BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006457
(644 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/657 (65%), Positives = 529/657 (80%), Gaps = 29/657 (4%)
Query: 8 SVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL 67
SVS ++ + ++H+ NLTTLFN+YVDK +VFSWNSVIADLAR GDS EAL AFSSMRKL
Sbjct: 12 SVSRLL-HTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKL 70
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
SL PTRS+FPCAIK+CS+L D+ SGKQ HQQAF+FG+ D+FVSSALI MYS CG+L DA
Sbjct: 71 SLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDA 130
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
RK+FDEIP+R NIVSWTSM+ GY N NA +A+ LFK+ L++E++ + D +F+D
Sbjct: 131 RKVFDEIPKR--NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEND------DDDAMFLD 182
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH--VDVSRKV 245
S+ + SV+SACSRV G+TE H FVIKRGFD V VGNTL+DAYA+GG V V+RK+
Sbjct: 183 SMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKI 242
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD +++KD V++NSI+++YAQ+G++ EA +VF ++VK+ V NA+TLS VLLA++H G
Sbjct: 243 FDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGA 302
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
LR+GKCIHDQVI+M LE+ VIVGTSIIDMYCKCG+V+ ARKAF++MK KNVRSWTAMIAG
Sbjct: 303 LRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAG 362
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
YGMH A +AL+LF MI +GVRPNYITFVSVL+ACSHAGL EGW W N M F +EP
Sbjct: 363 YGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEP 422
Query: 426 GVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
G+EHYGCMVDLLGRAG L++AYDLI+ MK+K D ++W SLL ACRIHKNV+L EI+ +L
Sbjct: 423 GLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARL 482
Query: 486 FELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
FEL+ +NCGY++LLS+IYA+AGRW+DVER R +MKNR L K PGFSL+EL G+VH FL+G
Sbjct: 483 FELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIG 542
Query: 546 DKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------ 599
D+EHPQ EKIYE+L ELN KL E GYV++ +SV HDVD+EEKEMTLR+HSEKLA
Sbjct: 543 DEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIM 602
Query: 600 ------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH VI+LISK+VDRE VVRD+KRFH+FKDG CSCGDYW
Sbjct: 603 NTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust.
Identities = 253/630 (40%), Positives = 391/630 (62%), Gaps = 32/630 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + +F WN++I +R +AL +S+M+ ++P TFP +K+CS L L G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+ H Q F GF DVFV + LI +Y+KC L AR +F+ +P R IVSWT++++ Y
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN EAL +F + +V D VA+ SVL+A + + H
Sbjct: 199 QNGEPMEALEIFSQM------------RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V+K G + E + +L YA+ G V ++ +FD M + + WN++I+ YA+NG A E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A+D+F +M+ + DV+ + +++++ + A A +G L + +++ V + D + V + +++I
Sbjct: 307 AIDMFHEMI-NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DM+ KCG V+ AR F++ +++V W+AMI GYG+H RAREA+ L+ M + GV PN +
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF+ +L AC+H+G+V+EGW + N M + I P +HY C++DLLGRAG L +AY++I+
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M V+ VWG+LL AC+ H++V+LGE AA++LF ++P+N G++V LSN+YA A W+ V
Sbjct: 485 MPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRV 544
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R MK + L K G S VE+RG++ AF VGDK HP++E+I +E + +L+E G+V
Sbjct: 545 AEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 604
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLI 614
+ + +HD++ EE E TL HSE++A NLR C +CH +LI
Sbjct: 605 ANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLI 664
Query: 615 SKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
SK+VDREIVVRD+ RFH+FKDG+CSCGDYW
Sbjct: 665 SKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 205/382 (53%), Gaps = 19/382 (4%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H + + G F+ + LI S G+++ AR++FD++P+ I W +++ GY
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPR--PQIFPWNAIIRGYS 95
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+N++ ++ALL++ L V DS +L ACS ++ + H
Sbjct: 96 RNNHFQDALLMYSNMQLAR------------VSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG--MIEKDAVTWNSIIAIYAQNGLA 270
V + GFD++V V N LI YA+ + +R VF+G + E+ V+W +I++ YAQNG
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
EAL++F QM K DVK + V L +VL A L L+ G+ IH V+KM LE + S
Sbjct: 204 MEALEIFSQMRK-MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
+ MY KCGQV A+ F++MK N+ W AMI+GY + AREA+D+F++MI VRP+
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
I+ S +SAC+ G +++ +G + V ++D+ + G + E L+
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSV-EGARLV 380
Query: 451 EGMKVKADFVVWGSLLGACRIH 472
+ D VVW +++ +H
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLH 402
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 24/240 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K + N+ WN++I+ A+ G + EA+ F M + P + AI +C+ +
Sbjct: 279 LFDK-MKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L + ++ + DVF+SSALIDM++KCG + AR +FD R++V W++M
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD--RDVVVWSAM 395
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY + AREA+ L++ E GG N V +L AC+ + V
Sbjct: 396 IVGYGLHGRAREAISLYRAM-----ERGGVHPN-------DVTFLGLLMACNHSGM--VR 441
Query: 208 EGAHGFVIKRGFDSEVGVGNT----LIDAYARGGHVDVSRKVFDGMIEKDAVT-WNSIIA 262
EG F R D ++ +ID R GH+D + +V M + VT W ++++
Sbjct: 442 EGWWFF--NRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 502 bits (1293), Expect = e-141, Method: Compositional matrix adjust.
Identities = 268/635 (42%), Positives = 387/635 (60%), Gaps = 35/635 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ +++ V SWN+++A ++ G + AL SM + +L P+ T + + SAL
Sbjct: 192 VFDRMPERDLV-SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+ GK+ H A GF V +S+AL+DMY+KCG L AR+LFD + +R N+VSW SM
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER--NVVSWNSM 308
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ YVQN+N +EA+L+F++ L + V V++ L AC+ +
Sbjct: 309 IDAYVQNENPKEAMLIFQKML------------DEGVKPTDVSVMGALHACADLGDLERG 356
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H ++ G D V V N+LI Y + VD + +F + + V+WN++I +AQN
Sbjct: 357 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN 416
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G +AL+ F QM +S VK + T +V+ AIA L + K IH V++ L+++V V
Sbjct: 417 GRPIDALNYFSQM-RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFV 475
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
T+++DMY KCG + +AR F+ M E++V +W AMI GYG H + AL+LF +M K +
Sbjct: 476 TTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTI 535
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+PN +TF+SV+SACSH+GLV+ G M ++IE ++HYG MVDLLGRAG+L EA+
Sbjct: 536 KPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW 595
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
D I M VK V+G++LGAC+IHKNV+ E AA++LFEL P++ GYHVLL+NIY A
Sbjct: 596 DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAAS 655
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ 567
WE V + R M + L KTPG S+VE++ +VH+F G HP +KIY +LE+L ++
Sbjct: 656 MWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHT 609
E GYV D T+++ V+ + KE L HSEKLA NLRVC DCH
Sbjct: 716 EAGYVPD-TNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHN 774
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ IS V REIVVRD +RFH+FK+G CSCGDYW
Sbjct: 775 ATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 238 bits (606), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/502 (30%), Positives = 260/502 (51%), Gaps = 39/502 (7%)
Query: 17 DKHSTNTNLTTLFNKY------------VDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
+H T L +LF +Y +D +++++ A+ D +AL+ F M
Sbjct: 67 QEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM 126
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
R + P F +K C +L GK+ H GF D+F + L +MY+KC ++
Sbjct: 127 RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQV 186
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
++ARK+FD +P+ R++VSW +++ GY QN AR AL + K S C +N+
Sbjct: 187 NEARKVFDRMPE--RDLVSWNTIVAGYSQNGMARMALEMVK------SMC------EENL 232
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
+ I SVL A S + + V + HG+ ++ GFDS V + L+D YA+ G ++ +R+
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 292
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
+FDGM+E++ V+WNS+I Y QN EA+ +F +M+ VK V++ L A A LG
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE-GVKPTDVSVMGALHACADLG 351
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
L G+ IH +++ L+ +V V S+I MYCKC +VD A F +++ + + SW AMI
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
G+ + R +AL+ F +M V+P+ T+VSV++A + + W++ + ++
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRSCLD 470
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
V +VD+ + G + A LI M + W +++ H G+ AA +
Sbjct: 471 KNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTH---GFGK-AALE 525
Query: 485 LFE------LEPNNCGYHVLLS 500
LFE ++PN + ++S
Sbjct: 526 LFEEMQKGTIKPNGVTFLSVIS 547
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 237/472 (50%), Gaps = 29/472 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++ CS+L +L +Q F G +++ F + L+ ++ + G + +A ++F+ I ++
Sbjct: 44 LERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
V + +ML G+ + + +AL F D+V +L C
Sbjct: 101 --VLYHTMLKGFAKVSDLDKALQFFVRM------------RYDDVEPVVYNFTYLLKVCG 146
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
V + HG ++K GF ++ L + YA+ V+ +RKVFD M E+D V+WN+
Sbjct: 147 DEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNT 206
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
I+A Y+QNG+A AL++ M + ++K + +T+ +VL A++ L ++ +GK IH ++
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEE-NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS 265
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
+ V + T+++DMY KCG ++ AR+ F+ M E+NV SW +MI Y + +EA+ +F
Sbjct: 266 GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
KM+ GV+P ++ + L AC+ G ++ G +++ + E ++ V ++ + +
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCK 384
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSL-LGACRIHKNVD-LGEIAAKKLFELEPNNCGYHV 497
++ A + ++ + V W ++ LG + + +D L + + ++P+ Y
Sbjct: 385 CKEVDTAASMFGKLQSRT-LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVS 443
Query: 498 LLSNI----YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
+++ I + +W RS + T +LV++ K A ++
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT---ALVDMYAKCGAIMIA 492
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 22/253 (8%)
Query: 7 SSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRK 66
S V+S++S K ++F K + + SWN++I A+ G ++AL FS MR
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGK-LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 67 LSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSD 126
++ P T+ I + + L H K H ++VFV++AL+DMY+KCG +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 491
Query: 127 ARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFV 186
AR +FD + + R++ +W +M+ GY + + AL LF EE + G N
Sbjct: 492 ARLIFDMMSE--RHVTTWNAMIDGYGTHGFGKAALELF-----EEMQKGTIKPN------ 538
Query: 187 DSVAIASVLSACSRVTVNGVTEGAHG--FVIKRGFDSEVGVGN--TLIDAYARGGHVDVS 242
V SV+SACS +G+ E +++K + E+ + + ++D R G ++ +
Sbjct: 539 -GVTFLSVISACSH---SGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594
Query: 243 RKVFDGMIEKDAV 255
M K AV
Sbjct: 595 WDFIMQMPVKPAV 607
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 500 bits (1288), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/639 (40%), Positives = 379/639 (59%), Gaps = 44/639 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAI-KSCSAL 86
+F++ +K+ + WN++I+ + VE+++ F + S T +T I + + L
Sbjct: 176 VFDRMPEKDTIL-WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+L G Q H A G + +V + I +YSKCG++ LF E R +IV++ +
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF--RKPDIVAYNA 292
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG- 205
M+ GY N +L LFKE +L GA S + S V V+G
Sbjct: 293 MIHGYTSNGETELSLSLFKELML-----SGARLRSSTL-------------VSLVPVSGH 334
Query: 206 --VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ HG+ +K F S V L Y++ ++ +RK+FD EK +WN++I+
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y QNGL +A+ +F +M KS + N VT++ +L A A LG L LGK +HD V D E
Sbjct: 395 YTQNGLTEDAISLFREMQKS-EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
S+ V T++I MY KCG + AR+ F+ M +KN +W MI+GYG+H + +EAL++FY+M+
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML 513
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
+G+ P +TF+ VL ACSHAGLV+EG N+M H + EP V+HY CMVD+LGRAG L
Sbjct: 514 NSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHL 573
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
+ A IE M ++ VW +LLGACRIHK+ +L ++KLFEL+P+N GYHVLLSNI+
Sbjct: 574 QRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIH 633
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
+ + R K R+LAK PG++L+E+ H F GD+ HPQ ++IYE LE+L
Sbjct: 634 SADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLE 693
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
K++E GY + +HDV++EE+E+ +++HSE+LA NLRVC
Sbjct: 694 GKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCL 753
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCHTV +LISK+ +R IVVRD+ RFH+FKDG+CSCGDYW
Sbjct: 754 DCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 215/441 (48%), Gaps = 20/441 (4%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHS 91
V + +VF +N ++ + +L F+ +RK + L P ST+ AI + S D +
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA 137
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ H QA + G ++ + S ++ MY K + DARK+FD +P+ ++ + W +M++GY
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE--KDTILWNTMISGY 195
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+N+ E++ +F++ + N +D+ + +L A + + + H
Sbjct: 196 RKNEMYVESIQVFRDLI-----------NESCTRLDTTTLLDILPAVAELQELRLGMQIH 244
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
K G S V I Y++ G + + +F + D V +N++I Y NG
Sbjct: 245 SLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETE 304
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
+L +F +++ S + + TL +++ HL ++ IH +K + V T++
Sbjct: 305 LSLSLFKELMLS-GARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTAL 360
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+Y K +++ ARK F++ EK++ SW AMI+GY + +A+ LF +M K+ PN
Sbjct: 361 TTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNP 420
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+T +LSAC+ G + G W++ + + E + ++ + + G + EA L +
Sbjct: 421 VTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479
Query: 452 GMKVKADFVVWGSLLGACRIH 472
M K + V W +++ +H
Sbjct: 480 LM-TKKNEVTWNTMISGYGLH 499
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 152/314 (48%), Gaps = 13/314 (4%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
Q H Q + GF D+ + + L S G + AR +F + QR ++ + ++ G+
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV-QR-PDVFLFNVLMRGFSV 95
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
N++ +L +F S ++ +S A +SA S + HG
Sbjct: 96 NESPHSSLSVFAHL-----------RKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQ 144
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
+ G DSE+ +G+ ++ Y + V+ +RKVFD M EKD + WN++I+ Y +N + E+
Sbjct: 145 AVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVES 204
Query: 274 LDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
+ VF ++ + + + TL +L A+A L LRLG IH K V T I
Sbjct: 205 IQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFIS 264
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
+Y KCG++ + F + ++ ++ ++ AMI GY + +L LF +++ +G R T
Sbjct: 265 LYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST 324
Query: 394 FVSVLSACSHAGLV 407
VS++ H L+
Sbjct: 325 LVSLVPVSGHLMLI 338
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/640 (40%), Positives = 377/640 (58%), Gaps = 47/640 (7%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ +WN+V++ L + +EAL M + P T + +CS L L +GK+ H
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 97 QQAFIFG-FHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
A G + FV SAL+DMY C ++ R++FD + R I W +M+ GY QN+
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR--KIGLWNAMIAGYSQNE 383
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
+ +EALLLF E S + +S +A V+ AC R E HGFV+
Sbjct: 384 HDKEALLLFI-----------GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
KRG D + V NTL+D Y+R G +D++ ++F M ++D VTWN++I Y + +AL
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 276 VFDQM----------VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+ +M +K N++TL +L + A L L GK IH IK +L V
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VG++++DMY KCG + ++RK F+Q+ +KNV +W +I YGMH +EA+DL M+
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
GV+PN +TF+SV +ACSH+G+V EG M ++ +EP +HY C+VDLLGRAG++KE
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 672
Query: 446 AYDLIEGMKVKADFV---VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
AY L+ M DF W SLLGA RIH N+++GEIAA+ L +LEPN ++VLL+NI
Sbjct: 673 AYQLMNMM--PRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI 730
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
Y++AG W+ R MK + + K PG S +E +VH F+ GD HPQ EK+ YLE L
Sbjct: 731 YSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVC 604
++++ GYV D + V+H+V+++EKE+ L HSEKLA NLRVC
Sbjct: 791 WERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVC 850
Query: 605 GDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCH + ISK+VDREI++RD +RFH FK+G CSCGDYW
Sbjct: 851 NDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 227/462 (49%), Gaps = 33/462 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL- 86
+F++ ++N V SWNS+I+ L AL AF M ++ P+ T + +CS L
Sbjct: 155 VFDRISERNQV-SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 87 --HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
L GKQ H G + F+ + L+ MY K G+L+ ++ L R++V+W
Sbjct: 214 MPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG--RDLVTW 270
Query: 145 TSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN 204
++L+ QN+ EAL +E +LE E D I+SVL ACS + +
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVE------------PDEFTISSVLPACSHLEML 318
Query: 205 GVTEGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ H + +K G D VG+ L+D Y V R+VFDGM ++ WN++IA
Sbjct: 319 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
Y+QN EAL +F M +S + N+ T++ V+ A G + IH V+K L+
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR 438
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM- 382
V +++DMY + G++D+A + F +M+++++ +W MI GY +AL L +KM
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ 498
Query: 383 ----------IKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGC 432
+ ++PN IT +++L +C+ + +G ++ + N+ V
Sbjct: 499 NLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSA 557
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
+VD+ + G L+ + + + + K + + W ++ A +H N
Sbjct: 558 LVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN 598
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 219/436 (50%), Gaps = 32/436 (7%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
W ++ R EA+ + M L + P FP +K+ + L D+ GKQ H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 101 IFGFHRD-VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
FG+ D V V++ L+++Y KCG+ K+FD I + RN VSW S+++ +
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE--RNQVSWNSLISSLCSFEKWEM 182
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV-NGVTEG--AHGFVIK 216
AL F+ L +NV S + SV++ACS + + G+ G H + ++
Sbjct: 183 ALEAFRCML------------DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR 230
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
+G + + NTL+ Y + G + S+ + +D VTWN++++ QN EAL+
Sbjct: 231 KG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEY 289
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSIIDMY 335
+MV V+ + T+S+VL A +HL +LR GK +H +K L+E+ VG++++DMY
Sbjct: 290 LREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK-AGVRPNYITF 394
C C QV R+ F+ M ++ + W AMIAGY + +EAL LF M + AG+ N T
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408
Query: 395 VSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLI 450
V+ AC +G H F ++ G++ ++D+ R GK+ A +
Sbjct: 409 AGVVPACVRSGAFSR-----KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 451 EGMKVKADFVVWGSLL 466
M+ + D V W +++
Sbjct: 464 GKMEDR-DLVTWNTMI 478
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 10/241 (4%)
Query: 257 WNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV 316
W ++ ++ L EA+ + M+ +K + A+L A+A L + LGK IH V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMI-VLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 317 IKMDLE-ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREA 375
K +SV V +++++Y KCG K F+++ E+N SW ++I+ + A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 376 LDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH---YGC 432
L+ F M+ V P+ T VSV++ACS+ + EG + H + + G +
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLM-MGKQVHAYGLRKGELNSFIINT 241
Query: 433 MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA-CRIHKNVDLGEIAAKKLFE-LEP 490
+V + G+ GKL + L+ + D V W ++L + C+ + ++ E + + E +EP
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 491 N 491
+
Sbjct: 301 D 301
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV +WN +I G+ EA+ M + P TF +CS HSG
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS-----HSG 632
Query: 93 KQAHQQAFIFGFHRDVFVSSA------LIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ D V + ++D+ + G + +A +L + +P+ +W+S
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 147 ML 148
+L
Sbjct: 693 LL 694
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/656 (38%), Positives = 397/656 (60%), Gaps = 42/656 (6%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSL 69
+S++ ++ N LF++ + ++ SWN++I+ + G++ EAL + +R +
Sbjct: 189 ASLIHLYSRYKAVGNARILFDE-MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDS 247
Query: 70 TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARK 129
S + +C+ D + G H + G ++FVS+ LID+Y++ G L D +K
Sbjct: 248 VTVVSL----LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE--ESECGGASENSDNVFVD 187
+FD + +R+++SW S++ Y N+ A+ LF+E L + +C +
Sbjct: 304 VFDRM--YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC-----------LT 350
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVF 246
+++AS+LS + GF +++G F ++ +GN ++ YA+ G VD +R VF
Sbjct: 351 LISLASILSQLGDIRA---CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
+ + D ++WN+II+ YAQNG A+EA+++++ M + ++ N T +VL A + G L
Sbjct: 408 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
R G +H +++K L V V TS+ DMY KCG+++ A F Q+ N W +IA +
Sbjct: 468 RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACH 527
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
G H +A+ LF +M+ GV+P++ITFV++LSACSH+GLV EG M ++ I P
Sbjct: 528 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPS 587
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLF 486
++HYGCMVD+ GRAG+L+ A I+ M ++ D +WG+LL ACR+H NVDLG+IA++ LF
Sbjct: 588 LKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLF 647
Query: 487 ELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD 546
E+EP + GYHVLLSN+YA+AG+WE V+ RS+ + L KTPG+S +E+ KV F G+
Sbjct: 648 EVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGN 707
Query: 547 KEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
+ HP +E++Y L L KL+ +GYV D V+ DV+ +EKE L HSE+LA
Sbjct: 708 QTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIA 767
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH+V + ISK+ +REI+VRDS RFH+FK+G+CSCGDYW
Sbjct: 768 TPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 156/499 (31%), Positives = 266/499 (53%), Gaps = 33/499 (6%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS-SMRKL 67
+S+ + N+ + N L ++ +V++WN +I+ R G+S E +R FS M
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
LTP TFP +K+C + D G + H A FGF DV+V+++LI +YS+ + +A
Sbjct: 148 GLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R LFDE+P +R++ SW +M++GY Q+ NA+EAL L +D
Sbjct: 205 RILFDEMP--VRDMGSWNAMISGYCQSGNAKEALTLSNGLRA----------------MD 246
Query: 188 SVAIASVLSACSRVT--VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
SV + S+LSAC+ GVT H + IK G +SE+ V N LID YA G + +KV
Sbjct: 247 SVTVVSLLSACTEAGDFNRGVT--IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV 304
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
FD M +D ++WNSII Y N A+ +F +M + + ++ + +TL ++ ++ LG
Sbjct: 305 FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGD 363
Query: 306 LRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
+R + + ++ E + +G +++ MY K G VD AR FN + +V SW +I+
Sbjct: 364 IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIIS 423
Query: 365 GYGMHCRAREALDLFYKMIKAG-VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNI 423
GY + A EA++++ M + G + N T+VSVL ACS AG +++G L+ + +
Sbjct: 424 GYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK-LHGRLLKNGL 482
Query: 424 EPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAK 483
V + D+ G+ G+L++A L + + + V W +L+ H + + + K
Sbjct: 483 YLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 484 KLFE--LEPNNCGYHVLLS 500
++ + ++P++ + LLS
Sbjct: 542 EMLDEGVKPDHITFVTLLS 560
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 165/318 (51%), Gaps = 21/318 (6%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
+L S K H + + ++V +S+ L+++Y G ++ AR FD I R ++ +W M
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR--DVYAWNLM 123
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY + N+ E + F F+L S + D SVL AC R ++G
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFML-----------SSGLTPDYRTFPSVLKAC-RTVIDG-- 169
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H +K GF +V V +LI Y+R V +R +FD M +D +WN++I+ Y Q+
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS 229
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G A EAL + + + ++ D +VT+ ++L A G G IH IK LE + V
Sbjct: 230 GNAKEALTLSNGL-RAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
+ID+Y + G++ +K F++M +++ SW ++I Y ++ + A+ LF +M + +
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 388 RPNYITFVSVLSACSHAG 405
+P+ +T +S+ S S G
Sbjct: 345 QPDCLTLISLASILSQLG 362
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 147/303 (48%), Gaps = 25/303 (8%)
Query: 223 VGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVK 282
V + L++ Y G+V ++R FD + +D WN +I+ Y + G ++E + F +
Sbjct: 86 VCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFML 145
Query: 283 STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVD 342
S+ + + T +VL A + G IH +K V V S+I +Y + V
Sbjct: 146 SSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG 202
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP-NYITFVSVLSAC 401
AR F++M +++ SW AMI+GY A+EAL L G+R + +T VS+LSAC
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSAC 257
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
+ AG G H ++I+ G+E ++DL G+L++ + + M V+
Sbjct: 258 TEAGDFNRG-----VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR- 311
Query: 458 DFVVWGSLLGACRIHKNV--DLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERT 515
D + W S++ A +++ + +L ++P +C + L++I + G D+
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP-DCLTLISLASILSQLG---DIRAC 367
Query: 516 RSL 518
RS+
Sbjct: 368 RSV 370
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 44/255 (17%)
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L+ KC+H +++ ++V + ++++YC G V LAR F+ ++ ++V +W MI+G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 366 YGMHCRAREALDLF-YKMIKAGVRPNYITFVSVLSACS--------HAGLVQEGWHW--- 413
YG + E + F M+ +G+ P+Y TF SVL AC H ++ G+ W
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVY 186
Query: 414 -LNTMGHEFNIEPGVEH---------------YGCMVDLLGRAGKLKEAYDLIEGMKVKA 457
++ H ++ V + + M+ ++G KEA L G++
Sbjct: 187 VAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA-M 245
Query: 458 DFVVWGSLLGACR----IHKNVDLGEIAAKKLFELEPNNCGYHVLLSN----IYANAGRW 509
D V SLL AC ++ V + + K E E + +SN +YA GR
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE-------LFVSNKLIDLYAEFGRL 298
Query: 510 EDVERTRSLMKNRRL 524
D ++ M R L
Sbjct: 299 RDCQKVFDRMYVRDL 313
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/664 (38%), Positives = 391/664 (58%), Gaps = 64/664 (9%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K + + N+ WN++ A D V AL+ + M L L P TFP +KSC+
Sbjct: 92 KTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFK 151
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR------------- 137
G+Q H G D++V ++LI MY + G L DA K+FD+ P R
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 211
Query: 138 ----------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
++++VSW +M++GY + N +EAL LFK+ +
Sbjct: 212 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM------------K 259
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
NV D + +V+SAC++ + H ++ GF S + + N LID Y++ G ++
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
+ +F+ + KD ++WN++I Y L EAL +F +M++S + N VT+ ++L A A
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP-NDVTMLSILPACA 378
Query: 302 HLGVLRLGKCIH---DQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
HLG + +G+ IH D+ +K + + + TS+IDMY KCG ++ A + FN + K++ S
Sbjct: 379 HLGAIDIGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS 437
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
W AMI G+ MH RA + DLF +M K G++P+ ITFV +LSACSH+G++ G H TM
Sbjct: 438 WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT 497
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
++ + P +EHYGCM+DLLG +G KEA ++I M+++ D V+W SLL AC++H NV+LG
Sbjct: 498 QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELG 557
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
E A+ L ++EP N G +VLLSNIYA+AGRW +V +TR+L+ ++ + K PG S +E+
Sbjct: 558 ESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSV 617
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
VH F++GDK HP++ +IY LEE+ V L++ G+V D + V+ ++++E KE LR HSEKL
Sbjct: 618 VHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKL 677
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVC +CH +LISK+ REI+ RD RFH+F+DG+CSC
Sbjct: 678 AIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSC 737
Query: 641 GDYW 644
DYW
Sbjct: 738 NDYW 741
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 115/254 (45%), Gaps = 19/254 (7%)
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F + S+D +++ L + + L+ + IH Q+IK+ L + + +I+ +C
Sbjct: 17 FHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIE-FC 75
Query: 337 KCGQ----VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+ A F ++E N+ W M G+ + AL L+ MI G+ PN
Sbjct: 76 ILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSY 135
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY--GCMVDLLGRAGKLKEAYDLI 450
TF VL +C+ + +EG GH + ++ Y ++ + + G+L++A+ +
Sbjct: 136 TFPFVLKSCAKSKAFKEGQ---QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP--NNCGYHVLLSNIYANAGR 508
+ + D V + +L+ ++ A+KLF+ P + ++ ++S YA G
Sbjct: 193 DKSPHR-DVVSYTALIKGYASRGYIE----NAQKLFDEIPVKDVVSWNAMISG-YAETGN 246
Query: 509 W-EDVERTRSLMKN 521
+ E +E + +MK
Sbjct: 247 YKEALELFKDMMKT 260
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 260/624 (41%), Positives = 365/624 (58%), Gaps = 39/624 (6%)
Query: 40 SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQA 99
WN + +LA E++ + SM + +P +FP +KSC++L SG+Q H
Sbjct: 20 PWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 100 FIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNARE 159
G + FV +ALI MY KCG ++DARK+F+E PQ + V + ++++GY N +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 160 ALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGF 219
A +F+ V VDSV + ++ C+ + HG +K G
Sbjct: 140 AAYMFRRM------------KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGL 187
Query: 220 DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
DSEV V N+ I Y + G V+ R++FD M K +TWN++I+ Y+QNGLA + L++++Q
Sbjct: 188 DSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQ 247
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M KS+ V + TL +VL + AHLG ++G + V +V V + I MY +CG
Sbjct: 248 M-KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCG 306
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
+ AR F+ M K++ SWTAMI YGMH L LF MIK G+RP+ FV VLS
Sbjct: 307 NLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLS 366
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
ACSH+GL +G M E+ +EPG EHY C+VDLLGRAG+L EA + IE M V+ D
Sbjct: 367 ACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDG 426
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLM 519
VWG+LLGAC+IHKNVD+ E+A K+ E EPNN GY+VL+SNIY+++ E + R R +M
Sbjct: 427 AVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMM 486
Query: 520 KNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVI 579
+ R K PG+S VE +G+VH FL GD+ H Q E+++ L+EL + E+ +M
Sbjct: 487 RERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELA--GNM---- 540
Query: 580 HDVDQ-EEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDR 620
D D+ EE T R HSE+LA NLRVC DCH ++ +SK+VDR
Sbjct: 541 -DCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDR 599
Query: 621 EIVVRDSKRFHYFKDGLCSCGDYW 644
+ VVRD+ RFHYFKDG+CSC DYW
Sbjct: 600 QFVVRDASRFHYFKDGVCSCKDYW 623
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 120/240 (50%), Gaps = 23/240 (9%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ K + +WN+VI+ ++ G + + L + M+ + P T + SC+ L
Sbjct: 213 LFDEMPVKG-LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G + + GF +VFVS+A I MY++CG L+ AR +FD +P ++++VSWT+M
Sbjct: 272 AKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP--VKSLVSWTAM 329
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ Y + L+LF + + GA VFV VLSACS +G+T
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGA------VFV------MVLSACSH---SGLT 374
Query: 208 E-GAHGF-VIKRGFDSEVGVG--NTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
+ G F +KR + E G + L+D R G +D + + + M +E D W +++
Sbjct: 375 DKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLG 434
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 255/663 (38%), Positives = 376/663 (56%), Gaps = 65/663 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHS 91
+ K N F+WN++I A G D V ++ AF M S P + TFP IK+ + + L
Sbjct: 90 IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G+ H A DVFV+++LI Y CG+L A K+F I ++ ++VSW SM+ G+
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK--DVVSWNSMINGF 207
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
VQ + +AL LFK+ S++V V + VLSAC+++
Sbjct: 208 VQKGSPDKALELFKKM------------ESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW-------------- 257
++ + + + + N ++D Y + G ++ ++++FD M EKD VTW
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315
Query: 258 -----------------NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
N++I+ Y QNG EAL VF ++ ++K N +TL + L A
Sbjct: 316 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSAC 375
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
A +G L LG+ IH + K + + V +++I MY KCG ++ +R+ FN +++++V W+
Sbjct: 376 AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWS 435
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
AMI G MH EA+D+FYKM +A V+PN +TF +V ACSH GLV E + M
Sbjct: 436 AMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI 480
+ I P +HY C+VD+LGR+G L++A IE M + VWG+LLGAC+IH N++L E+
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEM 555
Query: 481 AAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVH 540
A +L ELEP N G HVLLSNIYA G+WE+V R M+ L K PG S +E+ G +H
Sbjct: 556 ACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIH 615
Query: 541 AFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE-KEMTLRIHSEKLA 599
FL GD HP EK+Y L E+ KL+ GY +++ V+ +++EE KE +L +HSEKLA
Sbjct: 616 EFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLA 675
Query: 600 ------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCG 641
NLRVCGDCH+V +LIS++ DREI+VRD RFH+F++G CSC
Sbjct: 676 ICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCN 735
Query: 642 DYW 644
D+W
Sbjct: 736 DFW 738
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 215/446 (48%), Gaps = 53/446 (11%)
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM--Y 118
FS+ + + RS I+ C +L L KQ H G D + +S L M
Sbjct: 18 FSNPNQPTTNNERSRHISLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAAL 74
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
S L ARK+FDEIP+ N +W +++ Y + ++ F + ++ ES+C
Sbjct: 75 SSFASLEYARKVFDEIPK--PNSFAWNTLIRAYASGPDPVLSIWAFLD-MVSESQC---- 127
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGH 238
+ + ++ A + V+ + + HG +K S+V V N+LI Y G
Sbjct: 128 ------YPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD 181
Query: 239 VDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
+D + KVF + EKD V+WNS+I + Q G +AL++F +M +S DVK + VT+ VL
Sbjct: 182 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM-ESEDVKASHVTMVGVLS 240
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
A A + L G+ + + + + ++ + +++DMY KCG ++ A++ F+ M+EK+ +
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300
Query: 359 WTAMIAGYGM-------------------------------HCRAREALDLFYKM-IKAG 386
WT M+ GY + + + EAL +F+++ ++
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360
Query: 387 VRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
++ N IT VS LSAC+ G ++ G W+++ + I ++ + + G L+++
Sbjct: 361 MKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 447 YDLIEGMKVKADFVVWGSLLGACRIH 472
++ ++ K D VW +++G +H
Sbjct: 420 REVFNSVE-KRDVFVWSAMIGGLAMH 444
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 163/342 (47%), Gaps = 14/342 (4%)
Query: 211 HGFVIKRGFDSEVGVGNTL--IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
HG +I+ G S+ + L + A + ++ +RKVFD + + ++ WN++I YA
Sbjct: 50 HGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGP 109
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
++ F MV + N T ++ A A + L LG+ +H +K + V V
Sbjct: 110 DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVA 169
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
S+I Y CG +D A K F +KEK+V SW +MI G+ +AL+LF KM V+
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
+++T V VLSAC+ ++ G + + E + + M+D+ + G +++A
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYI-EENRVNVNLTLANAMLDMYTKCGSIEDAKR 288
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNN--CGYHVLLSNIYANA 506
L + M+ K D V W ++L I ++ + AA+++ P ++ L+S Y
Sbjct: 289 LFDAMEEK-DNVTWTTMLDGYAISEDYE----AAREVLNSMPQKDIVAWNALIS-AYEQN 342
Query: 507 GRWED---VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVG 545
G+ + V L KN +L + S + +V A +G
Sbjct: 343 GKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 384
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/693 (35%), Positives = 387/693 (55%), Gaps = 65/693 (9%)
Query: 4 SKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSS 63
S S + +S+V ++ + + L K + V +W SVI +AL +F
Sbjct: 36 SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVE 95
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC-- 121
MR P + FP +KSC+ + DL G+ H G D++ +AL++MY+K
Sbjct: 96 MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLG 155
Query: 122 -GELSDARKLFDEIPQRIRN-------------------------------IVSWTSMLT 149
G +FDE+PQR N +VS+ +++
Sbjct: 156 MGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIA 215
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
GY Q+ +AL + +E + ++ DS ++SVL S +
Sbjct: 216 GYAQSGMYEDALRMVREM------------GTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG+VI++G DS+V +G++L+D YA+ ++ S +VF + +D ++WNS++A Y QNG
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 323
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
EAL +F QMV + VK AV S+V+ A AHL L LGK +H V++ ++ + +
Sbjct: 324 YNEALRLFRQMV-TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+++DMY KCG + ARK F++M + SWTA+I G+ +H EA+ LF +M + GV+P
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
N + FV+VL+ACSH GLV E W + N+M + + +EHY + DLLGRAGKL+EAY+
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNF 502
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
I M V+ VW +LL +C +HKN++L E A+K+F ++ N G +VL+ N+YA+ GRW
Sbjct: 503 ISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRW 562
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEV 569
+++ + R M+ + L K P S +E++ K H F+ GD+ HP +KI E+L+ + ++++
Sbjct: 563 KEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKE 622
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GYV D + V+HDVD+E K L HSE+LA N+R+C DCH I
Sbjct: 623 GYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAI 682
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ ISK+ +REI+VRD+ RFH+F G CSCGDYW
Sbjct: 683 KFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 471 bits (1212), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/635 (39%), Positives = 365/635 (57%), Gaps = 71/635 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV N +I G E ++ F +M ++ P TFPC +K+CS + G
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
++ H A G +FV + L+ MY KCG LS+AR + DE+ +R ++VSW S++ GY
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR--DVVSWNSLVVGYA 217
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN +AL + +E S + D+ +AS+L A S T V
Sbjct: 218 QNQRFDDALEVCREM------------ESVKISHDAGTMASLLPAVSNTTTENVM----- 260
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ +F M +K V+WN +I +Y +N + E
Sbjct: 261 ----------------------------YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVE 292
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
A++++ +M ++ + +AV++++VL A L LGK IH + + L ++++ ++I
Sbjct: 293 AVELYSRM-EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DMY KCG ++ AR F MK ++V SWTAMI+ YG R +A+ LF K+ +G+ P+ I
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
FV+ L+ACSHAGL++EG M + I P +EH CMVDLLGRAGK+KEAY I+
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M ++ + VWG+LLGACR+H + D+G +AA KLF+L P GY+VLLSNIYA AGRWE+V
Sbjct: 472 MSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 531
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYV 572
R++MK++ L K PG S VE+ +H FLVGD+ HPQ ++IY L+ L K++E+GYV
Sbjct: 532 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYV 591
Query: 573 TDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------------NLRVCGDCHT 609
D S +HDV++E+KE L +HSEKLA NLR+CGDCH
Sbjct: 592 PDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHV 651
Query: 610 VIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+LIS++ REI++RD+ RFH F+ G+CSCGDYW
Sbjct: 652 AAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 186/416 (44%), Gaps = 54/416 (12%)
Query: 56 EALRAFSSMRKLSL---TPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS 112
++ + SS+ KL L +P + F + D+ + + H + + + +
Sbjct: 20 QSRKVSSSLPKLELDQKSPQETVFLLG-QVLDTYPDIRTLRTVHSRIILEDLRCNSSLGV 78
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
L+ Y+ +++ ARK+FDEIP+ RN++ M+ YV N E + +F
Sbjct: 79 KLMRAYASLKDVASARKVFDEIPE--RNVIIINVMIRSYVNNGFYGEGVKVFGTM----- 131
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
CG NV D VL ACS + HG K G S + VGN L+
Sbjct: 132 -CGC------NVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSM 184
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
Y + G + +R V D M +D V+WNS++ YAQN +AL+V +M +S + +A T
Sbjct: 185 YGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM-ESVKISHDAGT 243
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK 352
++++L A+++ E+V MY K F +M
Sbjct: 244 MASLLPAVSNTTT-----------------ENV--------MYVK--------DMFFKMG 270
Query: 353 EKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWH 412
+K++ SW MI Y + EA++L+ +M G P+ ++ SVL AC + G
Sbjct: 271 KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKK 330
Query: 413 WLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ + + P + ++D+ + G L++A D+ E MK + D V W +++ A
Sbjct: 331 IHGYIERK-KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISA 384
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 16/320 (5%)
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H +I +G L+ AYA V +RKVFD + E++ + N +I Y NG
Sbjct: 62 HSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFY 121
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
E + VF M +V+ + T VL A + G + +G+ IH K+ L ++ VG
Sbjct: 122 GEGVKVFGTMC-GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ MY KCG + AR ++M ++V SW +++ GY + R +AL++ +M + +
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
T S+L A S+ E ++ M + + V + M+ + + EA +L
Sbjct: 241 AGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS-WNVMIGVYMKNAMPVEAVELY 297
Query: 451 EGMKV---KADFVVWGSLLGACRIHKNVDLGE-----IAAKKLFELEPNNCGYHVLLSNI 502
M+ + D V S+L AC + LG+ I KKL PN + L+ ++
Sbjct: 298 SRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI---PNLLLENALI-DM 353
Query: 503 YANAGRWEDVERTRSLMKNR 522
YA G E MK+R
Sbjct: 354 YAKCGCLEKARDVFENMKSR 373
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 468 bits (1204), Expect = e-131, Method: Compositional matrix adjust.
Identities = 255/662 (38%), Positives = 391/662 (59%), Gaps = 38/662 (5%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
L K+ VS+ + N+ N + + +V +WNS+I+ A G +EAL F
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG 122
SMR + + S+F IK C+ L +L +Q H +GF D + +AL+ YSKC
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 123 ELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSD 182
+ DA +LF EI + N+VSWT+M++G++QND EA+ LF E + G N
Sbjct: 345 AMLDALRLFKEIGC-VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK-----GVRPNE- 397
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
F SV +L+A ++ + V H V+K ++ VG L+DAY + G V+ +
Sbjct: 398 --FTYSV----ILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVL-LAIA 301
KVF G+ +KD V W++++A YAQ G A+ +F ++ K +K N T S++L + A
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG-GIKPNEFTFSSILNVCAA 506
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+ GK H IK L+ S+ V ++++ MY K G ++ A + F + +EK++ SW +
Sbjct: 507 TNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNS 566
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
MI+GY H +A +ALD+F +M K V+ + +TF+ V +AC+HAGLV+EG + + M +
Sbjct: 567 MISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 626
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
I P EH CMVDL RAG+L++A +IE M A +W ++L ACR+HK +LG +A
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLA 686
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
A+K+ ++P + +VLLSN+YA +G W++ + R LM R + K PG+S +E++ K ++
Sbjct: 687 AEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYS 746
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
FL GD+ HP ++IY LE+L+ +L+++GY D + V+ D+D E KE L HSE+LA
Sbjct: 747 FLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIA 806
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYF-KDGLCSCGD 642
NLRVCGDCH VI+LI+K+ +REIVVRDS RFH+F DG+CSCGD
Sbjct: 807 FGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGD 866
Query: 643 YW 644
+W
Sbjct: 867 FW 868
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 241/490 (49%), Gaps = 45/490 (9%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N LF+K ++ S+ S++ +R G + EA R F ++ +L + S F +K
Sbjct: 45 NAHNLFDKSPGRDRE-SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVS 103
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ L D G+Q H Q FGF DV V ++L+D Y K D RK+FDE+ + RN+V+
Sbjct: 104 ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE--RNVVT 161
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
WT++++GY +N E L LF E ++ +S A+ L + V
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQ------------PNSFTFAAALGVLAEEGV 209
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
G H V+K G D + V N+LI+ Y + G+V +R +FD K VTWNS+I+
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
YA NGL EAL +F M + V+ + + ++V+ A+L LR + +H V+K
Sbjct: 270 YAANGLDLEALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDLFYKM 382
+ T+++ Y KC + A + F ++ NV SWTAMI+G+ + EA+DLF +M
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 383 IKAGVRPNYITFVSVLSACS-------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
+ GVRPN T+ +L+A HA +V+ + +T+G ++D
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGT------------ALLD 436
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL-----EP 490
+ GK++EA + G+ K D V W ++L + E A K EL +P
Sbjct: 437 AYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAG---YAQTGETEAAIKMFGELTKGGIKP 492
Query: 491 NNCGYHVLLS 500
N + +L+
Sbjct: 493 NEFTFSSILN 502
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 152/282 (53%), Gaps = 19/282 (6%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF--LLEESECGGASENS 181
L +A LFD+ P R R S+ S+L G+ ++ +EA LF L E +C
Sbjct: 43 LYNAHNLFDKSPGRDRE--SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDC------- 93
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
++F +SVL + + H IK GF +V VG +L+D Y +G +
Sbjct: 94 -SIF------SSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD 146
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
RKVFD M E++ VTW ++I+ YA+N + E L +F +M ++ + N+ T +A L +A
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRM-QNEGTQPNSFTFAAALGVLA 205
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
GV G +H V+K L++++ V S+I++Y KCG V AR F++ + K+V +W +
Sbjct: 206 EEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNS 265
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSH 403
MI+GY + EAL +FY M VR + +F SV+ C++
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 2 KLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAF 61
+L S VSS + + N K + ++ SWNS+I+ A+ G +++AL F
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVF 584
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVS------SALI 115
M+K + TF +C+ H+G + + RD ++ S ++
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACT-----HAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639
Query: 116 DMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
D+YS+ G+L A K+ + +P + + W ++L
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAGSTI-WRTILAA 673
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/612 (40%), Positives = 374/612 (61%), Gaps = 42/612 (6%)
Query: 53 DSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSS 112
D A++A S++ L +T+ IK C + +H G + + G +F+ +
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 113 ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEES 172
LI+MY K L+DA +LFD++PQR N++SWT+M++ Y + ++AL L L
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQR--NVISWTTMISAYSKCKIHQKALELLVLML---- 154
Query: 173 ECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE--GAHGFVIKRGFDSEVGVGNTLI 230
DNV + +SVL +C NG+++ H +IK G +S+V V + LI
Sbjct: 155 --------RDNVRPNVYTYSSVLRSC-----NGMSDVRMLHCGIIKEGLESDVFVRSALI 201
Query: 231 DAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNA 290
D +A+ G + + VFD M+ DA+ WNSII +AQN + AL++F +M ++ + A
Sbjct: 202 DVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA 261
Query: 291 VTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQ 350
TL++VL A L +L LG H ++K D + +I+ +++DMYCKCG ++ A + FNQ
Sbjct: 262 -TLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQ 318
Query: 351 MKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
MKE++V +W+ MI+G + ++EAL LF +M +G +PNYIT V VL ACSHAGL+++G
Sbjct: 319 MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Query: 411 WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACR 470
W++ +M + I+P EHYGCM+DLLG+AGKL +A L+ M+ + D V W +LLGACR
Sbjct: 379 WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACR 438
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGF 530
+ +N+ L E AAKK+ L+P + G + LLSNIYAN+ +W+ VE R+ M++R + K PG
Sbjct: 439 VQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGC 498
Query: 531 SLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMT 590
S +E+ ++HAF++GD HPQ ++ + L +L +L +GYV + V+ D++ E+ E +
Sbjct: 499 SWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDS 558
Query: 591 LRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHY 632
LR HSEKLA NLR+CGDCH +L SK+ R IV+RD R+H+
Sbjct: 559 LRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHH 618
Query: 633 FKDGLCSCGDYW 644
F+DG CSCGDYW
Sbjct: 619 FQDGKCSCGDYW 630
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 125/240 (52%), Gaps = 23/240 (9%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
++F++ V + + WNS+I A+ S AL F M++ ++T +++C+ L
Sbjct: 215 SVFDEMVTGDAIV-WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G QAH I + +D+ +++AL+DMY KCG L DA ++F+++ + R++++W++
Sbjct: 274 ALLELGMQAH--VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKE--RDVITWST 329
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
M++G QN ++EAL LF E + G N + I VL ACS + +
Sbjct: 330 MISGLAQNGYSQEALKLF-----ERMKSSGTKPN-------YITIVGVLFACSHAGL--L 375
Query: 207 TEGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
+G + F + G D +ID + G +D + K+ + M E DAVTW +++
Sbjct: 376 EDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLG 435
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 3/182 (1%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+FN+ + + +V +W+++I+ LA+ G S EAL+ F M+ P T + +CS
Sbjct: 315 VFNQ-MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAG 373
Query: 88 DLHSG-KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G ++G +ID+ K G+L DA KL +E+ + V+W +
Sbjct: 374 LLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE-PDAVTWRT 432
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+L N A K+ + + E G N++ +S SV +R+ G+
Sbjct: 433 LLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
Query: 207 TE 208
+
Sbjct: 493 KK 494
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/698 (35%), Positives = 387/698 (55%), Gaps = 99/698 (14%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ ++S++S+I L + +++ FS M L P P K C+ L G
Sbjct: 76 IPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG 135
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR--------------- 137
KQ H + + G D FV ++ MY +CG + DARK+FD + +
Sbjct: 136 KQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARK 195
Query: 138 ------IR------------NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASE 179
+R NIVSW +L+G+ ++ +EA+++F++
Sbjct: 196 GCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI------------ 243
Query: 180 NSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
+ D V ++SVL + + + HG+VIK+G + V + +ID Y + GHV
Sbjct: 244 HHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHV 303
Query: 240 DVSRKVFD--------------------GMIEK---------------DAVTWNSIIAIY 264
+F+ G+++K + V+W SIIA
Sbjct: 304 YGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGC 363
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEES 324
AQNG EAL++F +M + VK N VT+ ++L A ++ L G+ H +++ L ++
Sbjct: 364 AQNGKDIEALELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN 422
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK 384
V VG+++IDMY KCG+++L++ FN M KN+ W +++ G+ MH +A+E + +F +++
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
++P++I+F S+LSAC GL EGW + M E+ I+P +EHY CMV+LLGRAGKL+
Sbjct: 483 TRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ 542
Query: 445 EAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYA 504
EAYDLI+ M + D VWG+LL +CR+ NVDL EIAA+KLF LEP N G +VLLSNIYA
Sbjct: 543 EAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYA 602
Query: 505 NAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNV 564
G W +V+ R+ M++ L K PG S ++++ +V+ L GDK HPQ ++I E ++E++
Sbjct: 603 AKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISK 662
Query: 565 KLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGD 606
++++ G+ ++ +HDV+++E+E L HSEKLA NLR+CGD
Sbjct: 663 EMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGD 722
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH VI+ IS REI +RD+ RFH+FKDG+CSCGD+W
Sbjct: 723 CHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 189/452 (41%), Gaps = 93/452 (20%)
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
QAH + G D ++S+ LI YS +DA + IP I S++S++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPD--PTIYSFSSLIYALTK 93
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF 213
+++ +F S + DS + ++ C+ ++ V + H
Sbjct: 94 AKLFTQSIGVFSRMF------------SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCV 141
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEA 273
G D + V ++ Y R G + +RKVFD M +KD VT ++++ YA+ G E
Sbjct: 142 SCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEV 201
Query: 274 LDVFDQMVKSTDVKCN-----------------------------------AVTLSAVLL 298
+ + +M +S+ ++ N VT+S+VL
Sbjct: 202 VRILSEM-ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLP 260
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ------------------ 340
++ +L +G+ IH VIK L + V +++IDMY K G
Sbjct: 261 SVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGV 320
Query: 341 -------------VDLARKAFNQMKEK----NVRSWTAMIAGYGMHCRAREALDLFYKMI 383
VD A + F KE+ NV SWT++IAG + + EAL+LF +M
Sbjct: 321 CNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ 380
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEG--WHWLNTMGHEF-NIEPGVEHYGCMVDLLGRA 440
AGV+PN++T S+L AC + + G H H N+ G ++D+ +
Sbjct: 381 VAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVG----SALIDMYAKC 436
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIH 472
G++ + + M K + V W SL+ +H
Sbjct: 437 GRINLSQIVFNMMPTK-NLVCWNSLMNGFSMH 467
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 115/241 (47%), Gaps = 26/241 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF + + NV SW S+IA A+ G +EAL F M+ + P T P + +C +
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+ H A +V V SALIDMY+KCG ++ ++ +F+ +P +N+V W S+
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT--KNLVCWNSL 460
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + A+E + +F+ + + D ++ S+LSAC +V G+T
Sbjct: 461 MNGFSMHGKAKEVMSIFESLM------------RTRLKPDFISFTSLLSACGQV---GLT 505
Query: 208 EGAHGFVIKRGFDSEVGVGNTL------IDAYARGGHVDVSRKVFDGM-IEKDAVTWNSI 260
+ G+ + E G+ L ++ R G + + + M E D+ W ++
Sbjct: 506 D--EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGAL 563
Query: 261 I 261
+
Sbjct: 564 L 564
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 68/163 (41%), Gaps = 2/163 (1%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
NL+ + + N+ WNS++ + G + E + F S+ + L P +F + +C
Sbjct: 440 NLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC 499
Query: 84 SALHDLHSG-KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
+ G K + +G + S ++++ + G+L +A L E+P + V
Sbjct: 500 GQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCV 559
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
W ++L +N A + ++ E E G N++
Sbjct: 560 -WGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIY 601
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/606 (39%), Positives = 359/606 (59%), Gaps = 35/606 (5%)
Query: 58 LRAFSSMRKLSLTPT-RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALID 116
LR S+ + S P R + +K C+ L G+ H F D+ + + L++
Sbjct: 44 LRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLN 103
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
MY+KCG L +ARK+F+++PQR + V+WT++++GY Q+D +ALL F + L G
Sbjct: 104 MYAKCGSLEEARKVFEKMPQR--DFVTWTTLISGYSQHDRPCDALLFFNQMLR-----FG 156
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
S N ++SV+ A + HGF +K GFDS V VG+ L+D Y R
Sbjct: 157 YSPNE-------FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRY 209
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G +D ++ VFD + ++ V+WN++IA +A+ +AL++F M++ + + + +++
Sbjct: 210 GLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD-GFRPSHFSYASL 268
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
A + G L GK +H +IK + G +++DMY K G + ARK F+++ +++V
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNT 416
SW +++ Y H +EA+ F +M + G+RPN I+F+SVL+ACSH+GL+ EGWH+
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388
Query: 417 MGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVD 476
M + I P HY +VDLLGRAG L A IE M ++ +W +LL ACR+HKN +
Sbjct: 389 MKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Query: 477 LGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELR 536
LG AA+ +FEL+P++ G HV+L NIYA+ GRW D R R MK + K P S VE+
Sbjct: 448 LGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIE 507
Query: 537 GKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSE 596
+H F+ D+ HPQ E+I EE+ K++E+GYV D + VI VDQ+E+E+ L+ HSE
Sbjct: 508 NAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSE 567
Query: 597 KLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLC 638
K+A N+RVCGDCHT I+L SKVV REI+VRD+ RFH+FKDG C
Sbjct: 568 KIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNC 627
Query: 639 SCGDYW 644
SC DYW
Sbjct: 628 SCKDYW 633
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 169/343 (49%), Gaps = 17/343 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F K ++ V +W ++I+ ++ +AL F+ M + +P T IK+ +A
Sbjct: 117 VFEKMPQRDFV-TWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G Q H GF +V V SAL+D+Y++ G + DA+ +FD + RN VSW ++
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES--RNDVSWNAL 233
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + +AL LF+ L D + AS+ ACS
Sbjct: 234 IAGHARRSGTEKALELFQGML------------RDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
+ H ++IK G GNTL+D YA+ G + +RK+FD + ++D V+WNS++ YAQ+
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 341
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
G EA+ F++M + ++ N ++ +VL A +H G+L G ++ + K +
Sbjct: 342 GFGKEAVWWFEEM-RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWH 400
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+++D+ + G ++ A + +M E W A++ MH
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 248/658 (37%), Positives = 372/658 (56%), Gaps = 33/658 (5%)
Query: 5 KSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM 64
++S +S+V+ K+ + +F++ +++ V SWNS+I G + + L F M
Sbjct: 229 RNSVGNSLVAFYLKNQRVDSARKVFDEMTERD-VISWNSIINGYVSNGLAEKGLSVFVQM 287
Query: 65 RKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGEL 124
+ +T C+ + G+ H F R+ + L+DMYSKCG+L
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 125 SDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
A+ +F E+ R ++VS+TSM+ GY + A EA+ LF+E +EE + +
Sbjct: 348 DSAKAVFREMSDR--SVVSYTSMIAGYAREGLAGEAVKLFEE--MEE----------EGI 393
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
D + +VL+ C+R + + H ++ + ++ V N L+D YA+ G + +
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VF M KD ++WN+II Y++N A EAL +F+ +++ + T++ VL A A L
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 305 VLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
G+ IH +++ V S++DMY KCG + LA F+ + K++ SWT MIA
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIE 424
GYGMH +EA+ LF +M +AG+ + I+FVS+L ACSH+GLV EGW + N M HE IE
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 633
Query: 425 PGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKK 484
P VEHY C+VD+L R G L +AY IE M + D +WG+LL CRIH +V L E A+K
Sbjct: 634 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 693
Query: 485 LFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLV 544
+FELEP N GY+VL++NIYA A +WE V+R R + R L K PG S +E++G+V+ F+
Sbjct: 694 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVA 753
Query: 545 GDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----- 599
GD +P+ E I +L ++ ++ E GY + D ++ EKE L HSEKLA
Sbjct: 754 GDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGI 813
Query: 600 -------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH + + +SK+ REIV+RDS RFH FKDG CSC +W
Sbjct: 814 ISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 218/437 (49%), Gaps = 26/437 (5%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
WN ++ +LA+ GD ++ F M + TF C KS S+L +H G+Q H
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
GF V ++L+ Y K + ARK+FDE+ + R+++SW S++ GYV N A +
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE--RDVISWNSIINGYVSNGLAEKG 280
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
L +F + L+ E +D I SV + C+ + + H +K F
Sbjct: 281 LSVFVQMLVSGIE------------IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
E NTL+D Y++ G +D ++ VF M ++ V++ S+IA YA+ GLA EA+ +F++M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
+ + + T++AVL A +L GK +H+ + + DL + V +++DMY KCG
Sbjct: 389 -EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-VRPNYITFVSVLS 399
+ A F++M+ K++ SW +I GY +C A EAL LF +++ P+ T VL
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGV---EHYG-CMVDLLGRAGKLKEAYDLIEGMKV 455
AC+ +G H + + G H +VD+ + G L A+ L + +
Sbjct: 508 ACASLSAFDKGREI-----HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 562
Query: 456 KADFVVWGSLLGACRIH 472
K D V W ++ +H
Sbjct: 563 K-DLVSWTVMIAGYGMH 578
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 214/432 (49%), Gaps = 29/432 (6%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N+ + G+ A++ K + P T ++ C+ L GK+
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
GF D + S L MY+ CG+L +A ++FDE+ +I + W ++ ++ + ++
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV--KIEKALFWNILMNELAKSGDFSGSI 180
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
LFK+ + S V +DS + V + S + E HGF++K GF
Sbjct: 181 GLFKKMM------------SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGE 228
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
VGN+L+ Y + VD +RKVFD M E+D ++WNSII Y NGLA + L VF QM+
Sbjct: 229 RNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML 288
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
S ++ + T+ +V A ++ LG+ +H +K +++DMY KCG +
Sbjct: 289 VS-GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
D A+ F +M +++V S+T+MIAGY A EA+ LF +M + G+ P+ T +VL+ C
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407
Query: 402 SHAGLVQEG-----WHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
+ L+ EG W N +G + + ++D+ + G ++EA + M+VK
Sbjct: 408 ARYRLLDEGKRVHEWIKENDLGFDIFVSNA------LMDMYAKCGSMQEAELVFSEMRVK 461
Query: 457 ADFVVWGSLLGA 468
D + W +++G
Sbjct: 462 -DIISWNTIIGG 472
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/634 (38%), Positives = 362/634 (57%), Gaps = 35/634 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ NV SW S+I+ LA+ G AL F MR+ + P TFPCA K+ ++L
Sbjct: 66 RLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPV 125
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+GKQ H A G DVFV + DMY K DARKLFDEIP+R N+ +W + ++
Sbjct: 126 TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPER--NLETWNAFISN 183
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
V + REA+ F EF + +S+ + L+ACS +
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGH------------PNSITFCAFLNACSDWLHLNLGMQL 231
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
HG V++ GFD++V V N LID Y + + S +F M K+AV+W S++A Y QN
Sbjct: 232 HGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHED 291
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+A ++ + K V+ + +S+VL A A + L LG+ IH +K +E ++ VG++
Sbjct: 292 EKASVLYLRSRKDI-VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA 350
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK--AGVR 388
++DMY KCG ++ + +AF++M EKN+ + ++I GY + AL LF +M G
Sbjct: 351 LVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT 410
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
PNY+TFVS+LSACS AG V+ G ++M + IEPG EHY C+VD+LGRAG ++ AY+
Sbjct: 411 PNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYE 470
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
I+ M ++ VWG+L ACR+H LG +AA+ LF+L+P + G HVLLSN +A AGR
Sbjct: 471 FIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGR 530
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQE 568
W + R +K + K G+S + ++ +VHAF D+ H +++I L +L +++
Sbjct: 531 WAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEA 590
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
GY D+ ++D+++EEK + HSEKLA NLR+CGDCH+
Sbjct: 591 AGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSF 650
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ +S V REI+VRD+ RFH FKDG+CSC DYW
Sbjct: 651 FKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 183/392 (46%), Gaps = 32/392 (8%)
Query: 109 FVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFL 168
F+++ LI+MYSK AR + P R N+VSWTS+++G QN + AL+ F E
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPAR--NVVSWTSLISGLAQNGHFSTALVEFFEMR 100
Query: 169 LEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNT 228
E G N A+AS+ R+ V G + H +K G +V VG +
Sbjct: 101 RE-----GVVPNDFTFPCAFKAVASL-----RLPVTG--KQIHALAVKCGRILDVFVGCS 148
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
D Y + D +RK+FD + E++ TWN+ I+ +G EA++ F + + D
Sbjct: 149 AFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF-RRIDGHP 207
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
N++T A L A + L LG +H V++ + V V +ID Y KC Q+ + F
Sbjct: 208 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 267
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS-HAGLV 407
+M KN SW +++A Y + +A L+ + K V + SVLSAC+ AGL
Sbjct: 268 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE 327
Query: 408 QEGWHWLNTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWG 463
L H ++ VE +VD+ G+ G ++++ + M K + V
Sbjct: 328 ------LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRN 380
Query: 464 SLLGACRIHKNVDLGEIAAKKLF-ELEPNNCG 494
SL+G VD+ A LF E+ P CG
Sbjct: 381 SLIGGYAHQGQVDM----ALALFEEMAPRGCG 408
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 306 LRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIA 364
+RLG+ +H +++K +D + +I+MY K + AR +NV SWT++I+
Sbjct: 22 MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLIS 81
Query: 365 GYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEG 410
G + AL F++M + GV PN TF A + L G
Sbjct: 82 GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/676 (35%), Positives = 389/676 (57%), Gaps = 70/676 (10%)
Query: 3 LSKSSSVSSVVSNVDKHSTNTNLT------------TLFNKYVDKNNVFSWNSVIADLAR 50
L K+ + ++ D S NT L+ ++F++ +KN+V SWN++++ +
Sbjct: 142 LGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDV-SWNALLSAYVQ 200
Query: 51 GGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFV 110
EA F S +L ++ C + + +Q + RDV
Sbjct: 201 NSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVEARQFFDSMNV----RDVVS 252
Query: 111 SSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLE 170
+ +I Y++ G++ +AR+LFDE P ++++ +WT+M++GY+QN EA LF + + E
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDESP--VQDVFTWTAMVSGYIQNRMVEEARELFDK-MPE 309
Query: 171 ESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD----SEVGVG 226
+E V+ ++L+ G +G + K FD V
Sbjct: 310 RNE---------------VSWNAMLA--------GYVQGERMEMAKELFDVMPCRNVSTW 346
Query: 227 NTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDV 286
NT+I YA+ G + ++ +FD M ++D V+W ++IA Y+Q+G + EAL +F QM +
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG- 405
Query: 287 KCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARK 346
+ N + S+ L A + L LGK +H +++K E VG +++ MYCKCG ++ A
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 347 AFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGL 406
F +M K++ SW MIAGY H AL F M + G++P+ T V+VLSACSH GL
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525
Query: 407 VQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
V +G + TM ++ + P +HY CMVDLLGRAG L++A++L++ M + D +WG+LL
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Query: 467 GACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAK 526
GA R+H N +L E AA K+F +EP N G +VLLSN+YA++GRW DV + R M+++ + K
Sbjct: 586 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 645
Query: 527 TPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEE 586
PG+S +E++ K H F VGD+ HP+ ++I+ +LEEL++++++ GYV+ + V+HDV++EE
Sbjct: 646 VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEE 705
Query: 587 KEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSK 628
KE +R HSE+LA NLRVC DCH I+ ++++ R I++RD+
Sbjct: 706 KERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNN 765
Query: 629 RFHYFKDGLCSCGDYW 644
RFH+FKDG CSCGDYW
Sbjct: 766 RFHHFKDGSCSCGDYW 781
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 232/531 (43%), Gaps = 101/531 (19%)
Query: 18 KHSTNTNLTTLFNKYVDK---NNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT---- 70
K +T T + K + K +++ WN I+ R G EALR F M + S
Sbjct: 41 KRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNG 100
Query: 71 ---------------------PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVF 109
P R + + + + GK ++ F RDV
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKA--RELFEIMPERDVC 158
Query: 110 VSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFK---E 166
+ ++ Y++ G + DAR +FD +P+ +N VSW ++L+ YVQN EA +LFK
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPE--KNDVSWNALLSAYVQNSKMEEACMLFKSREN 216
Query: 167 FLLEESEC--GGASENSDNV----FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
+ L C GG + V F DS+ + V+S
Sbjct: 217 WALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVS------------------------ 252
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
NT+I YA+ G +D +R++FD +D TW ++++ Y QN + EA ++FD+M
Sbjct: 253 -----WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
+ N V+ +A+L + + K + D + +V ++I Y +CG+
Sbjct: 308 PER-----NEVSWNAMLAGYVQGERMEMAKELFDVMPC----RNVSTWNTMITGYAQCGK 358
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+ A+ F++M +++ SW AMIAGY + EAL LF +M + G R N +F S LS
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST 418
Query: 401 CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD-----LLGRAGKLKEAYDLIEGMKV 455
C+ ++ L H ++ G E GC V + + G ++EA DL + M
Sbjct: 419 CADVVALE-----LGKQLHGRLVKGGYET-GCFVGNALLLMYCKCGSIEEANDLFKEMAG 472
Query: 456 KADFVVWGSLLGACRIHKNVDLGEIAAKKLFE------LEPNNCGYHVLLS 500
K D V W +++ H GE+A + FE L+P++ +LS
Sbjct: 473 K-DIVSWNTMIAGYSRH---GFGEVAL-RFFESMKREGLKPDDATMVAVLS 518
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 153/338 (45%), Gaps = 31/338 (9%)
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
A+ + R T + + ++K G DS++ N I +Y R G + + +VF M
Sbjct: 34 AANFHSLKRATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPR 92
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
+V++N +I+ Y +NG A +FD+M + V N ++ ++ LGK
Sbjct: 93 WSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN-------VMIKGYVRNRNLGKA 145
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
++ ++ E V +++ Y + G VD AR F++M EKN SW A+++ Y + +
Sbjct: 146 --RELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSK 203
Query: 372 AREALDLFYKMIKAGVRPNY--ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
EA LF R N+ +++ +L + E + ++M N+ V
Sbjct: 204 MEEACMLFKS------RENWALVSWNCLLGGFVKKKKIVEARQFFDSM----NVRD-VVS 252
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
+ ++ ++GK+ EA L + V+ D W +++ ++ V+ A++LF+
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDESPVQ-DVFTWTAMVSGYIQNRMVE----EARELFDKM 307
Query: 490 P--NNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLA 525
P N ++ +L+ Y R E + +M R ++
Sbjct: 308 PERNEVSWNAMLAG-YVQGERMEMAKELFDVMPCRNVS 344
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/585 (38%), Positives = 355/585 (60%), Gaps = 35/585 (5%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
+ +C L G++ H + ++ + L+ Y KC L DARK+ DE+P++
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK-- 116
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N+VSWT+M++ Y Q ++ EAL +F E + S+ N F A+VL++C
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMM--------RSDGKPNEFT----FATVLTSCI 164
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
R + G+ + HG ++K +DS + VG++L+D YA+ G + +R++F+ + E+D V+ +
Sbjct: 165 RASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTA 224
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
IIA YAQ GL EAL++F ++ S + N VT +++L A++ L +L GK H V++
Sbjct: 225 IIAGYAQLGLDEEALEMFHRL-HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRR 283
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
+L ++ S+IDMY KCG + AR+ F+ M E+ SW AM+ GY H RE L+LF
Sbjct: 284 ELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF 343
Query: 380 YKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM-GHEFNIEPGVEHYGCMVDLL 437
M + V+P+ +T ++VLS CSH + G + + M E+ +PG EHYGC+VD+L
Sbjct: 344 RLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDML 403
Query: 438 GRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHV 497
GRAG++ EA++ I+ M K V GSLLGACR+H +VD+GE ++L E+EP N G +V
Sbjct: 404 GRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYV 463
Query: 498 LLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYE 557
+LSN+YA+AGRW DV R++M + + K PG S ++ +H F D+ HP+ E++
Sbjct: 464 ILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLA 523
Query: 558 YLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------ 599
++E+++K+++ GYV D++ V++DVD+E+KE L HSEKLA
Sbjct: 524 KMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFK 583
Query: 600 NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH ++ SKV +RE+ +RD RFH DG+CSCGDYW
Sbjct: 584 NLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 182/350 (52%), Gaps = 23/350 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW ++I+ ++ G S EAL F+ M + P TF + SC L G
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H + + +FV S+L+DMY+K G++ +AR++F+ +P+ R++VS T+++ GY
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE--RDVVSCTAIIAGYA 230
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
Q EAL +F +S+ + + V AS+L+A S + + + AH
Sbjct: 231 QLGLDEEALEMFHRL------------HSEGMSPNYVTYASLLTALSGLALLDHGKQAHC 278
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V++R + N+LID Y++ G++ +R++FD M E+ A++WN+++ Y+++GL E
Sbjct: 279 HVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGRE 338
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS-- 330
L++F M VK +AVTL AVL +H + G I D ++ E GT
Sbjct: 339 VLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAG--EYGTKPGTEHY 396
Query: 331 --IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
I+DM + G++D A + +M K + G CR ++D+
Sbjct: 397 GCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGA---CRVHLSVDI 443
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/626 (38%), Positives = 368/626 (58%), Gaps = 41/626 (6%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N +I L + G +A+R S +P++ T+ I C L + H+
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
G +D F+++ LI MYS G + ARK+FD+ R R I W ++ + E L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT--RKRTIYVWNALFRALTLAGHGEEVL 163
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSAC--SRVTVNGVTEGA--HGFVIKR 217
L+ + N V D VL AC S TVN + +G H + +R
Sbjct: 164 GLYWKM------------NRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR 211
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVF 277
G+ S V + TL+D YAR G VD + VF GM ++ V+W+++IA YA+NG A EAL F
Sbjct: 212 GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271
Query: 278 DQMVKST-DVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
+M++ T D N+VT+ +VL A A L L GK IH +++ L+ + V ++++ MY
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYG 331
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
+CG++++ ++ F++M +++V SW ++I+ YG+H ++A+ +F +M+ G P +TFVS
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VL ACSH GLV+EG TM + I+P +EHY CMVDLLGRA +L EA +++ M+ +
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
VWGSLLG+CRIH NV+L E A+++LF LEP N G +VLL++IYA A W++V+R +
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVK 511
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
L+++R L K PG +E+R K+++F+ D+ +P E+I+ +L +L ++E GY+
Sbjct: 512 KLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTK 571
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
V+++++ EEKE + HSEKLA NLR+C DCH + ISK +
Sbjct: 572 GVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFM 631
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
++EI+VRD RFH FK+G+CSCGDYW
Sbjct: 632 EKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 22/232 (9%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSL--TPTRSTFPCAIKSCSALHDLHSGKQ 94
NV SW+++IA A+ G + EALR F M + + +P T +++C++L L GK
Sbjct: 247 NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKL 306
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H G + V SAL+ MY +CG+L +++FD + R++VSW S+++ Y +
Sbjct: 307 IHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD--RDVVSWNSLISSYGVH 364
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
++A+ +F+E L GAS V SVL ACS + V EG F
Sbjct: 365 GYGKKAIQIFEEML-----ANGASPT-------PVTFVSVLGACSHEGL--VEEGKRLFE 410
Query: 215 I---KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
G ++ ++D R +D + K+ M E W S++
Sbjct: 411 TMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ D++ V SWNS+I+ G +A++ F M +PT TF + +CS
Sbjct: 342 VFDRMHDRD-VVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400
Query: 88 DLHSGKQAHQQAFI-FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
+ GK+ + + G + + ++D+ + L +A K+ ++ V W S
Sbjct: 401 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV-WGS 459
Query: 147 ML 148
+L
Sbjct: 460 LL 461
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/661 (38%), Positives = 367/661 (55%), Gaps = 55/661 (8%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHSGKQA 95
+V SWNS+I A+ G AL FS M + P T + C++L GKQ
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H A +++FV + L+DMY+KCG + +A +F + ++++VSW +M+ GY Q
Sbjct: 252 HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM--SVKDVVSWNAMVAGYSQIG 309
Query: 156 NAREALLLFKEFLLEE---------SECGGASEN--------------SDNVFVDSVAIA 192
+A+ LF++ E+ + G ++ S + + V +
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFD-------SEVGVGNTLIDAYARGGHVDVSRKV 245
SVLS C+ V + H + IK D E V N LID YA+ VD +R +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAM 429
Query: 246 FDGMI--EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKS-TDVKCNAVTLSAVLLAIAH 302
FD + E+D VTW +I Y+Q+G A +AL++ +M + + NA T+S L+A A
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 303 LGVLRLGKCIHDQVIKMDLEE-SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
L LR+GK IH ++ + V +IDMY KCG + AR F+ M KN +WT+
Sbjct: 490 LAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTS 549
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
++ GYGMH EAL +F +M + G + + +T + VL ACSH+G++ +G + N M F
Sbjct: 550 LMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVF 609
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
+ PG EHY C+VDLLGRAG+L A LIE M ++ VVW + L CRIH V+LGE A
Sbjct: 610 GVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYA 669
Query: 482 AKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHA 541
A+K+ EL N+ G + LLSN+YANAGRW+DV R RSLM+++ + K PG S VE
Sbjct: 670 AEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTT 729
Query: 542 FLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-- 599
F VGDK HP ++IY+ L + +++++GYV + +HDVD EEK+ L HSEKLA
Sbjct: 730 FFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALA 789
Query: 600 ----------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDY 643
NLRVCGDCHT +S+++D +I++RDS RFH+FK+G CSC Y
Sbjct: 790 YGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGY 849
Query: 644 W 644
W
Sbjct: 850 W 850
Score = 218 bits (556), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 231/486 (47%), Gaps = 71/486 (14%)
Query: 38 VFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQ 97
V+ WNS+I G + + L F M LS TP TFP K+C + + G+ AH
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 98 QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNA 157
+ + GF +VFV +AL+ MYS+C LSDARK+FDE+ + ++VSW S++ Y +
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM--SVWDVVSWNSIIESYAKLGKP 209
Query: 158 REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKR 217
+ AL +F N D++ + +VL C+ + + + + H F +
Sbjct: 210 KVALEMFSRM-----------TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 218 GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA--------------- 262
+ VGN L+D YA+ G +D + VF M KD V+WN+++A
Sbjct: 259 EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 263 --------------------IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAH 302
YAQ GL EAL V QM+ S+ +K N VTL +VL A
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML-SSGIKPNEVTLISVLSGCAS 377
Query: 303 LGVLRLGKCIHDQVIKMDLE-------ESVIVGTSIIDMYCKCGQVDLARKAFNQM--KE 353
+G L GK IH IK ++ + +V +IDMY KC +VD AR F+ + KE
Sbjct: 378 VGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE 437
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIK--AGVRPNYITFVSVLSACSHAGLVQEGW 411
++V +WT MI GY H A +AL+L +M + RPN T L AC+ ++ G
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG- 496
Query: 412 HWLNTMGHEF---NIEPGVEHY--GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
H + N + V + C++D+ + G + +A + + M K + V W SL+
Sbjct: 497 ----KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE-VTWTSLM 551
Query: 467 GACRIH 472
+H
Sbjct: 552 TGYGMH 557
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 203/467 (43%), Gaps = 62/467 (13%)
Query: 66 KLSLTPTRST--FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGE 123
K+SL T + P I C + + K HQ+ FG + ++S LI Y G
Sbjct: 19 KVSLFSTSAPEITPPFIHKCKTISQV---KLIHQKLLSFGI-LTLNLTSHLISTYISVGC 74
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
LS A L P + W S++ Y N A + L LF +S +
Sbjct: 75 LSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM------------HSLS 122
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
D+ V AC ++ E AH + GF S V VGN L+ Y+R + +R
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
KVFD M D V+WNSII YA+ G AL++F +M + + +TL VL A L
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G LGK +H + ++ +++ VG ++DMY KCG +D A F+ M K+V SW AM+
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 364 AGYGMHCRAREALDLFYK-----------------------------------MIKAGVR 388
AGY R +A+ LF K M+ +G++
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYG-------CMVDLLGRAG 441
PN +T +SVLS C+ G + G ++ ++ I+ +G ++D+ +
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKE-IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421
Query: 442 KLKEAYDLIEGMKVKA-DFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
K+ A + + + K D V W ++G H + + ++FE
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 171/352 (48%), Gaps = 35/352 (9%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K +V +W++ I+ A+ G EAL M + P T + C+++ L GK+
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 95 AHQQAFIF-------GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
H A + G + V + LIDMY+KC ++ AR +FD + + R++V+WT M
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ GY Q+ +A +AL L E E +C + N F S A L AC+ + +
Sbjct: 447 IGGYSQHGDANKALELLSEMF--EEDC----QTRPNAFTISCA----LVACASLAALRIG 496
Query: 208 EGAHGFVIKRGFDS-EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H + ++ ++ + V N LID YA+ G + +R VFD M+ K+ VTW S++ Y
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
+G EAL +FD+M + K + VTL VL A +H G++ DQ ++ +
Sbjct: 557 HGYGEEALGIFDEM-RRIGFKLDGVTLLVVLYACSHSGMI-------DQGMEYFNRMKTV 608
Query: 327 VGTS--------IIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
G S ++D+ + G+++ A + +M E W A ++ +H
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIH 660
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 260/725 (35%), Positives = 389/725 (53%), Gaps = 94/725 (12%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M L + S ++V+S K + F++ +++V SW ++I G +A+R
Sbjct: 75 MPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV-SWTTMIVGYKNIGQYHKAIRV 133
Query: 61 FSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSK 120
M K + PT+ T + S +A + +GK+ H G +V VS++L++MY+K
Sbjct: 134 MGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 121 CGELSDARKLFDEIPQRI-----------------------------RNIVSWTSMLTGY 151
CG+ A+ +FD + R R+IV+W SM++G+
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
Q AL +F + L + + D +ASVLSAC+ + + + H
Sbjct: 254 NQRGYDLRALDIFSKMLRDSL-----------LSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV-----------------FDGMI---- 250
++ GFD V N LI Y+R G V+ +R++ DG I
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 251 ------------EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
++D V W ++I Y Q+G EA+++F MV + N+ TL+A+L
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-RPNSYTLAAMLS 421
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVR 357
+ L L GK IH +K SV V ++I MY K G + A +AF+ ++ E++
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 358 SWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTM 417
SWT+MI H A EAL+LF M+ G+RP++IT+V V SAC+HAGLV +G + + M
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMM 541
Query: 418 GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDL 477
I P + HY CMVDL GRAG L+EA + IE M ++ D V WGSLL ACR+HKN+DL
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDL 601
Query: 478 GEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRG 537
G++AA++L LEP N G + L+N+Y+ G+WE+ + R MK+ R+ K GFS +E++
Sbjct: 602 GKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKH 661
Query: 538 KVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEK 597
KVH F V D HP+ +IY ++++ +++++GYV D SV+HD+++E KE LR HSEK
Sbjct: 662 KVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEK 721
Query: 598 LA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCS 639
LA NLRVC DCHT I+ ISK+V REI+VRD+ RFH+FKDG CS
Sbjct: 722 LAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCS 781
Query: 640 CGDYW 644
C DYW
Sbjct: 782 CRDYW 786
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 70/286 (24%)
Query: 188 SVAIASVLSACSRVTVNGVTEG--------AHGFVIKRGFDSEVGVGNTLIDAYARGGHV 239
++++++L C+ + V + H VIK G V + N L++ Y++ G+
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYA 65
Query: 240 DVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAV-------- 291
+RK+FD M + A +WN++++ Y++ G + FDQ+ + V +
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG 125
Query: 292 ----------------------TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
TL+ VL ++A + GK +H ++K+ L +V V
Sbjct: 126 QYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSN 185
Query: 330 SIIDMYCKC-------------------------------GQVDLARKAFNQMKEKNVRS 358
S+++MY KC GQ+DLA F QM E+++ +
Sbjct: 186 SLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVT 245
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAG-VRPNYITFVSVLSACSH 403
W +MI+G+ ALD+F KM++ + P+ T SVLSAC++
Sbjct: 246 WNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/647 (38%), Positives = 371/647 (57%), Gaps = 43/647 (6%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N +F+K + + NV +W +I + G EA+R F M + T +C
Sbjct: 221 NAYKVFDK-MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC---GELSDARKLFDEIPQRIRN 140
+ L +L GKQ H A G DV +L+DMY+KC G + D RK+FD + +
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDH--S 335
Query: 141 IVSWTSMLTGYVQNDN-AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
++SWT+++TGY++N N A EA+ LF E + + G E + F +S AC
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQ-----GHVEPNHFTF------SSAFKACG 384
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
++ V + G KRG S V N++I + + ++ +++ F+ + EK+ V++N+
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
+ +N +A + ++ + ++ +A T +++L +A++G +R G+ IH QV+K+
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITER-ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL 503
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
L + V ++I MY KCG +D A + FN M+ +NV SWT+MI G+ H A L+ F
Sbjct: 504 GLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETF 563
Query: 380 YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
+MI+ GV+PN +T+V++LSACSH GLV EGW N+M + I+P +EHY CMVDLL R
Sbjct: 564 NQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
AG L +A++ I M +AD +VW + LGACR+H N +LG++AA+K+ EL+PN ++ L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683
Query: 500 SNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYL 559
SNIYA AG+WE+ R MK R L K G S +E+ K+H F VGD HP +IY+ L
Sbjct: 684 SNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDEL 743
Query: 560 EELNVKLQEVGYVTDMTSVIHDVDQEEKEMT----LRIHSEKLA---------------- 599
+ L +++ GYV D V+H +++E E L HSEK+A
Sbjct: 744 DRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRV 803
Query: 600 --NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVCGDCH ++ IS V REIV+RD RFH+FKDG CSC DYW
Sbjct: 804 FKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 237/485 (48%), Gaps = 43/485 (8%)
Query: 51 GGDSVEALRAFSSMRKLSLTPTRS-TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVF 109
GD A+ A M + + P S TF +KSC D GK H + F D
Sbjct: 39 AGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV 98
Query: 110 VSSALIDMYSKCGELSDARKLFDEIPQRI--RNIVSWTSMLTGYVQNDNAREALLLFKEF 167
+ ++LI +YSK G+ + A +F E +R R++VSW++M+ Y N +A+ +F EF
Sbjct: 99 LYNSLISLYSKSGDSAKAEDVF-ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF 157
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRG-FDSEVGVG 226
L E G + + +V+ ACS GV GF++K G F+S+V VG
Sbjct: 158 L----ELG--------LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVG 205
Query: 227 NTLIDAYARG-GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD 285
+LID + +G + + KVFD M E + VTW +I Q G EA+ F MV S
Sbjct: 206 CSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS-G 264
Query: 286 VKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC---GQVD 342
+ + TLS+V A A L L LGK +H I+ L + V S++DMY KC G VD
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVD 322
Query: 343 LARKAFNQMKEKNVRSWTAMIAGYGMHCR-AREALDLFYKMIKAG-VRPNYITFVSVLSA 400
RK F++M++ +V SWTA+I GY +C A EA++LF +MI G V PN+ TF S A
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 401 CSHAGLVQEGWHWLNTMGHEFN--IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKAD 458
C + + G +G F + ++ + ++ ++++A E + K +
Sbjct: 383 CGNLSDPRVGKQ---VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-N 438
Query: 459 FVVWGSLL-GACRIHKNVDLGEIAAKKLFELEPNNCG-----YHVLLSNIYANAGRWEDV 512
V + + L G CR N++ E A K L E+ G + LLS + AN G
Sbjct: 439 LVSYNTFLDGTCR---NLNF-EQAFKLLSEITERELGVSAFTFASLLSGV-ANVGSIRKG 493
Query: 513 ERTRS 517
E+ S
Sbjct: 494 EQIHS 498
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 193/383 (50%), Gaps = 24/383 (6%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K +V SW++++A G ++A++ F +L L P + I++CS + G+
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 95 AHQQAFIFG-FHRDVFVSSALIDMYSKCGE--LSDARKLFDEIPQRIRNIVSWTSMLTGY 151
G F DV V +LIDM+ K GE +A K+FD++ + N+V+WT M+T
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSE--LNVVTWTLMITRC 244
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+Q REA+ F + +L E D ++SV SAC+ + + + H
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFES------------DKFTLSSVFSACAELENLSLGKQLH 292
Query: 212 GFVIKRGFDSEVGVGNTLIDAYAR---GGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN- 267
+ I+ G +V +L+D YA+ G VD RKVFD M + ++W ++I Y +N
Sbjct: 293 SWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNC 350
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
LA EA+++F +M+ V+ N T S+ A +L R+GK + Q K L + V
Sbjct: 351 NLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSV 410
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
S+I M+ K +++ A++AF + EKN+ S+ + G + +A L ++ + +
Sbjct: 411 ANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
Query: 388 RPNYITFVSVLSACSHAGLVQEG 410
+ TF S+LS ++ G +++G
Sbjct: 471 GVSAFTFASLLSGVANVGSIRKG 493
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/659 (36%), Positives = 363/659 (55%), Gaps = 70/659 (10%)
Query: 41 WNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAF 100
+N + DL+R + + + +R + + +F +K+ S + L G + H AF
Sbjct: 79 FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAF 138
Query: 101 IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREA 160
D FV + +DMY+ CG ++ AR +FDE+ R ++V+W +M+ Y + EA
Sbjct: 139 KIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR--DVVTWNTMIERYCRFGLVDEA 196
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK---- 216
LF+E NV D + + +++SAC R + F+I+
Sbjct: 197 FKLFEEM------------KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVR 244
Query: 217 ----------------------RGFDSEVGVGN-----TLIDAYARGGHVDVSRKVFDGM 249
R F ++ V N ++ Y++ G +D ++ +FD
Sbjct: 245 MDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQT 304
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG 309
+KD V W ++I+ Y ++ EAL VF++M S +K + V++ +V+ A A+LG+L
Sbjct: 305 EKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS-GIKPDVVSMFSVISACANLGILDKA 363
Query: 310 KCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMH 369
K +H + LE + + ++I+MY KCG +D R F +M +NV SW++MI MH
Sbjct: 364 KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMH 423
Query: 370 CRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH 429
A +AL LF +M + V PN +TFV VL CSH+GLV+EG +M E+NI P +EH
Sbjct: 424 GEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEH 483
Query: 430 YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE 489
YGCMVDL GRA L+EA ++IE M V ++ V+WGSL+ ACRIH ++LG+ AAK++ ELE
Sbjct: 484 YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELE 543
Query: 490 PNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEH 549
P++ G VL+SNIYA RWEDV R +M+ + + K G S ++ GK H FL+GDK H
Sbjct: 544 PDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRH 603
Query: 550 PQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------- 599
Q +IY L+E+ KL+ GYV D SV+ DV++EEK+ + HSEKLA
Sbjct: 604 KQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEK 663
Query: 600 --------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH +L+SKV +REI+VRD RFH +K+GLCSC DYW
Sbjct: 664 EEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 62/125 (49%), Gaps = 14/125 (11%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW+S+I L+ G++ +AL F+ M++ ++ P TF + CS + G
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464
Query: 93 KQAHQQAFIFGFHRDVFVSSA-------LIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
K+ IF D + + ++D++ + L +A ++ + +P N+V W
Sbjct: 465 KK------IFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPV-ASNVVIWG 517
Query: 146 SMLTG 150
S+++
Sbjct: 518 SLMSA 522
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/641 (38%), Positives = 377/641 (58%), Gaps = 40/641 (6%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F DK++V SWNS+I L + G +EA+ + SMR+ + P T ++ SC++L
Sbjct: 371 VFYFMTDKDSV-SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLK 429
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
G+Q H ++ G +V VS+AL+ +Y++ G L++ RK+F +P+ + VSW S+
Sbjct: 430 WAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH--DQVSWNSI 487
Query: 148 LTGYVQNDNA-REALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+ +++ + EA++ F L G ++ + +SVLSA S ++ +
Sbjct: 488 IGALARSERSLPEAVVCF----LNAQRAGQK--------LNRITFSSVLSAVSSLSFGEL 535
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK-DAVTWNSIIAIYA 265
+ HG +K E N LI Y + G +D K+F M E+ D VTWNS+I+ Y
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
N L A+ALD+ M++ T + ++ + VL A A + L G +H ++ LE V
Sbjct: 596 HNELLAKALDLVWFMLQ-TGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM-IK 384
+VG++++DMY KCG++D A + FN M +N SW +MI+GY H + EAL LF M +
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLD 714
Query: 385 AGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLK 444
P+++TFV VLSACSHAGL++EG+ +M + + P +EH+ CM D+LGRAG+L
Sbjct: 715 GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELD 774
Query: 445 EAYDLIEGMKVKADFVVWGSLLGAC-RIH-KNVDLGEIAAKKLFELEPNNCGYHVLLSNI 502
+ D IE M +K + ++W ++LGAC R + + +LG+ AA+ LF+LEP N +VLL N+
Sbjct: 775 KLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNM 834
Query: 503 YANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEEL 562
YA GRWED+ + R MK+ + K G+S V ++ VH F+ GDK HP + IY+ L+EL
Sbjct: 835 YAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKEL 894
Query: 563 NVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA-------------------NLRV 603
N K+++ GYV ++D++QE KE L HSEKLA NLRV
Sbjct: 895 NRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRV 954
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CGDCH+ + ISK+ R+I++RDS RFH+F+DG CSC D+W
Sbjct: 955 CGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 216/445 (48%), Gaps = 30/445 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL--HDLH 90
++ N SWNS+I+ ++ GD A R FSSM+ PT TF + + +L D+
Sbjct: 166 IEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVR 225
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+Q G D+FV S L+ ++K G LS ARK+F+++ RN V+ ++ G
Sbjct: 226 LLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM--ETRNAVTLNGLMVG 283
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD-----SVAIASVLSACSRVTVNG 205
V+ EA LF + N +D V + S S G
Sbjct: 284 LVRQKWGEEATKLFMDM---------------NSMIDVSPESYVILLSSFPEYSLAEEVG 328
Query: 206 VTEG--AHGFVIKRGF-DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ +G HG VI G D VG+GN L++ YA+ G + +R+VF M +KD+V+WNS+I
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
QNG EA++ + M + D+ + TL + L + A L +LG+ IH + +K+ ++
Sbjct: 389 GLDQNGCFIEAVERYKSM-RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 447
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRA-REALDLFYK 381
+V V +++ +Y + G ++ RK F+ M E + SW ++I R+ EA+ F
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLN 507
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
+AG + N ITF SVLSA S + G ++ + + NI ++ G+ G
Sbjct: 508 AQRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IHGLALKNNIADEATTENALIACYGKCG 566
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLL 466
++ + M + D V W S++
Sbjct: 567 EMDGCEKIFSRMAERRDNVTWNSMI 591
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 203/440 (46%), Gaps = 23/440 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD--LHSGKQ 94
N SW +++ +R G+ EAL M K + + F +++C + + G+Q
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKC-GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQ 153
H F + D VS+ LI MY KC G + A F +I ++N VSW S+++ Y Q
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDI--EVKNSVSWNSIISVYSQ 183
Query: 154 NDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN-GVTEGAHG 212
+ R A +F + S ++ F + V +ACS + + E
Sbjct: 184 AGDQRSAFRIFSSMQYD------GSRPTEYTFG-----SLVTTACSLTEPDVRLLEQIMC 232
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ K G +++ VG+ L+ A+A+ G + +RKVF+ M ++AVT N ++ + E
Sbjct: 233 TIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEE 292
Query: 273 ALDVFDQMVKSTDVKCNAVTL---SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI-VG 328
A +F M DV + + S ++A L+ G+ +H VI L + ++ +G
Sbjct: 293 ATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIG 352
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
+++MY KCG + AR+ F M +K+ SW +MI G + EA++ + M + +
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P T +S LS+C+ + G ++ + I+ V ++ L G L E
Sbjct: 413 PGSFTLISSLSSCASLKWAKLG-QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 449 LIEGMKVKADFVVWGSLLGA 468
+ M + D V W S++GA
Sbjct: 472 IFSSMP-EHDQVSWNSIIGA 490
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 176/384 (45%), Gaps = 33/384 (8%)
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H + + +DV++ + LI+ Y + G+ ARK+FDE+P +RN VSW +++GY +N
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP--LRNCVSWACIVSGYSRNG 81
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG--AHGF 213
+EAL+ ++ + E +F + A SVL AC + G+ G HG
Sbjct: 82 EHKEALVFLRDMVKE------------GIFSNQYAFVSVLRACQEIGSVGILFGRQIHGL 129
Query: 214 VIKRGFDSEVGVGNTLIDAYARG-GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+ K + + V N LI Y + G V + F + K++V+WNSII++Y+Q G
Sbjct: 130 MFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRS 189
Query: 273 ALDVFDQM----VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
A +F M + T+ ++ +A L + +L C + K L + VG
Sbjct: 190 AFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCT---IQKSGLLTDLFVG 246
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA-GV 387
+ ++ + K G + ARK FNQM+ +N + ++ G EA LF M V
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV 306
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY-----GCMVDLLGRAGK 442
P ++V +LS+ L +E H I G+ + +V++ + G
Sbjct: 307 SPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 443 LKEAYDLIEGMKVKADFVVWGSLL 466
+ +A + M K D V W S++
Sbjct: 365 IADARRVFYFMTDK-DSVSWNSMI 387
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
Query: 205 GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIY 264
G H + K D +V + N LI+AY G +RKVFD M ++ V+W I++ Y
Sbjct: 18 GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGY 77
Query: 265 AQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLA---IAHLGVLRLGKCIHDQVIKMDL 321
++NG EAL MVK + N +VL A I +G+L G+ IH + K+
Sbjct: 78 SRNGEHKEALVFLRDMVKE-GIFSNQYAFVSVLRACQEIGSVGIL-FGRQIHGLMFKLSY 135
Query: 322 EESVIVGTSIIDMYCKC-GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFY 380
+V +I MY KC G V A AF ++ KN SW ++I+ Y R A +F
Sbjct: 136 AVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFS 195
Query: 381 KMIKAGVRPNYITFVS-VLSACS 402
M G RP TF S V +ACS
Sbjct: 196 SMQYDGSRPTEYTFGSLVTTACS 218
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
N V LS V + H G R H ++ K L++ V + ++I+ Y + G ARK F
Sbjct: 3 NCVPLSFVQSCVGHRGAARF---FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVF 59
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
++M +N SW +++GY + +EAL M+K G+ N FVSVL AC G V
Sbjct: 60 DEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/641 (38%), Positives = 357/641 (55%), Gaps = 33/641 (5%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
T + L + N+F +NS+I E L F S+RK L TFP +K
Sbjct: 60 QTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLK 119
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI 141
+C+ G H GF+ DV ++L+ +YS G L+DA KLFDEIP R ++
Sbjct: 120 ACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR--SV 177
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
V+WT++ +GY + REA+ LFK+ + E G V DS I VLSAC V
Sbjct: 178 VTWTALFSGYTTSGRHREAIDLFKKMV----EMG--------VKPDSYFIVQVLSACVHV 225
Query: 202 TVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSII 261
E ++ + V TL++ YA+ G ++ +R VFD M+EKD VTW+++I
Sbjct: 226 GDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMI 285
Query: 262 AIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDL 321
YA N E +++F QM++ ++K + ++ L + A LG L LG+ + + +
Sbjct: 286 QGYASNSFPKEGIELFLQMLQE-NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEF 344
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYK 381
++ + ++IDMY KCG + + F +MKEK++ A I+G + + + +F +
Sbjct: 345 LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ 404
Query: 382 MIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAG 441
K G+ P+ TF+ +L C HAGL+Q+G + N + + ++ VEHYGCMVDL GRAG
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464
Query: 442 KLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSN 501
L +AY LI M ++ + +VWG+LL CR+ K+ L E K+L LEP N G +V LSN
Sbjct: 465 MLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSN 524
Query: 502 IYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEE 561
IY+ GRW++ R +M + + K PG+S +EL GKVH FL DK HP +KIY LE+
Sbjct: 525 IYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLED 584
Query: 562 LNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRV 603
L +++ +G+V V DV++EEKE L HSEKLA NLRV
Sbjct: 585 LGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRV 644
Query: 604 CGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CGDCH V++LISK+ REIVVRD+ RFH F +G CSC DYW
Sbjct: 645 CGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 104/262 (39%), Gaps = 43/262 (16%)
Query: 292 TLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
TL +V + HL K IH +I L + ++ Q + F+
Sbjct: 18 TLISVACTVNHL------KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHT 71
Query: 352 KEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACS--------- 402
+ N+ + ++I G+ + E LDLF + K G+ + TF VL AC+
Sbjct: 72 QFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI 131
Query: 403 --HAGLVQEGW-HWLNTMGHEFNIEPG------------------VEHYGCMVDLLGRAG 441
H+ +V+ G+ H + M +I G V + + +G
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG 191
Query: 442 KLKEAYDLIEG---MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELE-PNNCGYHV 497
+ +EA DL + M VK D +L AC ++D GE K + E+E N
Sbjct: 192 RHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRT 251
Query: 498 LLSNIYANAGRWEDVERTRSLM 519
L N+YA G+ +E+ RS+
Sbjct: 252 TLVNLYAKCGK---MEKARSVF 270
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/626 (36%), Positives = 348/626 (55%), Gaps = 33/626 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
NV WN ++ D + R F M+ + P + T+P +K+C L DL G+Q H
Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 513
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Q F + +V S LIDMY+K G+L A + + ++VSWT+M+ GY Q +
Sbjct: 514 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK--DVVSWTTMIAGYTQYNF 571
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
+AL F++ L + D V + + +SAC+ + + H
Sbjct: 572 DDKALTTFRQML------------DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 619
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
GF S++ N L+ Y+R G ++ S F+ D + WN++++ + Q+G EAL V
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 679
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F +M + + N T + + A + ++ GK +H + K + V ++I MY
Sbjct: 680 FVRMNRE-GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 738
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG + A K F ++ KN SW A+I Y H EALD F +MI + VRPN++T V
Sbjct: 739 KCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 798
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VLSACSH GLV +G + +M E+ + P EHY C+VD+L RAG L A + I+ M +K
Sbjct: 799 VLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIK 858
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
D +VW +LL AC +HKN+++GE AA L ELEP + +VLLSN+YA + +W+ + TR
Sbjct: 859 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTR 918
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
MK + + K PG S +E++ +H+F VGD+ HP ++I+EY ++L + E+GYV D
Sbjct: 919 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCF 978
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVV 618
S+++++ E+K+ + IHSEKLA NLRVC DCH I+ +SKV
Sbjct: 979 SLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVS 1038
Query: 619 DREIVVRDSKRFHYFKDGLCSCGDYW 644
+REI+VRD+ RFH+F+ G CSC DYW
Sbjct: 1039 NREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 219/439 (49%), Gaps = 22/439 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC---SALHDL 89
+ + +F+WN +I +LA E F M ++TP TF +++C S D+
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 205
Query: 90 HSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
+Q H + G V + LID+YS+ G + AR++FD + R+++ SW +M++
Sbjct: 206 --VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL--RLKDHSSWVAMIS 261
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
G +N+ EA+ LF + + + A +SVLSAC ++ + E
Sbjct: 262 GLSKNECEAEAIRLFCDMYVL------------GIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG V+K GF S+ V N L+ Y G++ + +F M ++DAVT+N++I +Q G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
+A+++F +M ++ ++ TL+++++A + G L G+ +H K+ + +
Sbjct: 370 GEKAMELFKRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
+++++Y KC ++ A F + + +NV W M+ YG+ R + +F +M + P
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
N T+ S+L C G ++ G +++ + N + ++D+ + GKL A+D+
Sbjct: 489 NQYTYPSILKTCIRLGDLELG-EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 450 IEGMKVKADFVVWGSLLGA 468
+ K D V W +++
Sbjct: 548 LIRFAGK-DVVSWTTMIAG 565
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 203/440 (46%), Gaps = 17/440 (3%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + + ++N++I L++ G +A+ F M L P +T + +CSA L G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
+Q H GF + + AL+++Y+KC ++ A F E + N+V W ML Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET--EVENVVLWNVMLVAYG 466
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
D+ R + +F++ +EE + + S+L C R+ + E H
Sbjct: 467 LLDDLRNSFRIFRQMQIEE------------IVPNQYTYPSILKTCIRLGDLELGEQIHS 514
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
+IK F V + LID YA+ G +D + + KD V+W ++IA Y Q +
Sbjct: 515 QIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK 574
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL F QM+ ++ + V L+ + A A L L+ G+ IH Q + +++
Sbjct: 575 ALTTFRQML-DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 633
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
+Y +CG+++ + AF Q + + +W A+++G+ EAL +F +M + G+ N
Sbjct: 634 TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 693
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
TF S + A S +++G ++ + + + E ++ + + G + +A
Sbjct: 694 TFGSAVKAASETANMKQGKQ-VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE 752
Query: 453 MKVKADFVVWGSLLGACRIH 472
+ K + V W +++ A H
Sbjct: 753 VSTKNE-VSWNAIINAYSKH 771
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 197/449 (43%), Gaps = 37/449 (8%)
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALH-DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
S+ + P T ++ C + L G++ H Q G + +S L D Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
G+L A K+FDE+P+ R I +W M+ + E LF + S
Sbjct: 134 GDLYGAFKVFDEMPE--RTIFTWNKMIKELASRNLIGEVFGLFVRMV------------S 179
Query: 182 DNVFVDSVAIASVLSACSRVTVN-GVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVD 240
+NV + + VL AC +V V E H ++ +G V N LID Y+R G VD
Sbjct: 180 ENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVD 239
Query: 241 VSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAI 300
++R+VFDG+ KD +W ++I+ ++N AEA+ +F M + S+VL A
Sbjct: 240 LARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY-VLGIMPTPYAFSSVLSAC 298
Query: 301 AHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWT 360
+ L +G+ +H V+K+ V +++ +Y G + A F+ M +++ ++
Sbjct: 299 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 358
Query: 361 AMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
+I G +A++LF +M G+ P+ T S++ ACS G + G L+ +
Sbjct: 359 TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG-QQLHAYTTK 417
Query: 421 FNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA----------CR 470
+ G +++L + ++ A D +V+ + V+W +L A R
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFR 476
Query: 471 IHKNVDLGEIAAKKLFELEPNNCGYHVLL 499
I + + + EI PN Y +L
Sbjct: 477 IFRQMQIEEIV--------PNQYTYPSIL 497
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 12/130 (9%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
V N SWN++I ++ G EAL +F M ++ P T + +CS H G
Sbjct: 753 VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS-----HIG 807
Query: 93 KQAHQQAFIFGFHRDVFVSS------ALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
A+ + + +S ++DM ++ G LS A++ E+P + +V W +
Sbjct: 808 LVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALV-WRT 866
Query: 147 MLTGYVQNDN 156
+L+ V + N
Sbjct: 867 LLSACVVHKN 876
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/637 (36%), Positives = 370/637 (58%), Gaps = 36/637 (5%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
T+F+ + + ++ SWNSVIA +A+ G VEA+ F + + L P + T +K+ S+L
Sbjct: 371 TVFDN-MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL 429
Query: 87 HD-LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
+ L KQ H A D FVS+ALID YS+ + +A LF+ + ++V+W
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE---RHNFDLVAWN 486
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M+ GY Q+ + + L LF L+ + E SD+ +A+V C +
Sbjct: 487 AMMAGYTQSHDGHKTLKLFA--LMHKQ-----GERSDDF-----TLATVFKTCGFLFAIN 534
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ H + IK G+D ++ V + ++D Y + G + ++ FD + D V W ++I+
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCI 594
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+NG A VF QM + V + T++ + A + L L G+ IH +K++
Sbjct: 595 ENGEEERAFHVFSQM-RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDP 653
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
VGTS++DMY KCG +D A F +++ N+ +W AM+ G H +E L LF +M
Sbjct: 654 FVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSL 713
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
G++P+ +TF+ VLSACSH+GLV E + + +M ++ I+P +EHY C+ D LGRAG +K+
Sbjct: 714 GIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQ 773
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A +LIE M ++A ++ +LL ACR+ + + G+ A KL ELEP + +VLLSN+YA
Sbjct: 774 AENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAA 833
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
A +W++++ R++MK ++ K PGFS +E++ K+H F+V D+ + Q E IY ++++
Sbjct: 834 ASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRD 893
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
+++ GYV + + DV++EEKE L HSEKLA NLRVCGDC
Sbjct: 894 IKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDC 953
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H ++ I+KV +REIV+RD+ RFH FKDG+CSCGDYW
Sbjct: 954 HNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 198/430 (46%), Gaps = 27/430 (6%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFI 101
N +++ G L+ F+ M + + + TF + + + L G+Q H A
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 102 FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREAL 161
G + VS++LI+MY K + AR +FD + + R+++SW S++ G QN EA+
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE--RDLISWNSVIAGIAQNGLEVEAV 401
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVN-GVTEGAHGFVIKRGFD 220
LF + L CG + D + SVL A S + +++ H IK
Sbjct: 402 CLFMQLL----RCG--------LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNV 449
Query: 221 SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
S+ V LIDAY+R + + +F+ D V WN+++A Y Q+ + L +F M
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
K + + + TL+ V L + GK +H IK + + V + I+DMY KCG
Sbjct: 509 HKQGE-RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 567
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+ A+ AF+ + + +WT MI+G + A +F +M GV P+ T ++ A
Sbjct: 568 MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKA 627
Query: 401 CSHAGLVQEGWHW-LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL---IEGMKVK 456
S +++G N + +P V +VD+ + G + +AY L IE M +
Sbjct: 628 SSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNIT 685
Query: 457 ADFVVWGSLL 466
A W ++L
Sbjct: 686 A----WNAML 691
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 228/531 (42%), Gaps = 84/531 (15%)
Query: 9 VSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSV-----EALRAFSS 63
+++++S K + T +F+K D++ V SWNS++A A+ + V +A F
Sbjct: 77 INNLISMYSKCGSLTYARRVFDKMPDRDLV-SWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 64 MRKLSLTPTRSTFPCAIKSCSALHDLHSG-----KQAHQQAFIFGFHRDVFVSSALIDMY 118
+R+ + +R T +K C LHSG + H A G D FV+ AL+++Y
Sbjct: 136 LRQDVVYTSRMTLSPMLKLC-----LHSGYVWASESFHGYACKIGLDGDEFVAGALVNIY 190
Query: 119 SKCGELSDARKLFD-----------------------------------------EIPQR 137
K G++ + + LF+ EI R
Sbjct: 191 LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLR 250
Query: 138 IRNIVSWTSMLTGYVQ-----NDNAREALLLFKEFLLEESECGG---------ASENSDN 183
+ +S G V+ ND + + ++F+ L E G A +
Sbjct: 251 LLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESD 310
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V D V +L+ +V + + H +K G D + V N+LI+ Y + +R
Sbjct: 311 VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFAR 370
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
VFD M E+D ++WNS+IA AQNGL EA+ +F Q+++ +K + T+++VL A + L
Sbjct: 371 TVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR-CGLKPDQYTMTSVLKAASSL 429
Query: 304 GV-LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAM 362
L L K +H IK++ V T++ID Y + + A F + ++ +W AM
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAM 488
Query: 363 IAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
+AGY + L LF M K G R + T +V C + +G H +
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG-----KQVHAYA 543
Query: 423 IEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGAC 469
I+ G + ++D+ + G + A + + V D V W +++ C
Sbjct: 544 IKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD-VAWTTMISGC 593
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
DL GK H + F + + F+ + LI MYSKCG L+ AR++FD++P R ++VSW S+
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR--DLVSWNSI 111
Query: 148 LTGYVQN-----DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
L Y Q+ +N ++A LLF+ +L + D V+ + ++ +L C
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFR--ILRQ----------DVVYTSRMTLSPMLKLCLHSG 159
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+E HG+ K G D + V L++ Y + G V + +F+ M +D V WN ++
Sbjct: 160 YVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
Y + G EA+D+ S+ + N +TL
Sbjct: 220 AYLEMGFKEEAIDL-SSAFHSSGLNPNEITL 249
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
L LGKC H +++ + + ++I MY KCG + AR+ F++M ++++ SW +++A
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 366 YGMHCRA-----REALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHE 420
Y ++A LF + + V + +T +L C H+G V W + H
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-----WASESFHG 169
Query: 421 FNIEPGVEH----YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
+ + G++ G +V++ + GK+KE L E M + D V+W +L A
Sbjct: 170 YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 249/664 (37%), Positives = 367/664 (55%), Gaps = 68/664 (10%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIKSCSALHDLHS 91
+ + NV SW S+I AR + +A+ F M R +TP T C I +C+ L DL +
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 92 GKQAHQQAFI--FGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLT 149
G++ + AFI G + + SAL+DMY KC + A++LFDE N+ +M +
Sbjct: 255 GEKVY--AFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGAS--NLDLCNAMAS 310
Query: 150 GYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG 209
YV+ REAL +F L+ +S V D +++ S +S+CS++ +
Sbjct: 311 NYVRQGLTREALGVFN--LMMDS----------GVRPDRISMLSAISSCSQLRNILWGKS 358
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG- 268
HG+V++ GF+S + N LID Y + D + ++FD M K VTWNSI+A Y +NG
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 269 ------------------------------LAAEALDVFDQMVKSTDVKCNAVTLSAVLL 298
L EA++VF M V + VT+ ++
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 299 AIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRS 358
A HLG L L K I+ + K ++ V +GT+++DM+ +CG + A FN + ++V +
Sbjct: 479 ACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 538
Query: 359 WTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMG 418
WTA I M A A++LF MI+ G++P+ + FV L+ACSH GLVQ+G +M
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSML 598
Query: 419 HEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLG 478
+ P HYGCMVDLLGRAG L+EA LIE M ++ + V+W SLL ACR+ NV++
Sbjct: 599 KLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
Query: 479 EIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGK 538
AA+K+ L P G +VLLSN+YA+AGRW D+ + R MK + L K PG S +++RGK
Sbjct: 659 AYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGK 718
Query: 539 VHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKL 598
H F GD+ HP+ I L+E++ + +G+V D+++V+ DVD++EK L HSEKL
Sbjct: 719 THEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKL 778
Query: 599 A------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSC 640
A NLRVC DCH+ + SKV +REI++RD+ RFHY + G CSC
Sbjct: 779 AMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSC 838
Query: 641 GDYW 644
GD+W
Sbjct: 839 GDFW 842
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 241/496 (48%), Gaps = 61/496 (12%)
Query: 7 SSVSSVVSNVDKHSTNTNLTTLFNKYVDKNN-----VFSWNSVIADLARGGDSVEALRAF 61
S+++ +V+ + T +L+ F K V +N+ F +NS+I A G EA+ F
Sbjct: 65 STITKLVARSCELGTRESLS--FAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF 122
Query: 62 SSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKC 121
M ++P + TFP + +C+ +G Q H G+ +D+FV ++L+ Y++C
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 182
Query: 122 GELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENS 181
GEL ARK+FDE+ + RN+VSWTSM+ GY + D A++A+ LF + +E
Sbjct: 183 GELDSARKVFDEMSE--RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE--------- 231
Query: 182 DNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDV 241
V +SV + V+SAC+++ E + F+ G + + + L+D Y + +DV
Sbjct: 232 --VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 242 SRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA 301
++++FD + N++ + Y + GL EAL VF+ M+ S V+ + +++ + + + +
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS-GVRPDRISMLSAISSCS 348
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKC----------------------- 338
L + GK H V++ E + ++IDMY KC
Sbjct: 349 QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS 408
Query: 339 --------GQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKM-IKAGVRP 389
G+VD A + F M EKN+ SW +I+G EA+++F M + GV
Sbjct: 409 IVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA 468
Query: 390 NYITFVSVLSACSHAG---LVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEA 446
+ +T +S+ SAC H G L + ++++ G + ++ G +VD+ R G + A
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTT----LVDMFSRCGDPESA 524
Query: 447 YDLIEGMKVKADFVVW 462
+ + + D W
Sbjct: 525 MSIFNSLTNR-DVSAW 539
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 212/427 (49%), Gaps = 36/427 (8%)
Query: 72 TRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCG---ELSDAR 128
T++T P ++K+C + +L K H+ G DV + L+ + G LS A+
Sbjct: 32 TKAT-PSSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAK 87
Query: 129 KLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDS 188
++F E + + S++ GY + EA+LLF + + + D
Sbjct: 88 EVF-ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMM------------NSGISPDK 134
Query: 189 VAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDG 248
LSAC++ G HG ++K G+ ++ V N+L+ YA G +D +RKVFD
Sbjct: 135 YTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDE 194
Query: 249 MIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL 308
M E++ V+W S+I YA+ A +A+D+F +MV+ +V N+VT+ V+ A A L L
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 309 GKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGM 368
G+ ++ + +E + ++ ++++DMY KC +D+A++ F++ N+ AM + Y
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 369 HCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVE 428
REAL +F M+ +GVRP+ I+ +S +S+CS + G H + + G E
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG-----KSCHGYVLRNGFE 369
Query: 429 HY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEI-AAK 483
+ ++D+ + + A+ + + M K V W S++ V+ GE+ AA
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVAG-----YVENGEVDAAW 423
Query: 484 KLFELEP 490
+ FE P
Sbjct: 424 ETFETMP 430
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 178/374 (47%), Gaps = 32/374 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++Y +N+ N++ ++ R G + EAL F+ M + P R + AI SCS L
Sbjct: 293 LFDEY-GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLR 351
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
++ GK H GF + +ALIDMY KC A ++FD + + +V+W S+
Sbjct: 352 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK--TVVTWNSI 409
Query: 148 LTGYVQNDNAREALLLFKEF-------------------LLEES-ECGGASENSDNVFVD 187
+ GYV+N A F+ L EE+ E + ++ + V D
Sbjct: 410 VAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNAD 469
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
V + S+ SAC + + + + ++ K G +V +G TL+D ++R G + + +F+
Sbjct: 470 GVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ +D W + I A G A A+++FD M++ +K + V L A +H G+++
Sbjct: 530 SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ-GLKPDGVAFVGALTACSHGGLVQ 588
Query: 308 LGKCIHDQVIKMD--LEESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIA 364
GK I ++K+ E V G ++D+ + G ++ A + M E N W +++A
Sbjct: 589 QGKEIFYSMLKLHGVSPEDVHYGC-MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLA 647
Query: 365 GYGMHCRAREALDL 378
CR + +++
Sbjct: 648 A----CRVQGNVEM 657
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/646 (37%), Positives = 369/646 (57%), Gaps = 43/646 (6%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-----SLTPTRSTFP 77
TN +F K + NV SWN+++ + GD+ F +R++ + T
Sbjct: 344 TNAQMIF-KMNNNKNVVSWNTMVGGFSAEGDTHGT---FDVLRQMLAGGEDVKADEVTIL 399
Query: 78 CAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
A+ C L S K+ H + F + V++A + Y+KCG LS A+++F I R
Sbjct: 400 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI--R 457
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
+ + SW +++ G+ Q+++ R +L + + + DS + S+LSA
Sbjct: 458 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS------------GLLPDSFTVCSLLSA 505
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
CS++ + + HGF+I+ + ++ V +++ Y G + + +FD M +K V+W
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
N++I Y QNG AL VF QMV C +++ V A + L LRLG+ H +
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLC-GISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
K LE+ + S+IDMY K G + + K FN +KEK+ SW AMI GYG+H A+EA+
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 684
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLL 437
LF +M + G P+ +TF+ VL+AC+H+GL+ EG +L+ M F ++P ++HY C++D+L
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 744
Query: 438 GRAGKLKEAYDLI-EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYH 496
GRAG+L +A ++ E M +AD +W SLL +CRIH+N+++GE A KLFELEP +
Sbjct: 745 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENY 804
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
VLLSN+YA G+WEDV + R M L K G S +EL KV +F+VG++ E+I
Sbjct: 805 VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIK 864
Query: 557 EYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------------- 599
L +K+ ++GY D SV HD+ +EEK LR HSEKLA
Sbjct: 865 SLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVY 924
Query: 600 -NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+C DCH +LISKV++REIVVRD+KRFH+FK+G+CSCGDYW
Sbjct: 925 KNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 216/437 (49%), Gaps = 24/437 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSALHDLHSGKQA 95
N+F WN+VI+ +R E L F M + L P T+PC IK+C+ + D+ G
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 96 HQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
H G DVFV +AL+ Y G ++DA +LFD +P+ RN+VSW SM+ + N
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE--RNLVSWNSMIRVFSDNG 267
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVA-IASVLSACSRVTVNGVTEGAHGFV 214
+ E+ LL E + EN D F+ VA + +VL C+R G+ +G HG+
Sbjct: 268 FSEESFLLLGEMM---------EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA 318
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
+K D E+ + N L+D Y++ G + ++ +F K+ V+WN+++ ++ G
Sbjct: 319 VKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTF 378
Query: 275 DVFDQMVK-STDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIID 333
DV QM+ DVK + VT+ + H L K +H +K + + +V + +
Sbjct: 379 DVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVA 438
Query: 334 MYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYIT 393
Y KCG + A++ F+ ++ K V SW A+I G+ R +LD +M +G+ P+ T
Sbjct: 439 SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFT 498
Query: 394 FVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEH----YGCMVDLLGRAGKLKEAYDL 449
S+LSACS ++ L H F I +E Y ++ L G+L L
Sbjct: 499 VCSLLSACSKLKSLR-----LGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 450 IEGMKVKADFVVWGSLL 466
+ M+ K+ V W +++
Sbjct: 554 FDAMEDKS-LVSWNTVI 569
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 236/486 (48%), Gaps = 32/486 (6%)
Query: 10 SSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKL-- 67
+++VS H T+ LF+ + + N+ SWNS+I + G S E+ M +
Sbjct: 226 NALVSFYGTHGFVTDALQLFD-IMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENG 284
Query: 68 --SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELS 125
+ P +T + C+ ++ GK H A +++ +++AL+DMYSKCG ++
Sbjct: 285 DGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCIT 344
Query: 126 DARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVF 185
+A+ +F +N+VSW +M+ G+ + + ++ L GG ++V
Sbjct: 345 NAQMIFKM--NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML-----AGG-----EDVK 392
Query: 186 VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV 245
D V I + + C + + H + +K+ F V N + +YA+ G + +++V
Sbjct: 393 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 452
Query: 246 FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGV 305
F G+ K +WN++I +AQ+ +LD QM K + + ++ T+ ++L A + L
Sbjct: 453 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACSKLKS 511
Query: 306 LRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAG 365
LRLGK +H +I+ LE + V S++ +Y CG++ + F+ M++K++ SW +I G
Sbjct: 512 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITG 571
Query: 366 YGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP 425
Y + AL +F +M+ G++ I+ + V ACS ++ L H + ++
Sbjct: 572 YLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR-----LGREAHAYALKH 626
Query: 426 GVE---HYGC-MVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
+E C ++D+ + G + ++ + G+K K+ W +++ IH
Sbjct: 627 LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST-ASWNAMIMGYGIHGLAK----E 681
Query: 482 AKKLFE 487
A KLFE
Sbjct: 682 AIKLFE 687
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 168/343 (48%), Gaps = 23/343 (6%)
Query: 73 RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHR---DVFVSSALIDMYSKCGELSDARK 129
R +++ D+ G++ HQ + G R D + + +I MY+ CG D+R
Sbjct: 84 REALGLLLQASGKRKDIEMGRKIHQ--LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF 141
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSV 189
+FD + R +N+ W ++++ Y +N+ E L F E + ++ ++ D
Sbjct: 142 VFDAL--RSKNLFQWNAVISSYSRNELYDEVLETFIEMI-----------STTDLLPDHF 188
Query: 190 AIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
V+ AC+ ++ G+ HG V+K G +V VGN L+ Y G V + ++FD M
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 250 IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTD---VKCNAVTLSAVLLAIAHLGVL 306
E++ V+WNS+I +++ NG + E+ + +M++ + TL VL A +
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
LGK +H +K+ L++ +++ +++DMY KCG + A+ F KNV SW M+ G+
Sbjct: 309 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 368
Query: 367 GMHCRAREALDLFYKMIKAG--VRPNYITFVSVLSACSHAGLV 407
D+ +M+ G V+ + +T ++ + C H +
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 16/249 (6%)
Query: 229 LIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC 288
+I YA G D SR VFD + K+ WN++I+ Y++N L E L+ F +M+ +TD+
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 289 NAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAF 348
+ T V+ A A + + +G +H V+K L E V VG +++ Y G V A + F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 349 NQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIK----AGVRPNYITFVSVLSACSHA 404
+ M E+N+ SW +MI + + + E+ L +M++ P+ T V+VL C+
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 405 -----GLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
G GW + E + ++D+ + G + A +I M +
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLN------NALMDMYSKCGCITNA-QMIFKMNNNKNV 358
Query: 460 VVWGSLLGA 468
V W +++G
Sbjct: 359 VSWNTMVGG 367
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/638 (36%), Positives = 360/638 (56%), Gaps = 41/638 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW+++++ GD +L FS M + + P TF +K+C L+ L G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
Q H GF V V ++L+DMYSKCG +++A K+F I R +++SW +M+ G+V
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDR--SLISWNAMIAGFV 184
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+AL F G E + D + S+L ACS + + HG
Sbjct: 185 HAGYGSKALDTF----------GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 213 FVIKRGF--DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
F+++ GF S + +L+D Y + G++ +RK FD + EK ++W+S+I YAQ G
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 294
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMD--LEESVIVG 328
EA+ +F ++ + + + ++ LS+++ A +LR GK + +K+ LE SV+
Sbjct: 295 VEAMGLFKRL-QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL-- 351
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVR 388
S++DMY KCG VD A K F +M+ K+V SWT +I GYG H ++++ +FY+M++ +
Sbjct: 352 NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 411
Query: 389 PNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYD 448
P+ + +++VLSACSH+G+++EG + + I+P VEHY C+VDLLGRAG+LKEA
Sbjct: 412 PDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKH 471
Query: 449 LIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGR 508
LI+ M +K + +W +LL CR+H +++LG+ K L ++ N +V++SN+Y AG
Sbjct: 472 LIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGY 531
Query: 509 WEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL-Q 567
W + R L + L K G S VE+ +VH F G+ HP I E L+E +L +
Sbjct: 532 WNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLRE 591
Query: 568 EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA---------------------NLRVCGD 606
E+GYV + +HD+D E KE LR HSEKLA NLRVC D
Sbjct: 592 ELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVD 651
Query: 607 CHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
CH I+ +SK+ VVRD+ RFH F+DG CSCGDYW
Sbjct: 652 CHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 222/440 (50%), Gaps = 35/440 (7%)
Query: 73 RSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFD 132
R ++ C+ G Q H G ++ S+ LIDMY KC E A K+FD
Sbjct: 6 RQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFD 65
Query: 133 EIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIA 192
+P+ RN+VSW+++++G+V N + + +L LF E ++ + +
Sbjct: 66 SMPE--RNVVSWSALMSGHVLNGDLKGSLSLFSEM------------GRQGIYPNEFTFS 111
Query: 193 SVLSACSRVTVNGVTEG--AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMI 250
+ L AC +N + +G HGF +K GF+ V VGN+L+D Y++ G ++ + KVF ++
Sbjct: 112 TNLKACG--LLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV 169
Query: 251 EKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKST-DVKCNAVTLSAVLLAIAHLGVLRLG 309
++ ++WN++IA + G ++ALD F M ++ + + TL+++L A + G++ G
Sbjct: 170 DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG 229
Query: 310 KCIHDQVIKMDL--EESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
K IH +++ S + S++D+Y KCG + ARKAF+Q+KEK + SW+++I GY
Sbjct: 230 KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYA 289
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
EA+ LF ++ + + + S++ + L+++G + G+
Sbjct: 290 QEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ---MQALAVKLPSGL 346
Query: 428 EH--YGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKL 485
E +VD+ + G + EA M++K D + W ++ H LG+ + +
Sbjct: 347 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKH---GLGKKSVRIF 402
Query: 486 FEL-----EPNNCGYHVLLS 500
+E+ EP+ Y +LS
Sbjct: 403 YEMLRHNIEPDEVCYLAVLS 422
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/540 (41%), Positives = 332/540 (61%), Gaps = 32/540 (5%)
Query: 124 LSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDN 183
+S A K+F +I + I N+ W +++ GY + N+ A L++E + S
Sbjct: 69 MSYAHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRV-----------SGL 116
Query: 184 VFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSR 243
V D+ ++ A + + + E H VI+ GF S + V N+L+ YA G V +
Sbjct: 117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY 176
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
KVFD M EKD V WNS+I +A+NG EAL ++ +M S +K + T+ ++L A A +
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKI 235
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
G L LGK +H +IK+ L ++ ++D+Y +CG+V+ A+ F++M +KN SWT++I
Sbjct: 236 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLI 295
Query: 364 AGYGMHCRAREALDLF-YKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN 422
G ++ +EA++LF Y G+ P ITFV +L ACSH G+V+EG+ + M E+
Sbjct: 296 VGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYK 355
Query: 423 IEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAA 482
IEP +EH+GCMVDLL RAG++K+AY+ I+ M ++ + V+W +LLGAC +H + DL E A
Sbjct: 356 IEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFAR 415
Query: 483 KKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAF 542
++ +LEPN+ G +VLLSN+YA+ RW DV++ R M + K PG SLVE+ +VH F
Sbjct: 416 IQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEF 475
Query: 543 LVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA--- 599
L+GDK HPQ + IY L+E+ +L+ GYV +++V DV++EEKE + HSEK+A
Sbjct: 476 LMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAF 535
Query: 600 ---------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH I+L+SKV +REIVVRD RFH+FK+G CSC DYW
Sbjct: 536 MLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 179/345 (51%), Gaps = 17/345 (4%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLT-PTRSTFPCAIKSCSAL 86
+F+K NVF WN++I A G+S+ A + MR L P T+P IK+ + +
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM 134
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
D+ G+ H GF ++V ++L+ +Y+ CG+++ A K+FD++P+ +++V+W S
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWNS 192
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
++ G+ +N EAL L+ E NS + D I S+LSAC+++ +
Sbjct: 193 VINGFAENGKPEEALALYTEM------------NSKGIKPDGFTIVSLLSACAKIGALTL 240
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H ++IK G + N L+D YAR G V+ ++ +FD M++K++V+W S+I A
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 300
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLG-KCIHDQVIKMDLEESV 325
NG EA+++F M + + +T +L A +H G+++ G + + +E +
Sbjct: 301 NGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRI 360
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
++D+ + GQV A + M + NV W ++ +H
Sbjct: 361 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLS-LTPTRSTFPCAIKSCSA 85
TLF++ VDKN+V SW S+I LA G EA+ F M L P TF + +CS
Sbjct: 278 TLFDEMVDKNSV-SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 86 LHDLHSGKQAHQQAF-IFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSW 144
+ G + ++ + + ++D+ ++ G++ A + +P + N+V W
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ-PNVVIW 395
Query: 145 TSML 148
++L
Sbjct: 396 RTLL 399
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/636 (35%), Positives = 356/636 (55%), Gaps = 35/636 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF + +K++V ++N++I + G E++ F MR+ P+ TF +K+ LH
Sbjct: 206 LFEEIPEKDSV-TFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D G+Q H + GF RD V + ++D YSK + + R LFDE+P+ + VS+ +
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE--LDFVSYNVV 322
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++ Y Q D +L F+E +C G + A++LS + ++ +
Sbjct: 323 ISSYSQADQYEASLHFFREM-----QCMGFDRR-------NFPFATMLSIAANLSSLQMG 370
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQN 267
H + DS + VGN+L+D YA+ + + +F + ++ V+W ++I+ Y Q
Sbjct: 371 RQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK 430
Query: 268 GLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIV 327
GL L +F +M + ++++ + T + VL A A L LGK +H +I+ E+V
Sbjct: 431 GLHGAGLKLFTKM-RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489
Query: 328 GTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGV 387
G+ ++DMY KCG + A + F +M ++N SW A+I+ + + A+ F KMI++G+
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGL 549
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+P+ ++ + VL+ACSH G V++G + M + I P +HY CM+DLLGR G+ EA
Sbjct: 550 QPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAE 609
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP-NNCGYHVLLSNIYANA 506
L++ M + D ++W S+L ACRIHKN L E AA+KLF +E + +V +SNIYA A
Sbjct: 610 KLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAA 669
Query: 507 GRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL 566
G WE V + M+ R + K P +S VE+ K+H F D+ HP ++I + EL ++
Sbjct: 670 GEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEI 729
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+ GY D +SV+ DVD++ K +L+ HSE+LA NLR C DCH
Sbjct: 730 EREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCH 789
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
I+LISK+V REI VRD+ RFH+F +G+CSCGDYW
Sbjct: 790 AAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 222/477 (46%), Gaps = 32/477 (6%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRA 60
M + S ++++S K ++ LF+ D+ V +W ++ AR EA +
Sbjct: 74 MPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRT-VVTWTILMGWYARNSHFDEAFKL 132
Query: 61 FSSM-RKLSLT-PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVF--VSSALID 116
F M R S T P TF + C+ ++ Q H A GF + F VS+ L+
Sbjct: 133 FRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLK 192
Query: 117 MYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGG 176
Y + L A LF+EIP+ ++ V++ +++TGY ++ E++ LF L+ + G
Sbjct: 193 SYCEVRRLDLACVLFEEIPE--KDSVTFNTLITGYEKDGLYTESIHLF----LKMRQSG- 245
Query: 177 ASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
+ SD F + VL A + + + H + GF + VGN ++D Y++
Sbjct: 246 -HQPSDFTF------SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKH 298
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
V +R +FD M E D V++N +I+ Y+Q +L F +M + + +
Sbjct: 299 DRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM-QCMGFDRRNFPFATM 357
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L A+L L++G+ +H Q + + + VG S++DMY KC + A F + ++
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT 417
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA-CSHAGLVQEGWHWLN 415
SWTA+I+GY L LF KM + +R + TF +VL A S A L+ L
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL------LG 471
Query: 416 TMGHEFNIEPG----VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
H F I G V +VD+ + G +K+A + E M + + V W +L+ A
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISA 527
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 176/402 (43%), Gaps = 58/402 (14%)
Query: 103 GFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR------------------------- 137
GF D S+ +++ + G++S ARK++DE+P +
Sbjct: 43 GFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLF 102
Query: 138 ----IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIAS 193
R +V+WT ++ Y +N + EA LF++ + S C D V +
Sbjct: 103 DAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ-MCRSSSC---------TLPDHVTFTT 152
Query: 194 VLSACSRVTVNGVTEGAHGFVIKRGFDSE--VGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
+L C+ H F +K GFD+ + V N L+ +Y +D++ +F+ + E
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
KD+VT+N++I Y ++GL E++ +F +M +S + T S VL A+ L LG+
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSD-FTFSGVLKAVVGLHDFALGQQ 271
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
+H + VG I+D Y K +V R F++M E + S+ +I+ Y +
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 372 AREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP------ 425
+L F +M G F ++LS ++ +Q MG + + +
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQ--------MGRQLHCQALLATAD 383
Query: 426 GVEHYG-CMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ H G +VD+ + +EA + + + + V W +L+
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT-VSWTALI 424
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 34/221 (15%)
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKV---------------------------- 245
+IK GFD++ N +++ R G V +RKV
Sbjct: 39 IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSA 98
Query: 246 ---FDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKC-NAVTLSAVLLAIA 301
FD M ++ VTW ++ YA+N EA +F QM +S+ + VT + +L
Sbjct: 99 RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
Query: 302 HLGVLRLGKCIHDQVIKM--DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSW 359
+H +K+ D + V ++ YC+ ++DLA F ++ EK+ ++
Sbjct: 159 DAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTF 218
Query: 360 TAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
+I GY E++ LF KM ++G +P+ TF VL A
Sbjct: 219 NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 40.0 bits (92), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 33/123 (26%)
Query: 315 QVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKN------------------- 355
++IK + I++ + GQV ARK +++M KN
Sbjct: 38 RIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSS 97
Query: 356 ------------VRSWTAMIAGYGMHCRAREALDLFYKMIKAG--VRPNYITFVSVLSAC 401
V +WT ++ Y + EA LF +M ++ P+++TF ++L C
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 402 SHA 404
+ A
Sbjct: 158 NDA 160
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 249/696 (35%), Positives = 381/696 (54%), Gaps = 90/696 (12%)
Query: 4 SKS-SSVSSVVSNVDKHSTNTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFS 62
SKS SS +S+V+ + + LF++ D+N + SWN +++ + G+ EA + F
Sbjct: 45 SKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN-IISWNGLVSGYMKNGEIDEARKVFD 103
Query: 63 SMRKLSLTPTRSTFPCAIKSCSALHD--LHSGK---------------QAHQQAFIFGF- 104
L P R+ + S +AL +H+GK + + GF
Sbjct: 104 ------LMPERN-----VVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFL 152
Query: 105 ----------------HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
+D +++I K G + +AR++FDE+ +R ++++WT+M+
Sbjct: 153 QDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSER--SVITWTTMV 210
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
TGY QN+ +A +F + + E++E V+ S+L + NG E
Sbjct: 211 TGYGQNNRVDDARKIF-DVMPEKTE---------------VSWTSMLMGYVQ---NGRIE 251
Query: 209 GAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNG 268
A + N +I + G + +R+VFD M E++ +W ++I I+ +NG
Sbjct: 252 DAEELFEVMPVKPVIAC-NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNG 310
Query: 269 LAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVG 328
EALD+F M K V+ TL ++L A L L GK +H Q+++ + V V
Sbjct: 311 FELEALDLFILMQKQ-GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA 369
Query: 329 TSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG-V 387
+ ++ MY KCG++ ++ F++ K++ W ++I+GY H EAL +F +M +G
Sbjct: 370 SVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGST 429
Query: 388 RPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAY 447
+PN +TFV+ LSACS+AG+V+EG +M F ++P HY CMVD+LGRAG+ EA
Sbjct: 430 KPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAM 489
Query: 448 DLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAG 507
++I+ M V+ D VWGSLLGACR H +D+ E AKKL E+EP N G ++LLSN+YA+ G
Sbjct: 490 EMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQG 549
Query: 508 RWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD-KEHPQHEKIYEYLEELNVKL 566
RW DV R LMK R + K+PG S E+ KVHAF G HP+ E I + L+EL+ L
Sbjct: 550 RWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLL 609
Query: 567 QEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCH 608
+E GY D + +HDVD+EEK +L+ HSE+LA NLRVC DCH
Sbjct: 610 REAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCH 669
Query: 609 TVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
T I++ISKV +REI++RD+ RFH+F++G CSC DYW
Sbjct: 670 TAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 216/472 (45%), Gaps = 64/472 (13%)
Query: 42 NSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH----- 96
N I L+R G EA + F S C KS S+ + + +G A+
Sbjct: 21 NVRITHLSRIGKIHEARKLFDS--------------CDSKSISSWNSMVAGYFANLMPRD 66
Query: 97 -QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQND 155
++ F R++ + L+ Y K GE+ +ARK+FD +P+ RN+VSWT+++ GYV N
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPE--RNVVSWTALVKGYVHNG 124
Query: 156 NAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVI 215
A LF + + E+++ + + + + AC +
Sbjct: 125 KVDVAESLFWK-MPEKNKVSWTV-----MLIGFLQDGRIDDACK--------------LY 164
Query: 216 KRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALD 275
+ D + ++I + G VD +R++FD M E+ +TW +++ Y QN +A
Sbjct: 165 EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARK 224
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMY 335
+FD M + T+ V+ +++L+ G + +++ ++ + VI ++I
Sbjct: 225 IFDVMPEKTE-----VSWTSMLMGYVQNGRIEDA----EELFEVMPVKPVIACNAMISGL 275
Query: 336 CKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFV 395
+ G++ AR+ F+ MKE+N SW +I + + EALDLF M K GVRP + T +
Sbjct: 276 GQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLI 335
Query: 396 SVLSACSHAGLVQEGWHWLNTMGH-EFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMK 454
S+LS C+ + G + +F+++ V ++ + + G+L ++ + +
Sbjct: 336 SILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA--SVLMTMYIKCGELVKSKLIFDRFP 393
Query: 455 VKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL------EPNNCGYHVLLS 500
K D ++W S++ H LGE A K E+ +PN + LS
Sbjct: 394 SK-DIIMWNSIISGYASH---GLGEEALKVFCEMPLSGSTKPNEVTFVATLS 441
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 131/311 (42%), Gaps = 59/311 (18%)
Query: 213 FVIKRGFDSEVG--VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
+++R + + + N I +R G + +RK+FD K +WNS++A Y N +
Sbjct: 5 ILLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMP 64
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+A +FD+M + ++I
Sbjct: 65 RDARKLFDEMP----------------------------------------DRNIISWNG 84
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ Y K G++D ARK F+ M E+NV SWTA++ GY + + A LF+KM + N
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----N 140
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+++ +L G + + + + NI M+ L + G++ EA ++
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIA-----RTSMIHGLCKEGRVDEAREIF 195
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP--NNCGYHVLLSNIYANAGR 508
+ M ++ + W +++ + VD A+K+F++ P + +L Y GR
Sbjct: 196 DEMSERS-VITWTTMVTGYGQNNRVD----DARKIFDVMPEKTEVSWTSMLMG-YVQNGR 249
Query: 509 WEDVERTRSLM 519
ED E +M
Sbjct: 250 IEDAEELFEVM 260
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/637 (38%), Positives = 355/637 (55%), Gaps = 53/637 (8%)
Query: 29 FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD 88
K D++ +F N +IA R GD ALR F MR + S K S + +
Sbjct: 52 LTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMME 111
Query: 89 LHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSML 148
H Q F D F + ++ Y + A+ FD +P ++ SW +M+
Sbjct: 112 AH-------QLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP--FKDAASWNTMI 162
Query: 149 TGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTE 208
TGY + +A LF ++E++E V+ +++S + + +
Sbjct: 163 TGYARRGEMEKARELFYS-MMEKNE---------------VSWNAMISG--YIECGDLEK 204
Query: 209 GAHGFVIK--RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYA 265
+H F + RG V +I Y + V+++ +F M + K+ VTWN++I+ Y
Sbjct: 205 ASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYV 260
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESV 325
+N + L +F M++ ++ N+ LS+ LL + L L+LG+ IH V K L V
Sbjct: 261 ENSRPEDGLKLFRAMLEE-GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDV 319
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
TS+I MYCKCG++ A K F MK+K+V +W AMI+GY H A +AL LF +MI
Sbjct: 320 TALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDN 379
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKE 445
+RP++ITFV+VL AC+HAGLV G + +M ++ +EP +HY CMVDLLGRAGKL+E
Sbjct: 380 KIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEE 439
Query: 446 AYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYAN 505
A LI M + V+G+LLGACR+HKNV+L E AA+KL +L N +V L+NIYA+
Sbjct: 440 ALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYAS 499
Query: 506 AGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVK 565
RWEDV R R MK + K PG+S +E+R KVH F D+ HP+ + I++ L+EL K
Sbjct: 500 KNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKK 559
Query: 566 LQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDC 607
++ GY ++ +H+V++E+KE L HSEKLA NLR+CGDC
Sbjct: 560 MKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDC 619
Query: 608 HTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
H I+ IS++ REI+VRD+ RFH+FKDG CSCGDYW
Sbjct: 620 HKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
+F N+ +WN++I+ + L+ F +M + + P S A+ CS L
Sbjct: 238 AMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSEL 297
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L G+Q HQ DV ++LI MY KCGEL DA KLF+ + + +++V+W +
Sbjct: 298 SALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK--KDVVAWNA 355
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV-TVNG 205
M++GY Q+ NA +AL LF+E + + + D + +VL AC+ VN
Sbjct: 356 MISGYAQHGNADKALCLFREMI------------DNKIRPDWITFVAVLLACNHAGLVNI 403
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM 249
V + + ++D R G ++ + K+ M
Sbjct: 404 GMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/572 (39%), Positives = 333/572 (58%), Gaps = 35/572 (6%)
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K+ H GF + + L++ G++ AR++FDE+ + I W ++ GYV
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKP--RIFLWNTLFKGYV 85
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
+N E+LLL+K+ V D V+ A S++ H
Sbjct: 86 RNQLPFESLLLYKKM------------RDLGVRPDEFTYPFVVKAISQLGDFSCGFALHA 133
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
V+K GF V L+ Y + G + + +F+ M KD V WN+ +A+ Q G +A
Sbjct: 134 HVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAI 193
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
AL+ F++M V+ ++ T+ ++L A LG L +G+ I+D+ K +++ ++IV + +
Sbjct: 194 ALEYFNKMCADA-VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARL 252
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
DM+ KCG + AR F +MK++NV SW+ MI GY M+ +REAL LF M G+RPNY+
Sbjct: 253 DMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYV 312
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTM--GHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
TF+ VLSACSHAGLV EG + + M ++ N+EP EHY CMVDLLGR+G L+EAY+ I
Sbjct: 313 TFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFI 372
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
+ M V+ D +WG+LLGAC +H+++ LG+ A L E P+ YHVLLSNIYA AG+W+
Sbjct: 373 KKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWD 432
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVG 570
V++ RS M+ K +S VE GK+H F GDK HPQ + IYE L+E+ K++++G
Sbjct: 433 CVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMG 492
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIR 612
YV D SV HDV+ EEKE +L HSEKLA NLR C DCH +
Sbjct: 493 YVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSK 552
Query: 613 LISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+S + EI++RD RFH+F++G+CSC ++W
Sbjct: 553 FVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 165/339 (48%), Gaps = 19/339 (5%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
K +F WN++ R E+L + MR L + P T+P +K+ S L D G
Sbjct: 71 KPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFA 130
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H +GF V++ L+ MY K GELS A LF+ + +++++V+W + L VQ
Sbjct: 131 LHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESM--QVKDLVAWNAFLAVCVQT 188
Query: 155 DNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFV 214
N+ AL F + +D V DS + S+LSAC ++ + E +
Sbjct: 189 GNSAIALEYFNKMC------------ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRA 236
Query: 215 IKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEAL 274
K D + V N +D + + G+ + +R +F+ M +++ V+W+++I YA NG + EAL
Sbjct: 237 RKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREAL 296
Query: 275 DVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK---MDLEESVIVGTSI 331
+F M ++ ++ N VT VL A +H G++ GK +++ +LE +
Sbjct: 297 TLFTTM-QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACM 355
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMH 369
+D+ + G ++ A + +M E + W A++ +H
Sbjct: 356 VDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
NT + + + + NV SW+++I A GDS EAL F++M+ L P TF +
Sbjct: 260 NTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLS 319
Query: 82 SCSALHDLHSGKQAHQ---QAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIP 135
+CS ++ GK+ Q+ + ++D+ + G L +A + ++P
Sbjct: 320 ACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMP 376
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/633 (37%), Positives = 365/633 (57%), Gaps = 35/633 (5%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
+ ++ +V +WNS+I + EAL FS M + I + L +L
Sbjct: 344 RQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
+G + H G+ ++ V + LIDMYSKC + F + ++++SWT+++ G
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF--LRMHDKDLISWTTVIAG 461
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y QND EAL LF++ + E +D + + S+L A S + + +
Sbjct: 462 YAQNDCHVEALELFRDVAKKRME------------IDEMILGSILRASSVLKSMLIVKEI 509
Query: 211 HGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLA 270
H ++++G V + N L+D Y + ++ + +VF+ + KD V+W S+I+ A NG
Sbjct: 510 HCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 568
Query: 271 AEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTS 330
+EA+++F +MV+ T + ++V L +L A A L L G+ IH +++ + +
Sbjct: 569 SEAVELFRRMVE-TGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA 627
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++DMY CG + A+ F++++ K + +T+MI YGMH + A++LF KM V P+
Sbjct: 628 VVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPD 687
Query: 391 YITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLI 450
+I+F+++L ACSHAGL+ EG +L M HE+ +EP EHY C+VD+LGRA + EA++ +
Sbjct: 688 HISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFV 747
Query: 451 EGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWE 510
+ MK + VW +LL ACR H ++GEIAA++L ELEP N G VL+SN++A GRW
Sbjct: 748 KMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWN 807
Query: 511 DVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQ-EV 569
DVE+ R+ MK + K PG S +E+ GKVH F DK HP+ ++IYE L E+ KL+ EV
Sbjct: 808 DVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREV 867
Query: 570 GYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVI 611
GYV D V+H+VD+ EK L HSE++A NLRVC DCHT
Sbjct: 868 GYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFC 927
Query: 612 RLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+L+SK+ R+IV+RD+ RFH+F+ GLCSCGD W
Sbjct: 928 KLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 228/459 (49%), Gaps = 41/459 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F++ D+ F+WN++I G+ AL + +MR + S+FP +K+C+ L
Sbjct: 138 VFDEMPDRT-AFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
D+ SG + H G+H F+ +AL+ MY+K +LS AR+LFD Q + V W S+
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF-QEKGDAVLWNSI 255
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
L+ Y + + E L LF+E + G + N S I S L+AC + +
Sbjct: 256 LSSYSTSGKSLETLELFREMHMT-----GPAPN-------SYTIVSALTACDGFSYAKLG 303
Query: 208 EGAHGFVIKRG-FDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H V+K SE+ V N LI Y R G + + ++ M D VTWNS+I Y Q
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
N + EAL+ F M+ + K + V++++++ A L L G +H VIK + ++
Sbjct: 364 NLMYKEALEFFSDMIAAGH-KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 422
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
VG ++IDMY KC +AF +M +K++ SWT +IAGY + EAL+LF + K
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 387 VRPNYITFVSVLSACS-----------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVD 435
+ + + S+L A S H ++++G L+T+ +VD
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG--LLDTVIQNE-----------LVD 529
Query: 436 LLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKN 474
+ G+ + A + E +K K D V W S++ + ++ N
Sbjct: 530 VYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGN 567
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 174/352 (49%), Gaps = 31/352 (8%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAF--IFGFHRDVFVSSALIDMYSKCGELSDARKLFD 132
F ++ C + G+Q H + F F D F++ L+ MY KCG L DA K+FD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 133 EIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIA 192
E+P R +W +M+ YV N AL L+ +E G +S
Sbjct: 141 EMPD--RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS------------FP 186
Query: 193 SVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEK 252
++L AC+++ H ++K G+ S + N L+ YA+ + +R++FDG EK
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246
Query: 253 -DAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
DAV WNSI++ Y+ +G + E L++F +M T N+ T+ + L A +LGK
Sbjct: 247 GDAVLWNSILSSYSTSGKSLETLELFREM-HMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 312 IHDQVIKMDLEES-VIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHC 370
IH V+K S + V ++I MY +CG++ A + QM +V +W ++I GY +
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 371 RAREALDLFYKMIKAGVRPNYITFVSVLSACS-----------HAGLVQEGW 411
+EAL+ F MI AG + + ++ S+++A HA +++ GW
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 144/314 (45%), Gaps = 20/314 (6%)
Query: 161 LLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD 220
L F L E + SEN+ V A A VL C + H + K
Sbjct: 57 LACFDGVLTEAFQRLDVSENNSPV----EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPS 112
Query: 221 SEVG-VGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
E+ + L+ Y + G +D + KVFD M ++ A WN++I Y NG A AL ++
Sbjct: 113 FELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN 172
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M + V + A+L A A L +R G +H ++K+ + + +++ MY K
Sbjct: 173 M-RVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND 231
Query: 340 QVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVL 398
+ AR+ F+ +EK + W ++++ Y ++ E L+LF +M G PN T VS L
Sbjct: 232 DLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSAL 291
Query: 399 SAC---SHAGLVQE-GWHWLNTMGHEFNIEPGVEHYGC--MVDLLGRAGKLKEAYDLIEG 452
+AC S+A L +E L + H E Y C ++ + R GK+ +A ++
Sbjct: 292 TACDGFSYAKLGKEIHASVLKSSTH------SSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 453 MKVKADFVVWGSLL 466
M AD V W SL+
Sbjct: 346 MN-NADVVTWNSLI 358
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 17/193 (8%)
Query: 22 NTNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIK 81
N T + + +V SW S+I+ A G+ EA+ F M + L+ C +
Sbjct: 536 NMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILS 595
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNI 141
+ ++L L+ G++ H GF + ++ A++DMY+ CG+L A+ +FD I + + +
Sbjct: 596 AAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER--KGL 653
Query: 142 VSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV 201
+ +TSM+ Y + + A+ LF + +NV D ++ ++L ACS
Sbjct: 654 LQYTSMINAYGMHGCGKAAVELFDKM------------RHENVSPDHISFLALLYACSHA 701
Query: 202 TVNGVTEGAHGFV 214
G+ + GF+
Sbjct: 702 ---GLLDEGRGFL 711
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 29/209 (13%)
Query: 276 VFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRL---GKCIHDQVIKM--DLEESVIVGTS 330
V + + DV N + A + G R G+ +H ++ K E + G
Sbjct: 63 VLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAG-K 121
Query: 331 IIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPN 390
++ MY KCG +D A K F++M ++ +W MI Y + AL L++ M GV
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 391 YITFVSVLSACS-----------HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGR 439
+F ++L AC+ H+ LV+ G+H + G N +V + +
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYH---STGFIVN---------ALVSMYAK 229
Query: 440 AGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
L A L +G + K D V+W S+L +
Sbjct: 230 NDDLSAARRLFDGFQEKGDAVLWNSILSS 258
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 250/646 (38%), Positives = 356/646 (55%), Gaps = 59/646 (9%)
Query: 30 NKYVDKNNVF---------SWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRS--TFPC 78
N+ VD N+F SWNS+I+ GD A++ F M P RS ++
Sbjct: 80 NRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM------PERSVVSWTA 133
Query: 79 AIKSCSALHDLHSGKQAHQQAFIFGFH-RDVFVSSALIDMYSKCGELSDARKLFDEIPQR 137
+ C SGK + + +D ++++ Y + G++ DA KLF ++P +
Sbjct: 134 MVNGC-----FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGK 188
Query: 138 IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSA 197
N++SWT+M+ G QN+ + EAL LFK L C S S V++A
Sbjct: 189 --NVISWTTMICGLDQNERSGEALDLFKNML----RCCIKST--------SRPFTCVITA 234
Query: 198 CSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTW 257
C+ + HG +IK GF E V +LI YA + SRKVFD + + W
Sbjct: 235 CANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVW 294
Query: 258 NSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI 317
++++ Y+ N +AL +F M++++ + N T ++ L + + LG L GK +H +
Sbjct: 295 TALLSGYSLNKKHEDALSIFSGMLRNS-ILPNQSTFASGLNSCSALGTLDWGKEMHGVAV 353
Query: 318 KMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALD 377
K+ LE VG S++ MY G V+ A F ++ +K++ SW ++I G H R + A
Sbjct: 354 KLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFV 413
Query: 378 LFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN-IEPGVEHYGCMVDL 436
+F +MI+ P+ ITF +LSACSH G +++G M N I+ ++HY CMVD+
Sbjct: 414 IFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDI 473
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYH 496
LGR GKLKEA +LIE M VK + +VW +LL ACR+H +VD GE AA +F L+ + +
Sbjct: 474 LGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAY 533
Query: 497 VLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIY 556
VLLSNIYA+AGRW +V + R MK + K PG S V +RGK H F GD+ P +IY
Sbjct: 534 VLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIY 591
Query: 557 EYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------------- 599
E LE L KL+E+GY D S +HDV+ E+KE L HSE+LA
Sbjct: 592 EKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVM 651
Query: 600 -NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCHTVI+LIS VV REIV+RD RFH+FK+G CSCGDYW
Sbjct: 652 KNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 189/395 (47%), Gaps = 27/395 (6%)
Query: 108 VFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF 167
V + + +I Y++ L DA LFDE+P +R++VSW SM++G V+ + A+ LF E
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMP--VRDVVSWNSMISGCVECGDMNTAVKLFDE- 122
Query: 168 LLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGN 227
+ E S V+ ++++ C R +G + A + + N
Sbjct: 123 MPERS---------------VVSWTAMVNGCFR---SGKVDQAERLFYQMPV-KDTAAWN 163
Query: 228 TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVK 287
+++ Y + G VD + K+F M K+ ++W ++I QN + EALD+F M++ +K
Sbjct: 164 SMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCC-IK 222
Query: 288 CNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKA 347
+ + V+ A A+ +G +H +IK+ V S+I Y C ++ +RK
Sbjct: 223 STSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKV 282
Query: 348 FNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLV 407
F++ + V WTA+++GY ++ + +AL +F M++ + PN TF S L++CS G +
Sbjct: 283 FDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTL 342
Query: 408 QEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
G ++ + + +E +V + +G + +A + + K V W S++
Sbjct: 343 DWGKE-MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIV 400
Query: 468 ACRIHKNVDLGEIAAKKLFEL--EPNNCGYHVLLS 500
C H + ++ L EP+ + LLS
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
++D AR+ FNQ+ +V +T MI GY R +AL+LF +M VR + +++ S++S
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEM---PVR-DVVSWNSMIS 105
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
C G + + M E V + MV+ R+GK+ +A L M VK D
Sbjct: 106 GCVECGDMNTAVKLFDEMP-----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-DT 159
Query: 460 VVWGSLLGACRIHKNVDLGEI-AAKKLFELEP 490
W S+ +H + G++ A KLF+ P
Sbjct: 160 AAWNSM-----VHGYLQFGKVDDALKLFKQMP 186
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/621 (35%), Positives = 348/621 (56%), Gaps = 59/621 (9%)
Query: 71 PTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKL 130
P ST+ I+ CS L GK+ H+ GF + + + L+ MY+KCG L DARK+
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 131 FDEIPQR-----------------------------IRNIVSWTSMLTGYVQNDNAREAL 161
FDE+P R ++ SWT+M+TGYV+ D EAL
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 162 LLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDS 221
+L+ L++ + N+F +V+IA +A + G + HG +++ G DS
Sbjct: 203 VLYS--LMQR-----VPNSRPNIF--TVSIAVAAAAAVKCIRRG--KEIHGHIVRAGLDS 251
Query: 222 EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMV 281
+ + ++L+D Y + G +D +R +FD ++EKD V+W S+I Y ++ E +F ++V
Sbjct: 252 DEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELV 311
Query: 282 KSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQV 341
S + + N T + VL A A L LGK +H + ++ + +S++DMY KCG +
Sbjct: 312 GSCE-RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI 370
Query: 342 DLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSAC 401
+ A+ + + ++ SWT++I G + + EAL F ++K+G +P+++TFV+VLSAC
Sbjct: 371 ESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Query: 402 SHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVV 461
+HAGLV++G + ++ + + +HY C+VDLL R+G+ ++ +I M +K +
Sbjct: 431 THAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFL 490
Query: 462 WGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKN 521
W S+LG C + N+DL E AA++LF++EP N +V ++NIYA AG+WE+ + R M+
Sbjct: 491 WASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQE 550
Query: 522 RRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHD 581
+ K PG S E++ K H F+ D HP + +I E+L EL K++E GYV + V+HD
Sbjct: 551 IGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHD 610
Query: 582 VDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDREIV 623
V+ E+KE L HSEKLA NLR C DCH I+ IS + R+I
Sbjct: 611 VEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKIT 670
Query: 624 VRDSKRFHYFKDGLCSCGDYW 644
VRDS RFH F++G CSCGDYW
Sbjct: 671 VRDSTRFHCFENGQCSCGDYW 691
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 107/251 (42%), Gaps = 20/251 (7%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F+K V+K+ V SW S+I + E FS + P TF + +C+ L
Sbjct: 275 IFDKIVEKD-VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLT 333
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
GKQ H GF F SS+L+DMY+KCG + A+ + D P+ ++VSWTS+
Sbjct: 334 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK--PDLVSWTSL 391
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRV-TVNGV 206
+ G QN EAL F L ++ D V +VLSAC+ V
Sbjct: 392 IGGCAQNGQPDEALKYFDLLLKSGTK------------PDHVTFVNVLSACTHAGLVEKG 439
Query: 207 TEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDA-VTWNSII---A 262
E + K L+D AR G + + V M K + W S++ +
Sbjct: 440 LEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCS 499
Query: 263 IYAQNGLAAEA 273
Y LA EA
Sbjct: 500 TYGNIDLAEEA 510
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/631 (36%), Positives = 361/631 (57%), Gaps = 36/631 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + ++ +WNS+IA L + S EA+ + M ++ P T K+ S L
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 93 KQAHQQAFIFGFH-RDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
+++H A I G +VFV SAL+DMY K G+ +A+ + D + ++ ++V T+++ GY
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK--DVVLITALIVGY 242
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
Q EA+ F+ L+E+ V + ASVL +C + G + H
Sbjct: 243 SQKGEDTEAVKAFQSMLVEK------------VQPNEYTYASVLISCGNLKDIGNGKLIH 290
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
G ++K GF+S + +L+ Y R VD S +VF + + V+W S+I+ QNG
Sbjct: 291 GLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREE 350
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
AL F +M++ + +K N+ TLS+ L ++L + G+ IH V K + G+ +
Sbjct: 351 MALIEFRKMMRDS-IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGL 409
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
ID+Y KCG D+AR F+ + E +V S MI Y + REALDLF +MI G++PN
Sbjct: 410 IDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPND 469
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+T +SVL AC+++ LV+EG ++ + I +HY CMVDLLGRAG+L+EA +++
Sbjct: 470 VTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLT 527
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
+ D V+W +LL AC++H+ V++ E +K+ E+EP + G +L+SN+YA+ G+W
Sbjct: 528 TEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNR 587
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK-EHPQHEKIYEYLEELNVKLQEVG 570
V +S MK+ +L K P S VE+ + H F+ GD HP E+I E LEEL K +++G
Sbjct: 588 VIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLG 647
Query: 571 YVTDMTSVIHDVDQEEKEMTLRIHSEKLA-----------------NLRVCGDCHTVIRL 613
YV D + V D+++ KE +L HSEKLA NLRVC DCH+ I++
Sbjct: 648 YVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGSIRILKNLRVCVDCHSWIKI 707
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+S+V+ REI+ RDSKRFH+F+DG CSCGDYW
Sbjct: 708 VSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 190/375 (50%), Gaps = 19/375 (5%)
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
+LT T + F ++ C + K GF ++ S L+D KCG++ A
Sbjct: 61 TLTTTHN-FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYA 118
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
R++FD + + R+IV+W S++ +++ ++EA+ +++ + ++NV D
Sbjct: 119 RQVFDGMSE--RHIVTWNSLIAYLIKHRRSKEAVEMYRLMI------------TNNVLPD 164
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFD-SEVGVGNTLIDAYARGGHVDVSRKVF 246
++SV A S +++ + +HG + G + S V VG+ L+D Y + G ++ V
Sbjct: 165 EYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVL 224
Query: 247 DGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVL 306
D + EKD V ++I Y+Q G EA+ F M+ V+ N T ++VL++ +L +
Sbjct: 225 DRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEK-VQPNEYTYASVLISCGNLKDI 283
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
GK IH ++K E ++ TS++ MY +C VD + + F ++ N SWT++I+G
Sbjct: 284 GNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGL 343
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
+ R AL F KM++ ++PN T S L CS+ + +EG ++ + ++ +
Sbjct: 344 VQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEG-RQIHGIVTKYGFDRD 402
Query: 427 VEHYGCMVDLLGRAG 441
++DL G+ G
Sbjct: 403 KYAGSGLIDLYGKCG 417
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 22/236 (9%)
Query: 31 KYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLH 90
K ++ N SW S+I+ L + G AL F M + S+ P T A++ CS L
Sbjct: 326 KCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFE 385
Query: 91 SGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTG 150
G+Q H +GF RD + S LID+Y KCG AR +FD + + +++S +M+
Sbjct: 386 EGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSE--VDVISLNTMIYS 443
Query: 151 YVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGA 210
Y QN REAL LF+ + + + + V + SVL AC+ + V EG
Sbjct: 444 YAQNGFGREALDLFERMI------------NLGLQPNDVTVLSVLLACNNSRL--VEEGC 489
Query: 211 HGFVIKRGFDSEVGVGN----TLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
F R ++ + N ++D R G ++ + + +I D V W ++++
Sbjct: 490 ELFDSFR--KDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLS 543
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 90/180 (50%), Gaps = 11/180 (6%)
Query: 326 IVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKA 385
I G+ ++D KCG +D AR+ F+ M E+++ +W ++IA H R++EA++++ MI
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 386 GVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY-----GCMVDLLGRA 440
V P+ T SV A S L +E H + G+E +VD+ +
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQR-----SHGLAVILGLEVSNVFVGSALVDMYVKF 214
Query: 441 GKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE-LEPNNCGYHVLL 499
GK +EA +++ ++ K ++ ++G + ++ + + L E ++PN Y +L
Sbjct: 215 GKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 274
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/669 (34%), Positives = 357/669 (53%), Gaps = 61/669 (9%)
Query: 23 TNLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM-RKLSLTPTRSTFPCAIK 81
+ + + F K D++ V +WN +I + G A++A+++M R S TR T +K
Sbjct: 89 SEMESTFEKLPDRDGV-TWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 82 SCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLF---------- 131
S+ + GKQ H Q GF + V S L+ MY+ G +SDA+K+F
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 132 --------------DEIPQRIRNI----VSWTSMLTGYVQNDNAREALLLFKEFLLEESE 173
++ Q R + VSW +M+ G QN A+EA+ F+E ++
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ--- 264
Query: 174 CGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAY 233
+ +D SVL AC + + H +I+ F + VG+ LID Y
Sbjct: 265 ---------GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 234 ARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTL 293
+ + ++ VFD M +K+ V+W +++ Y Q G A EA+ +F M +S + + TL
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS-GIDPDHYTL 374
Query: 294 SAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKE 353
+ A A++ L G H + I L V V S++ +Y KCG +D + + FN+M
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 354 KNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHW 413
++ SWTAM++ Y RA E + LF KM++ G++P+ +T V+SACS AGLV++G +
Sbjct: 435 RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY 494
Query: 414 LNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHK 473
M E+ I P + HY CM+DL R+G+L+EA I GM D + W +LL ACR
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Query: 474 NVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLV 533
N+++G+ AA+ L EL+P++ + LLS+IYA+ G+W+ V + R M+ + + K PG S +
Sbjct: 555 NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614
Query: 534 ELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRI 593
+ +GK+H+F D+ P ++IY LEELN K+ + GY D + V HDV++ K L
Sbjct: 615 KWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNY 674
Query: 594 HSEKLA------------------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKD 635
HSE+LA NLRVC DCH + IS V REI+VRD+ RFH FKD
Sbjct: 675 HSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKD 734
Query: 636 GLCSCGDYW 644
G CSCGD+W
Sbjct: 735 GTCSCGDFW 743
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 211/418 (50%), Gaps = 63/418 (15%)
Query: 105 HRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLF 164
+ + F+ + ++ Y+ + AR++FD IPQ N+ SW ++L Y + E F
Sbjct: 38 YPETFLYNNIVHAYALMKSSTYARRVFDRIPQP--NLFSWNNLLLAYSKAGLISEMESTF 95
Query: 165 KEF----------LLEE---SECGGASENSDNV----FVDSVAIASVLSACSRVTVNG-- 205
++ L+E S GA+ + N F ++ ++++ + NG
Sbjct: 96 EKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHV 155
Query: 206 -VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM--------------- 249
+ + HG VIK GF+S + VG+ L+ YA G + ++KVF G+
Sbjct: 156 SLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGL 215
Query: 250 ---------------IEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
+EKD+V+W ++I AQNGLA EA++ F +M K +K +
Sbjct: 216 LACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFG 274
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
+VL A LG + GK IH +I+ + ++ + VG+++IDMYCKC + A+ F++MK+K
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
NV SWTAM+ GYG RA EA+ +F M ++G+ P++ T +SAC++ ++EG +
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF- 393
Query: 415 NTMGHEFNIEPGVEHY----GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
H I G+ HY +V L G+ G + ++ L M V+ D V W +++ A
Sbjct: 394 ----HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSA 446
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 7/181 (3%)
Query: 307 RLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGY 366
R K IH +I+ + +I+ Y AR+ F+++ + N+ SW ++ Y
Sbjct: 23 RYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAY 82
Query: 367 GMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPG 426
E F K+ + +T+ ++ S +GLV NTM +F+
Sbjct: 83 SKAGLISEMESTFEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLT 138
Query: 427 VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA-AKKL 485
M+ L G + I G +K F + L+G+ ++ ++G I+ AKK+
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQ-IHGQVIKLGFESY-LLVGSPLLYMYANVGCISDAKKV 196
Query: 486 F 486
F
Sbjct: 197 F 197
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/623 (36%), Positives = 347/623 (55%), Gaps = 72/623 (11%)
Query: 75 TFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDM---YSKCGELSDARKLF 131
T C ++ CS +L KQ H + G +D + + + + L A+ +F
Sbjct: 17 TMSC-LQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72
Query: 132 DEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAI 191
D + + W M+ G+ +D +LLL++ L C A N+
Sbjct: 73 DGFDRP--DTFLWNLMIRGFSCSDEPERSLLLYQRML-----CSSAPHNA-------YTF 118
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYA----------------- 234
S+L ACS ++ T H + K G++++V N+LI++YA
Sbjct: 119 PSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE 178
Query: 235 --------------RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQM 280
+ G +D++ +F M EK+A++W ++I+ Y Q + EAL +F +M
Sbjct: 179 PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM 238
Query: 281 VKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQ 340
+++DV+ + V+L+ L A A LG L GK IH + K + ++G +IDMY KCG+
Sbjct: 239 -QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 341 VDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSA 400
++ A + F +K+K+V++WTA+I+GY H REA+ F +M K G++PN ITF +VL+A
Sbjct: 298 MEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 401 CSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFV 460
CS+ GLV+EG +M ++N++P +EHYGC+VDLLGRAG L EA I+ M +K + V
Sbjct: 358 CSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV 417
Query: 461 VWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTRSLMK 520
+WG+LL ACRIHKN++LGE + L ++P + G +V +NI+A +W+ TR LMK
Sbjct: 418 IWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMK 477
Query: 521 NRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMTSVIH 580
+ +AK PG S + L G H FL GD+ HP+ EKI + KL+E GYV ++ ++
Sbjct: 478 EQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLL 537
Query: 581 D-VDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRLISKVVDRE 621
D VD +E+E + HSEKLA NLRVC DCH V +LISK+ R+
Sbjct: 538 DLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRD 597
Query: 622 IVVRDSKRFHYFKDGLCSCGDYW 644
IV+RD RFH+F+DG CSCGDYW
Sbjct: 598 IVMRDRTRFHHFRDGKCSCGDYW 620
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 178/376 (47%), Gaps = 48/376 (12%)
Query: 34 DKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGK 93
D+ + F WN +I + + +L + M S TFP +K+CS L
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 94 QAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQR---------------- 137
Q H Q G+ DV+ ++LI+ Y+ G A LFD IP+
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 138 -------------IRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNV 184
+N +SWT+M++GYVQ D +EAL LF E +NSD V
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM-----------QNSD-V 243
Query: 185 FVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRK 244
D+V++A+ LSAC+++ + H ++ K + +G LID YA+ G ++ + +
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 245 VFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLG 304
VF + +K W ++I+ YA +G EA+ F +M K +K N +T +AVL A ++ G
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQK-MGIKPNVITFTAVLTACSYTG 362
Query: 305 VLRLGKCIHDQVIK-MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAM 362
++ GK I + + +L+ ++ I+D+ + G +D A++ +M K N W A+
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422
Query: 363 IAGYGMHCRAREALDL 378
+ CR + ++L
Sbjct: 423 LKA----CRIHKNIEL 434
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 27 TLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSAL 86
TLF K +KN + SW ++I+ + + EAL+ F M+ + P + A+ +C+ L
Sbjct: 202 TLFRKMAEKNAI-SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 260
Query: 87 HDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTS 146
L GK H D + LIDMY+KCGE+ +A ++F I + +++ +WT+
Sbjct: 261 GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK--KSVQAWTA 318
Query: 147 MLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGV 206
+++GY + + REA+ F E + + + +VL+ACS + V
Sbjct: 319 LISGYAYHGHGREAISKFMEM------------QKMGIKPNVITFTAVLTACSYTGL--V 364
Query: 207 TEGAHGFV-IKRGFDSEVGVGN--TLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSII 261
EG F ++R ++ + + + ++D R G +D +++ M ++ +AV W +++
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/631 (36%), Positives = 353/631 (55%), Gaps = 50/631 (7%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + NV SW +++ + G EA F M P R+ + + D
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRM------PERNEVSWTVMFGGLIDDGRID 158
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
K ++ + +DV S+ +I + G + +AR +FDE+ R RN+V+WT+M+TGY
Sbjct: 159 KA--RKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEM--RERNVVTWTTMITGYR 214
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
QN+ A LF E + E++E V+ S+L T++G E A
Sbjct: 215 QNNRVDVARKLF-EVMPEKTE---------------VSWTSMLLG---YTLSGRIEDAEE 255
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
F + N +I + G + +R+VFD M ++D TW +I Y + G E
Sbjct: 256 FFEVMPMKPVIAC-NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELE 314
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSII 332
ALD+F QM K V+ + +L ++L A L L+ G+ +H +++ ++ V V + ++
Sbjct: 315 ALDLFAQMQKQ-GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLM 373
Query: 333 DMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYI 392
MY KCG++ A+ F++ K++ W ++I+GY H EAL +F++M +G PN +
Sbjct: 374 TMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKV 433
Query: 393 TFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEG 452
T +++L+ACS+AG ++EG +M +F + P VEHY C VD+LGRAG++ +A +LIE
Sbjct: 434 TLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIES 493
Query: 453 MKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDV 512
M +K D VWG+LLGAC+ H +DL E+AAKKLFE EP+N G +VLLS+I A+ +W DV
Sbjct: 494 MTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDV 553
Query: 513 ERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGD-KEHPQHEKIYEYLEELNVKLQEVGY 571
R M+ ++K PG S +E+ KVH F G K HP+ I LE+ + L+E GY
Sbjct: 554 AVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGY 613
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
D + V+HDVD+EEK +L HSE+LA NLRVCGDCH I+L
Sbjct: 614 SPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKL 673
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
ISKV +REI++RD+ RFH+F +G CSC DYW
Sbjct: 674 ISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 193/417 (46%), Gaps = 35/417 (8%)
Query: 112 SALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEE 171
++++ Y G +AR+LFDE+ +R N+VSW +++GY++N EA +F E + E
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSER--NVVSWNGLVSGYIKNRMIVEARNVF-ELMPER 108
Query: 172 SECGGASENSDNVFVDSVAIASVL--------SACSRVTVNGVTEGAHGFVIKRGFD--- 220
+ + + V A L V G+ + ++ +D
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMP 168
Query: 221 -SEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQ 279
+V +I R G VD +R +FD M E++ VTW ++I Y QN A +F+
Sbjct: 169 VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEV 228
Query: 280 MVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCG 339
M + T+ V+ +++LL G + + +V+ M + VI ++I + + G
Sbjct: 229 MPEKTE-----VSWTSMLLGYTLSGRIEDAEEFF-EVMPM---KPVIACNAMIVGFGEVG 279
Query: 340 QVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLS 399
++ AR+ F+ M++++ +W MI Y EALDLF +M K GVRP++ + +S+LS
Sbjct: 280 EISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILS 339
Query: 400 ACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADF 459
C+ +Q G ++ + V ++ + + G+L +A + + K D
Sbjct: 340 VCATLASLQYG-RQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK-DI 397
Query: 460 VVWGSLLGACRIHKNVDLGEIAAKKLFELE-----PNNCGYHVLLSNIYANAGRWED 511
++W S++ H LGE A K E+ PN +L+ + AG+ E+
Sbjct: 398 IMWNSIISGYASH---GLGEEALKIFHEMPSSGTMPNKVTLIAILTAC-SYAGKLEE 450
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 155/356 (43%), Gaps = 76/356 (21%)
Query: 115 IDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESEC 174
I S+ G++++ARK FD + + + I SW S+++GY N +EA LF E
Sbjct: 24 ISRLSRIGKINEARKFFDSL--QFKAIGSWNSIVSGYFSNGLPKEARQLFDE-------- 73
Query: 175 GGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYA 234
+S + V+ NG L+ Y
Sbjct: 74 --------------------MSERNVVSWNG-----------------------LVSGYI 90
Query: 235 RGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLS 294
+ + +R VF+ M E++ V+W +++ Y Q G+ EA +F +M + N V+ +
Sbjct: 91 KNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER-----NEVSWT 145
Query: 295 AVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK 354
+ + G + + ++D + D V+ T++I C+ G+VD AR F++M+E+
Sbjct: 146 VMFGGLIDDGRIDKARKLYDMMPVKD----VVASTNMIGGLCREGRVDEARLIFDEMRER 201
Query: 355 NVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWL 414
NV +WT MI GY R +D+ K+ + +++ S+L + +G +++ +
Sbjct: 202 NVVTWTTMITGY----RQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 415 NTMGHEFNIEPGVEHYGCMVDL--LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGA 468
M ++P + +V +G K + +DL+E D W ++ A
Sbjct: 258 EVM----PMKPVIACNAMIVGFGEVGEISKARRVFDLME----DRDNATWRGMIKA 305
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 135/312 (43%), Gaps = 62/312 (19%)
Query: 213 FVIKRGFDSEVGVGNTL-IDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+++R + + GV + I +R G ++ +RK FD + K +WNSI++ Y NGL
Sbjct: 6 LILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPK 65
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EA +FD+M E +V+ +
Sbjct: 66 EARQLFDEMS----------------------------------------ERNVVSWNGL 85
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+ Y K + AR F M E+NV SWTAM+ GY EA LF++M + N
Sbjct: 86 VSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NE 141
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEP--GVEHYGCMVDLLGRAGKLKEAYDL 449
+++ + GL+ +G ++ +++ P V M+ L R G++ EA +
Sbjct: 142 VSWTVMF-----GGLIDDG--RIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLI 194
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP--NNCGYHVLLSNIYANAG 507
+ M+ + + V W +++ R + VD+ A+KLFE+ P + +L Y +G
Sbjct: 195 FDEMRER-NVVTWTTMITGYRQNNRVDV----ARKLFEVMPEKTEVSWTSMLLG-YTLSG 248
Query: 508 RWEDVERTRSLM 519
R ED E +M
Sbjct: 249 RIEDAEEFFEVM 260
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/627 (35%), Positives = 345/627 (55%), Gaps = 34/627 (5%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
++ W +++ G ++L+ S MR P TF A+K+ L K H
Sbjct: 211 DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVH 270
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
Q + D V L+ +Y++ G++SDA K+F+E+P+ ++V W+ M+ + QN
Sbjct: 271 GQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN--DVVPWSFMIARFCQNGF 328
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIK 216
EA+ LF + E+ V + ++S+L+ C+ +G+ E HG V+K
Sbjct: 329 CNEAVDLF--IRMREAF----------VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 217 RGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDV 276
GFD ++ V N LID YA+ +D + K+F + K+ V+WN++I Y G +A +
Sbjct: 377 VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSM 436
Query: 277 FDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYC 336
F + +++ V VT S+ L A A L + LG +H IK + + V V S+IDMY
Sbjct: 437 FREALRN-QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYA 495
Query: 337 KCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVS 396
KCG + A+ FN+M+ +V SW A+I+GY H R+AL + M +PN +TF+
Sbjct: 496 KCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLG 555
Query: 397 VLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVK 456
VLS CS+AGL+ +G +M + IEP +EHY CMV LLGR+G+L +A LIEG+ +
Sbjct: 556 VLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYE 615
Query: 457 ADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWEDVERTR 516
++W ++L A N + +A+++ ++ P + +VL+SN+YA A +W +V R
Sbjct: 616 PSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIR 675
Query: 517 SLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGYVTDMT 576
MK + K PG S +E +G VH F VG +HP + I LE LN+K GYV D
Sbjct: 676 KSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRN 735
Query: 577 SVIHDVDQEEKEMTLRIHSEKLA-------------------NLRVCGDCHTVIRLISKV 617
+V+ D+D EEK+ L +HSE+LA NLR+C DCH+ +++IS +
Sbjct: 736 AVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSI 795
Query: 618 VDREIVVRDSKRFHYFKDGLCSCGDYW 644
V R++V+RD RFH+F G+CSCGD+W
Sbjct: 796 VQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 172/345 (49%), Gaps = 28/345 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFP-----CAIKS 82
+FN+ + KN+V W+ +IA + G EA+ F MR+ + P T CAI
Sbjct: 304 VFNE-MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 83 CSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIV 142
CS L G+Q H GF D++VS+ALID+Y+KC ++ A KLF E+ +N V
Sbjct: 363 CSGL-----GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSS--KNEV 415
Query: 143 SWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVT 202
SW +++ GY +A +F+E L + V V V +S L AC+ +
Sbjct: 416 SWNTVIVGYENLGEGGKAFSMFREAL------------RNQVSVTEVTFSSALGACASLA 463
Query: 203 VNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
+ HG IK +V V N+LID YA+ G + ++ VF+ M D +WN++I+
Sbjct: 464 SMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALIS 523
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGK-CIHDQVIKMDL 321
Y+ +GL +AL + D M K D K N +T VL ++ G++ G+ C + +
Sbjct: 524 GYSTHGLGRQALRILDIM-KDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGI 582
Query: 322 EESVIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAG 365
E + T ++ + + GQ+D A K + E +V W AM++
Sbjct: 583 EPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 181/390 (46%), Gaps = 27/390 (6%)
Query: 80 IKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIR 139
++ C +D S K H G D+F ++ L++ Y K G DA LFDE+P+R
Sbjct: 56 LRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER-- 113
Query: 140 NIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACS 199
N VS+ ++ GY D L +E E + +VF + + L
Sbjct: 114 NNVSFVTLAQGYACQDPIGLYSRLHRE----------GHELNPHVFTSFLKLFVSLDKAE 163
Query: 200 RVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNS 259
+ H ++K G+DS VG LI+AY+ G VD +R VF+G++ KD V W
Sbjct: 164 ------ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAG 217
Query: 260 IIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM 319
I++ Y +NG ++L + M + N T L A LG K +H Q++K
Sbjct: 218 IVSCYVENGYFEDSLKLLSCM-RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 320 DLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLF 379
VG ++ +Y + G + A K FN+M + +V W+ MIA + + EA+DLF
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 380 YKMIKAGVRPNYITFVSVLSACS---HAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDL 436
+M +A V PN T S+L+ C+ +GL ++ + +G + +I ++D+
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS----NALIDV 392
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLL 466
+ K+ A L + K + V W +++
Sbjct: 393 YAKCEKMDTAVKLFAELSSKNE-VSWNTVI 421
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 135/293 (46%), Gaps = 13/293 (4%)
Query: 179 ENSDNVF--VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARG 236
E+SD++ +DS A ++L C + + H ++K+G ++ N L++AY +
Sbjct: 38 ESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKA 97
Query: 237 GHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAV 296
G + +FD M E++ V++ ++ YA + + ++ ++ + + N ++
Sbjct: 98 GFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGH-ELNPHVFTSF 152
Query: 297 LLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNV 356
L L + +H ++K+ + + VG ++I+ Y CG VD AR F + K++
Sbjct: 153 LKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDI 212
Query: 357 RSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQ--EGWHWL 414
W +++ Y + ++L L M AG PN TF + L A G +G H
Sbjct: 213 VVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHG- 271
Query: 415 NTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
+ + ++P V G ++ L + G + +A+ + M K D V W ++
Sbjct: 272 QILKTCYVLDPRV-GVG-LLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIA 321
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/634 (35%), Positives = 356/634 (56%), Gaps = 42/634 (6%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+ + ++ SWNS+I+ GD +L F M K P R + A+ +CS ++ G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 93 KQAHQQAFIFGFHR-DVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K+ H A DV V ++++DMYSK GE+S A ++F+ + QR NIV+W M+ Y
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR--NIVAWNVMIGCY 308
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEG-- 209
+N +A L F++ SE G + V+++ + + + + EG
Sbjct: 309 ARNGRVTDAFLCFQKM----SEQNGLQPD-------------VITSINLLPASAILEGRT 351
Query: 210 AHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGL 269
HG+ ++RGF + + LID Y G + + +FD M EK+ ++WNSIIA Y QNG
Sbjct: 352 IHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGK 411
Query: 270 AAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGT 329
AL++F ++ S+ V ++ T++++L A A L G+ IH ++K + I+
Sbjct: 412 NYSALELFQELWDSSLVP-DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILN 470
Query: 330 SIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRP 389
S++ MY CG ++ ARK FN + K+V SW ++I Y +H R ++ LF +MI + V P
Sbjct: 471 SLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNP 530
Query: 390 NYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDL 449
N TF S+L+ACS +G+V EGW + +M E+ I+PG+EHYGCM+DL+GR G A
Sbjct: 531 NKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRF 590
Query: 450 IEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRW 509
+E M +WGSLL A R HK++ + E AA+++F++E +N G +VLL N+YA AGRW
Sbjct: 591 LEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRW 650
Query: 510 EDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKL-QE 568
EDV R + LM+++ +++T S VE +GK H F GD+ H KIYE L+ ++ + +E
Sbjct: 651 EDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEE 710
Query: 569 VGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTV 610
YV ++ + + + + + R HS +LA N R+C CH
Sbjct: 711 DIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEF 770
Query: 611 IRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
+ S++ REIVV DSK FH+F +G CSCG+YW
Sbjct: 771 LEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 209 bits (531), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 245/489 (50%), Gaps = 50/489 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF++ ++K + F WN +I G +EA++ +S M + T+P IKS + +
Sbjct: 86 LFDE-MNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGIS 144
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GK+ H GF DV+V ++LI +Y K G DA K+F+E+P+ R+IVSW SM
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE--RDIVSWNSM 202
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++GY+ + +L+LFKE L +CG D + S L ACS V +
Sbjct: 203 ISGYLALGDGFSSLMLFKEML----KCGFKP--------DRFSTMSALGACSHVYSPKMG 250
Query: 208 EGAHGFVIKRGFDS-EVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQ 266
+ H ++ ++ +V V +++D Y++ G V + ++F+GMI+++ V WN +I YA+
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 267 NGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVI 326
NG +A F +M + ++ + +T +L A A L G+ IH ++ ++
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMV 366
Query: 327 VGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAG 386
+ T++IDMY +CGQ+ A F++M EKNV SW ++IA Y + + AL+LF ++ +
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSS 426
Query: 387 VRPNYITFVSVLSACSHAGLVQEG----------WHWLNTMGHEFNIEPGVEHYGCMVDL 436
+ P+ T S+L A + + + EG +W NT+ +V +
Sbjct: 427 LVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI-----------ILNSLVHM 475
Query: 437 LGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFEL-----EPN 491
G L++A + +K D V W S++ A +H G I+ E+ PN
Sbjct: 476 YAMCGDLEDARKCFNHILLK-DVVSWNSIIMAYAVH---GFGRISVWLFSEMIASRVNPN 531
Query: 492 NCGYHVLLS 500
+ LL+
Sbjct: 532 KSTFASLLA 540
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 18/232 (7%)
Query: 244 KVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHL 303
++FD M + DA WN +I + GL EA+ + +MV + VK + T V+ ++A +
Sbjct: 85 QLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA-GVKADTFTYPFVIKSVAGI 143
Query: 304 GVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMI 363
L GK IH VIK+ V V S+I +Y K G A K F +M E+++ SW +MI
Sbjct: 144 SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMI 203
Query: 364 AGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFN- 422
+GY +L LF +M+K G +P+ + +S L ACSH + MG E +
Sbjct: 204 SGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV--------YSPKMGKEIHC 255
Query: 423 ------IEPG-VEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLG 467
IE G V ++D+ + G++ A + GM ++ + V W ++G
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIG 306
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/571 (38%), Positives = 327/571 (57%), Gaps = 33/571 (5%)
Query: 92 GKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGY 151
K H + DV + + LI+ YSKCG + AR++FD + +R ++VSW +M+ Y
Sbjct: 80 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER--SLVSWNTMIGLY 137
Query: 152 VQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
+N EAL +F E ++ I+SVLSAC + H
Sbjct: 138 TRNRMESEALDIFLEM------------RNEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+K D + VG L+D YA+ G + + +VF+ M +K +VTW+S++A Y QN
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEESVIVGTSI 331
EAL ++ + + ++ N TLS+V+ A ++L L GK +H + K +V V +S
Sbjct: 246 EALLLYRR-AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304
Query: 332 IDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMIKAGVRPNY 391
+DMY KCG + + F++++EKN+ W +I+G+ H R +E + LF KM + G+ PN
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364
Query: 392 ITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKLKEAYDLIE 451
+TF S+LS C H GLV+EG + M + + P V HY CMVD+LGRAG L EAY+LI+
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424
Query: 452 GMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIYANAGRWED 511
+ +WGSLL +CR++KN++L E+AA+KLFELEP N G HVLLSNIYA +WE+
Sbjct: 425 SIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEE 484
Query: 512 VERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELNVKLQEVGY 571
+ ++R L+++ + K G S ++++ KVH F VG+ HP+ +I L+ L +K ++ GY
Sbjct: 485 IAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGY 544
Query: 572 VTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCGDCHTVIRL 613
+ +HDV+ +KE L HSEKLA NLR+C DCH ++
Sbjct: 545 KPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKA 604
Query: 614 ISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
S R I+VRD RFH+F DG CSCGD+W
Sbjct: 605 ASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 183/341 (53%), Gaps = 8/341 (2%)
Query: 183 NVFVDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVS 242
N F + + +L C+R + HG +I+ + +V + N LI+AY++ G V+++
Sbjct: 56 NEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELA 115
Query: 243 RKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIA- 301
R+VFDGM+E+ V+WN++I +Y +N + +EALD+F +M ++ K + T+S+VL A
Sbjct: 116 RQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEM-RNEGFKFSEFTISSVLSACGV 174
Query: 302 HLGVLRLGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTA 361
+ L K +H +K ++ ++ VGT+++D+Y KCG + A + F M++K+ +W++
Sbjct: 175 NCDALECKK-LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSS 233
Query: 362 MIAGYGMHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEF 421
M+AGY + EAL L+ + + + N T SV+ ACS+ + EG ++ + +
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ-MHAVICKS 292
Query: 422 NIEPGVEHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIA 481
V VD+ + G L+E+Y + ++ K + +W +++ H I
Sbjct: 293 GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK-NLELWNTIISGFAKHARPKEVMIL 351
Query: 482 AKKLFE--LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMK 520
+K+ + + PN + LLS + + G E+ R LM+
Sbjct: 352 FEKMQQDGMHPNEVTFSSLLS-VCGHTGLVEEGRRFFKLMR 391
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 172/352 (48%), Gaps = 33/352 (9%)
Query: 35 KNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQ 94
+ ++ SWN++I R EAL F MR + T + +C D K+
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183
Query: 95 AHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQN 154
H + +++V +AL+D+Y+KCG + DA ++F+ + ++ V+W+SM+ GYVQN
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD--KSSVTWSSMVAGYVQN 241
Query: 155 DNAREALLLFK---EFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAH 211
N EALLL++ LE+++ ++SV+ ACS + + H
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQ---------------FTLSSVICACSNLAALIEGKQMH 286
Query: 212 GFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAA 271
+ K GF S V V ++ +D YA+ G + S +F + EK+ WN+II+ +A++
Sbjct: 287 AVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPK 346
Query: 272 EALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQV-IKMDLEESVIVGTS 330
E + +F++M + + N VT S++L H G++ G+ + L +V+ +
Sbjct: 347 EVMILFEKM-QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSC 405
Query: 331 IIDMYCKCGQVDLARKAFNQMK----EKNVRSWTAMIAGYGMHCRAREALDL 378
++D+ G+ L +A+ +K + W +++A CR + L+L
Sbjct: 406 MVDIL---GRAGLLSEAYELIKSIPFDPTASIWGSLLAS----CRVYKNLEL 450
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
+F DK++V +W+S++A + + EAL + +++SL + T I +CS L
Sbjct: 219 VFESMQDKSSV-TWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLA 277
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L GKQ H GF +VFV+S+ +DMY+KCG L ++ +F E+ + +N+ W ++
Sbjct: 278 ALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE--KNLELWNTI 335
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
++G+ ++ +E ++LF++ D + + V +S+LS C + V
Sbjct: 336 ISGFAKHARPKEVMILFEKM------------QQDGMHPNEVTFSSLLSVCGHTGL--VE 381
Query: 208 EGAHGFVIKR---GFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIA 262
EG F + R G V + ++D R G + + ++ + + A W S++A
Sbjct: 382 EGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/519 (39%), Positives = 320/519 (61%), Gaps = 30/519 (5%)
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
+ +M+ GYV + EAL + E + +E D+ +L AC+R+
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNE------------PDNFTYPCLLKACTRLKS 147
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
+ HG V K G +++V V N+LI+ Y R G +++S VF+ + K A +W+S+++
Sbjct: 148 IREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA 207
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLEE 323
A G+ +E L +F M T++K + + LLA A+ G L LG IH +++ E
Sbjct: 208 RAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL 267
Query: 324 SVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDLFYKMI 383
++IV TS++DMY KCG +D A F +M+++N +++AMI+G +H AL +F KMI
Sbjct: 268 NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI 327
Query: 384 KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLGRAGKL 443
K G+ P+++ +VSVL+ACSH+GLV+EG M E +EP EHYGC+VDLLGRAG L
Sbjct: 328 KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 387
Query: 444 KEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVLLSNIY 503
+EA + I+ + ++ + V+W + L CR+ +N++LG+IAA++L +L +N G ++L+SN+Y
Sbjct: 388 EEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLY 447
Query: 504 ANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEYLEELN 563
+ W+DV RTR+ + + L +TPGFS+VEL+GK H F+ D+ HP+ ++IY+ L ++
Sbjct: 448 SQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQME 507
Query: 564 VKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------NLRVCG 605
+L+ GY D+T ++ +VD+EEK+ L+ HS+K+A NLR+C
Sbjct: 508 WQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCS 567
Query: 606 DCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
DCHT + IS + +REIVVRD RFH FK G CSC DYW
Sbjct: 568 DCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 175/348 (50%), Gaps = 20/348 (5%)
Query: 33 VDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSG 92
+D F +N++I EAL ++ M + P T+PC +K+C+ L + G
Sbjct: 92 IDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREG 151
Query: 93 KQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYV 152
KQ H Q F G DVFV ++LI+MY +CGE+ + +F+++ + SW+SM++
Sbjct: 152 KQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLES--KTAASWSSMVSARA 209
Query: 153 QNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHG 212
E LLLF+ G SE N+ + + S L AC+ + HG
Sbjct: 210 GMGMWSECLLLFR---------GMCSET--NLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 213 FVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAE 272
F+++ + + V +L+D Y + G +D + +F M +++ +T++++I+ A +G
Sbjct: 259 FLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGES 318
Query: 273 ALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKM-DLEESVIVGTSI 331
AL +F +M+K ++ + V +VL A +H G+++ G+ + +++K +E + +
Sbjct: 319 ALRMFSKMIKE-GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCL 377
Query: 332 IDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIAGYGMHCRAREALDL 378
+D+ + G ++ A + + EKN W ++ CR R+ ++L
Sbjct: 378 VDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS----QCRVRQNIEL 421
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/644 (36%), Positives = 358/644 (55%), Gaps = 99/644 (15%)
Query: 76 FPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALI------DMYSKCGELSDARK 129
FP I +C + DL Q H G RD ++ ++ D++ + +L A K
Sbjct: 27 FP-QINNCRTIRDL---SQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHK 80
Query: 130 LFDEIPQRIRNIVSWTSMLTGYVQNDNARE--ALLLFKEFLLEESECGGASENSDNVFVD 187
+F+++PQR N SW +++ G+ ++D + A+ LF E + +E V +
Sbjct: 81 IFNQMPQR--NCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEF-----------VEPN 127
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGF---------------------------- 219
SVL AC++ + HG +K GF
Sbjct: 128 RFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFY 187
Query: 220 -----------------DSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIA 262
D E+ + N +ID Y R G +R +FD M ++ V+WN++I+
Sbjct: 188 KNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMIS 247
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIH----DQVIK 318
Y+ NG +A++VF +M K D++ N VTL +VL AI+ LG L LG+ +H D I+
Sbjct: 248 GYSLNGFFKDAVEVFREM-KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIR 306
Query: 319 MDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCRAREALDL 378
+D ++G+++IDMY KCG ++ A F ++ +NV +W+AMI G+ +H +A +A+D
Sbjct: 307 ID----DVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDC 362
Query: 379 FYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHYGCMVDLLG 438
F KM +AGVRP+ + ++++L+ACSH GLV+EG + + M +EP +EHYGCMVDLLG
Sbjct: 363 FCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLG 422
Query: 439 RAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEPNNCGYHVL 498
R+G L EA + I M +K D V+W +LLGACR+ NV++G+ A L ++ P++ G +V
Sbjct: 423 RSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVA 482
Query: 499 LSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHPQHEKIYEY 558
LSN+YA+ G W +V R MK + + K PG SL+++ G +H F+V D HP+ ++I
Sbjct: 483 LSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSM 542
Query: 559 LEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------------------N 600
L E++ KL+ GY T V+ ++++E+KE L HSEK+A N
Sbjct: 543 LVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKN 602
Query: 601 LRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
LR+C DCH+ I+LISKV R+I VRD KRFH+F+DG CSC DYW
Sbjct: 603 LRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 40/379 (10%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRA----FSSMRKLSLTPTRSTFPCAIKSC 83
+FN+ + + N FSWN++I + D +AL A + M + P R TFP +K+C
Sbjct: 81 IFNQ-MPQRNCFSWNTIIRGFSE-SDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKAC 138
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLF------------ 131
+ + GKQ H A +GF D FV S L+ MY CG + DAR LF
Sbjct: 139 AKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVM 198
Query: 132 DEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEF----------LLEESECGGASENS 181
+ +R IV W M+ GY++ + + A +LF + ++ G +++
Sbjct: 199 TDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDA 258
Query: 182 DNVF---------VDSVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDA 232
VF + V + SVL A SR+ + E H + G + +G+ LID
Sbjct: 259 VEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDM 318
Query: 233 YARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVT 292
Y++ G ++ + VF+ + ++ +TW+++I +A +G A +A+D F +M + V+ + V
Sbjct: 319 YSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM-RQAGVRPSDVA 377
Query: 293 LSAVLLAIAHLGVLRLGKCIHDQVIKMD-LEESVIVGTSIIDMYCKCGQVDLARKAFNQM 351
+L A +H G++ G+ Q++ +D LE + ++D+ + G +D A + M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 352 KEK-NVRSWTAMIAGYGMH 369
K + W A++ M
Sbjct: 438 PIKPDDVIWKALLGACRMQ 456
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 146/335 (43%), Gaps = 60/335 (17%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALH 87
LF+K + + +V SWN++I+ + G +A+ F M+K + P T + + S L
Sbjct: 230 LFDK-MRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLG 288
Query: 88 DLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSM 147
L G+ H A G D + SALIDMYSKCG + A +F+ +P+ N+++W++M
Sbjct: 289 SLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR--ENVITWSAM 346
Query: 148 LTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVT 207
+ G+ + A +A+ F + V VA ++L+ACS
Sbjct: 347 INGFAIHGQAGDAIDCFCKM------------RQAGVRPSDVAYINLLTACS-------- 386
Query: 208 EGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVT-----WNSIIA 262
GG V+ R+ F M+ D + + ++
Sbjct: 387 ---------------------------HGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVD 419
Query: 263 IYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIKMDLE 322
+ ++GL EA ++ + + +K + V A+L A G + +GK + + ++ M
Sbjct: 420 LLGRSGLLDEA----EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPH 475
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVR 357
+S ++ +MY G + +MKEK++R
Sbjct: 476 DSGAY-VALSNMYASQGNWSEVSEMRLRMKEKDIR 509
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/596 (37%), Positives = 342/596 (57%), Gaps = 35/596 (5%)
Query: 68 SLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDA 127
SL S+ A+KSC ++ + H + +R F+ L+ Y + G A
Sbjct: 29 SLDANVSSLIAAVKSCVSIELC---RLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCA 85
Query: 128 RKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVD 187
KLFDE+P+R ++VSW S+++GY + + ++ E G N
Sbjct: 86 EKLFDEMPER--DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEV---GFRPNE------ 134
Query: 188 SVAIASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFD 247
V S++SAC HG V+K G EV V N I+ Y + G + S K+F+
Sbjct: 135 -VTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFE 193
Query: 248 GMIEKDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLR 307
+ K+ V+WN++I I+ QNGLA + L F+ M + + + T AVL + +GV+R
Sbjct: 194 DLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN-MSRRVGHEPDQATFLAVLRSCEDMGVVR 252
Query: 308 LGKCIHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYG 367
L + IH ++ + + T+++D+Y K G+++ + F+++ + +WTAM+A Y
Sbjct: 253 LAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYA 312
Query: 368 MHCRAREALDLFYKMIKAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGV 427
H R+A+ F M+ G+ P+++TF +L+ACSH+GLV+EG H+ TM + I+P +
Sbjct: 313 THGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRL 372
Query: 428 EHYGCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFE 487
+HY CMVDLLGR+G L++AY LI+ M ++ VWG+LLGACR++K+ LG AA++LFE
Sbjct: 373 DHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFE 432
Query: 488 LEPNNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDK 547
LEP + +V+LSNIY+ +G W+D R R+LMK + L + G S +E K+H F+VGD
Sbjct: 433 LEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDW 492
Query: 548 EHPQHEKIYEYLEELNVKLQ-EVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA------- 599
HP+ EKI + L+E+ K++ E+GY + V+HDV ++ KE + HSEK+A
Sbjct: 493 SHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLV 552
Query: 600 -----------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLR+CGDCH + IS + R I++RDSKRFH+F DG CSC DYW
Sbjct: 553 VSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 160/341 (46%), Gaps = 20/341 (5%)
Query: 28 LFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSM--RKLSLTPTRSTFPCAIKSCSA 85
LF++ +++ V SWNS+I+ + G + S M ++ P TF I +C
Sbjct: 88 LFDEMPERDLV-SWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVY 146
Query: 86 LHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWT 145
G+ H FG +V V +A I+ Y K G+L+ + KLF+++ I+N+VSW
Sbjct: 147 GGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLS--IKNLVSWN 204
Query: 146 SMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNG 205
+M+ ++QN A + L F E D +VL +C + V
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHE------------PDQATFLAVLRSCEDMGVVR 252
Query: 206 VTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAIYA 265
+ +G HG ++ GF + L+D Y++ G ++ S VF + D++ W +++A YA
Sbjct: 253 LAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYA 312
Query: 266 QNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVIK-MDLEES 324
+G +A+ F+ MV + + VT + +L A +H G++ GK + + K ++
Sbjct: 313 THGFGRDAIKHFELMVH-YGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPR 371
Query: 325 VIVGTSIIDMYCKCGQVDLARKAFNQMK-EKNVRSWTAMIA 364
+ + ++D+ + G + A +M E + W A++
Sbjct: 372 LDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 412
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 129/284 (45%), Gaps = 25/284 (8%)
Query: 1 MKLSKSSSVSSVVSNVDKHSTNTNLTTLFNKYVDKN--NVFSWNSVIADLARGGDSVEAL 58
MK V V + ++ + +LT+ + D + N+ SWN++I + G + + L
Sbjct: 161 MKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGL 220
Query: 59 RAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMY 118
F+ R++ P ++TF ++SC + + + H GF + +++AL+D+Y
Sbjct: 221 AYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLY 280
Query: 119 SKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGAS 178
SK G L D+ +F EI + ++WT+ML Y + R+A+ F E ++
Sbjct: 281 SKLGRLEDSSTVFHEITS--PDSMAWTAMLAAYATHGFGRDAIKHF-ELMVHY------- 330
Query: 179 ENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF--VIKR-GFDSEVGVGNTLIDAYAR 235
+ D V +L+ACS + V EG H F + KR D + + ++D R
Sbjct: 331 ----GISPDHVTFTHLLNACSHSGL--VEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR 384
Query: 236 GGHVDVSRKVFDGM-IEKDAVTWNSIIA---IYAQNGLAAEALD 275
G + + + M +E + W +++ +Y L +A +
Sbjct: 385 SGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAE 428
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/652 (34%), Positives = 352/652 (53%), Gaps = 69/652 (10%)
Query: 43 SVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAHQQAFIF 102
+ IA L G+ EA + F +L++ S F I+SC+ L SGKQ H +
Sbjct: 18 TAIATLCSKGNLREAFQRF----RLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVS 73
Query: 103 GFHRDVFVSSALIDMYSK-------------------------------CGELSDARKLF 131
GF D F+ + L+ MYSK G+L +ARK+F
Sbjct: 74 GFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVF 133
Query: 132 DEIPQRIRNIVSWTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAI 191
DE+P R + +W +M+ G +Q + E L LF+E + D +
Sbjct: 134 DEMPDR--KLTTWNAMIAGLIQFEFNEEGLSLFREM------------HGLGFSPDEYTL 179
Query: 192 ASVLSACSRVTVNGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIE 251
SV S + + + + HG+ IK G + ++ V ++L Y R G + V M
Sbjct: 180 GSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPV 239
Query: 252 KDAVTWNSIIAIYAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKC 311
++ V WN++I AQNG L ++ +M+K + + N +T VL + + L + G+
Sbjct: 240 RNLVAWNTLIMGNAQNGCPETVLYLY-KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ 298
Query: 312 IHDQVIKMDLEESVIVGTSIIDMYCKCGQVDLARKAFNQMKEKNVRSWTAMIAGYGMHCR 371
IH + IK+ V V +S+I MY KCG + A KAF++ ++++ W++MI+ YG H +
Sbjct: 299 IHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQ 358
Query: 372 AREALDLFYKMI-KAGVRPNYITFVSVLSACSHAGLVQEGWHWLNTMGHEFNIEPGVEHY 430
EA++LF M + + N + F+++L ACSH+GL +G + M ++ +PG++HY
Sbjct: 359 GDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHY 418
Query: 431 GCMVDLLGRAGKLKEAYDLIEGMKVKADFVVWGSLLGACRIHKNVDLGEIAAKKLFELEP 490
C+VDLLGRAG L +A +I M +K D V+W +LL AC IHKN ++ + K++ +++P
Sbjct: 419 TCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDP 478
Query: 491 NNCGYHVLLSNIYANAGRWEDVERTRSLMKNRRLAKTPGFSLVELRGKVHAFLVGDKEHP 550
N+ +VLL+N++A+A RW DV R M+++ + K G S E +G+VH F +GD+
Sbjct: 479 NDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQS 538
Query: 551 QHEKIYEYLEELNVKLQEVGYVTDMTSVIHDVDQEEKEMTLRIHSEKLA----------- 599
+ ++IY YL+EL ++++ GY D SV+HD+D+EEKE L HSEKLA
Sbjct: 539 KSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEG 598
Query: 600 -------NLRVCGDCHTVIRLISKVVDREIVVRDSKRFHYFKDGLCSCGDYW 644
NLRVC DCH + IS + +REI +RD RFH+F +G CSCGDYW
Sbjct: 599 APIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 180/369 (48%), Gaps = 19/369 (5%)
Query: 24 NLTTLFNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSC 83
N +F++ D+ + +WN++IA L + + E L F M L +P T
Sbjct: 128 NARKVFDEMPDRK-LTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGS 186
Query: 84 SALHDLHSGKQAHQQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVS 143
+ L + G+Q H +G D+ V+S+L MY + G+L D + +P +RN+V+
Sbjct: 187 AGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMP--VRNLVA 244
Query: 144 WTSMLTGYVQNDNAREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTV 203
W +++ G QN L L+K +++ S C + + +VLS+CS + +
Sbjct: 245 WNTLIMGNAQNGCPETVLYLYK--MMKISGCRP----------NKITFVTVLSSCSDLAI 292
Query: 204 NGVTEGAHGFVIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGMIEKDAVTWNSIIAI 263
G + H IK G S V V ++LI Y++ G + + K F ++D V W+S+I+
Sbjct: 293 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 352
Query: 264 YAQNGLAAEALDVFDQMVKSTDVKCNAVTLSAVLLAIAHLGVLRLGKCIHDQVI-KMDLE 322
Y +G EA+++F+ M + T+++ N V +L A +H G+ G + D ++ K +
Sbjct: 353 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 412
Query: 323 ESVIVGTSIIDMYCKCGQVDLARKAFNQMKEK-NVRSWTAMIAGYGMHCRAREALDLFYK 381
+ T ++D+ + G +D A M K ++ W +++ +H A A +F +
Sbjct: 413 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 472
Query: 382 MIKAGVRPN 390
+++ + PN
Sbjct: 473 ILQ--IDPN 479
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 126/277 (45%), Gaps = 27/277 (9%)
Query: 37 NVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHDLHSGKQAH 96
N+ +WN++I A+ G L + M+ P + TF + SCS L G+Q H
Sbjct: 241 NLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIH 300
Query: 97 QQAFIFGFHRDVFVSSALIDMYSKCGELSDARKLFDEIPQRIRNIVSWTSMLTGYVQNDN 156
+A G V V S+LI MYSKCG L DA K F E + + V W+SM++ Y +
Sbjct: 301 AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE--REDEDEVMWSSMISAYGFHGQ 358
Query: 157 AREALLLFKEFLLEESECGGASENSDNVFVDSVAIASVLSACSRVTVNGVTEGAHGF--- 213
EA+ LF + E++ N+ ++ VA ++L ACS + +G F
Sbjct: 359 GDEAIELFNT-MAEQT----------NMEINEVAFLNLLYACSHSGLK--DKGLELFDMM 405
Query: 214 VIKRGFDSEVGVGNTLIDAYARGGHVDVSRKVFDGM-IEKDAVTWNSIIAIYAQNGLAAE 272
V K GF + ++D R G +D + + M I+ D V W ++++ + A
Sbjct: 406 VEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEM 465
Query: 273 ALDVFDQMVK--STDVKCNAVTLSAVLLAIAHLGVLR 307
A VF ++++ D C VLLA H R
Sbjct: 466 AQRVFKEILQIDPNDSAC------YVLLANVHASAKR 496
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,641,430
Number of Sequences: 539616
Number of extensions: 9594019
Number of successful extensions: 34055
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 26172
Number of HSP's gapped (non-prelim): 2064
length of query: 644
length of database: 191,569,459
effective HSP length: 124
effective length of query: 520
effective length of database: 124,657,075
effective search space: 64821679000
effective search space used: 64821679000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)