BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006461
(644 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C671|P4K2B_ARATH Probable phosphatidylinositol 4-kinase type 2-beta At1g26270
OS=Arabidopsis thaliana GN=At1g26270 PE=1 SV=1
Length = 630
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/646 (69%), Positives = 531/646 (82%), Gaps = 18/646 (2%)
Query: 1 MSRKLDSPVQTQMAVAVFKTPLSGEYHGNKRVEGKQPAGRRRVFVQTETGCVLGMDLDRS 60
MSRKLDSP++TQMAVA+ K+PL+GE+ +V K P GRRRVFVQTETGCVLG++LDRS
Sbjct: 1 MSRKLDSPIKTQMAVALVKSPLNGEFREFNKVGMKTPVGRRRVFVQTETGCVLGLELDRS 60
Query: 61 DNAHTVKRRLQLALNVPTDESSLTFGDMVLKNDLSAVRNDSPLLLTRNYLHRSSSTPCLS 120
DNAHTVKR+LQ+ALN P +ESSLTFGD+VLKNDL+AVR+DSPLLLTRN HRSSSTPCLS
Sbjct: 61 DNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLTAVRSDSPLLLTRNNFHRSSSTPCLS 120
Query: 121 PRGNDIQQR-DRSGPIEILGQSDCFAITKKMVKDIVKAIKMGVDPIPVNGGLGGAYYFRN 179
P D+QQR D S PIEILG S F+ ++M KDI KA+K G+DP+ VN GLGGAYYF+N
Sbjct: 121 PMRADLQQRRDESSPIEILGNSVSFSFVRQMAKDITKAVKKGIDPVAVNSGLGGAYYFKN 180
Query: 180 SRFENVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRSVRVGETGIREVAAYLLDHDHFA 239
SR E+VAIVKPTDEEP+APNNPKGFVGKALGQPGLKRSVRVGETG REVAAYLLD +HFA
Sbjct: 181 SRGESVAIVKPTDEEPYAPNNPKGFVGKALGQPGLKRSVRVGETGYREVAAYLLDKEHFA 240
Query: 240 NVPPTALVKIRHSIFNINDGVNGHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSFPVSE 299
NVPPTALVKI HSIFN+NDGV K K LVSKIAS QQFI H++DAS+HGTS+FPVS
Sbjct: 241 NVPPTALVKITHSIFNVNDGVKASKPMEKMLVSKIASLQQFIPHDYDASEHGTSNFPVSA 300
Query: 300 VHHIGILDIRIFNTDRHAGNLLVRKLDGVGSFGQVELIPIDHGLCLPETLEDPYFEWIHW 359
VH IGILDIRI NTDRH+GNLLV+KLDG G FGQVEL+PIDHGLCLPETLEDPYFEWIHW
Sbjct: 301 VHRIGILDIRILNTDRHSGNLLVKKLDGDGMFGQVELVPIDHGLCLPETLEDPYFEWIHW 360
Query: 360 PQASIPFSDDELEYIRKLDPLSDCEMLRRELPMIREACLRVLVLCTIFLKEAAEFGLCLS 419
PQASIPFS+DEL+YI LDPL DCEMLRRELPM+REA LRVLVLCTIFLKEAA GLCL+
Sbjct: 361 PQASIPFSEDELKYIANLDPLGDCEMLRRELPMVREASLRVLVLCTIFLKEAAANGLCLA 420
Query: 420 EIGEMMSREFRAGEEEPSELEVVCIEARRLVEEREKEVLSPKADAG-DEDFLFDLDCEDA 478
EIGEMM+RE R G+EEPSE+EVVC+EA L+ E++ E SP++D G D +F FD+DCE+
Sbjct: 421 EIGEMMTREVRPGDEEPSEIEVVCLEAMSLIGEKDAE--SPRSDLGNDIEFQFDIDCEEV 478
Query: 479 AFDFTPKMAADDYMSRAQFHLGIGFGNGRFALSKLDESIEELEESEGEEEQEGFSTLPAP 538
D T K+A LG+ FGN R LSK++E+ E+ EE E E+ +E +
Sbjct: 479 T-DCTKKLA---------LPLGLTFGNARGQLSKVEETTEDGEEEEEEDREEEENDRADL 528
Query: 539 ERIPSISKLSMSLKTTCLGDKNQKYQKFSGSKPENGCLSNTSSGHRSANEQLPACVSFVK 598
E++P+I KLSMSLK+T LG+K+QKYQK G++ E+ + SS HRSA+EQ+P+ SFVK
Sbjct: 529 EKMPTI-KLSMSLKSTLLGEKSQKYQKHPGARVES---AYASSAHRSADEQIPSSTSFVK 584
Query: 599 LADLGEDEWTLFLEKFQELLYPAFAARKSVTVGLRQRQRLGTSCQF 644
L+D+ E+EWT+FLEK+QELLYPA RKS+T+G +QRQRLGTSCQF
Sbjct: 585 LSDMSEEEWTIFLEKYQELLYPAIEKRKSITLGQKQRQRLGTSCQF 630
>sp|Q8TCG2|P4K2B_HUMAN Phosphatidylinositol 4-kinase type 2-beta OS=Homo sapiens GN=PI4K2B
PE=1 SV=1
Length = 481
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 124/286 (43%), Gaps = 56/286 (19%)
Query: 156 KAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKG--FVGKALGQPG 213
+AI++G+ P ++ G G+Y+ ++ + + + + KP EEP+ NPK +V K
Sbjct: 115 QAIEVGIFPERISQGSSGSYFVKDPKRKIIGVFKPKSEEPYGQLNPKWTKYVHKVCCPCC 174
Query: 214 LKRSVRVGETG-IREVAAYLLDHD-HFANVPPTALVKIRHSIFNIN--DGVN-------- 261
R + G + E AYL+D+ H + VP T +V + FN N D
Sbjct: 175 FGRGCLIPNQGYLSEAGAYLVDNKLHLSIVPKTKVVWLVSETFNYNAIDRAKSRGKKYAL 234
Query: 262 ------GHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSFPV------------SEVHHI 303
G K H L KI SFQ F++ + +++ F S+ +
Sbjct: 235 EKVPKVGRKFHRIGLPPKIGSFQLFVE-GYKEAEYWLRKFEADPLPENIRKQFQSQFERL 293
Query: 304 GILDIRIFNTDRHAGNLLVR--------KLDGVGSFG------QVELIPIDHGLCLPETL 349
ILD I NTDR N LVR ++D S +++ ID+GL P
Sbjct: 294 VILDYIIRNTDRGNDNWLVRYEKQKCEKEIDHKESKWIDDEEFLIKIAAIDNGLAFPFKH 353
Query: 350 EDPY----FEWIHWPQASIPFSDD----ELEYIRKLDPLSD-CEML 386
D + F W PQA +PFS++ L YI ++ + D CE L
Sbjct: 354 PDEWRAYPFHWAWLPQAKVPFSEEIRNLILPYISDMNFVQDLCEDL 399
>sp|Q8CBQ5|P4K2B_MOUSE Phosphatidylinositol 4-kinase type 2-beta OS=Mus musculus GN=Pi4k2b
PE=2 SV=1
Length = 469
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 125/294 (42%), Gaps = 62/294 (21%)
Query: 153 DIV----KAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKG--FVG 206
DIV +AI++GV P ++ G G+Y+ ++S+ + + KP EEP+ NPK +V
Sbjct: 96 DIVLKAEQAIEIGVFPERISQGSSGSYFVKDSKRNIIGVFKPKSEEPYGQLNPKWTKYVH 155
Query: 207 KALGQPGLKRSVRVGETG-IREVAAYLLDHD-HFANVPPTALVKIRHSIFNIN--DGVN- 261
K R + G + E AYL+D + VP T +V + FN + D
Sbjct: 156 KVCCPCCFGRGCLLPNQGYLSEAGAYLVDVKLNLGIVPKTKVVWLVSETFNYSAIDRAKS 215
Query: 262 -------------GHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSFPV----------- 297
G K H L K+ SFQ F+K ++ +++ F
Sbjct: 216 RGKKYALEKVPKVGRKFHRIGLPPKVGSFQLFVK-DYKEAEYWLRRFEAEPLPENIRKQF 274
Query: 298 -SEVHHIGILDIRIFNTDRHAGNLLVRKLDGVGSFGQVE---------------LIPIDH 341
S+ + ILD I NTDR N LV K D + ++E + ID+
Sbjct: 275 QSQFEKLVILDYIIRNTDRGNDNWLV-KYDEMKYAKKIESEESNWIDNKQLLIKIAAIDN 333
Query: 342 GLCLPETLEDPY----FEWIHWPQASIPFSDDE----LEYIRKLDPLSD-CEML 386
GL P D + F W PQA +PFS++ L YI ++ + D CE L
Sbjct: 334 GLAFPFKHPDEWRAYPFHWAWLPQAKVPFSEETRNLILPYISDMNFVQDLCEDL 387
>sp|Q5XIL2|P4K2B_RAT Phosphatidylinositol 4-kinase type 2-beta OS=Rattus norvegicus
GN=Pi4k2b PE=2 SV=1
Length = 477
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 121/287 (42%), Gaps = 58/287 (20%)
Query: 156 KAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKG--FVGKALGQPG 213
+AI++GV P ++ G G+Y+ ++S+ + + KP EEP+ NPK +V K
Sbjct: 111 QAIEIGVFPERISQGSSGSYFVKDSKRTIIGVFKPKSEEPYGQLNPKWTKYVHKVCCPCC 170
Query: 214 LKRSVRVGETG-IREVAAYLLDHD-HFANVPPTALVKIRHSIFNIN--DGVN-------- 261
R + G + E AYL+D VP T +V + FN + D
Sbjct: 171 FGRGCLLPNQGYLSEAGAYLVDTKLQLGIVPKTKVVWLVSETFNYSAIDRAKSRGKKYAL 230
Query: 262 ------GHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSFPV------------SEVHHI 303
G K H L KI SFQ F+K ++ +++ F S+ +
Sbjct: 231 EKVPKVGRKFHRIGLPPKIGSFQLFVK-DYKEAEYWLRRFEAEPLPENIRKQFQSQFERL 289
Query: 304 GILDIRIFNTDRHAGNLLVRKLDGVGSFGQVE---------------LIPIDHGLCLPET 348
ILD I NTDR N LV K D + ++E + ID+GL P
Sbjct: 290 VILDYIIRNTDRGNDNWLV-KYDEMKYAKKIESEESNWIDDKQLLIRIAAIDNGLAFPFK 348
Query: 349 LEDPY----FEWIHWPQASIPFSDDE----LEYIRKLDPLSD-CEML 386
D + F W PQA +PFS++ L +I ++ + D CE L
Sbjct: 349 HPDEWRAYPFHWAWLPQAKVPFSEETRNLILPFISDMNFVQDLCEDL 395
>sp|Q505I0|P4K2A_XENTR Phosphatidylinositol 4-kinase type 2-alpha OS=Xenopus tropicalis
GN=pi4k2a PE=2 SV=2
Length = 471
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 113/268 (42%), Gaps = 48/268 (17%)
Query: 149 KMVKDIVKAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKG--FVG 206
++VK KAI + P ++ G G+Y+ +N + E +A+ KP +EEP+ NPK ++
Sbjct: 105 EVVKKAEKAIVRDILPERISQGSSGSYFVKNEQGEIIAVFKPKNEEPYGQLNPKWTKWLQ 164
Query: 207 KALGQPGLKRSVRVGETG-IREVAAYLLDHDHFAN-VPPTALVKIRHSIFNIN--DGVN- 261
K R V G + E A L+D N VP T +V + FN + D V
Sbjct: 165 KLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVFLASETFNYSAIDRVKS 224
Query: 262 -------------GHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSF---PVSE------ 299
G + + L K+ SFQ F+K DA D+ F P+ E
Sbjct: 225 RGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVKGYKDA-DYWLRRFEADPLPENTNRQL 283
Query: 300 ---VHHIGILDIRIFNTDRHAGNLLVR---KLDGVGSFGQ--------VELIPIDHGLCL 345
+ +LD I NTDR N L++ +D + +++ ID+GL
Sbjct: 284 QLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSASARDDWVMVKEPVIKIAAIDNGLAF 343
Query: 346 PETLEDPY----FEWIHWPQASIPFSDD 369
P D + F W PQA I FS +
Sbjct: 344 PLKHPDSWRAYPFYWAWLPQAKIQFSQE 371
>sp|Q08B31|P4K2A_XENLA Phosphatidylinositol 4-kinase type 2-alpha OS=Xenopus laevis
GN=pi4k2a PE=2 SV=1
Length = 469
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 113/268 (42%), Gaps = 48/268 (17%)
Query: 149 KMVKDIVKAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKG--FVG 206
++VK KAI + P ++ G G+Y+ ++ + E +A+ KP +EEP+ NPK ++
Sbjct: 103 EVVKKAEKAIMRDILPERISQGSSGSYFVKDEQGEIIAVFKPKNEEPYGQLNPKWTKWLQ 162
Query: 207 KALGQPGLKRSVRVGETG-IREVAAYLLDHDHFAN-VPPTALVKIRHSIFNIN--DGVN- 261
K R V G + E A L+D N VP T +V + FN + D V
Sbjct: 163 KLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLDLNIVPRTKVVFLASETFNYSAIDRVKS 222
Query: 262 -------------GHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSF---PVSE------ 299
G + + L K+ SFQ F+K DA D+ F P+ E
Sbjct: 223 RGKRLALEKVPKVGQRFNRIGLPPKVGSFQIFVKSYKDA-DYWLRRFEADPLPENTNRQL 281
Query: 300 ---VHHIGILDIRIFNTDRHAGNLLVR---KLDGVGSFGQ--------VELIPIDHGLCL 345
+ +LD I NTDR N L++ +D + +++ ID+GL
Sbjct: 282 QLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSASARDDWVMVKEPVIKIAAIDNGLAF 341
Query: 346 PETLEDPY----FEWIHWPQASIPFSDD 369
P D + F W PQA I FS +
Sbjct: 342 PLKHPDSWRAYPFYWAWLPQAKIQFSQE 369
>sp|Q28G26|P4K2B_XENTR Phosphatidylinositol 4-kinase type 2-beta OS=Xenopus tropicalis
GN=pi4k2b PE=2 SV=1
Length = 492
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 109/273 (39%), Gaps = 55/273 (20%)
Query: 156 KAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKG--FVGKALGQPG 213
+AI+ GV P ++ G G+Y+ ++ + + + + KP EEP+ NPK + K
Sbjct: 122 QAIESGVFPERISQGSSGSYFVKDPKGKIIGVFKPKSEEPYGHLNPKWTKYFHKICCPCC 181
Query: 214 LKRSVRVGETG-IREVAAYLLDHD-HFANVPPTALVKIRHSIFNIN--DGVN-------- 261
R V G + E AYL+D VP T +V + FN + D
Sbjct: 182 FGRGCLVPNQGYLSEAGAYLVDEKLGLGVVPKTKVVWLVSETFNYSAIDRAKSRGKKYAL 241
Query: 262 ------GHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSF---PVSE---------VHHI 303
G K H L K+ SFQ F+ + +D+ F P+ E +
Sbjct: 242 EKVPKVGRKFHRIGLPPKVGSFQLFV-DGYKEADYWLRKFETDPLPENTRKQLQCQFEKL 300
Query: 304 GILDIRIFNTDRHAGNLLVR----KLDGVGSFGQ--------------VELIPIDHGLCL 345
ILD I NTDR N L+R D + G +++ ID+GL
Sbjct: 301 VILDYVIRNTDRGNDNWLIRYDSQDDDELMEKGDDFPLKDWKEIKEPVIKIAAIDNGLAF 360
Query: 346 PETLEDPY----FEWIHWPQASIPFSDDELEYI 374
P D + F W PQA +PFS + + I
Sbjct: 361 PFKHPDEWRAYPFHWAWLPQAKVPFSQETRDLI 393
>sp|Q6DCQ8|P4K2B_XENLA Phosphatidylinositol 4-kinase type 2-beta OS=Xenopus laevis
GN=pi4k2b PE=2 SV=1
Length = 495
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 114/286 (39%), Gaps = 57/286 (19%)
Query: 156 KAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKG--FVGKALGQPG 213
+AI+ GV P ++ G G+Y+ ++ + + + + KP EEP+ NPK + K
Sbjct: 125 QAIESGVFPERISQGSSGSYFVKDPKGKIIGVFKPKSEEPYGHLNPKWTKYFHKICCPCC 184
Query: 214 LKRSVRVGETG-IREVAAYLLDHD-HFANVPPTALVKIRHSIFNIN--DGVN-------- 261
R V G + E AYL+D VP T V + FN + D
Sbjct: 185 FGRGCLVPNQGYLSEAGAYLVDEKLGLGVVPKTKAVWLVSETFNYSAIDRAKSRGKKYAL 244
Query: 262 ------GHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSF---PVSE---------VHHI 303
G K H L K+ SFQ F+ + +D+ F P+ E +
Sbjct: 245 EKVPKVGKKFHRIGLPPKVGSFQLFV-DGYKEADYWLRKFETDPLPENTRKQLQSPFEKL 303
Query: 304 GILDIRIFNTDRHAGNLLVR----KLDGVGSFGQ--------------VELIPIDHGLCL 345
ILD I NTDR N L+R D + G +++ ID+GL
Sbjct: 304 VILDYVIRNTDRGNDNWLIRYDSQDDDELSEKGDSFPLKDWKEIKEPIIKIAAIDNGLAF 363
Query: 346 PETLEDPY----FEWIHWPQASIPFSDDELEYIRKLDPLSDCEMLR 387
P D + F W PQA +PFS + + I L +SD ++
Sbjct: 364 PFKHPDEWRAYPFHWAWLPQAKVPFSQETRDLI--LPRISDMNFIQ 407
>sp|Q5ZIK0|P4K2B_CHICK Phosphatidylinositol 4-kinase type 2-beta OS=Gallus gallus
GN=PI4K2B PE=2 SV=1
Length = 479
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 53/265 (20%)
Query: 156 KAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKG--FVGKALGQPG 213
+ I+ GV P ++ G G+Y+ ++ + + + + KP EEP+ NPK + K
Sbjct: 113 QVIECGVLPERISQGSSGSYFVKDCKGKTIGVFKPKSEEPYGHLNPKWTKYFHKICCPCC 172
Query: 214 LKRSVRVGETG-IREVAAYLLDHD-HFANVPPTALVKIRHSIFNINDGVNGHKTHNKN-- 269
R V G + E AYL+D VP T +V + FN + ++ K+ K
Sbjct: 173 FGRGCLVPNQGYLSEAGAYLVDDKLGLGVVPKTKVVWLVSETFNYS-AIDRAKSRGKKYA 231
Query: 270 ---------------LVSKIASFQQFIKHNFDASDHGTSSFPV------------SEVHH 302
L K+ SFQ F++ + +D+ F S+
Sbjct: 232 LEKVPKVAKKFNRIGLPPKVGSFQLFVE-GYKEADYWLRKFETDPLPENTRKEFQSQFER 290
Query: 303 IGILDIRIFNTDRHAGNLLVR---KLDG-----------VGSFGQVELIPIDHGLCLPET 348
+ ILD I NTDR N LVR + DG V +++ ID+GL P
Sbjct: 291 LVILDYVIRNTDRGNDNWLVRYEKQDDGLNLSDKDIQWTVTEESTIKIAAIDNGLAFPFK 350
Query: 349 LEDPY----FEWIHWPQASIPFSDD 369
D + F W QA +PFS +
Sbjct: 351 HPDEWRAYPFHWAWLSQAQVPFSQE 375
>sp|Q49GP5|P4K2B_DANRE Phosphatidylinositol 4-kinase type 2-beta OS=Danio rerio GN=pi4k2b
PE=2 SV=1
Length = 501
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 118/288 (40%), Gaps = 52/288 (18%)
Query: 149 KMVKDIVKAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKG--FVG 206
++++ +AI+ GV P ++ G G+Y+ ++ + + + + KP EEP+ NPK +
Sbjct: 129 EIIQRAEQAIENGVFPERISQGSSGSYFVKDPKGKIIGVFKPKSEEPYGHLNPKWTKYFH 188
Query: 207 KALGQPGLKRSVRVGETG-IREVAAYLLDHD-HFANVPPTALVKIRHSIFNIN--DGVN- 261
K R + G + E AA L+D VP T +V + F+ N D
Sbjct: 189 KVCCPCCFGRGCLIPNQGYLSEAAASLVDQKLGLWIVPKTKVVHLASETFHYNAIDRAKS 248
Query: 262 -------------GHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSFPV----------- 297
G + H L K+ SFQ F++ + +D F
Sbjct: 249 RGKKYALEKVPKVGRRFHRVGLPPKVGSFQLFVE-GYHEADFWLRKFEAEPLPENMRKQL 307
Query: 298 -SEVHHIGILDIRIFNTDRHAGNLLVR-KLDGVGSFGQ------------VELIPIDHGL 343
S+ + +LD I NTDR N L++ + G G + +++ ID+GL
Sbjct: 308 QSQFERLVVLDYVIRNTDRGNDNWLIKYEKPGDGELTEKESEWTDPKDSAIKIAAIDNGL 367
Query: 344 CLPETLEDPY----FEWIHWPQASIPFSDDELEYIRKLDPLSDCEMLR 387
P D + F W PQA + FS + + + L +SD ++
Sbjct: 368 AFPFKHPDEWRAYPFHWAWLPQAKVAFSQETRDLV--LSRISDMNFVQ 413
>sp|Q2TBE6|P4K2A_MOUSE Phosphatidylinositol 4-kinase type 2-alpha OS=Mus musculus
GN=Pi4k2a PE=1 SV=1
Length = 479
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 111/268 (41%), Gaps = 49/268 (18%)
Query: 150 MVKDIVKAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKG--FVGK 207
+V+ AI+ + P + G G+Y+ ++S+ VA+ KP +EEP+ NPK ++ K
Sbjct: 113 VVRQAEVAIECSIYPERIYQGSSGSYFVKDSQGRIVAVFKPKNEEPYGHLNPKWTKWLQK 172
Query: 208 ALGQPGLKRSVRVGETG-IREVAAYLLDHDHFAN-VPPTALVKIRHSIFNIN--DGVN-- 261
R V G + E A L+D N VP T +V + FN + D V
Sbjct: 173 LCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYSAIDRVKSR 232
Query: 262 ------------GHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSF---PVSE------- 299
G + + L K+ SFQ F++ DA D+ F P+ E
Sbjct: 233 GKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDA-DYWLRRFEAEPLPENTNRQLL 291
Query: 300 --VHHIGILDIRIFNTDRHAGNLLV-----------RKLDGVGSFGQV-ELIPIDHGLCL 345
+ +LD I NTDR N L+ R D V V ++ ID+GL
Sbjct: 292 LQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDNSSCRDTDWVMVREPVIKVAAIDNGLAF 351
Query: 346 PETLEDPY----FEWIHWPQASIPFSDD 369
P D + F W PQA +PFS +
Sbjct: 352 PLKHPDSWRAYPFYWAWLPQAKVPFSQE 379
>sp|Q6PE18|P4K2A_DANRE Phosphatidylinositol 4-kinase type 2-alpha OS=Danio rerio GN=pi4k2a
PE=2 SV=1
Length = 447
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 113/270 (41%), Gaps = 49/270 (18%)
Query: 148 KKMVKDIVKAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKG--FV 205
+++++ +AI+ G+ P + G G+Y+ ++S + + + KP +EEP+ NPK ++
Sbjct: 79 REIIRKAERAIEEGIYPERIYQGSSGSYFVKDSAGKIIGVFKPKNEEPYGQLNPKWTKWL 138
Query: 206 GKALGQPGLKRSVRVGETG-IREVAAYLLDHDHFAN-VPPTALVKIRHSIFNIN--DGVN 261
K R V G + E A L+D N VP T +V + FN + D V
Sbjct: 139 QKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYSAIDRVK 198
Query: 262 --------------GHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSF---PVSE----- 299
G + H L K+ SFQ F++ DA D F P+ E
Sbjct: 199 SRGKRLALEKVPKVGQRFHRIGLPPKVGSFQIFVEGYKDA-DFWLRRFEAEPLPENTNRQ 257
Query: 300 ----VHHIGILDIRIFNTDRHAGNLLVR---KLDGVGSFGQ---------VELIPIDHGL 343
+ +LD I NTDR N L++ +D + ++L ID+GL
Sbjct: 258 LQLQFERLVVLDYIIRNTDRGNDNWLIKYDYPMDTSSNRDSDWVLVKDPIIKLAAIDNGL 317
Query: 344 CLPETLEDPY----FEWIHWPQASIPFSDD 369
P D + F W PQA + FS +
Sbjct: 318 AFPLKHPDSWRAYPFYWAWLPQAKVVFSQE 347
>sp|Q9UT42|LSB6_SCHPO Phosphatidylinositol 4-kinase lsb6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=lsb6 PE=3 SV=2
Length = 624
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 149 KMVKDIVKAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKG--FVG 206
+++ +AI GV P+ ++ G G+Y+ +N +N+A+ KP DEEP+ NPK +
Sbjct: 133 RLLDATKEAIAHGVFPVLISKGSSGSYFVKNKVQKNIAVFKPKDEEPYGKLNPKWTKWFH 192
Query: 207 KALGQPGLKRSVRVGETG-IREVAAYLLDHD-HFANVPPTALVKIRHSIFNIND-GVNGH 263
+ L RS + T + E AA +LD VP T++ I FN +
Sbjct: 193 RNLFPCFFGRSCLIPNTSYLSEAAACVLDRGLGLYLVPYTSVASISSPTFNYDYFARKAF 252
Query: 264 KTHNKNLVSKIASFQQFI 281
T NK L K SFQQF+
Sbjct: 253 LTRNKPLPEKTGSFQQFL 270
>sp|Q99M64|P4K2A_RAT Phosphatidylinositol 4-kinase type 2-alpha OS=Rattus norvegicus
GN=Pi4k2a PE=1 SV=1
Length = 478
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 111/268 (41%), Gaps = 49/268 (18%)
Query: 150 MVKDIVKAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKG--FVGK 207
+V+ AI+ + P + G G+Y+ ++S+ +A+ KP +EEP+ NPK ++ K
Sbjct: 112 VVRQAEIAIECSIYPERIYQGSSGSYFVKDSQGRIIAVFKPKNEEPYGNLNPKWTKWLQK 171
Query: 208 ALGQPGLKRSVRVGETG-IREVAAYLLDHDHFAN-VPPTALVKIRHSIFNIN--DGVN-- 261
R V G + E A L+D N VP T +V + FN + D V
Sbjct: 172 LCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYSAIDRVKSR 231
Query: 262 ------------GHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSF---PVSE------- 299
G + + L K+ SFQ F++ DA D+ F P+ E
Sbjct: 232 GKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDA-DYWLRRFEAEPLPENTNRQLL 290
Query: 300 --VHHIGILDIRIFNTDRHAGNLLV-----------RKLDGVGSFGQV-ELIPIDHGLCL 345
+ +LD I NTDR N L+ R D V V ++ ID+GL
Sbjct: 291 LQFERLVVLDYIIRNTDRGNDNWLIKYDYPMDNPNCRDTDWVMVREPVIKVAAIDNGLAF 350
Query: 346 PETLEDPY----FEWIHWPQASIPFSDD 369
P D + F W PQA +PFS +
Sbjct: 351 PLKHPDSWRAYPFYWAWLPQAKVPFSQE 378
>sp|Q9BTU6|P4K2A_HUMAN Phosphatidylinositol 4-kinase type 2-alpha OS=Homo sapiens
GN=PI4K2A PE=1 SV=1
Length = 479
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 111/268 (41%), Gaps = 49/268 (18%)
Query: 150 MVKDIVKAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKG--FVGK 207
+V+ AI+ + P + G G+Y+ ++ + +A+ KP +EEP+ NPK ++ K
Sbjct: 113 VVRQAELAIERCIFPERIYQGSSGSYFVKDPQGRIIAVFKPKNEEPYGHLNPKWTKWLQK 172
Query: 208 ALGQPGLKRSVRVGETG-IREVAAYLLDHDHFAN-VPPTALVKIRHSIFNIN--DGVN-- 261
R V G + E A L+D N VP T +V + FN + D V
Sbjct: 173 LCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYSAIDRVKSR 232
Query: 262 ------------GHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSF---PVSE------- 299
G + + L K+ SFQ F++ DA D+ F P+ E
Sbjct: 233 GKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDA-DYWLRRFEAEPLPENTNRQLL 291
Query: 300 --VHHIGILDIRIFNTDRHAGNLLVR---KLDGVGSFGQ---------VELIPIDHGLCL 345
+ +LD I NTDR N L++ +D S +++ ID+GL
Sbjct: 292 LQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTDWVVVKEPVIKVAAIDNGLAF 351
Query: 346 PETLEDPY----FEWIHWPQASIPFSDD 369
P D + F W PQA +PFS +
Sbjct: 352 PLKHPDSWRAYPFYWAWLPQAKVPFSQE 379
>sp|P42951|LSB6_YEAST Phosphatidylinositol 4-kinase LSB6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=LSB6 PE=1 SV=1
Length = 607
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 150 MVKDIVKAIK-MGVDPIPVNGGLGGAYYFRNSRFEN---VAIVKPTDEEPFAPNNPKG-- 203
+V D ++A++ G + + G G+Y+ +R + V + KP DEEP+ P +PK
Sbjct: 149 LVSDCIEAVETFGRELERIQTGSSGSYFVYGTRADESVPVGVFKPKDEEPYGPFSPKWTK 208
Query: 204 FVGKALGQPGLKRSVRVGETG-IREVAAYLLD---HDHFANVPPTALVKIRHSIFNINDG 259
+ + RS + G I E AA LLD H TA ++ + N
Sbjct: 209 WAHRTFFPCLFGRSCLIPNLGYICESAASLLDRRLETHLVPYTDTASIESFNFYDNRKKW 268
Query: 260 VNGHKTHNKNLVSKIASFQQFIKHNFDASD 289
V G+ K K+ SFQ F+K +A +
Sbjct: 269 VLGYNL-QKKKQKKLGSFQLFLKEYINADE 297
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 285 FDASDHGTSSFPVSEVHHIGILDIRIFNTDRHAGNLLVRKLDGVGSFGQVELIPIDHGLC 344
F+ ++ S F + E+ + ILD + NTDR N +V+ + + +++L ID+GL
Sbjct: 359 FEWTESSLSQFRL-ELEKLIILDYIMRNTDRGLDNWMVKLIKLSNNKWRLKLAAIDNGLS 417
Query: 345 LPETLEDPY----FEWIHWPQASI--PFSD 368
P D + + W++ P + PFS+
Sbjct: 418 FPWKHPDEWRLYPYGWLYLPLQLLAKPFSE 447
>sp|P69200|RL40_LEITA Ubiquitin-60S ribosomal protein L40 OS=Leishmania tarentolae
GN=UB-EP52 PE=3 SV=2
Length = 128
Score = 37.0 bits (84), Expect = 0.43, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLK 91
++FV+T TG + ++++ SD VK ++Q +P D+ L F D L+
Sbjct: 2 QIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLE 51
>sp|Q7NNH3|CPXT1_GLOVI Chromophore lyase CpcT/CpeT 1 OS=Gloeobacter violaceus (strain PCC
7421) GN=cpcT1 PE=3 SV=1
Length = 229
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 531 GFSTLPAPERIPSISKLSMSLKTTCLGDKNQKYQKFSGSKPENGCLSNTSSGHRSANE 588
G PA ER+ I+ +++ TC Q K+ G+ PE GC SN R NE
Sbjct: 137 GLCAKPAAERL--IAPMALDGDPTCTVRLVQAGDKYMGTTPEGGCQSNVRGAARITNE 192
>sp|P22589|UBIQP_PHYIN Polyubiquitin OS=Phytophthora infestans PE=1 SV=2
Length = 229
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + +D++ SD+ VK+++Q +P D+ L F
Sbjct: 75 GGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFA 122
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + +D++ SD+ VK+++Q +P D+ L F
Sbjct: 151 GGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFA 198
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
++FV+T TG + +D++ SD+ VK+++Q +P D+ L F
Sbjct: 2 QIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFA 46
>sp|P23324|UBIQP_EUPEU Polyubiquitin OS=Euplotes eurystomus PE=3 SV=2
Length = 229
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + +D+++SD VK ++Q +P D+ L F
Sbjct: 75 GGMQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFA 122
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + +D+++SD VK ++Q +P D+ L F
Sbjct: 151 GGMQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFA 198
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
++FV+T TG + +D+++SD VK ++Q +P D+ L F
Sbjct: 2 QIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFA 46
>sp|P14794|RL40_DICDI Ubiquitin-60S ribosomal protein L40 OS=Dictyostelium discoideum
GN=ubqB PE=1 SV=2
Length = 128
Score = 35.0 bits (79), Expect = 1.6, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
++FV+T TG + ++++ SDN VK ++Q +P D+ L F L++
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0CG76|UBIQA_DICDI Polyubiquitin-A OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1
Length = 381
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 75 GGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIF 121
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 151 GGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIF 197
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 303 GGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIF 349
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 227 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 273
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 45
>sp|P0CG77|UBIQD_DICDI Polyubiquitin-D OS=Dictyostelium discoideum GN=ubqD PE=1 SV=1
Length = 229
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 75 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 121
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 151 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 197
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 45
>sp|P0CG88|UBIQJ_DICDI Polyubiquitin-J OS=Dictyostelium discoideum GN=ubqJ PE=1 SV=1
Length = 305
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 75 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 121
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 151 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 197
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 227 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 273
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 45
>sp|P0CG80|UBIQI_DICDI Polyubiquitin-I OS=Dictyostelium discoideum GN=ubqI PE=1 SV=1
Length = 305
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 75 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 121
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 151 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 197
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 227 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 273
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 45
>sp|P0CG79|UBIQG_DICDI Polyubiquitin-G OS=Dictyostelium discoideum GN=ubqG PE=1 SV=1
Length = 381
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 75 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 121
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 151 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 197
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 227 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 273
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 303 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 349
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 45
>sp|P0CG78|UBIQF_DICDI Polyubiquitin-F OS=Dictyostelium discoideum GN=ubqF PE=1 SV=1
Length = 533
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 75 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 121
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 151 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 197
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 227 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 273
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 303 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 349
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 379 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 425
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 455 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 501
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 45
>sp|P0CG81|UBIQH_DICDI Polyubiquitin-H OS=Dictyostelium discoideum GN=ubqH PE=1 SV=1
Length = 381
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 75 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 121
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 151 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 197
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 227 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 273
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 45
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTF 85
G ++FV+T TG + ++++ SDN VK ++Q +P D+ L F
Sbjct: 303 GGMQIFVKTLTGKTITLEVECSDNIENVKAKIQDKEGIPPDQQRLIF 349
>sp|P14797|RS27A_DICDI Ubiquitin-40S ribosomal protein S27a OS=Dictyostelium discoideum
GN=ubqC PE=1 SV=2
Length = 154
Score = 35.0 bits (79), Expect = 1.9, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
++F++T TG + ++++ SDN VK ++Q +P D+ L F L++
Sbjct: 2 QIFIKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0DJ25|RL40_TETTS Ubiquitin-60S ribosomal protein L40 OS=Tetrahymena thermophila
(strain SB210) GN=RPL40 PE=1 SV=1
Length = 129
Score = 34.7 bits (78), Expect = 2.3, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
++FV+T TG + +D++ SD VK ++Q +P D+ L F L++
Sbjct: 2 QIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P33190|RL40_TETPY Ubiquitin-60S ribosomal protein L40 OS=Tetrahymena pyriformis
GN=TUF11 PE=3 SV=2
Length = 129
Score = 34.7 bits (78), Expect = 2.3, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
++FV+T TG + +D++ SD VK ++Q +P D+ L F L++
Sbjct: 2 QIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0CG82|UBIQP_TETPY Polyubiquitin OS=Tetrahymena pyriformis GN=TU20 PE=3 SV=1
Length = 381
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + +D++ SD VK ++Q +P D+ L F
Sbjct: 75 GGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFA 122
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + +D++ SD VK ++Q +P D+ L F
Sbjct: 151 GGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFA 198
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + +D++ SD VK ++Q +P D+ L F
Sbjct: 227 GGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFA 274
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + +D++ SD VK ++Q +P D+ L F
Sbjct: 303 GGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFA 350
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
++FV+T TG + +D++ SD VK ++Q +P D+ L F
Sbjct: 2 QIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFA 46
>sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A OS=Caenorhabditis elegans GN=ubq-1 PE=2 SV=1
Length = 838
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKNDLSAVR 98
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F L+
Sbjct: 759 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE------- 811
Query: 99 NDSPLLLTRNYLHRSSSTPCLSPRGNDI 126
D L N S+ L RG DI
Sbjct: 812 -DGRTLSDYNIQKESTLHLVLRLRGGDI 838
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 75 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 122
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 151 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 198
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 227 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 274
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 303 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 350
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 455 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 502
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 531 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 578
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 607 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 654
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 683 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 730
>sp|P49633|RL40_ACACA Ubiquitin-60S ribosomal protein L40 OS=Acanthamoeba castellanii
PE=2 SV=2
Length = 128
Score = 34.7 bits (78), Expect = 2.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
++FV+T TG + ++++ SD VK+++Q +P D+ L F L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P42739|UBIQP_ACECL Polyubiquitin (Fragment) OS=Acetabularia cliftonii PE=3 SV=2
Length = 423
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKNDLS 95
G ++FV+T TG + +++ SD VK ++Q +P D+ L F L++ L+
Sbjct: 40 GGMQIFVKTLTGKTITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLT 96
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 116 GGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFA 163
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 192 GGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFA 239
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 268 GGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFA 315
Score = 32.7 bits (73), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ + F
Sbjct: 344 GGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRIIFA 391
>sp|P46575|RL40_EIMBO Ubiquitin-60S ribosomal protein L40 OS=Eimeria bovis PE=2 SV=2
Length = 129
Score = 34.3 bits (77), Expect = 2.9, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
++FV+T TG + +D++ SD VK ++Q +P D+ L F L++
Sbjct: 2 QIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|Q9HL99|SYT_THEAC Threonine--tRNA ligase OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thrS PE=3 SV=1
Length = 660
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 17/122 (13%)
Query: 6 DSPVQTQMAVAVFKTPLSGEYHGNKRVEGKQPAGRRRVFVQTETGCVLGMDLDRSDNAHT 65
D PV+ V++ SGE G R R F Q + L MD
Sbjct: 334 DLPVRYSEPGTVYRYEKSGEVGG---------LTRPRAFTQDDGHAFLRMD--------Q 376
Query: 66 VKRRLQLALNVPTDESSLTFGDMVLKNDLSAVRNDSPLLLTRNYLHRSSSTPCLSPRGND 125
+ ++ L + D ++ FG++ L DLS + D P +Y+ R+ RG D
Sbjct: 377 IGDEIRTLLTMVKDVFTILFGNIELSFDLSVIDRDHPENYLVSYVCRNCGYRIEGARGTD 436
Query: 126 IQ 127
I+
Sbjct: 437 IE 438
>sp|P0CH27|RL402_TRYCR Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi PE=2 SV=1
Length = 356
Score = 33.9 bits (76), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 75 GGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFA 122
Score = 33.9 bits (76), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 151 GGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFA 198
Score = 33.9 bits (76), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 227 GGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFA 274
Score = 33.5 bits (75), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 2 QIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFA 46
>sp|P0C224|RL40_NEUCR Ubiquitin-60S ribosomal protein L40 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=ubi-1 PE=1 SV=2
Length = 128
Score = 33.9 bits (76), Expect = 4.3, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
++FV+T TG + ++++ SD VK+++Q +P D+ L F L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0CG83|UBIQP_HORVU Polyubiquitin (Fragment) OS=Hordeum vulgare PE=2 SV=1
Length = 171
Score = 33.9 bits (76), Expect = 4.3, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F L++
Sbjct: 17 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 70
Score = 33.9 bits (76), Expect = 4.3, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F L++
Sbjct: 93 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 146
>sp|P21899|RL40_TRYBB Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma brucei brucei
PE=2 SV=2
Length = 128
Score = 33.9 bits (76), Expect = 4.5, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 2 QIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 46
>sp|P69061|RS27A_KLULA Ubiquitin-40S ribosomal protein S27a OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=ubi3 PE=1 SV=2
Length = 150
Score = 33.5 bits (75), Expect = 5.0, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
++FV+T TG + ++++ SD VK ++Q +P D+ L F L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0CG70|UBI4P_NEUCR Polyubiquitin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=ubi-4 PE=1 SV=1
Length = 305
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK+++Q +P D+ L F
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFA 122
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK+++Q +P D+ L F
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFA 198
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
G ++FV+T TG + ++++ SD VK+++Q +P D+ L F
Sbjct: 227 GGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFA 274
Score = 33.1 bits (74), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
++FV+T TG + ++++ SD VK+++Q +P D+ L F
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFA 46
>sp|P27923|RS27A_MAIZE Ubiquitin-40S ribosomal protein S27a OS=Zea mays GN=UBF9 PE=2
SV=2
Length = 155
Score = 33.5 bits (75), Expect = 5.2, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
++FV+T TG + ++++ SD VK ++Q +P D+ L F L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0CG86|RS271_HORVU Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare GN=MUB1
PE=3 SV=1
Length = 155
Score = 33.5 bits (75), Expect = 5.2, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
++FV+T TG + ++++ SD VK ++Q +P D+ L F L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P62981|RS27A_SOLTU Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum GN=UBI3
PE=2 SV=2
Length = 156
Score = 33.5 bits (75), Expect = 5.3, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
++FV+T TG + ++++ SD VK ++Q +P D+ L F L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P62980|RS27A_SOLLC Ubiquitin-40S ribosomal protein S27a OS=Solanum lycopersicum
GN=UBI3 PE=3 SV=2
Length = 156
Score = 33.5 bits (75), Expect = 5.3, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
++FV+T TG + ++++ SD VK ++Q +P D+ L F L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P69201|RL40_LEIMA Ubiquitin-60S ribosomal protein L40 OS=Leishmania major
GN=UB-EP52 PE=3 SV=2
Length = 128
Score = 33.5 bits (75), Expect = 5.5, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFG 86
++FV+T TG + ++++ SD VK ++Q +P D+ L F
Sbjct: 2 QIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46
>sp|P62972|UBIQP_XENLA Polyubiquitin (Fragment) OS=Xenopus laevis PE=1 SV=2
Length = 167
Score = 33.5 bits (75), Expect = 5.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F L++
Sbjct: 14 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 67
Score = 33.5 bits (75), Expect = 5.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 39 GRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
G ++FV+T TG + ++++ SD VK ++Q +P D+ L F L++
Sbjct: 90 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 143
>sp|P0C032|RUB3_ORYSJ Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sativa
subsp. japonica GN=RUB3 PE=3 SV=2
Length = 154
Score = 33.5 bits (75), Expect = 5.9, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKN 92
++FV+T TG + ++++ SD VK ++Q +P D+ L F L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLED 52
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 249,763,624
Number of Sequences: 539616
Number of extensions: 11288228
Number of successful extensions: 29521
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 29071
Number of HSP's gapped (non-prelim): 429
length of query: 644
length of database: 191,569,459
effective HSP length: 124
effective length of query: 520
effective length of database: 124,657,075
effective search space: 64821679000
effective search space used: 64821679000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)