 YCKCGQVDLARKAFNQMKEKNVRS----WTAMIAGYGMH 369
+ G +D A + Q+ + WTAM+ MH
Sbjct: 356 LGRAGFLDEAYRFIQQLDATGNATAPALWTAMLGACKMH 394
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 113/218 (51%), Gaps = 23/218 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +K+ V +WNS+++ + G + +A+R F MR+ P +TF + +C+
Sbjct: 164 VFDRMPEKS-VVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTG 222
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G HQ G +V + +ALI++YS+CG++ AR++FD++ + N+ +WT+M
Sbjct: 223 AISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMKE--TNVAAWTAM 280
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ Y + ++A+ LF + E +CG N V +VLSAC+ G+
Sbjct: 281 ISAYGTHGYGKQAVDLFNKM---EDDCGSIPNN--------VTFVAVLSACAHA---GLV 326
Query: 208 EGAHGFVIKRGFDSE---VGVGN--TLIDAYARGGHVD 240
E V KR +S GV + ++D R G +D
Sbjct: 327 EDGRS-VYKRMTESYRLIPGVEHHVCIVDMLGRAGFLD 363
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/550 (38%), Positives = 333/550 (60%), Gaps = 17/550 (3%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
+SS V K + + LF++ +++ V SWN+VI+ + G +AL F M+
Sbjct: 336 MSSAVGMYAKCNVFEDAIKLFDEMPERD-VASWNNVISCYYQDGQPEKALELFEEMKVSG 394
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
P T I SC+ L DL GK+ H + GF D FVSSAL+DMY KCG L A+
Sbjct: 395 FKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAK 454
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
++F++I QR +N+VSW SM+ GY +++ + LF+ + + +
Sbjct: 455 EVFEQI-QR-KNVVSWNSMIAGYSLKGDSKSCIELFRRM------------DEEGIRPTL 500
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
++S+L ACSR + + HG++I+ ++++ V ++LID Y + G++ + VF
Sbjct: 501 TTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQN 560
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M + + V+WN +I+ Y + G EAL +F M K+ VK +A+T ++VL A + L VL
Sbjct: 561 MPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKA-GVKPDAITFTSVLPACSQLAVLEK 619
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK IH+ +I+ LE + +V +++DMY KCG VD A FNQ+ E++ SWT+MIA YG
Sbjct: 620 GKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGS 679
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H +A EAL LF KM ++ +P+ +TF+++LSACSHAGLV EG ++ N M E+ +P VE
Sbjct: 680 HGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVE 739
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMK-VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
HY C++DLLGR G+L+EAY++++ ++ D + +L AC +HK +DLGE + L E
Sbjct: 740 HYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIE 799
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
+P++ +++LSN+YA+ +W++V + R +K L K PG S +E+ ++H F+V DK
Sbjct: 800 KDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDK 859
Query: 548 EHPQHEKIYE 557
HPQ + IYE
Sbjct: 860 SHPQADMIYE 869
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/465 (32%), Positives = 243/465 (52%), Gaps = 30/465 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSAL 86
+F + ++ WN ++A + +E L F + L P T+P +K+CS L
Sbjct: 252 VFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGL 311
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ GK H GF DV V S+ + MY+KC DA KLFDE+P+ R++ SW +
Sbjct: 312 GRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPE--RDVASWNN 369
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+++ Y Q+ +AL LF EE + G DSV + +V+S+C+R+
Sbjct: 370 VISCYYQDGQPEKALELF-----EEMKVSGFKP-------DSVTLTTVISSCARLLDLER 417
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H +++ GF + V + L+D Y + G ++++++VF+ + K+ V+WNS+IA Y+
Sbjct: 418 GKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSL 477
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
G + +++F +M ++ TLS++L+A + L+LGK IH +I+ +E +
Sbjct: 478 KGDSKSCIELFRRM-DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIF 536
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V +S+ID+Y KCG + A F M + NV SW MI+GY EAL +F M KAG
Sbjct: 537 VNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAG 596
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGK 442
V+P+ ITF SVL ACS ++++G H F IE +E G ++D+ + G
Sbjct: 597 VKPDAITFTSVLPACSQLAVLEKGKEI-----HNFIIESKLEINEVVMGALLDMYAKCGA 651
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
+ EA + + + DFV W S++ A H A KLFE
Sbjct: 652 VDEALHIFNQLPER-DFVSWTSMIAAYGSHGQA----FEALKLFE 691
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 203/387 (52%), Gaps = 16/387 (4%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+ + SAL +L GK HQ+ G ++ + +LI++Y C A+ +F I +
Sbjct: 203 VTAGSALEEL-LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL- 260
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+I W ++ +N E L +F L + + D+ SVL ACS
Sbjct: 261 DITLWNGLMAACTKNFIFIEGLEVFHRLL-----------HFPYLKPDAFTYPSVLKACS 309
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ G + H VIK GF +V V ++ + YA+ + + K+FD M E+D +WN+
Sbjct: 310 GLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNN 369
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+I+ Y Q+G +AL++F++M K + K ++VTL+ V+ + A L L GK IH ++++
Sbjct: 370 VISCYYQDGQPEKALELFEEM-KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRS 428
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
V ++++DMY KCG +++A++ F Q++ KNV SW +MIAGY + ++ ++LF
Sbjct: 429 GFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELF 488
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
+M + G+RP T S+L ACS + +Q G +++ +E + ++DL +
Sbjct: 489 RRMDEEGIRPTLTTLSSILMACSRSVNLQLG-KFIHGYIIRNRVEADIFVNSSLIDLYFK 547
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLL 466
G + A ++ + M K + V W ++
Sbjct: 548 CGNIGSAENVFQNMP-KTNVVSWNVMI 573
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/615 (36%), Positives = 339/615 (55%), Gaps = 34/615 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN V K+ V W ++++ + A R FS MR P +K+ L
Sbjct: 219 VFNGIVRKDAVV-WTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLP 277
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ GK H A + V AL+DMY+KCG++ DAR F+ IP +++ + M
Sbjct: 278 SVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYD--DVILLSFM 335
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ Y Q++ +A LF + +V + +++SVL AC+ +
Sbjct: 336 ISRYAQSNQNEQAFELFLRLM------------RSSVLPNEYSLSSVLQACTNMVQLDFG 383
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H IK G +S++ VGN L+D YA+ +D S K+F + + + V+WN+I+ ++Q+
Sbjct: 384 KQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQS 443
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL EAL VF +M ++ + C VT S+VL A A +R IH + K ++
Sbjct: 444 GLGEEALSVFCEM-QAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVI 502
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G S+ID Y KCG + A K F + E+++ SW A+I+GY +H +A +AL+LF +M K+ V
Sbjct: 503 GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNV 562
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
N ITFV++LS CS GLV G ++M + I+P +EHY C+V LLGRAG+L +A
Sbjct: 563 ESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDAL 622
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
I + +VW +LL +C IHKNV LG +A+K+ E+EP + +VLLSN+YA AG
Sbjct: 623 QFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAG 682
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+ V R M+N + K PG S VE++G++HAF VG +HP I LE LN+K
Sbjct: 683 SLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTS 742
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
GY+ D+ V+HDVD+E+K L +HSE+LA NLR C DCHT
Sbjct: 743 REGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHT 802
Query: 610 VIRLISKVVDREIVV 624
+ISK+V REI+V
Sbjct: 803 AFTVISKIVKREIIV 817
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 200/413 (48%), Gaps = 27/413 (6%)
Query: 61 FSSMRKLSLTPTRSTFPCA--IKSCSALHDLHSGKQAHQQAFIFGF--HRDVFVSSALID 116
+S+ L P +F CA ++ C A D G+ H G D+F ++ L++
Sbjct: 45 LTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLN 104
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY K G L+ AR+LFD +P+R N+VS+ +++ + Q + A LF+ E E
Sbjct: 105 MYGKLGPLASARRLFDRMPER--NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE--- 159
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
V+ + ++L + G+ G H K G D VG+ LIDAY+
Sbjct: 160 ---------VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLC 210
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
V + VF+G++ KDAV W ++++ Y++N A VF +M + + K N L++V
Sbjct: 211 SLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKM-RVSGCKPNPFALTSV 269
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A L + LGK IH IK + VG +++DMY KCG + AR AF + +V
Sbjct: 270 LKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDV 329
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN- 415
+ MI+ Y + +A +LF +++++ V PN + SVL AC++ + G N
Sbjct: 330 ILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNH 389
Query: 416 --TMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+GHE ++ G ++D + + + + ++ A+ V W +++
Sbjct: 390 AIKIGHESDLFVG----NALMDFYAKCNDMDSSLKIFSSLR-DANEVSWNTIV 437
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/606 (37%), Positives = 337/606 (55%), Gaps = 51/606 (8%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++C AL L +Q H A G D F ++ L+ Y+ G+L+ AR+LF+ IP+R
Sbjct: 51 FRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRR-- 105
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECG------------GASENSDNVFVD 187
N++SW + GY++N + A LF E + E G E S F+D
Sbjct: 106 NVMSWNILFGGYIKNGDLGGARKLFDE--MPERNVATWNAMVAGLTNLGFDEESLGFFLD 163
Query: 188 ---------SVAIASVLSACS--RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
+ SV C+ R V G H +V++ G D ++ VG++L Y R
Sbjct: 164 MRREGMHPDEFGLGSVFRCCAGLRDVVTG--RQVHAYVVRSGLDRDMCVGSSLAHMYMRC 221
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G + V + V+ N+IIA QNG + AL+ F M++S V + VT +
Sbjct: 222 GCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYF-CMMRSVGVAADVVTFVSA 280
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
+ + + L L G+ IH QV+K +++ V V T ++ MY +CG + + + F +
Sbjct: 281 ISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDT 340
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+AMI+ YG H ++A++LF +M+ G P+ +TF+++L ACSH+GL +EG
Sbjct: 341 FLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFEL 400
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M + ++P V+HY C+VDLLGR+G L EA LI M + D V+W +LL AC+ KN D
Sbjct: 401 MTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFD 460
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
+ E AK++ EL+P++ +VLLSNI A + RW DV R M++ + K PG S VEL+
Sbjct: 461 MAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELK 520
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
G +H F GD+ HP+ ++I E LEE+ K+++ GY DM+ V+HD++ EEKE++L HSE
Sbjct: 521 GHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSE 580
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
KLA NLRVC DCH I+L+S+V REIVVRD RFH+FKDG C
Sbjct: 581 KLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRC 640
Query: 639 SCGDYW 644
SC DYW
Sbjct: 641 SCRDYW 646
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 164/359 (45%), Gaps = 22/359 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ ++N V +WN+++A L G E+L F MR+ + P + C+ L
Sbjct: 129 LFDEMPERN-VATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLR 187
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D+ +G+Q H G RD+ V S+L MY +CG L + + +P +IVS ++
Sbjct: 188 DVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPS--LSIVSCNTI 245
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G QN ++ AL F S V D V S +S+CS +
Sbjct: 246 IAGRTQNGDSEGALEYF------------CMMRSVGVAADVVTFVSAISSCSDLAALAQG 293
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG V+K G D V V L+ Y+R G + S +VF G D +++I+ Y +
Sbjct: 294 QQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFH 353
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESVI 326
G +A+++F QM+ + + VT A+L A +H G+ G C ++ SV
Sbjct: 354 GHGQKAIELFKQMMNG-GAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVK 412
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
T ++D+ + G +D A M + W +++ C+ ++ D+ ++ K
Sbjct: 413 HYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA----CKTQKNFDMAERIAK 467
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/628 (35%), Positives = 347/628 (55%), Gaps = 75/628 (11%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAF-SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
+ F +N+++ + + ++ F MRK + P +F +K+ + L +G Q
Sbjct: 236 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQM 295
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H QA G +FV++ LI MY +CG + ARK+FDE+PQ N+V+W +++T + +
Sbjct: 296 HCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQP--NLVAWNAVVTACFRGN 353
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+ GA E D + V
Sbjct: 354 DV-----------------SGAREIFDKMLV----------------------------- 367
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
R S N ++ Y + G ++ ++++F M +D V+W+++I ++ NG E+
Sbjct: 368 -RNHTS----WNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFS 422
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
F +++++ +++ N V+L+ VL A + G GK +H V K V V ++IDMY
Sbjct: 423 YFRELLRA-EMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMY 481
Query: 336 CKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITF 394
+CG V +AR F M+EK ++ SWT+MIAG MH EA+ +F +M ++GV P+ I+F
Sbjct: 482 SRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISF 541
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
+S+L ACSHAGL++EG + + M ++IEP VEHYGCMVDL GR+GKL++AY I M
Sbjct: 542 ISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMP 601
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVER 514
+ +VW +LLGAC H N++L E ++L EL+PNN G VLLSN+YA AG+W+DV
Sbjct: 602 IPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWKDVAS 661
Query: 515 TRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ-EVGYVT 573
R M +R+ K +SLVE+ ++ F +K+ + +E L+E+ ++L+ E GY
Sbjct: 662 IRKSMIVQRIKKITAWSLVEVGKTMYKFTACEKKKEIDIEAHEKLKEIILRLRDEAGYAP 721
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEK------------------LANLRVCGDCHTVIRLIS 615
++ S ++DV++EEKE + HSEK + NLR+C DCH V++L S
Sbjct: 722 EVASALYDVEEEEKEDQVSKHSEKLALAFALARLPKGANIRIVKNLRICRDCHAVMKLTS 781
Query: 616 KVVDREIVVRDSKRFHYFKDGLCSCGDY 643
+V EIV+RD RFH FKDG CSCGDY
Sbjct: 782 RVYGVEIVIRDRNRFHSFKDGSCSCGDY 809
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 142/330 (43%), Gaps = 73/330 (22%)
Query: 211 HGFVIKRGFDSEVGVGNTLID--AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
HGF IK G D++ LI A + + +R++ E DA +N+++ Y+++
Sbjct: 192 HGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESD 251
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
++ VF +M++ + ++ + + V+ A A+ LR G +H Q +K L+ + V
Sbjct: 252 EPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALKHGLDSHLFVA 311
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNV-------------------------------R 357
T++I MY +CG V ARK F++M + N+
Sbjct: 312 TTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAREIFDKMLVRNHT 371
Query: 358 SWTAMIAGY----GMHCRAR---------------------------EALDLFYKMIKAG 386
SW M+AGY + C R E+ F ++++A
Sbjct: 372 SWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAE 431
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYGCMVDLLGRAGK 442
+RPN ++ VLSACS +G + G T+ H F + G V ++D+ R G
Sbjct: 432 MRPNEVSLTGVLSACSQSGAFEFG----KTL-HGFVEKSGYSWIVSVNNALIDMYSRCGN 486
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
+ A + EGM+ K V W S++ +H
Sbjct: 487 VPMARLVFEGMQEKRSIVSWTSMIAGLAMH 516
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F +K ++ SW S+IA LA G EA+R F+ M + + P +F + +CS
Sbjct: 493 VFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACS--- 549
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSA------LIDMYSKCGELSDARKLFDEIPQRIRNI 141
H+G + + R + A ++D+Y + G+L A ++P I
Sbjct: 550 --HAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAI 607
Query: 142 VSWTSML 148
V W ++L
Sbjct: 608 V-WRTLL 613
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 240/653 (36%), Positives = 350/653 (53%), Gaps = 98/653 (15%)
Query: 59 RAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMY 118
R +S+ +K + F +++SC +++ + KQ H G ++ L+ +
Sbjct: 3 RCYSTFKKPLNSNQLQLF--SLESCKSMNQI---KQTHAHLITTGLILHPITANKLLKVL 57
Query: 119 --SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
S G LS A +LFD+IP + + ++ + +
Sbjct: 58 IASSFGSLSYAHQLFDQIP----------------------KPDVFIYNTMIKAHAVIPT 95
Query: 177 ASENSDNVFVDSVAIAS----------VLSACSRVTVNGVTEGAHGFV--IKRGFDSEVG 224
+S NS +F+ V ++ V AC GV EG V IK G +S +
Sbjct: 96 SSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGL--GVLEGEQIRVHAIKIGLESNLF 153
Query: 225 VGNTLIDAYARGGHVDVSRKVFD-------------------------------GMIEKD 253
V N +I YA G VD +R+VFD M E+D
Sbjct: 154 VTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERD 213
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH 313
V+W +IIA Y Q G EALD+F +M++ T N TL++ L A A+L L G+ IH
Sbjct: 214 VVSWTTIIAGYVQVGCFKEALDLFHEMLQ-TGPPPNEFTLASALAACANLVALDQGRWIH 272
Query: 314 DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ---MKEKNVRSWTAMIAGYGMHC 370
+ K +++ + + S++DMY KCG++D A K F+ +K K V W AMI GY MH
Sbjct: 273 VYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK-VWPWNAMIGGYAMHG 331
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
+++EA+DLF +M V PN +TFV++L+ACSH LV+EG + +M + IEP +EHY
Sbjct: 332 KSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHY 391
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
GCMVDLLGR+G LKEA + + M + D +WG+LLGACRIHK+++ G+ K + EL+
Sbjct: 392 GCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDS 451
Query: 491 NNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHP 550
++ G HVLL+N+Y+ +G+W++ + R ++ KTPG S +EL G H FLVGD+ HP
Sbjct: 452 DHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHP 511
Query: 551 QHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE-KEMTLRIHSEKLA---------- 599
Q +++Y +L+E+ KL+ GYV + V+ D+D EE KE L HSEKLA
Sbjct: 512 QTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPP 571
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + ISKV REI+VRD R+H+FKDG CSC DYW
Sbjct: 572 GTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 624
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 173/379 (45%), Gaps = 53/379 (13%)
Query: 28 LFNKYVDKNNVFSWNSVI-ADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSA 85
LF++ + K +VF +N++I A S ++R F SM ++S P R TF K+C
Sbjct: 71 LFDQ-IPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGN 129
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK------------------------- 120
+ G+Q A G ++FV++A+I MY+
Sbjct: 130 GLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIM 189
Query: 121 ------CGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESEC 174
GE+ A+++FDE+ + R++VSWT+++ GYVQ +EAL LF E L
Sbjct: 190 IGGYVGSGEIGRAKEMFDEMSE--RDVVSWTTIIAGYVQVGCFKEALDLFHEMLQT---- 243
Query: 175 GGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYA 234
G N +AS L+AC+ + H ++ K + +L+D YA
Sbjct: 244 -GPPPN-------EFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYA 295
Query: 235 RGGHVDVSRKVF--DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
+ G +D + KVF + ++ WN++I YA +G + EA+D+F+QM K V N VT
Sbjct: 296 KCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQM-KVEKVSPNKVT 354
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESVIVGTSIIDMYCKCGQVDLARKA-FNQ 350
A+L A +H ++ G+ + +E + ++D+ + G + A + FN
Sbjct: 355 FVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNM 414
Query: 351 MKEKNVRSWTAMIAGYGMH 369
+ W A++ +H
Sbjct: 415 PMAPDATIWGALLGACRIH 433
>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g04780-like [Glycine max]
Length = 632
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/578 (38%), Positives = 324/578 (56%), Gaps = 41/578 (7%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ H Q G D+ S+ LI+MYSKC + RK DE+ +++++ + +
Sbjct: 69 GRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEM--LVKSLILXNTRIGAL 126
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
QN R+AL L E + + I+SVL C+ H
Sbjct: 127 TQNAEDRKALKLLIRMQREVTP------------FNEFTISSVLCNCAFKCAILECMQLH 174
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
F IK DS V L+ YA+ + + ++F+ M EK+AVTW+S++A Y QNG
Sbjct: 175 AFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHD 234
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EAL +F + + +S+ + A A L L GK +H K ++ V +S+
Sbjct: 235 EALLLFHN-AQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSL 293
Query: 332 IDMYCKCGQVDLARKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
IDMY KCG + A F E +++ W AMI+G+ H A+EA+ LF KM + G P+
Sbjct: 294 IDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPD 353
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+T+VSVL+ACSH GL +EG + + M + N+ P V HY CM+D+LGRAG +++AYDLI
Sbjct: 354 DVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKAYDLI 413
Query: 451 EGMKVKADFVVWGSLLG-------ACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
M A +WGS+ G +CRI+ N++ EIAAK LFE+EPNN G H+LL+NIY
Sbjct: 414 GRMSFNATSSMWGSVRGLSXLIKASCRIYGNIEFAEIAAKHLFEMEPNNAGNHILLANIY 473
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
A + ++V R R L++ + K G S +E++ K+H+F VG++ HPQ + Y L+ L
Sbjct: 474 AANKKSDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDNYAKLDNLV 533
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
V+L+++ Y D + +HDV++ K M L HSEKLA NLR+CG
Sbjct: 534 VELKKLNYKVDTNNDLHDVEESRKHMLLGHHSEKLAITFGLVCLPTEIPIRIIKNLRICG 593
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
DCHT ++L+SK REI+VRD+ RFH+FKDGLCSCG++
Sbjct: 594 DCHTFMKLVSKFASREIIVRDTNRFHHFKDGLCSCGEF 631
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 172/333 (51%), Gaps = 40/333 (12%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTP----------TRSTFPCAIKSCSALHDLHS 91
N+ I L + + +AL+ M++ +TP F CAI C LH S
Sbjct: 120 NTRIGALTQNAEDRKALKLLIRMQR-EVTPFNEFTISSVLCNCAFKCAILECMQLHAF-S 177
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K A + FV +AL+ +Y+KC + DA ++F+ +P+ +N V+W+SM+ GY
Sbjct: 178 IKAA--------IDSNCFVXTALLHVYAKCSSIKDASQMFESMPE--KNAVTWSSMMAGY 227
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
VQN EALLLF ++ G + D I+S +SAC+ + + H
Sbjct: 228 VQNGFHDEALLLF-----HNAQLMGFDQ-------DPFNISSAVSACAGLATLVEGKQVH 275
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE-KDAVTWNSIIAIYAQNGLA 270
K GF S + V ++LID YA+ G + + VF+G +E + V WN++I+ +A++ LA
Sbjct: 276 AMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALA 335
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGT 329
EA+ +F++M + + VT +VL A +H+G+ G+ D +++ +L SV+ +
Sbjct: 336 QEAMILFEKM-QQRGFFPDDVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYS 394
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
+ID+ G+ L +KA++ + + + ++M
Sbjct: 395 CMIDIL---GRAGLVQKAYDLIGRMSFNATSSM 424
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 171/383 (44%), Gaps = 16/383 (4%)
Query: 142 VSWT-SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF-VDSVA-IASVLSAC 198
VSW S L G + R+ ++ SE S +NV +D V+ + +L C
Sbjct: 9 VSWKWSKLKGPMMPKGPRKLSVI--------SEAKPESSKVENVVHMDRVSNLHYLLQLC 60
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
++ + H +I+ G + ++ LI+ Y++ V +RK D M+ K + N
Sbjct: 61 AKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILXN 120
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
+ I QN +AL + +M + N T+S+VL A + +H IK
Sbjct: 121 TRIGALTQNAEDRKALKLLIRMQREV-TPFNEFTISSVLCNCAFKCAILECMQLHAFSIK 179
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
++ + V T+++ +Y KC + A + F M EKN +W++M+AGY + EAL L
Sbjct: 180 AAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLL 239
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
F+ G + S +SAC+ + EG ++ M H+ + ++D+
Sbjct: 240 FHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQ-VHAMSHKSGFGSNIYVASSLIDMYA 298
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--LEPNNCGYH 496
+ G ++EAY + EG V+W +++ H I +K+ + P++ Y
Sbjct: 299 KCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTY- 357
Query: 497 VLLSNIYANAGRWEDVERTRSLM 519
V + N ++ G E+ ++ LM
Sbjct: 358 VSVLNACSHMGLHEEGQKYFDLM 380
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 26/250 (10%)
Query: 18 KHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP 77
K S+ + + +F +KN V +W+S++A + G EAL F + + +
Sbjct: 198 KCSSIKDASQMFESMPEKNAV-TWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQDPFNIS 256
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
A+ +C+ L L GKQ H + GF +++V+S+LIDMY+KCG + +A +F+ +
Sbjct: 257 SAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFVE- 315
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+R+IV W +M++G+ ++ A+EA++LF++ F D V SVL+A
Sbjct: 316 VRSIVLWNAMISGFARHALAQEAMILFEKM------------QQRGFFPDDVTYVSVLNA 363
Query: 198 CSRVTVNGVTEGAHGF---VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD--GMIEK 252
CS + ++ EG F V + V + +ID R G V +K +D G +
Sbjct: 364 CSHMGLH--EEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLV---QKAYDLIGRMSF 418
Query: 253 DAVT--WNSI 260
+A + W S+
Sbjct: 419 NATSSMWGSV 428
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/550 (38%), Positives = 333/550 (60%), Gaps = 17/550 (3%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
+SS V K + + LF++ +++ V SWN+VI+ + G +AL F M+
Sbjct: 144 MSSAVGMYAKCNVFEDAIKLFDEMPERD-VASWNNVISCYYQDGQPEKALELFEEMKVSG 202
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
P T I SC+ L DL GK+ H + GF D FVSSAL+DMY KCG L A+
Sbjct: 203 FKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAK 262
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
++F++I QR +N+VSW SM+ GY +++ + LF+ + + +
Sbjct: 263 EVFEQI-QR-KNVVSWNSMIAGYSLKGDSKSCIELFRRM------------DEEGIRPTL 308
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
++S+L ACSR + + HG++I+ ++++ V ++LID Y + G++ + VF
Sbjct: 309 TTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQN 368
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M + + V+WN +I+ Y + G EAL +F M K+ VK +A+T ++VL A + L VL
Sbjct: 369 MPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKA-GVKPDAITFTSVLPACSQLAVLEK 427
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK IH+ +I+ LE + +V +++DMY KCG VD A FNQ+ E++ SWT+MIA YG
Sbjct: 428 GKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGS 487
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
H +A EAL LF KM ++ +P+ +TF+++LSACSHAGLV EG ++ N M E+ +P VE
Sbjct: 488 HGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVE 547
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMK-VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
HY C++DLLGR G+L+EAY++++ ++ D + +L AC +HK +DLGE + L E
Sbjct: 548 HYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIE 607
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
+P++ +++LSN+YA+ +W++V + R +K L K PG S +E+ ++H F+V DK
Sbjct: 608 KDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDK 667
Query: 548 EHPQHEKIYE 557
HPQ + IYE
Sbjct: 668 SHPQADMIYE 677
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 238/452 (52%), Gaps = 30/452 (6%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
WN ++A + +E L F + L P T+P +K+CS L + GK H
Sbjct: 73 WNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHV 132
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
GF DV V S+ + MY+KC DA KLFDE+P+ R++ SW ++++ Y Q+ +
Sbjct: 133 IKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPE--RDVASWNNVISCYYQDGQPEK 190
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
AL LF EE + G DSV + +V+S+C+R+ + H +++ GF
Sbjct: 191 ALELF-----EEMKVSGFKP-------DSVTLTTVISSCARLLDLERGKEIHMELVRSGF 238
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+ V + L+D Y + G ++++++VF+ + K+ V+WNS+IA Y+ G + +++F +
Sbjct: 239 ALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRR 298
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M ++ TLS++L+A + L+LGK IH +I+ +E + V +S+ID+Y KCG
Sbjct: 299 M-DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCG 357
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+ A F M + NV SW MI+GY EAL +F M KAGV+P+ ITF SVL
Sbjct: 358 NIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLP 417
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKV 455
ACS ++++G H F IE +E G ++D+ + G + EA + +
Sbjct: 418 ACSQLAVLEKGKEI-----HNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPE 472
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
+ DFV W S++ A H A KLFE
Sbjct: 473 R-DFVSWTSMIAAYGSHGQA----FEALKLFE 499
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 201/387 (51%), Gaps = 15/387 (3%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+K+C L GK HQ+ G ++ + +LI++Y C A+ +F I +
Sbjct: 10 LKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL- 68
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+I W ++ +N E L +F L + + D+ SVL ACS
Sbjct: 69 DITLWNGLMAACTKNFIFIEGLEVFHRLL-----------HFPYLKPDAFTYPSVLKACS 117
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ G + H VIK GF +V V ++ + YA+ + + K+FD M E+D +WN+
Sbjct: 118 GLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNN 177
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+I+ Y Q+G +AL++F++M K + K ++VTL+ V+ + A L L GK IH ++++
Sbjct: 178 VISCYYQDGQPEKALELFEEM-KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRS 236
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
V ++++DMY KCG +++A++ F Q++ KNV SW +MIAGY + ++ ++LF
Sbjct: 237 GFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELF 296
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
+M + G+RP T S+L ACS + +Q G +++ +E + ++DL +
Sbjct: 297 RRMDEEGIRPTLTTLSSILMACSRSVNLQLG-KFIHGYIIRNRVEADIFVNSSLIDLYFK 355
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLL 466
G + A ++ + M K + V W ++
Sbjct: 356 CGNIGSAENVFQNMP-KTNVVSWNVMI 381
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 146/286 (51%), Gaps = 7/286 (2%)
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
+D+ + S+L C + H ++ G + + + +LI+ Y H+ S K+
Sbjct: 1 MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYF-SCHLFQSAKL 59
Query: 246 FDGMIEK--DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
IE D WN ++A +N + E L+VF +++ +K +A T +VL A + L
Sbjct: 60 VFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGL 119
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G + GK +H VIK V+V +S + MY KC + A K F++M E++V SW +I
Sbjct: 120 GRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVI 179
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW-LNTMGHEFN 422
+ Y + +AL+LF +M +G +P+ +T +V+S+C+ ++ G + + F
Sbjct: 180 SCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFA 239
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
++ V +VD+ G+ G L+ A ++ E ++ K + V W S++
Sbjct: 240 LDGFVS--SALVDMYGKCGCLEMAKEVFEQIQRK-NVVSWNSMIAG 282
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 232/681 (34%), Positives = 355/681 (52%), Gaps = 83/681 (12%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL-HDLHSGKQAHQQA 99
+N++I + D A+ F M+ P TF + + + D Q H A
Sbjct: 116 YNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAA 175
Query: 100 FIFGFHRDVFVSSALIDMYSKCGE----LSDARKLFDEIPQRIRNIVSWTSMLTGYVQN- 154
G VS+AL+ +YSKC L ARK+FDEI ++ SWT+M+TGYV+N
Sbjct: 176 LKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDER--SWTTMMTGYVKNG 233
Query: 155 -------------DNAREALLLFKEFLLEESECGGASEN--------SDNVFVDSVAIAS 193
DN + L+ + + G E S + +D S
Sbjct: 234 YFDLGEELLEGMDDNMK--LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
V+ AC+ + + + H +V++R D N+L+ Y + G D +R +F+ M KD
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKD 350
Query: 254 AVTWNSIIAIY-------------------------------AQNGLAAEALDVFDQMVK 282
V+WN++++ Y A+NG E L +F M +
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
C+ S + + A LG G+ H Q++K+ + S+ G ++I MY KCG V+
Sbjct: 411 EGFEPCD-YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVE 469
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS 402
AR+ F M + SW A+IA G H EA+D++ +M+K G+RP+ IT ++VL+ACS
Sbjct: 470 EARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS 529
Query: 403 HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVW 462
HAGLV +G + ++M + I PG +HY ++DLL R+GK +A +IE + K +W
Sbjct: 530 HAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIW 589
Query: 463 GSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNR 522
+LL CR+H N++LG IAA KLF L P + G ++LLSN++A G+WE+V R R LM++R
Sbjct: 590 EALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDR 649
Query: 523 RLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDV 582
+ K S +E+ +VH FLV D HP+ E +Y YL++L +++ +GYV D + V+HDV
Sbjct: 650 GVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDV 709
Query: 583 DQE-EKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIV 623
+ + KE L HSEK+A NLR CGDCH R +S VV R+I+
Sbjct: 710 ESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDII 769
Query: 624 VRDSKRFHYFKDGLCSCGDYW 644
+RD KRFH+F++G CSCG++W
Sbjct: 770 LRDRKRFHHFRNGECSCGNFW 790
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 179/369 (48%), Gaps = 49/369 (13%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D + ++N++I+ G EAL M + T+P I++C+ L GK
Sbjct: 247 DNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGK 306
Query: 94 QAHQQAFI---FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
Q H F FH D ++L+ +Y KCG+ +AR +F+++P + ++VSW ++L+G
Sbjct: 307 QVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAK--DLVSWNALLSG 360
Query: 151 YVQNDNAREALLLFKEFL-------------LEESECGGAS------------ENSDNVF 185
YV + + EA L+FKE L E+ G E D F
Sbjct: 361 YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAF 420
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
++ +VL A NG + H ++K GFDS + GN LI YA+ G V+ +R+V
Sbjct: 421 SGAIKSCAVLGA----YCNG--QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQV 474
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F M D+V+WN++IA Q+G AEA+DV+++M+K ++ + +TL VL A +H G+
Sbjct: 475 FRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKK-GIRPDRITLLTVLTACSHAGL 533
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTS----IIDMYCKCGQVDLARKAFNQMKEKNVRS-WT 360
+ G+ D M+ + G +ID+ C+ G+ A + K W
Sbjct: 534 VDQGRKYFDS---METVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWE 590
Query: 361 AMIAGYGMH 369
A+++G +H
Sbjct: 591 ALLSGCRVH 599
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 208/492 (42%), Gaps = 105/492 (21%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L + H FGF + + LID+Y K EL+ AR+LFDEI + + ++ T+M+
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDK--IARTTMV 87
Query: 149 TGYVQNDN---AR----EALLLFKEFLLEESECGGASENSD-----NVFV---------D 187
+GY + + AR +A + ++ ++ + G S N+D N+F D
Sbjct: 88 SGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147
Query: 188 SVAIASVLSACSRVTVN-GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH----VDVS 242
+ ASVL+ + V + H +K G V N L+ Y++ + +
Sbjct: 148 NFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSA 207
Query: 243 RKVFDGMIEKDAVTW--------------------------------NSIIAIYAQNGLA 270
RKVFD ++EKD +W N++I+ Y G
Sbjct: 208 RKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFY 267
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EAL++ +MV S+ ++ + T +V+ A A G+L+LGK +H V++ + + S S
Sbjct: 268 QEALEMVRRMV-SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNS 325
Query: 331 IIDMYCKCGQVDLARK-------------------------------AFNQMKEKNVRSW 359
++ +Y KCG+ D AR F +MKEKN+ SW
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSW 385
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW---LNT 416
MI+G + E L LF M + G P F + +C+ G G + L
Sbjct: 386 MIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK 445
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH---- 472
+G + ++ G ++ + + G ++EA + M D V W +L+ A H
Sbjct: 446 IGFDSSLSAG----NALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGA 500
Query: 473 KNVDLGEIAAKK 484
+ VD+ E KK
Sbjct: 501 EAVDVYEEMLKK 512
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 147/347 (42%), Gaps = 68/347 (19%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
L K + + N+ SW +I+ LA G E L+ FS M++ P F AIKSC+ L
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+G+Q H Q GF + +ALI MY+KCG + +AR++F +P + VSW ++
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP--CLDSVSWNAL 489
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Q+ + EA+ +++E L + D + + +VL+ACS
Sbjct: 490 IAALGQHGHGAEAVDVYEEML------------KKGIRPDRITLLTVLTACS-------- 529
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-----IEKDAVTWNSIIA 262
G VD RK FD M I A + +I
Sbjct: 530 ---------------------------HAGLVDQGRKYFDSMETVYRIPPGADHYARLID 562
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
+ ++G ++A + +++S K A A+L G + LG D++ + E
Sbjct: 563 LLCRSGKFSDA----ESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618
Query: 323 ESVIVGTSII--DMYCKCGQVDLARKAFNQMKEKNVR-----SWTAM 362
GT ++ +M+ GQ + + M+++ V+ SW M
Sbjct: 619 HD---GTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEM 662
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 244/643 (37%), Positives = 356/643 (55%), Gaps = 43/643 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ + + + S+N++I+ A ++ A+ F MRKL T I +C
Sbjct: 96 LFDE-IPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRV 154
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL KQ H + GF V++A + YSK G L +A +F + + +R+ VSW SM
Sbjct: 155 DLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE-LRDEVSWNSM 211
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y Q+ +AL L+KE + + + +D +ASVL+A + +
Sbjct: 212 IVAYGQHKEGAKALALYKEMIFKGFK------------IDMFTLASVLNALTSLDHLIGG 259
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV---SRKVFDGMIEKDAVTWNSIIAIY 264
HG +IK GF VG+ LID Y++ G D S KVF ++ D V WN++I+ Y
Sbjct: 260 RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGY 319
Query: 265 AQNG-LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
+ N L+ EA+ F QM + + + + V A ++L K IH IK +
Sbjct: 320 SMNEELSEEAVKSFRQM-QRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPS 378
Query: 324 SVI-VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ I V ++I +Y K G + AR F++M E N S+ MI GY H EAL L+ +M
Sbjct: 379 NRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRM 438
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
+ +G+ PN ITFV+VLSAC+H G V EG + NTM F IEP EHY CM+DLLGRAGK
Sbjct: 439 LDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGK 498
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
L+EA I+ M K V W +LLGACR HKN+ L E AA +L ++P +V+L+N+
Sbjct: 499 LEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANM 558
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
YA+A +WE++ R M+ +R+ K PG S +E++ K H F+ D HP ++ EYLEE+
Sbjct: 559 YADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEM 618
Query: 563 NVKLQEVGYVTDMT-SVIHDVDQEEKEMTLRI--HSEKLA------------------NL 601
K+++VGYV D +++ + + E + +R+ HSEKLA NL
Sbjct: 619 MKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNL 678
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
R+CGDCH I+ +S V REI+VRD+ RFH FKDG CSCGDYW
Sbjct: 679 RICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 131/288 (45%), Gaps = 36/288 (12%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N ++ AYA+ + ++R++FD + + D V++N++I+ YA A+ +F +M K
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK-LGF 136
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+ + TLS ++ A + L K +H + + V + + Y K G + A
Sbjct: 137 EVDGFTLSGLIAACCDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVS 194
Query: 347 AFNQMKE-KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS--- 402
F M E ++ SW +MI YG H +AL L+ +MI G + + T SVL+A +
Sbjct: 195 VFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLD 254
Query: 403 --------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
H L++ G+H + +G ++D + G YD + +
Sbjct: 255 HLIGGRQFHGKLIKAGFHQNSHVG------------SGLIDFYSKCGGCDGMYDSEKVFQ 302
Query: 455 --VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE-----PNNCGY 495
+ D VVW +++ + N +L E A K +++ P++C +
Sbjct: 303 EILSPDLVVWNTMISGYSM--NEELSEEAVKSFRQMQRIGHRPDDCSF 348
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 44/204 (21%)
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L GK +H +K + S + +++Y KCG++ AR AF +E NV S+ ++
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 366 YGMHCR----------------------------ARE---ALDLFYKMIKAGVRPNYITF 394
Y + ARE A+ LF +M K G + T
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 395 VSVLSA-CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG----CMVDLLGRAGKLKEAYDL 449
+++A C L+++ H F++ G + Y V + G L+EA +
Sbjct: 144 SGLIAACCDRVDLIKQ--------LHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 450 IEGMKVKADFVVWGSLLGACRIHK 473
GM D V W S++ A HK
Sbjct: 196 FYGMDELRDEVSWNSMIVAYGQHK 219
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/525 (40%), Positives = 319/525 (60%), Gaps = 32/525 (6%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+S A K+F +I + I N+ W +++ GY + N+ A L++E + S
Sbjct: 69 MSYAHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRV-----------SGL 116
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V D+ ++ A + + + E H VI+ GF S + V N+L+ YA G V +
Sbjct: 117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY 176
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
KVFD M EKD V WNS+I +A+NG EAL ++ +M S +K + T+ ++L A A +
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKI 235
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G L LGK +H +IK+ L ++ ++D+Y +CG+V+ A+ F++M +KN SWT++I
Sbjct: 236 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLI 295
Query: 364 AGYGMHCRAREALDLF-YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
G ++ +EA++LF Y G+ P ITFV +L ACSH G+V+EG+ + M E+
Sbjct: 296 VGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYK 355
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
IEP +EH+GCMVDLL RAG++K+AY+ I+ M ++ + V+W +LLGAC +H + DL E A
Sbjct: 356 IEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFAR 415
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
++ +LEPN+ G +VLLSN+YA+ RW DV++ R M + K PG SLVE+ +VH F
Sbjct: 416 IQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEF 475
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
L+GDK HPQ + IY L+E+ +L+ GYV +++V DV++EEKE + HSEK+A
Sbjct: 476 LMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAF 535
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
NLRVC DCH I+L+SKV +REIVVRD R
Sbjct: 536 MLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSR 580
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 179/345 (51%), Gaps = 17/345 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSAL 86
+F+K NVF WN++I A G+S+ A + MR L P T+P IK+ + +
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM 134
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D+ G+ H GF ++V ++L+ +Y+ CG+++ A K+FD++P+ +++V+W S
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWNS 192
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ G+ +N EAL L+ E NS + D I S+LSAC+++ +
Sbjct: 193 VINGFAENGKPEEALALYTEM------------NSKGIKPDGFTIVSLLSACAKIGALTL 240
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H ++IK G + N L+D YAR G V+ ++ +FD M++K++V+W S+I A
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 300
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESV 325
NG EA+++F M + + +T +L A +H G+++ G + + +E +
Sbjct: 301 NGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRI 360
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + GQV A + M + NV W ++ +H
Sbjct: 361 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSA 85
TLF++ VDKN+V SW S+I LA G EA+ F M L P TF + +CS
Sbjct: 278 TLFDEMVDKNSV-SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 86 LHDLHSGKQAHQQAF-IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
+ G + ++ + + ++D+ ++ G++ A + +P + N+V W
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ-PNVVIW 395
Query: 145 TSML 148
++L
Sbjct: 396 RTLL 399
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/573 (37%), Positives = 329/573 (57%), Gaps = 25/573 (4%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS 68
VSS V + +NT L N + NVF++N++I+ G E + MR
Sbjct: 76 VSSFVQLEIELPSNT-LKAGENDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEG 134
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
+ P + TFPCAIK+C D+ K+ H F FG DVF+ SAL++ Y K G + A+
Sbjct: 135 VMPDKFTFPCAIKACL---DVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQ 191
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
F+E+P IR++V W +M+ GY Q L F+ N ++V
Sbjct: 192 VAFEELP--IRDVVLWNAMVNGYAQIGQFEMVLETFRRM------------NDESVVPSR 237
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
+ LS + + HGF +K G+DS V V N+LID Y + ++ + ++F+
Sbjct: 238 FTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEM 297
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M EKD +WNSI++++ Q G L + D+M+ ++ + VT++ VL A +HL L
Sbjct: 298 MREKDIFSWNSIVSVHEQCGDHDGTLRLLDRML-GAGIQPDLVTVTTVLPACSHLAALMH 356
Query: 309 GKCIHDQVIKMDLE------ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
G+ IH +I L + V++ ++IDMY KCG + A F +M K+V SW M
Sbjct: 357 GREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIM 416
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
I GYGMH EAL++F +M + ++P+ +TFV VLSACSHAG V +G ++L M +++
Sbjct: 417 IMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYD 476
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
+ P +EHY C++D+LGRAG+L EAY+L M ++A+ VVW +LL ACR+HK+ L E+AA
Sbjct: 477 VAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAA 536
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
+++FELEP +CG +VL+SN+Y GR+E+V R M+ + + KTPG S +EL+ VH F
Sbjct: 537 QRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVF 596
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDM 575
+ D+ HP+ IY L L +L E GYV D+
Sbjct: 597 VSADRAHPEAXSIYAGLNSLTARLXEHGYVPDV 629
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 120/277 (43%), Gaps = 34/277 (12%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKY--VDKNNVFSWNSVIADLARGGDSVEAL 58
MK+ S V+ S +D + + + + + ++FSWNS+++ + GD L
Sbjct: 264 MKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTL 323
Query: 59 RAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHR------DVFVSS 112
R M + P T + +CS L L G++ H + G + DV + +
Sbjct: 324 RLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKN 383
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
A+IDMY+KCG + DA +F+ + +++ SW M+ GY + EAL +F
Sbjct: 384 AVIDMYAKCGSMRDAHLVFERMSN--KDVASWNIMIMGYGMHGYGNEALEMFSRMC---- 437
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTL--- 229
+ D V VLSACS G F+++ S+ V T+
Sbjct: 438 --------EVQLKPDEVTFVGVLSACSHA---GFVSQGRNFLVQ--MKSKYDVAPTIEHY 484
Query: 230 ---IDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
ID R G +D + ++ M IE + V W +++A
Sbjct: 485 TCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLA 521
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/650 (36%), Positives = 345/650 (53%), Gaps = 48/650 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSAL 86
+F D+N V SW +++ R GD+ LR MR S P T ++K+C +
Sbjct: 61 VFGGMRDRN-VVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVV 119
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D +G H G+ V+S+L+ +YSK G + DAR++FD I +W +
Sbjct: 120 GDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLG-SGIATWNA 178
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M++GY + R+ALL+F+E E + D AS+L ACS +
Sbjct: 179 MVSGYAHAGHGRDALLVFREMRRHEGQ----------HQPDEFTFASLLKACS--GLGAT 226
Query: 207 TEGA--HGFVIKRGFD--SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
EGA H + GF S + L+D Y + + V+ +VF+ + K+ + W +++
Sbjct: 227 REGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVV 286
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
+AQ G EAL++F + +S + ++ LS+V+ +A ++ G+ +H IK
Sbjct: 287 GHAQEGQVTEALELFRRFWRS-GARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTG 345
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
V G SI+DMY KCG D A + F +M+ NV SWT M+ G G H REA+ LF +M
Sbjct: 346 TDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEM 405
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
GV P+ +T++++LSACSHAGLV E + + + + + P EHY CMVDLLGRAG+
Sbjct: 406 RAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGE 465
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
L+EA DLI M ++ VW +LL ACR+HK+V +G A L ++ +N +V LSN+
Sbjct: 466 LREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNV 525
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE---HPQHEKIYEYL 559
A AG W + + R M+ R L K G S VE+ +VH F G E HPQ I L
Sbjct: 526 LAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVL 585
Query: 560 EELNVKLQE-VGY-VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
++ +++E +GY D +HDVD+E + +LR HSE+LA
Sbjct: 586 RDMETRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEP 645
Query: 600 -----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH + +S VV R +VVRD+ RFH F+ G CSC DYW
Sbjct: 646 IRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 695
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 220/449 (48%), Gaps = 30/449 (6%)
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
L G Q H GF D + + LIDMY KCGEL A ++F + R RN+VSWT+++
Sbjct: 20 LRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGM--RDRNVVSWTALM 77
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
G++++ +A L L E ASE + N + +++ L AC V
Sbjct: 78 VGFLRHGDATGCLRLLGEMRT-------ASEAAPNEYT----LSASLKACCVVGDTAAGV 126
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQN 267
G HG ++ G+ V ++L+ Y++GG + +R+VFDG + TWN++++ YA
Sbjct: 127 GIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHA 186
Query: 268 GLAAEALDVFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES-- 324
G +AL VF +M + + + T +++L A + LG R G +H + +
Sbjct: 187 GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASN 246
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
I+ +++DMY KC ++ +A + F +++ KNV WTA++ G+ + EAL+LF + +
Sbjct: 247 AILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWR 306
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
+G RP+ SV+ + LV++G ++ G + V +VD+ + G
Sbjct: 307 SGARPDSHVLSSVVGVLADFALVEQG-RQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPD 365
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVL 498
EA + M+ + V W +++ H LG A LFE +EP+ Y L
Sbjct: 366 EAERMFREMRAP-NVVSWTTMVNGLGKH---GLGREAV-ALFEEMRAGGVEPDEVTYLAL 420
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKT 527
LS ++AG ++ R S ++ R +
Sbjct: 421 LSAC-SHAGLVDECRRYFSCIRRDRTVRP 448
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 144/280 (51%), Gaps = 5/280 (1%)
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
IA +L A +R + HG + K GF S+ +GN LID Y + G +D++ +VF GM
Sbjct: 7 IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+++ V+W +++ + ++G A L + +M +++ N TLSA L A +G G
Sbjct: 67 DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
IH ++ +E +V +S++ +Y K G++ AR+ F+ + +W AM++GY
Sbjct: 127 GIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHA 186
Query: 370 CRAREALDLFYKMIK--AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM-GHEFNIEPG 426
R+AL +F +M + +P+ TF S+L ACS G +EG M F+
Sbjct: 187 GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASN 246
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
G +VD+ + +L A + E ++ K + + W +++
Sbjct: 247 AILAGALVDMYVKCRRLPVAMQVFERLERK-NVIQWTAVV 285
>gi|115486035|ref|NP_001068161.1| Os11g0583200 [Oryza sativa Japonica Group]
gi|113645383|dbj|BAF28524.1| Os11g0583200 [Oryza sativa Japonica Group]
Length = 703
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/600 (37%), Positives = 339/600 (56%), Gaps = 36/600 (6%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS-GKQA 95
V S+ + I+ A+ G + AL AF+ M +L L P TFP A K+ ++ + G Q
Sbjct: 81 TVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQI 140
Query: 96 HQQAFIFGF-HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H A FG+ D FVS A +DMY K G L AR LF E+P R N+V+W +++T V +
Sbjct: 141 HSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNR--NVVAWNAVMTNAVLD 198
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
E + E E GG + V+ + +AC+ + E HGFV
Sbjct: 199 GRPLETI----EAYFGLREAGG--------LPNVVSACAFFNACAGAMYLSLGEQFHGFV 246
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+K GF+ +V V N+++D Y + +R VFDGM +++V+W S++A YAQNG EA
Sbjct: 247 VKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAF 306
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDM 334
+ +S + + + SA+ LG L LG+ +H ++ ++ ++ V ++++DM
Sbjct: 307 AAYLGARRSGEEPTDFMVSSALTTCAGLLG-LHLGRALHAVAVRSCIDANIFVASALVDM 365
Query: 335 YCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-VRPNYIT 393
Y KCG V+ A + F + ++N+ +W AMI GY A+ AL +F MI++G PNYIT
Sbjct: 366 YGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYIT 425
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
V+V+++CS GL ++G+ TM F IEP EHY C+VDLLGRAG ++AY++I+GM
Sbjct: 426 LVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGM 485
Query: 454 KVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVE 513
++ VWG+LLGAC++H +LG IAA+KLFEL+P + G HVLLSN++A+AGRW +
Sbjct: 486 PMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEAT 545
Query: 514 RTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVT 573
R MKN + K PG S V + VH F D +H + +I L +L ++Q GY+
Sbjct: 546 DIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMP 605
Query: 574 DMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLIS 615
D ++D+++EEKE + HSEKLA NLR+C DCH + IS
Sbjct: 606 DTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFIS 665
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Query: 307 RLGKCIHDQVIKMDLEE-SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
RLG+ H + +++ S + ++++Y K A A V S+TA I+G
Sbjct: 32 RLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISG 91
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
H R AL F M++ G+RPN TF S A + A ++++ F P
Sbjct: 92 AAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLP 151
Query: 426 GVEHYGC-MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
C +D+ + G+LK A L M + + V W +++
Sbjct: 152 VDPFVSCAALDMYFKTGRLKLARHLFGEMPNR-NVVAWNAVM 192
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/556 (38%), Positives = 328/556 (58%), Gaps = 39/556 (7%)
Query: 112 SALIDMYSKCGELSDARKLFDEIP-QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
S LI ++S C L ARK+FD++ + W +M GY +N + R+AL+++ + L
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI 230
E G S I+ L AC + V G H ++KR + V N L+
Sbjct: 231 FIEPGNFS------------ISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLL 278
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
Y G D +RKVFDGM E++ VTWNS+I++ ++ E ++F +M + + +
Sbjct: 279 KLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEM-IGFSW 337
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
TL+ +L A + + L GK IH Q++K + V + S++DMY KCG+V+ +R+ F+
Sbjct: 338 ATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDV 397
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
M K++ SW M+ Y ++ E ++LF MI++GV P+ ITFV++LS CS GL + G
Sbjct: 398 MLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYG 457
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
M EF + P +EHY C+VD+LGRAGK+KEA +IE M K +WGSLL +CR
Sbjct: 458 LSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCR 517
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
+H NV +GEIAAK+LF LEP+N G +V++SNIYA+A W++V++ R +MK R + K G
Sbjct: 518 LHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGC 577
Query: 531 SLVELRGKVHAFLVGD----KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
S V+++ K+ F+ G + +++K++ L+E +++ GY + + V+HDVD+E
Sbjct: 578 SWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQE---AIEKSGYSPNTSVVLHDVDEET 634
Query: 587 KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSK 628
K + HSE+LA NLRVC DCH+ ++++S+V R IV+RD+K
Sbjct: 635 KANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTK 694
Query: 629 RFHYFKDGLCSCGDYW 644
RFH+F DG+CSC DYW
Sbjct: 695 RFHHFVDGICSCKDYW 710
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 158/332 (47%), Gaps = 19/332 (5%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
W ++ +R G +AL + M + P + A+K+C L DL G+ H Q
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIV 263
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
D V + L+ +Y + G DARK+FD + + RN+V+W S+++ + E
Sbjct: 264 KRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSE--RNVVTWNSLISVLSKKVRVHEM 321
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
LF++ ++E G + ++L ACSRV + H ++K
Sbjct: 322 FNLFRK--MQEEMIG----------FSWATLTTILPACSRVAALLTGKEIHAQILKSKEK 369
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
+V + N+L+D Y + G V+ SR+VFD M+ KD +WN ++ YA NG E +++F+ M
Sbjct: 370 PDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWM 429
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG--TSIIDMYCKC 338
++S V + +T A+L + G+ G + ++ +K + S + ++D+ +
Sbjct: 430 IES-GVAPDGITFVALLSGCSDTGLTEYGLSLFER-MKTEFRVSPALEHYACLVDILGRA 487
Query: 339 GQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
G++ A K M K S W +++ +H
Sbjct: 488 GKIKEAVKVIETMPFKPSASIWGSLLNSCRLH 519
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV +WNS+I+ L++ E F M++ + + +T + +CS + L +G
Sbjct: 297 MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTG 356
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H Q DV + ++L+DMY KCGE+ +R++FD + +++ SW ML Y
Sbjct: 357 KEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM--LTKDLASWNIMLNCYA 414
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N N E + LF E+++E V D + ++LS CS G+TE +G
Sbjct: 415 INGNIEEVINLF-EWMIE-----------SGVAPDGITFVALLSGCSD---TGLTE--YG 457
Query: 213 FVIKRGFDSEVGVGNT------LIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
+ +E V L+D R G + + KV + M + A W S++
Sbjct: 458 LSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLL 513
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/556 (38%), Positives = 328/556 (58%), Gaps = 39/556 (7%)
Query: 112 SALIDMYSKCGELSDARKLFDEIP-QRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
S LI ++S C L ARK+FD++ + W +M GY +N + R+AL+++ + L
Sbjct: 178 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 237
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI 230
E G S I+ L AC + V G H ++KR + V N L+
Sbjct: 238 FIEPGNFS------------ISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLL 285
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
Y G D +RKVFDGM E++ VTWNS+I++ ++ E ++F +M + + +
Sbjct: 286 KLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEM-IGFSW 344
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
TL+ +L A + + L GK IH Q++K + V + S++DMY KCG+V+ +R+ F+
Sbjct: 345 ATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDV 404
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
M K++ SW M+ Y ++ E ++LF MI++GV P+ ITFV++LS CS GL + G
Sbjct: 405 MLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYG 464
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
M EF + P +EHY C+VD+LGRAGK+KEA +IE M K +WGSLL +CR
Sbjct: 465 LSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCR 524
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
+H NV +GEIAAK+LF LEP+N G +V++SNIYA+A W++V++ R +MK R + K G
Sbjct: 525 LHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGC 584
Query: 531 SLVELRGKVHAFLVGD----KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
S V+++ K+ F+ G + +++K++ L+E +++ GY + + V+HDVD+E
Sbjct: 585 SWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQE---AIEKSGYSPNTSVVLHDVDEET 641
Query: 587 KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSK 628
K + HSE+LA NLRVC DCH+ ++++S+V R IV+RD+K
Sbjct: 642 KANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTK 701
Query: 629 RFHYFKDGLCSCGDYW 644
RFH+F DG+CSC DYW
Sbjct: 702 RFHHFVDGICSCKDYW 717
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 158/332 (47%), Gaps = 19/332 (5%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
W ++ +R G +AL + M + P + A+K+C L DL G+ H Q
Sbjct: 211 WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIV 270
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
D V + L+ +Y + G DARK+FD + + RN+V+W S+++ + E
Sbjct: 271 KRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSE--RNVVTWNSLISVLSKKVRVHEM 328
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
LF++ ++E G + ++L ACSRV + H ++K
Sbjct: 329 FNLFRK--MQEEMIG----------FSWATLTTILPACSRVAALLTGKEIHAQILKSKEK 376
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
+V + N+L+D Y + G V+ SR+VFD M+ KD +WN ++ YA NG E +++F+ M
Sbjct: 377 PDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWM 436
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG--TSIIDMYCKC 338
++S V + +T A+L + G+ G + ++ +K + S + ++D+ +
Sbjct: 437 IES-GVAPDGITFVALLSGCSDTGLTEYGLSLFER-MKTEFRVSPALEHYACLVDILGRA 494
Query: 339 GQVDLARKAFNQMKEKNVRS-WTAMIAGYGMH 369
G++ A K M K S W +++ +H
Sbjct: 495 GKIKEAVKVIETMPFKPSASIWGSLLNSCRLH 526
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV +WNS+I+ L++ E F M++ + + +T + +CS + L +G
Sbjct: 304 MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTG 363
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H Q DV + ++L+DMY KCGE+ +R++FD + +++ SW ML Y
Sbjct: 364 KEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM--LTKDLASWNIMLNCYA 421
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N N E + LF E+++E V D + ++LS CS G+TE +G
Sbjct: 422 INGNIEEVINLF-EWMIE-----------SGVAPDGITFVALLSGCSD---TGLTE--YG 464
Query: 213 FVIKRGFDSEVGVGNT------LIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
+ +E V L+D R G + + KV + M + A W S++
Sbjct: 465 LSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLL 520
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 228/605 (37%), Positives = 338/605 (55%), Gaps = 59/605 (9%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S++S + K LF + + SWNS+++ A+ E+L F M +
Sbjct: 85 NSLISVLTKSGFLDEAARLFGSMPEPDQC-SWNSMVSGFAQHDRFEESLEYFVKMHREDF 143
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
+F A+ +C+ L DL+ G Q H + DV++ SALIDMYSKCG ++ A +
Sbjct: 144 LLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEE 203
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+F + +R N+V+W S++T Y QN A EAL +F + + D V
Sbjct: 204 VFSGMIER--NLVTWNSLITCYEQNGPASEALEVFVRMM------------DSGLEPDEV 249
Query: 190 AIASVLSACSRVTVNGVTEG--AHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVF 246
+ASV+SAC+ ++ + EG H V+K F ++ +GN L+D YA+ V+ +R+VF
Sbjct: 250 TLASVVSACA--SLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVF 307
Query: 247 D-------------------------------GMIEKDAVTWNSIIAIYAQNGLAAEALD 275
D M +++ V+WN++IA Y QNG EAL
Sbjct: 308 DRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALR 367
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE------ESVIVGT 329
+F +++K + T +L A A+L L LG+ H V+K E + VG
Sbjct: 368 LF-RLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGN 426
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
S+IDMY KCG ++ + F +MKE++ SW A+I GY + EAL +F KM+ G +P
Sbjct: 427 SLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKP 486
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
+++T + VL ACSHAGLV+EG H+ +M E + P +HY CMVDLLGRAG L EA +L
Sbjct: 487 DHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNL 545
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
IE M V D VVWGSLL AC++H N+++G+ AA+KL E++P N G +VLLSN+YA GRW
Sbjct: 546 IEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRW 605
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
DV R R LM+ + + K PG S +E+ +VH FLV DK HP ++IY L+ L +++ V
Sbjct: 606 GDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRV 665
Query: 570 GYVTD 574
GY+ D
Sbjct: 666 GYIPD 670
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 226/453 (49%), Gaps = 62/453 (13%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P S F + SC + H + + F ++F+ + LID+Y KC L DARKL
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 131 FDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS-----------E 179
FD +PQ RN +W S+++ ++ EA LF + E +C S E
Sbjct: 73 FDRMPQ--RNTFTWNSLISVLTKSGFLDEAARLFGS-MPEPDQCSWNSMVSGFAQHDRFE 129
Query: 180 NSDNVFV---------DSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLI 230
S FV + + S LSAC+ + + H V K + ++V +G+ LI
Sbjct: 130 ESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALI 189
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
D Y++ G V + +VF GMIE++ VTWNS+I Y QNG A+EAL+VF +M+ S ++ +
Sbjct: 190 DMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDS-GLEPDE 248
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFN 349
VTL++V+ A A L L+ G IH +V+K + + +++G +++DMY KC +V+ AR+ F+
Sbjct: 249 VTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFD 308
Query: 350 QMK-------------------------------EKNVRSWTAMIAGYGMHCRAREALDL 378
+M ++NV SW A+IAGY + EAL L
Sbjct: 309 RMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRL 368
Query: 379 FYKMIKAGVRPNYITFVSVLSACSH-AGLVQEGWHWLNTMGHEFNIEPGVEH----YGCM 433
F + + + P + TF ++LSAC++ A L+ + + F + G E +
Sbjct: 369 FRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSL 428
Query: 434 VDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+D+ + G +++ + E MK + D V W +++
Sbjct: 429 IDMYMKCGSIEDGSRVFEKMKER-DCVSWNAII 460
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/482 (43%), Positives = 290/482 (60%), Gaps = 52/482 (10%)
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY--------- 264
V+ GFD V N+LI AY G V +RKVFD M+EKD ++W SI+ Y
Sbjct: 168 VLVGGFDRHRFVENSLIGAYVACGDVGAARKVFDEMVEKDVISWTSIVVAYTRSGDMRSA 227
Query: 265 ----------------------AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
AQN + +AL+VFD+M + V + V+L+ + A A
Sbjct: 228 EEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMAELGMV-IDEVSLTGAISACAQ 286
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
LG LR + + + +V+VG+ ++DMY KCG +D A K F M+EKNV ++++M
Sbjct: 287 LGALRRAAWVQEIAERTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSM 346
Query: 363 IAGYGMHCRAREALDLFYKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
IAG H RA EA+ LF +M+ +A V PN++TF+ VL+ACSHAG+V EG ++ M ++
Sbjct: 347 IAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTACSHAGMVGEGRYYFAQMKDKY 406
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
I P +HY CMVDLLGRAG + EA DL+ M V VWG+LLGACRIH ++ ++
Sbjct: 407 GIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGGVWGALLGACRIHGKSEIAKVV 466
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR-GKVH 540
A+ LF+LEP + G +VLLSNI A+AG+WE+V + R LM+ +RL K P SL E R G VH
Sbjct: 467 AEHLFKLEPESIGNYVLLSNILASAGKWEEVSKVRILMRKQRLKKDPAVSLFEGRDGLVH 526
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA- 599
F GD HP+ +I + L EL KL+ GYV ++S+++DV+ EEKE L HSEKLA
Sbjct: 527 QFFAGDNAHPRTHEIKKALLELVAKLKLEGYVPILSSIVYDVNDEEKERLLMGHSEKLAL 586
Query: 600 -----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGD 642
NLR+C DCH ++L+S+V EI+VRD+ RFH+FK+G CSCG
Sbjct: 587 SFGLLTLGSGCTIRIIKNLRICDDCHLFMQLVSRVESVEIIVRDNMRFHHFKNGECSCGG 646
Query: 643 YW 644
+W
Sbjct: 647 FW 648
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 192/422 (45%), Gaps = 80/422 (18%)
Query: 57 ALRAFSSMRK-----LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ-QAFIFGFHRDVFV 110
R FS +R+ L P F KS +A L + AH + GF R FV
Sbjct: 122 PFRVFSHLRRAHGAELPFLPF--AFSTLAKSATASRSLPAAAAAHAVSVLVGGFDRHRFV 179
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF-----K 165
++LI Y CG++ ARK+FDE+ + ++++SWTS++ Y ++ + R A +F K
Sbjct: 180 ENSLIGAYVACGDVGAARKVFDEMVE--KDVISWTSIVVAYTRSGDMRSAEEVFGRCPVK 237
Query: 166 EFLLEESECGGASENSDNV--------------FVDSVAIASVLSACSRVTVNGVTEGAH 211
+ + + G ++N+ V +D V++ +SAC+++
Sbjct: 238 DMVAWTAMVTGYAQNAMPVKALEVFDRMAELGMVIDEVSLTGAISACAQLGALRRAAWVQ 297
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+ GF + V VG+ L+D YA+ G +D + KVF GM EK+ T++S+IA A +G A+
Sbjct: 298 EIAERTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIAGLASHGRAS 357
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLEESVIVGTS 330
EA+ +F +MV +V+ N VT VL A +H G++ G+ Q+ K + S
Sbjct: 358 EAIALFKEMVNRANVEPNHVTFIGVLTACSHAGMVGEGRYYFAQMKDKYGIMPSADHYAC 417
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++D+ + G VD EALDL M V P+
Sbjct: 418 MVDLLGRAGLVD-------------------------------EALDLVRSM---SVTPH 443
Query: 391 YITFVSVLSACSHAG------LVQEGWHWLNTMGHEFNIEP-GVEHYGCMVDLLGRAGKL 443
+ ++L AC G +V E H F +EP + +Y + ++L AGK
Sbjct: 444 GGVWGALLGACRIHGKSEIAKVVAE---------HLFKLEPESIGNYVLLSNILASAGKW 494
Query: 444 KE 445
+E
Sbjct: 495 EE 496
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 20/267 (7%)
Query: 36 NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
++ +W +++ A+ V+AL F M +L + + AI +C+ L L
Sbjct: 237 KDMVAWTAMVTGYAQNAMPVKALEVFDRMAELGMVIDEVSLTGAISACAQLGALRRAAWV 296
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
+ A GF +V V S L+DMY+KCG + +A K+F + + +N+ +++SM+ G +
Sbjct: 297 QEIAERTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQE--KNVYTYSSMIAGLASHG 354
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
A EA+ LFKE + N NV + V VL+ACS + G EG + F
Sbjct: 355 RASEAIALFKEMV-----------NRANVEPNHVTFIGVLTACSHAGMVG--EGRYYFAQ 401
Query: 216 ---KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAA 271
K G ++D R G VD + + M + W +++ +G +
Sbjct: 402 MKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGGVWGALLGACRIHGKSE 461
Query: 272 EALDVFDQMVK-STDVKCNAVTLSAVL 297
A V + + K + N V LS +L
Sbjct: 462 IAKVVAEHLFKLEPESIGNYVLLSNIL 488
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/574 (36%), Positives = 332/574 (57%), Gaps = 34/574 (5%)
Query: 69 LTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
L PT + I +C+ +L ++ H F D F+ ++LI +Y KCG + +A
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
K+FD++ R +++VSWTS++ GY QND EA+ L L + G
Sbjct: 107 KVFDKM--RNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNG------------ 152
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
AS+L A +G+ H +K + +V VG+ L+D YAR G +D++ VFD
Sbjct: 153 FTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDK 212
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
+ K+ V+WN++I+ +A+ G AL VF +M ++ + T S++ A+A +G L
Sbjct: 213 LDSKNGVSWNALISGFARKGDGETALMVFAEMQRNG-FEATHFTYSSIFSALAGIGALEQ 271
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
GK +H +IK + + VG +++DMY K G + ARK F ++ K++ +W +M+ +
Sbjct: 272 GKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQ 331
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
+ +EA+ F +M K+G+ N I+F+ +L+ACSH GLV+EG H+ + M E+N+EP +E
Sbjct: 332 YGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIE 390
Query: 429 HYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL 488
HY +VDLLGRAG L A I M ++ VWG+LL ACR+HKN +G+ AA +F+L
Sbjct: 391 HYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQL 450
Query: 489 EPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE 548
+P++ G VLL NIYA+ G W+ R R +MK + K P S VE+ VH F+ D
Sbjct: 451 DPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDT 510
Query: 549 HPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------- 599
HP+ E+IY+ +E+++K+++ GYV DM V+ VD++E+E L+ HSEK+A
Sbjct: 511 HPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMP 570
Query: 600 ---------NLRVCGDCHTVIRLISKVVDREIVV 624
N+R+CGDCH+ + ISKV +REIV+
Sbjct: 571 AGATIRIMKNIRICGDCHSAFKYISKVFEREIVI 604
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 177/347 (51%), Gaps = 17/347 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K +K+ V SW S+IA A+ EA+ M K P TF +K+ A
Sbjct: 108 VFDKMRNKDMV-SWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYA 166
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G Q H A +H DV+V SAL+DMY++CG++ A +FD++ +N VSW ++
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDS--KNGVSWNAL 224
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G+ + + AL++F E + +S+ SA + +
Sbjct: 225 ISGFARKGDGETALMVFAEM------------QRNGFEATHFTYSSIFSALAGIGALEQG 272
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H +IK VGNT++D YA+ G + +RKVF+ ++ KD VTWNS++ +AQ
Sbjct: 273 KWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQY 332
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL EA+ F++M KS + N ++ +L A +H G+++ GK D + + +LE +
Sbjct: 333 GLGKEAVSHFEEMRKSG-IYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEH 391
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAR 373
+++D+ + G ++ A +M E W A++A MH A+
Sbjct: 392 YVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK 438
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 20/240 (8%)
Query: 26 TTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSA 85
T +F+K KN V SWN++I+ AR GD AL F+ M++ T T+ + +
Sbjct: 207 TAVFDKLDSKNGV-SWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAG 265
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ L GK H FV + ++DMY+K G + DARK+F+ + +++V+W
Sbjct: 266 IGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLN--KDLVTWN 323
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
SMLT + Q +EA+ F+E ++++ ++ +L+ACS +
Sbjct: 324 SMLTAFAQYGLGKEAVSHFEEM------------RKSGIYLNQISFLCILTACSHGGL-- 369
Query: 206 VTEGAHGFVIKRGFDSEVGVGN--TLIDAYARGGHVDVSRK-VFDGMIEKDAVTWNSIIA 262
V EG H F + + ++ E + + T++D R G ++ + +F +E A W +++A
Sbjct: 370 VKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLA 429
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/650 (36%), Positives = 345/650 (53%), Gaps = 48/650 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSAL 86
+F D+N V SW +++ R GD+ LR MR S P T ++K+C +
Sbjct: 14 VFGGMRDRN-VVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVV 72
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D +G H G+ V+S+L+ +YSK G + DAR++FD I +W +
Sbjct: 73 GDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLG-SGIATWNA 131
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M++GY + R+ALL+F+E E + D AS+L ACS +
Sbjct: 132 MVSGYAHAGHGRDALLVFREMRRHEGQ----------HQPDEFTFASLLKACS--GLGAT 179
Query: 207 TEGA--HGFVIKRGFD--SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
EGA H + GF S + L+D Y + + V+ +VF+ + K+ + W +++
Sbjct: 180 REGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVV 239
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
+AQ G EAL++F + +S + ++ LS+V+ +A ++ G+ +H IK
Sbjct: 240 GHAQEGQVTEALELFRRFWRS-GARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTG 298
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
V G SI+DMY KCG D A + F +M+ NV SWT M+ G G H REA+ LF +M
Sbjct: 299 TDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEM 358
Query: 383 IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGK 442
GV P+ +T++++LSACSHAGLV E + + + + + P EHY CMVDLLGRAG+
Sbjct: 359 RAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGE 418
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
L+EA DLI M ++ VW +LL ACR+HK+V +G A L ++ +N +V LSN+
Sbjct: 419 LREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNV 478
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKE---HPQHEKIYEYL 559
A AG W + + R M+ R L K G S VE+ +VH F G E HPQ I L
Sbjct: 479 LAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVL 538
Query: 560 EELNVKLQE-VGY-VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
++ +++E +GY D +HDVD+E + +LR HSE+LA
Sbjct: 539 RDMETRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEP 598
Query: 600 -----NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH + +S VV R +VVRD+ RFH F+ G CSC DYW
Sbjct: 599 IRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 648
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 208/421 (49%), Gaps = 30/421 (7%)
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY KCGEL A ++F + R RN+VSWT+++ G++++ +A L L E
Sbjct: 1 MYVKCGELDLACEVFGGM--RDRNVVSWTALMVGFLRHGDATGCLRLLGEMRT------- 51
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
ASE + N + +++ L AC V G HG ++ G+ V ++L+ Y++G
Sbjct: 52 ASEAAPNEYT----LSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKG 107
Query: 237 GHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK-STDVKCNAVTLS 294
G + +R+VFDG + TWN++++ YA G +AL VF +M + + + T +
Sbjct: 108 GRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFA 167
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEES--VIVGTSIIDMYCKCGQVDLARKAFNQMK 352
++L A + LG R G +H + + I+ +++DMY KC ++ +A + F +++
Sbjct: 168 SLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLE 227
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
KNV WTA++ G+ + EAL+LF + ++G RP+ SV+ + LV++G
Sbjct: 228 RKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQG-R 286
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++ G + V +VD+ + G EA + M+ + V W +++ H
Sbjct: 287 QVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAP-NVVSWTTMVNGLGKH 345
Query: 473 KNVDLGEIAAKKLFE------LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
LG A LFE +EP+ Y LLS ++AG ++ R S ++ R +
Sbjct: 346 ---GLGREAV-ALFEEMRAGGVEPDEVTYLALLSAC-SHAGLVDECRRYFSCIRRDRTVR 400
Query: 527 T 527
Sbjct: 401 P 401
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/593 (37%), Positives = 337/593 (56%), Gaps = 52/593 (8%)
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
H+L++ KQ H Q G + S L++ SK + A +F+ IP + + +
Sbjct: 16 HNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFAS-TYAFTIFNHIPNP--TLFLYNT 72
Query: 147 MLTGYVQN-DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+++ + D A L+ L ++ + +S S+ AC+
Sbjct: 73 LISSLTHHSDQIHLAFSLYNHILTHKT-----------LQPNSFTFPSLFKACASHPWLQ 121
Query: 206 VTEGAHGFVIK---RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
H V+K +D V N+L++ YA+ G + VSR +FD + E D TWN+++A
Sbjct: 122 HGPPLHAHVLKFLQPPYDP--FVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLA 179
Query: 263 IYAQNG-------------LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
YAQ+ ++ EAL +F M + + +K N VTL A++ A ++LG L G
Sbjct: 180 AYAQSASHVSYSTSFEDADMSLEALHLFCDM-QLSQIKPNEVTLVALISACSNLGALSQG 238
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
H V++ +L+ + VGT+++DMY KCG ++LA + F+++ +++ + AMI G+ +H
Sbjct: 239 AWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVH 298
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
+AL+L+ M + P+ T V + ACSH GLV+EG +M +EP +EH
Sbjct: 299 GHGNQALELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEH 358
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
YGC++DLLGRAG+LKEA + ++ M +K + ++W SLLGA ++H N+++GE A K L ELE
Sbjct: 359 YGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELE 418
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
P G +VLLSN+YA+ GRW DV+R R LMK+ + K PGFSLVE+ G +H FL GDK H
Sbjct: 419 PETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTGDKAH 478
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
P ++IY + E+N +L E G+ + V+ DV++E+KE L HSE+LA
Sbjct: 479 PFSKEIYSKIGEINRRLLEYGHKPRTSEVLFDVEEEDKEDFLSYHSERLAIAFALIASSS 538
Query: 600 --------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH + +LIS R+I+VRD RFH+FKDG CSC DYW
Sbjct: 539 SMPIRIIKNLRVCGDCHAITKLISAAYQRDIIVRDRNRFHHFKDGSCSCLDYW 591
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 182/387 (47%), Gaps = 38/387 (9%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
LS + S + N +T T+FN ++ +F +N++I+ L D + AFS
Sbjct: 33 LSFQTYYLSHLLNTSSKFASTYAFTIFN-HIPNPTLFLYNTLISSLTHHSDQIHL--AFS 89
Query: 63 SMRKL----SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIF-GFHRDVFVSSALIDM 117
+ +L P TFP K+C++ L G H F D FV ++L++
Sbjct: 90 LYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPPLHAHVLKFLQPPYDPFVQNSLLNF 149
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN-------------DNAREALLLF 164
Y+K G+L +R LFD+I + ++ +W +ML Y Q+ D + EAL LF
Sbjct: 150 YAKYGKLCVSRYLFDQISE--PDLATWNTMLAAYAQSASHVSYSTSFEDADMSLEALHLF 207
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
+ L + + + V + +++SACS + AHG+V++
Sbjct: 208 CDMQLSQ------------IKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRF 255
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
VG L+D Y++ G ++++ ++FD + ++D +N++I +A +G +AL+++ M K
Sbjct: 256 VGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNM-KLE 314
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDL 343
D+ + T+ + A +H G++ G I + + + +E + +ID+ + G++
Sbjct: 315 DLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKE 374
Query: 344 ARKAFNQMKEK-NVRSWTAMIAGYGMH 369
A + M K N W +++ +H
Sbjct: 375 AEERLQDMPMKPNAILWRSLLGAAKLH 401
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 34/258 (13%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGD-------------SVEALRAFSSMRKLSLTPTRS 74
LF++ + + ++ +WN+++A A+ S+EAL F M+ + P
Sbjct: 162 LFDQ-ISEPDLATWNTMLAAYAQSASHVSYSTSFEDADMSLEALHLFCDMQLSQIKPNEV 220
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEI 134
T I +CS L L G AH + FV +AL+DMYSKCG L+ A +LFDE+
Sbjct: 221 TLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDEL 280
Query: 135 PQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASV 194
R+ + +M+ G+ + + +AL L++ LE+ + D I
Sbjct: 281 SD--RDTFCYNAMIGGFAVHGHGNQALELYRNMKLED------------LVPDGATIVVT 326
Query: 195 LSACSRVTVNGVTEGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHV-DVSRKVFDGMI 250
+ ACS + V EG F + G + ++ LID R G + + ++ D +
Sbjct: 327 MFACSHGGL--VEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPM 384
Query: 251 EKDAVTWNSIIAIYAQNG 268
+ +A+ W S++ +G
Sbjct: 385 KPNAILWRSLLGAAKLHG 402
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 15/156 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCS--- 84
LF++ D++ F +N++I A G +AL + +M+ L P +T + +CS
Sbjct: 276 LFDELSDRD-TFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDGATIVVTMFACSHGG 334
Query: 85 ----ALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRN 140
L S K H G + LID+ + G L +A + ++P + N
Sbjct: 335 LVEEGLEIFESMKGVH------GMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMK-PN 387
Query: 141 IVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
+ W S+L + N K + E E G
Sbjct: 388 AILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSG 423
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/551 (38%), Positives = 318/551 (57%), Gaps = 37/551 (6%)
Query: 114 LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
LI Y K G+L ARKLFDE+P R N+ +W +M+ G + E+L F F +
Sbjct: 6 LIGGYVKNGDLETARKLFDEMPAR--NVATWNAMVAGLTNSGLNEESLGFF--FAMRR-- 59
Query: 174 CGGASENSDNVFVDSVAIASVLSACS--RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLID 231
+ + D + S+ C+ R V+G H +V++ G D ++ VG++L
Sbjct: 60 --------EGMQPDEYGLGSLFRCCAGLRDVVSG--RQVHAYVVRSGLDRDMCVGSSLAH 109
Query: 232 AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
Y R G + + + V+ N+ I+ QNG A AL+ F M + V+ NAV
Sbjct: 110 MYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLM-RGAGVEANAV 168
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
T + + + + L L G+ IH IK +++ V V TS++ MY +CG + + + +
Sbjct: 169 TFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEY 228
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW 411
++ +AMI+ YG H ++A+ LF +M+ AG PN +TF+++L ACSH+GL EG
Sbjct: 229 SGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGM 288
Query: 412 HWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
+ M + ++P V+HY C+VDLLGR+G L EA DLI M V+ D V+W +LL AC+
Sbjct: 289 NCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKT 348
Query: 472 HKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFS 531
K D+ E A+++ EL+P++ +VLLSNI A + RWEDV + R M+ + + K PG S
Sbjct: 349 QKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVS 408
Query: 532 LVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTL 591
VEL+G++H F GD+ H + +I E LEE+ ++++ GY DM+ V HD++ EEKE++L
Sbjct: 409 WVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSL 468
Query: 592 RIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF 633
HSEKLA NLRVC DCH I+L+SKV+ REIVVRD RFH+F
Sbjct: 469 AHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHF 528
Query: 634 KDGLCSCGDYW 644
KDG CSCGDYW
Sbjct: 529 KDGKCSCGDYW 539
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 163/362 (45%), Gaps = 25/362 (6%)
Query: 22 NTNLTT---LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPC 78
N +L T LF++ + NV +WN+++A L G + E+L F +MR+ + P
Sbjct: 13 NGDLETARKLFDE-MPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGS 71
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
+ C+ L D+ SG+Q H G RD+ V S+L MY +CG L D +P
Sbjct: 72 LFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPS-- 129
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
NIVS + ++G QN +A AL F V ++V S +++C
Sbjct: 130 LNIVSCNTTISGRTQNGDAEGALEFF------------CLMRGAGVEANAVTFVSAVTSC 177
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
S + + H IK G D V V +L+ Y+R G + S +V D V +
Sbjct: 178 SDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCS 237
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVI 317
++I+ Y +G +A+ +F QM+ + + N VT +L A +H G+ G C
Sbjct: 238 AMISAYGFHGHGQKAVGLFKQMM-AAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTK 296
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREAL 376
L+ SV T I+D+ + G ++ A M + + W +++ C+ ++
Sbjct: 297 TYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA----CKTQKKF 352
Query: 377 DL 378
D+
Sbjct: 353 DM 354
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 6/202 (2%)
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
N LI Y + G ++ +RK+FD M ++ TWN+++A +GL E+L F M + +
Sbjct: 4 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAM-RREGM 62
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+ + L ++ A L + G+ +H V++ L+ + VG+S+ MY +CG +
Sbjct: 63 QPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEA 122
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
A + N+ S I+G + A AL+ F M AGV N +TFVS +++CS
Sbjct: 123 ALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAA 182
Query: 407 VQEGWHWLNTMGHEFNIEPGVE 428
+ +G H I+ GV+
Sbjct: 183 LAQGQQI-----HALAIKTGVD 199
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/519 (40%), Positives = 311/519 (59%), Gaps = 34/519 (6%)
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
NI + + L QN + A+ F + +S N+ N D SVL AC+
Sbjct: 54 NIFAHNATLKALAQNSHWFHAIQFFNHQV--------SSPNAPNP--DEFTFTSVLKACA 103
Query: 200 RVT--VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD--AV 255
+ VNG + H V K+GF+S + V N+LID Y + G++ ++R +FD M +D V
Sbjct: 104 GLAHVVNG--QKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVV 161
Query: 256 TWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQ 315
WN++IA YAQN ++A++VF M + V N VTL +VL A AHLG L LGK I
Sbjct: 162 CWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGF 221
Query: 316 VIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
+ + ++ + +G ++ DMY KCG + AR+ FN+M+E++V SW+ +I G M+ A EA
Sbjct: 222 ISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEA 281
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
FY+M+ G +PN + F+ +L+AC+HAGLV++G + NTM E+ + P VEHYGC+VD
Sbjct: 282 FGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVD 341
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGY 495
LL RAG+L +A D+I M +K + ++WG+LLG CRI+++ G+ + + EL+ ++ G
Sbjct: 342 LLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGS 401
Query: 496 HVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKI 555
+V L+N+Y++ GR +D + R M+ + KTPG S +E+ VH F +GD HP+ KI
Sbjct: 402 YVYLANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKI 461
Query: 556 YEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------- 599
Y + EL K++ GY V+H +D+EEKE L IHSEKLA
Sbjct: 462 YSMIRELMWKMKLAGYKPKTDLVVHSIDEEEKEDALSIHSEKLAIAFGLISTSEGTTIRV 521
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDG 636
NLR+C DCH ++IS +V REI+VRD RFH+FKDG
Sbjct: 522 VKNLRICNDCHDAAKIISGIVKREIIVRDRSRFHHFKDG 560
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 172/349 (49%), Gaps = 16/349 (4%)
Query: 21 TNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPC 78
N L ++ N+F+ N+ + LA+ A++ F+ + P TF
Sbjct: 38 ANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTS 97
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
+K+C+ L + +G++ H GF ++FV ++LIDMY K G L AR LFDE+ R
Sbjct: 98 VLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRD 157
Query: 139 RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC 198
RN+V W +M+ GY QN+ +A+ +F+ + GG N V + SVL AC
Sbjct: 158 RNVVCWNAMIAGYAQNEKYSDAIEVFRMM----QQFGGVVPN-------DVTLVSVLPAC 206
Query: 199 SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
+ + + + GF+ +R + +GN L D YA+ G + +R+VF+ M E+D ++W+
Sbjct: 207 AHLGALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWS 266
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVI 317
II A G A EA F +M+ + K N V +L A H G+++ G C +
Sbjct: 267 IIICGLAMYGHADEAFGCFYEMLDCGE-KPNDVVFMGLLTACTHAGLVKKGLNCFNTMDK 325
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAG 365
+ + V ++D+ + G++D A + M K NV W A++ G
Sbjct: 326 EYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGG 374
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/485 (41%), Positives = 298/485 (61%), Gaps = 22/485 (4%)
Query: 181 SDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
S NV + SV+ +C+ ++ + +G H + GF + V L+ Y++ G ++
Sbjct: 100 SSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDME 159
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
+R+VFD M EK V WNS+++ + QNGLA EA+ VF QM + + + ++ T ++L A
Sbjct: 160 GARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM-RESGFEPDSATFVSLLSAC 218
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
A G + LG +H +I L+ +V +GT++I++Y +CG V AR+ F++MKE NV +WT
Sbjct: 219 AQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWT 278
Query: 361 AMIAGYGMHCRAREALDLFYKMIK-AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH 419
AMI+ YG H ++A++LF KM G PN +TFV+VLSAC+HAGLV+EG M
Sbjct: 279 AMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTK 338
Query: 420 EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV---VWGSLLGACRIHKNVD 476
+ + PGVEH+ CMVD+LGRAG L EAY I + +W ++LGAC++H+N D
Sbjct: 339 SYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYD 398
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
LG AK+L LEP+N G+HV+LSNIYA +G+ ++V R M L K G+S++E+
Sbjct: 399 LGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVE 458
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
K + F +GD+ H + +IY YLE L + +E+GY V+H V++EEKE LR HSE
Sbjct: 459 NKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSE 518
Query: 597 KLA-----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
KLA NLR+C DCH+ + IS V +R+I VRD RFH+F++G CS
Sbjct: 519 KLAVAFGLLKTVDVAITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCS 578
Query: 640 CGDYW 644
C DYW
Sbjct: 579 CLDYW 583
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 176/336 (52%), Gaps = 19/336 (5%)
Query: 39 FSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQ 98
F +NSVI ++ + + + M +++P+ TF IKSC+ L L GK H
Sbjct: 73 FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCH 132
Query: 99 AFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAR 158
A + GF D +V +AL+ YSKCG++ AR++FD +P+ ++IV+W S+++G+ QN A
Sbjct: 133 AVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPE--KSIVAWNSLVSGFEQNGLAD 190
Query: 159 EALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG 218
EA+ +F + + ES DS S+LSAC++ + H ++I G
Sbjct: 191 EAIQVF--YQMRES----------GFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEG 238
Query: 219 FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFD 278
D V +G LI+ Y+R G V +R+VFD M E + W ++I+ Y +G +A+++F+
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFN 298
Query: 279 QMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCK 337
+M N VT AVL A AH G++ G+ ++ ++ K L V ++DM +
Sbjct: 299 KMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGR 358
Query: 338 CGQVDLARKAFNQM----KEKNVRSWTAMIAGYGMH 369
G +D A K +Q+ K WTAM+ MH
Sbjct: 359 AGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMH 394
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 115/220 (52%), Gaps = 19/220 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +K+ + +WNS+++ + G + EA++ F MR+ P +TF + +C+
Sbjct: 164 VFDRMPEKS-IVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTG 222
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ G HQ G +V + +ALI++YS+CG++ AR++FD++ + N+ +WT+M
Sbjct: 223 AVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKE--TNVAAWTAM 280
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ Y + ++A+ LF + E +CG N V +VLSAC+ + V
Sbjct: 281 ISAYGTHGYGQQAVELFNKM---EDDCGPIPNN--------VTFVAVLSACAHAGL--VE 327
Query: 208 EGAHGFV-IKRGFDSEVGVGN--TLIDAYARGGHVDVSRK 244
EG + + + + GV + ++D R G +D + K
Sbjct: 328 EGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYK 367
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/524 (41%), Positives = 300/524 (57%), Gaps = 32/524 (6%)
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
+ VSWT+++ Y+ +A EA+ + + + + DS VL+AC+
Sbjct: 5 STVSWTALIAAYMDAGHALEAIGVARRAF------------ASGMRPDSFTAVRVLTACA 52
Query: 200 RVTVNGVTEGAHGFVIKR-GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWN 258
RV E + G V V +D Y + G ++ +R VFD M +DAV W
Sbjct: 53 RVADLETGEAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWG 112
Query: 259 SIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK 318
+++ YA NG EALD+F M + K + T+ L A LG L LG+ V
Sbjct: 113 AMVGGYASNGHPREALDLFFAM-QMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHW 171
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
++ + ++GT++IDMY KCG A F QM E+++ W AMI G GM + A L
Sbjct: 172 DEVLGNPVLGTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFAL 231
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
+M K+GV+ N TF+ +L +C+H GLV +G + + M H + I P +EHYGCMVDL
Sbjct: 232 VGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFS 291
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVL 498
RAG L+EA+ LI M + A+ VVWG+LLG C+IH+N DL E A K+L LEP N G +V+
Sbjct: 292 RAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVM 351
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEY 558
LSNIY+N+GRWED + R MK + + K P S VEL GKVH F VGD HP +KIY
Sbjct: 352 LSNIYSNSGRWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAK 411
Query: 559 LEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------N 600
L+EL ++++ +GY V+ DV+ EEKE TL HSEK+A N
Sbjct: 412 LDELGMEMKAMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLITTEPGETIRVTKN 471
Query: 601 LRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
LRVC DCH+ I+LIS++ REIVVRD+ RFH F+DG CSC DYW
Sbjct: 472 LRVCTDCHSAIKLISRITCREIVVRDNNRFHCFRDGHCSCNDYW 515
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 179/381 (46%), Gaps = 46/381 (12%)
Query: 37 NVFSWNSVIADLARGGDSVEAL----RAFSS-MRKLSLTPTRSTFPCAIKSCSALHDLHS 91
+ SW ++IA G ++EA+ RAF+S MR S T R + +C+ + DL +
Sbjct: 5 STVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVR-----VLTACARVADLET 59
Query: 92 GKQ----AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+ A Q+ G VFV++A +D+Y KCGE+ AR +FDE+ R+ V+W +M
Sbjct: 60 GEAVWAAARQEE---GVAESVFVATAALDLYVKCGEMEKARSVFDEMKN--RDAVAWGAM 114
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY N + REAL LF +E ++ D + LSAC+R+ +
Sbjct: 115 VGGYASNGHPREALDLFFAMQMEGAK------------PDCYTVVGALSACTRLGALDLG 162
Query: 208 EGAHGFVIKRGFDSEVG---VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
A G V +D +G +G LID YA+ G + VF M+E+D + WN++I
Sbjct: 163 RQAVGMV---HWDEVLGNPVLGTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGL 219
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK-CIHDQVIKMDLEE 323
G A + QM KS VK N T +L + H G++ G+ H+ +
Sbjct: 220 GMTGHEKIAFALVGQMKKS-GVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISP 278
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ ++D++ + G ++ A + M N W A++ G +H A A ++
Sbjct: 279 RIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQL 338
Query: 383 IKAGVRP----NYITFVSVLS 399
I+ + P NY+ ++ S
Sbjct: 339 IR--LEPWNSGNYVMLSNIYS 357
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M V+W ++IA Y G A EA+ V + S ++ ++ T VL A A + L
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFAS-GMRPDSFTAVRVLTACARVADLET 59
Query: 309 GKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
G+ + + + + ESV V T+ +D+Y KCG+++ AR F++MK ++ +W AM+ GY
Sbjct: 60 GEAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYA 119
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGW------HWLNTMGHEF 421
+ REALDLF+ M G +P+ T V LSAC+ G + G HW +G
Sbjct: 120 SNGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLG--- 176
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
N G ++D+ + G EA+ + + M ++ D +VW +++
Sbjct: 177 NPVLGT----ALIDMYAKCGSTSEAWMVFQQM-LERDIIVWNAMI 216
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
M + SWTA+IA Y A EA+ + + +G+RP+ T V VL+AC+ ++ G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
E + V +DL + G++++A + + MK + D V WG+++G
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNR-DAVAWGAMVGG 117
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
++++ K + + +F + ++++ + WN++I L G A M+K +
Sbjct: 182 TALIDMYAKCGSTSEAWMVFQQMLERD-IIVWNAMILGLGMTGHEKIAFALVGQMKKSGV 240
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQA-HQQAFIFGFHRDVFVSSALIDMYSKCGELSDAR 128
+TF + SC+ ++ G+Q H ++ + ++D++S+ G L +A
Sbjct: 241 KLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAH 300
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
+L ++P + N V W ++L G + NA A K+ + E G N++ +S
Sbjct: 301 QLIGDMPM-LANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYSNS 359
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/548 (37%), Positives = 316/548 (57%), Gaps = 19/548 (3%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + K NV SW ++IA L G ++EAL FS M + TF A+K+ + LH
Sbjct: 216 KKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLH 275
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
GK H Q GF FV + L MY+KCG+ +LF+++ ++ ++VSWT+++T
Sbjct: 276 HGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKM--KMPDVVSWTTLITT 333
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
YVQ A+ FK NV + A+V+SAC+ + + E
Sbjct: 334 YVQKGEEEHAVEAFKRM------------RKSNVSPNKYTFAAVISACANLAIAKWGEQI 381
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG V++ G + V N+++ Y++ G + + VF G+ KD ++W++IIA+Y+Q G A
Sbjct: 382 HGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYA 441
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EA D M + K N LS+VL + +L GK +H V+ + ++ +V ++
Sbjct: 442 KEAFDYLSWM-RREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSA 500
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+I MY KCG V+ A K FN MK N+ SWTAMI GY H ++EA++LF K+ G++P+
Sbjct: 501 LISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPD 560
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
Y+TF+ VL+ACSHAG+V G+++ M +E+ I P EHYGC++DLL RAG+L EA +I
Sbjct: 561 YVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMI 620
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
M D VVW +LL +CR+H +VD G A++L L+PN+ G H+ L+NIYA GRW+
Sbjct: 621 RSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWK 680
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL---- 566
+ R LMK++ + K G+S V + K++AF+ GD+ HPQ E I LE L+ +
Sbjct: 681 EAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELLSANIGDAR 740
Query: 567 QEVGYVTD 574
QE+ + D
Sbjct: 741 QEIRSLND 748
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 224/450 (49%), Gaps = 27/450 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMR-KLSLTPTRSTFPCAIKSCSAL 86
+F+K ++ + SW ++IA DS EAL FS+M + L + A+K+C
Sbjct: 112 MFDKMTHRDEI-SWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLG 170
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
++ G+ H + G VFVSSALIDMY K G++ ++F ++ + RN+VSWT+
Sbjct: 171 VNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTK--RNVVSWTA 228
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ G V EALL F E + + V DS A L A + ++
Sbjct: 229 IIAGLVHAGYNMEALLYFSEMWISK------------VGYDSHTFAIALKASADSSLLHH 276
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H IK+GFD V NTL Y + G D ++F+ M D V+W ++I Y Q
Sbjct: 277 GKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQ 336
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
G A++ F +M KS +V N T +AV+ A A+L + + G+ IH V+++ L +++
Sbjct: 337 KGEEEHAVEAFKRMRKS-NVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALS 395
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
V SI+ +Y K G + A F+ + K++ SW+ +IA Y A+EA D M + G
Sbjct: 396 VANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREG 455
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGK 442
+PN SVLS C L+++G H + G++H + ++ + + G
Sbjct: 456 PKPNEFALSSVLSVCGSMALLEQG-----KQVHAHVLCIGIDHEAMVHSALISMYSKCGS 510
Query: 443 LKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
++EA + GMK+ + + W +++ H
Sbjct: 511 VEEASKIFNGMKIN-NIISWTAMINGYAEH 539
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 188/400 (47%), Gaps = 23/400 (5%)
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
+P + P C L + KQ + H + ++S L + K G+L +R
Sbjct: 55 SPLTYSSPGTATECREL--IQQAKQEQLAQNAYSVHNMLELNSELKQLV-KQGQLCKSRY 111
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FD++ R + +SWT+++ GYV ++ EAL+LF ++ + D
Sbjct: 112 MFDKMTHR--DEISWTTLIAGYVNASDSYEALILFSNMWVQP-----------GLQRDQF 158
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
I+ L AC E HGF +K G + V V + LID Y + G ++ +VF M
Sbjct: 159 MISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKM 218
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+++ V+W +IIA G EAL F +M S V ++ T + L A A +L G
Sbjct: 219 TKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWIS-KVGYDSHTFAIALKASADSSLLHHG 277
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K IH Q IK +ES V ++ MY KCG+ D + F +MK +V SWT +I Y
Sbjct: 278 KAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQK 337
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGH--EFNIEPGV 427
A++ F +M K+ V PN TF +V+SAC++ + + G GH + +
Sbjct: 338 GEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWG---EQIHGHVLRLGLVDAL 394
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+V L ++G LK A + G+ K D + W +++
Sbjct: 395 SVANSIVTLYSKSGLLKSASLVFHGITRK-DIISWSTIIA 433
>gi|356544972|ref|XP_003540920.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Glycine max]
Length = 622
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/583 (37%), Positives = 331/583 (56%), Gaps = 49/583 (8%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+K C+ L L GK H F F D+ + + ++ MY++CG L D + +F+E Q+
Sbjct: 71 LKRCTQLGKLKEGKLVHFHMFNSKFKDDLVIQNFVLFMYARCGNLKDTQHVFNEKLQK-- 128
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++V+WTSM++GY QN+ A++ L+LF L E ++ N F+ S I
Sbjct: 129 DMVTWTSMISGYAQNERAKDTLVLFPRILSEGTKL--------NXFILSSLI-------- 172
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
H G S V VG++L++ AR G++ VFD K+ V+WN+
Sbjct: 173 -----------HASCWMYGCHSNVFVGSSLVNMXARCGYLGEEXLVFDNSWCKNEVSWNA 221
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+I YA+ G EAL ++ +M + K T S +L + +G L GK + ++K
Sbjct: 222 LIGGYAKKGEGEEALALYLRM-QMEAYKPIQFTYSGILSSYLSMGCLEQGKWLLAHLMKP 280
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
+ V VG +++ MY K G++ K F+++ + +V S +M+ Y H +EA+ F
Sbjct: 281 GQKLVVYVGNTLLHMYAKLGKIRDVEKFFDKLVKVDVVSCNSMLTRYAQHGLGKEAMQQF 340
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
+MI G+ PN IT + VLS+CSHA L+ EG H+ M +++IEP V HY ++DLLG
Sbjct: 341 EEMISFGIEPNDITVLFVLSSCSHARLLDEGKHYFGLM-RKYSIEPKVSHYATIIDLLGX 399
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
AG L +A IE M ++ + G+LLG ++HKN +G AA+++FEL P+ G H LL
Sbjct: 400 AGLLDQAESFIEEMPIEPIVAIXGALLGDSKMHKNTKMGAYAAQQVFELNPSCRGTHTLL 459
Query: 500 SNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYL 559
N+YA+AGRW DV + +MK+ + K P S VE+ VH F+ D HPQ EKI++
Sbjct: 460 VNMYASAGRWGDVAKVIKIMKDSGVKKEPTCSXVEIENSVHVFVANDAAHPQKEKIHKMW 519
Query: 560 EELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NL 601
E+LN K++E+GYV D + V+ VDQ+EKE+ + H+EKLA N+
Sbjct: 520 EKLNQKIKEIGYVPDTSHVLLFVDQQEKELNFQYHTEKLALTLAFLNTPPRSTTRIMKNI 579
Query: 602 RVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
RV GDCH+ I ++ VV REI+VRD+ RFH+F+DG CSCGDYW
Sbjct: 580 RVSGDCHSSINYVALVVKREIIVRDTNRFHHFRDGFCSCGDYW 622
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 30/255 (11%)
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
++KR FDS + +L + D+S V D +++ + +
Sbjct: 1 MVKRHFDSFRTLWQSLSTIQSTFCDSDISAYVIDN---------KNLLRPSLNSKIGLHV 51
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
LD+ D + + + +L LG L+ GK +H + ++ +++ ++
Sbjct: 52 LDLID----CGSFELDLTLYNTLLKRCTQLGKLKEGKLVHFHMFNSKFKDDLVIQNFVLF 107
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
MY +CG + + FN+ +K++ +WT+MI+GY + RA++ L LF +++ G + N
Sbjct: 108 MYARCGNLKDTQHVFNEKLQKDMVTWTSMISGYAQNERAKDTLVLFPRILSEGTKLNXF- 166
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGM 453
+LS+ HA G H N+ G +V++ R G L E + +
Sbjct: 167 ---ILSSLIHASCWMYGCH--------SNVFVG----SSLVNMXARCGYLGEEXLVFDNS 211
Query: 454 KVKADFVVWGSLLGA 468
K + V W +L+G
Sbjct: 212 WCKNE-VSWNALIGG 225
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/637 (34%), Positives = 341/637 (53%), Gaps = 44/637 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ D N V S ++I+ A G +A+ FS M + P S + +KS
Sbjct: 138 LFDEMSDLNAV-SRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPR 196
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+Q H G + + + +++MY KCG L A+++FD++ ++ V+WT +
Sbjct: 197 ALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMA--VKKPVAWTGL 254
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY Q AR+AL LF + + E E DS + VL AC+ +
Sbjct: 255 MVGYTQAGRARDALKLFVDLITEGVE------------WDSFVFSVVLKACASLEELRFG 302
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H V K G + EV VG L+D Y + + + + F + E + V+W++II+ Y Q
Sbjct: 303 KQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQM 362
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
EA+ F + V N+ T +++ A + L +G +H IK L S
Sbjct: 363 SQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG 422
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+++I MY KCG +D A + F M ++ +WTA I+G+ + A EAL LF KM+ G+
Sbjct: 423 ESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGM 482
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+PN +TF++VL+ACSHAGLV++G H+L+TM ++N+ P ++HY CM+D+ R+G L EA
Sbjct: 483 KPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEAL 542
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
++ M + D + W L C HKN++LG+IA ++L +L+P + +VL N+Y AG
Sbjct: 543 RFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAG 602
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
+WE+ LM R L K S ++ +GK+H F+VGDK HPQ ++IYE L+E + ++
Sbjct: 603 KWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLKEFDGFME 662
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--------------------NLRVCGDC 607
+ MT E+ L HSE+LA NLR C DC
Sbjct: 663 GDMFQCSMT---------ERREQLLDHSERLAIAFGLISVNGNARAPIKVFKNLRACPDC 713
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H + +S V EIV+RDS+RFH+FK+G CSC DYW
Sbjct: 714 HEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 218/474 (45%), Gaps = 50/474 (10%)
Query: 45 IADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGF 104
+ L++ G EA F M K ++ + ++ C ++C L L G+ H + +
Sbjct: 53 LVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIE 112
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
+ V + + ++ MY +CG L DA KLFDE+ N VS T+M++ Y + +A+ LF
Sbjct: 113 NPSVLLQNCVLQMYCECGSLEDADKLFDEMSD--LNAVSRTTMISAYAEQGLLDKAVGLF 170
Query: 165 KEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVG 224
L E+ D S ++L + + H VI+ G S
Sbjct: 171 SRML----------ESGDK--PPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNAS 218
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+ +++ Y + G + +++VFD M K V W ++ Y Q G A +AL +F ++ +
Sbjct: 219 IETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLI-TE 277
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
V+ ++ S VL A A L LR GK IH V K+ LE V VGT ++D Y KC + A
Sbjct: 278 GVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESA 337
Query: 345 RKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM-IKAGVRPNYITFVSVLSACS- 402
+AF +++E N SW+A+I+GY + EA+ F + K V N T+ S+ ACS
Sbjct: 338 CRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSV 397
Query: 403 ----------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
HA ++ + +G ++ ++ + + G L +A+++ E
Sbjct: 398 LADCNIGGQVHADAIKR-----SLIGSQYG-------ESALITMYSKCGCLDDAHEVFES 445
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLS 500
M D V W + + + N A +LFE ++PN+ + +L+
Sbjct: 446 MD-NPDIVAWTAFISGHAYYGNAS----EALRLFEKMVSCGMKPNSVTFIAVLT 494
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/596 (36%), Positives = 337/596 (56%), Gaps = 54/596 (9%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+SVV+ + K +LF +++ +WNS+++ A+ EAL F+ M K
Sbjct: 90 NSVVTGLTKLGFLDEADSLFRSMPERDQC-TWNSMVSGFAQHDRCEEALCYFAMMHKEGF 148
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
+F + +CS L+D++ G Q H F DV++ SAL+DMYSKCG ++DA++
Sbjct: 149 VLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQR 208
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FDE+ R N+VSW S++T + QN A EAL +F+ L V D V
Sbjct: 209 VFDEMGDR--NVVSWNSLITCFEQNGPAVEALDVFQMML------------ESRVEPDEV 254
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
+ASV+SAC+ ++ V + HG V+K +++ + N +D YA+ + +R +FD
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 249 M-------------------------------IEKDAVTWNSIIAIYAQNGLAAEALDVF 277
M E++ V+WN++IA Y QNG EAL +F
Sbjct: 315 MPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF 374
Query: 278 DQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL------EESVIVGTSI 331
++K V + + +L A A L L LG H V+K E+ + VG S+
Sbjct: 375 -CLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSL 433
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
IDMY KCG V+ F +M E++ SW AMI G+ + EAL+LF +M+++G +P++
Sbjct: 434 IDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDH 493
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
IT + VLSAC HAG V+EG H+ ++M +F + P +HY CMVDLLGRAG L+EA +IE
Sbjct: 494 ITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIE 553
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
M ++ D V+WGSLL AC++H+N+ LG+ A+KL E+EP+N G +VLLSN+YA G+WED
Sbjct: 554 EMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWED 613
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
V R M+ + K PG S ++++G H F+V DK HP+ ++I+ L+ L +++
Sbjct: 614 VMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 134/432 (31%), Positives = 223/432 (51%), Gaps = 64/432 (14%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H GF ++F+ + LID YSKCG L D R++FD++PQ RNI +W S++TG
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQ--RNIYTWNSVVTGLT 97
Query: 153 QNDNAREALLLFKEFL-------------------LEESECGGASENSDNVFVDSVAIAS 193
+ EA LF+ EE+ C A + + ++ + AS
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 194 VLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
VLSACS +N + +G H + K F S+V +G+ L+D Y++ G+V+ +++VFD M +
Sbjct: 158 VLSACS--GLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD 215
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
++ V+WNS+I + QNG A EALDVF M++S V+ + VTL++V+ A A L +++G+
Sbjct: 216 RNVVSWNSLITCFEQNGPAVEALDVFQMMLESR-VEPDEVTLASVISACASLSAIKVGQE 274
Query: 312 IHDQVIKMD-LEESVIVGTSIIDMYCKCGQV----------------------------- 341
+H +V+K D L +I+ + +DMY KC ++
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 342 --DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
AR F +M E+NV SW A+IAGY + EAL LF + + V P + +F ++L
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 400 ACSHAGLVQEGWHW-LNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMK 454
AC+ + G ++ + H F + G E ++D+ + G ++E Y + M
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM- 453
Query: 455 VKADFVVWGSLL 466
++ D V W +++
Sbjct: 454 MERDCVSWNAMI 465
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 151/304 (49%), Gaps = 33/304 (10%)
Query: 185 FVDSVAIASVLSACSRVTVNGV-TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
F DS A +L +C + ++ + H VIK GF +E+ + N LIDAY++ G ++ R
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 244 KVFD-------------------------------GMIEKDAVTWNSIIAIYAQNGLAAE 272
+VFD M E+D TWNS+++ +AQ+ E
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL F M K V N + ++VL A + L + G +H + K V +G++++
Sbjct: 136 ALCYFAMMHKEGFV-LNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV 194
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG V+ A++ F++M ++NV SW ++I + + A EALD+F M+++ V P+ +
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
T SV+SAC+ ++ G + + + VD+ + ++KEA + +
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 453 MKVK 456
M ++
Sbjct: 315 MPIR 318
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/541 (38%), Positives = 330/541 (60%), Gaps = 15/541 (2%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ ++++ +WN +I+ + G +AL F M+K + P T + + + L+ + G
Sbjct: 308 MPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQG 367
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H H DVF+ SAL+D+Y KC + A+ ++D + ++V ++M++GYV
Sbjct: 368 KELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDS--SKAIDVVIGSTMISGYV 425
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
N ++EA+ +F+ +LLE+ + ++VAIASVL AC+ + + + H
Sbjct: 426 LNGMSQEAVKMFR-YLLEQ-----------GIRPNAVAIASVLPACASMAAMKLGQELHS 473
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ +K ++ V + L+D YA+ G +D+S +F + KD VTWNS+I+ +AQNG E
Sbjct: 474 YALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEE 533
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL++F +M VK + VT+S+VL A A L + GK IH VIK + + +++I
Sbjct: 534 ALNLFREMCME-GVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALI 592
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG ++ A + F M EKN SW ++IA YG + +E++ L M + G + +++
Sbjct: 593 DMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHV 652
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF++++SAC+HAG VQEG M E+ I P +EH+ CMVDL RAGKL +A +LI
Sbjct: 653 TFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVD 712
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M K D +WG+LL ACR+H+NV+L EIA+++LF+L+P+N GY+VL+SNI A AGRW+ V
Sbjct: 713 MPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGV 772
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
+ R LMK+ ++ K PG+S V++ H F+ DK HP E IY L+ + ++L+E GY+
Sbjct: 773 SKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGYI 832
Query: 573 T 573
Sbjct: 833 P 833
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 143/471 (30%), Positives = 231/471 (49%), Gaps = 38/471 (8%)
Query: 19 HSTNTNLTT-------LFNKYVDKNNVFS------------WNSVIADLARGGDSVEALR 59
H+T+T L T L ++ D VFS WN +I L GD AL
Sbjct: 71 HATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALL 130
Query: 60 AFSSM--RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM 117
+ M + P TFP +KSC+AL + G+ H+ A G D+FV SALI M
Sbjct: 131 FYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKM 190
Query: 118 YSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGA 177
Y+ G L DAR++FD + + R+ V W M+ GYV+ + A+ LF + G
Sbjct: 191 YANGGLLWDARQVFDGMAE--RDCVLWNVMMDGYVKAGSVSSAVELFGDM-----RASGC 243
Query: 178 SENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGG 237
N F SV SA GV H +K G +SEV V NTL+ YA+
Sbjct: 244 EPN----FATLACFLSV-SATESDLFFGVQ--LHTLAVKYGLESEVAVANTLVSMYAKCK 296
Query: 238 HVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL 297
+D K+F M D VTWN +I+ QNG +AL +F M KS ++ ++VTL ++L
Sbjct: 297 CLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKS-GIRPDSVTLVSLL 355
Query: 298 LAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
A+ L GK +H +++ + V + ++++D+Y KC V +A+ ++ K +V
Sbjct: 356 PALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVV 415
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
+ MI+GY ++ ++EA+ +F +++ G+RPN + SVL AC+ ++ G L++
Sbjct: 416 IGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQE-LHSY 474
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ E ++D+ + G+L ++ + + K D V W S++ +
Sbjct: 475 ALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAK-DEVTWNSMISS 524
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 150/323 (46%), Gaps = 13/323 (4%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFH-RDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
++ C + L G Q H +A G H D + + L+ MY DA +F +P+
Sbjct: 46 LRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGA 105
Query: 139 RNI-VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ W ++ G + R ALL + + S DS V+ +
Sbjct: 106 AACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSA----------PLPDSHTFPYVVKS 155
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C+ + + H G D ++ VG+ LI YA GG + +R+VFDGM E+D V W
Sbjct: 156 CAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLW 215
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N ++ Y + G + A+++F M +++ + N TL+ L A L G +H +
Sbjct: 216 NVMMDGYVKAGSVSSAVELFGDM-RASGCEPNFATLACFLSVSATESDLFFGVQLHTLAV 274
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
K LE V V +++ MY KC +D K F M ++ +W MI+G + +AL
Sbjct: 275 KYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALL 334
Query: 378 LFYKMIKAGVRPNYITFVSVLSA 400
LF M K+G+RP+ +T VS+L A
Sbjct: 335 LFCDMQKSGIRPDSVTLVSLLPA 357
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/674 (33%), Positives = 366/674 (54%), Gaps = 50/674 (7%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L++ +V S + H + LF+ ++N V +W +++ L F
Sbjct: 70 LTEGKAVQSAMYVPLLHRAARDARRLFDGMPERN-VVTWTALVTGYTLNSQPALGLEVFV 128
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
M ++ P+ T + +C A D+ GKQ H A +G + ++L +Y+K G
Sbjct: 129 EMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLG 188
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE-ALLLFKEFLLEESECGGASENS 181
L A + F IP++ N+++WT+M++ +++ E + LF + L+
Sbjct: 189 SLDSALRAFWRIPEK--NVITWTTMISACAEDEECVELGMSLFIDMLM------------ 234
Query: 182 DNVFVDSVAIASVLSAC-SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
D V + + SV+S C +R+ +N + + F K G ++ + V N+ + Y R G D
Sbjct: 235 DGVMPNEFTLTSVMSLCGTRLDLN-LGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETD 293
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQ------NGLAA-----EALDVFDQMVKSTDVKCN 289
+ ++F+ M + +TWN++I+ YAQ + L A +AL +F + +S +K +
Sbjct: 294 EAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSV-MKPD 352
Query: 290 AVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFN 349
T S++L + + L G+ IH Q IK V+V +++++MY KCG + A KAF
Sbjct: 353 LFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFL 412
Query: 350 QMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQE 409
+M + +WT+MI+GY H + +EA+ LF +M AGVRPN ITFVS+LSACS+AGLV+E
Sbjct: 413 EMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEE 472
Query: 410 GWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
H+ + M E+ IEP V+HYGCM+D+ R G++++A+ I+ + + +W SL+ C
Sbjct: 473 AEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGC 532
Query: 470 RIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPG 529
R H N++L AA KL EL+P ++LL N+Y + RW+DV R R LMK +
Sbjct: 533 RSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRD 592
Query: 530 FSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEM 589
S + ++ KV+ F D+ HPQ ++Y+ LE L K + +GY + + D + +EK
Sbjct: 593 RSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPA 652
Query: 590 --TLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
+L+ HSE+LA N+ +C DCH+ I+L S + +REI+VRDSKR
Sbjct: 653 AGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKR 712
Query: 630 FHYFKDGLCSCGDY 643
H FKDG CSCGD+
Sbjct: 713 LHKFKDGRCSCGDF 726
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/452 (42%), Positives = 288/452 (63%), Gaps = 21/452 (4%)
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+ K GFD+ + V N LI+AY G +DV+ K+FD M +D V+W+++I+ +N L AEA
Sbjct: 103 IFKLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEA 162
Query: 274 LDVFDQM-VKSTDVK--CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
L VF QM + D++ + + +V+ A++ LGV+ LG +H +++M + +V +GT+
Sbjct: 163 LSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTA 222
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+I+MY +CG +D + K F++M E+NV +WTA+I G +H R+REAL +FY+M ++G++P+
Sbjct: 223 LINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPD 282
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
F+ VL ACSH GLV++GW +M EF I+P +EHYGCMVDLLGRAG + EA+D +
Sbjct: 283 GALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFV 342
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
E M +K + V+W +LLGAC H ++ L E A +++ EL+P + G +VLLSN Y G W
Sbjct: 343 EEMPLKPNSVIWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNWG 402
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
R+ MK R+ K PG S V + VH F+ GD HPQ E+I ++L + ++ G
Sbjct: 403 GKAGLRNSMKQNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASIIDTVKLGG 462
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
Y + +SV+HD+ EEKE L HSEKLA NLR+C DCH ++
Sbjct: 463 YTPNTSSVLHDIQDEEKEHCLGYHSEKLAVAFVLLYHRDRRTIRVIKNLRICYDCHDFMK 522
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S + DR+I++RD RFH+F GLCSC D+W
Sbjct: 523 HASGIFDRDIIIRDRNRFHHFSKGLCSCQDFW 554
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 131/295 (44%), Gaps = 62/295 (21%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSM----RKLSLTPTRSTFPCAIKSCSALHDLH 90
+ ++ SW+++I+ L + EAL F M R + R+ I + S+L +
Sbjct: 140 RRDIVSWSTLISCLVKNNLPAEALSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIE 199
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G H G V + +ALI+MYS+CG + + K+FDE+P+ RN+V+WT+++ G
Sbjct: 200 LGIWVHSFIVRMGIVMTVPLGTALINMYSRCGLIDRSVKVFDEMPE--RNVVTWTALING 257
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
+ +REAL +F E ++ES + D VL ACS
Sbjct: 258 LAVHGRSREALKVFYE--MKES----------GLKPDGALFIGVLVACS----------- 294
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT-----WNSIIAIYA 265
HG +++ G+ +VF+ M ++ + + ++ +
Sbjct: 295 HGGLVEDGW------------------------RVFESMRDEFGIKPMLEHYGCMVDLLG 330
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD 320
+ GL EA D ++M +K N+V +L A + L L + +++I++D
Sbjct: 331 RAGLILEAFDFVEEM----PLKPNSVIWRTLLGACVNHNHLGLAEKARERIIELD 381
>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 970
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/637 (36%), Positives = 356/637 (55%), Gaps = 64/637 (10%)
Query: 32 YVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHS 91
++ + + SWNS+I L + +EA+ + SMR+ + P T +I SC++L
Sbjct: 374 FMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKL 433
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+Q H ++ G +V VS+AL+ +Y++ G L++ RK+F +P+ + VSW S++
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEH--DQVSWNSIIGAL 491
Query: 152 VQNDNA-REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
++ + EA+ F L + ++ + +SVLSA S ++ + +
Sbjct: 492 ASSERSLPEAVACFLNALRAGQK------------LNRITFSSVLSAVSSLSFGELGKQI 539
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK-DAVTWNSIIAIYAQNGL 269
HG +K E N LI Y + G +D K+F M E+ D VTWNS+I+ Y N L
Sbjct: 540 HGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNEL 599
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
A+ALD+ M++ T + ++ + VL A A + L G +H ++ LE V+VG+
Sbjct: 600 LAKALDLVWFMMQ-TGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGS 658
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM-IKAGVR 388
+++DMY KCG++D A + FN M LF M +
Sbjct: 659 ALVDMYSKCGRLDYALRFFNTMP-------------------------LFANMKLDGQTP 693
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+++TFV VLSACSHAGL++EG+ +M + + P +EH+ CM DLLGRAG+L + D
Sbjct: 694 PDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLED 753
Query: 449 LIEGMKVKADFVVWGSLLGAC-RIH-KNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
IE M +K + ++W ++LGAC R + + +LG+ AA+ LF+LEP N +VLL N+YA
Sbjct: 754 FIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAG 813
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
GRWED+ + R MK+ + K G+S V ++ VH F+ GDK HP + IY+ L+ELN K+
Sbjct: 814 GRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKM 873
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------------NLRVCGDC 607
++ GYV ++D++QE KE L HSEKLA NLRVCGDC
Sbjct: 874 RDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDC 933
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H+ + ISK+ R+I++RDS RFH+F+DG CSC D+W
Sbjct: 934 HSAFKHISKIEGRQIILRDSNRFHHFQDGECSCSDFW 970
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 215/445 (48%), Gaps = 30/445 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL--HDLH 90
V N SWNS+I+ ++ GD A + F SM+ PT TF + + +L D+
Sbjct: 166 VQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVR 225
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+Q GF D+FV S L+ ++K G L ARK+F+++ RN V+ ++ G
Sbjct: 226 LLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQM--ETRNAVTLNGLMVG 283
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD-----SVAIASVLSACSRVTVNG 205
V+ EA LF + N +D V + S S G
Sbjct: 284 LVRQKWGEEATKLFMDM---------------NSMIDVSPESYVILLSSFPEYSLAEEVG 328
Query: 206 VTEG--AHGFVIKRGF-DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ +G HG VI G D VG+GN L++ YA+ G + +R+VF M EKD+V+WNS+I
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMIT 388
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
QN EA++ + M + ++ + TL + + + A L +LG+ IH + +K+ ++
Sbjct: 389 GLDQNSCFIEAVERYQSM-RRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGID 447
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA-REALDLFYK 381
+V V +++ +Y + G ++ RK F+ M E + SW ++I R+ EA+ F
Sbjct: 448 LNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLN 507
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
++AG + N ITF SVLSA S + G ++ + ++NI ++ G+ G
Sbjct: 508 ALRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IHGLALKYNIADEATTENALIACYGKCG 566
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLL 466
++ + M + D V W S++
Sbjct: 567 EMDGCEKIFSRMSERRDDVTWNSMI 591
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 209/440 (47%), Gaps = 23/440 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD--LHSGKQ 94
N SW V++ +R G+ EAL M K + F A+++C L + G+Q
Sbjct: 66 NCVSWACVVSGYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQ 125
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCG-ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H F + D VS+ LI MY KCG L A + FD++ +++N VSW S+++ Y Q
Sbjct: 126 IHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYALRAFDDV--QVKNSVSWNSIISVYSQ 183
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN-GVTEGAHG 212
+ R A +F +C G S ++ F + V +ACS + + E
Sbjct: 184 TGDQRFAFKMFYSM-----QCDG-SRPTEYTFG-----SLVTTACSLTEPDVRLLEQIMC 232
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ K GF +++ VG+ L+ A+A+ G + +RK+F+ M ++AVT N ++ + E
Sbjct: 233 TIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEE 292
Query: 273 ALDVFDQMVKSTDVKCNAVTL---SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI-VG 328
A +F M DV + + S ++A L+ G+ +H VI L + ++ +G
Sbjct: 293 ATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIG 352
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
+++MY KCG + AR+ F M EK+ SW +MI G + EA++ + M + +
Sbjct: 353 NGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEIL 412
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P T +S +S+C+ + G ++ + I+ V ++ L G L E
Sbjct: 413 PGSFTLISSISSCASLKWAKLG-QQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRK 471
Query: 449 LIEGMKVKADFVVWGSLLGA 468
+ M + D V W S++GA
Sbjct: 472 IFSSMP-EHDQVSWNSIIGA 490
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 188/410 (45%), Gaps = 39/410 (9%)
Query: 72 TRSTFPCAIKSCSALHDLHSG--KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
T+S ++SC H G K H + + G +DV++ + LI+ Y + G+ ARK
Sbjct: 2 TKSVPLSFVQSCIG----HRGAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARK 57
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FDE+P +RN VSW +++GY +N +EAL+ ++ + E VF +
Sbjct: 58 VFDEMP--LRNCVSWACVVSGYSRNGEHKEALVFLRDMVKE------------GVFSNHY 103
Query: 190 AIASVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYAR-GGHVDVSRKVF 246
A S L AC + G+ G HG + K + + V N LI Y + GG + + + F
Sbjct: 104 AFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYALRAF 163
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM----VKSTDVKCNAVTLSAVLLAIAH 302
D + K++V+WNSII++Y+Q G A +F M + T+ ++ +A L
Sbjct: 164 DDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPD 223
Query: 303 LGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
+ +L C + K + VG+ ++ + K G + ARK FNQM+ +N + +
Sbjct: 224 VRLLEQIMCT---IQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGL 280
Query: 363 IAGYGMHCRAREALDLFYKMIKA-GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
+ G EA LF M V P ++V +LS+ L +E H
Sbjct: 281 MVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGH 338
Query: 422 NIEPGVEHY-----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
I G+ + +V++ + G + +A + M K D V W S++
Sbjct: 339 VITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEK-DSVSWNSMI 387
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/589 (37%), Positives = 328/589 (55%), Gaps = 45/589 (7%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K NV SW ++IA + G EAL F M + P T A+ +C+ L L G++
Sbjct: 324 KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGRE 383
Query: 95 AHQQAF-IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H + D+ V ++L+D Y+KC + AR+ F I Q ++VSW +ML GY
Sbjct: 384 IHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQT--DLVSWNAMLAGYAL 441
Query: 154 NDNAREALLLFKEFLLEESE---------CGGASENSDN--------------VFVDSVA 190
+ EA+ L E + E G ++ D + ++
Sbjct: 442 RGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTT 501
Query: 191 IASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
I+ L+AC +V + + HG+V++ + GVG+ LI Y+ ++V+ VF +
Sbjct: 502 ISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS 561
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK 310
+D V WNSII+ AQ+G + ALD+ +M ++V+ N VT+ + L A + L LR GK
Sbjct: 562 TRDVVVWNSIISACAQSGRSVNALDLLREM-NLSNVEVNTVTMVSALPACSKLAALRQGK 620
Query: 311 CIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
IH +I+ L+ + S+IDMY +CG + +R+ F+ M ++++ SW MI+ YGMH
Sbjct: 621 EIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHG 680
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
+A++LF G++PN+ITF ++LSACSH+GL++EGW + M E+ ++P VE Y
Sbjct: 681 FGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQY 740
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
CMVDLL RAG+ E + IE M + + VWGSLLGACRIH N DL E AA+ LFELEP
Sbjct: 741 ACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEP 800
Query: 491 NNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHP 550
+ G +VL++NIY+ AGRWED + R LMK R + K PG S +E++ K+H+F+VGD HP
Sbjct: 801 QSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHP 860
Query: 551 QHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
E+I +L DVD++EKE +L HSEK+A
Sbjct: 861 LMEQISGKDGKL------------------DVDEDEKEFSLCGHSEKIA 891
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 151/575 (26%), Positives = 259/575 (45%), Gaps = 113/575 (19%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K ++N VFSW +++ GD E ++ F M + P FP K+CS L
Sbjct: 146 MFDKMSERN-VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK 204
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR---IRNI--- 141
+ GK + GF + V +++DM+ KCG + AR+ F+EI + + NI
Sbjct: 205 NYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVS 264
Query: 142 ---------------------------VSWTSMLTGYVQNDNAREALLLFKEF------- 167
V+W ++++GY Q+ EA F E
Sbjct: 265 GYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFK 324
Query: 168 --------LLEESECGGASENSDNVF---------VDSVAIASVLSACSRVTVNGVTEGA 210
L+ SE G + +VF +S+ IAS +SAC+ +++
Sbjct: 325 PNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 384
Query: 211 HGFVIK-RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG+ IK DS++ VGN+L+D YA+ V+V+R+ F + + D V+WN+++A YA G
Sbjct: 385 HGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGS 444
Query: 270 AAEALDVFDQM----------------------------------VKSTDVKCNAVTLSA 295
EA+++ +M + S + N T+S
Sbjct: 445 HEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISG 504
Query: 296 VLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN 355
L A + L+LGK IH V++ +E S VG+++I MY C +++A F+++ ++
Sbjct: 505 ALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRD 564
Query: 356 VRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLN 415
V W ++I+ R+ ALDL +M + V N +T VS L ACS +++G
Sbjct: 565 VVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEI-- 622
Query: 416 TMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRI 471
H+F I G++ ++D+ GR G ++++ + + M + D V W ++ +
Sbjct: 623 ---HQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR-DLVSWNVMISVYGM 678
Query: 472 HKNVDLGEIAAKKLFE------LEPNNCGYHVLLS 500
H G + A LF+ L+PN+ + LLS
Sbjct: 679 H---GFG-MDAVNLFQXFRTMGLKPNHITFTNLLS 709
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 216/497 (43%), Gaps = 89/497 (17%)
Query: 20 STNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCA 79
STNT L K + + S + R G A SSM + +
Sbjct: 37 STNTKTQNL-RKLTNARQRITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASI 95
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++ C L++L G Q H Q + G F+ S L+++Y + G + DAR++FD++ + R
Sbjct: 96 LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE--R 153
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+ SWT+++ Y + E + LF + ++ V D V ACS
Sbjct: 154 NVFSWTAIMEMYCGLGDYEETIKLFYLMV------------NEGVRPDHFVFPKVFKACS 201
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM---------- 249
+ V + + +++ GF+ V +++D + + G +D++R+ F+ +
Sbjct: 202 ELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNI 261
Query: 250 -------------------------IEKDAVTWNSIIAIYAQ------------------ 266
++ D VTWN+II+ YAQ
Sbjct: 262 MVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLK 321
Query: 267 ------------------NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
NG EAL VF +MV VK N++T+++ + A +L +LR
Sbjct: 322 DFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE-GVKPNSITIASAVSACTNLSLLRH 380
Query: 309 GKCIHDQVIKM-DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
G+ IH IK+ +L+ ++VG S++D Y KC V++AR+ F +K+ ++ SW AM+AGY
Sbjct: 381 GREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYA 440
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
+ EA++L +M G+ P+ IT+ +++ + G + + M H ++P
Sbjct: 441 LRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM-HSMGMDPNT 499
Query: 428 EHYGCMVDLLGRAGKLK 444
+ G+ LK
Sbjct: 500 TTISGALAACGQVRNLK 516
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 148/288 (51%), Gaps = 18/288 (6%)
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
AS+L C ++ + H ++ G D +G+ L++ Y + G V+ +R++FD M E
Sbjct: 93 ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
++ +W +I+ +Y G E + +F MV + V+ + V A + L R+GK
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMV-NEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
++D ++ + E + V SI+DM+ KCG++D+AR+ F +++ K+V W M++GY
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG 431
++AL M +GV+P+ +T+ +++S + +G +E + MG + +P V +
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWT 331
Query: 432 CMVDLLGRAGKLKEAYD----------LIEGMKVKADFVVWGSLLGAC 469
++ AG + YD ++EG VK + + S + AC
Sbjct: 332 ALI-----AGSEQNGYDFEALSVFRKMVLEG--VKPNSITIASAVSAC 372
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/593 (35%), Positives = 344/593 (58%), Gaps = 39/593 (6%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S++ ++ N LF++ + ++ SWN++I+ + G++ EAL + +R +
Sbjct: 122 ASLIHLYSRYKAVGNARILFDE-MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDS 180
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
T + +C+ D + G H + G ++ L D +K
Sbjct: 181 V----TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL---------------LRDCQK 221
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE--ESECGGASENSDNVFVD 187
+FD + +R+++SW S++ Y N+ A+ LF+E L + +C +
Sbjct: 222 VFDRM--YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC-----------LT 268
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVF 246
+++AS+LS + GF +++G F ++ +GN ++ YA+ G VD +R VF
Sbjct: 269 LISLASILSQLGDIRA---CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 325
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ + D ++WN+II+ YAQNG A+EA+++++ M + ++ N T +VL A + G L
Sbjct: 326 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 385
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
R G +H +++K L V V TS+ DMY KCG+++ A F Q+ N W +IA +
Sbjct: 386 RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACH 445
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
G H +A+ LF +M+ GV+P++ITFV++LSACSH+GLV EG M ++ I P
Sbjct: 446 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPS 505
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
++HYGCMVD+ GRAG+L+ A I+ M ++ D +WG+LL ACR+H NVDLG+IA++ LF
Sbjct: 506 LKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLF 565
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
E+EP + GYHVLLSN+YA+AG+WE V+ RS+ + L KTPG+S +E+ KV F G+
Sbjct: 566 EVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGN 625
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA 599
+ HP +E++Y L L KL+ +GYV D V+ DV+ +EKE L HSE+LA
Sbjct: 626 QTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLA 678
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 152/497 (30%), Positives = 258/497 (51%), Gaps = 52/497 (10%)
Query: 14 SNVDKH---STNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS-SMRKLSL 69
NV H S N + F+ ++ +V++WN +I+ R G+S E +R FS M L
Sbjct: 24 PNVSTHVSLSPNKSKMHTFD-HIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGL 82
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
TP TFP +K+C + D G + H A FGF DV+V+++LI +YS+ + +AR
Sbjct: 83 TPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARI 139
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
LFDE+P +R++ SW +M++GY Q+ NA+EAL L +DSV
Sbjct: 140 LFDEMP--VRDMGSWNAMISGYCQSGNAKEALTLSNGLRA----------------MDSV 181
Query: 190 AIASVLSACSRVT--VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
+ S+LSAC+ GVT H + IK G +SE+ L D +KVFD
Sbjct: 182 TVVSLLSACTEAGDFNRGVT--IHSYSIKHGLESEL-----LRDC----------QKVFD 224
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
M +D ++WNSII Y N A+ +F +M + + ++ + +TL ++ ++ LG +R
Sbjct: 225 RMYVRDLISWNSIIKAYELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGDIR 283
Query: 308 LGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
+ + ++ E + +G +++ MY K G VD AR FN + +V SW +I+GY
Sbjct: 284 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 343
Query: 367 GMHCRAREALDLFYKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
+ A EA++++ M + G + N T+VSVL ACS AG +++G L+ + +
Sbjct: 344 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK-LHGRLLKNGLYL 402
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
V + D+ G+ G+L++A L + + + V W +L+ H + + + K++
Sbjct: 403 DVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEM 461
Query: 486 FE--LEPNNCGYHVLLS 500
+ ++P++ + LLS
Sbjct: 462 LDEGVKPDHITFVTLLS 478
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 32/277 (11%)
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
FD + +D WN +I+ Y + G ++E + F + S+ + + T +VL A
Sbjct: 41 TFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--- 97
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
+ G IH +K V V S+I +Y + V AR F++M +++ SW AMI+
Sbjct: 98 TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 157
Query: 365 GYGMHCRAREALDLFYKMIKAGVRP-NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
GY A+EAL L G+R + +T VS+LSAC+ AG G H ++I
Sbjct: 158 GYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRG-----VTIHSYSI 207
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNV--DLGEIA 481
+ G+E + L++ + + M V+ D + W S++ A +++ +
Sbjct: 208 KHGLE-----------SELLRDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAISLFQ 255
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSL 518
+L ++P +C + L++I + G D+ RS+
Sbjct: 256 EMRLSRIQP-DCLTLISLASILSQLG---DIRACRSV 288
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/634 (35%), Positives = 351/634 (55%), Gaps = 57/634 (8%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAI--KSCSALHDLHSGKQAHQQA 99
NS + L++ G EALR S S CA+ SC + L G++ + Q
Sbjct: 34 NSTLKSLSKSGKLDEALRLIESWPSKSPATAPDVEACALFLHSCISRKALEHGQRLYLQL 93
Query: 100 FIF------GFHRDVFVSSALIDMYSKCGELSDARKLFDE------IPQRIRNIVSWTSM 147
++ + + LI ++S CG + +AR++F++ +P+ + W +M
Sbjct: 94 LLYRDRCNHNLLNNPTLKGKLITLFSVCGRVDEARRVFEDGGEDVDLPESV-----WVAM 148
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
GY +N +EALLL+ E + + + G + A + L ACS +
Sbjct: 149 GIGYSRNGYPKEALLLYYEMVCQFGQLG------------NFAFSMALKACSDLGDLRTG 196
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H V+K D + V N L+ Y+ G + + ++FDGM ++ V+WNS+IA +
Sbjct: 197 RAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKK 256
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
EA++ F ++++ + + VTL+ +L A + L GK IH ++K + V
Sbjct: 257 EGVFEAIEAF-RIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPV 315
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
S++DMY KCG +D R+ FN M+ K++ SW +I GY ++ R EA++ F +MI +G
Sbjct: 316 LNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGF 375
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
P+ ITF+++LS CSHAGL +G M + I P VEHY C+VD+LGRAG++KEA
Sbjct: 376 SPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAGRIKEAL 435
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
++++ M K +WGSLL +CR+H NV L E AK+LFELEPNN G +V+LSNIYANAG
Sbjct: 436 EIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAG 495
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD----KEHPQHEKIYEYLEELN 563
WE V+ R M+ R + K G S ++++ K+H F+ G + +++K+++ L E
Sbjct: 496 MWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVWKRLME-- 553
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
++EVGYV D V+HDV +E + M + HSE+LA NLRVC
Sbjct: 554 -AMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKNLRVCV 612
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
DCH+ ++ +SKV R IV+RD+ RFH+FKDG+CS
Sbjct: 613 DCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCS 646
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 20/229 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N+ SWNS+IA L + EA+ AF M+ + + T + C+ + L SGK+ H
Sbjct: 242 NLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIH 301
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
D V ++L+DMY+KCG + R++F+ + + +++ SW +++TGY N
Sbjct: 302 AVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGM--QGKDLTSWNTLITGYAINGR 359
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EA+ F+E + C G S D + ++LS CS + +G F +
Sbjct: 360 MTEAMESFQEMI-----CSGFSP-------DGITFIALLSGCSHAGL--ADDGCRLFEMM 405
Query: 217 R---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT-WNSII 261
+ G V L+D R G + + ++ M K + W S++
Sbjct: 406 KMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLL 454
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/435 (43%), Positives = 280/435 (64%), Gaps = 19/435 (4%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
+I YA+ G+V+ +R +FD M E+D V+WN +I YAQ+G +AL +F +++ K
Sbjct: 198 MITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKP 257
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+ +T+ A L A + +G L G+ IH V + +V V T +IDMY KCG ++ A F
Sbjct: 258 DEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVF 317
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK-AGVRPNYITFVSVLSACSHAGLV 407
N K++ +W AMIAGY MH +++AL LF +M G++P ITF+ L AC+HAGLV
Sbjct: 318 NDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLV 377
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
EG +MG E+ I+P +EHYGC+V LLGRAG+LK AY+ I+ M + AD V+W S+LG
Sbjct: 378 NEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLG 437
Query: 468 ACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKT 527
+C++H + LG+ A+ L L N G +VLLSNIYA+ G +E V + R+LMK + + K
Sbjct: 438 SCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKE 497
Query: 528 PGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEK 587
PG S +E+ KVH F GD+EH + ++IY L +++ +++ GYV + +V+ D+++ EK
Sbjct: 498 PGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEK 557
Query: 588 EMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKR 629
E +L++HSE+LA NLRVC DCHTV +LISK+ R+IV+RD R
Sbjct: 558 EQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNR 617
Query: 630 FHYFKDGLCSCGDYW 644
FH+F DG CSCGD+W
Sbjct: 618 FHHFTDGSCSCGDFW 632
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 176/380 (46%), Gaps = 61/380 (16%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ +D + +F + + I + G +A + + + P TF +KSCS
Sbjct: 86 LFHQTIDPD-LFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST-- 142
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI--------- 138
SGK H FG D +V++ L+D+Y+K G++ A+K+FD +P+R
Sbjct: 143 --KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 200
Query: 139 --------------------RNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
R+IVSW M+ GY Q+ +AL+LF++ L E G
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE-----GKP 255
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
+ D + + + LSACS++ H FV V V LID Y++ G
Sbjct: 256 KP------DEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
++ + VF+ KD V WN++IA YA +G + +AL +F++M T ++ +T L
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 299 AIAHLGVLRLGKCIHDQV-----IKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
A AH G++ G I + + IK +E ++ + + GQ+ ++A+ +K
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHY----GCLVSLLGRAGQL---KRAYETIKN 422
Query: 354 KNVRS----WTAMIAGYGMH 369
N+ + W++++ +H
Sbjct: 423 MNMDADSVLWSSVLGSCKLH 442
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 39/273 (14%)
Query: 232 AYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV 291
AYA G + S +F I+ D + + I + NGL +A ++ Q++ S+++ N
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLL-SSEINPNEF 131
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDL------------------------------ 321
T S++L + + + GK IH V+K L
Sbjct: 132 TFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 322 -EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
E S++ T++I Y K G V+ AR F+ M E+++ SW MI GY H +AL LF
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 381 KMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
K++ G +P+ IT V+ LSACS G ++ G W++ I V+ ++D+ +
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETG-RWIHVFVKSSRIRLNVKVCTGLIDMYSK 306
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G L+EA L+ + D V W +++ +H
Sbjct: 307 CGSLEEAV-LVFNDTPRKDIVAWNAMIAGYAMH 338
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/637 (35%), Positives = 346/637 (54%), Gaps = 34/637 (5%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++F ++ S ++I R G + AL + MR L P T+ + +CS+
Sbjct: 124 SVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSP 183
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L GK H+ ++ V +ALI MY+KCG L D++ LF + ++++VSW +
Sbjct: 184 DFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLF--LTMDVKDVVSWNA 241
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M+ Y + ++A LF ++ +++ +S+L AC+
Sbjct: 242 MIAAYTLYGHDKDAFSLFHRMC--------TLGHTPDIYT----FSSILGACASPKRLED 289
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
H + RGFD + + N LI + R G ++ +R+ F + +K+ WN+++A YAQ
Sbjct: 290 GRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQ 349
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
+AL ++ M+ + T S+V+ + A LG LR GK IH+ E+ VI
Sbjct: 350 FDKGKDALFLYKNMLLE-GFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVI 408
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
+GT++++MY KCG + A+K+F+ + K+V SW+AMIA H A EAL+L + M G
Sbjct: 409 LGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQG 468
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+ N +T SVL ACSH G + EG + + +F IE E+ +DLLGRAG LKEA
Sbjct: 469 IAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEA 528
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANA 506
++ M K FV +LLG C++H +V G+ K++ LEP N G +VLL+N+YA A
Sbjct: 529 EHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAA 588
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
GRW+DV + R M+ + + + G S +E R K++ F VGD +P++ +I LE L ++
Sbjct: 589 GRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRM 648
Query: 567 -QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
+E GYV D V HDV ++KE L+ HSEK+A NLRVC DC
Sbjct: 649 KEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDC 708
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
HTV +L SK+ R I+VRD RFH+F+ G+CSCGDYW
Sbjct: 709 HTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 745
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 216/444 (48%), Gaps = 16/444 (3%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + N FSW+ ++ + EAL + M + ++ T + +C+ L D+ G
Sbjct: 28 IKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKEISIDAYTLSSVLAACTKLLDVEEG 87
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ ++A GF +DV V+++LI +++KCG L +A +F + +R+I+S T+M+ YV
Sbjct: 88 RMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGA-MRDIISVTAMIGAYV 146
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
++ AL + + S + D+ A++L ACS + H
Sbjct: 147 RHGKNDLALDTYWKM------------RSQGLEPDAFTYAAILGACSSPDFLLDGKHIHK 194
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+++ + V N LI YA+ G + S+ +F M KD V+WN++IA Y G +
Sbjct: 195 HILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKD 254
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A +F +M + T S++L A A L G+ +H ++ + + ++I
Sbjct: 255 AFSLFHRMCTLGHTP-DIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLI 313
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
M+ +CG ++ AR+ F +++K + +W M+A Y + ++AL L+ M+ G P+
Sbjct: 314 SMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRF 373
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF SV+ +C+ G ++EG +++ E V +V++ + G L +A +G
Sbjct: 374 TFSSVVDSCASLGALREG-KFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDG 432
Query: 453 MKVKADFVVWGSLLGACRIHKNVD 476
+ K D V W +++ A H + +
Sbjct: 433 ISNK-DVVSWSAMIAASAQHGHAE 455
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 196/369 (53%), Gaps = 30/369 (8%)
Query: 107 DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKE 166
D F+++ +I MY KC DAR++FD I Q RN SW+ ++ YVQN +EAL ++KE
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQ--RNAFSWSILVECYVQNAMYQEALEVYKE 58
Query: 167 FLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR-----GFDS 221
+ +E + +D+ ++SVL+AC+++ V EG +++R GF+
Sbjct: 59 MVRKE------------ISIDAYTLSSVLAACTKLL--DVEEGR---MVQRKAEELGFEK 101
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
+V V +LI +A+ G ++ + VF M +D ++ ++I Y ++G ALD + +M
Sbjct: 102 DVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKM 161
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
+S ++ +A T +A+L A + L GK IH +++ ++ V ++I MY KCG
Sbjct: 162 -RSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGS 220
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+ ++ F M K+V SW AMIA Y ++ ++A LF++M G P+ TF S+L A
Sbjct: 221 LKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGA 280
Query: 401 CSHAGLVQEGWHW-LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
C+ +++G + F+ + +++ ++ + R G L+ A ++ K +
Sbjct: 281 CASPKRLEDGRMLHVRITARGFDRDFAMQNN--LISMFTRCGSLESARRYFYSIE-KKEL 337
Query: 460 VVWGSLLGA 468
W ++L A
Sbjct: 338 GAWNTMLAA 346
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 139/255 (54%), Gaps = 16/255 (6%)
Query: 225 VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST 284
+ N +I Y + + +R+VFD + +++A +W+ ++ Y QN + EAL+V+ +MV+
Sbjct: 4 LANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRK- 62
Query: 285 DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLA 344
++ +A TLS+VL A L + G+ + + ++ E+ V+V TS+I ++ KCG ++ A
Sbjct: 63 EISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEA 122
Query: 345 RKAFNQMKE-KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
F M +++ S TAMI Y H + ALD ++KM G+ P+ T+ ++L ACS
Sbjct: 123 ESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSS 182
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGVEHYG------CMVDLLGRAGKLKEAYDLIEGMKVKA 457
+ +G H H+ +E +H+G ++ + + G LK++ L M VK
Sbjct: 183 PDFLLDGKHI-----HKHILES--KHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVK- 234
Query: 458 DFVVWGSLLGACRIH 472
D V W +++ A ++
Sbjct: 235 DVVSWNAMIAAYTLY 249
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 3/171 (1%)
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
II MY KC + AR+ F+++K++N SW+ ++ Y + +EAL+++ +M++ + +
Sbjct: 8 IIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKEISID 67
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
T SVL+AC+ V+EG + E E V ++ L + G L+EA +
Sbjct: 68 AYTLSSVLAACTKLLDVEEG-RMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVF 126
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE--LEPNNCGYHVLL 499
M D + +++GA H DL K+ LEP+ Y +L
Sbjct: 127 RSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAIL 177
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/667 (33%), Positives = 365/667 (54%), Gaps = 50/667 (7%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S+V+ + S + LF+ ++N V +W +++ L F M ++
Sbjct: 117 TSLVNAYMRCSAARDARRLFDGMPERN-VVTWTALVTGYTLNSQPALGLEVFVEMLEMGR 175
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
P+ T + +C A D+ GKQ H A +G + ++L +Y+K G L A +
Sbjct: 176 YPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALR 235
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNARE-ALLLFKEFLLEESECGGASENSDNVFVDS 188
F IP++ N+++WT+M++ +++ E + LF + L+ D V +
Sbjct: 236 AFWRIPEK--NVITWTTMISACAEDEECVELGMSLFIDMLM------------DGVMPNE 281
Query: 189 VAIASVLSAC-SRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
+ SV+S C +R+ +N + + F K G ++ + V N+ + Y R G D + ++F+
Sbjct: 282 FTLTSVMSLCGTRLDLN-LGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFE 340
Query: 248 GMIEKDAVTWNSIIAIYAQ------NGLAA-----EALDVFDQMVKSTDVKCNAVTLSAV 296
M + +TWN++I+ YAQ + L A +AL +F + +S +K + T S++
Sbjct: 341 QMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSV-MKPDLFTFSSI 399
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L + + L G+ IH Q IK V+V +++++MY KCG + A KAF +M +
Sbjct: 400 LSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTF 459
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
+WT+MI+GY H + +EA+ LF +M AGVRPN ITFVS+LSACS+AGLV+E H+ +
Sbjct: 460 VTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDM 519
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M E+ IEP V+HYGCM+D+ R G++++A+ I+ + + +W SL+ CR H N++
Sbjct: 520 MKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNME 579
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
L AA KL EL+P ++LL N+Y + RW+DV R R LMK + S + ++
Sbjct: 580 LAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIK 639
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEM--TLRIH 594
KV+ F D+ HPQ ++Y+ LE L K + +GY + + D + +EK +L+ H
Sbjct: 640 DKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHH 699
Query: 595 SEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDG 636
SE+LA N+ +C DCH+ I+L S + +REI+VRDSKR H FKDG
Sbjct: 700 SERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDG 759
Query: 637 LCSCGDY 643
CSCGD+
Sbjct: 760 RCSCGDF 766
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 236/515 (45%), Gaps = 53/515 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCA-----IKSCSALH 87
VDKN+ + + AD GG LR +++ A + C
Sbjct: 33 VDKNSSYGRSLQAADNGGGGGMEAPLRPLDVQEAMTMLTEGKAVQSAMYVPLLHRCVETG 92
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L + + H G D+FV+++L++ Y +C DAR+LFD +P+ RN+V+WT++
Sbjct: 93 SLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPE--RNVVTWTAL 150
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+TGY N L +F E L E G + + + L+AC +
Sbjct: 151 VTGYTLNSQPALGLEVFVEML----EMGR--------YPSHYTLGATLNACLASCDVDLG 198
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ HG+ IK G +S +GN+L YA+ G +D + + F + EK+ +TW ++I+ A++
Sbjct: 199 KQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAED 258
Query: 268 GLAAE-ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
E + +F M+ V N TL++V+ L LGK + K+ E ++
Sbjct: 259 EECVELGMSLFIDMLMD-GVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLP 317
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG---------MHCRAR--EA 375
V S + +Y + G+ D A + F QM++ ++ +W AMI+GY + R+R +A
Sbjct: 318 VKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQA 377
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG----VEHYG 431
L +F + ++ ++P+ TF S+LS CS +++G H I+ G V
Sbjct: 378 LTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQI-----HAQTIKSGFLSDVVVNS 432
Query: 432 CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE---- 487
+V++ + G +++A M + FV W S++ H A +LFE
Sbjct: 433 ALVNMYNKCGCIQDANKAFLEMPTRT-FVTWTSMISGYSQHGQPQ----EAIQLFEEMRL 487
Query: 488 --LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMK 520
+ PN + LLS + AG E+ E +MK
Sbjct: 488 AGVRPNEITFVSLLSAC-SYAGLVEEAEHYFDMMK 521
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/637 (35%), Positives = 350/637 (54%), Gaps = 42/637 (6%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDL--HS 91
++++ SWNS+++ R G E L+ FS M L IK C++ D+ H
Sbjct: 165 EEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHI 224
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
+ H G D+F++SA+IDMY+K G L++A LF +P N++ + +M+ G+
Sbjct: 225 AEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDP--NVIVFNAMIAGF 282
Query: 152 VQNDNA------REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+++ A REAL L+ E S + +S+L AC+ G
Sbjct: 283 CRDEAAVGKEVSREALSLYSEM------------QSRGMQPSEFTFSSILRACNLAGEFG 330
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ HG V+K F + +G+ LID Y+ G ++ + F + ++D VTW S+I+
Sbjct: 331 FGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCV 390
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
QN L +AL +F + + +K + T+S+V+ A A L V R G+ I IK
Sbjct: 391 QNELFEKALRLFQESI-CYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFT 449
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
+G S I M + G VD + F +M+ ++V SW+A+I+ + H AR+AL +F +M+ A
Sbjct: 450 AMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNA 509
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
V PN +TF++VL+ACSH GLV +G + M +E+ + P ++H C+VDLLGRAG+L +
Sbjct: 510 KVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLAD 569
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A I D VVW SLL +CRIH +++ G++ A ++ +LEP + +V+L N+Y +
Sbjct: 570 AEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLD 629
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
AG +TR LMK R + K PG S +ELR VH+F+ GDK HP+ IY+ L E+ K
Sbjct: 630 AGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSK 689
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++++ TD S D ++ + HSEK+A NLRVC DC
Sbjct: 690 IEKLAN-TDNASTGSDGISSSEQNLVGCHSEKIAVAFGMIHLPQSAPIRVMKNLRVCRDC 748
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H+ ++LIS +REI++RD RFH+F+ G CSCGDYW
Sbjct: 749 HSTMKLISGSENREIILRDGIRFHHFRGGSCSCGDYW 785
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 225/445 (50%), Gaps = 26/445 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-SLTPTRSTFPCAIKSCSALHDLHS 91
+ + N S+N +I+ +R G AL F+ R L R T+ A+ +CS DL +
Sbjct: 62 MPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRT 121
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
GK H + G VF+S++L MY+ CGE+ +AR++FD + + VSW S+L+GY
Sbjct: 122 GKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEE--HDDVSWNSLLSGY 179
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG--VTEG 209
V+ E L +F L+ G +S A+ S++ C+ + G + E
Sbjct: 180 VRAGAREETLKVFS--LMCHHGLG----------WNSFALGSIIKCCASGSDVGRHIAEA 227
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG V+K G D+++ + + +ID YA+ G + + +F + + + + +N++IA + ++
Sbjct: 228 VHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEA 287
Query: 270 AA------EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
A EAL ++ +M +S ++ + T S++L A G GK IH QV+K +
Sbjct: 288 AVGKEVSREALSLYSEM-QSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHD 346
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
+G+++ID+Y G ++ + F + ++++ +WT+MI+G + +AL LF + I
Sbjct: 347 DDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESI 406
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
G++P+ T SV++AC+ + + G + + ++ + + R+G +
Sbjct: 407 CYGLKPDLFTMSSVMNACASLAVARTG-EQIQCLAIKYGFNRFTAMGNSFIHMCARSGDV 465
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGA 468
+ M+ + D V W +++ +
Sbjct: 466 DAVTRRFQEMESR-DVVSWSAVISS 489
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 191/408 (46%), Gaps = 45/408 (11%)
Query: 80 IKSCSALHDLHSG----KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD--ARKLFDE 133
++SC+AL + + +AH A +F+ ++L+ Y + G + A +L DE
Sbjct: 9 LRSCTALPHVAAVHAHIARAHPTA-------SLFLRNSLLAAYCRLGVGAPLHAARLIDE 61
Query: 134 IPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
+P+R N VS+ +++ Y + AL F + + + VD A+
Sbjct: 62 MPRR--NAVSYNLLISSYSRAGLPGRALETFA-----------RARAAAGLRVDRFTYAA 108
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKD 253
L+ACSR + H + G + V + N+L YA G + +R+VFD E D
Sbjct: 109 ALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHD 168
Query: 254 AVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL--RLGKC 311
V+WNS+++ Y + G E L VF M + N+ L +++ A + + +
Sbjct: 169 DVSWNSLLSGYVRAGAREETLKVFSLMCHH-GLGWNSFALGSIIKCCASGSDVGRHIAEA 227
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
+H V+K L+ + + +++IDMY K G + A F + + NV + AMIAG+ CR
Sbjct: 228 VHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGF---CR 284
Query: 372 ---------AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL-NTMGHEF 421
+REAL L+ +M G++P+ TF S+L AC+ AG G + H F
Sbjct: 285 DEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSF 344
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
+ + + ++DL +G +++ Y + K D V W S++ C
Sbjct: 345 HDDDYIG--SALIDLYSDSGCMEDGYRCFRSLP-KQDIVTWTSMISGC 389
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 117/251 (46%), Gaps = 11/251 (4%)
Query: 227 NTLIDAYAR---GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS 283
N+L+ AY R G + +R + D M ++AV++N +I+ Y++ GL AL+ F + +
Sbjct: 38 NSLLAAYCRLGVGAPLHAAR-LIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAA 96
Query: 284 TDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDL 343
++ + T +A L A + LR GK +H + L V + S+ MY CG++
Sbjct: 97 AGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGE 156
Query: 344 ARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
AR+ F+ +E + SW ++++GY E L +F M G+ N S++ C+
Sbjct: 157 ARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCAS 216
Query: 404 AGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
V G H + H ++ G++ M+D+ + G L A L + +
Sbjct: 217 GSDV--GRHIAEAV-HGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVI 273
Query: 460 VVWGSLLGACR 470
V + G CR
Sbjct: 274 VFNAMIAGFCR 284
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 20 STNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCA 79
S + + T + ++ +V SW++VI+ A+ G + +ALR F+ M + P TF
Sbjct: 462 SGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNV 521
Query: 80 IKSCSALHDLHSGKQAHQ-QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRI 138
+ +CS + G + ++ +G + + ++D+ + G L+DA +
Sbjct: 522 LTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHD 581
Query: 139 RNIVSWTSMLT 149
+V W S+L
Sbjct: 582 DAVV-WRSLLA 591
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,604,696,377
Number of Sequences: 23463169
Number of extensions: 391421760
Number of successful extensions: 1184240
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7766
Number of HSP's successfully gapped in prelim test: 3648
Number of HSP's that attempted gapping in prelim test: 997034
Number of HSP's gapped (non-prelim): 56025
length of query: 644
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 495
effective length of database: 8,863,183,186
effective search space: 4387275677070
effective search space used: 4387275677070
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)